Psyllid ID: psy15165

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600------
Protein Sequence
DYDDDWNNLDDHVGKPSRRRSLGVESSVPKLKIKTETDDKSWEDKSLLEPEIKIKVEQGQATTSDETEEDDNTRQTSFKTIISKYVGYNIDDLNTIDKRAKRTARAASSGSDTPKKRRGRSRSKGRDAPVSRKRNRRAKTPSQEETDAKILQQQKNLEKKIKKMAKEERRRKIDLDKKPSDMDNVFASLDEMSSEEEEEEDWDEIHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCGLGFNFNVSLKNHKQKCSVFLLTESMNSVSGAQGAHALQQQ
Secondary Structure (PSIPRED)
ccHHHHHccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccccEEcccccccccccccEEcEcccccccccccccccEEEEccccEEcEEEEcccccccccccccEEcccccccEcEEEcccccccccccccccEccccccEEEEEEccccccccccccccEEcccccHHEHEEEcccccccccccccccEccccHHHHHHHHHcccccccccccccccccccccEccccHHHHHHHHHHHccccccccccEccccccEEccccHHHHHEEEcccccccccccccccccEccccHHHHHHHHccccccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHccEEHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccEcccccHHEEEEEEccccccccccccccEEcccccHHEHHHHcccccccccccccccEccccHHHEHHHHcccccccccccccccEccccHHHHHHHHcccEccccccccccHccccEccccHHHEHHHHccccccEEEccccEEEcccHHHHHHHHcccccccccccccccccHHHHHHcc
Coil and Loop (DISEMBL)
dydddwnnlddhvgkpsrrrslgvessvpklkiktetddkswedksllepeIKIKVeqgqattsdeteeddntrQTSFKTIISKYVgyniddlntIDKRAKRTaraassgsdtpkkrrgrsrskgrdapvsrkrnrraktpsqeeTDAKILQQQKNLEKKIKKMAKEERRRkidldkkpsdmdNVFASLdemsseeeeeedwdeihlgqfspyefkcrvcdwKLNSYDKLlrhmdwdevhlgqfspyefkcrvcdwKLNSYDKLLRHIksdhggyetsslcyhcgyysknrstlknhVRVEHGENQAKRKEKKICDICSAEVVHLAIHKkhshsgqyhvcphcgkkftRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMrvhtnekpykckdcgaafnhnvslknhknsscpklySYETYLKHLKtnhhgyevsnlCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYhinghikdkhsgfflqcphcpktfprktelsnhikgihmkHELRQTFVCEYCNKEFTFLQYLKRHMrthtnekpykcvcglgfnfnvsLKNHKQKCSVFLLTEsmnsvsgaqgahALQQQ
Flexible Loop (DISEMBL)
dydddwnnlddhvgkpsrrrslgvessvpklkiktetddkswedksllepeikikveqgqattsdeteeddntrqtSFKTIISkyvgyniddlntiDKRAKrtaraassgsdtpkkrrgrsrskgrdapvsrkrnrraktpsqeetdakilqQQKNLEKKIKKMAKeerrrkidldkkpsdmdnVFASLDEMSSEEEEEEDWdeihlgqfspyefKCRVCDWKLNSYDKLLRHMDWDEvhlgqfspyefkCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEhgenqakrkekkiCDICSAEVVHLAIHKKhshsgqyhVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNvslknhknsscPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCGLGFNFNVSLKNHKQKCSVFLLTESMNSVSGAQGAHALQQQ
Low Complexity Region (SEG)
dydddwnnlddHVGKPSRRRSLGVESSVPKLKIKTETDDKSWEDKSLLEPEIKIKVEQGQAttsdeteeddNTRQTSFKTIISKYVGYNIDDLNTIDkrakrtaraaSSGSDTPkkrrgrsrskgrDAPVSRKRNRRAKTPSQEETDAKILQQQKNLEKKIKKMAKEERRRKIDLDKKPSDMDNVFAsldemsseeeeeedwdeIHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCGLGFNFNVSLKNHKQKCSVFLLTESMNSVSGAQGAHALQQQ
Disordered region (IsUnstruct)
*****************************************************************************FKTIISKYVGYNIDDLNTI************************************************************************************************************IHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHV*************KKICDICSAEVVHLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCGLGFNFNVSLKNHKQKCSVFLLT******************
Disordered Region (DISOPRED)
****DWNNLDDHVGKPSRRRSLGVESSVPKLKIKTET************************T********************SKYVGYNIDDLN*******************PKKRRGRSRSKGRDAPVSRKRNRRAKTPSQEETDAKILQQQKNLEKKIKKMAKEERRRKIDLDKKPSDMDNVFASLDEMSSEEEEEEDWDEIHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCGLGFNFNVSLKNHKQKCSVFLLTESMNSVS***********
Disordered Region (DISEMBL)
DYDDDWNNLDDHVGKP**********SVPKLKIKT********DKSLLEPEIKIKVE*****************QTSFKTIISKYVGYNIDDLNTIDKR***********************************************DAKILQQQKNLEKKIKKMAKEERRRKIDLDKKPSDMDNVFASL**************EIHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVE***********KICDICSAEVVHLAIHK********HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCGLGFNFNVSLKNHKQKCSVFLLTESMNS*************
Disordered Region (DISPRO)
DYDDDWNNLDDHVGKPSRRRSLGVESSVPKLKIKTETDDKSWEDKSLLEPEIKIKVEQGQATTSDETEEDDNTRQTSFKTIISKYVGYNIDDLNTIDKRAKRTARAASSGSDTPKKRRGRSRSKGRDAPVSRKRNRRAKTPSQEETDAKILQQQKNLEKKIKKMAKEERRRKIDLDKKPSDMDNVFASLDEMSSEEEEEEDWDEIHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCGLGFNFNVSLKNHKQKCSVFLLTESMNSVSGAQGAH*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
DYDDDWNNLDDHVGKPSRRRSLGVESSVPKLKIKTETDDKSWEDKSLLEPEIKIKVEQGQATTSDETEEDDNTRQTSFKTIISKYVGYNIDDLNTIDKRAKRTARAASSGSDTPKKRRGRSRSKGRDAPVSRKRNRRAKTPSQEETDAKxxxxxxxxxxxxxxxxxxxxxxKIDLDKKPSDMDNVFASLDEMSSEEEEEEDWDEIHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCGLGFNFNVSLKNHKQKCSVFLLTESMNSVSGAQGAHALQQQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	606	2.2.26 [Sep-21-2011]
P10076	861	Zinc finger protein 26 OS	no	N/A	0.582	0.409	0.316	5e-32
Q6ZNG1	722	Zinc finger protein 600 O	yes	N/A	0.584	0.490	0.309	6e-31
A2T812	754	Zinc finger protein 287 O	N/A	N/A	0.564	0.453	0.286	1e-30
Q9HBT7	754	Zinc finger protein 287 O	no	N/A	0.564	0.453	0.286	1e-30
Q9UJU3	913	Zinc finger protein 112 O	no	N/A	0.587	0.389	0.313	4e-30
Q0VAW7	879	Zinc finger protein 112 O	no	N/A	0.475	0.327	0.311	1e-29
A6NN14	1173	Zinc finger protein 729 O	no	N/A	0.516	0.266	0.335	1e-29
Q99676	751	Zinc finger protein 184 O	no	N/A	0.556	0.448	0.290	4e-29
Q9HCG1	818	Zinc finger protein 160 O	no	N/A	0.572	0.424	0.339	5e-29
A6QLU5	752	Zinc finger protein 184 O	no	N/A	0.556	0.448	0.290	1e-28

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  139 bits (351), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 177/389 (45%), Gaps = 36/389 (9%)

Query: 205 IHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKL 264
           IH G   PY  KC  C     +   L +H+    +H G+  PYE  C+ C    ++   L
Sbjct: 463 IHTG-IKPY--KCNYCGKAFTARSGLTKHVL---IHNGE-KPYE--CKECGKAFSTSSGL 513

Query: 265 LRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVH 324
           + HI+   G  E    CY CG    + S+L  H+R   GE   K  E   CD       +
Sbjct: 514 VEHIRIHTG--EKPFECYQCGKALAHSSSLVGHLRTHTGE---KPFECNQCDKTFTRSSY 568

Query: 325 LAIHKKHSHSGQ-YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYN 383
           L IH + +H+G+  + C  CGK F  ++ L  HI+     H  E+ Y C+ C K F  + 
Sbjct: 569 LRIHMR-THTGEKPYECKECGKTFPERSCLTKHIR----THTGERPYECKECGKGFISFA 623

Query: 384 YLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNH----------KNSSCPKLYSYETYLKH 433
            L  H++ H++E+P++CK C  +F ++ SL+ H          K S C K ++  + L  
Sbjct: 624 QLTVHIKTHSSERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTI 683

Query: 434 LKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIK 493
              NH G E S  C  CG   +  S L  HI+ H   +  +   C    A   ++N H+K
Sbjct: 684 HLRNHTG-EKSYACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLK 742

Query: 494 DKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMR 553
                   QC  C KTF   + L  H++     H   + F C  C K F +  YL+ HMR
Sbjct: 743 IHTGEKPFQCTVCGKTFTCSSYLPVHMR----THTGEKPFQCIICGKSFLWSSYLRVHMR 798

Query: 554 THTNEKPYKC-VCGLGFNFNVSLKNHKQK 581
            HT EKPY C  CG  F  +  L  H +K
Sbjct: 799 IHTGEKPYVCQYCGKAFTEHSGLNKHLRK 827

May be involved in transcriptional regulation.
Mus musculus (taxid: 10090)

>sp|Q6ZNG1|ZN600_HUMAN Zinc finger protein 600 OS=Homo sapiens GN=ZNF600 PE=1 SV=2

 Score =  136 bits (342), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 182/410 (44%), Gaps = 56/410 (13%)

Query: 205 IHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKL 264
           IH G+  PY  KC  CD   +    L  H     +H G+  PY  KC+VCD       +L
Sbjct: 295 IHTGE-KPY--KCEECDKVFSRKSTLESH---KRIHTGE-KPY--KCKVCDTAFTWNSQL 345

Query: 265 LRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVH 324
            RH K  H G E +  C  CG    ++S+L  H R+  GE   K    K+CD   A   H
Sbjct: 346 ARH-KRIHTG-EKTYKCNECGKTFSHKSSLVCHHRLHGGEKSYK---CKVCDKAFAWNSH 400

Query: 325 LAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIH----------------------- 361
           L  H +    G+ + C  CGK F + ++L +H K IH                       
Sbjct: 401 LVRHTRIHSGGKPYKCNECGKTFGQNSDLLIH-KSIHTGEQPYKYEECEKVFSCGSTLET 459

Query: 362 --LKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNH--- 416
             + H  EK Y C+ C K F  ++YL +H R+H+ EKPYKC +C   F     L +H   
Sbjct: 460 HKIIHTGEKPYKCKVCDKAFACHSYLAKHTRIHSGEKPYKCNECSKTFRLRSYLASHRRV 519

Query: 417 -------KNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQ 469
                  K + C K +S  +YL H     H  E    C  CG   + + +L HH + H  
Sbjct: 520 HSGEKPYKCNECSKTFSQRSYL-HCHRRLHSGEKPYKCNECGKTFSHKPSLVHHRRLHTG 578

Query: 470 PRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHEL 529
            +  +  +C+       ++  H +   +    +C  C K F ++++LS H    H  H  
Sbjct: 579 EKSYKCTVCDKAFVRNSYLARHTRIHTAEKPYKCNECGKAFNQQSQLSLH----HRIHAG 634

Query: 530 RQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNH 578
            + + CE C+K F+   +LKRH R H  +KPYKC VC   F  +  LK H
Sbjct: 635 EKLYKCETCDKVFSRKSHLKRHRRIHPGKKPYKCKVCDKTFGSDSHLKQH 684

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A2T812|ZN287_PONPY Zinc finger protein 287 OS=Pongo pygmaeus GN=ZNF287 PE=3 SV=1

 Score =  134 bits (338), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 172/381 (45%), Gaps = 39/381 (10%)

Query: 215 FKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGG 274
           +KC VC  K   Y  LL+H      H  + S   ++C  C  +      L+ H +   G 
Sbjct: 361 YKCNVCGKKFRKYPSLLKHQS---THAKEKS---YECEECGKEFRHISSLIAHQRMHTG- 413

Query: 275 YETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICS---AEVVHLAIHKKH 331
            E    C+ CG     R+ L  H R+  GE   K      CD C    ++  HL IH++ 
Sbjct: 414 -EKPYECHQCGKAFSQRAHLTIHQRIHTGEKPYK------CDDCGKDFSQRAHLTIHQR- 465

Query: 332 SHSGQ-YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMR 390
           +H+G+  + C  CGK F+  + L  H +     H  EK YIC  C K F+   +L +H +
Sbjct: 466 THTGEKPYKCLECGKTFSHSSSLINHQR----VHTGEKPYICNECGKTFSQSTHLLQHQK 521

Query: 391 VHTNEKPYKCKDCGAAFNHNVSLKNH----------KNSSCPKLYSYETYLKHLKTNHHG 440
           +HT +KPYKC +C   F+ +  L  H          K + C K +++ + L   +T H G
Sbjct: 522 IHTGKKPYKCNECWKVFSQSTYLIRHQRIHSGEKCYKCNECGKAFAHSSTLIQHQTTHTG 581

Query: 441 YEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFF 500
            E S +C ICG   ++ + L  H + H   +  +  +C    ++  H+  H +  +    
Sbjct: 582 -EKSYICNICGKAFSQSANLTQHHRTHTGEKPYKCSVCGKAFSQSVHLTQHQRIHNGEKP 640

Query: 501 LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
            +C  C K + +   L+ H +     H   + + C  C K F +   L +H RTHT E+P
Sbjct: 641 FKCNICGKAYRQGANLTQHQR----IHTGEKPYKCNECGKAFIYSSSLNQHQRTHTGERP 696

Query: 561 YKC-VCGLGFNFNVSLKNHKQ 580
           YKC  C   F+    L  H++
Sbjct: 697 YKCNECDKDFSQRTCLIQHQR 717

May be involved in transcriptional regulation.

Pongo pygmaeus (taxid: 9600)

>sp|Q9HBT7|ZN287_HUMAN Zinc finger protein 287 OS=Homo sapiens GN=ZNF287 PE=2 SV=1

 Score =  134 bits (338), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 172/381 (45%), Gaps = 39/381 (10%)

Query: 215 FKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGG 274
           +KC VC  K   Y  LL+H      H  + S   ++C  C  +      L+ H +   G 
Sbjct: 361 YKCNVCGKKFRKYPSLLKHQS---THAKEKS---YECEECGKEFRHISSLIAHQRMHTG- 413

Query: 275 YETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICS---AEVVHLAIHKKH 331
            E    C+ CG     R+ L  H R+  GE   K      CD C    ++  HL IH++ 
Sbjct: 414 -EKPYECHQCGKAFSQRAHLTIHQRIHTGEKPYK------CDDCGKDFSQRAHLTIHQR- 465

Query: 332 SHSGQ-YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMR 390
           +H+G+  + C  CGK F+  + L  H +     H  EK YIC  C K F+   +L +H +
Sbjct: 466 THTGEKPYKCLECGKTFSHSSSLINHQR----VHTGEKPYICNECGKTFSQSTHLLQHQK 521

Query: 391 VHTNEKPYKCKDCGAAFNHNVSLKNH----------KNSSCPKLYSYETYLKHLKTNHHG 440
           +HT +KPYKC +C   F+ +  L  H          K + C K +++ + L   +T H G
Sbjct: 522 IHTGKKPYKCNECWKVFSQSTYLIRHQRIHSGEKCYKCNECGKAFAHSSTLIQHQTTHTG 581

Query: 441 YEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFF 500
            E S +C ICG   ++ + L  H + H   +  +  +C    ++  H+  H +  +    
Sbjct: 582 -EKSYICNICGKAFSQSANLTQHHRTHTGEKPYKCSVCGKAFSQSVHLTQHQRIHNGEKP 640

Query: 501 LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
            +C  C K + +   L+ H +     H   + + C  C K F +   L +H RTHT E+P
Sbjct: 641 FKCNICGKAYRQGANLTQHQR----IHTGEKPYKCNECGKAFIYSSSLNQHQRTHTGERP 696

Query: 561 YKC-VCGLGFNFNVSLKNHKQ 580
           YKC  C   F+    L  H++
Sbjct: 697 YKCNECDKDFSQRTCLIQHQR 717

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9UJU3|ZN112_HUMAN Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=2 SV=2

 Score =  133 bits (335), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 173/392 (44%), Gaps = 36/392 (9%)

Query: 201 DWDEIHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNS 260
           D   +H GQ  PY  KC +C    N    L  H     VH G+  PY  KC  CD   + 
Sbjct: 514 DHQRVHTGQ-KPY--KCNICGKGFNHRSVLNVH---QRVHTGE-KPY--KCEECDKGFSR 564

Query: 261 YDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSA 320
              L  H +   G  E    C  CG      S L+ H RV  GE   K +E   C    +
Sbjct: 565 SSYLQAHQRVHTG--EKPYKCEECGKGFSRNSYLQGHQRVHTGEKPYKCEE---CGKGFS 619

Query: 321 EVVHLAIHKKHSHSGQYHV-CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEF 379
              HL  H++  H+G+    C  CGK F+    LQ+H +     H  EK Y CE C K F
Sbjct: 620 RSSHLQGHQR-VHTGEKPFKCEECGKGFSWSFNLQIHQR----VHTGEKPYKCEECGKGF 674

Query: 380 TFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKN----------SSCPKLYSYET 429
           +  + L  H RVHT EKPY+C +CG +F+    L++H++            C K +S   
Sbjct: 675 SKASTLLAHQRVHTGEKPYQCDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRA 734

Query: 430 YLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHIN 489
           YL+  +  H   +    C +CG   ++ S L  H + H   +  + ++C    +E   + 
Sbjct: 735 YLQGHQRVHTRVKPYK-CEMCGKGFSQSSRLEAHRRVHTGGKPYKCEVCTKGFSESSRLQ 793

Query: 490 GHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLK 549
            H +    G   +C  C K F   + L  H    H  H   + + CE C K F+    L+
Sbjct: 794 AHQRVHVEGRPYKCEQCGKGFSGYSSLQAH----HRVHTGEKPYKCEVCGKGFSQRSNLQ 849

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNHKQ 580
            H R HT EKPYKC  CG GF ++  L  H++
Sbjct: 850 AHQRVHTGEKPYKCDACGKGFRWSSGLLIHQR 881

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q0VAW7|ZN112_MOUSE Zinc finger protein 112 OS=Mus musculus GN=Znf112 PE=2 SV=2

 Score =  132 bits (331), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 152/311 (48%), Gaps = 23/311 (7%)

Query: 281 CYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQYHVC 340
           C  CG    +RS L  H R+  GE   K +E   C    +   +L  H++     + + C
Sbjct: 525 CNACGKGFSHRSVLDIHHRIHTGEKPYKCEE---CGKGFSRSAYLQGHQRVHTGEKPYKC 581

Query: 341 PHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
             CGK F+R + LQ H +     H  EK Y CE C K F++   L+ H RVHT EKPYKC
Sbjct: 582 EECGKGFSRSSHLQGHQR----VHTGEKPYKCEECGKGFSWSFNLQIHQRVHTGEKPYKC 637

Query: 401 KDCGAAFNHNVSLKNHKNS----------SCPKLYSYETYLKHLKTNHHGYEVSNLCYIC 450
            +CG  F+   +L  H+             C K +S ++YL+  ++ H G E  ++C +C
Sbjct: 638 GECGKGFSKASTLLAHERVHTGEKPYQCHECGKNFSQKSYLQSHQSVHSG-ERPHICEVC 696

Query: 451 GFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTF 510
           G   ++R+ L  H++ H + +  + ++C    ++   +  H +        +C  C K F
Sbjct: 697 GKGFSQRAYLQGHLRVHTRVKPYKCEVCGKGFSQGSRLEAHQRVHTGRKPFKCETCTKGF 756

Query: 511 PRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGF 569
              + L  H +     HE  + + C+ C K F+    L+ H R HT EKPYKC VCG GF
Sbjct: 757 SESSRLQAHQR----IHEEGRPYKCDQCGKGFSGYSSLQAHHRVHTGEKPYKCEVCGKGF 812

Query: 570 NFNVSLKNHKQ 580
           +   +L+ H++
Sbjct: 813 SQRSNLQAHQR 823

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|A6NN14|ZN729_HUMAN Zinc finger protein 729 OS=Homo sapiens GN=ZNF729 PE=2 SV=3

 Score =  131 bits (330), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/346 (33%), Positives = 160/346 (46%), Gaps = 33/346 (9%)

Query: 249  FKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAK 308
            +KC  C    NS+  L++H K  H G E    C  CG   K  S L  H  +  GE   K
Sbjct: 768  YKCEECVKAFNSFSALMKH-KVIHTG-EKPYKCEECGKAFKWSSKLTVHKVIHTGEKPCK 825

Query: 309  RKEKKICDICSAEVVHLAIHKKHS--HSGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQ 365
                  C+ C     H +  +KH   H+G+  + C  CGK F + ++L  H K     H 
Sbjct: 826  ------CEECGKAFKHFSALRKHKIIHTGEKPYKCEECGKAFHQSSKLAKHKK----IHT 875

Query: 366  LEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKN------- 418
             EK Y CE C K F   ++L  H  +HT +KPYKC++CG AFN + +L  HK        
Sbjct: 876  GEKPYKCEECGKAFNRLSHLTTHKIIHTGKKPYKCEECGKAFNQSANLTTHKRIHTGEKP 935

Query: 419  ---SSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQK 475
                 C + +S  + L   K  H G E    C  CG   ++ STL  H   H   +  + 
Sbjct: 936  YKCEECGRAFSQSSTLTAHKIIHAG-EKPYKCEECGKAFSQSSTLTTHKIIHTGEKFYKC 994

Query: 476  QICEICCAEVYHINGHIKDKHSG-FFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFV 534
            + C    +++ H+  H K  HSG    +C  C K F + + L+ H K IH   +    + 
Sbjct: 995  EECGKAFSQLSHLTTH-KRIHSGEKPYKCEECGKAFKQSSTLTTH-KRIHAGEKF---YK 1049

Query: 535  CEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
            CE C+K F+   +L  H R HT EKPYKC  CG  FN +  L  HK
Sbjct: 1050 CEVCSKAFSRFSHLTTHKRIHTGEKPYKCEECGKAFNLSSQLTTHK 1095

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q99676|ZN184_HUMAN Zinc finger protein 184 OS=Homo sapiens GN=ZNF184 PE=1 SV=4

 Score =  130 bits (326), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 165/403 (40%), Gaps = 66/403 (16%)

Query: 205 IHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKL 264
           IH G+ +   +KC  C    N     +RH     +H G+  PYE  C  C    + +  L
Sbjct: 383 IHTGEKT---YKCNECGKAFNGPSTFIRH---HMIHTGE-KPYE--CNECGKAFSQHSNL 433

Query: 265 LRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKE-KKICDICSAEVV 323
            +H K+  G  E    C  CG      S+L  H+++  GE   K  E  K    CS+   
Sbjct: 434 TQHQKTHTG--EKPYDCAECGKSFSYWSSLAQHLKIHTGEKPYKCNECGKAFSYCSSLTQ 491

Query: 324 HLAIH-------------------------KKHSHSGQYHVCPHCGKKFTRKAELQLHIK 358
           H  IH                         K H+    Y  C  CGK F R + L  H +
Sbjct: 492 HRRIHTREKPFECSECGKAFSYLSNLNQHQKTHTQEKAYE-CKECGKAFIRSSSLAKHER 550

Query: 359 GIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKN 418
                H  EK Y C  C K F++ + L +H ++HT E+PYKC +CG AFN N+ L  HK 
Sbjct: 551 ----IHTGEKPYQCHECGKTFSYGSSLIQHRKIHTGERPYKCNECGRAFNQNIHLTQHKR 606

Query: 419 SSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQIC 478
                          + T    YE    C  CG      S+LA H + H + +  Q   C
Sbjct: 607 ---------------IHTGAKPYE----CAECGKAFRHCSSLAQHQKTHTEEKPYQCNKC 647

Query: 479 EICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYC 538
           E   ++  H+  H +        +C  C K F R T L+ H       H   + + C  C
Sbjct: 648 EKTFSQSSHLTQHQRIHTGEKPYKCNECDKAFSRSTHLTEH----QNTHTGEKPYNCNEC 703

Query: 539 NKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQ 580
            K F+   YL +H R H+ EKP+ C  CG  F +  +L  H++
Sbjct: 704 RKTFSQSTYLIQHQRIHSGEKPFGCNDCGKSFRYRSALNKHQR 746

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9HCG1|ZN160_HUMAN Zinc finger protein 160 OS=Homo sapiens GN=ZNF160 PE=2 SV=3

 Score =  129 bits (325), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 173/389 (44%), Gaps = 42/389 (10%)

Query: 205 IHLGQFSPYEFKCRVCD--WKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYD 262
           IH G+  PY  KC  C   ++ NSY  L RH     VH G+  PY  KC  C    + + 
Sbjct: 418 IHTGE-KPY--KCNECGKVFRYNSY--LGRHR---RVHTGE-KPY--KCNECGKAFSMHS 466

Query: 263 KLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKE-KKICDICSAE 321
            L  H +  H G +    C  C       S L NH R+  GE   K  E  K   + S+ 
Sbjct: 467 NLATH-QVIHTGTKPFK-CNECSKVFTQNSQLANHRRIHTGEKPYKCNECGKAFSVRSSL 524

Query: 322 VVHLAIHKKHSHSGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFT 380
             H AIH     SG+  + C  CGK FT+K+ L+ H +GIH     EK Y C  C K F 
Sbjct: 525 TTHQAIH-----SGEKPYKCIECGKSFTQKSHLRSH-RGIH---SGEKPYKCNECGKVFA 575

Query: 381 FYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSL----------KNHKNSSCPKLYSYETY 430
             + L RH RVHT EKPYKC DCG AF+   SL          K +K   C K++ + +Y
Sbjct: 576 QTSQLARHWRVHTGEKPYKCNDCGRAFSDRSSLTFHQAIHTGEKPYKCHECGKVFRHNSY 635

Query: 431 LKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHING 490
           L   +  H G E    C  CG   +  S L  H   H   +  +   C     +  H+  
Sbjct: 636 LATHRRIHTG-EKPYKCNECGKAFSMHSNLTTHKVIHTGEKPYKCNQCGKVFTQNSHLAN 694

Query: 491 HIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKR 550
           H +        +C  C K F  ++ L+ H + IH     ++ + C  C K FT   +L  
Sbjct: 695 HQRTHTGEKPYRCNECGKAFSVRSSLTTH-QAIHTG---KKPYKCNECGKVFTQNAHLAN 750

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
           H R HT EKPY+C  CG  F    SL  H
Sbjct: 751 HRRIHTGEKPYRCTECGKAFRVRSSLTTH 779

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A6QLU5|ZN184_BOVIN Zinc finger protein 184 OS=Bos taurus GN=ZNF184 PE=2 SV=1

 Score =  128 bits (322), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 165/403 (40%), Gaps = 66/403 (16%)

Query: 205 IHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKL 264
           IH G+ +   +KC  C    N     +RH     +H G+  PYE  C  C    + +  L
Sbjct: 384 IHTGEKT---YKCNECGKAFNGPSTFIRH---HMIHTGE-KPYE--CNECGKAFSQHSNL 434

Query: 265 LRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKE-KKICDICSAEVV 323
            +H K+  G  E    C  CG      S+L  H+++  GE   K  E  K    CS+   
Sbjct: 435 TQHQKTHTG--EKPYDCAECGKSFSYWSSLAQHLKIHTGEKPYKCNECGKAFSYCSSLTQ 492

Query: 324 HLAIH-------------------------KKHSHSGQYHVCPHCGKKFTRKAELQLHIK 358
           H  IH                         K H+    Y  C  CGK F R + L  H +
Sbjct: 493 HRRIHTREKPFECSECGKAFSYLSNLNQHQKTHTQEKAYE-CKECGKAFIRSSSLAKHER 551

Query: 359 GIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKN 418
                H  EK Y C  C K F++ + L +H ++HT E+PYKC +CG AFN N+ L  HK 
Sbjct: 552 ----IHTGEKPYQCHECGKTFSYGSSLIQHRKIHTGERPYKCNECGRAFNQNIHLTQHKR 607

Query: 419 SSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQIC 478
                          + T    YE    C  CG      S+LA H + H + +      C
Sbjct: 608 ---------------IHTGAKPYE----CAECGKAFRHCSSLAQHQKTHTEEKPYHCNKC 648

Query: 479 EICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYC 538
           E   ++  H+  H +        +C  C KTF R T L+ H       H   + + C  C
Sbjct: 649 EKAFSQSSHLAQHQRIHTGEKPYKCNECDKTFSRSTHLTEH----QNTHTGEKPYNCNEC 704

Query: 539 NKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQ 580
            K F+   YL +H R H+ EKP+ C  CG  F +  +L  H++
Sbjct: 705 RKTFSQSTYLIQHQRIHSAEKPFGCNDCGKAFRYRSALNKHQR 747

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	606
395751927	4142	PREDICTED: uncharacterized protein LOC10	0.559	0.081	0.300	1e-32
344299341	722	PREDICTED: zinc finger protein 709-like	0.541	0.454	0.309	1e-32
390345457	867	PREDICTED: zinc finger protein 84-like [	0.590	0.412	0.284	7e-32
432912003	572	PREDICTED: zinc finger protein 726-like	0.567	0.601	0.306	2e-31
260795613	583	hypothetical protein BRAFLDRAFT_65381 [B	0.679	0.706	0.279	2e-31
334329042	1158	PREDICTED: zinc finger protein 850-like	0.630	0.329	0.304	3e-31
326667006	1019	PREDICTED: zinc finger protein 271-like	0.544	0.323	0.298	3e-31
348550807	1242	PREDICTED: zinc finger protein 26-like [	0.589	0.287	0.314	6e-31
390345459	581	PREDICTED: zinc finger protein 84-like [	0.566	0.590	0.303	7e-31
440905011	790	Zinc finger protein 26, partial [Bos gru	0.564	0.432	0.317	1e-30

>gi|395751927|ref|XP_003779332.1| PREDICTED: uncharacterized protein LOC100433993 [Pongo abelii]

 Score =  147 bits (372), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 112/373 (30%), Positives = 168/373 (45%), Gaps = 34/373 (9%)

Query: 222  WKLNSYDKLLRHMDWDEVHLGQFS---PYEFKCRVCDWKLNSYDKLLRHIKSDHGGYETS 278
            +K N ++K+  +  +   H   ++   PY++      +  +SY  L++H K+  G  E  
Sbjct: 3113 YKYNEWEKVFGYDSFLTQHTSTYTAEKPYDYNECGTSFIWSSY--LIQHKKTHTG--EKP 3168

Query: 279  SLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQYH 338
              C  CG   +NRS L  H R   G    K  E   C    +   HL +HK+     + +
Sbjct: 3169 YECDKCGKVFRNRSALTKHERTHTG---IKPYECNKCGKAFSWNSHLIVHKRIHTGEKPY 3225

Query: 339  VCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPY 398
            VC  CGK F   +    H+ G    H  EK + C  C K F++ ++L  HMR+HT EKP+
Sbjct: 3226 VCNECGKSFNWNS----HLIGHQRTHTGEKPFECTECGKSFSWSSHLIAHMRMHTGEKPF 3281

Query: 399  KCKDCGAAFNHNVSLKNH----------KNSSCPKLYSYETYLKHLKTNHHGYEVSNLCY 448
            KC +C  AF    +L  H          K + C K +S+ ++L   +  H G +  N C 
Sbjct: 3282 KCDECEKAFRDYSALSKHERTHSGAKPYKCTECGKSFSWSSHLIAHQRTHTGEKPYN-CQ 3340

Query: 449  ICGFFSAKRSTLAHH--IQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHC 506
             CG    +RS L  H  I   I+P    K  C   C+++ H+  H +        +C  C
Sbjct: 3341 ECGKAFRERSALTKHEIIHSGIKPYECNK--CGKSCSQMAHLVRHQRTHTGEKPYECNKC 3398

Query: 507  PKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VC 565
             K+F +   L  H +     H   + + C  C + F    +L  H RTHT EKPY+C  C
Sbjct: 3399 GKSFSQSCHLVAHRR----IHTGEKPYKCNQCERSFNCSSHLIAHRRTHTGEKPYRCNEC 3454

Query: 566  GLGFNFNVSLKNH 578
            G  FN + SL  H
Sbjct: 3455 GKAFNESSSLIVH 3467

Source: Pongo abelii

Species: Pongo abelii

Genus: Pongo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|344299341|ref|XP_003421344.1| PREDICTED: zinc finger protein 709-like [Loxodonta africana]

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 171/371 (46%), Gaps = 43/371 (11%)

Query: 212 PYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSD 271
           PYE  C+ C    +    L RH+    VH G+  PYE  C+ C    +    L RHI++ 
Sbjct: 363 PYE--CKECGKAFSQVSDLTRHI---RVHSGE-KPYE--CKDCRKAFSYLSNLTRHIRTH 414

Query: 272 HGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKH 331
            G  E    C  CG      S L  H+R   GE   + KE   C         LA H + 
Sbjct: 415 SG--ERPYECKECGKAFSRSSFLATHIRTHSGERPYECKE---CGKAFTRSSFLATHIR- 468

Query: 332 SHSGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMR 390
           +HSG+  + C  CGK F+  +  + HI+     H  E+ Y C+ C K F+  +YL RH+ 
Sbjct: 469 THSGERPYECKECGKAFSSSSSFRKHIR----THSGERPYECKECGKTFSQVSYLSRHIS 524

Query: 391 VHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYIC 450
            H+ EKPY+CK+CG AF+    L  H+ +                   H  +    C IC
Sbjct: 525 SHSGEKPYECKECGKAFSQCSQLTRHQRA-------------------HSGDRPYECKIC 565

Query: 451 GFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTF 510
           G   ++ S L  HI+ H   R  + + C    ++  H+  HI+  +     +C  C KTF
Sbjct: 566 GKAFSQSSHLISHIRTHSGDRPYECKECGKTFSQSSHLTSHIRTHNGDRPYKCKECGKTF 625

Query: 511 PRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGF 569
            + + L++HI+     H   + + C+ C K F+    L RH RTH+ E+PY+C  CG  F
Sbjct: 626 SQSSHLTSHIR----THSGDRPYACKECGKSFSDYSSLTRHRRTHSGERPYECQACGKAF 681

Query: 570 NFNVSLKNHKQ 580
           + + SL  H +
Sbjct: 682 SSSSSLHKHAR 692

Source: Loxodonta africana

Species: Loxodonta africana

Genus: Loxodonta

Family: Elephantidae

Order: Proboscidea

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|390345457|ref|XP_003726338.1| PREDICTED: zinc finger protein 84-like [Strongylocentrotus purpuratus]

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 187/429 (43%), Gaps = 71/429 (16%)

Query: 216 KCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGY 275
           +C  C+ + +  D L  H+     H G+  P++FKC  C  + +  + L  H+++  G  
Sbjct: 399 QCPYCEKEFSKKDVLTIHL---RTHTGE-KPFKFKCSQCHKEFSQKNNLTSHLRTHTG-- 452

Query: 276 ETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKH---- 331
           E    C HC      RSTL  H+R   GE   +      C  C  E  H  +   H    
Sbjct: 453 EKPFKCSHCDKGFARRSTLIIHLRTHSGEKPHQ------CPYCDKEFSHKHVLTSHLRTH 506

Query: 332 --------------------------SHSGQ-YHVCPHCGKKFTRKAELQLHIKGIHLKH 364
                                     +HSG+  H CP+C KKF+RK  L  H++     H
Sbjct: 507 TGEKPFKCSQFHEGFAQRSTLINHFRTHSGEKPHQCPYCDKKFSRKHVLTSHLR----TH 562

Query: 365 QLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKN--------- 415
             EK + C +C K+FT  N+L  H+R HT EKP+KC  C   F+   +L N         
Sbjct: 563 TGEKPFKCSHCDKDFTQQNHLTSHLRTHTGEKPFKCSHCDTGFSQKTTLINHLRTHSGEK 622

Query: 416 -HKNSSCPKLYSYETYLK-HLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMK 473
            H+ + C K +S +  L  HL+T+         C  C    ++RSTL  H++ H   +  
Sbjct: 623 PHQCTYCEKEFSKKDVLTIHLRTHTGEKPFKFKCSQCHKGFSQRSTLIIHLRTHSGEKPH 682

Query: 474 QKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTF 533
           Q   C+   ++  ++  H++        +C HC K F R++ L  H++     H   +  
Sbjct: 683 QCPCCDKEFSQKNNLTSHLRTHTGEKPFKCSHCDKGFARRSTLIIHLR----THSGEKPH 738

Query: 534 VCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNH--------KQKCSV 584
            C YC+KEF+    L  H+RTHT EKP+KC     GF    +L NH          +C  
Sbjct: 739 QCPYCDKEFSHKHVLTSHLRTHTGEKPFKCSQFHKGFAQRSTLINHFRTHSGEKPHQCPY 798

Query: 585 FLLTESMNS 593
           + +T +M +
Sbjct: 799 YFMTMTMTT 807

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|432912003|ref|XP_004078819.1| PREDICTED: zinc finger protein 726-like [Oryzias latipes]

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 171/379 (45%), Gaps = 35/379 (9%)

Query: 215 FKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGG 274
           + C +C        +L  HM     H G+     F C++C         L  H ++  G 
Sbjct: 179 YSCEICGKDFTVSSRLTVHM---RTHTGE---RPFLCKLCGKTFKHSGSLKAHTRTHTG- 231

Query: 275 YETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHS-- 332
            E    C  CG      S+LK+H+R   GE          C+IC+   V  +  + H   
Sbjct: 232 -EKPFSCEICGKSLMKNSSLKDHMRTHTGERPFS------CEICAKGFVKNSSLRDHMRI 284

Query: 333 HSGQYHV-CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRV 391
           H+G+    C  CGK FT+ + LQ H++     H  EK + C+ C K F     L  HMR 
Sbjct: 285 HTGEKPFSCKTCGKAFTQNSTLQHHMR----THTGEKPFSCKICGKAFFQPYILTNHMRK 340

Query: 392 HTNEKPYKCKDCGAAFNHNVSLKNH-KNSSCPKLYSYET-----YLKHLKTNH---HGYE 442
           HT E+P+ C+ CG +F  N SLK+H K+ +  + +S ET     +  +  TNH   H  E
Sbjct: 341 HTGERPFSCEICGKSFIRNSSLKDHMKSHTGERPFSCETCGKCFFQPYSLTNHMRIHTGE 400

Query: 443 VSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQ 502
               C ICG    +  +L HH++ H   R      C     +   +  H++         
Sbjct: 401 RPFSCDICGKAFTQSGSLQHHVKIHTAQRPFTCDTCGKAFTQNSTLQHHMRTHTGERPYS 460

Query: 503 CPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYK 562
           C  C K+F R   L++H+K     H   + F CE C K F     LK HM++HT+E+P+ 
Sbjct: 461 CTLCGKSFSRNDSLTSHVK----THTSERPFSCEQCGKRFIKSGSLKVHMKSHTDERPFF 516

Query: 563 C-VCGLGFNFNVSLKNHKQ 580
           C +CG  FN N SL  H++
Sbjct: 517 CEICGKSFNRNASLNIHRK 535

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260795613|ref|XP_002592799.1| hypothetical protein BRAFLDRAFT_65381 [Branchiostoma floridae] gi|229278023|gb|EEN48810.1| hypothetical protein BRAFLDRAFT_65381 [Branchiostoma floridae]

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 217/469 (46%), Gaps = 57/469 (12%)

Query: 125 GRDAPVSRKRNRRAKTPSQEETDAKILQQQKNLEKKIKKMAKEERRRKIDLDKKPSDMDN 184
           G    V   R+RR  T S  ++   + ++ K  +  ++ + +E+R +  + +K+ S +  
Sbjct: 124 GETLQVKCNRSRRMSTTSSAKSLGDVERKAKR-DSSVRSVREEKRYKCEECNKQFSQLGG 182

Query: 185 VFASLDEMSSEEEEEEDWDEIHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQF 244
           + A +                H G+  PY  +C  C  + +    L  HM   + H G+ 
Sbjct: 183 LKAHV--------------RTHTGE-KPY--RCEECSRQFSQVGHLKSHM---QTHTGE- 221

Query: 245 SPYEFKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGE 304
            PY  +C  C  + +    L  H++S  G  E    C  C        TLK H+R   GE
Sbjct: 222 KPY--RCEKCSKQFSQLGHLNIHMRSHTG--EKPFRCEECSKQFSRMDTLKTHMRTHTGE 277

Query: 305 NQAKRKEKKICDICSAEVVHLAIHKKH--SHSGQY-HVCPHCGKKFTRKAELQLHIKGIH 361
              +      C+ CS +  HL   KKH  +H+G+  + C  C K+F++ + L+ H++   
Sbjct: 278 RPYR------CEECSRQFSHLGTLKKHMRTHTGEKPYRCEECSKQFSQLSNLKKHVR--- 328

Query: 362 LKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNS-- 419
             H  EK Y CE C K+F+  + L++H+R HT EKPY+C++C   F+    LK H  +  
Sbjct: 329 -THTGEKPYRCEECSKQFSQLSNLKKHVRTHTGEKPYRCEECSKQFSRLGHLKGHMRTHT 387

Query: 420 --------SCPKLYSYETYLK-HLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQP 470
                    C + +S   +LK H++T  H  E    C  C    ++ S L  H++ H   
Sbjct: 388 GEKPYRCEECRRQFSLFHHLKNHMRT--HTGEKPYRCEECSRQFSQLSDLKRHVRTHTGE 445

Query: 471 RMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELR 530
           +    + C    +++ H+  H++        +C  C + F     L +H++     H   
Sbjct: 446 KPYTCEECSSQFSQLDHLKKHMRTHTGEKPYRCEECSRQFSVLCNLHSHMR----THTGD 501

Query: 531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNH 578
           + F CE CN++F+ L+ LKRHMRTHT EKPY+C  C   F+   +LK H
Sbjct: 502 KLFKCEECNRQFSLLENLKRHMRTHTGEKPYRCEECSRQFSELGTLKTH 550

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334329042|ref|XP_003341172.1| PREDICTED: zinc finger protein 850-like [Monodelphis domestica]

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 132/433 (30%), Positives = 189/433 (43%), Gaps = 51/433 (11%)

Query: 164  MAKEERRRKIDLDKKPSDMDNVFASLDEMSSEEEEEEDWDEIHLGQFSPYEFKCRVCDWK 223
            +AK +R   I   +KP +      +  E +S    +     IH G+  PYE  C  C   
Sbjct: 747  LAKHQR---IHSGEKPYECTQCGKAFTESNSLARHQR----IHTGE-KPYE--CTQCGKI 796

Query: 224  LNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYH 283
                  L+RH     +H G+     ++C  C         L +H +   G  E    C  
Sbjct: 797  FTQRGDLVRH---QRIHTGE---KLYECTQCGKAFTQRGNLAKHQRIHSG--EKPYECMQ 848

Query: 284  CGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQY-HVCPH 342
            CG     R  L  H R+  GE   K  E   C     + V+LA H++  HSG+  + C  
Sbjct: 849  CGKAFTQRGNLAKHQRIHSGE---KPYECSQCGKAFTQRVNLAAHQR-IHSGEKPYECTQ 904

Query: 343  CGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKD 402
            CGK FTR+ +L  H +     H  EK Y C  C K FT  + L RH R+HT +KPY+C  
Sbjct: 905  CGKPFTRRGKLAAHQR----IHTGEKPYECTQCRKAFTESSSLARHQRIHTGKKPYECTQ 960

Query: 403  CGAAFNHNVSLKNHKN----------SSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGF 452
            CG AF H VSL  H++          + C K + +   L   +  H G E    C  CG 
Sbjct: 961  CGKAFIHRVSLAAHQSIHTGEKPYECTQCGKAFIHRVSLAEHQRIHTG-EKPYGCTQCGR 1019

Query: 453  FSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHI---KDKHSGF-FLQCPHCPK 508
              ++R  LA H + H      +K      C +++ + GH+   +  H+G    +C  C K
Sbjct: 1020 AFSRRGDLAKHQRIH----SGEKPYECTQCGKIFTVRGHLVRHQRIHTGEKPYKCTQCGK 1075

Query: 509  TFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGL 567
             F ++  L+ H    H  H   + + C  C K FT    L  H R H+ EKPY+C  CG 
Sbjct: 1076 AFTQRQYLAVH----HRIHSGEKPYECTQCGKAFTRRDNLAAHQRIHSGEKPYECTQCGK 1131

Query: 568  GFNFNVSLKNHKQ 580
             F  +VSL  H++
Sbjct: 1132 AFTHSVSLAKHQR 1144

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667006|ref|XP_003198449.1| PREDICTED: zinc finger protein 271-like [Danio rerio]

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 160/382 (41%), Gaps = 52/382 (13%)

Query: 205 IHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKL 264
           IH G+     F C  C    N    L++HM    +H G+  PY   C  C    +    L
Sbjct: 53  IHTGE---KPFTCTQCGKSFNCSSSLIQHM---RIHTGE-KPY--TCTQCGKSFSQSSSL 103

Query: 265 LRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVH 324
            +H++   G  E    C  CG    ++S LK H+ +  GE      +   C  C   V  
Sbjct: 104 NQHMRIHTG--EKPFTCTQCGKSLVSKSKLKIHMMIHTGE------KPFTCTQCGKSVNC 155

Query: 325 LAIHKKHS--HSGQ-YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTF 381
           L+   +H   H+G+    C  CGK F++ + L LH+    + H  EK + C +C   F+ 
Sbjct: 156 LSHLNQHMRIHTGEKPFTCTQCGKSFSQSSNLNLHL----MIHSGEKPFTCTWCGMSFSL 211

Query: 382 YNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGY 441
            + L  HMR+HT EKP+ C  CG +F  + SL  H  S                   H  
Sbjct: 212 SSNLNLHMRIHTGEKPFTCTQCGKSFIRSSSLNLHIMS-------------------HTG 252

Query: 442 EVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFL 501
           E    C  CG    + S+L  HI  H   +      C        H+N H+++       
Sbjct: 253 EKPFTCTQCGKSFIRSSSLNLHIMSHTGEKPFTCTQCGNSFTRSSHLNRHMRNHTGEKPF 312

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPY 561
            C  C K+F R + L+ HI    M H   + F C  C   FT   +L RHMR HT EKP+
Sbjct: 313 TCTQCGKSFIRSSSLNLHI----MSHTGEKPFTCTQCGNSFTRSSHLNRHMRNHTGEKPF 368

Query: 562 KCV-CGLGF----NFNVSLKNH 578
            C  CG  F    N N+ +K H
Sbjct: 369 TCTQCGKSFSQSSNLNLHMKIH 390

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348550807|ref|XP_003461222.1| PREDICTED: zinc finger protein 26-like [Cavia porcellus]

 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 170/397 (42%), Gaps = 40/397 (10%)

Query: 201  DWDEIHLGQFS---PYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWK 257
             W  IHL + +   PY   C +C+    S+ +L  H    + H G+     F+C+VC   
Sbjct: 786  SWLTIHLRKHTGEKPY--ACTLCEKAFTSFAQLTEHT---KTHTGE---KPFQCKVCART 837

Query: 258  LNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKE-KKICD 316
              +   L  H +  H G +    C  CG     RS L  HV + +GE     KE  K   
Sbjct: 838  FRNSSCLKTHFR-IHTGIKPYK-CNFCGKDFTARSGLTKHVLIHNGEKPYDCKECGKAFS 895

Query: 317  ICSAEVVHLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCH 376
              SA V H+ IH       +   C  CGK     + L  H++     H  EK + C  C 
Sbjct: 896  TSSALVEHIRIHTGE----KPFECYKCGKALAYSSSLVAHLR----SHTGEKPFQCNLCE 947

Query: 377  KEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNS----------SCPKLYS 426
            K F+  +YLR HMR HT EKPY+C +CG  F     L  H  +           C K ++
Sbjct: 948  KAFSRSSYLRIHMRTHTGEKPYECTECGKTFPERSCLTKHVRTHTGERPYECKECGKDFT 1007

Query: 427  YETYLK-HLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEV 485
              + L  HL+ NH G E S  C  CG      S L  H++ H   +  +   C    A  
Sbjct: 1008 ARSGLTIHLR-NHTG-EKSYACQECGKAFTTSSGLIAHVRSHKGEKPFECDHCGKAFASS 1065

Query: 486  YHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFL 545
             ++N H+K        QC  C KTF   + L  H++     H   + F C  C K F + 
Sbjct: 1066 SYLNVHLKIHTGEKPFQCTVCGKTFTCSSYLPVHMR----THTGEKPFQCMICGKSFLWS 1121

Query: 546  QYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHKQK 581
             YL+ HMR HT EKPY C  CG  F  +  L  H +K
Sbjct: 1122 SYLRVHMRIHTGEKPYVCKYCGKAFTEHSGLNKHLRK 1158

Source: Cavia porcellus

Species: Cavia porcellus

Genus: Cavia

Family: Caviidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|390345459|ref|XP_003726339.1| PREDICTED: zinc finger protein 84-like [Strongylocentrotus purpuratus]

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 181/402 (45%), Gaps = 59/402 (14%)

Query: 216 KCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGY 275
           +C  CD + +  +KL RH+     H G+     FKC +CD      + L  H+++  G  
Sbjct: 127 QCPYCDKEFSQNNKLTRHL---RTHTGE---KPFKCSLCDKDFTQQNHLTSHLRTHTG-- 178

Query: 276 ETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSG 335
           E    C HC      RS L  HVR   GE   K  E   CD   ++   L  H + +HSG
Sbjct: 179 EKPFKCSHCDKGFSCRSNLNCHVRTHTGE---KPFECSQCDKGFSQKTTLINHLR-THSG 234

Query: 336 Q-YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTN 394
           +  + CP+C K+F++K  L  H++     H  EK + C  CHKEF+    L RH+R HT 
Sbjct: 235 EKPYQCPYCEKEFSKKDVLTTHLR----THTGEKPFKCSQCHKEFSQKTKLTRHLRTHTG 290

Query: 395 EKPYKCKDCGAAFNHNVSL----------KNHKNSSCPKLYSYETYL-KHLKTNH----- 438
           EKP+KC  C   F++  +L          K H+   C K +S +  L +HL+T+      
Sbjct: 291 EKPFKCSQCDKDFSYRSTLFIHLRIHSGEKPHQCPYCDKEFSLKAKLTRHLRTHTGEKPF 350

Query: 439 ---------------------HGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQI 477
                                H  E  + C  C    +++S L  H++ H   +  +   
Sbjct: 351 KCSQCDKDFSHRSALFIHLRTHSGEKPHQCPYCDKGFSQKSQLTSHLRIHTGEKPFKCSQ 410

Query: 478 CEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEY 537
           C+    +  H+  H++        +C HC   F +KT L NH++     H   + + C Y
Sbjct: 411 CDKDFTQQNHLTSHLRTHTGEKPFKCSHCDTGFSQKTTLINHLR----THSGERPYQCPY 466

Query: 538 CNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
           C KEF+    L  H+RTHT EKP+KC  C  GF    +L NH
Sbjct: 467 CEKEFSKKDELTTHIRTHTGEKPFKCSQCHKGFARRSTLINH 508

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|440905011|gb|ELR55460.1| Zinc finger protein 26, partial [Bos grunniens mutus]

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 162/381 (42%), Gaps = 39/381 (10%)

Query: 215 FKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGG 274
           +KC+ C        +L+ HM+    H G+     FKC +C         L +H+K   G 
Sbjct: 373 YKCQECGKTFTGSSRLIEHMN---THTGE---KPFKCDMCGKTFTQSSCLTKHMKIHTG- 425

Query: 275 YETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKH--S 332
            E    C  CG      S L  H+R   GE   K      CD C       +    H  +
Sbjct: 426 -EKPLKCDICGTTFTQTSYLTQHMRTHTGEKPFK------CDKCGKAFAAYSYLSNHFRT 478

Query: 333 HSGQYHV-CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRV 391
           H+G+    C  CGK F + + L  H K     H  EK + C+ C K F+  +YL RHMR 
Sbjct: 479 HTGEKPFKCDTCGKTFVQSSGLSQHKK----THTGEKPFKCDTCGKTFSQSSYLSRHMRT 534

Query: 392 HTNEKPYKCKDCGAAFNHNVSLKNHKNS----------SCPKLYSYETYL-KHLKTNHHG 440
           HT EKPYKC  CG  F  +  L+ H  S           C K ++  + L +H+KT  H 
Sbjct: 535 HTGEKPYKCDTCGKGFGFSSILRRHLQSHTGEKTAKCEKCGKTFTRASGLTQHMKT--HT 592

Query: 441 YEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFF 500
            E    C  CG   A  S L  H + H   +  +   C    A    +  H+K       
Sbjct: 593 GEKPYKCDKCGKAFADSSCLTKHFRTHTGEKPFKCDKCGKSFAVSSRLIEHMKTHTGEKP 652

Query: 501 LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
            +C  C KTF R + L+ H+K     H   + F C+ C K FT    L RHM+ HT EKP
Sbjct: 653 FKCDTCGKTFTRSSGLTEHMK----THTGEKPFKCDTCGKTFTRSSGLTRHMKIHTGEKP 708

Query: 561 YKC-VCGLGFNFNVSLKNHKQ 580
           +KC  CG  F  +  L  H Q
Sbjct: 709 FKCDTCGKAFASSSHLIRHLQ 729

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	606
UNIPROTKB|Q5SXM1	525	ZNF678 "Zinc finger protein 67	0.557	0.643	0.344	4.7e-44
UNIPROTKB|P51522	516	ZNF83 "Zinc finger protein 83"	0.566	0.664	0.320	2.5e-42
UNIPROTKB|Q9HCG1	818	ZNF160 "Zinc finger protein 16	0.566	0.419	0.346	7.4e-42
UNIPROTKB|F5GXA7	580	ZNF678 "Zinc finger protein 67	0.557	0.582	0.344	1.1e-41
UNIPROTKB|Q03923	595	ZNF85 "Zinc finger protein 85"	0.566	0.576	0.322	1.1e-41
UNIPROTKB|Q49A12	536	ZNF85 "Zinc finger protein 85"	0.566	0.639	0.322	1.1e-41
UNIPROTKB|A6NN14	1173	ZNF729 "Zinc finger protein 72	0.561	0.289	0.324	1.6e-41
UNIPROTKB|F1LQ39	649	F1LQ39 "Uncharacterized protei	0.569	0.531	0.340	1.6e-41
UNIPROTKB|Q8NB50	900	ZFP62 "Zinc finger protein 62	0.569	0.383	0.331	1.7e-41
UNIPROTKB|Q6PDB4	577	ZNF880 "Zinc finger protein 88	0.557	0.585	0.330	1.7e-41

UNIPROTKB|Q5SXM1 ZNF678 "Zinc finger protein 678" [Homo sapiens (taxid:9606)]

 Score = 442 (160.7 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
 Identities = 131/380 (34%), Positives = 172/380 (45%)

Query:   205 IHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKL 264
             IH G+  PY  KC  C    N + +L  H    ++H G+  PY  KC  CD   N + +L
Sbjct:   146 IHTGE-KPY--KCDECGKVFNWWSQLTNHK---KIHTGE-KPY--KCDECDKVFNWWSQL 196

Query:   265 LRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSA--EV 322
               H K  H G E    C  CG      S L  H R+  GE   K KE   C  C A  + 
Sbjct:   197 TSH-KKIHSG-EKPYPCEECGKAFTQFSNLTQHKRIHTGEKPYKCKE---C--CKAFNKF 249

Query:   323 VHLAIHKKHSHSGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTF 381
              +L  HK+  H+G+  + C  CG  F   + L  H + IH     EK Y CE C K FT 
Sbjct:   250 SNLTQHKR-IHTGEKPYKCEECGNVFNECSHLTRH-RRIHTG---EKPYKCEECGKAFTQ 304

Query:   382 YNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKN----------SSCPKLYSYETYL 431
             +  L RH R+HT EKPY+C++CG  FN    L +HK             C + ++  + L
Sbjct:   305 FASLTRHKRIHTGEKPYQCEECGKTFNRCSHLSSHKRIHTGEKPYKCEECGRTFTQFSNL 364

Query:   432 KHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGH 491
                K  H G E    C  CG    K S+L  H + H   +  + + C     +  H+  H
Sbjct:   365 TQHKRIHTG-EKPYKCKECGKAFNKFSSLTQHRRIHTGVKPYKCEECGKVFKQCSHLTSH 423

Query:   492 IKDKHSGFF-LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKR 550
              K  H+G    +C  C K F + + LS H K IH + +    + CE C K F     L R
Sbjct:   424 -KRIHTGEKPYKCKECGKAFYQSSILSKH-KRIHTEEK---PYKCEECGKAFNQFSSLTR 478

Query:   551 HMRTHTNEKPYKCV-CGLGF 569
             H R HT EK YKC  CG GF
Sbjct:   479 HKRIHTGEKRYKCKECGKGF 498

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|P51522 ZNF83 "Zinc finger protein 83" [Homo sapiens (taxid:9606)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 121/378 (32%), Positives = 174/378 (46%)

Query:   214 EFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHG 273
             +FKC +C    N    L  H     +H G+  PY  KC  C    ++   L +H +  H 
Sbjct:   120 QFKCDICGKIFNKKSNLASHQ---RIHTGE-KPY--KCNECGKVFHNMSHLAQH-RRIHT 172

Query:   274 GYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSH 333
             G E    C  CG      S L  H R+  GE   K  E   C     ++ HLA H+   H
Sbjct:   173 G-EKPYKCNECGKVFNQISHLAQHQRIHTGEKPYKCNE---CGKVFHQISHLAQHRT-IH 227

Query:   334 SGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVH 392
             +G+  + C  CGK F+R + L  H+    + H  EK Y C  C K F   ++L +H R+H
Sbjct:   228 TGEKPYECNKCGKVFSRNSYLVQHL----IIHTGEKPYRCNVCGKVFHHISHLAQHQRIH 283

Query:   393 TNEKPYKCKDCGAAFNHNVSLKNH----------KNSSCPKLYSYETYLKHLKTNHHGYE 442
             T EKPYKC +CG  F+H  SL NH          K + C K++S+++ L +    H G E
Sbjct:   284 TGEKPYKCNECGKVFSHKSSLVNHWRIHTGEKPYKCNECGKVFSHKSSLVNHWRIHTG-E 342

Query:   443 VSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFF-L 501
                 C  CG   ++ S LA H+  H   +  +   C+   ++  H+  H +  H+G    
Sbjct:   343 KPYKCNECGKVFSRNSYLAQHLIIHAGEKPYKCDECDKAFSQNSHLVQHHRI-HTGEKPY 401

Query:   502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPY 561
             +C  C K F + + L+ H + IH   +    + C  C K F     L  H + HT EKP+
Sbjct:   402 KCDECGKVFSQNSYLAYHWR-IHTGEK---AYKCNECGKVFGLNSSLAHHRKIHTGEKPF 457

Query:   562 KC-VCGLGFNFNVSLKNH 578
             KC  CG  F+   SL NH
Sbjct:   458 KCNECGKAFSMRSSLTNH 475

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

GO:0005634 "nucleus" evidence=NAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

UNIPROTKB|Q9HCG1 ZNF160 "Zinc finger protein 160" [Homo sapiens (taxid:9606)]

 Score = 451 (163.8 bits), Expect = 7.4e-42, P = 7.4e-42
 Identities = 136/393 (34%), Positives = 179/393 (45%)

Query:   205 IHLGQFSPYEFKCRVCD--WKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYD 262
             IH G+  PY  KC  C   ++ NSY  L RH     VH G+  PY  KC  C    + + 
Sbjct:   418 IHTGE-KPY--KCNECGKVFRYNSY--LGRHR---RVHTGE-KPY--KCNECGKAFSMHS 466

Query:   263 KLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKE-KKICDICSAE 321
              L  H +  H G +    C  C       S L NH R+  GE   K  E  K   + S+ 
Sbjct:   467 NLATH-QVIHTGTKPFK-CNECSKVFTQNSQLANHRRIHTGEKPYKCNECGKAFSVRSSL 524

Query:   322 VVHLAIHKKHSHSGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFT 380
               H AIH     SG+  + C  CGK FT+K+ L+ H +GIH     EK Y C  C K F 
Sbjct:   525 TTHQAIH-----SGEKPYKCIECGKSFTQKSHLRSH-RGIHSG---EKPYKCNECGKVFA 575

Query:   381 FYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSL----------KNHKNSSCPKLYSYETY 430
               + L RH RVHT EKPYKC DCG AF+   SL          K +K   C K++ + +Y
Sbjct:   576 QTSQLARHWRVHTGEKPYKCNDCGRAFSDRSSLTFHQAIHTGEKPYKCHECGKVFRHNSY 635

Query:   431 LKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHING 490
             L   +  H G E    C  CG   +  S L  H   H   +  +   C  C  +V+  N 
Sbjct:   636 LATHRRIHTG-EKPYKCNECGKAFSMHSNLTTHKVIHTGEKPYK---CNQC-GKVFTQNS 690

Query:   491 HIKDK---HSGFF-LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQ 546
             H+ +    H+G    +C  C K F  ++ L+ H + IH     ++ + C  C K FT   
Sbjct:   691 HLANHQRTHTGEKPYRCNECGKAFSVRSSLTTH-QAIHTG---KKPYKCNECGKVFTQNA 746

Query:   547 YLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
             +L  H R HT EKPY+C  CG  F    SL  H
Sbjct:   747 HLANHRRIHTGEKPYRCTECGKAFRVRSSLTTH 779

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0030097 "hemopoiesis" evidence=NAS

GO:0005634 "nucleus" evidence=NAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

UNIPROTKB|F5GXA7 ZNF678 "Zinc finger protein 678" [Homo sapiens (taxid:9606)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 131/380 (34%), Positives = 172/380 (45%)

Query:   205 IHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKL 264
             IH G+  PY  KC  C    N + +L  H    ++H G+  PY  KC  CD   N + +L
Sbjct:   201 IHTGE-KPY--KCDECGKVFNWWSQLTNHK---KIHTGE-KPY--KCDECDKVFNWWSQL 251

Query:   265 LRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSA--EV 322
               H K  H G E    C  CG      S L  H R+  GE   K KE   C  C A  + 
Sbjct:   252 TSH-KKIHSG-EKPYPCEECGKAFTQFSNLTQHKRIHTGEKPYKCKE---C--CKAFNKF 304

Query:   323 VHLAIHKKHSHSGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTF 381
              +L  HK+  H+G+  + C  CG  F   + L  H + IH     EK Y CE C K FT 
Sbjct:   305 SNLTQHKR-IHTGEKPYKCEECGNVFNECSHLTRH-RRIHTG---EKPYKCEECGKAFTQ 359

Query:   382 YNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKN----------SSCPKLYSYETYL 431
             +  L RH R+HT EKPY+C++CG  FN    L +HK             C + ++  + L
Sbjct:   360 FASLTRHKRIHTGEKPYQCEECGKTFNRCSHLSSHKRIHTGEKPYKCEECGRTFTQFSNL 419

Query:   432 KHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGH 491
                K  H G E    C  CG    K S+L  H + H   +  + + C     +  H+  H
Sbjct:   420 TQHKRIHTG-EKPYKCKECGKAFNKFSSLTQHRRIHTGVKPYKCEECGKVFKQCSHLTSH 478

Query:   492 IKDKHSGFF-LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKR 550
              K  H+G    +C  C K F + + LS H K IH + +    + CE C K F     L R
Sbjct:   479 -KRIHTGEKPYKCKECGKAFYQSSILSKH-KRIHTEEK---PYKCEECGKAFNQFSSLTR 533

Query:   551 HMRTHTNEKPYKCV-CGLGF 569
             H R HT EK YKC  CG GF
Sbjct:   534 HKRIHTGEKRYKCKECGKGF 553

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q03923 ZNF85 "Zinc finger protein 85" [Homo sapiens (taxid:9606)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 122/378 (32%), Positives = 167/378 (44%)

Query:   215 FKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGG 274
             +KC  C    N    L++H    ++H G+  PY  KC  C    N +  L  H K  H G
Sbjct:   230 YKCEECGKAFNQSSNLIKHK---KIHTGE-KPY--KCEECGKTFNRFSTLTTH-KIIHTG 282

Query:   275 YETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHS 334
              E    C  CG      STL  H ++  GE   K +E   C     +  +L  HK   H+
Sbjct:   283 -EKPYKCKECGKAFNRSSTLTTHRKIHTGEKPYKCEE---CGKAFKQSSNLTTHKI-IHT 337

Query:   335 GQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHT 393
             G+  + C  CGK F + A L  H     + H  EK Y CE C K F  +++L  H  +HT
Sbjct:   338 GEKPYKCKKCGKAFNQSAHLTTH----EVIHTGEKPYKCEKCGKAFNHFSHLTTHKIIHT 393

Query:   394 NEKPYKCKDCGAAFNHNVSLKNHKN----------SSCPKLYSYETYLKHLKTNHHGYEV 443
              EKPYKCK+CG AF H+ +L  HK             C K ++  + L   K  H G E 
Sbjct:   394 GEKPYKCKECGKAFKHSSTLTKHKIIHTGEKPYKCKECEKAFNQSSKLTEHKKIHTG-EK 452

Query:   444 SNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFF-LQ 502
                C  CG    + S L  H + H + +  + + C         +  H K  H+G    +
Sbjct:   453 PYECEKCGKAFNQSSNLTRHKKSHTEEKPYKCEECGKGFKWPSTLTIH-KIIHTGEKPYK 511

Query:   503 CPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYK 562
             C  C K F + ++L+ H K IH   +    + CE C K F     L +H R HT EKPYK
Sbjct:   512 CEECGKAFNQSSKLTKH-KKIHTGEK---PYTCEECGKAFNQSSNLTKHKRIHTGEKPYK 567

Query:   563 CV-CGLGFNFNVSLKNHK 579
             C  C   F ++  L  HK
Sbjct:   568 CEECDKAFKWSSVLTKHK 585

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=TAS

GO:0003714 "transcription corepressor activity" evidence=TAS

UNIPROTKB|Q49A12 ZNF85 "Zinc finger protein 85" [Homo sapiens (taxid:9606)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 122/378 (32%), Positives = 167/378 (44%)

Query:   215 FKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGG 274
             +KC  C    N    L++H    ++H G+  PY  KC  C    N +  L  H K  H G
Sbjct:   171 YKCEECGKAFNQSSNLIKHK---KIHTGE-KPY--KCEECGKTFNRFSTLTTH-KIIHTG 223

Query:   275 YETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHS 334
              E    C  CG      STL  H ++  GE   K +E   C     +  +L  HK   H+
Sbjct:   224 -EKPYKCKECGKAFNRSSTLTTHRKIHTGEKPYKCEE---CGKAFKQSSNLTTHKI-IHT 278

Query:   335 GQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHT 393
             G+  + C  CGK F + A L  H     + H  EK Y CE C K F  +++L  H  +HT
Sbjct:   279 GEKPYKCKKCGKAFNQSAHLTTH----EVIHTGEKPYKCEKCGKAFNHFSHLTTHKIIHT 334

Query:   394 NEKPYKCKDCGAAFNHNVSLKNHKN----------SSCPKLYSYETYLKHLKTNHHGYEV 443
              EKPYKCK+CG AF H+ +L  HK             C K ++  + L   K  H G E 
Sbjct:   335 GEKPYKCKECGKAFKHSSTLTKHKIIHTGEKPYKCKECEKAFNQSSKLTEHKKIHTG-EK 393

Query:   444 SNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFF-LQ 502
                C  CG    + S L  H + H + +  + + C         +  H K  H+G    +
Sbjct:   394 PYECEKCGKAFNQSSNLTRHKKSHTEEKPYKCEECGKGFKWPSTLTIH-KIIHTGEKPYK 452

Query:   503 CPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYK 562
             C  C K F + ++L+ H K IH   +    + CE C K F     L +H R HT EKPYK
Sbjct:   453 CEECGKAFNQSSKLTKH-KKIHTGEK---PYTCEECGKAFNQSSNLTKHKRIHTGEKPYK 508

Query:   563 CV-CGLGFNFNVSLKNHK 579
             C  C   F ++  L  HK
Sbjct:   509 CEECDKAFKWSSVLTKHK 526

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|A6NN14 ZNF729 "Zinc finger protein 729" [Homo sapiens (taxid:9606)]

 Score = 452 (164.2 bits), Expect = 1.6e-41, P = 1.6e-41
 Identities = 123/379 (32%), Positives = 171/379 (45%)

Query:   216 KCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGY 275
             KC  C      +  L +H     +H  +     +KC  C    NS+  L++H K  H G 
Sbjct:   741 KCEECGKSFKHFSALRKHK---VIHTREKL---YKCEECVKAFNSFSALMKH-KVIHTG- 792

Query:   276 ETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHS--H 333
             E    C  CG   K  S L  H  +  GE   K      C+ C     H +  +KH   H
Sbjct:   793 EKPYKCEECGKAFKWSSKLTVHKVIHTGEKPCK------CEECGKAFKHFSALRKHKIIH 846

Query:   334 SGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVH 392
             +G+  + C  CGK F + ++L  H K IH     EK Y CE C K F   ++L  H  +H
Sbjct:   847 TGEKPYKCEECGKAFHQSSKLAKH-KKIHTG---EKPYKCEECGKAFNRLSHLTTHKIIH 902

Query:   393 TNEKPYKCKDCGAAFNHNVSLKNHKN----------SSCPKLYSYETYLKHLKTNHHGYE 442
             T +KPYKC++CG AFN + +L  HK             C + +S  + L   K  H G E
Sbjct:   903 TGKKPYKCEECGKAFNQSANLTTHKRIHTGEKPYKCEECGRAFSQSSTLTAHKIIHAG-E 961

Query:   443 VSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFF-L 501
                 C  CG   ++ STL  H   H   +  + + C    +++ H+  H K  HSG    
Sbjct:   962 KPYKCEECGKAFSQSSTLTTHKIIHTGEKFYKCEECGKAFSQLSHLTTH-KRIHSGEKPY 1020

Query:   502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPY 561
             +C  C K F + + L+ H K IH   +    + CE C+K F+   +L  H R HT EKPY
Sbjct:  1021 KCEECGKAFKQSSTLTTH-KRIHAGEKF---YKCEVCSKAFSRFSHLTTHKRIHTGEKPY 1076

Query:   562 KCV-CGLGFNFNVSLKNHK 579
             KC  CG  FN +  L  HK
Sbjct:  1077 KCEECGKAFNLSSQLTTHK 1095

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1LQ39 F1LQ39 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 442 (160.7 bits), Expect = 1.6e-41, P = 1.6e-41
 Identities = 134/393 (34%), Positives = 175/393 (44%)

Query:   205 IHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKL 264
             IH G   PY  KC  C    +    L  H      H G+  PY  +C  C    +S+  L
Sbjct:   250 IHTGD-KPY--KCNECGKVFSQTSSLTIHR---RTHTGE-KPY--RCNECGKVFSSHSNL 300

Query:   265 LRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKE-KKICDICSAEVV 323
               H ++ H G E    C  CG      S L NH R   GE   K  E  K   + S+   
Sbjct:   301 NTH-QAIHTG-EKPYKCSECGKVFTQNSHLANHWRTHTGEKPYKCNECGKAFSVYSSLTT 358

Query:   324 HLAIHKKHSHSGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFY 382
             HLAIH     +G+  + C  CGK FT+ + L  H +GIH     EK Y CE C K F   
Sbjct:   359 HLAIH-----TGEKPYKCEECGKVFTQNSHLANH-RGIHSG---EKPYKCEECGKHFNQT 409

Query:   383 NYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNH----------KNSSCPKLYSYETYLK 432
             + L RH RVHT EKPYKC +CG AF+   SL +H          K + C K++S  + L 
Sbjct:   410 SNLARHWRVHTGEKPYKCSECGKAFSVRSSLTSHQVIHTGEKPYKCAECGKVFSQTSSLS 469

Query:   433 HLKTNHHGYEVSNLCYICG-FFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGH 491
               +  H G E    C  CG  F++  +   H +   I    K  +  E  C +V+  N H
Sbjct:   470 IHQRIHTG-EKPYRCNECGKAFNSHSNLNTHQV---IHTGQKPYKCLE--CGKVFTQNSH 523

Query:   492 IKDKHSGFF----LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQY 547
             + + H         +C  C K F   + L+ H + IH   +    F C  C K FT   +
Sbjct:   524 LANHHRTHTGEKPYKCNECGKAFSVYSSLTTH-QAIHTGEK---PFKCNECGKVFTQNSH 579

Query:   548 LKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
             L  H RTHT EKPYKC  CG  F+   SL  H+
Sbjct:   580 LASHRRTHTGEKPYKCSKCGKAFSVRSSLTTHQ 612

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q8NB50 ZFP62 "Zinc finger protein 62 homolog" [Homo sapiens (taxid:9606)]

 Score = 449 (163.1 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 131/395 (33%), Positives = 179/395 (45%)

Query:   205 IHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKL 264
             IH G+  PY  KC  C     SY  L+ H      H G+ +    KC  C    N Y  +
Sbjct:   190 IHTGE-KPY--KCEECGKAYMSYSSLINHKS---THSGEKN---CKCDECGKSFN-YSSV 239

Query:   265 LRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVH 324
             L   K  H G E    C  CG   +N S L+ H R+  GE   K  E   CDIC     +
Sbjct:   240 LDQHKRIHTG-EKPYECGECGKAFRNSSGLRVHKRIHTGE---KPYE---CDICGKTFSN 292

Query:   325 ---LAIHKKHSHSGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFT 380
                L +HK+  H+G+  + C  CGK F     L  H K IH     +K Y C+ C K F 
Sbjct:   293 SSGLRVHKR-IHTGEKPYECDECGKAFITCRTLLNH-KSIHFG---DKPYKCDECEKSFN 347

Query:   381 FYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKN----------SSCPKLYSYETY 430
             + + L +H  +HT EKPY+C +CG AF ++  L  HK             C K +SY + 
Sbjct:   348 YSSLLIQHKVIHTGEKPYECDECGKAFRNSSGLIVHKRIHTGEKPYKCDVCGKAFSYSSG 407

Query:   431 LKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHING 490
             L   K+ H G +    C  CG   +  S L  H   H   R     +C++C  + +  N 
Sbjct:   408 LAVHKSIHPGKKAHE-CKECGKSFSYNSLLLQHRTIHTGER---PYVCDVC-GKTFRNNA 462

Query:   491 HIKDK---HSGFF-LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQ 546
              +K     H+G    +C  C K +  ++ L NH KGIH+  +    + C YC K F +  
Sbjct:   463 GLKVHRRLHTGEKPYKCDVCGKAYISRSSLKNH-KGIHLGEK---PYKCSYCEKSFNYSS 518

Query:   547 YLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHKQ 580
              L++H R HT EKP+ C  CG  F  N  LK HK+
Sbjct:   519 ALEQHKRIHTREKPFGCDECGKAFRNNSGLKVHKR 553

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q6PDB4 ZNF880 "Zinc finger protein 880" [Homo sapiens (taxid:9606)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 126/381 (33%), Positives = 174/381 (45%)

Query:   215 FKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGG 274
             +KC  CD   ++   L++H     +H G+  PY  KC  C    N    L RH +  H G
Sbjct:   212 YKCNECDKVFSNSSNLVQHQ---RIHTGE-KPY--KCHECGKLFNRISLLARHQRI-HTG 264

Query:   275 YETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHS 334
              E    C+ CG      S L NH R+  GE   K  E   C        HLA H+K  HS
Sbjct:   265 -EKPYKCHECGKVFTQNSHLANHHRIHTGEKPYKCNE---CGKVFNRNAHLARHQK-IHS 319

Query:   335 GQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHT 393
             G+  + C  CGK F+  + L  H+    + H  EK Y C  C K F    +L RH R+HT
Sbjct:   320 GEKPYKCKECGKAFSGGSGLTAHL----VIHTGEKLYKCNKCGKVFNRNAHLTRHQRIHT 375

Query:   394 NEKPYKCKDCGAAFNHNVSLKNH----------KNSSCPKLYSYETYLK-HLKTNHHGYE 442
              EKPY+CK+CG  F H   L NH          K + C K +   + L  HL   H G E
Sbjct:   376 GEKPYECKECGKVFRHKFCLTNHHRMHTGEQPYKCNECGKAFRDCSGLTAHLLI-HTG-E 433

Query:   443 VSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKH---SGF 499
                 C  C      R +L++H + H   +  +   C+ C  + +  N ++ + H   +G 
Sbjct:   434 KPYKCKECAKVFRHRLSLSNHQRFHTGEKPYR---CDECGKD-FTRNSNLANHHRIHTGE 489

Query:   500 F-LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNE 558
                +C  C K F   + L+ H + IH   +   ++ C  C K F+   YLK+H R HT E
Sbjct:   490 KPYKCSECHKVFSHNSHLARH-RQIHTGEK---SYKCNECGKVFSHKLYLKKHERIHTGE 545

Query:   559 KPYKC-VCGLGFNFNVSLKNH 578
             KPY+C  CG  F  N +L NH
Sbjct:   546 KPYRCHECGKDFTRNSNLANH 566

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	606
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	3e-05

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 17/26 (65%), Positives = 19/26 (73%)

Query: 384 YLRRHMRVHTNEKPYKCKDCGAAFNH 409
            LRRHMR HT EKPYKC  CG +F+ 
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	606
KOG1074|consensus	958		99.95
KOG2462|consensus	279		99.94
KOG2462|consensus	279		99.91
KOG3608|consensus	467		99.91
KOG3623|consensus	1007		99.91
KOG3608|consensus	467		99.89
KOG1074|consensus	958		99.88
KOG3623|consensus	1007		99.8
KOG3576|consensus	267		99.63
KOG3576|consensus	267		99.61
PLN03086	567	PRLI-interacting factor K; Provisional	99.21
PHA00733	128	hypothetical protein	99.12
PLN03086	567	PRLI-interacting factor K; Provisional	99.05
PHA02768	55	hypothetical protein; Provisional	98.94
PHA00733	128	hypothetical protein	98.84
KOG3993|consensus	500		98.69
KOG3993|consensus	500		98.68
PHA02768	55	hypothetical protein; Provisional	98.67
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.56
PHA00616	44	hypothetical protein	98.41
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.4
PHA00616	44	hypothetical protein	98.25
PHA00732	79	hypothetical protein	98.13
PHA00732	79	hypothetical protein	98.09
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.03
PF01352	41	KRAB: KRAB box; InterPro: IPR001909 The Krueppel-a	98.0
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.99
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.74
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.38
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.33
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.32
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.19
KOG2231|consensus	669		97.02
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.01
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.0
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.0
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.94
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.91
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.88
KOG2231|consensus	669		96.71
smart00355	26	ZnF_C2H2 zinc finger.	96.64
KOG1146|consensus	1406		96.58
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.26
PRK04860	160	hypothetical protein; Provisional	96.25
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.01
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.87
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.78
smart00355	26	ZnF_C2H2 zinc finger.	95.55
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.54
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.34
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.15
KOG2482|consensus	423		95.0
PRK04860	160	hypothetical protein; Provisional	94.95
KOG2785|consensus	390		94.69
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.46
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.43
KOG2785|consensus	390		94.21
KOG1146|consensus	1406		94.06
smart00349	61	KRAB krueppel associated box.	93.8
KOG2482|consensus	423		93.71
COG5048	467	FOG: Zn-finger [General function prediction only]	93.48
KOG2893|consensus	341		93.47
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.03
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.24
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.29
COG5048	467	FOG: Zn-finger [General function prediction only]	89.26
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	88.36
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	88.29
KOG4173|consensus	253		88.11
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	87.55
COG4049	65	Uncharacterized protein containing archaeal-type C	86.83
KOG4173|consensus	253		86.21
KOG2893|consensus	341		86.07
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	84.66
COG4049	65	Uncharacterized protein containing archaeal-type C	83.71
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	82.68
KOG2186|consensus	276		80.97

>KOG1074|consensus

Probab=99.95  E-value=1.1e-28  Score=254.17  Aligned_cols=242  Identities=22%  Similarity=0.357  Sum_probs=164.0

Q ss_pred             cceecccCccccCCHHHHHHHHhccccccCCCCcccccccccccCchHHHHhhhhhcCCC----CccccC---cchhccC
Q psy15165        336 QYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNE----KPYKCK---DCGAAFN  408 (606)
Q Consensus       336 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~----~~~~C~---~C~~~f~  408 (606)
                      .|.+|-+|-+.....++|+.|.+    +|+|++||+|.+||+.|+++.+|+.||.+|...    .+|.|+   +|-+.|.
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyr----tHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kft  679 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYR----THTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFT  679 (958)
T ss_pred             Cccceeeeeecccchhhhhhhhh----cccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccc
Confidence            35789999999999999999999    899999999999999999999999999999754    347899   9999999


Q ss_pred             ChhHHhcccccCCCCCCChHHHHHHHHHhcCCCCCcccCCCCCCccCCHHHHHHHHHHhcCCCC----------------
Q psy15165        409 HNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRM----------------  472 (606)
Q Consensus       409 ~~~~L~~H~~~~C~~~f~~~~~l~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~----------------  472 (606)
                      ....|..|++.+-+-....-....      .+....-.|..|.+.|.....+..++..|.+...                
T Consensus       680 n~V~lpQhIriH~~~~~s~g~~a~------e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~  753 (958)
T KOG1074|consen  680 NAVTLPQHIRIHLGGQISNGGTAA------EGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELD  753 (958)
T ss_pred             ccccccceEEeecCCCCCCCcccc------cccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccc
Confidence            999999998753311111000000      0001224599999999999999999887732211                


Q ss_pred             -CcCccccccccch---hhhhc-----------------------ccccccCCccc-cCCCCCCcCCChHHHHHhhhccc
Q psy15165        473 -KQKQICEICCAEV---YHING-----------------------HIKDKHSGFFL-QCPHCPKTFPRKTELSNHIKGIH  524 (606)
Q Consensus       473 -~~~~~C~~c~~~~---~~l~~-----------------------H~~~~h~~~~~-~C~~C~~~f~~~~~L~~H~~~~H  524 (606)
                       ..-..+..|+...   ..+..                       +.....++.+. .+..++-.........- +.+.-
T Consensus       754 ~tp~~~e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~p-vl~~~  832 (958)
T KOG1074|consen  754 VTPPPPENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDP-VLWNQ  832 (958)
T ss_pred             cCCCccccccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCc-hhhcc
Confidence             1113344454111   00000                       01111222333 56666644333221110 00000


Q ss_pred             ---------------ccCCC------------------------CccccccccchhccChhhHHHHHhhhcCCCCcccc-
Q psy15165        525 ---------------MKHEL------------------------RQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-  564 (606)
Q Consensus       525 ---------------~~~~~------------------------~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-  564 (606)
                                     ..+.+                        .....|.+||+.|.+.++|..|||+|+|+|||.|. 
T Consensus       833 ~~~~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~f  912 (958)
T KOG1074|consen  833 ETSMLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHF  912 (958)
T ss_pred             cccccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchh
Confidence                           00000                        11268999999999999999999999999999998 


Q ss_pred             cCccCCchhhHHHhhhccccccch
Q psy15165        565 CGLGFNFNVSLKNHKQKCSVFLLT  588 (606)
Q Consensus       565 C~~~F~~~~~L~~H~~~h~~~~~~  588 (606)
                      |+++|..+.+|+.||.+|....|+
T Consensus       913 C~~aFttrgnLKvHMgtH~w~q~~  936 (958)
T KOG1074|consen  913 CEEAFTTRGNLKVHMGTHMWVQPP  936 (958)
T ss_pred             hhhhhhhhhhhhhhhccccccCCC
Confidence            999999999999999999976654

>KOG2462|consensus

Probab=99.94  E-value=1.5e-27  Score=217.99  Aligned_cols=136  Identities=30%  Similarity=0.596  Sum_probs=118.1

Q ss_pred             CccccCcchhccCChhHHhcccccCCCCCCChHHHHHHHHHhcCCCCCcccCCCCCCccCCHHHHHHHHHHhcCCCCCcC
Q psy15165        396 KPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQK  475 (606)
Q Consensus       396 ~~~~C~~C~~~f~~~~~L~~H~~~~C~~~f~~~~~l~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~  475 (606)
                      ..|+|+.||+.+.+..+|.+|+..+|+.                ...+.+.|++||+.+.+-..|..|+++|+-  +   
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~----------------~s~ka~~C~~C~K~YvSmpALkMHirTH~l--~---  187 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSL----------------DSKKAFSCKYCGKVYVSMPALKMHIRTHTL--P---  187 (279)
T ss_pred             Cceeccccccccccccccchhhcccccc----------------cccccccCCCCCceeeehHHHhhHhhccCC--C---
Confidence            3466666777777666777666655442                115678999999999999999999999862  2   


Q ss_pred             ccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhh
Q psy15165        476 QICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTH  555 (606)
Q Consensus       476 ~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H  555 (606)
                                               +.|.+|||.|.....|+-|+| .|   ||||||.|..|+|+|..+++|+.||+||
T Consensus       188 -------------------------c~C~iCGKaFSRPWLLQGHiR-TH---TGEKPF~C~hC~kAFADRSNLRAHmQTH  238 (279)
T KOG2462|consen  188 -------------------------CECGICGKAFSRPWLLQGHIR-TH---TGEKPFSCPHCGKAFADRSNLRAHMQTH  238 (279)
T ss_pred             -------------------------cccccccccccchHHhhcccc-cc---cCCCCccCCcccchhcchHHHHHHHHhh
Confidence                                     789999999999999999999 66   9999999999999999999999999999


Q ss_pred             cCCCCcccc-cCccCCchhhHHHhhhc
Q psy15165        556 TNEKPYKCV-CGLGFNFNVSLKNHKQK  581 (606)
Q Consensus       556 ~~~kp~~C~-C~~~F~~~~~L~~H~~~  581 (606)
                      .+.|+|.|. |+++|+..+.|.+|...
T Consensus       239 S~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  239 SDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             cCCccccCcchhhHHHHHHHHHHhhhh
Confidence            999999998 99999999999999865

>KOG2462|consensus

Probab=99.91  E-value=1.4e-25  Score=205.24  Aligned_cols=139  Identities=32%  Similarity=0.563  Sum_probs=111.3

Q ss_pred             ccccccccccCCHHHHHHhHhhhcCC-CCCCcccCccccccCCHHHHHHHHHHhhCCccccccccccccccccchHhHHH
Q psy15165        249 FKCRVCDWKLNSYDKLLRHIKSDHGG-YETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAI  327 (606)
Q Consensus       249 ~~C~~C~~~f~~~~~L~~H~~~~H~~-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~C~~C~~~~~~l~~  327 (606)
                      |+|+.|++.+.+..+|.+|...|-.. ..+.+.|..||+.|.+...|+.|+++|.-                        
T Consensus       131 ~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l------------------------  186 (279)
T KOG2462|consen  131 YKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTL------------------------  186 (279)
T ss_pred             eeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCC------------------------
Confidence            55555555555555555555532221 13457788888888888888888877742                        


Q ss_pred             HHHhccCCcceecccCccccCCHHHHHHHHhccccccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcchhcc
Q psy15165        328 HKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAF  407 (606)
Q Consensus       328 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f  407 (606)
                               ++.|.+||+.|.....|+-|++    +|+|||||.|..|++.|..+++|+.||++|.+.++|+|..|+|+|
T Consensus       187 ---------~c~C~iCGKaFSRPWLLQGHiR----THTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsF  253 (279)
T KOG2462|consen  187 ---------PCECGICGKAFSRPWLLQGHIR----THTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSF  253 (279)
T ss_pred             ---------CcccccccccccchHHhhcccc----cccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHH
Confidence                     4788888889998889999998    899999999999999999999999999999999999999999999


Q ss_pred             CChhHHhcccccCCCCC
Q psy15165        408 NHNVSLKNHKNSSCPKL  424 (606)
Q Consensus       408 ~~~~~L~~H~~~~C~~~  424 (606)
                      ..++.|.+|..+.|-+.
T Consensus       254 sl~SyLnKH~ES~C~~~  270 (279)
T KOG2462|consen  254 ALKSYLNKHSESACLKY  270 (279)
T ss_pred             HHHHHHHHhhhhccccc
Confidence            99999999988777653

>KOG3608|consensus

Probab=99.91  E-value=3.4e-24  Score=200.13  Aligned_cols=230  Identities=25%  Similarity=0.465  Sum_probs=171.3

Q ss_pred             cccC--ccccccCCHHHHHHHHHHhhCCccccccccccccccccchHhHHHHHHhccC-C-cceeccc--CccccCCHHH
Q psy15165        279 SLCY--HCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHS-G-QYHVCPH--CGKKFTRKAE  352 (606)
Q Consensus       279 ~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~C~~C~~~~~~l~~h~~~~~~-~-~~~~C~~--C~~~f~~~~~  352 (606)
                      |.|.  .|+..|.+...|..|+..|.-.          |++   .       +..... + ..+.|..  |-+.|.+++.
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~H~l~----------cey---d-------~~~~~~D~~pv~~C~W~~Ct~~~~~k~~  194 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVKHALF----------CEY---D-------IQKTPEDERPVTMCNWAMCTKHMGNKYR  194 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHHhhhh----------hhh---h-------hhhCCCCCCceeeccchhhhhhhccHHH
Confidence            5564  6999999999999999877532          110   0       010111 1 3366754  8888999999


Q ss_pred             HHHHHhccccccCCCCcccccccccccCchHHHHhhhhhcC--CCCccccCcchhccCChhHHhcccccCCCCCCChHHH
Q psy15165        353 LQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHT--NEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETY  430 (606)
Q Consensus       353 l~~H~~~~h~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C~~~f~~~~~L~~H~~~~C~~~f~~~~~  430 (606)
                      |+.|++    .|++++...|+.||..|+++..|..|++.-+  ...+|+|..|.+.|.+...|..|+.            
T Consensus       195 LreH~r----~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~------------  258 (467)
T KOG3608|consen  195 LREHIR----THSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVV------------  258 (467)
T ss_pred             HHHHHH----hcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHH------------
Confidence            999998    7889999999999999999999999977544  4568999999999998888877754            


Q ss_pred             HHHHHHhcCCCCCcccCCCCCCccCCHHHHHHHHHH-hcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCc
Q psy15165        431 LKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQD-HIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKT  509 (606)
Q Consensus       431 l~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~  509 (606)
                            .|   -..|+|+.|+.+...++.|..|++. |..++|                            |+|+.|++.
T Consensus       259 ------rH---vn~ykCplCdmtc~~~ssL~~H~r~rHs~dkp----------------------------fKCd~Cd~~  301 (467)
T KOG3608|consen  259 ------RH---VNCYKCPLCDMTCSSASSLTTHIRYRHSKDKP----------------------------FKCDECDTR  301 (467)
T ss_pred             ------Hh---hhcccccccccCCCChHHHHHHHHhhhccCCC----------------------------ccccchhhh
Confidence                  22   3468899999998888888888876 444444                            788888888


Q ss_pred             CCChHHHHHhhhcccccCCCCccccccc--cchhccChhhHHHHHhhhc-CC--CCcccc-cCccCCchhhHHHhhhccc
Q psy15165        510 FPRKTELSNHIKGIHMKHELRQTFVCEY--CNKEFTFLQYLKRHMRTHT-NE--KPYKCV-CGLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       510 f~~~~~L~~H~~~~H~~~~~~k~y~C~~--C~k~f~~~~~L~~H~~~H~-~~--kp~~C~-C~~~F~~~~~L~~H~~~h~  583 (606)
                      |.+.+.|.+|+. +|   . +-.|.|..  |.++|.+...|++|++-|+ |.  -+|.|. |++.|++..+|..|+++-|
T Consensus       302 c~~esdL~kH~~-~H---S-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH  376 (467)
T KOG3608|consen  302 CVRESDLAKHVQ-VH---S-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKH  376 (467)
T ss_pred             hccHHHHHHHHH-hc---c-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhh
Confidence            888888888877 56   3 55688877  8888888888888877544 43  458887 8888888888888877666


Q ss_pred             ccc
Q psy15165        584 VFL  586 (606)
Q Consensus       584 ~~~  586 (606)
                      +.+
T Consensus       377 ~f~  379 (467)
T KOG3608|consen  377 GFR  379 (467)
T ss_pred             ccc
Confidence            554

>KOG3623|consensus

Probab=99.91  E-value=1.3e-25  Score=227.21  Aligned_cols=121  Identities=28%  Similarity=0.506  Sum_probs=96.6

Q ss_pred             ccccccccccCCHHHHHHhHhhhcCCCCCCcccCccccccCCHHHHHHHHHHhhCCccccccccccccccccchHhHHHH
Q psy15165        249 FKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIH  328 (606)
Q Consensus       249 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~C~~C~~~~~~l~~h  328 (606)
                      ..|++|...+.....|..|++..|...+..|.|..|.++|..+..|.+||.+|.......                  .+
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa------------------~s  272 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQA------------------IS  272 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCccc------------------cc
Confidence            578888888888888888887777665777889999999999999999988886542210                  00


Q ss_pred             HHhccCCcceecccCccccCCHHHHHHHHhccccccCCCCcccccccccccCchHHHHhhhhh
Q psy15165        329 KKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRV  391 (606)
Q Consensus       329 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~  391 (606)
                      ....-..+.|+|..||+.|..+..|+.|++    +|.|++||.|+-|+|+|.....+..||..
T Consensus       273 ltqsa~lRKFKCtECgKAFKfKHHLKEHlR----IHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  273 LTQSALLRKFKCTECGKAFKFKHHLKEHLR----IHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             ccchhhhccccccccchhhhhHHHHHhhhe----eecCCCCcCCcccccccccCCcccccccc
Confidence            000111267999999999999999999999    99999999999999999999999999753

>KOG3608|consensus

Probab=99.89  E-value=1.7e-23  Score=195.45  Aligned_cols=239  Identities=26%  Similarity=0.493  Sum_probs=180.9

Q ss_pred             cccc--ccccccCCHHHHHHhHhhhcCC-----------CC-CCcccC--ccccccCCHHHHHHHHHHhhCCcccccccc
Q psy15165        249 FKCR--VCDWKLNSYDKLLRHIKSDHGG-----------YE-TSSLCY--HCGYYSKNRSTLKNHVRVEHGENQAKRKEK  312 (606)
Q Consensus       249 ~~C~--~C~~~f~~~~~L~~H~~~~H~~-----------~~-~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  312 (606)
                      |.|.  .|+..|.+...|..|+. +|..           .+ ..+.|.  -|.+.|.++..|++|++.|.++        
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~-~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~e--------  205 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVV-KHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNE--------  205 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHH-HhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCC--------
Confidence            5564  47888888888888876 4431           01 123454  4777777777777777777665        


Q ss_pred             ccccccccchHhHHHHHHhccCCcceecccCccccCCHHHHHHHHhccccccCCCCcccccccccccCchHHHHhhhhhc
Q psy15165        313 KICDICSAEVVHLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVH  392 (606)
Q Consensus       313 ~~C~~C~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H  392 (606)
                                             +...|+.||..|.++..|-.|++.-  +-....+|.|..|.|.|.+...|..|+..|
T Consensus       206 -----------------------KvvACp~Cg~~F~~~tkl~DH~rRq--t~l~~n~fqC~~C~KrFaTeklL~~Hv~rH  260 (467)
T KOG3608|consen  206 -----------------------KVVACPHCGELFRTKTKLFDHLRRQ--TELNTNSFQCAQCFKRFATEKLLKSHVVRH  260 (467)
T ss_pred             -----------------------eEEecchHHHHhccccHHHHHHHhh--hhhcCCchHHHHHHHHHhHHHHHHHHHHHh
Confidence                                   4467899999999999999998743  223346899999999999999999999988


Q ss_pred             CCCCccccCcchhccCChhHHhcccccCCCCCCChHHHHHHHHHhcCCCCCcccCCCCCCccCCHHHHHHHHHHhcCCCC
Q psy15165        393 TNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRM  472 (606)
Q Consensus       393 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~C~~~f~~~~~l~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  472 (606)
                      -  .-|+|+.|+.+....++|..|++.                 . +...+||+|+.|++.|.+.+.|..|...|. +. 
T Consensus       261 v--n~ykCplCdmtc~~~ssL~~H~r~-----------------r-Hs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~-  318 (467)
T KOG3608|consen  261 V--NCYKCPLCDMTCSSASSLTTHIRY-----------------R-HSKDKPFKCDECDTRCVRESDLAKHVQVHS-KT-  318 (467)
T ss_pred             h--hcccccccccCCCChHHHHHHHHh-----------------h-hccCCCccccchhhhhccHHHHHHHHHhcc-cc-
Confidence            6  468999999999999888888652                 2 333889999999999999999999998775 21 


Q ss_pred             CcCccccccccchhhhhcccccccCCccccCCC--CCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHH
Q psy15165        473 KQKQICEICCAEVYHINGHIKDKHSGFFLQCPH--CPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKR  550 (606)
Q Consensus       473 ~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~  550 (606)
                                                 .|.|..  |.++|.+...|++|++.+| .....-+|.|..|++.|++-.+|.+
T Consensus       319 ---------------------------~y~C~h~~C~~s~r~~~q~~~H~~evh-Eg~np~~Y~CH~Cdr~ft~G~~L~~  370 (467)
T KOG3608|consen  319 ---------------------------VYQCEHPDCHYSVRTYTQMRRHFLEVH-EGNNPILYACHCCDRFFTSGKSLSA  370 (467)
T ss_pred             ---------------------------ceecCCCCCcHHHHHHHHHHHHHHHhc-cCCCCCceeeecchhhhccchhHHH
Confidence                                       289988  9999999999999999777 2245667999999999999999999


Q ss_pred             HHhhhcC------CCCcccc-cCccCCc
Q psy15165        551 HMRTHTN------EKPYKCV-CGLGFNF  571 (606)
Q Consensus       551 H~~~H~~------~kp~~C~-C~~~F~~  571 (606)
                      |++.-++      -+.|.=. |.-+|.+
T Consensus       371 HL~kkH~f~~PsGh~RFtYk~~edG~mR  398 (467)
T KOG3608|consen  371 HLMKKHGFRLPSGHKRFTYKVDEDGFMR  398 (467)
T ss_pred             HHHHhhcccCCCCCCceeeeeccCceee
Confidence            9765443      2344443 5555543

>KOG1074|consensus

Probab=99.88  E-value=9.9e-24  Score=217.88  Aligned_cols=243  Identities=21%  Similarity=0.325  Sum_probs=172.7

Q ss_pred             ccccccccccc---hHhHHHHHHhccCCcceecccCccccCCHHHHHHHHhccccccCCCCccccc---ccccccCchHH
Q psy15165        311 EKKICDICSAE---VVHLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICE---YCHKEFTFYNY  384 (606)
Q Consensus       311 ~~~~C~~C~~~---~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~h~~~~~~~C~---~C~k~f~~~~~  384 (606)
                      .+..|-+|-+.   .+.|..|.+.|.+++||+|.+||+.|.++.+|+.||-.+...+...-.+.|+   +|-+.|...-.
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVT  683 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccc
Confidence            45679999984   4689999998888899999999999999999999998554555556779999   99999999999


Q ss_pred             HHhhhhhcCCC-Cc------------cccCcchhccCChhHHhcccccCCCCCCChHHHHHHHHHhcCC---CCCcccCC
Q psy15165        385 LRRHMRVHTNE-KP------------YKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHG---YEVSNLCY  448 (606)
Q Consensus       385 L~~H~~~H~~~-~~------------~~C~~C~~~f~~~~~L~~H~~~~C~~~f~~~~~l~~h~~~~~~---~~~~~~C~  448 (606)
                      |..|+++|.+. .+            -+|..|.+.|.....+..++...++..-.-  ......+.+..   ...+..+.
T Consensus       684 lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~--~~~~~~~t~t~~~~~tp~~~e~  761 (958)
T KOG1074|consen  684 LPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEP--DEQMDERTETEELDVTPPPPEN  761 (958)
T ss_pred             ccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCC--cccccccccccccccCCCcccc
Confidence            99999999832 11            369999999999888888876555432211  01111122221   12366788


Q ss_pred             CCCCccCCHHHHHHHHHHh-----------------------cCCCCCcCccccccccch---------------hhhhc
Q psy15165        449 ICGFFSAKRSTLAHHIQDH-----------------------IQPRMKQKQICEICCAEV---------------YHING  490 (606)
Q Consensus       449 ~C~~~f~~~~~L~~H~~~h-----------------------~~~~~~~~~~C~~c~~~~---------------~~l~~  490 (606)
                      .|+..+.....+..+-..+                       +.+++.  ..+.+++...               +.|..
T Consensus       762 ~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~--~~~~~~~~~~~~~v~~~pvl~~~~~~~l~e  839 (958)
T KOG1074|consen  762 SCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPT--QASSFPGEILAPSVNMDPVLWNQETSMLNE  839 (958)
T ss_pred             ccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCc--ccccCCCcCCccccccCchhhccccccccc
Confidence            8888877666655443222                       333332  1344443100               00000


Q ss_pred             cccc----------------------------ccC--CccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccch
Q psy15165        491 HIKD----------------------------KHS--GFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNK  540 (606)
Q Consensus       491 H~~~----------------------------~h~--~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k  540 (606)
                      -...                            ...  ..+..|..||+.|.+.++|..|++ .|   +++|||.|.+|++
T Consensus       840 g~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~r-TH---tg~KPF~C~fC~~  915 (958)
T KOG1074|consen  840 GLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMR-TH---TGPKPFFCHFCEE  915 (958)
T ss_pred             ccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhh-cC---CCCCCccchhhhh
Confidence            0000                            000  012679999999999999999999 56   9999999999999


Q ss_pred             hccChhhHHHHHhhhcCCCCc
Q psy15165        541 EFTFLQYLKRHMRTHTNEKPY  561 (606)
Q Consensus       541 ~f~~~~~L~~H~~~H~~~kp~  561 (606)
                      .|..+.+|+.||.+|.+..|+
T Consensus       916 aFttrgnLKvHMgtH~w~q~~  936 (958)
T KOG1074|consen  916 AFTTRGNLKVHMGTHMWVQPP  936 (958)
T ss_pred             hhhhhhhhhhhhccccccCCC
Confidence            999999999999999987664

>KOG3623|consensus

Probab=99.80  E-value=1.2e-20  Score=191.65  Aligned_cols=101  Identities=25%  Similarity=0.511  Sum_probs=86.1

Q ss_pred             CcccccCccccCCHHHHHhhhhccccccCCCCCCcccccccccccCCHHHHHHhHhhhcCCC-----------CCCcccC
Q psy15165        214 EFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGY-----------ETSSLCY  282 (606)
Q Consensus       214 ~~~C~~C~~~f~~~~~l~~H~~~~~~h~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~-----------~~~~~C~  282 (606)
                      ...|+.|++.+.....|..|+++.+.-    .+..|.|.+|..+|..+..|.+||..|-.+.           .+.|+|.
T Consensus       210 lltcpycdrgykrltslkeHikyrhek----ne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCt  285 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEK----NEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCT  285 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhh----CCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhcccccc
Confidence            578999999999999999999864322    3345999999999999999999998553321           2569999


Q ss_pred             ccccccCCHHHHHHHHHHhhCCccccccccccccccccchHh
Q psy15165        283 HCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVH  324 (606)
Q Consensus       283 ~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~C~~C~~~~~~  324 (606)
                      +||+.|..+..|+.|+|+|.|+      ++|.|+-|.+.|++
T Consensus       286 ECgKAFKfKHHLKEHlRIHSGE------KPfeCpnCkKRFSH  321 (1007)
T KOG3623|consen  286 ECGKAFKFKHHLKEHLRIHSGE------KPFECPNCKKRFSH  321 (1007)
T ss_pred             ccchhhhhHHHHHhhheeecCC------CCcCCccccccccc
Confidence            9999999999999999999999      88999999997754

>KOG3576|consensus

Probab=99.63  E-value=1.1e-16  Score=138.68  Aligned_cols=114  Identities=25%  Similarity=0.411  Sum_probs=101.4

Q ss_pred             CCcccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHhhh
Q psy15165        442 EVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIK  521 (606)
Q Consensus       442 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~  521 (606)
                      ...|.|.+||+.|.....|.+|++-|...+.                            |.|..||+.|.....|++|++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr----------------------------~lct~cgkgfndtfdlkrh~r  166 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKR----------------------------HLCTFCGKGFNDTFDLKRHTR  166 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHH----------------------------HHHhhccCcccchhhhhhhhc
Confidence            4568999999999999999999998865444                            899999999999999999999


Q ss_pred             cccccCCCCccccccccchhccChhhHHHHHhhhcC-----------CCCcccc-cCccCCchhhHHHhhhccccccc
Q psy15165        522 GIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTN-----------EKPYKCV-CGLGFNFNVSLKNHKQKCSVFLL  587 (606)
Q Consensus       522 ~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~-----------~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~  587 (606)
                       .|   +|.+||+|..|+++|++.-.|..|++.-+|           .+-|.|. ||++-.....+..|++.|+..-|
T Consensus       167 -th---tgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  167 -TH---TGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             -cc---cCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence             56   999999999999999999999999875443           4679998 99999999999999999997644

>KOG3576|consensus

Probab=99.61  E-value=2.1e-16  Score=137.00  Aligned_cols=126  Identities=30%  Similarity=0.486  Sum_probs=108.0

Q ss_pred             CcceecccCccccCCHHHHHHHHhccccccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcchhccCChhHHh
Q psy15165        335 GQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLK  414 (606)
Q Consensus       335 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~  414 (606)
                      +..|.|.+|++.|.-...|.+|++    -|...+.+-|..||+.|.....|++|+++|+|.+||+|..|+++|...-.|.
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~k----ch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsle  190 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLK----CHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLE  190 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhh----hccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHH
Confidence            467999999999999999999999    8988999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCChHHHHHHHHHhcCCCCCcccCCCCCCccCCHHHHHHHHHHhcCCCC
Q psy15165        415 NHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRM  472 (606)
Q Consensus       415 ~H~~~~C~~~f~~~~~l~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  472 (606)
                      .|++.+.+-.-.+    ..-    ....+.|.|..||++-.....+..|++.|+...|
T Consensus       191 shl~kvhgv~~~y----ayk----err~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  191 SHLKKVHGVQHQY----AYK----ERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHHHHHcCchHHH----HHH----HhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            9987554432111    000    1126789999999999999999999999876554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.21  E-value=3.7e-11  Score=125.00  Aligned_cols=145  Identities=19%  Similarity=0.380  Sum_probs=104.9

Q ss_pred             ccccccccccCchHHHHhhhhhcCCCCccccCc--chhccCChhHHhcccccCCCCCCChHHHHHHHHHhcCCCCCcccC
Q psy15165        370 YICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKD--CGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLC  447 (606)
Q Consensus       370 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~~C~~~f~~~~~l~~h~~~~~~~~~~~~C  447 (606)
                      ..|..|...... ..|..|...-. -..-.|+.  ||..|.. ..|..                            .+.|
T Consensus       408 V~C~NC~~~i~l-~~l~lHe~~C~-r~~V~Cp~~~Cg~v~~r-~el~~----------------------------H~~C  456 (567)
T PLN03086        408 VECRNCKHYIPS-RSIALHEAYCS-RHNVVCPHDGCGIVLRV-EEAKN----------------------------HVHC  456 (567)
T ss_pred             EECCCCCCccch-hHHHHHHhhCC-CcceeCCcccccceeec-ccccc----------------------------CccC
Confidence            457777766553 34556653322 23446774  8887743 23333                            3469


Q ss_pred             CCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHhhhcccccC
Q psy15165        448 YICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKH  527 (606)
Q Consensus       448 ~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  527 (606)
                      +.|++.|. ...|..|++.|+  .+                            |.|+ ||+.+ .+..|..|+. .|   
T Consensus       457 ~~Cgk~f~-~s~LekH~~~~H--kp----------------------------v~Cp-Cg~~~-~R~~L~~H~~-th---  499 (567)
T PLN03086        457 EKCGQAFQ-QGEMEKHMKVFH--EP----------------------------LQCP-CGVVL-EKEQMVQHQA-ST---  499 (567)
T ss_pred             CCCCCccc-hHHHHHHHHhcC--CC----------------------------ccCC-CCCCc-chhHHHhhhh-cc---
Confidence            99999885 677889988874  33                            8899 99765 6689999987 45   


Q ss_pred             CCCccccccccchhcc----------ChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhcccc
Q psy15165        528 ELRQTFVCEYCNKEFT----------FLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSV  584 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~----------~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~  584 (606)
                      .+.+++.|.+|++.|.          ..+.|..|..++ |.+++.|. ||+.|.. ..|..|+...|.
T Consensus       500 Cp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrl-rdm~~H~~~~h~  565 (567)
T PLN03086        500 CPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVML-KEMDIHQIAVHQ  565 (567)
T ss_pred             CCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeee-hhHHHHHHHhhc
Confidence            8889999999999995          245899999886 89999998 9999855 568889877664

>PHA00733 hypothetical protein

Probab=99.12  E-value=4.6e-11  Score=101.43  Aligned_cols=83  Identities=22%  Similarity=0.268  Sum_probs=72.2

Q ss_pred             cccCCCCCCcCCChHHHHHh--hhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHH
Q psy15165        500 FLQCPHCPKTFPRKTELSNH--IKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLK  576 (606)
Q Consensus       500 ~~~C~~C~~~f~~~~~L~~H--~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~  576 (606)
                      ++.|.+|...|.....|..|  ++ .|+.+.+.+||.|+.||+.|.+...|..|++.|  +.+|.|. |+++|.....|.
T Consensus        40 ~~~~~~~~~~~~~~~~l~~~~~l~-~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~  116 (128)
T PHA00733         40 RLIRAVVKTLIYNPQLLDESSYLY-KLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTL  116 (128)
T ss_pred             hHHHHHHhhhccChhhhcchHHHH-hhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHH
Confidence            38999999999998888887  44 334446689999999999999999999999987  4689998 999999999999


Q ss_pred             Hhhhccccc
Q psy15165        577 NHKQKCSVF  585 (606)
Q Consensus       577 ~H~~~h~~~  585 (606)
                      .|+++.|++
T Consensus       117 ~H~~~~h~~  125 (128)
T PHA00733        117 DHVCKKHNI  125 (128)
T ss_pred             HHHHHhcCc
Confidence            999988864

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.05  E-value=5.1e-10  Score=116.64  Aligned_cols=101  Identities=25%  Similarity=0.560  Sum_probs=57.7

Q ss_pred             ccccccccccCchHHHHhhhhhcCCCCccccCcchhccCChhHHhcccccCCCCCCChHHHHHHHHHhcCCCCCcccCCC
Q psy15165        370 YICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYI  449 (606)
Q Consensus       370 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~C~~~f~~~~~l~~h~~~~~~~~~~~~C~~  449 (606)
                      +.|+.|++.|. ...|..|+.+|+  +++.|+ ||+.+ ....|..|+..+|+                   .+++.|..
T Consensus       454 ~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp-------------------~Kpi~C~f  509 (567)
T PLN03086        454 VHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCP-------------------LRLITCRF  509 (567)
T ss_pred             ccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCC-------------------CCceeCCC
Confidence            45666766664 455666666654  566666 66543 34555555443333                   55666777


Q ss_pred             CCCccCC----------HHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHh
Q psy15165        450 CGFFSAK----------RSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNH  519 (606)
Q Consensus       450 C~~~f~~----------~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H  519 (606)
                      |++.|..          .+.|..|.... +.++                            +.|..||+.|.. ..|..|
T Consensus       510 C~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt----------------------------~~C~~Cgk~Vrl-rdm~~H  559 (567)
T PLN03086        510 CGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRT----------------------------APCDSCGRSVML-KEMDIH  559 (567)
T ss_pred             CCCccccCccccchhhhhhhHHHHHHhc-CCcc----------------------------eEccccCCeeee-hhHHHH
Confidence            7666631          23555555543 3333                            667777766654 346666


Q ss_pred             hhccc
Q psy15165        520 IKGIH  524 (606)
Q Consensus       520 ~~~~H  524 (606)
                      +..+|
T Consensus       560 ~~~~h  564 (567)
T PLN03086        560 QIAVH  564 (567)
T ss_pred             HHHhh
Confidence            66555

>PHA02768 hypothetical protein; Provisional

Probab=98.94  E-value=3.3e-10  Score=78.23  Aligned_cols=42  Identities=17%  Similarity=0.263  Sum_probs=33.0

Q ss_pred             ccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHH
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLK  576 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~  576 (606)
                      |.|+.||+.|+..++|..|+++|+  +||+|. |++.|.+.+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            778888888888888888888887  678887 888887776654

>PHA00733 hypothetical protein

Probab=98.84  E-value=4.1e-09  Score=89.56  Aligned_cols=87  Identities=18%  Similarity=0.253  Sum_probs=70.2

Q ss_pred             CCcccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHhhh
Q psy15165        442 EVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIK  521 (606)
Q Consensus       442 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~  521 (606)
                      .+++.|.+|...|.....|..|...                      ..|+.. ++..+|.|+.||+.|.+...|..|++
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l----------------------~~~~~~-~~~kPy~C~~Cgk~Fss~s~L~~H~r   94 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYL----------------------YKLLTS-KAVSPYVCPLCLMPFSSSVSLKQHIR   94 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHH----------------------Hhhccc-CCCCCccCCCCCCcCCCHHHHHHHHh
Confidence            5789999999999998888877321                      122222 44556999999999999999999998


Q ss_pred             cccccCCCCccccccccchhccChhhHHHHHhhhcC
Q psy15165        522 GIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       522 ~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                       .|     ..+|.|..|++.|.....|.+|+...++
T Consensus        95 -~h-----~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         95 -YT-----EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             -cC-----CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence             33     3579999999999999999999987665

>KOG3993|consensus

Probab=98.69  E-value=4.5e-09  Score=102.08  Aligned_cols=114  Identities=18%  Similarity=0.242  Sum_probs=63.9

Q ss_pred             ceecccCccccCCHHHHHHHHhccccccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcchhccCChhHHhcc
Q psy15165        337 YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNH  416 (606)
Q Consensus       337 ~~~C~~C~~~f~~~~~l~~H~~~~h~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H  416 (606)
                      .|.|.+|...|.....|.+|.-    .....--|+|+.|+|.|+-..+|-.|.|.|....--.     ++-.....    
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC----~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa-----~a~~~P~k----  333 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRC----PRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAA-----KAGSPPPK----  333 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccC----CeeEEeeecCCcccccccCchhhhhhhcccCCchhhh-----hcCCCChh----
Confidence            4777777777777777777754    1111224777777777777777777777775321100     00000000    


Q ss_pred             cccCCCCCCChHHHHHHHHH-hcCCCCCcccCCCCCCccCCHHHHHHHHHHhcC
Q psy15165        417 KNSSCPKLYSYETYLKHLKT-NHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQ  469 (606)
Q Consensus       417 ~~~~C~~~f~~~~~l~~h~~-~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  469 (606)
                            +........+.-.+ -....+..|.|.+|++.|+....|+.|+.+|+.
T Consensus       334 ------~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  334 ------QAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             ------hhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence                  00000000000000 001224579999999999999999999988864

>KOG3993|consensus

Probab=98.68  E-value=5.2e-09  Score=101.67  Aligned_cols=84  Identities=25%  Similarity=0.312  Sum_probs=57.6

Q ss_pred             cceecccCccccCCHHHHHHHHhccccccCCC------------------------------------------Cccccc
Q psy15165        336 QYHVCPHCGKKFTRKAELQLHIKGIHLKHQLE------------------------------------------KTYICE  373 (606)
Q Consensus       336 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~h~~~------------------------------------------~~~~C~  373 (606)
                      ..|.|.+|++.|.....|+.|+.++|..-...                                          ....|+
T Consensus       355 gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~pp  434 (500)
T KOG3993|consen  355 GIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELPP  434 (500)
T ss_pred             ceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCCC
Confidence            46999999999999999999976544211100                                          013466


Q ss_pred             ccccccCchHHHHhhhhhcCCCCccccCcchhccCChhHHhccccc
Q psy15165        374 YCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNS  419 (606)
Q Consensus       374 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~  419 (606)
                      +||..+.++..--.+.+.-..+.-|.|.+|..+|.+..+|.+|+..
T Consensus       435 ~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  435 YDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINK  480 (500)
T ss_pred             CCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhh
Confidence            6666666555544454444456678899999999999999988753

>PHA02768 hypothetical protein; Provisional

Probab=98.67  E-value=7.5e-09  Score=71.58  Aligned_cols=45  Identities=18%  Similarity=0.319  Sum_probs=36.2

Q ss_pred             cccccccccccCchHHHHhhhhhcCCCCccccCcchhccCChhHHhc
Q psy15165        369 TYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKN  415 (606)
Q Consensus       369 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~  415 (606)
                      .|.|+.||+.|...+.|..|+++|+  ++|+|..|++.|...+.|..
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~~   49 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYIE   49 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeEE
Confidence            4788888888888888888888887  68888888888887766643

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.56  E-value=3.2e-08  Score=58.41  Aligned_cols=25  Identities=68%  Similarity=1.234  Sum_probs=19.8

Q ss_pred             hHHHHHhhhcCCCCcccc-cCccCCc
Q psy15165        547 YLKRHMRTHTNEKPYKCV-CGLGFNF  571 (606)
Q Consensus       547 ~L~~H~~~H~~~kp~~C~-C~~~F~~  571 (606)
                      +|.+||++|+|++||.|. |+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            477888888888888887 8888863

...

>PHA00616 hypothetical protein

Probab=98.41  E-value=1.4e-07  Score=61.94  Aligned_cols=33  Identities=12%  Similarity=0.239  Sum_probs=27.2

Q ss_pred             cccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      ||+|+.||+.|..++.|..|++.|+|++|+.|.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            578888888888888888888888888888774

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.40  E-value=1.3e-07  Score=55.79  Aligned_cols=26  Identities=65%  Similarity=1.246  Sum_probs=21.3

Q ss_pred             HHHhhhhhcCCCCccccCcchhccCC
Q psy15165        384 YLRRHMRVHTNEKPYKCKDCGAAFNH  409 (606)
Q Consensus       384 ~L~~H~~~H~~~~~~~C~~C~~~f~~  409 (606)
                      +|.+|+++|+|++||.|+.|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47888888888888888888888863

...

>PHA00616 hypothetical protein

Probab=98.25  E-value=2.8e-07  Score=60.52  Aligned_cols=32  Identities=19%  Similarity=0.216  Sum_probs=30.5

Q ss_pred             Ccccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        560 PYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       560 p~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      ||.|. ||+.|...+.|.+|+++||+++|+.|.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            79998 999999999999999999999999875

>PHA00732 hypothetical protein

Probab=98.13  E-value=1.5e-06  Score=66.70  Aligned_cols=48  Identities=27%  Similarity=0.538  Sum_probs=34.4

Q ss_pred             ccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcC
Q psy15165        501 LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      |.|+.||+.|.+...|..|++..|   .   ++.|+.||++|.   .|..|++++..
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H---~---~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNH---T---LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhccc---C---CCccCCCCCEeC---ChhhhhcccCC
Confidence            678888888888888888876334   2   357888888887   47777765543

>PHA00732 hypothetical protein

Probab=98.09  E-value=2.5e-06  Score=65.43  Aligned_cols=47  Identities=32%  Similarity=0.489  Sum_probs=40.7

Q ss_pred             cccccccchhccChhhHHHHHhh-hcCCCCcccc-cCccCCchhhHHHhhhcccc
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHMRT-HTNEKPYKCV-CGLGFNFNVSLKNHKQKCSV  584 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~~~-H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~  584 (606)
                      ||.|+.||+.|.+...|..|++. |+   ++.|. |+++|.   .|..|+++...
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccCC
Confidence            68999999999999999999985 65   46898 999997   58899987653

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.03  E-value=6.8e-06  Score=58.49  Aligned_cols=51  Identities=27%  Similarity=0.546  Sum_probs=38.2

Q ss_pred             ccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhc
Q psy15165        501 LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                      |.||+|++ ..+...|..|+...|.  ...+.+.|++|...+.  .+|..|+..++
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~--~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHR--SESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCc--CCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            78999999 4556789999887773  2345688999988655  48888887765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF01352 KRAB: KRAB box; InterPro: IPR001909 The Krueppel-associated box (KRAB) is a domain of around 75 amino acids that is found in the N-terminal part of about one third of eukaryotic Krueppel-type C2H2 zinc finger proteins (ZFPs) []

Probab=98.00  E-value=9.3e-07  Score=58.07  Aligned_cols=22  Identities=27%  Similarity=0.431  Sum_probs=14.5

Q ss_pred             ccccccccc---------ccccCCCceeeec
Q psy15165          2 YDDDWNNLD---------DHVGKPSRRRSLG   23 (606)
Q Consensus         2 ~~~~~~~~~---------~~~~~~~~~~~~g   23 (606)
                      +.|||..||         ||+|||+||+|||
T Consensus        11 s~eEW~~L~~~Qk~ly~dvm~Eny~~l~slG   41 (41)
T PF01352_consen   11 SQEEWELLDPAQKNLYRDVMLENYRNLVSLG   41 (41)
T ss_dssp             -HHHHHTS-HHHHHHHHHHHHHTTTS---S-
T ss_pred             ChhhcccccceecccchhHHHHhhcccEecC
Confidence            368999885         8899999999998

It is enriched in charged amino acids and can be divided into subregions A and B, which are predicted to fold into two amphipathic alpha-helices. The KRAB A and B boxes can be separated by variable spacer segments and many KRAB proteins contain only the A box []. The functions currently known for members of the KRAB-containing protein family include transcriptional repression of RNA polymerase I, II, and III promoters, binding and splicing of RNA, and control of nucleolus function. The KRAB domain functions as a transcriptional repressor when tethered to the template DNA by a DNA-binding domain. A sequence of 45 amino acids in the KRAB A subdomain has been shown to be necessary and sufficient for transcriptional repression. The B box does not repress by itself but does potentiate the repression exerted by the KRAB A subdomain [, ]. Gene silencing requires the binding of the KRAB domain to the RING-B box-coiled coil (RBCC) domain of the KAP-1/TIF1-beta corepressor. As KAP-1 binds to the heterochromatin proteins HP1, it has been proposed that the KRAB-ZFP-bound target gene could be silenced following recruitment to heterochromatin [, ]. KRAB-ZFPs probably constitute the single largest class of transcription factors within the human genome []. Although the function of KRAB-ZFPs is largely unknown, they appear to play important roles during cell differentiation and development. The KRAB domain is generally encoded by two exons. The regions coded by the two exons are known as KRAB-A and KRAB-B.; GO: 0003676 nucleic acid binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1V65_A.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.99  E-value=9.6e-06  Score=57.70  Aligned_cols=51  Identities=24%  Similarity=0.452  Sum_probs=33.7

Q ss_pred             ccccccccccCCHHHHHHhHhhhcCCCCCCcccCccccccCCHHHHHHHHHHhh
Q psy15165        249 FKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEH  302 (606)
Q Consensus       249 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  302 (606)
                      |.|++|++ ..+...|..|....|....+.+.|++|...+.  ..|..|+..+|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            67777777 44566777777766765445677777776544  36777776665

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.74  E-value=1.5e-05  Score=45.58  Aligned_cols=23  Identities=48%  Similarity=0.928  Sum_probs=14.3

Q ss_pred             ccccccchhccChhhHHHHHhhh
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRTH  555 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~H  555 (606)
                      |.|+.|++.|.+...|..|+++|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            45666666666666666666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.38  E-value=7.6e-05  Score=61.19  Aligned_cols=72  Identities=22%  Similarity=0.382  Sum_probs=18.9

Q ss_pred             cCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhh
Q psy15165        502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQ  580 (606)
Q Consensus       502 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~  580 (606)
                      +|..|+..|.+...|..|+...|.....        ....+.....|..+++.-. ..++.|. |++.|.+...|..||+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~--------~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP--------DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMR   71 (100)
T ss_dssp             ---------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHH
T ss_pred             Cccccccccccccccccccccccccccc--------ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHc
Confidence            5899999999999999999877732211        1222234445555544322 2268887 9988888888999988


Q ss_pred             cc
Q psy15165        581 KC  582 (606)
Q Consensus       581 ~h  582 (606)
                      .+
T Consensus        72 ~~   73 (100)
T PF12756_consen   72 SK   73 (100)
T ss_dssp             HT
T ss_pred             Cc
Confidence            64

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.33  E-value=0.00011  Score=41.94  Aligned_cols=21  Identities=43%  Similarity=0.781  Sum_probs=9.9

Q ss_pred             cccccccccCchHHHHhhhhh
Q psy15165        371 ICEYCHKEFTFYNYLRRHMRV  391 (606)
Q Consensus       371 ~C~~C~k~f~~~~~L~~H~~~  391 (606)
                      .|+.|++.|.+...|..|++.
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    2 KCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHhH
Confidence            444444444444444444443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.32  E-value=0.00014  Score=41.99  Aligned_cols=23  Identities=48%  Similarity=0.901  Sum_probs=12.5

Q ss_pred             ccccccchhccChhhHHHHHhhh
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRTH  555 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~H  555 (606)
                      |.|++|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45666666666666666666554

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.19  E-value=0.00018  Score=42.97  Aligned_cols=24  Identities=42%  Similarity=0.870  Sum_probs=13.1

Q ss_pred             ccccccchhccChhhHHHHHhhhc
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                      |.|..|++.|.+...|..|++.|.
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhc
Confidence            455555555555555555555543

>KOG2231|consensus

Probab=97.02  E-value=0.0012  Score=70.49  Aligned_cols=80  Identities=23%  Similarity=0.457  Sum_probs=56.1

Q ss_pred             ccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccc------hhccChhhHHHHHhhhcCCCCcccc---cCc----
Q psy15165        501 LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCN------KEFTFLQYLKRHMRTHTNEKPYKCV---CGL----  567 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~------k~f~~~~~L~~H~~~H~~~kp~~C~---C~~----  567 (606)
                      -.|..|...|-....|.+|++..|        |.|.+|.      -.|.....|..|.|.++    |.|.   |.-    
T Consensus       183 p~C~~C~~~fld~~el~rH~~~~h--------~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~~~~f~  250 (669)
T KOG2231|consen  183 PLCKFCHERFLDDDELYRHLRFDH--------EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCRTKKFY  250 (669)
T ss_pred             ccchhhhhhhccHHHHHHhhccce--------eheeecCcccccchhcccchHHHHHhhhcC----ccccccccccceee
Confidence            479999999999999999998666        7788874      56778888999888766    5562   432    


Q ss_pred             -cCCchhhHHHhhhccccccchhhcc
Q psy15165        568 -GFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       568 -~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                       .|.....|+.|.+.+..++-|.|..
T Consensus       251 ~~~~~ei~lk~~~~~~~~e~~~~~~~  276 (669)
T KOG2231|consen  251 VAFELEIELKAHNRFIQHEKCYICRP  276 (669)
T ss_pred             ehhHHHHHHHhhccccchheeccCCc
Confidence             2233445555555555567777753

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.01  E-value=0.0002  Score=67.71  Aligned_cols=55  Identities=31%  Similarity=0.601  Sum_probs=32.1

Q ss_pred             CccccCCC--CCCcCCChHHHHHhhhccccc---C------------CCCccccccccchhccChhhHHHHH
Q psy15165        498 GFFLQCPH--CPKTFPRKTELSNHIKGIHMK---H------------ELRQTFVCEYCNKEFTFLQYLKRHM  552 (606)
Q Consensus       498 ~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~---~------------~~~k~y~C~~C~k~f~~~~~L~~H~  552 (606)
                      +++|+|++  |.|+|++...|+.|+..-|..   |            ...|||+|++|+|++.....|+.|.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            45577765  777777777777777532300   0            0125566666666666666555553

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.00  E-value=0.00048  Score=39.63  Aligned_cols=22  Identities=32%  Similarity=0.673  Sum_probs=10.0

Q ss_pred             ccCccccccCCHHHHHHHHHHh
Q psy15165        280 LCYHCGYYSKNRSTLKNHVRVE  301 (606)
Q Consensus       280 ~C~~C~~~f~~~~~L~~H~~~h  301 (606)
                      .|+.|++.|.+...|+.|+..+
T Consensus         2 ~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    2 QCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             E-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCcCCCCcCCcHHHHHHHHHhh
Confidence            4555555555555555555444

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.00  E-value=0.00042  Score=56.74  Aligned_cols=74  Identities=28%  Similarity=0.418  Sum_probs=22.4

Q ss_pred             ccccCccccCCHHHHHhhhhccccccCCCCCCcccccccccccCCHHHHHHhHhhhcCCCCCCcccCccccccCCHHHHH
Q psy15165        216 KCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLK  295 (606)
Q Consensus       216 ~C~~C~~~f~~~~~l~~H~~~~~~h~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~  295 (606)
                      +|..|+..|.+...|..||..  .|.-.       -. ....+.....+..+++..-   ...+.|..|++.|.+...|.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~--~H~~~-------~~-~~~~l~~~~~~~~~~~~~~---~~~~~C~~C~~~f~s~~~l~   67 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKK--KHGFD-------IP-DQKYLVDPNRLLNYLRKKV---KESFRCPYCNKTFRSREALQ   67 (100)
T ss_dssp             -------------------------------------------------------------SSEEBSSSS-EESSHHHHH
T ss_pred             Ccccccccccccccccccccc--ccccc-------cc-ccccccccccccccccccc---CCCCCCCccCCCCcCHHHHH
Confidence            599999999999999999963  33211       11 1223335555555554221   34689999999999999999


Q ss_pred             HHHHHhh
Q psy15165        296 NHVRVEH  302 (606)
Q Consensus       296 ~H~~~h~  302 (606)
                      .|++.++
T Consensus        68 ~Hm~~~~   74 (100)
T PF12756_consen   68 EHMRSKH   74 (100)
T ss_dssp             HHHHHTT
T ss_pred             HHHcCcc
Confidence            9999764

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.94  E-value=0.00028  Score=66.71  Aligned_cols=52  Identities=33%  Similarity=0.660  Sum_probs=45.4

Q ss_pred             CCccccccc--cchhccChhhHHHHHhh-hc------------------CCCCcccc-cCccCCchhhHHHhhh
Q psy15165        529 LRQTFVCEY--CNKEFTFLQYLKRHMRT-HT------------------NEKPYKCV-CGLGFNFNVSLKNHKQ  580 (606)
Q Consensus       529 ~~k~y~C~~--C~k~f~~~~~L~~H~~~-H~------------------~~kp~~C~-C~~~F~~~~~L~~H~~  580 (606)
                      ++|||+|++  |.|+++....|+.|+.- |.                  ..|||+|. |++.+.....|+.|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            459999998  99999999999999862 41                  24899998 9999999999999975

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.91  E-value=0.00049  Score=41.02  Aligned_cols=25  Identities=32%  Similarity=0.744  Sum_probs=23.2

Q ss_pred             Ccccc-cCccCCchhhHHHhhhcccc
Q psy15165        560 PYKCV-CGLGFNFNVSLKNHKQKCSV  584 (606)
Q Consensus       560 p~~C~-C~~~F~~~~~L~~H~~~h~~  584 (606)
                      ||.|. |++.|.+...|..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68998 99999999999999999864

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.88  E-value=0.00076  Score=45.38  Aligned_cols=33  Identities=24%  Similarity=0.464  Sum_probs=21.7

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCC
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP  560 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp  560 (606)
                      ..+.|-.|++|+..+.+..+|++|+.++++.+|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            566778888888888888888888887777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2231|consensus

Probab=96.71  E-value=0.0028  Score=67.76  Aligned_cols=81  Identities=26%  Similarity=0.447  Sum_probs=44.0

Q ss_pred             cccccCcccc---------------CCHHHHHhhhhccccccCCCCCCcccccccc---------cccCCHHHHHHhHhh
Q psy15165        215 FKCRVCDWKL---------------NSYDKLLRHMDWDEVHLGQFSPYEFKCRVCD---------WKLNSYDKLLRHIKS  270 (606)
Q Consensus       215 ~~C~~C~~~f---------------~~~~~l~~H~~~~~~h~~~~~~~~~~C~~C~---------~~f~~~~~L~~H~~~  270 (606)
                      +.|.+|++.|               .+...|..|+..  .|.    -  +.|.+|-         ...-+...|..|+..
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~--~H~----~--~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~  171 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRD--QHK----L--HLCSLCLQNLKIFINERKLYTRAELNLHLMF  171 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHH--hhh----h--hccccccccceeeeeeeehehHHHHHHHHhc
Confidence            4566666655               367777777741  221    1  4455542         222355666666653


Q ss_pred             hcCCC---CCCcccCccccccCCHHHHHHHHHHhhC
Q psy15165        271 DHGGY---ETSSLCYHCGYYSKNRSTLKNHVRVEHG  303 (606)
Q Consensus       271 ~H~~~---~~~~~C~~C~~~f~~~~~L~~H~~~h~~  303 (606)
                      --...   ..--.|..|...|-....|.+|++.+|-
T Consensus       172 gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h~  207 (669)
T KOG2231|consen  172 GDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDHE  207 (669)
T ss_pred             CCCccccccCCccchhhhhhhccHHHHHHhhcccee
Confidence            21110   0113477777777777777777776553

>smart00355 ZnF_C2H2 zinc finger

Probab=96.64  E-value=0.0015  Score=38.17  Aligned_cols=23  Identities=48%  Similarity=0.810  Sum_probs=12.4

Q ss_pred             ccccccchhccChhhHHHHHhhh
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRTH  555 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~H  555 (606)
                      |.|+.|+++|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            34555555555555555555544

>KOG1146|consensus

Probab=96.58  E-value=0.0005  Score=77.39  Aligned_cols=84  Identities=20%  Similarity=0.320  Sum_probs=59.7

Q ss_pred             CcceecccCccccCCHHHHHHHHhcc-cc-----------------cc---------------------CCCCccccccc
Q psy15165        335 GQYHVCPHCGKKFTRKAELQLHIKGI-HL-----------------KH---------------------QLEKTYICEYC  375 (606)
Q Consensus       335 ~~~~~C~~C~~~f~~~~~l~~H~~~~-h~-----------------~h---------------------~~~~~~~C~~C  375 (606)
                      +.+|.|..|...+.++.+|.+|+... |.                 .+                     ...-.+.|.+|
T Consensus       516 ~~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc  595 (1406)
T KOG1146|consen  516 GKPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVC  595 (1406)
T ss_pred             CCcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhh
Confidence            47899999999999999999998631 10                 00                     00123889999


Q ss_pred             ccccCchHHHHhhhhh-cCCCCccccCcchhccCChhHHhcccc
Q psy15165        376 HKEFTFYNYLRRHMRV-HTNEKPYKCKDCGAAFNHNVSLKNHKN  418 (606)
Q Consensus       376 ~k~f~~~~~L~~H~~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~  418 (606)
                      ++..+-..+|+.||.. ++..-|..|-.|.-.+.....+..+.+
T Consensus       596 ~yetniarnlrihmtss~~s~~p~~~Lq~~it~~l~~~~~~~~~  639 (1406)
T KOG1146|consen  596 SYETNIARNLRIHMTASPSSSPPSLVLQQNITSSLASLLGGQGR  639 (1406)
T ss_pred             cchhhhhhccccccccCCCCCChHHHhhhcchhhccccccCcCC
Confidence            9999989999999873 333444777777777777766666655

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.26  E-value=0.0025  Score=36.67  Aligned_cols=23  Identities=30%  Similarity=0.690  Sum_probs=12.5

Q ss_pred             ccccccchhccChhhHHHHHhhhc
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                      |+|+.|++... ...|.+|+++|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666666665 666666666543

>PRK04860 hypothetical protein; Provisional

Probab=96.25  E-value=0.0019  Score=57.08  Aligned_cols=38  Identities=29%  Similarity=0.701  Sum_probs=28.9

Q ss_pred             cccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchh
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNV  573 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~  573 (606)
                      +|.|. |+.   ....+++|.++|+|+++|.|. |+..|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            57887 876   677778888888888888886 888776543

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.01  E-value=0.011  Score=56.90  Aligned_cols=83  Identities=25%  Similarity=0.506  Sum_probs=57.1

Q ss_pred             Cccccc--CccccCCHHHHHhhhhccccccCCCCCCcccccccc---ccc------CCHHHHHHhHhhhcC--CCCCCcc
Q psy15165        214 EFKCRV--CDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCD---WKL------NSYDKLLRHIKSDHG--GYETSSL  280 (606)
Q Consensus       214 ~~~C~~--C~~~f~~~~~l~~H~~~~~~h~~~~~~~~~~C~~C~---~~f------~~~~~L~~H~~~~H~--~~~~~~~  280 (606)
                      .|.|+.  |.........|..|.+.   ..+.     +.|.+|-   +.|      -+...|+.|...--.  ++..--.
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~---~H~~-----~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~  222 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKA---QHGF-----VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPL  222 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHh---hcCc-----EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCch
Confidence            478865  77777778899999873   2222     6788873   233      356677788652111  1122335


Q ss_pred             cCccccccCCHHHHHHHHHHhhCC
Q psy15165        281 CYHCGYYSKNRSTLKNHVRVEHGE  304 (606)
Q Consensus       281 C~~C~~~f~~~~~L~~H~~~h~~~  304 (606)
                      |..|...|-+-..|..|++..|..
T Consensus       223 C~FC~~~FYdDDEL~~HcR~~HE~  246 (493)
T COG5236         223 CIFCKIYFYDDDELRRHCRLRHEA  246 (493)
T ss_pred             hhhccceecChHHHHHHHHhhhhh
Confidence            999999999999999999988763

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.87  E-value=0.0043  Score=36.08  Aligned_cols=22  Identities=41%  Similarity=0.954  Sum_probs=13.6

Q ss_pred             ccccccchhccChhhHHHHHhh
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRT  554 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~  554 (606)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.78  E-value=0.0082  Score=40.54  Aligned_cols=33  Identities=30%  Similarity=0.518  Sum_probs=17.4

Q ss_pred             CCCCcccccccccccCchHHHHhhhhhcCCCCc
Q psy15165        365 QLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKP  397 (606)
Q Consensus       365 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~  397 (606)
                      ..+.|-.|++|+..+....+|++|+..+++.+|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            345566677777777777777777766655544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=95.55  E-value=0.015  Score=33.75  Aligned_cols=24  Identities=29%  Similarity=0.531  Sum_probs=21.8

Q ss_pred             ccCCCCCCccCCHHHHHHHHHHhc
Q psy15165        445 NLCYICGFFSAKRSTLAHHIQDHI  468 (606)
Q Consensus       445 ~~C~~C~~~f~~~~~L~~H~~~h~  468 (606)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999999774

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.54  E-value=0.011  Score=34.01  Aligned_cols=23  Identities=39%  Similarity=0.834  Sum_probs=11.6

Q ss_pred             cccCccccccCCHHHHHHHHHHhh
Q psy15165        279 SLCYHCGYYSKNRSTLKNHVRVEH  302 (606)
Q Consensus       279 ~~C~~C~~~f~~~~~L~~H~~~h~  302 (606)
                      |+|+.|++... ...|..|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            34555555555 555555555554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.34  E-value=0.01  Score=34.49  Aligned_cols=20  Identities=45%  Similarity=0.957  Sum_probs=10.5

Q ss_pred             cccccccccCchHHHHhhhh
Q psy15165        371 ICEYCHKEFTFYNYLRRHMR  390 (606)
Q Consensus       371 ~C~~C~k~f~~~~~L~~H~~  390 (606)
                      .|.+|++.|.+...|+.|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            45555555555555555544

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.15  E-value=0.036  Score=53.43  Aligned_cols=123  Identities=22%  Similarity=0.391  Sum_probs=82.7

Q ss_pred             ccCCC--CCCccCCHHHHHHHHHHhcCCCCCcCccccccc------------cchhhhhcccccccCC--cc--ccCCCC
Q psy15165        445 NLCYI--CGFFSAKRSTLAHHIQDHIQPRMKQKQICEICC------------AEVYHINGHIKDKHSG--FF--LQCPHC  506 (606)
Q Consensus       445 ~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~------------~~~~~l~~H~~~~h~~--~~--~~C~~C  506 (606)
                      |.|+.  |......-..|..|.+..++-     ..|.+|-            ...+.|..|...-..+  .+  -.|..|
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~-----~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC  226 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF-----VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFC  226 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc-----EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhc
Confidence            44543  445555566777787765543     5677775            2334566665442222  22  469999


Q ss_pred             CCcCCChHHHHHhhhcccccCCCCccccccccch-------hccChhhHHHHHhhhcCCCCccc--c-cC----ccCCch
Q psy15165        507 PKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNK-------EFTFLQYLKRHMRTHTNEKPYKC--V-CG----LGFNFN  572 (606)
Q Consensus       507 ~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k-------~f~~~~~L~~H~~~H~~~kp~~C--~-C~----~~F~~~  572 (606)
                      ...|.+-..|.+|+|..|     +   +|.+|++       .|.....|.+|.+.-    -|.|  . |.    +.|...
T Consensus       227 ~~~FYdDDEL~~HcR~~H-----E---~ChICD~v~p~~~QYFK~Y~~Le~HF~~~----hy~ct~qtc~~~k~~vf~~~  294 (493)
T COG5236         227 KIYFYDDDELRRHCRLRH-----E---ACHICDMVGPIRYQYFKSYEDLEAHFRNA----HYCCTFQTCRVGKCYVFPYH  294 (493)
T ss_pred             cceecChHHHHHHHHhhh-----h---hhhhhhccCccchhhhhCHHHHHHHhhcC----ceEEEEEEEecCcEEEeccH
Confidence            999999999999999766     2   4666654       478888888887632    3777  2 64    469999


Q ss_pred             hhHHHhhhcccc
Q psy15165        573 VSLKNHKQKCSV  584 (606)
Q Consensus       573 ~~L~~H~~~h~~  584 (606)
                      ..|..|+-.-|+
T Consensus       295 ~el~~h~~~~h~  306 (493)
T COG5236         295 TELLEHLTRFHK  306 (493)
T ss_pred             HHHHHHHHHHhh
Confidence            999999866553

>KOG2482|consensus

Probab=95.00  E-value=0.08  Score=51.15  Aligned_cols=147  Identities=23%  Similarity=0.345  Sum_probs=86.4

Q ss_pred             HHHHHhHhhhcCCCCCCcccCcccccc-CCHHHHHHHHHHhhCCccccccccccccccccchHhHHHHHHhccCCcceec
Q psy15165        262 DKLLRHIKSDHGGYETSSLCYHCGYYS-KNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQYHVC  340 (606)
Q Consensus       262 ~~L~~H~~~~H~~~~~~~~C~~C~~~f-~~~~~L~~H~~~h~~~~~~~~~~~~~C~~C~~~~~~l~~h~~~~~~~~~~~C  340 (606)
                      ..|.+|++.- .+.....+|-.|...+ .+++....|+-..|+-....+.+...|       ..|..|.+..  -..+.|
T Consensus       129 eaLeqqQ~Er-edt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyv-------nelLehLkek--L~r~~C  198 (423)
T KOG2482|consen  129 EALEQQQKER-EDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYV-------NELLEHLKEK--LERLRC  198 (423)
T ss_pred             HHHHHHHHHh-cCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeH-------HHHHHHHHHH--Hhhhee
Confidence            3555565533 2223445677776544 345556667666565433222121111       1233333210  024788


Q ss_pred             ccCccccCCHHHHHHHHhccccccCC--------------------------------------------------CCc-
Q psy15165        341 PHCGKKFTRKAELQLHIKGIHLKHQL--------------------------------------------------EKT-  369 (606)
Q Consensus       341 ~~C~~~f~~~~~l~~H~~~~h~~h~~--------------------------------------------------~~~-  369 (606)
                      -+|.+.|..+..|+.||+........                                                  ..+ 
T Consensus       199 LyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~  278 (423)
T KOG2482|consen  199 LYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEAL  278 (423)
T ss_pred             eeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCcc
Confidence            89999999999999998743100000                                                  011 


Q ss_pred             -ccccccccccCchHHHHhhhhh-cCC--------------------------CCccccCcchhccCChhHHhcccc
Q psy15165        370 -YICEYCHKEFTFYNYLRRHMRV-HTN--------------------------EKPYKCKDCGAAFNHNVSLKNHKN  418 (606)
Q Consensus       370 -~~C~~C~k~f~~~~~L~~H~~~-H~~--------------------------~~~~~C~~C~~~f~~~~~L~~H~~  418 (606)
                       ..|-.|....-+...|..||.. |.=                          ...-.|-.|.-.|.....|..||-
T Consensus       279 ~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  279 SVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             ceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcc
Confidence             5899999988889999999874 420                          011358888889999999999976

>PRK04860 hypothetical protein; Provisional

Probab=94.95  E-value=0.0099  Score=52.57  Aligned_cols=38  Identities=34%  Similarity=0.804  Sum_probs=29.2

Q ss_pred             cccccccccccCchHHHHhhhhhcCCCCccccCcchhccCCh
Q psy15165        369 TYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHN  410 (606)
Q Consensus       369 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~  410 (606)
                      +|.|. |+.   ....+++|.++|+++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            57887 876   556678888888888888888888877643

>KOG2785|consensus

Probab=94.69  E-value=0.05  Score=53.72  Aligned_cols=50  Identities=20%  Similarity=0.392  Sum_probs=41.8

Q ss_pred             cccccccchhccChhhHHHHHhhhcCC-----------------------CCcccc-cC---ccCCchhhHHHhhhc
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHMRTHTNE-----------------------KPYKCV-CG---LGFNFNVSLKNHKQK  581 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~~~H~~~-----------------------kp~~C~-C~---~~F~~~~~L~~H~~~  581 (606)
                      |-.|-+|++.|.+-..-..||..++|-                       .-|.|. |+   +.|.+....+.||+.
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            467888999999988889999887762                       237898 99   999999999999974

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.46  E-value=0.025  Score=33.50  Aligned_cols=21  Identities=38%  Similarity=0.748  Sum_probs=16.3

Q ss_pred             cccccCccccCCHHHHHhhhh
Q psy15165        215 FKCRVCDWKLNSYDKLLRHMD  235 (606)
Q Consensus       215 ~~C~~C~~~f~~~~~l~~H~~  235 (606)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            567888888888888877775

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.43  E-value=0.023  Score=33.70  Aligned_cols=21  Identities=38%  Similarity=0.874  Sum_probs=11.8

Q ss_pred             ccccccccccCchHHHHhhhh
Q psy15165        370 YICEYCHKEFTFYNYLRRHMR  390 (606)
Q Consensus       370 ~~C~~C~k~f~~~~~L~~H~~  390 (606)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            445555555555555555554

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2785|consensus

Probab=94.21  E-value=0.08  Score=52.30  Aligned_cols=55  Identities=27%  Similarity=0.447  Sum_probs=36.8

Q ss_pred             cceecccCccccCCHHHHHHHHhccccccCCCC-------------------cccccccc---cccCchHHHHhhhh
Q psy15165        336 QYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEK-------------------TYICEYCH---KEFTFYNYLRRHMR  390 (606)
Q Consensus       336 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~h~~~~-------------------~~~C~~C~---k~f~~~~~L~~H~~  390 (606)
                      .|-.|-.|++.|.+...-..||...|..-..++                   .|.|-.|+   +.|.+..+.+.||.
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~  241 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMR  241 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHh
Confidence            346788888888888888888876654332221                   25666666   66777777777765

>KOG1146|consensus

Probab=94.06  E-value=0.021  Score=64.87  Aligned_cols=79  Identities=28%  Similarity=0.463  Sum_probs=59.0

Q ss_pred             ccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhh-hc-----------------------
Q psy15165        501 LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRT-HT-----------------------  556 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~-H~-----------------------  556 (606)
                      -.|.-|+..+.+...+.-|+...|   .-.+.|+|+.|+..|+....|..|||. |.                       
T Consensus       437 ~e~~~~e~~~~s~r~~~~~t~~L~---S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~  513 (1406)
T KOG1146|consen  437 VELTKAEPLLESKRSLEGQTVVLH---SFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYR  513 (1406)
T ss_pred             ccccchhhhhhhhcccccceeeee---cccccccCCccchhhhhHHHhhhcccccccccchhHhHhcccccccccccccc
Confidence            346666677777777777766545   445777888888888888888888776 21                       


Q ss_pred             -CCCCcccc-cCccCCchhhHHHhhhcc
Q psy15165        557 -NEKPYKCV-CGLGFNFNVSLKNHKQKC  582 (606)
Q Consensus       557 -~~kp~~C~-C~~~F~~~~~L~~H~~~h  582 (606)
                       +.+||.|. |.++|+.+.+|..|++..
T Consensus       514 ~~~~p~~C~~C~~stttng~LsihlqS~  541 (1406)
T KOG1146|consen  514 CPGKPYPCRACNYSTTTNGNLSIHLQSD  541 (1406)
T ss_pred             CCCCcccceeeeeeeecchHHHHHHHHH
Confidence             34689998 999999999999999865

>smart00349 KRAB krueppel associated box

Probab=93.80  E-value=0.019  Score=39.63  Aligned_cols=34  Identities=26%  Similarity=0.371  Sum_probs=31.2

Q ss_pred             cccccCCCceeeecccCCCCceeeeeccccCCcc
Q psy15165         10 DDHVGKPSRRRSLGVESSVPKLKIKTETDDKSWE   43 (606)
Q Consensus        10 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   43 (606)
                      +.++++|.++..+|..+..|+++..+++++.||+
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   61 (61)
T smart00349       28 DVMLENYSNLVSLGFQVPKPDLISQLEQGEEPWI   61 (61)
T ss_pred             HHHHHhhccccccCCCcCCcchhhhhhccCcCCC
Confidence            4678999999999999999999999999999995

>KOG2482|consensus

Probab=93.71  E-value=0.17  Score=49.07  Aligned_cols=145  Identities=23%  Similarity=0.359  Sum_probs=94.4

Q ss_pred             HHHHHHHHhcCCCCCcccCCCCCCcc-CCHHHHHHHHHHhcCC---CCCcCccccccccchhhhhcccccccCCccccCC
Q psy15165        429 TYLKHLKTNHHGYEVSNLCYICGFFS-AKRSTLAHHIQDHIQP---RMKQKQICEICCAEVYHINGHIKDKHSGFFLQCP  504 (606)
Q Consensus       429 ~~l~~h~~~~~~~~~~~~C~~C~~~f-~~~~~L~~H~~~h~~~---~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~  504 (606)
                      ..|..++....+......|-.|...+ ..++....|+-.-++-   .|..-       .....|-.|+...  -..+.|-
T Consensus       129 eaLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDni-------VyvnelLehLkek--L~r~~CL  199 (423)
T KOG2482|consen  129 EALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNI-------VYVNELLEHLKEK--LERLRCL  199 (423)
T ss_pred             HHHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcce-------eeHHHHHHHHHHH--Hhhheee
Confidence            34555555555556677899998755 4677788887554332   11000       1223344444321  1128899


Q ss_pred             CCCCcCCChHHHHHhhhcc-ccc----------------------------C---------------------CCCcc--
Q psy15165        505 HCPKTFPRKTELSNHIKGI-HMK----------------------------H---------------------ELRQT--  532 (606)
Q Consensus       505 ~C~~~f~~~~~L~~H~~~~-H~~----------------------------~---------------------~~~k~--  532 (606)
                      +|.+.|..+..|+.||+.. |..                            +                     .+..+  
T Consensus       200 yCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~  279 (423)
T KOG2482|consen  200 YCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALS  279 (423)
T ss_pred             eeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccc
Confidence            9999999999999999842 200                            0                     00111  


Q ss_pred             ccccccchhccChhhHHHHHhhhcC---------------------------CCCcccc-cCccCCchhhHHHhhhcc
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRTHTN---------------------------EKPYKCV-CGLGFNFNVSLKNHKQKC  582 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~H~~---------------------------~kp~~C~-C~~~F~~~~~L~~H~~~h  582 (606)
                      -.|-.|....-+...|..||.+-+.                           .+.-.|. |...|-....|..||.-+
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            4899999999999999999985331                           0123566 999999999999999743

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.48  E-value=0.029  Score=59.52  Aligned_cols=70  Identities=30%  Similarity=0.429  Sum_probs=47.1

Q ss_pred             CCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccccCccCCchhhHHH
Q psy15165        506 CPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCGLGFNFNVSLKN  577 (606)
Q Consensus       506 C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~C~~~F~~~~~L~~  577 (606)
                      |-..+.....+..|.. .|.. .....+.+..|.+.|.....|..|++.|....++.|.+-+.|.....+..
T Consensus       394 ~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  463 (467)
T COG5048         394 CIRNFKRDSNLSLHII-THLS-FRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLDLSN  463 (467)
T ss_pred             hhhhhccccccccccc-cccc-cCCcCCCCCcchhhccCcccccccccccccCCceeeccccccchhhhhhc
Confidence            6666666666666655 3411 22335778889999999999999999998888888874444544444433

>KOG2893|consensus

Probab=93.47  E-value=0.024  Score=51.59  Aligned_cols=47  Identities=32%  Similarity=0.537  Sum_probs=38.9

Q ss_pred             cCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHH-Hhhhc
Q psy15165        502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRH-MRTHT  556 (606)
Q Consensus       502 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H-~~~H~  556 (606)
                      -|-+|++.|....-|..|++..|        |+|.+|.|...+--.|..| |.+|.
T Consensus        12 wcwycnrefddekiliqhqkakh--------fkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH--------FKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc--------ceeeeehhhhccCCCceeehhhhhh
Confidence            48899999999999999988555        8999999988888888888 55664

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.03  E-value=0.11  Score=30.07  Aligned_cols=18  Identities=33%  Similarity=0.829  Sum_probs=8.6

Q ss_pred             cCCCCCCcCCChHHHHHhh
Q psy15165        502 QCPHCPKTFPRKTELSNHI  520 (606)
Q Consensus       502 ~C~~C~~~f~~~~~L~~H~  520 (606)
                      .|+.||+.| ....|.+|+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            455555555 344444444

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.24  E-value=0.16  Score=29.45  Aligned_cols=20  Identities=25%  Similarity=0.650  Sum_probs=17.7

Q ss_pred             cccccchhccChhhHHHHHhh
Q psy15165        534 VCEYCNKEFTFLQYLKRHMRT  554 (606)
Q Consensus       534 ~C~~C~k~f~~~~~L~~H~~~  554 (606)
                      .|+.||+.| ....|.+|+.+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHHh
Confidence            699999999 78899999864

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.29  E-value=0.18  Score=31.86  Aligned_cols=22  Identities=32%  Similarity=0.656  Sum_probs=13.5

Q ss_pred             cccccccchhccChhhHHHHHh
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHMR  553 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~~  553 (606)
                      +|.|.+|++.|.....+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            3556666666666666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.26  E-value=0.13  Score=54.59  Aligned_cols=72  Identities=28%  Similarity=0.490  Sum_probs=50.8

Q ss_pred             cccCCCCCCcCCChHHHHHhhhc-ccccCCCC--cccccc--ccchhccChhhHHHHHhhhcCCCCccc--c-cCccCCc
Q psy15165        500 FLQCPHCPKTFPRKTELSNHIKG-IHMKHELR--QTFVCE--YCNKEFTFLQYLKRHMRTHTNEKPYKC--V-CGLGFNF  571 (606)
Q Consensus       500 ~~~C~~C~~~f~~~~~L~~H~~~-~H~~~~~~--k~y~C~--~C~k~f~~~~~L~~H~~~H~~~kp~~C--~-C~~~F~~  571 (606)
                      .+.|..|...|.....|..|.+. .|   +++  +++.|+  .|++.|.+...+..|..+|++..++.|  . |...+..
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h---~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNH---SGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSP  365 (467)
T ss_pred             CCCCccccCCcccccccccccccccc---ccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccc
Confidence            36777777777777777777764 34   666  777777  677777777777777777777777777  2 6666555


Q ss_pred             hhh
Q psy15165        572 NVS  574 (606)
Q Consensus       572 ~~~  574 (606)
                      ...
T Consensus       366 ~~~  368 (467)
T COG5048         366 LLN  368 (467)
T ss_pred             ccC
Confidence            443

>smart00451 ZnF_U1 U1-like zinc finger

Probab=88.36  E-value=0.4  Score=30.23  Aligned_cols=22  Identities=27%  Similarity=0.558  Sum_probs=20.2

Q ss_pred             cccCCCCCCcCCChHHHHHhhh
Q psy15165        500 FLQCPHCPKTFPRKTELSNHIK  521 (606)
Q Consensus       500 ~~~C~~C~~~f~~~~~L~~H~~  521 (606)
                      +|.|.+|++.|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            3789999999999999999986

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>TIGR00622 ssl1 transcription factor ssl1

Probab=88.29  E-value=0.65  Score=38.00  Aligned_cols=93  Identities=19%  Similarity=0.278  Sum_probs=53.3

Q ss_pred             CCcccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHhhh
Q psy15165        442 EVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIK  521 (606)
Q Consensus       442 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~  521 (606)
                      +.|..|++||.+......|.+-..---...++...          .+.      .....-.|--|...|........=  
T Consensus        13 ~LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev----------~~~------~~~~~~~C~~C~~~f~~~~~~~~~--   74 (112)
T TIGR00622        13 ELPVECPICGLTLILSTHLARSYHHLFPLKAFQEI----------PLE------EYNGSRFCFGCQGPFPKPPVSPFD--   74 (112)
T ss_pred             CCCCcCCcCCCEEeccchHHHhhhccCCCcccccc----------ccc------ccCCCCcccCcCCCCCCccccccc--
Confidence            56778999999888887777643211112221100          000      000013488888888765321100  


Q ss_pred             cccccCCCCccccccccchhccChhhHHHHHhhhc
Q psy15165        522 GIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       522 ~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                          .-.....|.|+.|...|-..=..-.|...|.
T Consensus        75 ----~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        75 ----ELKDSHRYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             ----ccccccceeCCCCCCccccccchhhhhhccC
Confidence                0123446888888888888888888877775

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG4173|consensus

Probab=88.11  E-value=0.15  Score=45.68  Aligned_cols=52  Identities=27%  Similarity=0.521  Sum_probs=32.4

Q ss_pred             cCCCCCCcCCChHHHHHhhhcccc------cCCCCccccccc--cchhccChhhHHHHHh
Q psy15165        502 QCPHCPKTFPRKTELSNHIKGIHM------KHELRQTFVCEY--CNKEFTFLQYLKRHMR  553 (606)
Q Consensus       502 ~C~~C~~~f~~~~~L~~H~~~~H~------~~~~~k~y~C~~--C~k~f~~~~~L~~H~~  553 (606)
                      .|..|.+.|++...|..|+...|.      ...|...|.|-+  |+-.|.+...-..|+-
T Consensus       108 sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I  167 (253)
T KOG4173|consen  108 SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMI  167 (253)
T ss_pred             hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHH
Confidence            477777777777777777765551      112344566644  6666666666666643

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=87.55  E-value=0.52  Score=39.05  Aligned_cols=23  Identities=26%  Similarity=0.648  Sum_probs=16.9

Q ss_pred             ccCCCCCCcCCChHHHHHhhhccc
Q psy15165        501 LQCPHCPKTFPRKTELSNHIKGIH  524 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~~~H  524 (606)
                      ..|..|+.+..- +.+..|++..|
T Consensus        12 lIC~~C~~av~~-~~v~~HL~~~H   34 (109)
T PF12013_consen   12 LICRQCQYAVQP-SEVESHLRKRH   34 (109)
T ss_pred             EEeCCCCcccCc-hHHHHHHHHhc
Confidence            568888877766 77888887555

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=86.83  E-value=0.24  Score=34.08  Aligned_cols=26  Identities=35%  Similarity=0.841  Sum_probs=18.2

Q ss_pred             ccccCCCCCCcCCChHHHHHhhhccc
Q psy15165        499 FFLQCPHCPKTFPRKTELSNHIKGIH  524 (606)
Q Consensus       499 ~~~~C~~C~~~f~~~~~L~~H~~~~H  524 (606)
                      ..+.||.||..|.....+.+|+...|
T Consensus        16 ~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          16 EFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             eeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            33777777777777777777776555

>KOG4173|consensus

Probab=86.21  E-value=0.34  Score=43.46  Aligned_cols=76  Identities=22%  Similarity=0.534  Sum_probs=62.0

Q ss_pred             ccCCC--CCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHh-hhc---------CCCCccc--c-c
Q psy15165        501 LQCPH--CPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMR-THT---------NEKPYKC--V-C  565 (606)
Q Consensus       501 ~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~-~H~---------~~kp~~C--~-C  565 (606)
                      |.|++  |...|.+...+..|....|   +    -.|.+|.+.|.+...|..|+. .|.         |.--|.|  . |
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h---~----~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgC  152 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLH---G----NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGC  152 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhcc---c----chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhh
Confidence            78876  8899999998998875445   4    369999999999999999985 343         5556999  3 9


Q ss_pred             CccCCchhhHHHhhhccc
Q psy15165        566 GLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       566 ~~~F~~~~~L~~H~~~h~  583 (606)
                      +..|.+......|+-.-|
T Consensus       153 t~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  153 TEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhhhhHHHHhc
Confidence            999999999999975444

>KOG2893|consensus

Probab=86.07  E-value=0.25  Score=45.22  Aligned_cols=62  Identities=26%  Similarity=0.449  Sum_probs=48.3

Q ss_pred             CccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhccccCC
Q psy15165        530 RQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMNSVSG  596 (606)
Q Consensus       530 ~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~~~~~  596 (606)
                      .|++ |.+|++.|.....|..|++    .|-|+|. |.+...+--.|..|-...|.+.+-+-++.+.|
T Consensus         9 ~kpw-cwycnrefddekiliqhqk----akhfkchichkkl~sgpglsihcmqvhketid~ip~av~g   71 (341)
T KOG2893|consen    9 DKPW-CWYCNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIHCMQVHKETIDKIPAAVHG   71 (341)
T ss_pred             CCce-eeecccccchhhhhhhhhh----hccceeeeehhhhccCCCceeehhhhhhhhhhcccccccC
Confidence            3444 9999999999999999976    4569998 99998899999999666665555555555554

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=84.66  E-value=0.45  Score=29.69  Aligned_cols=10  Identities=50%  Similarity=1.268  Sum_probs=5.1

Q ss_pred             CccccCcchh
Q psy15165        396 KPYKCKDCGA  405 (606)
Q Consensus       396 ~~~~C~~C~~  405 (606)
                      .++.|+.||.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4455555543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=83.71  E-value=0.39  Score=33.12  Aligned_cols=29  Identities=17%  Similarity=0.296  Sum_probs=19.3

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                      .|+.-+.|+.||..|.....+.+|...-+
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            45666677777777777777777765443

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=82.68  E-value=0.81  Score=37.54  Aligned_cols=14  Identities=36%  Similarity=0.790  Sum_probs=7.1

Q ss_pred             ccccccccchhccC
Q psy15165        531 QTFVCEYCNKEFTF  544 (606)
Q Consensus       531 k~y~C~~C~k~f~~  544 (606)
                      .|-.|++||..|.-
T Consensus        25 ~PivCP~CG~~~~~   38 (108)
T PF09538_consen   25 DPIVCPKCGTEFPP   38 (108)
T ss_pred             CCccCCCCCCccCc
Confidence            34455555555543

The function of members of this family is unknown.

>KOG2186|consensus

Probab=80.97  E-value=1  Score=42.05  Aligned_cols=48  Identities=31%  Similarity=0.682  Sum_probs=34.3

Q ss_pred             ccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhccc
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~  583 (606)
                      |.|..||-+..- ..+.+|+...+| .-|.|. |++.|.. ..+..|..==+
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCIT   52 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCIT   52 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhhhcc
Confidence            678888876654 456668877777 668887 8888876 77777875433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	606
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-15
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-11
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		7e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		6e-10
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		7e-09
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		1e-06
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		1e-08
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		8e-05
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-08
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		3e-04
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		7e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		4e-06
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		7e-06
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		3e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		4e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		6e-06
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		4e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		5e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		7e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		2e-06
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-06
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-06
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-05
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		8e-04
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-06
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		7e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		3e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-05
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		4e-06
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		8e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		8e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-05
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		1e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		4e-04
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-05
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-04
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		2e-04
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		4e-04
2eme_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		5e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 87/215 (40%), Gaps = 52/215 (24%)
Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYS 426
           EK Y C  C K F+  ++L  H R HT EKPYKC +CG +F+    L  H+ +       
Sbjct: 19  EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRT------- 71
Query: 427 YETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVY 486
                       H  E    C  CG   ++R+ L  H + H   +               
Sbjct: 72  ------------HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKP-------------- 105
Query: 487 HINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQ 546
                           CP C K+F   ++L+ H++     H   + + C  C K F+   
Sbjct: 106 --------------YACPECGKSF---SQLA-HLRAHQRTHTGEKPYKCPECGKSFSRED 147
Query: 547 YLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQ 580
            L  H RTHT EKPYKC  CG  F+   +L  H++
Sbjct: 148 NLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 340 CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYK 399
           CP CGK F++ + LQ H +     H  EK Y C  C K F+  + L++H R HT EKPYK
Sbjct: 7   CPECGKSFSQSSNLQKHQR----THTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYK 62
Query: 400 CKDCGAAFNHNVSLKNHKNS 419
           C +CG +F+ +  L  H+ +
Sbjct: 63  CPECGKSFSRSDHLSRHQRT 82

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPY 561
           +CP C K+F + + L  H +     H   + + C  C K F+    L++H RTHT EKPY
Sbjct: 6   KCPECGKSFSQSSNLQKHQR----THTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 562 KCV-CGLGFNFNVSLKNHKQ 580
           KC  CG  F+ +  L  H++
Sbjct: 62  KCPECGKSFSRSDHLSRHQR 81

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 339 VCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPY 398
           +C  CG+ FT+   L +H +     H  E+ Y C+ CHK F   ++LR H  +H+ EKP+
Sbjct: 19  ICKFCGRHFTKSYNLLIHERT----HTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF 74
Query: 399 KCKDCGAAFNHNVSLKNHKN 418
           KC++CG  F  + +L  HK 
Sbjct: 75  KCQECGKGFCQSRTLAVHKT 94

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 340 CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYK 399
           C  CGK F R + L  H+    L H   + Y C+YC K F   + +++H  +HT EKP+K
Sbjct: 4   CKICGKSFKRSSTLSTHL----LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK 59
Query: 400 CKDCGAAFNHNVSLKNH 416
           C+ CG AF+ + +L  H
Sbjct: 60  CQVCGKAFSQSSNLITH 76

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 501 LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
             C  C K+F R + LS H+    + H   + + C+YC K F     +K+H   HT EKP
Sbjct: 2   FDCKICGKSFKRSSTLSTHL----LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP 57
Query: 561 YKC-VCGLGFNFNVSLKNHKQK 581
           +KC VCG  F+ + +L  H +K
Sbjct: 58  HKCQVCGKAFSQSSNLITHSRK 79

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 33/51 (64%)
Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           EK Y C  C K F+  + L +H RVHT EKPYKC +CG AF+ N  L NH+
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ 62

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQ 580
           + C  C K F+    L +H R HT EKPYKC+ CG  F+ N  L NH++
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 331 HSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEY--CHKEFTFYNYLRRH 388
           H+H  + HVC  CGK F   ++L+ H     L H  EK + C +  C K F+    LR H
Sbjct: 28  HTHGPRVHVCAECGKAFVESSKLKRH----QLVHTGEKPFQCTFEGCGKRFSLDFNLRTH 83
Query: 389 MRVHTNEKPYKCK--DCGAAFNHNVSLKNH 416
           +R+HT ++PY C    C   F  + +LK+H
Sbjct: 84  VRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 113

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 501 LQCPH--CPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNE 558
           + CPH  C K F   + +  H+      H  R   VC  C K F     LKRH   HT E
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLH----THGPR-VHVCAECGKAFVESSKLKRHQLVHTGE 60
Query: 559 KPYKCV---CGLGFNFNVSLKNH 578
           KP++C    CG  F+ + +L+ H
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTH 83

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 338 HVCP--HCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNE 395
           + CP   C ++F+R AEL  HI+     H  +K + C  C + F+  ++L  H+R HT E
Sbjct: 5   YACPVESCDRRFSRSAELTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 396 KPYKCKDCGAAFNHNVSLKNH 416
           KP+ C  CG  F  +   K H
Sbjct: 61  KPFACDICGRKFARSDERKRH 81

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 503 CP--HCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
           CP   C + F R  EL+ HI+     H  ++ F C  C + F+   +L  H+RTHT EKP
Sbjct: 7   CPVESCDRRFSRSAELTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 561 YKC-VCGLGFNFNVSLKNH 578
           + C +CG  F  +   K H
Sbjct: 63  FACDICGRKFARSDERKRH 81

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 338 HVCP--HCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNE 395
           + CP   C ++F+R A+L  HI+     H  +K + C  C + F+  ++L  H+R HT E
Sbjct: 5   YACPVESCDRRFSRSADLTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 396 KPYKCKDCGAAFNHNVSLKNH 416
           KP+ C  CG  F  +   K H
Sbjct: 61  KPFACDICGRKFARSDERKRH 81

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 503 CP--HCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
           CP   C + F R  +L+ HI+     H  ++ F C  C + F+   +L  H+RTHT EKP
Sbjct: 7   CPVESCDRRFSRSADLTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 561 YKC-VCGLGFNFNVSLKNH 578
           + C +CG  F  +   K H
Sbjct: 63  FACDICGRKFARSDERKRH 81

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 338 HVCP--HCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNE 395
           + CP   C ++F+R  EL  HI+     H  +K + C  C + F+  ++L  H+R HT E
Sbjct: 5   YACPVESCDRRFSRSDELTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 396 KPYKCKDCGAAFNHNVSLKNH 416
           KP+ C  CG  F  +   K H
Sbjct: 61  KPFACDICGRKFARSDERKRH 81

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 503 CP--HCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
           CP   C + F R  EL+ HI+     H  ++ F C  C + F+   +L  H+RTHT EKP
Sbjct: 7   CPVESCDRRFSRSDELTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 561 YKC-VCGLGFNFNVSLKNH 578
           + C +CG  F  +   K H
Sbjct: 63  FACDICGRKFARSDERKRH 81

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 338 HVCP--HCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNE 395
           + CP   C ++F+R  EL  HI+     H  +K + C  C + F+  ++L  H+R HT E
Sbjct: 4   YACPVESCDRRFSRSDELTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 59
Query: 396 KPYKCKDCGAAFNHNVSLKNH 416
           KP+ C  CG  F  +   K H
Sbjct: 60  KPFACDICGRKFARSDERKRH 80

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 503 CP--HCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
           CP   C + F R  EL+ HI+     H  ++ F C  C + F+   +L  H+RTHT EKP
Sbjct: 6   CPVESCDRRFSRSDELTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 61
Query: 561 YKC-VCGLGFNFNVSLKNH 578
           + C +CG  F  +   K H
Sbjct: 62  FACDICGRKFARSDERKRH 80

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 321 EVVHLAIH-KKHSHSGQYHV-CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKE 378
           ++ HL +H +KH+    Y      C ++F+R  +L+ H +    +H   K + C+ C ++
Sbjct: 20  KLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR----RHTGVKPFQCKTCQRK 75
Query: 379 FTFYNYLRRHMRVHTNEKPYKCK--DCGAAFNHNVSLKNHKN 418
           F+  ++L+ H R HT EKP+ C+   C   F  +  L  H N
Sbjct: 76  FSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 338 HVCP--HCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNE 395
           + CP   C ++F+R  EL  HI+     H  +K + C  C + F+  ++L  H+R HT E
Sbjct: 5   YACPVESCDRRFSRSDELTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 396 KPYKCKDCGAAFNHNVSLKNH 416
           KP+ C  CG  F  +   K H
Sbjct: 61  KPFACDICGRKFARSDERKRH 81

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 503 CP--HCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
           CP   C + F R  EL+ HI+     H  ++ F C  C + F+   +L  H+RTHT EKP
Sbjct: 7   CPVESCDRRFSRSDELTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 561 YKC-VCGLGFNFNVSLKNH 578
           + C +CG  F  +   K H
Sbjct: 63  FACDICGRKFARSDERKRH 81

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 28/50 (56%)
Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
           +K Y C+ C   F +   L  H  VHT EKPY+C  CGA FN   +LK H
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 487 HINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEY--CNKEFTF 544
           H+ G  ++ H  ++ +CP   K+F  K +L NHI+     H   + F C +  C K F  
Sbjct: 49  HVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR----VHTGEKPFPCPFPGCGKIFAR 104
Query: 545 LQYLKRHMRTHTNEKPYKC 563
            + LK H RTHT EKP+KC
Sbjct: 105 SENLKIHKRTHTGEKPFKC 123

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 332 SHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRV 391
           S S   H C  CGK F+RK +L+ H++     H   K Y C+ C       + L +H+R+
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRC----HTGVKPYKCKTCDYAAADSSSLNKHLRI 58
Query: 392 HTNEKPYKCKDCGAAFNHN----VSLKNHKNSSCP 422
           H++E+P+KC+ C  A  ++    V L++H   S P
Sbjct: 59  HSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGP 93

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 19/97 (19%)
Query: 372 CEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYL 431
           CE C K F+  + L+ HMR HT  KPYKCK C  A   + SL  H      +++S E   
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL-----RIHSDERPF 65
Query: 432 KHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHI 468
           K              C IC + S   S L  H++ H 
Sbjct: 66  K--------------CQICPYASRNSSQLTVHLRSHT 88

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 324 HLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYN 383
           +L +H +     +   CP CGK + RK  L  H +  +  ++ E+ + C  C + F    
Sbjct: 22  YLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH-EARNCMNRSEQVFTCSVCQETFRRRM 80
Query: 384 YLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
            LR HM  HT E PYKC  C   F     L++H
Sbjct: 81  ELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 501 LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
            +CP C K + RK  L  H +  +  +   Q F C  C + F     L+ HM +HT E P
Sbjct: 36  FECPKCGKCYFRKENLLEH-EARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMP 94
Query: 561 YKC 563
           YKC
Sbjct: 95  YKC 97

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 338 HVCP--HCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNE 395
           + CP   C ++F++   L  HI+     H  +K + C  C + F+  ++L  H+R HT E
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 396 KPYKCKDCGAAFNHNVSLKNH 416
           KP+ C  CG  F  +   K H
Sbjct: 61  KPFACDICGRKFARSDERKRH 81

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 503 CP--HCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
           CP   C + F +   L+ HI+     H  ++ F C  C + F+   +L  H+RTHT EKP
Sbjct: 7   CPVESCDRRFSQSGSLTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 561 YKC-VCGLGFNFNVSLKNH 578
           + C +CG  F  +   K H
Sbjct: 63  FACDICGRKFARSDERKRH 81

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 532 TFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHKQK 581
           +FVCE C + F   ++LKRH R+HTNEKPY C +C   F     L  H QK
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 338 HVCP--HCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNE 395
           + CP   C ++F++K  L  HI+     H  +K + C  C + F+ +  L +H+R HT E
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIR----IHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGE 60
Query: 396 KPYKCKDCGAAF 407
           KP+ C  CG  F
Sbjct: 61  KPFACDICGRKF 72

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 503 CP--HCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
           CP   C + F +KT L  HI+     H  ++ F C  C + F+    L +H+RTHT EKP
Sbjct: 7   CPVESCDRRFSQKTNLDTHIR----IHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKP 62
Query: 561 YKC-VCGLGF 569
           + C +CG  F
Sbjct: 63  FACDICGRKF 72

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 338 HVCP--HCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNE 395
           + CP   C ++F+  + L  HI+     H  +K + C  C + F+  ++L  H+R HT E
Sbjct: 5   YACPVESCDRRFSDSSNLTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 396 KPYKCKDCGAAFNHNVSLKNH 416
           KP+ C  CG  F  +   K H
Sbjct: 61  KPFACDICGRKFARSDERKRH 81

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 503 CP--HCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
           CP   C + F   + L+ HI+     H  ++ F C  C + F+   +L  H+RTHT EKP
Sbjct: 7   CPVESCDRRFSDSSNLTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 561 YKC-VCGLGFNFNVSLKNH 578
           + C +CG  F  +   K H
Sbjct: 63  FACDICGRKFARSDERKRH 81

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 343 CGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKD 402
           CGK FT K++   H+  +HL     + Y C  C K+F   ++L  HM++HT  KPY+C  
Sbjct: 15  CGKSFTHKSQRDRHMS-MHLG---LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70
Query: 403 CGAAFNHNVSLKNHKNSSCPKLY 425
           C   F    S   H  +SC K Y
Sbjct: 71  CAKRFMWRDSFHRHV-TSCTKSY 92

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 338 HVCP--HCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNE 395
           + CP   C ++F++K  L  HI+     H  +K + C  C + F+    L  H+R HT E
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIR----IHTGQKPFQCRICMRNFSQQASLNAHIRTHTGE 60
Query: 396 KPYKCKDCGAAF 407
           KP+ C  CG  F
Sbjct: 61  KPFACDICGRKF 72

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 503 CP--HCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
           CP   C + F +KT L  HI+     H  ++ F C  C + F+    L  H+RTHT EKP
Sbjct: 7   CPVESCDRRFSQKTNLDTHIR----IHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKP 62
Query: 561 YKC-VCGLGF 569
           + C +CG  F
Sbjct: 63  FACDICGRKF 72

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 368 KTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
           + Y C+ C K F+  + L +H R HT EKPYKC +CG AF     L  H
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 530 RQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNH 578
           R+ + C+ C K F+    L +H RTHT EKPYKC  CG  F     L  H
Sbjct: 16  RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 338 HVCPH--CGKKFTRKAELQLHIKGIHLKHQLEKTYICEY--CHKEFTFYNYLRRHMRVHT 393
           H C +  CGK +T+ + L+ H++     H  EK Y C++  C  +F   + L RH R HT
Sbjct: 7   HTCDYAGCGKTYTKSSHLKAHLR----THTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 62
Query: 394 NEKPYKCKDCGAAFNHNVSLKNH 416
             +P++C+ C  AF+ +  L  H
Sbjct: 63  GHRPFQCQKCDRAFSRSDHLALH 85

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 338 HVCPH--CGKKFTRKAELQLHIKGIHLKHQLEKTYICEY--CHKEFTFYNYLRRHMRVHT 393
           H C +  CGK +T+ + L+ H++     H  EK Y C++  C  +F   + L RH R HT
Sbjct: 6   HTCDYAGCGKTYTKSSHLKAHLR----THTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 394 NEKPYKCKDCGAAFNHNVSLKNH 416
             +P++C+ C  AF+ +  L  H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALH 84

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 315 CDICSA---EVVHLAIHKKHSHSGQ-YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTY 370
           C+IC     +V HL  HK  SHSG+  + CP CG +F RK  +  H++       + K Y
Sbjct: 10  CEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVR--SHDGSVGKPY 66
Query: 371 ICEYCHKEFTFYNYLRRHMR-VHTN 394
           IC+ C K F+  ++L  H++ VH+ 
Sbjct: 67  ICQSCGKGFSRPDHLNGHIKQVHSG 91

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 337 YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEK 396
           Y++C  C + +     L+ H       H  EK Y C YC K F    Y  +H   HT E+
Sbjct: 22  YYICIVCKRSYVCLTSLRRHFN----IHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGER 77
Query: 397 PYKCKDCGAAFNHNVSLKNHKNS 419
            Y+C  CG +F +   + +H  S
Sbjct: 78  RYQCLACGKSFINYQFMSSHIKS 100

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 368 KTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKN 418
           K + C  C + F+  ++L  H+R HT EKP+ C  CG  F  +   K H++
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD 52

>pdb|2EME|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 725- 757) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNEKP 397
           EK Y+C+YC K F     L RH R+HT EKP
Sbjct: 10  EKPYVCDYCGKAFGLSAELVRHQRIHTGEKP 40

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 25/45 (55%)
Query: 372 CEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
           C YC K F    YL  H+R HT EKPYKC+ C  A     SL+ H
Sbjct: 7   CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYH 51

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	606
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-23
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-19
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-17
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-20
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-12
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-10
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-08
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-08
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-19
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-15
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-13
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-19
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-08
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	9e-19
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-07
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-17
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-12
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-17
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-13
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-13
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-11
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-17
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-14
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	8e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-11
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-11
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-07
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-17
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-15
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	8e-17
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-11
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	9e-17
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-16
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-16
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-16
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-11
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-09
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-15
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	9e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-15
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-15
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-15
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-14
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-14
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-12
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-14
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-13
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-12
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	9e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-08
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-07
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-07
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	5e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	8e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-08
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-08
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-07
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	8e-08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-08
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-07
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	7e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	5e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	9e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	7e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	7e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	6e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	6e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	8e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	1e-05
1ard_A	29	Yeast transcription factor ADR1; transcription reg	5e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-05
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	3e-04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	3e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-04
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	5e-04
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	6e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 95.2 bits (238), Expect = 8e-23
 Identities = 69/245 (28%), Positives = 92/245 (37%), Gaps = 78/245 (31%)

Query: 347 FTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAA 406
               +        +      EK Y C  C K F+  ++L  H R HT EKPYKC +CG +
Sbjct: 3   EFGSSSSVAQ-AALEPG---EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKS 58

Query: 407 FNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHG---YEVSNLCYICG-FFSAKRSTLAH 462
           F+    L                  +H +T H G   Y+    C  CG  FS +R+ L  
Sbjct: 59  FSDKKDL-----------------TRHQRT-HTGEKPYK----CPECGKSFS-QRANLRA 95

Query: 463 HIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSG---FFLQCPHCPKTFPRKTELSNH 519
           H     Q R                        H+G   +   CP C K+F +   L  H
Sbjct: 96  H-----Q-RT-----------------------HTGEKPY--ACPECGKSFSQLAHLRAH 124

Query: 520 IKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVS 574
            +  H       T    + C  C K F+    L  H RTHT EKPYKC  CG  F+   +
Sbjct: 125 -QRTH-------TGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDA 176

Query: 575 LKNHK 579
           L  H+
Sbjct: 177 LNVHQ 181

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 85.6 bits (213), Expect = 2e-19
 Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 9/138 (6%)

Query: 281 CYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQY-HV 339
           C  CG    ++  L  H R   GE   K  +   C    ++  +L  H++ +H+G+  + 
Sbjct: 52  CPECGKSFSDKKDLTRHQRTHTGE---KPYKCPECGKSFSQRANLRAHQR-THTGEKPYA 107

Query: 340 CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYK 399
           CP CGK F++ A L+ H       H  EK Y C  C K F+  + L  H R HT EKPYK
Sbjct: 108 CPECGKSFSQLAHLRAH----QRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYK 163

Query: 400 CKDCGAAFNHNVSLKNHK 417
           C +CG +F+   +L  H+
Sbjct: 164 CPECGKSFSRRDALNVHQ 181

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 79.0 bits (196), Expect = 3e-17
 Identities = 70/250 (28%), Positives = 90/250 (36%), Gaps = 81/250 (32%)

Query: 324 HLAIHKKHSHSGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFY 382
                      G+  + CP CGK F+R   L  H +  H     EK Y C  C K F+  
Sbjct: 8   SSVAQAA-LEPGEKPYACPECGKSFSRSDHLAEH-QRTHTG---EKPYKCPECGKSFSDK 62

Query: 383 NYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYL-KHLKTNHHG- 440
             L RH R HT EKPYKC +                  C K +S    L  H +T H G 
Sbjct: 63  KDLTRHQRTHTGEKPYKCPE------------------CGKSFSQRANLRAHQRT-HTGE 103

Query: 441 --YEVSNLCYICG-FFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHS 497
             Y     C  CG  FS + + L  H          Q+                    H+
Sbjct: 104 KPYA----CPECGKSFS-QLAHLRAH----------QR-------------------THT 129

Query: 498 G---FFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKR 550
           G   +  +CP C K+F R+  L  H +  H       T    + C  C K F+    L  
Sbjct: 130 GEKPY--KCPECGKSFSREDNLHTH-QRTH-------TGEKPYKCPECGKSFSRRDALNV 179

Query: 551 HMRTHTNEKP 560
           H RTHT +K 
Sbjct: 180 HQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 57.1 bits (139), Expect = 1e-09
 Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 9/118 (7%)

Query: 281 CYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQY-HV 339
           C  CG     R+ L+ H R   GE      E   C    +++ HL  H++ +H+G+  + 
Sbjct: 80  CPECGKSFSQRANLRAHQRTHTGEKPYACPE---CGKSFSQLAHLRAHQR-THTGEKPYK 135

Query: 340 CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKP 397
           CP CGK F+R+  L  H       H  EK Y C  C K F+  + L  H R HT +K 
Sbjct: 136 CPECGKSFSREDNLHTH----QRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 50.5 bits (122), Expect = 2e-07
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 13/76 (17%)

Query: 509 TFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV 564
           +    +        +             + C  C K F+   +L  H RTHT EKPYKC 
Sbjct: 2   SEFGSSSSVAQ-AALE-------PGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCP 53

Query: 565 -CGLGFNFNVSLKNHK 579
            CG  F+    L  H+
Sbjct: 54  ECGKSFSDKKDLTRHQ 69

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 85.2 bits (212), Expect = 2e-20
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 8/96 (8%)

Query: 324 HLAIHKKHSHSGQ--YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTF 381
             +  +      +  +  C  CG+ FT+   L +H +  H     E+ Y C+ CHK F  
Sbjct: 4   GSSGGRL-PSKTKKEFI-CKFCGRHFTKSYNLLIH-ERTHTD---ERPYTCDICHKAFRR 57

Query: 382 YNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
            ++LR H  +H+ EKP+KC++CG  F  + +L  HK
Sbjct: 58  QDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK 93

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 63.2 bits (155), Expect = 1e-12
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 324 HLAIHKKHSHSGQ--YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTF 381
           +L IH++ +H+ +  Y  C  C K F R+  L+ H + IH K   EK + C+ C K F  
Sbjct: 32  NLLIHER-THTDERPYT-CDICHKAFRRQDHLRDH-RYIHSK---EKPFKCQECGKGFCQ 85

Query: 382 YNYLRRHMRVHTNEKPYKC 400
              L  H  +H        
Sbjct: 86  SRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 56.7 bits (138), Expect = 2e-10
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 13/83 (15%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTN 557
            C  C + F +   L  H +  H       T    + C+ C+K F    +L+ H   H+ 
Sbjct: 19  ICKFCGRHFTKSYNLLIH-ERTH-------TDERPYTCDICHKAFRRQDHLRDHRYIHSK 70

Query: 558 EKPYKC-VCGLGFNFNVSLKNHK 579
           EKP+KC  CG GF  + +L  HK
Sbjct: 71  EKPFKCQECGKGFCQSRTLAVHK 93

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 50.5 bits (122), Expect = 4e-08
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
           F+C++C + FT    L  H RTHT+E+PY C +C   F     L++H+
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR 65

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 49.7 bits (120), Expect = 8e-08
 Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 12/66 (18%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTN 557
            C  C K F R+  L +H + IH       +    F C+ C K F   + L  H   H  
Sbjct: 47  TCDICHKAFRRQDHLRDH-RYIH-------SKEKPFKCQECGKGFCQSRTLAVHKTLHMQ 98

Query: 558 EKPYKC 563
                 
Sbjct: 99  TSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 41.7 bits (99), Expect = 5e-05
 Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)

Query: 547 YLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
                      +K + C  CG  F  + +L  H+
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHE 37

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 81.7 bits (203), Expect = 3e-19
 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 340 CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYK 399
           C  CGK F+RK +L+ H++     H   K Y C+ C       + L +H+R+H++E+P+K
Sbjct: 11  CEVCGKCFSRKDKLKTHMR----CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK 66

Query: 400 CKDCGAAFNHNVSLKNHK 417
           C+ C  A  ++  L  H 
Sbjct: 67  CQICPYASRNSSQLTVHL 84

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 70.5 bits (174), Expect = 3e-15
 Identities = 22/51 (43%), Positives = 27/51 (52%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
              + CE C K F+  + L+ HMR HT  KPYKCK C  A   + SL  H 
Sbjct: 6   SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL 56

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 65.9 bits (162), Expect = 1e-13
 Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 8/79 (10%)

Query: 324 HLAIHKKHSHSGQ--YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTF 381
            L  H +  H+G   Y  C  C       + L  H++     H  E+ + C+ C      
Sbjct: 23  KLKTHMR-CHTGVKPYK-CKTCDYAAADSSSLNKHLR----IHSDERPFKCQICPYASRN 76

Query: 382 YNYLRRHMRVHTNEKPYKC 400
            + L  H+R HT +     
Sbjct: 77  SSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 54.0 bits (131), Expect = 2e-09
 Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
           CE C K F+    LK HMR HT  KPYKC  C      + SL  H 
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL 56

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 52.0 bits (126), Expect = 9e-09
 Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 12/65 (18%)

Query: 503 CPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTNE 558
           C  C       + L+ H++ IH       +    F C+ C         L  H+R+HT +
Sbjct: 39  CKTCDYAAADSSSLNKHLR-IH-------SDERPFKCQICPYASRNSSQLTVHLRSHTGD 90

Query: 559 KPYKC 563
                
Sbjct: 91  SGPSS 95

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 80.6 bits (200), Expect = 5e-19
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 324 HLAIHKKHSHSGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFY 382
                 + +H+G+  + C HC K F +K  L +H K  H  + +   ++C  C K FT  
Sbjct: 2   SSGSSGR-THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60

Query: 383 NYLRRHMRVHTNEKPYKCKDCGAAF 407
           N + RH          + ++ G + 
Sbjct: 61  NTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 59.5 bits (145), Expect = 2e-11
 Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPY 561
            C HC KTF +K  L  H K  H  + +   FVC  C K FT    + RH          
Sbjct: 17  ACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGV 76

Query: 562 KCV-CGLGF 569
           +    G   
Sbjct: 77  EGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 51.4 bits (124), Expect = 1e-08
 Identities = 12/33 (36%), Positives = 12/33 (36%)

Query: 385 LRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                R HT EKPY C  C   F     L  H 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHF 35

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 44.4 bits (106), Expect = 4e-06
 Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 5/52 (9%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNE----KPYKCV-CGLGFNFNVSLKNHK 579
           + C +C+K F   Q L  H + + +       + C  CG  F    ++  H 
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA 67

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 41.4 bits (98), Expect = 4e-05
 Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)

Query: 548 LKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQ 580
                RTHT EKPY C  C   F     L  H +
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK 36

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 80.2 bits (199), Expect = 9e-19
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 340 CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYK 399
           C  CGK F R + L  H     L H   + Y C+YC K F   + +++H  +HT EKP+K
Sbjct: 4   CKICGKSFKRSSTLSTH----LLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK 59

Query: 400 CKDCGAAFNHNVSLKNHK 417
           C+ CG AF+ + +L  H 
Sbjct: 60  CQVCGKAFSQSSNLITHS 77

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 63.2 bits (155), Expect = 8e-13
 Identities = 15/49 (30%), Positives = 27/49 (55%)

Query: 369 TYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           ++ C+ C K F   + L  H+ +H++ +PY C+ CG  F+    +K H 
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT 49

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 58.2 bits (142), Expect = 4e-11
 Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 13/83 (15%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTN 557
            C  C K+F R + LS H   IH       +    + C+YC K F     +K+H   HT 
Sbjct: 3   DCKICGKSFKRSSTLSTH-LLIH-------SDTRPYPCQYCGKRFHQKSDMKKHTFIHTG 54

Query: 558 EKPYKC-VCGLGFNFNVSLKNHK 579
           EKP+KC VCG  F+ + +L  H 
Sbjct: 55  EKPHKCQVCGKAFSQSSNLITHS 77

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 49.0 bits (118), Expect = 7e-08
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 532 TFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
           +F C+ C K F     L  H+  H++ +PY C  CG  F+    +K H 
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT 49

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 46.6 bits (112), Expect = 6e-07
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 8/72 (11%)

Query: 324 HLAIHKKHSHSGQ--YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTF 381
            L+ H    HS    Y  C +CGK+F +K++++ H   IH     EK + C+ C K F+ 
Sbjct: 16  TLSTHLL-IHSDTRPY-PCQYCGKRFHQKSDMKKHTF-IHTG---EKPHKCQVCGKAFSQ 69

Query: 382 YNYLRRHMRVHT 393
            + L  H R HT
Sbjct: 70  SSNLITHSRKHT 81

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 77.5 bits (192), Expect = 1e-17
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 342 HCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCK 401
            C ++F++   L  HI+     H  +K + C  C + F+  ++L  H+R HT EKP+ C 
Sbjct: 11  SCDRRFSQSGSLTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66

Query: 402 DCGAAFNHNVSLKNHK 417
            CG  F  +   K H 
Sbjct: 67  ICGRKFARSDERKRHT 82

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 62.1 bits (152), Expect = 2e-12
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 13/80 (16%)

Query: 505 HCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
            C + F +   L+ HI+ IH       T    F C  C + F+   +L  H+RTHT EKP
Sbjct: 11  SCDRRFSQSGSLTRHIR-IH-------TGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 561 YKC-VCGLGFNFNVSLKNHK 579
           + C +CG  F  +   K H 
Sbjct: 63  FACDICGRKFARSDERKRHT 82

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 54.4 bits (132), Expect = 1e-09
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 324 HLAIHKKHSHSGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFY 382
            L  H +  H+GQ    C  C + F+R   L  HI+     H  EK + C+ C ++F   
Sbjct: 21  SLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIR----THTGEKPFACDICGRKFARS 75

Query: 383 NYLRRHMRVHTNEK 396
           +  +RH ++H  +K
Sbjct: 76  DERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 47.5 bits (114), Expect = 4e-07
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 12/62 (19%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTN 557
           QC  C + F R   L+ HI+  H       T    F C+ C ++F      KRH + H  
Sbjct: 36  QCRICMRNFSRSDHLTTHIR-TH-------TGEKPFACDICGRKFARSDERKRHTKIHLR 87

Query: 558 EK 559
           +K
Sbjct: 88  QK 89

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 79.2 bits (196), Expect = 1e-17
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 8/85 (9%)

Query: 340 CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYC-----HKEFTFYNYLRRHMRVHTN 394
              C ++F  + +L  HI   H+ H   K ++C +       + F     L  HMR HT 
Sbjct: 6   WDGCSQEFDSQEQLVHHINSEHI-HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64

Query: 395 EKPYKCK--DCGAAFNHNVSLKNHK 417
           EKP+KC    C  +++   +LK H 
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHL 89

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 67.2 bits (165), Expect = 2e-13
 Identities = 43/211 (20%), Positives = 72/211 (34%), Gaps = 72/211 (34%)

Query: 215 FKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGG 274
            +   C  + +S ++L+ H++ + +H  +   +   C                       
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGER-KEF--VCHWGG------------------- 41

Query: 275 YETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHS 334
                 C       K +  L  H+R                                 H+
Sbjct: 42  ------CSRELRPFKAQYMLVVHMRR--------------------------------HT 63

Query: 335 GQY-HVCPH--CGKKFTRKAELQLHIKGIHLKHQLEKTYICEY--CHKEFTFYNYLRRHM 389
           G+  H C    C K ++R   L+ H++     H  EK Y+CE+  C K F+  +   +H 
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLR----SHTGEKPYMCEHEGCSKAFSNASDRAKHQ 119

Query: 390 -RVHTNEKPYKCK--DCGAAFNHNVSLKNHK 417
            R H+NEKPY CK   C   +    SL+ H 
Sbjct: 120 NRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV 150

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 66.1 bits (162), Expect = 4e-13
 Identities = 42/198 (21%), Positives = 68/198 (34%), Gaps = 61/198 (30%)

Query: 395 EKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFS 454
           E   +   C   F+    L +H NS            +H+      +     C+  G   
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINS------------EHIHGERKEFV----CHWGGCSR 44

Query: 455 AKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSG---FFLQCPHCPKTFP 511
             R               K +          Y +  H++ +H+G          C K++ 
Sbjct: 45  ELRP-------------FKAQ----------YMLVVHMR-RHTGEKPHKCTFEGCRKSYS 80

Query: 512 RKTELSNHIKGIHMKHELRQT----FVCEY--CNKEFTFLQYLKRHM-RTHTNEKPYKCV 564
           R   L  H++  H       T    ++CE+  C+K F+      +H  RTH+NEKPY C 
Sbjct: 81  RLENLKTHLR-SH-------TGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCK 132

Query: 565 ---CGLGFNFNVSLKNHK 579
              C   +    SL+ H 
Sbjct: 133 LPGCTKRYTDPSSLRKHV 150

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 59.9 bits (146), Expect = 6e-11
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 17/87 (19%)

Query: 503 CPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEY--CNKEFTFLQYLKRHMRTHT 556
           C    + F  +  L  H++  H       T      C +  C K ++ L+ LK H+R+HT
Sbjct: 42  CSRELRPFKAQYMLVVHMR-RH-------TGEKPHKCTFEGCRKSYSRLENLKTHLRSHT 93

Query: 557 NEKPYKC---VCGLGFNFNVSLKNHKQ 580
            EKPY C    C   F+       H+ 
Sbjct: 94  GEKPYMCEHEGCSKAFSNASDRAKHQN 120

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 58.4 bits (142), Expect = 2e-10
 Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 22/159 (13%)

Query: 249 FKCRVCDWKLNSYDKLLRHIKSDH-GGYETSSLCYHCGYYS-----KNRSTLKNHVRVEH 302
            +   C  + +S ++L+ HI S+H  G     +C+  G        K +  L  H+R   
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 303 GE--NQAKRKEKKICDICSAEVVHLAIHKKHSHSGQ--YHVCPH--CGKKFTRKAELQLH 356
           GE  ++   +    C    + + +L  H + SH+G+  Y +C H  C K F+  ++   H
Sbjct: 64  GEKPHKCTFEG---CRKSYSRLENLKTHLR-SHTGEKPY-MCEHEGCSKAFSNASDRAKH 118

Query: 357 IKGIHLKHQLEKTYICEY--CHKEFTFYNYLRRHMRVHT 393
               H     EK Y+C+   C K +T  + LR+H++   
Sbjct: 119 QNRTHSN---EKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 56.8 bits (138), Expect = 8e-10
 Identities = 13/59 (22%), Positives = 18/59 (30%), Gaps = 8/59 (13%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHM---RVHTNEKPYKCKDCGA-----AFNHNVSLKNHK 417
           E     + C +EF     L  H+    +H   K + C   G       F     L  H 
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM 59

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 76.8 bits (190), Expect = 2e-17
 Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 5/78 (6%)

Query: 340 CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYK 399
           C  C + F+R   L  HI+     H  EK + C+ C ++F   +  +RH  +     P  
Sbjct: 6   CRICMRNFSRSDHLTTHIR----THTGEKPFACDICGRKFARSDERKRHRDIQH-ILPIL 60

Query: 400 CKDCGAAFNHNVSLKNHK 417
                   + N  L+N  
Sbjct: 61  EDKVEELLSKNYHLENEV 78

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 66.8 bits (164), Expect = 5e-14
 Identities = 18/50 (36%), Positives = 27/50 (54%)

Query: 368 KTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           K + C  C + F+  ++L  H+R HT EKP+ C  CG  F  +   K H+
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR 51

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 63.3 bits (155), Expect = 8e-13
 Identities = 21/84 (25%), Positives = 29/84 (34%), Gaps = 14/84 (16%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTN 557
           QC  C + F R   L+ HI+  H       T    F C+ C ++F      KRH      
Sbjct: 5   QCRICMRNFSRSDHLTTHIR-TH-------TGEKPFACDICGRKFARSDERKRHRDIQH- 55

Query: 558 EKPYKC-VCGLGFNFNVSLKNHKQ 580
             P          + N  L+N   
Sbjct: 56  ILPILEDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 60.6 bits (148), Expect = 7e-12
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
           F C  C + F+   +L  H+RTHT EKP+ C +CG  F  +   K H+
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR 51

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 49.4 bits (119), Expect = 7e-08
 Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 15/90 (16%)

Query: 315 CDICS---AEVVHLAIHKKHSHSGQ--YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKT 369
           C IC    +   HL  H + +H+G+  +  C  CG+KF R  E + H   I         
Sbjct: 6   CRICMRNFSRSDHLTTHIR-THTGEKPFA-CDICGRKFARSDERKRHRD-IQH----ILP 58

Query: 370 YICEYCHKEFTFYNYLRRH---MRVHTNEK 396
            + +   +  +   +L      ++    E+
Sbjct: 59  ILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 8/61 (13%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFT---FLQYLKRHMRTHTNE 558
            C  C + F R  E   H   I   H L    + +   +  +    L+     ++    E
Sbjct: 33  ACDICGRKFARSDERKRHRD-IQ--HILP--ILEDKVEELLSKNYHLENEVARLKKLVGE 87

Query: 559 K 559
           +
Sbjct: 88  R 88

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 76.8 bits (190), Expect = 4e-17
 Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 341 PHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEY--CHKEFTFYNYLRRHMRVHTNEKPY 398
           P C K++ + + LQ+H +    KH  EK Y C++  C + F+  + L+RH R HT  KP+
Sbjct: 12  PGCNKRYFKLSHLQMHSR----KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67

Query: 399 KCKDCGAAFNHNVSLKNHK 417
           +CK C   F+ +  LK H 
Sbjct: 68  QCKTCQRKFSRSDHLKTHT 86

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 61.4 bits (150), Expect = 1e-11
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 15/84 (17%)

Query: 503 CPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTNE 558
              C + F R  +L  H +  H       T    F C+ C ++F+   +LK H RTHT E
Sbjct: 41  FKDCERRFSRSDQLKRHQR-RH-------TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGE 92

Query: 559 KPYKC---VCGLGFNFNVSLKNHK 579
           KP+ C    C   F  +  L  H 
Sbjct: 93  KPFSCRWPSCQKKFARSDELVRHH 116

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 59.1 bits (144), Expect = 6e-11
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 15/83 (18%)

Query: 504 PHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEY--CNKEFTFLQYLKRHMRTHTN 557
           P C K + + + L  H +  H       T    + C++  C + F+    LKRH R HT 
Sbjct: 12  PGCNKRYFKLSHLQMHSR-KH-------TGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63

Query: 558 EKPYKC-VCGLGFNFNVSLKNHK 579
            KP++C  C   F+ +  LK H 
Sbjct: 64  VKPFQCKTCQRKFSRSDHLKTHT 86

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 54.8 bits (133), Expect = 2e-09
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 5/52 (9%)

Query: 533 FVCEY--CNKEFTFLQYLKRHMRTHTNEKPYKCV---CGLGFNFNVSLKNHK 579
           F+C Y  CNK +  L +L+ H R HT EKPY+C    C   F+ +  LK H+
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ 58

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 47.5 bits (114), Expect = 6e-07
 Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 19/110 (17%)

Query: 291 RSTLKNHVRVEHGENQAKRK----EKKICDICSAEVVHLAIHKKHSHSGQ--YHVCPHCG 344
            S L+ H R   GE     K    + K C+   +    L  H++  H+G   +  C  C 
Sbjct: 21  LSHLQMHSRKHTGE-----KPYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQ-CKTCQ 73

Query: 345 KKFTRKAELQLHIKGIHLKHQLEKTYICEY--CHKEFTFYNYLRRHMRVH 392
           +KF+R   L+ H +     H  EK + C +  C K+F   + L RH  +H
Sbjct: 74  RKFSRSDHLKTHTR----THTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 38.7 bits (91), Expect = 7e-04
 Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 14/60 (23%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEY--CNKEFTFLQYLKRHMRTH 555
           QC  C + F R   L  H +  H       T    F C +  C K+F     L RH   H
Sbjct: 68  QCKTCQRKFSRSDHLKTHTR-TH-------TGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 77.7 bits (192), Expect = 5e-17
 Identities = 40/214 (18%), Positives = 58/214 (27%), Gaps = 83/214 (38%)

Query: 375 CHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHL 434
                           +   +     K C   F+                          
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFST------------------------- 37

Query: 435 KTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKD 494
                                    L  H+                      H+ G  ++
Sbjct: 38  ----------------------MHELVTHVTME-------------------HVGGPEQN 56

Query: 495 KHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEY--CNKEFTFLQYL 548
            H  ++ +CP   K+F  K +L NHI+ +H       T    F C +  C K F   + L
Sbjct: 57  NHVCYWEECPREGKSFKAKYKLVNHIR-VH-------TGEKPFPCPFPGCGKIFARSENL 108

Query: 549 KRHMRTHTNEKPYKCV---CGLGFNFNVSLKNHK 579
           K H RTHT EKP+KC    C   F  +   K H 
Sbjct: 109 KIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM 142

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 71.5 bits (176), Expect = 5e-15
 Identities = 33/131 (25%), Positives = 50/131 (38%), Gaps = 16/131 (12%)

Query: 281 CYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICS------AEVVHLAIHKKHSHS 334
              C         L  HV +EH     +       + C            L  H +  H+
Sbjct: 28  KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHT 86

Query: 335 GQY-HVCPH--CGKKFTRKAELQLHIKGIHLKHQLEKTYICEY--CHKEFTFYNYLRRHM 389
           G+    CP   CGK F R   L++H +     H  EK + CE+  C + F   +  ++HM
Sbjct: 87  GEKPFPCPFPGCGKIFARSENLKIHKR----THTGEKPFKCEFEGCDRRFANSSDRKKHM 142

Query: 390 RVHTNEKPYKC 400
            VHT++K    
Sbjct: 143 HVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 57.3 bits (139), Expect = 6e-10
 Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 10/83 (12%)

Query: 344 GKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYK---- 399
           G   +    ++  +       + + +   + C + F+  + L  H+ +     P +    
Sbjct: 1   GSSGSSGQPIKQELS-CKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV 59

Query: 400 -----CKDCGAAFNHNVSLKNHK 417
                C   G +F     L NH 
Sbjct: 60  CYWEECPREGKSFKAKYKLVNHI 82

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 74.5 bits (184), Expect = 8e-17
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)

Query: 340 CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEY--CHKEFTFYNYLRRHMRVHTNEKP 397
            P CG+ F+ +  L  H K  H+    +K++ C    C K F F  +L+ HM++H++ + 
Sbjct: 12  FPGCGRIFSNRQYLNHHKKYQHIH---QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68

Query: 398 YKCKDCGAAF 407
           Y C+  G + 
Sbjct: 69  YICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 58.3 bits (142), Expect = 3e-11
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 14/74 (18%)

Query: 503 CPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEY--CNKEFTFLQYLKRHMRTHT 556
            P C + F  +  L++H K  H            F C    C K F F ++LK HM+ H+
Sbjct: 12  FPGCGRIFSNRQYLNHHKKYQH-------IHQKSFSCPEPACGKSFNFKKHLKEHMKLHS 64

Query: 557 NEKPYKC-VCGLGF 569
           + + Y C   G   
Sbjct: 65  DTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 6/53 (11%)

Query: 533 FVCEY--CNKEFTFLQYLKRHMR-THTNEKPYKC---VCGLGFNFNVSLKNHK 579
             C++  C + F+  QYL  H +  H ++K + C    CG  FNF   LK H 
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM 60

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 75.2 bits (186), Expect = 9e-17
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 342 HCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCK 401
            CGK FT K++   H+  +HL     + Y C  C K+F   ++L  HM++HT  KPY+C 
Sbjct: 14  QCGKSFTHKSQRDRHMS-MHLG---LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69

Query: 402 DCGAAFNHNVSL 413
            C   F    S 
Sbjct: 70  ICAKRFMWRDSF 81

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 73.6 bits (182), Expect = 4e-16
 Identities = 25/93 (26%), Positives = 32/93 (34%), Gaps = 8/93 (8%)

Query: 324 HLAIHKKHSHSGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFY 382
               H    H G   + C  CGKKF  K  L  H+K IH      K Y C  C K F + 
Sbjct: 24  QRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTG---IKPYECNICAKRFMWR 78

Query: 383 NYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKN 415
           +    H  V +  K Y+               +
Sbjct: 79  DSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 65.5 bits (161), Expect = 3e-13
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           +K Y C+ C K FT  +   RHM +H   +PY C  CG  F     L  H 
Sbjct: 8   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 57

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 50.9 bits (123), Expect = 3e-08
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 13/76 (17%)

Query: 505 HCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
            C K+F  K++   H+  +H            + C  C K+F    +L  HM+ HT  KP
Sbjct: 14  QCGKSFTHKSQRDRHMS-MH-------LGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP 65

Query: 561 YKC-VCGLGFNFNVSL 575
           Y+C +C   F +  S 
Sbjct: 66  YECNICAKRFMWRDSF 81

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 47.4 bits (114), Expect = 6e-07
 Identities = 18/81 (22%), Positives = 24/81 (29%), Gaps = 15/81 (18%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTN 557
            C  C K F  K  L  H+K IH       T    + C  C K F +      H    + 
Sbjct: 39  GCGVCGKKFKMKHHLVGHMK-IH-------TGIKPYECNICAKRFMWRDSF--HRHVTSC 88

Query: 558 EKPYKCV-CGLGFNFNVSLKN 577
            K Y+               +
Sbjct: 89  TKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 43.2 bits (103), Expect = 2e-05
 Identities = 23/91 (25%), Positives = 33/91 (36%), Gaps = 22/91 (24%)

Query: 389 MRVHTNEKPYKCKDCGAAFNHNVSLKNHKN----------SSCPKLYSYETYL-KHLKTN 437
               + +K Y C  CG +F H      H +            C K +  + +L  H+K  
Sbjct: 2   SSGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI- 59

Query: 438 HHG---YEVSNLCYICG-FFSAKRSTLAHHI 464
           H G   YE    C IC   F   R +   H+
Sbjct: 60  HTGIKPYE----CNICAKRFM-WRDSFHRHV 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 40.1 bits (95), Expect = 2e-04
 Identities = 7/28 (25%), Positives = 9/28 (32%)

Query: 552 MRTHTNEKPYKCVCGLGFNFNVSLKNHK 579
               + +K Y C CG  F        H 
Sbjct: 2   SSGSSGDKLYPCQCGKSFTHKSQRDRHM 29

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 74.9 bits (185), Expect = 2e-16
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 9/82 (10%)

Query: 340 CPH--CGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKP 397
           CPH  C K F   + ++ H+   H      + ++C  C K F   + L+RH  VHT EKP
Sbjct: 8   CPHKGCTKMFRDNSAMRKHLH-THG----PRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62

Query: 398 YKC--KDCGAAFNHNVSLKNHK 417
           ++C  + CG  F+ + +L+ H 
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHV 84

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 74.5 bits (184), Expect = 2e-16
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 9/98 (9%)

Query: 324 HLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEY--CHKEFTF 381
            +  H  H+H  + HVC  CGK F   ++L+ H     L H  EK + C +  C K F+ 
Sbjct: 22  AMRKHL-HTHGPRVHVCAECGKAFVESSKLKRH----QLVHTGEKPFQCTFEGCGKRFSL 76

Query: 382 YNYLRRHMRVHTNEKPYKC--KDCGAAFNHNVSLKNHK 417
              LR H+R+HT ++PY C    C   F  + +LK+H 
Sbjct: 77  DFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 60.2 bits (147), Expect = 3e-11
 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 10/83 (12%)

Query: 502 QCPH--CPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEK 559
            CPH  C K F   + +  H+   H      +  VC  C K F     LKRH   HT EK
Sbjct: 7   ACPHKGCTKMFRDNSAMRKHLH-THGP----RVHVCAECGKAFVESSKLKRHQLVHTGEK 61

Query: 560 PYKCV---CGLGFNFNVSLKNHK 579
           P++C    CG  F+ + +L+ H 
Sbjct: 62  PFQCTFEGCGKRFSLDFNLRTHV 84

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 56.4 bits (137), Expect = 5e-10
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 17/87 (19%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEY--CNKEFTFLQYLKRHMRTH 555
            C  C K F   ++L  H   +H       T    F C +  C K F+    L+ H+R H
Sbjct: 36  VCAECGKAFVESSKLKRHQL-VH-------TGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 87

Query: 556 TNEKPYKCV---CGLGFNFNVSLKNHK 579
           T ++PY C    C   F  + +LK+H 
Sbjct: 88  TGDRPYVCPFDGCNKKFAQSTNLKSHI 114

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 55.2 bits (134), Expect = 1e-09
 Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 24/126 (19%)

Query: 284 CGYYSKNRSTLKNHVRVEHGENQAKRKEKK--ICDICS---AEVVHLAIHKKHSHSGQY- 337
           C    ++ S ++ H+   HG         +  +C  C     E   L  H+   H+G+  
Sbjct: 13  CTKMFRDNSAMRKHLHT-HGP--------RVHVCAECGKAFVESSKLKRHQL-VHTGEKP 62

Query: 338 HVCPH--CGKKFTRKAELQLHIKGIHLKHQLEKTYICEY--CHKEFTFYNYLRRHMRVHT 393
             C    CGK+F+    L+ H++ IH     ++ Y+C +  C+K+F     L+ H+  H 
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVR-IHTG---DRPYVCPFDGCNKKFAQSTNLKSHILTHA 118

Query: 394 NEKPYK 399
             K  +
Sbjct: 119 KAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 48.7 bits (117), Expect = 3e-07
 Identities = 43/185 (23%), Positives = 58/185 (31%), Gaps = 80/185 (43%)

Query: 395 EKPYKC--KDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHG---YEVSNLCYI 449
            +   C  K C   F  N +++                 KHL T  HG   +     C  
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMR-----------------KHLHT--HGPRVHV----CAE 39

Query: 450 CG-FFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSG---FFLQCPH 505
           CG  F  + S L  H        +                       H+G   F  QC  
Sbjct: 40  CGKAFV-ESSKLKRHQ------LV-----------------------HTGEKPF--QCTF 67

Query: 506 --CPKTFPRKTELSNHIKGIHMKHELRQT----FVCEY--CNKEFTFLQYLKRHMRTHTN 557
             C K F     L  H++ IH       T    +VC +  CNK+F     LK H+ TH  
Sbjct: 68  EGCGKRFSLDFNLRTHVR-IH-------TGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119

Query: 558 EKPYK 562
            K  +
Sbjct: 120 AKNNQ 124

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 74.9 bits (185), Expect = 1e-15
 Identities = 46/235 (19%), Positives = 66/235 (28%), Gaps = 70/235 (29%)

Query: 364 HQLEKTYICEY--CHKEFTFYNYLRRHMRVHTNEKPYKCK--DCGAAFNHNVSLKNHKNS 419
             + K YIC +  C   +     L+ H+  HT EKP+ CK   C   F     L      
Sbjct: 7   PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT----- 61

Query: 420 SCPKLYSYETYLKHLKTNHHG---YEVSNLC--YICGFFSAKRSTLAHHIQDHIQPRMKQ 474
                       +H  T H G   +     C    C      ++ +  H           
Sbjct: 62  ------------RHSLT-HTGEKNFT----CDSDGCDLRFTTKANMKKH----------- 93

Query: 475 KQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQT-- 532
                               K   +     +C K F +  +L  H    H       T  
Sbjct: 94  FNR-------------FHNIKICVYVCHFENCGKAFKKHNQLKVHQF-SH-------TQQ 132

Query: 533 --FVC--EYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHKQKC 582
             + C  E C+K F+    LKRH + H      K   C            H  +C
Sbjct: 133 LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAEC 187

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 69.2 bits (170), Expect = 8e-14
 Identities = 54/232 (23%), Positives = 77/232 (33%), Gaps = 76/232 (32%)

Query: 341 PHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEY--CHKEFTFYNYLRRHMRVHTNEKPY 398
             CG  + +  +LQ H+     KH  EK + C+   C K FT  ++L RH   HT EK +
Sbjct: 18  ADCGAAYNKNWKLQAHLC----KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNF 73

Query: 399 KCKD--CGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHG-----YEVSNLCYI-- 449
            C    C   F    ++K                 KH     H      Y     C+   
Sbjct: 74  TCDSDGCDLRFTTKANMK-----------------KHFNR-FHNIKICVYV----CHFEN 111

Query: 450 CGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSG---FFLQCPH- 505
           CG    K + L  H          Q                     H+    +  +CPH 
Sbjct: 112 CGKAFKKHNQLKVH----------QFS-------------------HTQQLPY--ECPHE 140

Query: 506 -CPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHT 556
            C K F   + L  H K +H  +  ++   C +  K +T   YLK     H 
Sbjct: 141 GCDKRFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWT--LYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 64.2 bits (157), Expect = 4e-12
 Identities = 28/134 (20%), Positives = 42/134 (31%), Gaps = 13/134 (9%)

Query: 291 RSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQYHV-----CPHCGK 345
              L  H     GE          CD+      ++  H                  +CGK
Sbjct: 57  LHHLTRHSLTHTGEKNFTCDSDG-CDLRFTTKANMKKHFN-RFHNIKICVYVCHFENCGK 114

Query: 346 KFTRKAELQLHIKGIHLKHQLEKTYIC--EYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC 403
            F +  +L++H    H +   +  Y C  E C K F+  + L+RH +VH      K   C
Sbjct: 115 AFKKHNQLKVHQF-SHTQ---QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSC 170

Query: 404 GAAFNHNVSLKNHK 417
                       H 
Sbjct: 171 SFVGKTWTLYLKHV 184

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 70.9 bits (175), Expect = 1e-15
 Identities = 23/51 (45%), Positives = 28/51 (54%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           +K Y C+ C   F +   L  H  VHT EKPY+C  CGA FN   +LK H 
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 59.0 bits (144), Expect = 2e-11
 Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 324 HLAIHKKHSHSGQ--YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTF 381
           H   H          Y  C  C   F  K  L  H K +H     EK Y C  C  +F  
Sbjct: 4   HHHHHSH-MTHSDKPYK-CDRCQASFRYKGNLASH-KTVHTG---EKPYRCNICGAQFNR 57

Query: 382 YNYLRRHMRVHTNEKPY 398
              L+ H R+H+ EKPY
Sbjct: 58  PANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 53.2 bits (129), Expect = 2e-09
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
           C+ C   F +   L  H   HT EKPY+C +CG  FN   +LK H 
Sbjct: 20  CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 45.9 bits (110), Expect = 9e-07
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 12/63 (19%)

Query: 503 CPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTNE 558
           C  C  +F  K  L++H K +H       T    + C  C  +F     LK H R H+ E
Sbjct: 20  CDRCQASFRYKGNLASH-KTVH-------TGEKPYRCNICGAQFNRPANLKTHTRIHSGE 71

Query: 559 KPY 561
           KPY
Sbjct: 72  KPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 44.4 bits (106), Expect = 3e-06
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 547 YLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
           +   H     ++KPYKC  C   F +  +L +HK
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHK 37

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 69.8 bits (172), Expect = 5e-15
 Identities = 18/51 (35%), Positives = 21/51 (41%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                CE C K F    +L RH   H+ EKPY C  CG  F     +  H 
Sbjct: 5   SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHV 55

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 55.6 bits (135), Expect = 5e-10
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
             CE C K F  + +L RH  +H+ EKPY C VCGL F     +  H 
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHV 55

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 55.6 bits (135), Expect = 5e-10
 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 15/87 (17%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTN 557
            C  C K F     L+ H K  H       +    + C  C   F     +  H+R+H  
Sbjct: 9   ACEICGKIFRDVYHLNRH-KLSH-------SGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60

Query: 558 E--KPYKC-VCGLGFNFNVSLKNHKQK 581
              KPY C  CG GF+    L  H ++
Sbjct: 61  SVGKPYICQSCGKGFSRPDHLNGHIKQ 87

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 43.6 bits (104), Expect = 9e-06
 Identities = 27/139 (19%), Positives = 38/139 (27%), Gaps = 57/139 (41%)

Query: 392 HTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHG---YEVSNLCY 448
            +      C+ CG  F     L  HK S                  H G   Y     C 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLS------------------HSGEKPYS----CP 39

Query: 449 ICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFL---QCPH 505
           +CG    ++  +++H            +                   H G       C  
Sbjct: 40  VCGLRFKRKDRMSYH-----------VRS------------------HDGSVGKPYICQS 70

Query: 506 CPKTFPRKTELSNHIKGIH 524
           C K F R   L+ HIK +H
Sbjct: 71  CGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 40.6 bits (96), Expect = 9e-05
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHM-RTHTNEK 559
            CP C   F RK  +S H++  H    + + ++C+ C K F+   +L  H+ + H+   
Sbjct: 37  SCPVCGLRFKRKDRMSYHVR-SHDG-SVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 70.0 bits (172), Expect = 6e-15
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 8/84 (9%)

Query: 338 HVC--PHCGKKFTRKAELQLHIKGIHLKHQLEKTYIC--EYCHKEFTFYNYLRRHMRVHT 393
           H C  P C K +T+ + L+ H++     H  EK Y C  E C   F   + L RH R HT
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHLR----THTGEKPYKCTWEGCDWRFARSDELTRHYRKHT 71

Query: 394 NEKPYKCKDCGAAFNHNVSLKNHK 417
             KP++C  C  +F+ +  L  H 
Sbjct: 72  GAKPFQCGVCNRSFSRSDHLALHM 95

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 53.8 bits (130), Expect = 3e-09
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVC--EYCNKEFTFLQYLKRHMRTHTNEK 559
             P C K + + + L  H++     H   + + C  E C+  F     L RH R HT  K
Sbjct: 19  DYPGCTKVYTKSSHLKAHLR----THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAK 74

Query: 560 PYKC-VCGLGFNFNVSLKNHK 579
           P++C VC   F+ +  L  H 
Sbjct: 75  PFQCGVCNRSFSRSDHLALHM 95

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 52.6 bits (127), Expect = 6e-09
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 8/74 (10%)

Query: 324 HLAIHKKHSHSGQY-HVC--PHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFT 380
           HL  H   +H+G+  + C    C  +F R  EL  H +    KH   K + C  C++ F+
Sbjct: 32  HLKAHL-RTHTGEKPYKCTWEGCDWRFARSDELTRHYR----KHTGAKPFQCGVCNRSFS 86

Query: 381 FYNYLRRHMRVHTN 394
             ++L  HM+ H N
Sbjct: 87  RSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 49.5 bits (119), Expect = 8e-08
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 5/57 (8%)

Query: 530 RQTFVCE--YCNKEFTFLQYLKRHMRTHTNEKPYKC---VCGLGFNFNVSLKNHKQK 581
           R+   C+   C K +T   +LK H+RTHT EKPYKC    C   F  +  L  H +K
Sbjct: 13  RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK 69

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 10/82 (12%)

Query: 482 CAEVYHINGHIKD---KHSG---FFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVC 535
           C +VY  + H+K     H+G   +      C   F R  EL+ H +    KH   + F C
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR----KHTGAKPFQC 78

Query: 536 EYCNKEFTFLQYLKRHMRTHTN 557
             CN+ F+   +L  HM+ H N
Sbjct: 79  GVCNRSFSRSDHLALHMKRHQN 100

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 69.1 bits (170), Expect = 7e-15
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)

Query: 333 HSGQY-HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYIC--EYCHKEFTFYNYLRRHM 389
            +  +      CGK +T+ + L+ H++     H  EK Y C  + C  +F   + L RH 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLR----THTGEKPYHCDWDGCGWKFARSDELTRHY 57

Query: 390 RVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           R HT  +P++C+ C  AF+ +  L  H 
Sbjct: 58  RKHTGHRPFQCQKCDRAFSRSDHLALHM 85

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 54.1 bits (131), Expect = 1e-09
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCK--DCGAAFNHNVSLKNHK 417
           K     T     C K +T  ++L+ H+R HT EKPY C    CG  F  +  L  H 
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 51.4 bits (124), Expect = 1e-08
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 495 KHSGFFL-QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVC--EYCNKEFTFLQYLKRH 551
           K +         C KT+ + + L  H++     H   + + C  + C  +F     L RH
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLR----THTGEKPYHCDWDGCGWKFARSDELTRH 56

Query: 552 MRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
            R HT  +P++C  C   F+ +  L  H 
Sbjct: 57  YRKHTGHRPFQCQKCDRAFSRSDHLALHM 85

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 47.5 bits (114), Expect = 3e-07
 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 526 KHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV---CGLGFNFNVSLKNHKQK 581
           K     T     C K +T   +LK H+RTHT EKPY C    CG  F  +  L  H +K
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 67.5 bits (166), Expect = 2e-14
 Identities = 28/54 (51%), Positives = 34/54 (62%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           H  EK Y C  C K F+  + L +H RVHT EKPYKC +CG AF+ N  L NH+
Sbjct: 9   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ 62

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 51.7 bits (125), Expect = 6e-09
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%)

Query: 340 CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPY 398
           C  CGK F+R + L  H       H  EK Y C  C K F+  + L  H R+HT+    
Sbjct: 17  CVECGKAFSRSSILVQH----QRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 51.3 bits (124), Expect = 1e-08
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 385 LRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 +H+ EKPY C +CG AF+ +  L  H+
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQ 34

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 48.2 bits (116), Expect = 1e-07
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
           + C  C K F+    L +H R HT EKPYKC  CG  F+ N  L NH+
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ 62

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 40.5 bits (96), Expect = 5e-05
 Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 12/64 (18%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTN 557
            C  C K F R + L  H + +H       T    + C  C K F+    L  H R HT+
Sbjct: 16  GCVECGKAFSRSSILVQHQR-VH-------TGEKPYKCLECGKAFSQNSGLINHQRIHTS 67

Query: 558 EKPY 561
               
Sbjct: 68  GPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 548 LKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
                  H+ EKPY CV CG  F+ +  L  H+
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQ 34

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 66.3 bits (163), Expect = 5e-14
 Identities = 22/51 (43%), Positives = 28/51 (54%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
            + Y C+ C K F+  + L +H R HT EKPYKC +CG AF     L  H 
Sbjct: 16  RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH 66

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 53.6 bits (130), Expect = 1e-09
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 8/78 (10%)

Query: 324 HLAIHKKHSHSGQ--YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTF 381
                +      +  Y  C  CGK F+  ++L  H       H  EK Y C+ C K F  
Sbjct: 5   SSGRSEWQ-QRERRRYK-CDECGKSFSHSSDLSKH----RRTHTGEKPYKCDECGKAFIQ 58

Query: 382 YNYLRRHMRVHTNEKPYK 399
            ++L  H RVHT   P  
Sbjct: 59  RSHLIGHHRVHTGSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 53.6 bits (130), Expect = 2e-09
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 385 LRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
             R        + YKC +CG +F+H+  L  H+
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHR 38

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 48.2 bits (116), Expect = 1e-07
 Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
           C+ C K F+    L +H RTHT EKPYKC  CG  F     L  H 
Sbjct: 21  CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH 66

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.0 bits (100), Expect = 2e-05
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 12/65 (18%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTN 557
           +C  C K+F   ++LS H +  H       T    + C+ C K F    +L  H R HT 
Sbjct: 20  KCDECGKSFSHSSDLSKH-RRTH-------TGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

Query: 558 EKPYK 562
             P  
Sbjct: 72  SGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.3 bits (98), Expect = 3e-05
 Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 1/33 (3%)

Query: 548 LKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
             R        + YKC  CG  F+ +  L  H+
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHR 38

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 67.9 bits (167), Expect = 5e-14
 Identities = 19/50 (38%), Positives = 25/50 (50%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                C  CHK+F    YL+ H R HT EKP++C  CG  +    +L  H
Sbjct: 5   SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH 54

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 62.1 bits (152), Expect = 5e-12
 Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 2/81 (2%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPY 561
           +CP C K + RK  L  H     M +   Q F C  C + F     L+ HM +HT E PY
Sbjct: 37  ECPKCGKCYFRKENLLEHEARNCM-NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPY 95

Query: 562 KCV-CGLGFNFNVSLKNHKQK 581
           KC  C   F     L++H  K
Sbjct: 96  KCSSCSQQFMQKKDLQSHMIK 116

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 56.4 bits (137), Expect = 6e-10
 Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 281 CYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHS--HSGQY- 337
           C  C     ++  LK H R   GE   K  E   C  C     +L  H+  +  +  +  
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGE---KPFECPKCGKCYFRKENLLEHEARNCMNRSEQV 66

Query: 338 HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHM-RVHTNEK 396
             C  C + F R+ EL+LH     + H  E  Y C  C ++F     L+ HM ++H+   
Sbjct: 67  FTCSVCQETFRRRMELRLH----MVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 53.7 bits (130), Expect = 5e-09
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMR---THTNE 558
           +CP C K F  K  L  H    + KH   + F C  C K +   + L  H      + +E
Sbjct: 9   ECPTCHKKFLSKYYLKVH----NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE 64

Query: 559 KPYKC-VCGLGFNFNVSLKNH 578
           + + C VC   F   + L+ H
Sbjct: 65  QVFTCSVCQETFRRRMELRLH 85

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 50.2 bits (121), Expect = 9e-08
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
             C  C+K+F    YLK H R HT EKP++C  CG  +    +L  H
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH 54

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 66.0 bits (162), Expect = 7e-14
 Identities = 14/52 (26%), Positives = 18/52 (34%), Gaps = 2/52 (3%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNE--KPYKCKDCGAAFNHNVSLKNH 416
           EK Y C  CH  FT    ++ H+     E    + C  C         L  H
Sbjct: 13  EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVH 64

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 61.8 bits (151), Expect = 2e-12
 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 324 HLAIHKKHSHSGQ--YHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTF 381
                 + +HSG+  Y  C  C  +FT+   +++HI       +    + C +C      
Sbjct: 2   SSGSSGR-THSGEKPYE-CYICHARFTQSGTMKMHIL-QK-HTENVAKFHCPHCDTVIAR 57

Query: 382 YNYLRRHMR-VHTNEKPY 398
            + L  H+R  H+   P 
Sbjct: 58  KSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.5 bits (145), Expect = 1e-11
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 13/69 (18%)

Query: 385 LRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKN------------SSCPKLYSYETYLK 432
                R H+ EKPY+C  C A F  + ++K H                C  + + ++ L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 433 -HLKTNHHG 440
            HL+  H  
Sbjct: 63  VHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 3/61 (4%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRT-HTNEKP 560
           +C  C   F +   +  HI       E    F C +C+        L  H+R  H+   P
Sbjct: 17  ECYICHARFTQSGTMKMHIL-QK-HTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP 74

Query: 561 Y 561
            
Sbjct: 75  S 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 3/52 (5%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNE--KPYKC-VCGLGFNFNVSLKNHKQK 581
           + C  C+  FT    +K H+     E    + C  C         L  H +K
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK 67

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 48.7 bits (117), Expect = 9e-08
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 548 LKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
                RTH+ EKPY+C +C   F  + ++K H 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHI 35

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 13/75 (17%)

Query: 293 TLKNHVRVEHGENQAKRKEKKICDICS---AEVVHLAIHKKHSHSGQY---HVCPHCGKK 346
           +  +  R   GE   +      C IC     +   + +H       +      CPHC   
Sbjct: 2   SSGSSGRTHSGEKPYE------CYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTV 54

Query: 347 FTRKAELQLHIKGIH 361
             RK++L +H++  H
Sbjct: 55  IARKSDLGVHLRKQH 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 65.6 bits (161), Expect = 7e-14
 Identities = 13/55 (23%), Positives = 19/55 (34%)

Query: 363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                    C  C    +    LR H R+H  ++P+KC  C        +L  H 
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM 57

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 54.4 bits (132), Expect = 8e-10
 Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 340 CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYK 399
           C  C    + KA L++H +     H  ++ + C YC  +    + L +HM+    +    
Sbjct: 12  CSECSYSCSSKAALRIHER----IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP 67

Query: 400 C 400
            
Sbjct: 68  S 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 51.7 bits (125), Expect = 7e-09
 Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHKQK 581
           C  C+   +    L+ H R H  ++P+KC  C        +L  H +K
Sbjct: 12  CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 12/65 (18%)

Query: 503 CPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEYCNKEFTFLQYLKRHMRTHTNE 558
           C  C  +   K  L  H + IH            F C YC+ +      L +HM+    +
Sbjct: 12  CSECSYSCSSKAALRIHER-IH-------CTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63

Query: 559 KPYKC 563
                
Sbjct: 64  MSGPS 68

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 66.1 bits (161), Expect = 1e-13
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 5/68 (7%)

Query: 338 HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEY-----CHKEFTFYNYLRRHMRVH 392
                C + F+   EL  H+   H+    +  ++C +       K F     L  H+RVH
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 393 TNEKPYKC 400
           T EK    
Sbjct: 86  TGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 64.2 bits (156), Expect = 5e-13
 Identities = 18/67 (26%), Positives = 24/67 (35%), Gaps = 5/67 (7%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEY-----CNKEFTFLQYLKRHMRTHT 556
               C +TF    EL  H+   H+    +   VC +       K F     L  H+R HT
Sbjct: 27  PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86

Query: 557 NEKPYKC 563
            EK    
Sbjct: 87  GEKSGPS 93

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 64.0 bits (157), Expect = 2e-13
 Identities = 21/50 (42%), Positives = 28/50 (56%)

Query: 368 KTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           ++++CE C + F    +L+RH R HTNEKPY C  C  AF     L  H 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 58.7 bits (143), Expect = 2e-11
 Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHKQK 581
           FVCE C + F   ++LKRH R+HTNEKPY C +C   F     L  H QK
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 64.3 bits (157), Expect = 3e-13
 Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 1/66 (1%)

Query: 338 HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKP 397
             C  CG    +KA L  H +  H +      + CE+C K F   + +  H         
Sbjct: 8   LQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66

Query: 398 YKCKDC 403
              ++ 
Sbjct: 67  LAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 61.3 bits (149), Expect = 4e-12
 Identities = 13/54 (24%), Positives = 17/54 (31%), Gaps = 3/54 (5%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTN---EKPYKCKDCGAAFNHNVSLKNHK 417
                CE C         L  H R H        + C+ CG  F    S+  H+
Sbjct: 5   SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHR 58

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 57.8 bits (140), Expect = 6e-11
 Identities = 17/68 (25%), Positives = 23/68 (33%), Gaps = 1/68 (1%)

Query: 501 LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP 560
           LQC  C  T  +K  L+ H +  H +      F CE+C K F     +  H         
Sbjct: 8   LQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66

Query: 561 YKCVCGLG 568
                  G
Sbjct: 67  LAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 55.9 bits (135), Expect = 3e-10
 Identities = 14/53 (26%), Positives = 17/53 (32%), Gaps = 4/53 (7%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTN---EKPYKC-VCGLGFNFNVSLKNHKQK 581
             CE C         L  H R H        + C  CG  F    S+  H+ K
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 10/73 (13%), Positives = 19/73 (26%), Gaps = 13/73 (17%)

Query: 392 HTNEKPYKCKDCGAAFNHNVSLKNHKN-------------SSCPKLYSYETYLKHLKTNH 438
            +     +C+ CG       SL  H+                C K +     +   ++  
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 439 HGYEVSNLCYICG 451
           H   +       G
Sbjct: 62  HPALLLAPQESSG 74

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 61.5 bits (150), Expect = 3e-12
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 6/79 (7%)

Query: 340 CPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEY--CHKEFTFYNYLRRHMRVHTNEKP 397
             +CGK F +  +L++H       H  +  Y C +  C K F+  + L+RH +VH     
Sbjct: 6   FENCGKAFKKHNQLKVHQF----SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 398 YKCKDCGAAFNHNVSLKNH 416
            K   C            H
Sbjct: 62  KKDDSCSFVGKTWTLYLKH 80

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 533 FVCEY--CNKEFTFLQYLKRHMRTHTNEKPYKC---VCGLGFNFNVSLKNHK 579
           +VC +  C K F     LK H  +HT + PY+C    C   F+    LK H+
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE 53

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 46.8 bits (112), Expect = 6e-07
 Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 15/87 (17%)

Query: 503 CPHCPKTFPRKTELSNHIKGIHMKHELRQT----FVCEY--CNKEFTFLQYLKRHMRTHT 556
             +C K F +  +L  H    H       T    + C +  C+K F+    LKRH + H 
Sbjct: 6   FENCGKAFKKHNQLKVHQF-SH-------TQQLPYECPHEGCDKRFSLPSRLKRHEKVHA 57

Query: 557 NEKPYKC-VCGLGFNFNVSLKNHKQKC 582
                K   C            H  +C
Sbjct: 58  GYPCKKDDSCSFVGKTWTLYLKHVAEC 84

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 9/73 (12%)

Query: 324 HLAIHKKHSHSGQY-HVCPH--CGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEF- 379
            L +H+  SH+ Q  + CPH  C K+F+  + L+ H K     H        + C     
Sbjct: 18  QLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEK----VHAGYPCKKDDSCSFVGK 72

Query: 380 TFYNYLRRHMRVH 392
           T+  YL+     H
Sbjct: 73  TWTLYLKHVAECH 85

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 59.1 bits (144), Expect = 9e-12
 Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHM-RVHTNEKPYKCKDCGAAFN 408
             + K YIC+ C K F+  ++L  H+ +VHT+E+P+KC+   +  +
Sbjct: 7   GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 533 FVCEYCNKEFTFLQYLKRHM-RTHTNEKPYKC-VCGLGFN 570
           ++C+ C K F+   +L  H+ + HT+E+P+KC V   G +
Sbjct: 13  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                +  KPY C+ CG  F+    L  H
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGH 31

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNHKQK 581
              + +  KPY C  CG GF+    L  H ++
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQ 34

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 57.5 bits (138), Expect = 2e-10
 Identities = 16/94 (17%), Positives = 25/94 (26%), Gaps = 1/94 (1%)

Query: 324 HLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIK-GIHLKHQLEKTYICEYCHKEFTFY 382
              ++           C  C   +    EL +H+    H +    +T             
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 383 NYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
             L         +K  KC  CG +F     L  H
Sbjct: 66  RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 49.8 bits (118), Expect = 9e-08
 Identities = 23/148 (15%), Positives = 45/148 (30%), Gaps = 43/148 (29%)

Query: 385 LRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVS 444
            + +  + T    ++CKDC AA++  V L  H N +            H +        +
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNET-----------GHYR---DDNHET 52

Query: 445 NLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCP 504
           +      +   ++ +L          ++                            L+C 
Sbjct: 53  DNNNPKRWSKPRKRSLLEMEGKEDAQKV----------------------------LKCM 84

Query: 505 HCPKTFPRKTELSNH-IKGIHMKHELRQ 531
           +C  +F    +LS H IK  H +     
Sbjct: 85  YCGHSFESLQDLSVHMIKTKHYQKVSGP 112

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 48.6 bits (115), Expect = 3e-07
 Identities = 17/83 (20%), Positives = 26/83 (31%), Gaps = 2/83 (2%)

Query: 501 LQCPHCPKTFPRKTELSNHIK-GIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEK 559
            +C  C   +    EL+ H+    H + +  +T             + L         +K
Sbjct: 20  FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79

Query: 560 PYKC-VCGLGFNFNVSLKNHKQK 581
             KC  CG  F     L  H  K
Sbjct: 80  VLKCMYCGHSFESLQDLSVHMIK 102

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.4 bits (91), Expect = 5e-04
 Identities = 19/115 (16%), Positives = 32/115 (27%), Gaps = 12/115 (10%)

Query: 291 RSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQY--HVCPHCGKKFT 348
            S+ K +  +  G ++ +      C  CSA    L     H +   +             
Sbjct: 4   GSSGKLYGSIFTGASKFR------CKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNP 57

Query: 349 RKAELQLHIKGI--HLKHQLEKTYICEYCHKEFTFYNYLRRHM--RVHTNEKPYK 399
           ++         +    K   +K   C YC   F     L  HM    H  +    
Sbjct: 58  KRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.6 bits (151), Expect = 3e-10
 Identities = 74/534 (13%), Positives = 147/534 (27%), Gaps = 142/534 (26%)

Query: 9   LDDHVGKPSR----RRSLGV-----ESSVPKLKIKTETDDKSWEDKSLLEPEIKIKVEQG 59
           +D  +          R         E  V K   +    +  +    L+ P   IK EQ 
Sbjct: 51  IDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF----LMSP---IKTEQR 103

Query: 60  QATTSDETEEDDNTRQTSFKT--IISKYVGYNIDDLNTIDKRAKRTARAAS-------SG 110
           Q   S  T      R   +    + +KY    +     + ++A    R A         G
Sbjct: 104 Q--PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL-RQALLELRPAKNVLIDGVLG 160

Query: 111 SDTPKKRRGRS---RSKGRDAPVSRKRNRRAK--TPSQEETDAKILQQQKNLEKKIKKM- 164
           S       G++           V  K + +          +   +L+  + L  +I    
Sbjct: 161 S-------GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213

Query: 165 ----------------AKEERRRKIDLDKKPSD---MDNV--------F----------- 186
                            + E RR +      +    + NV        F           
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR 273

Query: 187 -ASL-DEMSSEEEEEEDWDEIHLGQFSPYEFKCRVCDWKLNSYDKLLRHMDWDEVHLGQF 244
              + D +S+        D   +   +P E K  +  + L+   + L      EV     
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMT-LTPDEVKSLLLKY-LDCRPQDLPR----EVLTT-- 325

Query: 245 SPY----------EFKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTL 294
           +P           +      +WK  + DKL   I+S            +   +    S  
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS---LNVLEPAEYRKMF-DRLSVF 381

Query: 295 KNHVRVEHG------ENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQY--HVCPHCGKK 346
                +          +  K     + +    ++   ++ +K             +   K
Sbjct: 382 PPSAHIPTILLSLIWFDVIKSDVMVVVN----KLHKYSLVEKQPKESTISIPSI-YLELK 436

Query: 347 FTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFT---FYNYLRRHMRVHTNEKPY----- 398
              + E  LH   +   + + KT+  +     +    FY+++  H++   + +       
Sbjct: 437 VKLENEYALHRSIVD-HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRM 495

Query: 399 ----------KCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYE 442
                     K +    A+N + S+ N        L   + Y  ++  N   YE
Sbjct: 496 VFLDFRFLEQKIRHDSTAWNASGSILN-------TLQQLKFYKPYICDNDPKYE 542

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 55.3 bits (134), Expect = 3e-10
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 338 HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHT 393
           + C  C + +T  +    H    H   +  K Y C +C KEFT  + +  H+++  
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSH--KRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 3/50 (6%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRT--HTNEKPYKC-VCGLGFNFNVSLKNHK 579
           + C+ C++ +T +    RH  T    N K Y C  C   F    ++  H 
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 502 QCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHT 556
           +C  C + +   +    H    H      + + C +C KEFT    +  H++   
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSH--KRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 46.4 bits (111), Expect = 4e-07
 Identities = 13/64 (20%), Positives = 22/64 (34%), Gaps = 14/64 (21%)

Query: 390 RVHTNEKPYKCKDCGAAFNHNVSLKNHKNSS------------CPKLYSYETYLK-HLKT 436
                E  Y+CK C   + H  +   H  +S            C K ++ +  +  H+K 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 437 NHHG 440
             H 
Sbjct: 63  -IHK 65

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T EKPY C++CG AF H+  L+ H+
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQ 32

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y CE C K F   + L+ H R+HT EKP   
Sbjct: 7   GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 14/32 (43%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           CE C K F     L+ H R HT EKP     G
Sbjct: 15  CEECGKAFIHDSQLQEHQRIHTGEKPSGPSSG 46

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
               + T EKPY C  CG  F  +  L+ H+
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQ 32

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 2e-09
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T  KPY C +CG AF+   SL  H+
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQ 32

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 9e-08
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
               K Y+C  C K F+ Y+ L  H  +HT EKP   
Sbjct: 7   GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
               + T  KPY C  CG  F+   SL  H+
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQ 32

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 12/32 (37%), Positives = 13/32 (40%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F+    L  H   HT EKP     G
Sbjct: 15  CNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG 46

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 52.3 bits (126), Expect = 4e-09
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)

Query: 367 EKTYIC--EYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
            + Y C  E C + F+  + L RH+R+HT +KP++C+ C   F+ +  L  H 
Sbjct: 17  MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 48.8 bits (117), Expect = 7e-08
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 5/66 (7%)

Query: 517 SNHIKGIHMKHELRQTFVC--EYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNV 573
            N++    +     + + C  E C++ F+    L RH+R HT +KP++C +C   F+ + 
Sbjct: 6   MNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 63

Query: 574 SLKNHK 579
            L  H 
Sbjct: 64  HLTTHI 69

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 7/68 (10%)

Query: 329 KKHSHSGQY-HVCPH--CGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYL 385
             +       + CP   C ++F+R  EL  HI+     H  +K + C  C + F+  ++L
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRHIR----IHTGQKPFQCRICMRNFSRSDHL 65

Query: 386 RRHMRVHT 393
             H+R HT
Sbjct: 66  TTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 43.4 bits (103), Expect = 6e-06
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)

Query: 504 PHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHT 556
             C + F R  EL+ HI+     H  ++ F C  C + F+   +L  H+RTHT
Sbjct: 25  ESCDRRFSRSDELTRHIR----IHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 4e-09
 Identities = 14/31 (45%), Positives = 16/31 (51%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T EKPYKC +CG  F HN  L  H+
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQ 32

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 17/37 (45%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K F   +YL RH R+HT EKP   
Sbjct: 7   GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 15/32 (46%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F    YL RH R HT EKP     G
Sbjct: 15  CNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG 46

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 4e-05
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
               + T EKPYKC  CG  F  N  L  H+
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQ 32

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 5e-09
 Identities = 14/31 (45%), Positives = 17/31 (54%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T EKPY+C  CG AF+H  SL  H+
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQ 32

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 8e-07
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K F+    L  H R+H+ +KP   
Sbjct: 7   GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F+  Q L  H R H+ +KP     G
Sbjct: 15  CSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG 46

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
               + T EKPY+C VCG  F+   SL  H+
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQ 32

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T EKPY+C  C  AF+H+ SL  H+
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQ 32

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 359 GIHLK-HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
           G        EK Y C+ C K F+ +  L +H RVH+ EKP   
Sbjct: 1   GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C+ C K F+    L +H R H+ EKP     G
Sbjct: 15  CDVCRKAFSHHASLTQHQRVHSGEKPSGPSSG 46

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
              + T EKPY+C VC   F+ + SL  H+
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQ 32

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 7e-09
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 + EKP+KC++CG  F  N  L +H+
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQ 32

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 17/37 (45%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK + CE C K FT  + L  H RVHT EKP   
Sbjct: 7   GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 15/32 (46%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           CE C K FT    L  H R HT EKP     G
Sbjct: 15  CEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG 46

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 4e-05
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
               + + EKP+KC  CG  F  N  L +H+
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQ 32

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 8e-09
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 + EKPYKC +CG  F  N  L NH 
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHW 32

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 3e-07
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K FT  ++L  H R+HT EKP   
Sbjct: 7   GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 14/32 (43%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K FT   +L  H R HT EKP     G
Sbjct: 15  CNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG 46

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 7e-05
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
               + + EKPYKC  CG  F  N  L NH 
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHW 32

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 50.6 bits (122), Expect = 8e-09
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EKT+ C  C   F+  + LR H  VH  EKP   
Sbjct: 7   GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                  EK +KC++C   F+   SL+ H+
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQ 32

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C+  F+    L+ H   H  EKP     G
Sbjct: 15  CRECDMCFSQASSLRLHQNVHVGEKPSGPSSG 46

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
              +   EK +KC  C + F+   SL+ H+
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQ 32

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 8e-09
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T EKPYKC +CG AF+    L  H+
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQ 32

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K F+  + L RH R+HT EKP   
Sbjct: 7   GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 14/32 (43%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F+    L RH R HT EKP     G
Sbjct: 15  CNECGKAFSQTSKLARHQRIHTGEKPSGPSSG 46

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
               + T EKPYKC  CG  F+    L  H+
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQ 32

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 50.6 bits (122), Expect = 9e-09
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T EKPY CK+CG +F     L  H+
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQ 32

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKD 402
              EK Y C+ C K F + + L +H RVH+ EKP     
Sbjct: 7   GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKC 563
           C+ C K F +   L +H R H+ EKP   
Sbjct: 15  CKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 39.5 bits (93), Expect = 8e-05
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
               + T EKPY C  CG  F +   L  H+
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQ 32

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 + EKPYKC +CG AF+ +  L  H+
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHR 32

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K F  + +L  H R+HT  +P   
Sbjct: 7   GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 5e-05
 Identities = 10/29 (34%), Positives = 12/29 (41%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKC 563
           C  C K F    +L  H R HT  +P   
Sbjct: 15  CSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
               + + EKPYKC  CG  F+ +  L  H+
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHR 32

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T EKPYKC +CG AF  + +L  H+
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQ 32

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K F  ++ L  H  +HT EKP   
Sbjct: 7   GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 12/32 (37%), Positives = 12/32 (37%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F     L  H   HT EKP     G
Sbjct: 15  CNECGKAFRAHSNLTTHQVIHTGEKPSGPSSG 46

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 9e-05
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
              + T EKPYKC  CG  F  + +L  H+
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQ 32

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T EKPYKC +CG  F  N  L  H+
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQ 32

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 15/37 (40%), Positives = 18/37 (48%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K F   ++L RH  +HT EKP   
Sbjct: 7   GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F    +L RH   HT EKP     G
Sbjct: 15  CHECGKVFRRNSHLARHQLIHTGEKPSGPSSG 46

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 7e-05
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
               + T EKPYKC  CG  F  N  L  H+
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQ 32

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T EKPYKC  C  +F +  SL  H+
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQ 32

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 16/37 (43%), Positives = 20/37 (54%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C+ CHK F + + L  H R+HT EKP   
Sbjct: 7   GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C+ C+K F +   L  H R HT EKP     G
Sbjct: 15  CDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG 46

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 4e-05
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
              + T EKPYKC VC   F +  SL  H+
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQ 32

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T EK YKC +CG  F+ N  L  H+
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQ 32

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 45.2 bits (108), Expect = 7e-07
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K F+  + L +H ++HT EKP   
Sbjct: 7   GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 40.2 bits (95), Expect = 4e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F+    L +H + HT EKP     G
Sbjct: 15  CNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG 46

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 39.0 bits (92), Expect = 9e-05
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
               + T EK YKC  CG  F+ N  L  H+
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQ 32

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 51.2 bits (123), Expect = 1e-08
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 4/66 (6%)

Query: 356 HIKGIHLKHQLEKTYICEY--CHKEFTFYNYLRRHMRVHTNEKPYKC--KDCGAAFNHNV 411
              G  +     +++IC +  C K +   ++L+ H R HT EKP+ C  K C   F  + 
Sbjct: 4   GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63

Query: 412 SLKNHK 417
            L  H+
Sbjct: 64  ELSRHR 69

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 5/70 (7%)

Query: 517 SNHIKGIHMKHELRQTFVCEY--CNKEFTFLQYLKRHMRTHTNEKPYKCV---CGLGFNF 571
           S+   G  +     ++ +C +  C K +    +LK H RTHT EKP+ C    C   F  
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 572 NVSLKNHKQK 581
           +  L  H++ 
Sbjct: 62  SDELSRHRRT 71

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 43.5 bits (103), Expect = 5e-06
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 8/73 (10%)

Query: 324 HLAIHKKHSHSGQYHVCPH--CGKKFTRKAELQLHIKGIHLKHQLEKTYICEY--CHKEF 379
             +  +  S   + H+C H  CGK + + + L+ H +     H  EK + C +  C + F
Sbjct: 4   GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTR----THTGEKPFSCSWKGCERRF 59

Query: 380 TFYNYLRRHMRVH 392
              + L RH R H
Sbjct: 60  ARSDELSRHRRTH 72

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T EKP++C++CG +F+ N  L  H
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVH 31

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK + C  C K F+F + L  H R+HT E P   
Sbjct: 7   GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F+F   L  H R HT E P     G
Sbjct: 15  CRECGKSFSFNSQLIVHQRIHTGENPSGPSSG 46

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 9e-05
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
               + T EKP++C  CG  F+FN  L  H
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVH 31

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T EKP++C +CG +F+ +  L  H
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATH 31

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 46.3 bits (111), Expect = 3e-07
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK + C  C K F+  + L  H R+HT EKP   
Sbjct: 7   GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 42.1 bits (100), Expect = 8e-06
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F+    L  H R HT EKP     G
Sbjct: 15  CAECGKSFSISSQLATHQRIHTGEKPSGPSSG 46

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
               + T EKP++C  CG  F+ +  L  H
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATH 31

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T EKP+ C DCG AF+ ++ L  H+
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHR 32

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK + C  C K F+ +  L +H R+HT EKP   
Sbjct: 7   GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           F C  C K F+    L +H R HT EKP     G
Sbjct: 13  FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG 46

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
              + T EKP+ C+ CG  F+ ++ L  H+
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHR 32

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T EKPYKC+ CG AF  +  L  H 
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHH 32

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C+ C K F   ++L +H  VH+ E+P   
Sbjct: 7   GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C+ C K F    +L +H   H+ E+P     G
Sbjct: 15  CQVCGKAFRVSSHLVQHHSVHSGERPSGPSSG 46

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
               + T EKPYKC VCG  F  +  L  H 
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHH 32

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 + EKP+KCK+CG AF  N+ L +H 
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHL 32

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK + C+ C K F    +L  H+R+HT EKP   
Sbjct: 7   GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 9e-06
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           F C+ C K F    +L  H+R HT EKP     G
Sbjct: 13  FKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG 46

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
               + + EKP+KC  CG  F  N+ L +H 
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHL 32

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T EKPYKC +CG AF  N S   H+
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQ 32

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.3 bits (108), Expect = 6e-07
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K F   +   +H R+HT ++P   
Sbjct: 7   GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F       +H R HT ++P     G
Sbjct: 15  CMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG 46

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
              + T EKPYKC+ CG  F  N S   H+
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQ 32

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T EKPY+C  CG AF+   SL  H+
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQ 32

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCK 401
              EK Y C  C K F+  + L  H  +HT +KP    
Sbjct: 7   GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 11/32 (34%), Positives = 13/32 (40%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F+    L  H   HT +KP     G
Sbjct: 15  CNQCGKAFSVRSSLTTHQAIHTGKKPSGPSSG 46

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
               + T EKPY+C  CG  F+   SL  H+
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQ 32

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T EKP+KC  CG +F     L  H 
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHS 32

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCG 404
              EK + C+ C K F   + L RH  VHT EKP      G
Sbjct: 7   GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP-SSG 46

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 14/34 (41%), Positives = 15/34 (44%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           F C+ C K F     L RH   HT EKP     G
Sbjct: 13  FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG 46

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 4e-05
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
              + T EKP+KC +CG  F     L  H 
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHS 32

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 + EKPY C  CG AF  +  L  H+
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQ 32

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 17/37 (45%), Positives = 20/37 (54%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y+C+YC K F     L RH R+HT EKP   
Sbjct: 7   GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           +VC+YC K F     L RH R HT EKP     G
Sbjct: 13  YVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG 46

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
               + + EKPY C  CG  F  +  L  H+
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQ 32

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T EKPYKC+ CG  +N   +L  H+
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQ 32

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 359 GIHLK-HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
           G        EK Y CE C K +     L  H +VHT E+P   
Sbjct: 1   GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           CE C K +     L  H + HT E+P     G
Sbjct: 15  CEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG 46

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
              + T EKPYKC  CG G+N   +L  H+
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQ 32

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T EKPYKC +CG  F  N  L  H+
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHR 32

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K FT  ++L RH  +HT EKP   
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 14/32 (43%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K FT   +L RH   HT EKP     G
Sbjct: 15  CNECGKVFTQNSHLVRHRGIHTGEKPSGPSSG 46

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
               + T EKPYKC  CG  F  N  L  H+
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHR 32

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T EKPYKC++CG  F     L  H 
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHH 32

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 16/37 (43%), Positives = 16/37 (43%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y CE C K F     L  H  VHT EKP   
Sbjct: 7   GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 6e-06
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           CE C K F   + L  H   HT EKP     G
Sbjct: 15  CEECGKGFICRRDLYTHHMVHTGEKPSGPSSG 46

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
              + T EKPYKC  CG GF     L  H 
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHH 32

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 14/31 (45%), Positives = 16/31 (51%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T EKPYKC +CG AF    SL  H+
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQ 32

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 13/37 (35%), Positives = 15/37 (40%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K F   + L  H   H+ EKP   
Sbjct: 7   GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 8e-06
 Identities = 12/32 (37%), Positives = 13/32 (40%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F     L  H  TH+ EKP     G
Sbjct: 15  CNECGKAFRARSSLAIHQATHSGEKPSGPSSG 46

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
               + T EKPYKC  CG  F    SL  H+
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQ 32

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T EKPY+CK+CG AF+    L  H
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQH 31

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 16/37 (43%), Positives = 20/37 (54%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C+ C K F+   +L +H RVHT EKP   
Sbjct: 7   GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C+ C K F+   +L +H R HT EKP     G
Sbjct: 15  CKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG 46

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
               + T EKPY+C  CG  F+    L  H
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQH 31

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T E+PY C  CG AF    +L  H
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKH 31

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              E+ YIC  C K FT  + L +H ++HT EKP   
Sbjct: 7   GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           ++C  C K FT    L +H + HT EKP     G
Sbjct: 13  YICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG 46

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNH 578
               + T E+PY C VCG  F    +L  H
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKH 31

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           F C+ C   F++   L +H+R+H    P     G
Sbjct: 13  FQCKECGMNFSWSCSLFKHLRSHERTDPSGPSSG 46

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.4 bits (116), Expect = 5e-08
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
           EK + C+ C   F++   L +H+R H    P   
Sbjct: 10  EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.0 bits (115), Expect = 7e-08
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T EKP++CK+CG  F+ + SL  H 
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHL 32

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.3 bits (95), Expect = 4e-05
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
              + T EKP++C  CG+ F+++ SL  H 
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHL 32

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                + EKPYKC+DCG  +N  ++L  H+
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQ 32

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 14/37 (37%), Positives = 16/37 (43%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
             +EK Y CE C K +     L  H RVH  EK    
Sbjct: 7   GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 2e-05
 Identities = 11/32 (34%), Positives = 12/32 (37%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           CE C K +     L  H R H  EK      G
Sbjct: 15  CEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG 46

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 7e-05
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
              + + EKPYKC  CG G+N  ++L  H+
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQ 32

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 3e-08
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T EK Y CK+CG +F+    L  H+
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHE 32

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C+ C K F+    L +H R+H+ EKP   
Sbjct: 7   GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C+ C K F+    L +H R H+ EKP     G
Sbjct: 15  CKECGKSFSRAPCLLKHERLHSGEKPSGPSSG 46

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
              + T EK Y C  CG  F+    L  H+
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHE 32

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 3e-08
 Identities = 14/30 (46%), Positives = 14/30 (46%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T EKPYKC DCG AF     L  H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIH 31

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K FT  + L  H + HT E+    
Sbjct: 7   GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K FT    L  H ++HT E+      G
Sbjct: 15  CSDCGKAFTRKSGLHIHQQSHTGERHSGPSSG 46

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
               + T EKPYKC  CG  F     L  H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIH 31

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 3e-08
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T EKPY+C +CG AF    +L  H+
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQ 32

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 15/37 (40%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K F     L +H R+HT EKP   
Sbjct: 7   GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           + C  C K F     L +H R HT EKP     G
Sbjct: 13  YRCGECGKAFAQKANLTQHQRIHTGEKPSGPSSG 46

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
               + T EKPY+C  CG  F    +L  H+
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQ 32

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.1 bits (118), Expect = 3e-08
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 + EKPY+C +CG AF     L  H+
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHE 32

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 11/37 (29%), Positives = 13/37 (35%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K F + + L  H R H        
Sbjct: 7   GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 8e-05
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
               + + EKPY+C  CG  F +   L  H+
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHE 32

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 9/31 (29%), Positives = 11/31 (35%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC 563
           + C  C K F +   L  H RTH        
Sbjct: 13  YECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 3e-08
 Identities = 12/31 (38%), Positives = 13/31 (41%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T EKPY C  CG AF  +  L  H 
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHL 32

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCK 401
              EK Y C  C K F    +L +H+RVHT E      
Sbjct: 7   GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           + C  C K F    +L +H+R HT E       G
Sbjct: 13  YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSSG 46

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
               + T EKPY C VCG  F  +  L  H 
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHL 32

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 3e-08
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                T EKPY C +CG AF    +L  H
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKH 31

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK YIC  C K FT  + L +H ++HT +KP   
Sbjct: 7   GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 6e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           ++C  C K FT    L +H + HT +KP     G
Sbjct: 13  YICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG 46

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 1/29 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
              + T EKPY C  CG  F    +L  H
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKH 31

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 3e-08
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T EKP+KC +CG ++N  V L  H
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQH 31

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 9e-07
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK + C  C K +    +L +H RVHT EKP   
Sbjct: 7   GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 7e-05
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           F C  C K +    +L +H R HT EKP     G
Sbjct: 13  FKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG 46

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
               + T EKP+KC  CG  +N  V L  H
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQH 31

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 48.6 bits (117), Expect = 3e-08
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPY 561
           + CE C   F  LQ LK H+R HT   P 
Sbjct: 12  YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 48.6 bits (117), Expect = 3e-08
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                  EKPY C+ CG  F H  +LK+H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSH 30

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNEKPY 398
           EK Y CE C   F     L+ H+R+HT   P 
Sbjct: 9   EKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 40.9 bits (97), Expect = 2e-05
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNH 578
              +   EKPY C +CG  F    +LK+H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSH 30

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 3e-08
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                T EKPYKC DCG +F     L+ H
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIH 31

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K FT+ + LR H + HT E+    
Sbjct: 7   GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K FT+   L+ H + HT E+      G
Sbjct: 15  CSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG 46

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
              + T EKPYKC  CG  F +   L+ H
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIH 31

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 14/31 (45%), Positives = 16/31 (51%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T EKPYKC +CG  F  N  L NH+
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQ 32

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 15/37 (40%), Positives = 18/37 (48%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K FT  ++L  H R+HT  KP   
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K FT   +L  H R HT  KP     G
Sbjct: 15  CNECGKVFTQNSHLANHQRIHTGVKPSGPSSG 46

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
               + T EKPYKC  CG  F  N  L NH+
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQ 32

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                  EKPYKC+ CGA F     L+ H 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHV 31

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPY 398
              EK Y CE C   F    +LR H+ +HT   P 
Sbjct: 6   SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.8 bits (107), Expect = 9e-07
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPY 561
           CE C   F  + +L+ H+  HT   P 
Sbjct: 14  CETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
              +   EKPYKC  CG  F     L+ H 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHV 31

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                  +K +KC +C   F  + SL  H
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVH 31

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              +K + C  C K FT  + L  H R+HT EKP   
Sbjct: 7   GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 14/32 (43%), Positives = 14/32 (43%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K FT    L  H R HT EKP     G
Sbjct: 15  CNECKKTFTQSSSLTVHQRIHTGEKPSGPSSG 46

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 8/29 (27%), Positives = 12/29 (41%), Gaps = 1/29 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNH 578
              +   +K +KC  C   F  + SL  H
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVH 31

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T EKPY+C +CG AF    +L  H
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTH 31

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 15/37 (40%), Positives = 18/37 (48%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K FT  + L  H ++HT EKP   
Sbjct: 7   GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 9e-06
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           + C  C K FT    L  H + HT EKP     G
Sbjct: 13  YRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG 46

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
               + T EKPY+C  CG  F    +L  H
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTH 31

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T EKP+KC +CG  F+   +L  H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVH 31

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK + C  C K F+  + L  H ++HT EKP   
Sbjct: 7   GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           F C  C K F+    L  H + HT EKP     G
Sbjct: 13  FKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG 46

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 39.0 bits (92), Expect = 9e-05
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
               + T EKP+KCV CG GF+   +L  H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVH 31

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                  EK YKC  CG  F+ +  L+ H+
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQ 32

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 8e-08
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 359 GIHLK-HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
           G        EK Y C+ C KEF+  ++L+ H RVHT EKP   
Sbjct: 1   GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 6e-06
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C+ C KEF+   +L+ H R HT EKP     G
Sbjct: 15  CDVCGKEFSQSSHLQTHQRVHTGEKPSGPSSG 46

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 9e-05
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
              +   EK YKC VCG  F+ +  L+ H+
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQ 32

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T ++PY+C +CG AF    SL  H+
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHR 32

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 13/38 (34%), Positives = 16/38 (42%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCK 401
              ++ Y C  C K F   + L  H R HT EKP    
Sbjct: 7   GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F     L  H R+HT EKP     G
Sbjct: 15  CIECGKAFKTKSSLICHRRSHTGEKPSGPSSG 46

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
               + T ++PY+C+ CG  F    SL  H+
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHR 32

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 48.7 bits (117), Expect = 5e-08
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                T +KPY+C +CG AF  N SL  H
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRH 31

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMR-VHTNEKPYKC 400
              +K Y C  C K F     L RH R  HT EKP   
Sbjct: 7   GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
              + T +KPY+C+ CG  F  N SL  H
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRH 31

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.2 bits (87), Expect = 5e-04
 Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)

Query: 535 CEYCNKEFTFLQYLKRHMR-THTNEKPYKCVCG 566
           C  C K F     L RH R  HT EKP     G
Sbjct: 15  CIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG 47

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T E+P+KC +CG +F  +  L  H
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQH 31

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 7e-07
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              E+ + C  C K F    +L +H R+HT EKP   
Sbjct: 7   GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 13/32 (40%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F    +L +H R HT EKP     G
Sbjct: 15  CNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG 46

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
               + T E+P+KC  CG  F  +  L  H
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQH 31

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 13/37 (35%), Positives = 15/37 (40%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
                 Y C  C K F+    L  H R+HT EKP   
Sbjct: 7   GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 9e-07
 Identities = 8/29 (27%), Positives = 11/29 (37%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                    PYKC  C  +F+  + L  H
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVH 31

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F+    L  H R HT EKP     G
Sbjct: 15  CSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG 46

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 8/29 (27%), Positives = 11/29 (37%), Gaps = 1/29 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNH 578
              +     PYKC  C   F+  + L  H
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVH 31

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 + EKP++C++CG  F  N  L +H
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSH 31

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 17/37 (45%), Positives = 20/37 (54%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK + CE C K FT  ++L  H RVHT EKP   
Sbjct: 7   GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 16/34 (47%), Positives = 17/34 (50%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           F CE C K FT   +L  H R HT EKP     G
Sbjct: 13  FQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSSG 46

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
               + + EKP++C  CG  F  N  L +H
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSH 31

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 11/31 (35%), Positives = 12/31 (38%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 T  KPY C +CG AF     L  H 
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHT 32

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 13/37 (35%), Positives = 15/37 (40%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
               K Y+C  C K F   +YL  H R HT E     
Sbjct: 7   GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 9e-06
 Identities = 13/31 (41%), Positives = 14/31 (45%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC 563
           +VC  C K F    YL  H RTHT E     
Sbjct: 13  YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.2 bits (90), Expect = 2e-04
 Identities = 10/31 (32%), Positives = 11/31 (35%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
               + T  KPY C  CG  F     L  H 
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHT 32

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCK 401
              +K Y C+ C K F    +L +H RVHT E+     
Sbjct: 7   GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                 + +KPY+CK+C   F     L  HK
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHK 32

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKC 563
           C+ C K F  + +L +H R HT E+    
Sbjct: 15  CKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.2 bits (116), Expect = 6e-08
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T EKP++C +C  AFN   +L  H
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVH 31

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 3e-07
 Identities = 14/37 (37%), Positives = 16/37 (43%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK + C  C K F   + L  H R HT EKP   
Sbjct: 7   GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.2 bits (103), Expect = 3e-06
 Identities = 15/34 (44%), Positives = 15/34 (44%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           F C  C K F     L  H RTHT EKP     G
Sbjct: 13  FECSECQKAFNTKSNLIVHQRTHTGEKPSGPSSG 46

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 2e-04
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
               + T EKP++C  C   FN   +L  H
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVH 31

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T  KPY+C +CG AF+    L  H+
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQ 32

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 359 GIHLK-HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
           G         K Y C  C K F+  + L RH RVHT EKP   
Sbjct: 1   GSSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 14/32 (43%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F+    L RH R HT EKP     G
Sbjct: 15  CNECGKAFSQTSKLARHQRVHTGEKPSGPSSG 46

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                  EKPY+C +CG +F+ +  L  H 
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHW 32

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
            + EK Y C  C K F+    L +H   HT EKP   
Sbjct: 7   GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 13/32 (40%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F+    L +H  THT EKP     G
Sbjct: 15  CSECGKSFSGSYRLTQHWITHTREKPSGPSSG 46

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
              +   EKPY+C  CG  F+ +  L  H 
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHW 32

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                + EKP+KC++CG  F  N    +H
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSH 31

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCG 404
              EK + CE C K F   +    H R H+ EKP      G
Sbjct: 7   GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP-SSG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           F CE C K F        H R+H+ EKP     G
Sbjct: 13  FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 9e-05
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
              + + EKP+KC  CG GF  N    +H
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSH 31

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T EKPY+C  CG +F     L  H
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVH 31

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 15/38 (39%), Positives = 18/38 (47%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCK 401
              EK Y C  C K FT  + L  H ++HT EKP    
Sbjct: 7   GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K FT    L  H + HT EKP     G
Sbjct: 15  CSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG 46

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNH 578
               + T EKPY+C +CG  F     L  H
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVH 31

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 8e-08
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T +KPYKC +CG  F  N  L  H+
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHR 32

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              +K Y C  C K FT  ++L RH  +HT EKP   
Sbjct: 7   GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 9e-06
 Identities = 14/32 (43%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K FT   +L RH   HT EKP     G
Sbjct: 15  CNECGKVFTQNSHLARHRGIHTGEKPSGPSSG 46

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
              + T +KPYKC  CG  F  N  L  H+
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHR 32

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.6 bits (114), Expect = 8e-08
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                  EKPY+C  CG AF+   SL  H 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHI 31

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPY 398
              EK Y C+ C K F+    L  H+RVHT   P 
Sbjct: 6   SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.2 bits (87), Expect = 5e-04
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
              +   EKPY+C  CG  F+   SL  H 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHI 31

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 9e-08
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 359 GIHLK-HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
           G        EK Y C  C K F+  + L  H R HT EKP   
Sbjct: 1   GSSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                + EKPY C +CG  F+    L  H+
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQ 32

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 13/29 (44%), Positives = 14/29 (48%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKC 563
           C  C K F+    L  H RTHT EKP   
Sbjct: 15  CNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
              + + EKPY C  CG  F+    L  H+
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQ 32

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 9e-08
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                + EKPYKC +CG  +   + L  H
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFH 31

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 14/37 (37%), Positives = 15/37 (40%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K +     L  H RVHT EK    
Sbjct: 7   GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 11/32 (34%), Positives = 12/32 (37%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K +     L  H R HT EK      G
Sbjct: 15  CVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG 46

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
              + + EKPYKCV CG G+   + L  H
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFH 31

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 9e-08
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              E+ + C  C K F   ++L  H+R+H+ EK    
Sbjct: 7   GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 + E+P+KC +CG  F     L  H
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGH 31

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           F C  C K F    +L  H+R H+ EK      G
Sbjct: 13  FKCNECGKGFGRRSHLAGHLRLHSREKSSGPSSG 46

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNH 578
               + + E+P+KC  CG GF     L  H
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGH 31

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 9e-08
 Identities = 12/30 (40%), Positives = 13/30 (43%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T EKPY+CK C  AF     L  H
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQH 31

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 8e-07
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCK 401
              EK Y C+ C K FT   +L +H + HT EKP    
Sbjct: 7   GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 4e-05
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C+ C+K FT   +L +H +THT EKP     G
Sbjct: 15  CKVCSKAFTQKAHLAQHQKTHTGEKPSGPSSG 46

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNH 578
               + T EKPY+C VC   F     L  H
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQH 31

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 48.5 bits (115), Expect = 1e-07
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 385 LRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPK 423
             +  ++H  ++  KC  CG  F    +L   K   C K
Sbjct: 6   SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKTPMCEK 44

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.0 bits (98), Expect = 2e-05
 Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 11/75 (14%)

Query: 324 HLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYN 383
                +K     +   C  CG  F R++                KT +CE C K+     
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRST-----------LSRRKTPMCEKCRKDSCQEA 53

Query: 384 YLRRHMRVHTNEKPY 398
            L +     + +K  
Sbjct: 54  ALNKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 8/54 (14%), Positives = 15/54 (27%), Gaps = 7/54 (12%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           H  +++  C  C   F             +  K   C+ C        +L   +
Sbjct: 13  HLGDRSQKCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSCQEAALNKDE 59

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                T E P+ C +CG  F H  +L  H
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIH 31

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              E  +IC  C K FT    L  H ++HT E+P   
Sbjct: 7   GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 9e-06
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           F+C  C K FT    L  H + HT E+P     G
Sbjct: 13  FICSECGKVFTHKTNLIIHQKIHTGERPSGPSSG 46

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 9/29 (31%), Positives = 12/29 (41%), Gaps = 1/29 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
              + T E P+ C  CG  F    +L  H
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIH 31

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T  K ++C +CG AF    +L  H
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMH 31

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 7e-07
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
               K + C  C K FT  + L  H ++HT EKP   
Sbjct: 7   GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 14/34 (41%), Positives = 15/34 (44%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           F C  C K FT    L  H + HT EKP     G
Sbjct: 13  FECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG 46

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                T EKPY+C DCG +F     L  H
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVH 31

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 14/37 (37%), Positives = 16/37 (43%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K F   + L  H R+HT E P   
Sbjct: 7   GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 12/32 (37%), Positives = 12/32 (37%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F     L  H R HT E P     G
Sbjct: 15  CSDCGKSFIKKSQLHVHQRIHTGENPSGPSSG 46

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T E+ Y+C +CG AF    +L  H
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMH 31

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 9e-07
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              E+ Y C  C K F   + L  H R+HT EKP   
Sbjct: 7   GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 2e-05
 Identities = 13/34 (38%), Positives = 14/34 (41%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           + C  C K F     L  H R HT EKP     G
Sbjct: 13  YECSECGKAFARKSTLIMHQRIHTGEKPSGPSSG 46

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK + C  C K F+  +YL  H + H  EKP   
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           F C  C K F+   YL  H +TH  EKP     G
Sbjct: 11  FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG 44

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.4 bits (93), Expect = 7e-05
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 390 RVHTNEKPYKCKDCGAAFNHNVSLKNH 416
              + EKP+ C  C  AF+    L  H
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVH 29

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              E+ Y C  C K F  +++L  H++ H  EK    
Sbjct: 7   GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                + E+PY C +CG  F  +  L  H 
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHL 32

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           + C  C K F    +L  H++ H  EK      G
Sbjct: 13  YGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 47.2 bits (112), Expect = 1e-07
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC 403
             +  K   CE C K F    +L RH   H+ EKPY     
Sbjct: 6   SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 47.2 bits (112), Expect = 1e-07
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 526 KHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC 563
               R+   CE C K F  + +L RH  +H+ EKPY  
Sbjct: 6   SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 13/30 (43%), Positives = 15/30 (50%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T EKPYKC +CG  F  N  L  H+
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHR 32

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K FT  ++L RH  +HT EKP   
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 14/32 (43%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K FT   +L RH   HT EKP     G
Sbjct: 15  CNECGKVFTQNSHLARHRGIHTGEKPSGPSSG 46

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 9e-04
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
              + T EKPYKC  CG  F  N  L  H+
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHR 32

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K F+  +YL  HMR H+ EKP   
Sbjct: 7   GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 11/31 (35%), Positives = 13/31 (41%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                   EKPY C +CG AF+    L  H 
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHM 32

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           + C  C K F+   YL  HMRTH+ EKP     G
Sbjct: 13  YGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG 46

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 10/31 (32%), Positives = 12/31 (38%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
               +   EKPY C  CG  F+    L  H 
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHM 32

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T E PY+C +CG AF+    L +H
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISH 31

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 13/37 (35%), Positives = 14/37 (37%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              E  Y C  C K F+    L  H R H  EKP   
Sbjct: 7   GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F+    L  H RTH  EKP     G
Sbjct: 15  CHECGKAFSRKYQLISHQRTHAGEKPSGPSSG 46

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T EKPY+C +C  AFN   +L  H+
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQ 32

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.9 bits (110), Expect = 3e-07
 Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)

Query: 359 GIHLK-HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
           G        EK Y C  C K F   + L  H R HT E     
Sbjct: 1   GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 5e-05
 Identities = 11/29 (37%), Positives = 11/29 (37%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKC 563
           C  C K F     L  H RTHT E     
Sbjct: 15  CNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
              + T EKPY+C  C   FN   +L  H+
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQ 32

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 17/37 (45%), Positives = 20/37 (54%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK YIC  C K F   ++L RH R+HT EKP   
Sbjct: 7   GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T EKPY C +CG +F     L  H+
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHR 32

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           ++C  C K F    +L RH R HT EKP     G
Sbjct: 13  YICNECGKSFIQKSHLNRHRRIHTGEKPSGPSSG 46

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
              + T EKPY C  CG  F     L  H+
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHR 32

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 13/30 (43%), Positives = 15/30 (50%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T EKPYKC +CG  F  N  L  H+
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHR 32

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 17/37 (45%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C K FT  ++L RH RVHT  KP   
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 14/32 (43%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K FT   +L RH R HT  KP     G
Sbjct: 15  CNECGKVFTQNSHLARHRRVHTGGKPSGPSSG 46

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 8e-04
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
              + T EKPYKC  CG  F  N  L  H+
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHR 32

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 7/30 (23%), Positives = 11/30 (36%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                   E+ ++C DCG  F    +   H
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQH 31

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              E+ + C  C K F   +   +H R+HT EKP   
Sbjct: 7   GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 12/34 (35%), Positives = 13/34 (38%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
             C  C K F       +H R HT EKP     G
Sbjct: 13  HRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSSG 46

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 6/30 (20%), Positives = 11/30 (36%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNH 578
               +   E+ ++C  CG  F    +   H
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQH 31

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 11/37 (29%), Positives = 15/37 (40%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK   C  C K F + + L  H R H ++K    
Sbjct: 7   GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 12/30 (40%), Positives = 13/30 (43%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T EKP KC +CG AF     L  H
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMH 31

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
             C  C K F +   L  H RTH ++K      G
Sbjct: 13  CKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG 46

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 7e-04
 Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
               + T EKP KC  CG  F +   L  H
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMH 31

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                T E+ Y+C +CG AF    +L  H
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMH 31

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              E+ Y C  C K F   + L  H R+H  EKP   
Sbjct: 7   GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 5e-05
 Identities = 12/32 (37%), Positives = 12/32 (37%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C  C K F     L  H R H  EKP     G
Sbjct: 15  CSECGKAFIQKSTLSMHQRIHRGEKPSGPSSG 46

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                T+ K Y C +CG AF     L  H+
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQ 32

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.2 bits (87), Expect = 5e-04
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
               K+Y C  C K FT   +L RH ++HT +     
Sbjct: 7   GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                T +KP++C  CG +F    +L  H
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTH 31

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 359 GIHLK-HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
           G        +K + C +C K F     L  H R+HT EK    
Sbjct: 1   GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 39.8 bits (94), Expect = 5e-05
 Identities = 12/31 (38%), Positives = 13/31 (41%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC 563
           F C +C K F     L  H R HT EK    
Sbjct: 13  FECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.0 bits (111), Expect = 2e-07
 Identities = 18/50 (36%), Positives = 26/50 (52%)

Query: 370 YICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNS 419
           YICE C       + L++H+R HT+ +PY C  C  +F    +L  H  S
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 43.2 bits (101), Expect = 5e-06
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)

Query: 338 HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEK 396
           ++C  CG +  + + L+ HI+     H   + Y C YC+  F     L +HM+   + K
Sbjct: 2   YICEECGIRXKKPSMLKKHIR----THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.9 bits (95), Expect = 4e-05
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC-VCGLGFNFNVSLKNHKQK 581
           ++CE C         LK+H+RTHT+ +PY C  C   F    +L  H + 
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.2 bits (88), Expect = 4e-04
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 503 CPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEK 559
           C  C     + + L  HI+     H   + + C YCN  F     L +HM++  + K
Sbjct: 4   CEECGIRXKKPSMLKKHIR----THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
               K++ C  C + FT  ++L +H R+HT EKP   
Sbjct: 7   GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 7/30 (23%), Positives = 12/30 (40%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 ++ K ++C +CG  F     L  H
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQH 31

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
             C  C + FT   +L +H R HT EKP     G
Sbjct: 13  HQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG 46

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNH 578
               + ++ K ++C  CG GF     L  H
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQH 31

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 9/30 (30%), Positives = 10/30 (33%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                 T  KPY C  C   F+    L  H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 13/37 (35%), Positives = 15/37 (40%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
               K Y C  C K F+  + L  H R HT  KP   
Sbjct: 7   GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           + C  C K F+    L  H R+HT  KP     G
Sbjct: 13  YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG 46

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 9/30 (30%), Positives = 11/30 (36%), Gaps = 1/30 (3%)

Query: 550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNH 578
               + T  KPY C  C   F+    L  H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
                + EK + C +CG  F +  +L+ H+
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQ 32

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.9 bits (107), Expect = 9e-07
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK++ C+ C K F + + LR H RVH  EK    
Sbjct: 7   GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 9e-05
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           C+ C K F ++  L+ H R H  EK      G
Sbjct: 15  CDECGKNFCYISALRIHQRVHMGEKCSGPSSG 46

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHK 579
              + + EK + C  CG  F +  +L+ H+
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQ 32

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 46.1 bits (110), Expect = 4e-07
 Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 3/45 (6%)

Query: 359 GIHL-KHQLEKTYICEY--CHKEFTFYNYLRRHMRVHTNEKPYKC 400
           G        EK + C +  C   F+  + L RH R H+  KP   
Sbjct: 1   GSSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 45.0 bits (107), Expect = 9e-07
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 533 FVCEY--CNKEFTFLQYLKRHMRTHTNEKPYKCVCG 566
           F C +  C   F+    L RH R+H+  KP     G
Sbjct: 13  FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG 48

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 47.6 bits (112), Expect = 4e-07
 Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 7/90 (7%)

Query: 328 HKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRR 387
                 + + + C  C  K +   E   H +            +C YC   F      + 
Sbjct: 7   GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR------NAAVCPYCSLRFFSPELKQE 60

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           H       K   C +C   F  + S+  H+
Sbjct: 61  H-ESKCEYKKLTCLECMRTFKSSFSIWRHQ 89

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 46.0 bits (108), Expect = 2e-06
 Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 8/92 (8%)

Query: 491 HIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKR 550
                 +    QC  C        E  +H +        R   VC YC+  F   +  + 
Sbjct: 7   GASPVENKEVYQCRLCNAKLSSLLEQGSHERLC------RNAAVCPYCSLRFFSPELKQE 60

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNHKQK 581
           H  +    K   C  C   F  + S+  H+ +
Sbjct: 61  H-ESKCEYKKLTCLECMRTFKSSFSIWRHQVE 91

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 11/37 (29%), Positives = 12/37 (32%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              E  Y C  C K F   + L  H R H  E     
Sbjct: 5   SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 42.1 bits (100), Expect = 7e-06
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 390 RVHTNEKPYKCKDCGAAFNHNVSLKNH 416
              + E PY+C +CG AFN    L +H
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISH 29

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 39.4 bits (93), Expect = 7e-05
 Identities = 10/31 (32%), Positives = 11/31 (35%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC 563
           + C  C K F     L  H RTH  E     
Sbjct: 11  YECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 9/37 (24%), Positives = 14/37 (37%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              E  Y C  C K F+  + L  H + H+ +     
Sbjct: 7   GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                T E PY+C +CG  F+    L +H
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSH 31

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 535 CEYCNKEFTFLQYLKRHMRTHTNEKPYKC 563
           C  C K F+    L  H +TH+ +     
Sbjct: 15  CCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 42.7 bits (101), Expect = 6e-06
 Identities = 11/36 (30%), Positives = 13/36 (36%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYK 399
              E  Y+C  C K FT    L  H R  +   P  
Sbjct: 6   SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 10/29 (34%), Positives = 11/29 (37%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
                  E PY C  CG +F    SL  H
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVH 30

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.9 bits (86), Expect = 6e-04
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYK 562
           ++C  C K FT    L  H R+ +   P  
Sbjct: 12  YLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 42.2 bits (100), Expect = 8e-06
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 390 RVHTNEKPYKCKDCGAAFNHNVSLKNH 416
              + ++ Y+C++CG +F    SL  H
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLH 29

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNEKPY 398
           ++ Y C+ C K F     L  H R+HT   P 
Sbjct: 8   QRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 390 RVHTNEKPYKCKDCGAAFNHNVSLKNH 416
              + EKPY C +C   F+ N  L  H
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQH 29

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.3 bits (87), Expect = 4e-04
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKC 400
              EK Y C  C + F+  N L +H ++HT +     
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 16/28 (57%), Positives = 21/28 (75%)

Query: 532 TFVCEYCNKEFTFLQYLKRHMRTHTNEK 559
           +FVCE C + F   ++LKRH R+HTNEK
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 36.5 bits (85), Expect = 5e-04
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 368 KTYICEYCHKEFTFYNYLRRHMRVHTNEK 396
           ++++CE C + F    +L+RH R HTNEK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 42.6 bits (99), Expect = 4e-05
 Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 361 HLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
            L  +    ++C  C   F+    L++H+R    E    C  C   F    S  +H
Sbjct: 66  LLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDH 119

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 2/75 (2%)

Query: 328 HKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRR 387
            +     G Y  C +C  +         H+   H    L  +Y+C  C+     Y+ L  
Sbjct: 10  QQNKKVEGGY-ECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSE 68

Query: 388 H-MRVHTNEKPYKCK 401
           H ++ H  E+ +K  
Sbjct: 69  HNLKYHPGEENFKLT 83

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 486 YHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFL 545
           +H N   K    G+  +C +C    P     + H+   H    L  ++VC  CN      
Sbjct: 6   HHHNQQNKKVEGGY--ECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63

Query: 546 QYLKRH-MRTHTNEKPYKC 563
             L  H ++ H  E+ +K 
Sbjct: 64  DALSEHNLKYHPGEENFKL 82

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 37.3 bits (87), Expect = 4e-04
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNH 416
             R  T  KP++C DC  +F+ +  L  H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALH 30

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 36

 Score = 37.1 bits (85), Expect = 5e-04
 Identities = 16/29 (55%), Positives = 22/29 (75%)

Query: 368 KTYICEYCHKEFTFYNYLRRHMRVHTNEK 396
           K + CEYC+K F F + L+ H+R+HTNEK
Sbjct: 8   KIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 36

 Score = 36.8 bits (84), Expect = 6e-04
 Identities = 17/29 (58%), Positives = 20/29 (68%)

Query: 531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEK 559
           + F CEYCNK F F   L+ H+R HTNEK
Sbjct: 8   KIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	606
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.93
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.86
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.85
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.84
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.81
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.8
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.76
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.75
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.75
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.74
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.73
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.73
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.73
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.72
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.69
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.69
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.68
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.68
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.68
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.67
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.65
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.64
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.63
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.63
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.61
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.6
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.6
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.57
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.57
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.56
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.55
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.54
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.54
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.53
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.53
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.52
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.52
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.51
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.5
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.5
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.49
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.47
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.46
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.46
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.46
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.46
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.45
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.44
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.44
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.43
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.42
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.42
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.41
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.41
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.41
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.39
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.35
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.35
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.35
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.35
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.34
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.34
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.31
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.31
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.3
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.28
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.28
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.26
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.23
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.21
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.18
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.13
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.13
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.1
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.05
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.03
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.03
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.01
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.0
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.0
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.0
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.0
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.0
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.99
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.99
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.98
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.98
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.97
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.97
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.97
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.97
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.96
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.96
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.96
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.95
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.95
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.95
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.95
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.94
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.94
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.93
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.93
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.93
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.92
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.92
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.89
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.89
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.89
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.89
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.88
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.88
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.87
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.87
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.86
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.85
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.84
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.84
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.83
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.82
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.81
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.81
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.79
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.77
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.77
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.77
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.64
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.63
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.62
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.61
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.6
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.59
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.56
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.51
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.5
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.49
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.46
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.39
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.37
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.34
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.33
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.33
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.31
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.31
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.23
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.22
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.21
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.21
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.18
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.17
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.15
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.15
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.14
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.14
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.14
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.13
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.42
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.13
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.12
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.12
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.12
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.37
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.06
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.01
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.97
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.2
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.92
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.91
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.91
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.89
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.88
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.88
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.86
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.86
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.03
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.8
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.0
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.79
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.77
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.76
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.72
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.72
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.71
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.84
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.55
1v65_A	64	Riken cDNA 2610044O15; transcriptional repressor,	97.46
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.26
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.05
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.62
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.89
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.85
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.8
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.58
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.42
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.03
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.86
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	89.94
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	87.62
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	84.17
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	82.01
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	80.76

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=5e-36  Score=279.34  Aligned_cols=184  Identities=34%  Similarity=0.625  Sum_probs=139.2

Q ss_pred             HHHHHHHHhccccccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcchhccCChhHHhcccccCCCCCCChHH
Q psy15165        350 KAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYET  429 (606)
Q Consensus       350 ~~~l~~H~~~~h~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~C~~~f~~~~  429 (606)
                      ...|..|+.    .+.++++|.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|++           
T Consensus         6 ~~~l~~h~~----~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-----------   70 (190)
T 2i13_A            6 SSSSVAQAA----LEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQR-----------   70 (190)
T ss_dssp             -----------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHH-----------
T ss_pred             hccchhhhh----hcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHH-----------
Confidence            345777877    78889999999999999999999999999999999999999999999988888753           


Q ss_pred             HHHHHHHhcCCCCCcccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCc
Q psy15165        430 YLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKT  509 (606)
Q Consensus       430 ~l~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~  509 (606)
                             .|++ +++|.|++|++.|.....|..|++.|+++++                            |.|++|++.
T Consensus        71 -------~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------~~C~~C~~~  114 (190)
T 2i13_A           71 -------THTG-EKPYKCPECGKSFSQRANLRAHQRTHTGEKP----------------------------YACPECGKS  114 (190)
T ss_dssp             -------HHHC-CCCEECTTTCCEESCHHHHHHHHHHHHTCCC----------------------------EECTTTCCE
T ss_pred             -------hcCC-CCCccCcccCCccCCHHHHHHHHHhcCCCCC----------------------------CcCCCCCCc
Confidence                   3444 7889999999999999999999999987776                            999999999


Q ss_pred             CCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccch
Q psy15165        510 FPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLT  588 (606)
Q Consensus       510 f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~  588 (606)
                      |.+...|..|++ .|   +++++|.|++|++.|.+...|..|+++|++++||.|. |+++|.+...|..|+++|+|++||
T Consensus       115 f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          115 FSQLAHLRAHQR-TH---TGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             ESSHHHHHHHHH-HH---HCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             cCCHHHHHHHHH-Hh---CCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            999999999998 56   7899999999999999999999999999999999998 999999999999999999999986

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.5e-34  Score=269.36  Aligned_cols=183  Identities=34%  Similarity=0.653  Sum_probs=142.7

Q ss_pred             hHHHHHHhccCCcceecccCccccCCHHHHHHHHhccccccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        324 HLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       324 ~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|..|++.+.+.++|.|++|++.|.+...|..|++    .|.++++|.|++|++.|.+...|..|+++|.++++|.|+.|
T Consensus         8 ~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~----~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   83 (190)
T 2i13_A            8 SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQR----THTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC   83 (190)
T ss_dssp             -----------------------CCSSHHHHHGGG----CC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTT
T ss_pred             cchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHH----HcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCccc
Confidence            34455554455588999999999999999999998    78889999999999999999999999999999999999999


Q ss_pred             hhccCChhHHhcccccCCCCCCChHHHHHHHHHhcCCCCCcccCCCCCCccCCHHHHHHHHHHhcCCCCCcCcccccccc
Q psy15165        404 GAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCA  483 (606)
Q Consensus       404 ~~~f~~~~~L~~H~~~~C~~~f~~~~~l~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~  483 (606)
                      ++.|.+...|..|++                  .|++ +++|.|++|++.|.....|..|++.|+++++           
T Consensus        84 ~~~f~~~~~l~~H~~------------------~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-----------  133 (190)
T 2i13_A           84 GKSFSQRANLRAHQR------------------THTG-EKPYACPECGKSFSQLAHLRAHQRTHTGEKP-----------  133 (190)
T ss_dssp             CCEESCHHHHHHHHH------------------HHHT-CCCEECTTTCCEESSHHHHHHHHHHHHCCCC-----------
T ss_pred             CCccCCHHHHHHHHH------------------hcCC-CCCCcCCCCCCccCCHHHHHHHHHHhCCCCC-----------
Confidence            999999999888854                  3445 7899999999999999999999999988877           


Q ss_pred             chhhhhcccccccCCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCc
Q psy15165        484 EVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPY  561 (606)
Q Consensus       484 ~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~  561 (606)
                                       |.|++|++.|.+...|..|++ .|   ++++||.|++|++.|.+...|..|+++|+|++||
T Consensus       134 -----------------~~C~~C~~~f~~~~~L~~H~~-~H---~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          134 -----------------YKCPECGKSFSREDNLHTHQR-TH---TGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             -----------------EECTTTCCEESCHHHHHHHHH-HH---HCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             -----------------eECCCCCcccCCHHHHHHHHH-hc---CCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence                             999999999999999999998 56   8899999999999999999999999999999987

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=3.7e-29  Score=232.77  Aligned_cols=77  Identities=27%  Similarity=0.572  Sum_probs=45.0

Q ss_pred             ccC--CCCCCcCCChHHHHHhhhcccccCCCCccccccc--cchhccChhhHHHHHhhhcCCCCccc-c---cCccCCch
Q psy15165        501 LQC--PHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEY--CNKEFTFLQYLKRHMRTHTNEKPYKC-V---CGLGFNFN  572 (606)
Q Consensus       501 ~~C--~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C-~---C~~~F~~~  572 (606)
                      |.|  +.|++.|.+...|..|++ .|   ++++||.|++  |+++|.+...|.+|+++|+|   |.| .   |++.|.+.
T Consensus       105 ~~C~~~~C~k~f~~~~~L~~H~~-~H---~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~  177 (190)
T 1tf6_A          105 YVCHFENCGKAFKKHNQLKVHQF-SH---TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTW  177 (190)
T ss_dssp             CEECSSSSCEECSSHHHHHHHHG-GG---SSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCH
T ss_pred             eeCCCCCCccccCCHHHHHHHHH-Hh---CCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccH
Confidence            555  556666666666666655 33   5556666655  66666666666666666655   555 2   66666666


Q ss_pred             hhHHHhhhcccc
Q psy15165        573 VSLKNHKQKCSV  584 (606)
Q Consensus       573 ~~L~~H~~~h~~  584 (606)
                      ..|..|+++|++
T Consensus       178 ~~l~~H~~~h~~  189 (190)
T 1tf6_A          178 TLYLKHVAECHQ  189 (190)
T ss_dssp             HHHHHHHTTCC-
T ss_pred             HHHHHHHHhhcC
Confidence            666666666654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=6.8e-29  Score=230.99  Aligned_cols=168  Identities=30%  Similarity=0.538  Sum_probs=152.4

Q ss_pred             Ccceec--ccCccccCCHHHHHHHHhccccccCCCCcccc--cccccccCchHHHHhhhhhcCCCCccccC--cchhccC
Q psy15165        335 GQYHVC--PHCGKKFTRKAELQLHIKGIHLKHQLEKTYIC--EYCHKEFTFYNYLRRHMRVHTNEKPYKCK--DCGAAFN  408 (606)
Q Consensus       335 ~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~h~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f~  408 (606)
                      .++|.|  +.|++.|.+...|..|++    .|.++++|.|  ..|++.|.+...|..|+++|.++++|.|+  .|++.|.
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~----~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   85 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLC----KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFT   85 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHH----HHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEES
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHH----hcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccC
Confidence            478999  689999999999999999    7888999999  89999999999999999999999999999  8999999


Q ss_pred             ChhHHhcccccCCCCCCChHHHHHHHHHhcCCCCCcccC--CCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchh
Q psy15165        409 HNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLC--YICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVY  486 (606)
Q Consensus       409 ~~~~L~~H~~~~C~~~f~~~~~l~~h~~~~~~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~  486 (606)
                      +...|..|++                 ..|.....+|.|  +.|++.|...+.|..|+++|++++|              
T Consensus        86 ~~~~l~~H~~-----------------~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~--------------  134 (190)
T 1tf6_A           86 TKANMKKHFN-----------------RFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLP--------------  134 (190)
T ss_dssp             CHHHHHHHHH-----------------TTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCS--------------
T ss_pred             CHHHHHHHHH-----------------HhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCC--------------
Confidence            9999988863                 233344789999  8999999999999999999988777              


Q ss_pred             hhhcccccccCCccccCCC--CCCcCCChHHHHHhhhcccccCCCCccccccc---cchhccChhhHHHHHhhhcCC
Q psy15165        487 HINGHIKDKHSGFFLQCPH--CPKTFPRKTELSNHIKGIHMKHELRQTFVCEY---CNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       487 ~l~~H~~~~h~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~---C~k~f~~~~~L~~H~~~H~~~  558 (606)
                                    |.|++  |++.|.+...|..|++ +|   ++   |.|..   |++.|.+...|..|+++|+|+
T Consensus       135 --------------~~C~~~~C~k~F~~~~~L~~H~~-~H---~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          135 --------------YECPHEGCDKRFSLPSRLKRHEK-VH---AG---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             --------------SBCCSSSCCCBCSSHHHHHHHHT-SS---CS---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             --------------ccCCCCCCCchhcCHHHHHHHHH-Hh---CC---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence                          99988  9999999999999998 56   55   99999   999999999999999999875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=6.3e-26  Score=203.50  Aligned_cols=143  Identities=27%  Similarity=0.508  Sum_probs=118.9

Q ss_pred             CcccccccccccCchHHHHhhhh---hcCCCCccccCcchhccCChhHHhcccccCCCCCCChHHHHHHHHHhcCCCCCc
Q psy15165        368 KTYICEYCHKEFTFYNYLRRHMR---VHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVS  444 (606)
Q Consensus       368 ~~~~C~~C~k~f~~~~~L~~H~~---~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~C~~~f~~~~~l~~h~~~~~~~~~~  444 (606)
                      .+|.|+.|++.|.+...|..|++   +|.++++|.|+.|+                                        
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~----------------------------------------   41 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG----------------------------------------   41 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTT----------------------------------------
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCC----------------------------------------
Confidence            46778888888888888888877   67777888887662                                        


Q ss_pred             ccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCC--CCCcCCChHHHHHhhhc
Q psy15165        445 NLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPH--CPKTFPRKTELSNHIKG  522 (606)
Q Consensus       445 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~--C~~~f~~~~~L~~H~~~  522 (606)
                        |..|++.|.....|..|++.|+++++                            |.|++  |++.|.+...|..|++ 
T Consensus        42 --C~~c~~~f~~~~~l~~H~~~h~~~~~----------------------------~~C~~~~C~~~f~~~~~l~~H~~-   90 (155)
T 2gli_A           42 --CSRELRPFKAQYMLVVHMRRHTGEKP----------------------------HKCTFEGCRKSYSRLENLKTHLR-   90 (155)
T ss_dssp             --CTTTTCCCSSHHHHHHHTHHHHCCCC----------------------------CCCCSTTCCCCCSSHHHHHHHHH-
T ss_pred             --ccchhhhhhhHHHHHHHHHhcCCCCC----------------------------ccCCCCCCCCcccCHHHHHHHHH-
Confidence              66777888888888888888877766                            78875  9999999999999988 


Q ss_pred             ccccCCCCccccccc--cchhccChhhHHHHH-hhhcCCCCccc--c-cCccCCchhhHHHhhhcccc
Q psy15165        523 IHMKHELRQTFVCEY--CNKEFTFLQYLKRHM-RTHTNEKPYKC--V-CGLGFNFNVSLKNHKQKCSV  584 (606)
Q Consensus       523 ~H~~~~~~k~y~C~~--C~k~f~~~~~L~~H~-~~H~~~kp~~C--~-C~~~F~~~~~L~~H~~~h~~  584 (606)
                      .|   +++++|.|++  |++.|.+...|..|+ ++|++++||.|  + |+++|.+.+.|..|+++|+|
T Consensus        91 ~h---~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           91 SH---TGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HT---TTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             Hc---CCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            55   7888899988  999999999999998 78988999999  3 99999999999999988875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=1.7e-24  Score=194.09  Aligned_cols=148  Identities=24%  Similarity=0.505  Sum_probs=115.2

Q ss_pred             cceecccCccccCCHHHHHHHHhccccccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcchhccCChhHHhc
Q psy15165        336 QYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKN  415 (606)
Q Consensus       336 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~  415 (606)
                      .+|.|+.|++.|.+...|..|++..| .|.++++|.|++|+                       |..|++.|.+...|..
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h-~h~~~~~~~C~~c~-----------------------C~~c~~~f~~~~~l~~   57 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEH-IHGERKEFVCHWGG-----------------------CSRELRPFKAQYMLVV   57 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHT-SSSCSSCCCCCBTT-----------------------CTTTTCCCSSHHHHHH
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhc-cCCCCcceeCCCCC-----------------------ccchhhhhhhHHHHHH
Confidence            46899999999999999999998544 47888999998764                       4445555544444444


Q ss_pred             ccccCCCCCCChHHHHHHHHHhcCCCCCcccCCC--CCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccc
Q psy15165        416 HKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYI--CGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIK  493 (606)
Q Consensus       416 H~~~~C~~~f~~~~~l~~h~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~  493 (606)
                      |++                  .|++ +++|.|++  |++.|.....|..|++.|+++++                     
T Consensus        58 H~~------------------~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~---------------------   97 (155)
T 2gli_A           58 HMR------------------RHTG-EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKP---------------------   97 (155)
T ss_dssp             HTH------------------HHHC-CCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCC---------------------
T ss_pred             HHH------------------hcCC-CCCccCCCCCCCCcccCHHHHHHHHHHcCCCCC---------------------
Confidence            432                  1222 45566654  77777777778888888877666                     


Q ss_pred             cccCCccccCCC--CCCcCCChHHHHHhhhcccccCCCCccccccc--cchhccChhhHHHHHhhhcC
Q psy15165        494 DKHSGFFLQCPH--CPKTFPRKTELSNHIKGIHMKHELRQTFVCEY--CNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       494 ~~h~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~--C~k~f~~~~~L~~H~~~H~~  557 (606)
                             |.|++  |++.|.+...|..|++..|   +++++|.|++  |++.|.+...|..|+++|+|
T Consensus        98 -------~~C~~~~C~~~f~~~~~L~~H~~~~H---~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           98 -------YMCEHEGCSKAFSNASDRAKHQNRTH---SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             -------EECCSTTCCCEESSSSTTHHHHHHTT---CSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             -------eeCCCCCCCCccCCHHHHHHHHHHhc---CCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence                   89998  9999999999999985467   8899999988  99999999999999999986

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=1.1e-22  Score=174.79  Aligned_cols=114  Identities=29%  Similarity=0.470  Sum_probs=105.9

Q ss_pred             CCCcccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHhh
Q psy15165        441 YEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHI  520 (606)
Q Consensus       441 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~  520 (606)
                      ++++|.|++|++.|.....|..|++.|.++++                            |.|++|++.|.+...|..|+
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------~~C~~C~~~f~~~~~l~~H~   55 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKP----------------------------FECPKCGKCYFRKENLLEHE   55 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCS----------------------------CBCTTTCCBCSSHHHHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCC----------------------------eECCCCCchhcCHHHHHHHH
Confidence            37899999999999999999999999988776                            99999999999999999999


Q ss_pred             hcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhccc
Q psy15165        521 KGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       521 ~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~  583 (606)
                      +..| .+.++++|.|++|++.|.+...|..|+++|++++||.|. |++.|.+...|..|++++|
T Consensus        56 ~~~~-~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  118 (124)
T 2dlq_A           56 ARNC-MNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH  118 (124)
T ss_dssp             HHCC-CCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             hhhh-cCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHC
Confidence            8433 558899999999999999999999999999999999998 9999999999999998644

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=2.3e-22  Score=180.11  Aligned_cols=126  Identities=29%  Similarity=0.483  Sum_probs=112.4

Q ss_pred             CCcccCCCCCCccCCHHHHHHHHHH-hcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHhh
Q psy15165        442 EVSNLCYICGFFSAKRSTLAHHIQD-HIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHI  520 (606)
Q Consensus       442 ~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~  520 (606)
                      ..+|.|..|++.|.....|..|++. |.+..+...+.                    ...|.|++|++.|.+...|..|+
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~--------------------~~~~~C~~C~~~f~~~~~l~~H~   82 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV--------------------CYWEECPREGKSFKAKYKLVNHI   82 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCC--------------------CCBTTCTTSSCCCSSHHHHHHHT
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCcc--------------------ccccCCCCcccccCCHHHHHHHH
Confidence            6789999999999999999999998 65554421111                    12389999999999999999999


Q ss_pred             hcccccCCCCccccccc--cchhccChhhHHHHHhhhcCCCCcccc---cCccCCchhhHHHhhhccccccchhhc
Q psy15165        521 KGIHMKHELRQTFVCEY--CNKEFTFLQYLKRHMRTHTNEKPYKCV---CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       521 ~~~H~~~~~~k~y~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~---C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      + .|   .++++|.|.+  |++.|.+...|.+|+++|++++||.|.   |++.|.+...|..|+++|++++||.|.
T Consensus        83 ~-~h---~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           83 R-VH---TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             H-HH---HCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             H-hc---CCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            8 56   8899999998  999999999999999999999999995   999999999999999999999999985

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.86  E-value=2.2e-22  Score=172.91  Aligned_cols=115  Identities=28%  Similarity=0.569  Sum_probs=101.4

Q ss_pred             CCcccCC--CCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHh
Q psy15165        442 EVSNLCY--ICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNH  519 (606)
Q Consensus       442 ~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H  519 (606)
                      .++|.|+  .|++.|.+...|..|++.| ++++                            |.|++|++.|.+...|..|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~----------------------------~~C~~C~~~f~~~~~l~~H   53 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRV----------------------------HVCAECGKAFVESSKLKRH   53 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCC----------------------------EECTTTCCEESSHHHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCC----------------------------eECCCCCchhCCHHHHHHH
Confidence            5789999  8999999999999999988 5555                            9999999999999999999


Q ss_pred             hhcccccCCCCccccccc--cchhccChhhHHHHHhhhcCCCCccc--c-cCccCCchhhHHHhhhccccccchh
Q psy15165        520 IKGIHMKHELRQTFVCEY--CNKEFTFLQYLKRHMRTHTNEKPYKC--V-CGLGFNFNVSLKNHKQKCSVFLLTE  589 (606)
Q Consensus       520 ~~~~H~~~~~~k~y~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C--~-C~~~F~~~~~L~~H~~~h~~~~~~~  589 (606)
                      ++ .|   .++++|.|.+  |++.|.+...|..|+++|++++||.|  . |+++|.+...|..|+++|+++++++
T Consensus        54 ~~-~h---~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           54 QL-VH---TGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             GG-GT---SCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HH-Hc---CCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            98 56   8899999986  99999999999999999999999999  4 9999999999999999999998863

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.86  E-value=4.5e-22  Score=169.61  Aligned_cols=109  Identities=31%  Similarity=0.564  Sum_probs=103.9

Q ss_pred             CCcccCCC--CCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCC--CCCCcCCChHHHH
Q psy15165        442 EVSNLCYI--CGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCP--HCPKTFPRKTELS  517 (606)
Q Consensus       442 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~--~C~~~f~~~~~L~  517 (606)
                      +++|.|.+  |++.|.....|..|++.|.++++                            |.|+  .|++.|.+...|.
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------~~C~~~~C~~~f~~~~~l~   55 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKP----------------------------YQCDFKDCERRFSRSDQLK   55 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCC----------------------------EECCSTTCCCEESSHHHHH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCC----------------------------ccCCCCCCcCccCCHHHHH
Confidence            78999997  99999999999999999988777                            8999  7999999999999


Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCccc--c-cCccCCchhhHHHhhhcc
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC--V-CGLGFNFNVSLKNHKQKC  582 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C--~-C~~~F~~~~~L~~H~~~h  582 (606)
                      .|++ .|   .++++|.|++|++.|.+...|..|+++|++++||.|  . |++.|.+...|..|+++|
T Consensus        56 ~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           56 RHQR-RH---TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHH-HH---HCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHH-Hc---CCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9998 56   789999999999999999999999999999999999  7 999999999999999987

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=3.5e-22  Score=172.56  Aligned_cols=105  Identities=21%  Similarity=0.374  Sum_probs=91.5

Q ss_pred             HHhcCCCCCcccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChH
Q psy15165        435 KTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKT  514 (606)
Q Consensus       435 ~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~  514 (606)
                      ..++.| +++|.|++||+.|...+.|..|+++|++++|                            |.|++|++.|.+..
T Consensus        14 ~~~h~G-ek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~----------------------------~~C~~C~k~F~~~~   64 (133)
T 2lt7_A           14 ELIVDG-RVYYICIVCKRSYVCLTSLRRHFNIHSWEKK----------------------------YPCRYCEKVFPLAE   64 (133)
T ss_dssp             EEEETT-EEEEEETTTCCEESCHHHHHHHHHHHHCCSC----------------------------EECSSSSCEESSHH
T ss_pred             eeecCC-CcCeECCCCCCCcCCHHHHHHHHHHcCCCCC----------------------------eeCCccCeeccccc
Confidence            344555 8999999999999999999999999988877                            89999999999999


Q ss_pred             HHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCC------Ccccc-cCccCCch
Q psy15165        515 ELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEK------PYKCV-CGLGFNFN  572 (606)
Q Consensus       515 ~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~k------p~~C~-C~~~F~~~  572 (606)
                      .|..|++ +|   ++++||.|++||++|.+...|..|+++|++++      +|.|. |++.|...
T Consensus        65 ~L~~H~~-~H---~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           65 YRTKHEI-HH---TGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHH-HH---HTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             chhhhcc-cc---CCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            9999998 56   88999999999999999999999999988764      58887 99888643

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.85  E-value=2.7e-21  Score=173.13  Aligned_cols=130  Identities=24%  Similarity=0.404  Sum_probs=107.8

Q ss_pred             cCCCCcccccccccccCchHHHHhhhhh-cCCCCccccCcchhccCChhHHhcccccCCCCCCChHHHHHHHHHhcCCCC
Q psy15165        364 HQLEKTYICEYCHKEFTFYNYLRRHMRV-HTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYE  442 (606)
Q Consensus       364 h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~C~~~f~~~~~l~~h~~~~~~~~  442 (606)
                      +....+|.|.+|++.|.+...|..|++. |.+..+.....                                       .
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~---------------------------------------~   60 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV---------------------------------------C   60 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCC---------------------------------------C
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCcc---------------------------------------c
Confidence            3445677888888888888888888876 65544322111                                       2


Q ss_pred             CcccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCC--CCCcCCChHHHHHhh
Q psy15165        443 VSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPH--CPKTFPRKTELSNHI  520 (606)
Q Consensus       443 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~--C~~~f~~~~~L~~H~  520 (606)
                      ..|.|.+|++.|.....|..|++.|+++++                            |.|++  |++.|.+...|..|+
T Consensus        61 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------~~C~~~~C~~~f~~~~~L~~H~  112 (155)
T 2rpc_A           61 YWEECPREGKSFKAKYKLVNHIRVHTGEKP----------------------------FPCPFPGCGKIFARSENLKIHK  112 (155)
T ss_dssp             CBTTCTTSSCCCSSHHHHHHHTHHHHCCCS----------------------------EECSCTTTCCEESCHHHHHHHH
T ss_pred             cccCCCCcccccCCHHHHHHHHHhcCCCCc----------------------------ccCCcCCCCCccCCHHHHHHHH
Confidence            347899999999999999999999988777                            89998  999999999999999


Q ss_pred             hcccccCCCCccccccc--cchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        521 KGIHMKHELRQTFVCEY--CNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       521 ~~~H~~~~~~k~y~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      + .|   +++++|.|.+  |++.|.+...|.+|+++|++++||.|.
T Consensus       113 ~-~h---~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          113 R-TH---TGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             T-TT---CSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             H-hh---CCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            8 56   8899999997  999999999999999999999999983

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.84  E-value=4.2e-22  Score=172.01  Aligned_cols=99  Identities=24%  Similarity=0.464  Sum_probs=88.5

Q ss_pred             ccccccCCc-cccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCcc
Q psy15165        491 HIKDKHSGF-FLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLG  568 (606)
Q Consensus       491 H~~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~  568 (606)
                      |..+ ++|+ +|.|++||+.|.+...|..|++ +|   ++++||.|++|+++|.+...|..|+++|+|++||.|. |+++
T Consensus        13 ~~~~-h~Gek~y~C~~C~k~F~~~~~L~~H~~-~H---~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~   87 (133)
T 2lt7_A           13 YELI-VDGRVYYICIVCKRSYVCLTSLRRHFN-IH---SWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKS   87 (133)
T ss_dssp             EEEE-ETTEEEEEETTTCCEESCHHHHHHHHH-HH---HCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCE
T ss_pred             ceee-cCCCcCeECCCCCCCcCCHHHHHHHHH-Hc---CCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCC
Confidence            3444 5554 4999999999999999999998 67   8999999999999999999999999999999999998 9999


Q ss_pred             CCchhhHHHhhhccccccc------hhhcccc
Q psy15165        569 FNFNVSLKNHKQKCSVFLL------TESMNSV  594 (606)
Q Consensus       569 F~~~~~L~~H~~~h~~~~~------~~c~~~~  594 (606)
                      |.+.+.|..|+++|++++|      |+|..+.
T Consensus        88 F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~  119 (133)
T 2lt7_A           88 FINYQFMSSHIKSVHSQDPSGDSKLYRLHPCR  119 (133)
T ss_dssp             ESSHHHHHHHHHHHTCCCTTSSSCCEEECCCC
T ss_pred             cCCHHHHHHHhHHhcCCCCCCCCCCeecCCCC
Confidence            9999999999999998755      6666654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=1e-20  Score=162.49  Aligned_cols=53  Identities=36%  Similarity=0.708  Sum_probs=38.1

Q ss_pred             CCCCcccccccccccCchHHHHhhhhhcCCCCccccCcchhccCChhHHhccc
Q psy15165        365 QLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK  417 (606)
Q Consensus       365 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~  417 (606)
                      +++++|.|++|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   55 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHE   55 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHH
Confidence            45667777777777777777777777777777777777777776666666664

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.81  E-value=1.1e-20  Score=162.20  Aligned_cols=117  Identities=30%  Similarity=0.583  Sum_probs=97.5

Q ss_pred             CCCccccC--cchhccCChhHHhcccccCCCCCCChHHHHHHHHHhcCCCCCcccCCCCCCccCCHHHHHHHHHHhcCCC
Q psy15165        394 NEKPYKCK--DCGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPR  471 (606)
Q Consensus       394 ~~~~~~C~--~C~~~f~~~~~L~~H~~~~C~~~f~~~~~l~~h~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  471 (606)
                      ++++|.|+  .|++.|.+...|..|++                  .| + .++|.|++|++.|.....|..|++.|++++
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~------------------~h-~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   61 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLH------------------TH-G-PRVHVCAECGKAFVESSKLKRHQLVHTGEK   61 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHG------------------GG-S-CCCEECTTTCCEESSHHHHHHHGGGTSCCC
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHH------------------Hc-C-CCCeECCCCCchhCCHHHHHHHHHHcCCCC
Confidence            35789998  89999999988888854                  33 3 789999999999999999999999998777


Q ss_pred             CCcCccccccccchhhhhcccccccCCccccCCC--CCCcCCChHHHHHhhhcccccCCCCcccccc--ccchhccChhh
Q psy15165        472 MKQKQICEICCAEVYHINGHIKDKHSGFFLQCPH--CPKTFPRKTELSNHIKGIHMKHELRQTFVCE--YCNKEFTFLQY  547 (606)
Q Consensus       472 ~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~--~C~k~f~~~~~  547 (606)
                      +                            |.|++  |++.|.+...|..|++ .|   .++++|.|+  .|++.|.+...
T Consensus        62 ~----------------------------~~C~~~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~~~C~~~f~~~~~  109 (124)
T 1ubd_C           62 P----------------------------FQCTFEGCGKRFSLDFNLRTHVR-IH---TGDRPYVCPFDGCNKKFAQSTN  109 (124)
T ss_dssp             C----------------------------EECCSTTCCCEESCHHHHHHHHH-HH---HCCCCCCCCSTTCCCCCSSTTT
T ss_pred             C----------------------------eeCCCCCCcCccCCHHHHHHHHH-Hh---CCCCceECCCCCCCCccCCHHH
Confidence            6                            89986  9999999999999998 56   889999996  49999999999


Q ss_pred             HHHHHhhhcCCCCcc
Q psy15165        548 LKRHMRTHTNEKPYK  562 (606)
Q Consensus       548 L~~H~~~H~~~kp~~  562 (606)
                      |..|+++|++++++.
T Consensus       110 L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C          110 LKSHILTHAKAKNNQ  124 (124)
T ss_dssp             THHHHHHHC------
T ss_pred             HHHHHHHHcccccCC
Confidence            999999999998863

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.80  E-value=4.2e-20  Score=157.31  Aligned_cols=112  Identities=27%  Similarity=0.558  Sum_probs=101.6

Q ss_pred             CCCCccccCc--chhccCChhHHhcccccCCCCCCChHHHHHHHHHhcCCCCCcccCC--CCCCccCCHHHHHHHHHHhc
Q psy15165        393 TNEKPYKCKD--CGAAFNHNVSLKNHKNSSCPKLYSYETYLKHLKTNHHGYEVSNLCY--ICGFFSAKRSTLAHHIQDHI  468 (606)
Q Consensus       393 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~~C~~~f~~~~~l~~h~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~  468 (606)
                      +++++|.|+.  |++.|.+...|..|++                  .|.+ +++|.|+  .|++.|.....|..|++.|+
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~------------------~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   62 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSR------------------KHTG-EKPYQCDFKDCERRFSRSDQLKRHQRRHT   62 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHH------------------HHHT-TCCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHH------------------hhCC-CCCccCCCCCCcCccCCHHHHHHHHHHcC
Confidence            5788999987  9999999998888853                  3444 7899999  79999999999999999998


Q ss_pred             CCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccc--cccchhccChh
Q psy15165        469 QPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVC--EYCNKEFTFLQ  546 (606)
Q Consensus       469 ~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C--~~C~k~f~~~~  546 (606)
                      ++++                            |.|++|++.|.+...|..|++ .|   +++++|.|  +.|++.|.+..
T Consensus        63 ~~~~----------------------------~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~~~C~~~f~~~~  110 (119)
T 2jp9_A           63 GVKP----------------------------FQCKTCQRKFSRSDHLKTHTR-TH---TGEKPFSCRWPSCQKKFARSD  110 (119)
T ss_dssp             CCCC----------------------------EECTTTCCEESCHHHHHHHHH-HH---HTCCCEECCSTTCCCEESSHH
T ss_pred             CCCC----------------------------ccCCccCchhCCHHHHHHHHH-Hh---cCCCCeeCCCCCCccccCCHH
Confidence            8777                            999999999999999999998 56   88999999  89999999999


Q ss_pred             hHHHHHhhh
Q psy15165        547 YLKRHMRTH  555 (606)
Q Consensus       547 ~L~~H~~~H  555 (606)
                      .|.+|+++|
T Consensus       111 ~L~~H~~~H  119 (119)
T 2jp9_A          111 ELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHhcC
Confidence            999999987

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.76  E-value=7.7e-19  Score=146.07  Aligned_cols=89  Identities=28%  Similarity=0.530  Sum_probs=84.0

Q ss_pred             CccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHH
Q psy15165        498 GFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLK  576 (606)
Q Consensus       498 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~  576 (606)
                      ..+|.|++|++.|.+...|..|++ .|   .++++|.|.+|++.|.+...|..|+++|++++||.|. |++.|.+...|.
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHER-TH---TDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHH-HH---CCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHH-Hc---CCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            345999999999999999999998 56   7889999999999999999999999999999999998 999999999999


Q ss_pred             Hhhhccccccchhh
Q psy15165        577 NHKQKCSVFLLTES  590 (606)
Q Consensus       577 ~H~~~h~~~~~~~c  590 (606)
                      .|+++|++++||.+
T Consensus        91 ~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           91 VHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHTTSCCCCCC
T ss_pred             HHHHHhCCCCCCcC
Confidence            99999999999864

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=8e-19  Score=146.21  Aligned_cols=100  Identities=20%  Similarity=0.334  Sum_probs=88.3

Q ss_pred             cccccccCCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCcc
Q psy15165        490 GHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLG  568 (606)
Q Consensus       490 ~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~  568 (606)
                      .+++.+.+..+|.|++|++.|.....|..|++ .|     .++|.|.+|++.|.....|..|++ |++++||.|. |++.
T Consensus         6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~H-----~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~   78 (107)
T 1wjp_A            6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHER-LC-----RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRT   78 (107)
T ss_dssp             CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHH-HH-----HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEE
T ss_pred             ccCcccCCCcCeECCCCCCccCCHHHHHHHHH-HC-----CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccch
Confidence            34555455556999999999999999999998 56     378999999999999999999996 9999999998 9999


Q ss_pred             CCchhhHHHhhh-ccccccchhhccccCC
Q psy15165        569 FNFNVSLKNHKQ-KCSVFLLTESMNSVSG  596 (606)
Q Consensus       569 F~~~~~L~~H~~-~h~~~~~~~c~~~~~~  596 (606)
                      |.+...|..|++ .|.+++||.|....+|
T Consensus        79 f~~~~~L~~H~~~~H~~~~~~~~~~p~sg  107 (107)
T 1wjp_A           79 FKSSFSIWRHQVEVHNQNNMAPTSGPSSG  107 (107)
T ss_dssp             CSSHHHHHHHHHHTSCCCCCCCCCCSCCC
T ss_pred             hCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Confidence            999999999997 9999999998765543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.8e-18  Score=140.99  Aligned_cols=87  Identities=25%  Similarity=0.466  Sum_probs=81.7

Q ss_pred             CccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHH
Q psy15165        498 GFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLK  576 (606)
Q Consensus       498 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~  576 (606)
                      ..+|.|++|++.|.+...|..|++ .|   .++++|.|++|++.|.+...|..|+++|++++||.|. |++.|.+...|.
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMR-CH---TGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGG-GC---CCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHH-hc---CCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            345999999999999999999998 56   7889999999999999999999999999999999998 999999999999


Q ss_pred             Hhhhccccccch
Q psy15165        577 NHKQKCSVFLLT  588 (606)
Q Consensus       577 ~H~~~h~~~~~~  588 (606)
                      .|+++|+++++.
T Consensus        82 ~H~~~h~~~~~p   93 (96)
T 2dmd_A           82 VHLRSHTGDSGP   93 (96)
T ss_dssp             HHHTTCCSCCCC
T ss_pred             HHHHHhcCCCCC
Confidence            999999988753

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.74  E-value=3.2e-19  Score=150.85  Aligned_cols=106  Identities=16%  Similarity=0.158  Sum_probs=91.9

Q ss_pred             cchhhhhcccccccCCccccCCCCCCcCCChHHHHHhhhcccccCCCCccc-cccccchhc--cChhhHHHHHhhhcCCC
Q psy15165        483 AEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTF-VCEYCNKEF--TFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       483 ~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y-~C~~C~k~f--~~~~~L~~H~~~H~~~k  559 (606)
                      .....|..|++++++..+|.|++|++.|.+...|..|++ .| .|.+.+++ .|++|++.|  .....|..|+++|++++
T Consensus         2 ss~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~~-~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~   79 (115)
T 2dmi_A            2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ET-GHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK   79 (115)
T ss_dssp             CCCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHH-HT-CCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCS
T ss_pred             ccchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHH-Hh-CccccCCCccCCCCCcccccccHHHHHHHhhccCCCc
Confidence            345678899999777777999999999999999999998 43 23666665 599999999  99999999999999999


Q ss_pred             Ccccc-cCccCCchhhHHHhhhccccccchhh
Q psy15165        560 PYKCV-CGLGFNFNVSLKNHKQKCSVFLLTES  590 (606)
Q Consensus       560 p~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c  590 (606)
                      ||.|. |++.|.+...|..|+++|+......+
T Consensus        80 ~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~  111 (115)
T 2dmi_A           80 VLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG  111 (115)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHHHHTTTTTCSCC
T ss_pred             ceECCCCCCccCCHHHHHHHHHHhCCcccCCC
Confidence            99998 99999999999999999987655433

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.73  E-value=1.1e-17  Score=139.10  Aligned_cols=90  Identities=28%  Similarity=0.485  Sum_probs=85.2

Q ss_pred             CCcccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHhhh
Q psy15165        442 EVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIK  521 (606)
Q Consensus       442 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~  521 (606)
                      +++|.|.+|++.|.....|..|++.|+++++                            |.|++|++.|.....|..|++
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------~~C~~C~~~f~~~~~l~~H~~   66 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERP----------------------------YTCDICHKAFRRQDHLRDHRY   66 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCC----------------------------CBCSSSCCBCSCHHHHHHHGG
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCC----------------------------cCCCCccchhCCHHHHHHHHH
Confidence            7789999999999999999999999987776                            999999999999999999998


Q ss_pred             cccccCCCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        522 GIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       522 ~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                       .|   .++++|.|.+|++.|.+...|..|+++|++++||.+
T Consensus        67 -~h---~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           67 -IH---SKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             -GS---CCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             -Hh---CCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence             56   889999999999999999999999999999999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.73  E-value=1.6e-18  Score=136.76  Aligned_cols=80  Identities=38%  Similarity=0.735  Sum_probs=76.4

Q ss_pred             ccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhh
Q psy15165        501 LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK  579 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~  579 (606)
                      |.|++|++.|.+...|..|++ .|   .++++|.|+.|++.|.+...|..|+++|++++||.|. |++.|.+...|..|+
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   77 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLL-IH---SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHS   77 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHH-HH---HTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHH
T ss_pred             ccCCCCcccccCchhHHHHHH-Hc---CCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHH
Confidence            899999999999999999998 56   7889999999999999999999999999999999998 999999999999999


Q ss_pred             hcccc
Q psy15165        580 QKCSV  584 (606)
Q Consensus       580 ~~h~~  584 (606)
                      ++|+|
T Consensus        78 ~~H~g   82 (82)
T 2kmk_A           78 RKHTG   82 (82)
T ss_dssp             HHHC-
T ss_pred             HhhCC
Confidence            99985

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.73  E-value=2.4e-18  Score=138.39  Aligned_cols=84  Identities=33%  Similarity=0.640  Sum_probs=78.0

Q ss_pred             ccccCC--CCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhH
Q psy15165        499 FFLQCP--HCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSL  575 (606)
Q Consensus       499 ~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L  575 (606)
                      .+|.|+  .|++.|.+...|..|++ .|   .++++|.|+.|++.|.+...|..|+++|++++||.|. |++.|.+...|
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   78 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIR-IH---TGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDER   78 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHH-HH---HCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHH-Hh---CCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHH
Confidence            349998  69999999999999998 56   7889999999999999999999999999999999998 99999999999


Q ss_pred             HHhhhcccccc
Q psy15165        576 KNHKQKCSVFL  586 (606)
Q Consensus       576 ~~H~~~h~~~~  586 (606)
                      ..|+++|++++
T Consensus        79 ~~H~~~H~~~k   89 (90)
T 1a1h_A           79 KRHTKIHLRQK   89 (90)
T ss_dssp             HHHHGGGGC--
T ss_pred             HHHHHHhcccC
Confidence            99999999875

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.72  E-value=2.7e-18  Score=124.80  Aligned_cols=58  Identities=26%  Similarity=0.509  Sum_probs=53.7

Q ss_pred             CCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        529 LRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       529 ~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      .||||.|++||++|.+.+.|..|+++|+|++||.|. ||++|.+.+.|..|+++|+|++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            378999999999999999999999999999999998 9999999999999999999864

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=2.3e-17  Score=134.34  Aligned_cols=91  Identities=23%  Similarity=0.482  Sum_probs=83.7

Q ss_pred             CCCCcccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHh
Q psy15165        440 GYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNH  519 (606)
Q Consensus       440 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H  519 (606)
                      +.+++|.|.+|++.|.....|..|++.|+++++                            |.|++|++.|.....|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------~~C~~C~~~f~~~~~l~~H   55 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP----------------------------YKCKTCDYAAADSSSLNKH   55 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCS----------------------------EECSSSCCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCC----------------------------EeCCCCCCccCCHHHHHHH
Confidence            347899999999999999999999999877766                            9999999999999999999


Q ss_pred             hhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcc
Q psy15165        520 IKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYK  562 (606)
Q Consensus       520 ~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~  562 (606)
                      ++ .|   .++++|.|++|++.|.+...|..|+++|+++++..
T Consensus        56 ~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p~   94 (96)
T 2dmd_A           56 LR-IH---SDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPS   94 (96)
T ss_dssp             HH-HS---CCCCCEECSSSSCEESSHHHHHHHHTTCCSCCCCC
T ss_pred             HH-Hh---CCCCCccCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence            98 56   88999999999999999999999999999987643

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.69  E-value=2.4e-17  Score=132.44  Aligned_cols=87  Identities=29%  Similarity=0.571  Sum_probs=78.9

Q ss_pred             CCcccCC--CCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHh
Q psy15165        442 EVSNLCY--ICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNH  519 (606)
Q Consensus       442 ~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H  519 (606)
                      +++|.|+  .|++.|.....|..|++.|.++++                            |.|+.|++.|.+...|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------~~C~~C~~~f~~~~~l~~H   53 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKP----------------------------FQCRICMRNFSRSDHLTTH   53 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCC----------------------------EECTTTCCEESCHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCC----------------------------ccCCCCCcccCCHHHHHHH
Confidence            6799998  599999999999999999988776                            9999999999999999999


Q ss_pred             hhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCC
Q psy15165        520 IKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP  560 (606)
Q Consensus       520 ~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp  560 (606)
                      ++ .|   .++++|.|++|++.|.+...|..|+++|+++++
T Consensus        54 ~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           54 IR-TH---TGEKPFACDICGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             HH-HH---HCCCCEECTTTCCEESSHHHHHHHHGGGGC---
T ss_pred             HH-Hc---CCCCCccCCCCCchhCCHHHHHHHHHHhcccCC
Confidence            98 56   789999999999999999999999999999863

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=2.2e-17  Score=138.18  Aligned_cols=84  Identities=30%  Similarity=0.648  Sum_probs=78.7

Q ss_pred             CCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhH
Q psy15165        497 SGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSL  575 (606)
Q Consensus       497 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L  575 (606)
                      +..+|.| .|++.|.+...|..|++ .|   .++++|.|++|++.|.+...|..|+++|++++||.|. |++.|.+...|
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMS-MH---LGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHH-HH---SCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHH-Hc---CCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            3445999 99999999999999998 56   7889999999999999999999999999999999998 99999999999


Q ss_pred             HHhhhccccc
Q psy15165        576 KNHKQKCSVF  585 (606)
Q Consensus       576 ~~H~~~h~~~  585 (606)
                      ..|++.|+..
T Consensus        82 ~~H~~~~~~~   91 (110)
T 2csh_A           82 HRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHcccc
Confidence            9999999864

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=3.8e-17  Score=132.75  Aligned_cols=83  Identities=29%  Similarity=0.522  Sum_probs=77.0

Q ss_pred             CccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCC--CCcccc-cCccCCchhh
Q psy15165        498 GFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNE--KPYKCV-CGLGFNFNVS  574 (606)
Q Consensus       498 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~--kp~~C~-C~~~F~~~~~  574 (606)
                      ..+|.|++|++.|.+...|..|++ .|   .++++|.|++|++.|.+...|..|+++|+++  +||.|. |++.|.+...
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~   80 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKL-SH---SGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDH   80 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHH-HS---CSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHH
T ss_pred             CCCeECCCCCCccCChHHHHHHHH-hc---CCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHH
Confidence            345999999999999999999998 56   8899999999999999999999999999997  999998 9999999999


Q ss_pred             HHHhhh-cccc
Q psy15165        575 LKNHKQ-KCSV  584 (606)
Q Consensus       575 L~~H~~-~h~~  584 (606)
                      |..|++ .|.+
T Consensus        81 L~~H~~~~H~~   91 (95)
T 2yt9_A           81 LNGHIKQVHSG   91 (95)
T ss_dssp             HHHHHHHTSCC
T ss_pred             HHHHHHHhcCC
Confidence            999997 6654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.68  E-value=2.9e-17  Score=129.44  Aligned_cols=82  Identities=34%  Similarity=0.562  Sum_probs=77.0

Q ss_pred             cccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHhhhcc
Q psy15165        444 SNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGI  523 (606)
Q Consensus       444 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~~  523 (606)
                      ||.|.+|++.|.....|..|++.|.++++                            |.|+.|++.|.+...|..|++ .
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------~~C~~C~~~f~~~~~l~~H~~-~   51 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRP----------------------------YPCQYCGKRFHQKSDMKKHTF-I   51 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCC----------------------------EECSSSCCEESSHHHHHHHHH-H
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCC----------------------------eeCCcCChhhCCHHHHHHHHH-H
Confidence            58999999999999999999999988777                            999999999999999999998 5


Q ss_pred             cccCCCCccccccccchhccChhhHHHHHhhhcC
Q psy15165        524 HMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       524 H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      |   .++++|.|+.|++.|.+...|..|+++|+|
T Consensus        52 h---~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           52 H---TGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             H---HTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             h---cCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            6   789999999999999999999999999986

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=4e-17  Score=135.84  Aligned_cols=92  Identities=15%  Similarity=0.180  Sum_probs=83.9

Q ss_pred             hcCCCCCcccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHH
Q psy15165        437 NHHGYEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTEL  516 (606)
Q Consensus       437 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L  516 (606)
                      .|.+ +++|.|.+|++.|.....|..|++.|.  ++                            |.|++|++.|.....|
T Consensus        10 ~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~----------------------------~~C~~C~~~f~~~~~l   58 (107)
T 1wjp_A           10 PVEN-KEVYQCRLCNAKLSSLLEQGSHERLCR--NA----------------------------AVCPYCSLRFFSPELK   58 (107)
T ss_dssp             CCCC-CCCCBCTTTCCBCSSHHHHHHHHHHHH--HS----------------------------BCCTTTCCCBSSHHHH
T ss_pred             ccCC-CcCeECCCCCCccCCHHHHHHHHHHCC--CC----------------------------ccCCCCCCccCCHHHH
Confidence            3444 889999999999999999999999983  33                            8999999999999999


Q ss_pred             HHhhhcccccCCCCccccccccchhccChhhHHHHHh-hhcCCCCcccc
Q psy15165        517 SNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMR-THTNEKPYKCV  564 (606)
Q Consensus       517 ~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~-~H~~~kp~~C~  564 (606)
                      ..|++  |   +++++|.|++|++.|.+...|.+|++ +|++++||.|.
T Consensus        59 ~~H~~--H---~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           59 QEHES--K---CEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHH--H---CSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHH--c---CCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            99984  6   89999999999999999999999997 99999999983

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=9.7e-17  Score=135.42  Aligned_cols=97  Identities=22%  Similarity=0.310  Sum_probs=83.4

Q ss_pred             HhcCCCCCcccCCCCCCccCCHHHHHHHHHH--hcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcC--C
Q psy15165        436 TNHHGYEVSNLCYICGFFSAKRSTLAHHIQD--HIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTF--P  511 (606)
Q Consensus       436 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~--h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f--~  511 (606)
                      +.|++ +++|.|.+|++.|.....|..|++.  |.+.++                           .+.|++|++.|  .
T Consensus        12 ~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~---------------------------~~~C~~C~~~f~f~   63 (115)
T 2dmi_A           12 SIFTG-ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDN---------------------------HETDNNNPKRWSKP   63 (115)
T ss_dssp             CCCCC-CCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSC---------------------------CCCCCCCCSCCSSC
T ss_pred             eeeCC-CCCEECCccCchhcCHHHHHHHHHHhCccccCC---------------------------CccCCCCCcccccc
Confidence            34455 8999999999999999999999998  544333                           15699999999  9


Q ss_pred             ChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        512 RKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       512 ~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      ....|..|++ +|   ++++||.|++|++.|.+...|.+|+++|+......++
T Consensus        64 ~~~~l~~H~~-~H---~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           64 RKRSLLEMEG-KE---DAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             CCCCCCCCCC-SC---CCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             cHHHHHHHhh-cc---CCCcceECCCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            9999999998 56   8999999999999999999999999999887666554

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.64  E-value=2e-16  Score=126.66  Aligned_cols=80  Identities=28%  Similarity=0.604  Sum_probs=75.8

Q ss_pred             cccCCC--CCCcCCChHHHHHhhhcccccCCCCcccccc--ccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhh
Q psy15165        500 FLQCPH--CPKTFPRKTELSNHIKGIHMKHELRQTFVCE--YCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVS  574 (606)
Q Consensus       500 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~--~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~  574 (606)
                      .|.|+.  |++.|.+...|..|++ .|   .++++|.|+  .|++.|.+...|..|+++|++++||.|. |++.|.+.+.
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   80 (89)
T 2wbs_A            5 THTCDYAGCGKTYTKSSHLKAHLR-TH---TGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDH   80 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHT-TS---CSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHH
T ss_pred             CeeCCCCCCCCcCCCHHHHHHHHH-hc---CCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHH
Confidence            399999  9999999999999998 56   889999997  5999999999999999999999999998 9999999999


Q ss_pred             HHHhhhccc
Q psy15165        575 LKNHKQKCS  583 (606)
Q Consensus       575 L~~H~~~h~  583 (606)
                      |..|+++|.
T Consensus        81 l~~H~~~H~   89 (89)
T 2wbs_A           81 LALHMKRHF   89 (89)
T ss_dssp             HHHHGGGGC
T ss_pred             HHHHHHhhC
Confidence            999999984

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.63  E-value=3.2e-16  Score=128.57  Aligned_cols=81  Identities=27%  Similarity=0.591  Sum_probs=76.4

Q ss_pred             cccCCC--CCCcCCChHHHHHhhhcccccCCCCcccccc--ccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhh
Q psy15165        500 FLQCPH--CPKTFPRKTELSNHIKGIHMKHELRQTFVCE--YCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVS  574 (606)
Q Consensus       500 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~--~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~  574 (606)
                      .|.|+.  |++.|.....|..|++ .|   .++++|.|.  .|++.|.+...|.+|+++|++++||.|. |++.|.+...
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLR-TH---TGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHH-HH---SCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHH
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHH-Hh---CCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHH
Confidence            499997  9999999999999998 56   889999996  5999999999999999999999999998 9999999999


Q ss_pred             HHHhhhcccc
Q psy15165        575 LKNHKQKCSV  584 (606)
Q Consensus       575 L~~H~~~h~~  584 (606)
                      |..|+++|++
T Consensus        91 l~~H~~~H~~  100 (100)
T 2ebt_A           91 LALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhCC
Confidence            9999999974

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=4.2e-16  Score=126.52  Aligned_cols=87  Identities=26%  Similarity=0.540  Sum_probs=79.0

Q ss_pred             CCCcccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHhh
Q psy15165        441 YEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHI  520 (606)
Q Consensus       441 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~  520 (606)
                      ++++|.|.+|++.|.....|..|++.|+++++                            |.|++|++.|.+...|..|+
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------~~C~~C~~~f~~~~~l~~H~   55 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKP----------------------------YSCPVCGLRFKRKDRMSYHV   55 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCS----------------------------EECSSSCCEESCHHHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCC----------------------------CcCCCCCCccCCHHHHHHHH
Confidence            37899999999999999999999999987766                            99999999999999999999


Q ss_pred             hcccccCCCC--ccccccccchhccChhhHHHHHh-hhcCCC
Q psy15165        521 KGIHMKHELR--QTFVCEYCNKEFTFLQYLKRHMR-THTNEK  559 (606)
Q Consensus       521 ~~~H~~~~~~--k~y~C~~C~k~f~~~~~L~~H~~-~H~~~k  559 (606)
                      + .|   .++  ++|.|++|++.|.+...|..|++ +|+++.
T Consensus        56 ~-~h---~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           56 R-SH---DGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             H-HH---CCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCCS
T ss_pred             H-Hh---cCCCCCceECCCccchhCCHHHHHHHHHHhcCCCC
Confidence            8 55   554  89999999999999999999996 788753

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.61  E-value=1.8e-16  Score=115.11  Aligned_cols=58  Identities=28%  Similarity=0.438  Sum_probs=54.1

Q ss_pred             CccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        498 GFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       498 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      +++|.|++||++|...+.|..|++ +|   ++++||.|++||++|.+.+.|.+|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~-~H---t~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRR-AH---LGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHH-HH---HTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHH-Hh---CCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            455999999999999999999998 67   99999999999999999999999999999974

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=9e-16  Score=128.29  Aligned_cols=84  Identities=29%  Similarity=0.518  Sum_probs=78.8

Q ss_pred             CCCcccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHhh
Q psy15165        441 YEVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHI  520 (606)
Q Consensus       441 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~  520 (606)
                      ++++|.| .|++.|.....|..|++.|.+.++                            |.|++|++.|.+...|..|+
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~----------------------------~~C~~C~~~f~~~~~l~~H~   57 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP----------------------------YGCGVCGKKFKMKHHLVGHM   57 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHHHSCCCS----------------------------EECTTTSCEESSSHHHHHHH
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHHcCCCcC----------------------------ccCCCCCcccCCHHHHHHHH
Confidence            3899999 999999999999999999987776                            99999999999999999999


Q ss_pred             hcccccCCCCccccccccchhccChhhHHHHHhhhcC
Q psy15165        521 KGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       521 ~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      + .|   .++++|.|++|++.|.+...|.+|+++|++
T Consensus        58 ~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           58 K-IH---TGIKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             T-TT---CCCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             H-Hc---CCCCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence            8 56   889999999999999999999999999874

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.60  E-value=5.4e-17  Score=129.73  Aligned_cols=82  Identities=24%  Similarity=0.414  Sum_probs=76.9

Q ss_pred             cccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHh
Q psy15165        500 FLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNH  578 (606)
Q Consensus       500 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H  578 (606)
                      +|.|++|++.|.+...|..|++ .|   ++++||.|+.|++.|.+...|..|+++|++ .+|.|. |++.|.+...|..|
T Consensus         3 ~~~C~~C~k~f~~~~~L~~H~~-~H---~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H   77 (88)
T 1llm_C            3 PFQCRICMRNFSRSDHLTTHIR-TH---TGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENE   77 (88)
T ss_dssp             CEECTTTCCEESCHHHHHHHHH-HH---HCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCccCCHHHHHHHHH-Hc---CCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHH
Confidence            4999999999999999999998 56   889999999999999999999999999995 899998 99999999999999


Q ss_pred             hhcccccc
Q psy15165        579 KQKCSVFL  586 (606)
Q Consensus       579 ~~~h~~~~  586 (606)
                      ++.+++..
T Consensus        78 ~~~~h~~~   85 (88)
T 1llm_C           78 VARLKKLV   85 (88)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHh
Confidence            99988653

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=1.4e-15  Score=118.08  Aligned_cols=63  Identities=35%  Similarity=0.604  Sum_probs=45.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhh
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTES  590 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c  590 (606)
                      .++++|.|++|++.|.....|.+|+++|++++||.|. |++.|.+...|..|+++|++++||.|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            5566777777777777777777777777777777776 77777777777777777777777766

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.57  E-value=3.5e-15  Score=122.26  Aligned_cols=84  Identities=30%  Similarity=0.563  Sum_probs=78.3

Q ss_pred             CCcccCCC--CCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCC--CCCCcCCChHHHH
Q psy15165        442 EVSNLCYI--CGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCP--HCPKTFPRKTELS  517 (606)
Q Consensus       442 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~--~C~~~f~~~~~L~  517 (606)
                      .++|.|.+  |++.|.....|..|++.|.++++                            |.|+  .|++.|.....|.
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------~~C~~~~C~~~f~~~~~l~   64 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKP----------------------------YKCTWEGCDWRFARSDELT   64 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCC----------------------------EECCSSSCCCEESSHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCC----------------------------eeCCCCCCCCccCCHHHHH
Confidence            67899997  99999999999999999987777                            8996  6999999999999


Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcC
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      .|++ .|   +++++|.|++|++.|.+...|..|+++|+|
T Consensus        65 ~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           65 RHYR-KH---TGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HHHH-HH---TSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             HHHH-Hh---CCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            9998 56   889999999999999999999999999985

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=6.1e-16  Score=126.21  Aligned_cols=83  Identities=20%  Similarity=0.221  Sum_probs=73.1

Q ss_pred             CcCCChHHHHHhhhcccccCCCCccccccccchhcc-ChhhHHHHHhhhcC-CCCcccc-cCccCCchhhHHHhhhcccc
Q psy15165        508 KTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFT-FLQYLKRHMRTHTN-EKPYKCV-CGLGFNFNVSLKNHKQKCSV  584 (606)
Q Consensus       508 ~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~-~~~~L~~H~~~H~~-~kp~~C~-C~~~F~~~~~L~~H~~~h~~  584 (606)
                      -.+.....+..|++ +|   +++++|.|.+|++.|. ....|.+|+++|++ ++||.|. |++.|.+...|..|+++|++
T Consensus         4 ~s~~~~~~~~~h~~-~h---~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~   79 (98)
T 2gqj_A            4 GSSGPGGPEEQWQR-AI---HERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS   79 (98)
T ss_dssp             CCCCCCCSCSHHHH-TT---TTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred             CCCCCCCcHHHHHH-Hh---ccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcC
Confidence            35666777889988 56   8899999999999999 99999999999999 9999998 99999999999999999999


Q ss_pred             ccchhhcccc
Q psy15165        585 FLLTESMNSV  594 (606)
Q Consensus       585 ~~~~~c~~~~  594 (606)
                      ++|+......
T Consensus        80 ~kp~~~~~~~   89 (98)
T 2gqj_A           80 AKPSDAEASE   89 (98)
T ss_dssp             SCSSCCCCCC
T ss_pred             CCCCCCCCCc
Confidence            9986544433

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=2.2e-15  Score=119.67  Aligned_cols=82  Identities=26%  Similarity=0.370  Sum_probs=37.0

Q ss_pred             hhcccccccCCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cC
Q psy15165        488 INGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CG  566 (606)
Q Consensus       488 l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~  566 (606)
                      |..|++++.+..+|.|++|++.|.....|..|++..|.....+++|.|.+|++.|.+...|..|+++|++++++.|. |+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            34444443333345555555555555555555442221000114455555555555555555555555555555554 44


Q ss_pred             ccC
Q psy15165        567 LGF  569 (606)
Q Consensus       567 ~~F  569 (606)
                      .+|
T Consensus        83 ~~~   85 (86)
T 1x6h_A           83 PSS   85 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            443

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.54  E-value=3.3e-15  Score=119.54  Aligned_cols=83  Identities=29%  Similarity=0.579  Sum_probs=76.8

Q ss_pred             CCcccCCC--CCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCC--CCCCcCCChHHHH
Q psy15165        442 EVSNLCYI--CGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCP--HCPKTFPRKTELS  517 (606)
Q Consensus       442 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~--~C~~~f~~~~~L~  517 (606)
                      ..+|.|.+  |++.|.....|..|++.|.++++                            |.|+  .|++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------~~C~~~~C~~~f~~~~~l~   54 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP----------------------------YHCDWDGCGWKFARSDELT   54 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCC----------------------------EECCSTTTCCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCC----------------------------cCCCCCCCCCccCCHHHHH
Confidence            56899999  99999999999999999877766                            8997  6999999999999


Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhc
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                      .|++ .|   +++++|.|+.|++.|.+...|..|+++|.
T Consensus        55 ~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           55 RHYR-KH---TGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             HHHH-HH---HCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             HHHH-Hc---CCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            9998 66   88999999999999999999999999984

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=7.5e-15  Score=116.59  Aligned_cols=79  Identities=22%  Similarity=0.402  Sum_probs=71.8

Q ss_pred             HHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCC----CCcccc-cCccCCchhhHHHhhhccccccchh
Q psy15165        515 ELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNE----KPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTE  589 (606)
Q Consensus       515 ~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~----kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~  589 (606)
                      .|.+|++ +|   +++++|.|.+|++.|.+...|.+|+++|++.    +||.|. |++.|.+...|..|+++|++.+++.
T Consensus         2 s~~~H~~-~H---~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~   77 (86)
T 1x6h_A            2 SSGSSGR-TH---TGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE   77 (86)
T ss_dssp             TTTCCST-TC---CCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCC
T ss_pred             Ccccccc-ee---cCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcc
Confidence            4567888 56   8999999999999999999999999988775    799998 9999999999999999999999999


Q ss_pred             hccccCCC
Q psy15165        590 SMNSVSGA  597 (606)
Q Consensus       590 c~~~~~~~  597 (606)
                      |..+++++
T Consensus        78 ~~~~~~~~   85 (86)
T 1x6h_A           78 GENSGPSS   85 (86)
T ss_dssp             CCCCCCCC
T ss_pred             cCCCCCCC
Confidence            99887653

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=5e-15  Score=115.51  Aligned_cols=70  Identities=30%  Similarity=0.612  Sum_probs=63.3

Q ss_pred             CccccCCC--CCCcCCChHHHHHhhhcccccCCCCccccccc--cchhccChhhHHHHHhhhcCCCCcccc-cCccCC
Q psy15165        498 GFFLQCPH--CPKTFPRKTELSNHIKGIHMKHELRQTFVCEY--CNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFN  570 (606)
Q Consensus       498 ~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~  570 (606)
                      ..+|.|..  |++.|.+...|..|++..|   +++++|.|++  |++.|.+...|.+|+++|++++||.|. |+++|.
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H---~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQH---IHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGG---GSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHh---CCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            33488876  9999999999999998556   8899999999  999999999999999999999999998 999984

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=4.5e-15  Score=114.18  Aligned_cols=61  Identities=33%  Similarity=0.601  Sum_probs=50.1

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccch
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLT  588 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~  588 (606)
                      .++++|.|..|++.|.+...|..|+++|++++||.|. |++.|.+...|..|+++|++++||
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            6677888888888888888888888888888888887 888888888888888888888775

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.52  E-value=4.9e-15  Score=117.35  Aligned_cols=77  Identities=27%  Similarity=0.586  Sum_probs=72.5

Q ss_pred             cccC--CCCCCcCCChHHHHHhhhcccccCCCCccccccc--cchhccChhhHHHHHhhhcCCCCccc-c---cCccCCc
Q psy15165        500 FLQC--PHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEY--CNKEFTFLQYLKRHMRTHTNEKPYKC-V---CGLGFNF  571 (606)
Q Consensus       500 ~~~C--~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C-~---C~~~F~~  571 (606)
                      +|.|  +.|++.|.+...|..|++ .|   .++++|.|++  |++.|.+...|.+|+++|++   |.| .   |++.|.+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~   73 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQF-SH---TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKT   73 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH-HH---HTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHH-Hh---CCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCC
Confidence            3889  999999999999999998 66   7899999999  99999999999999999999   999 5   9999999


Q ss_pred             hhhHHHhhhccc
Q psy15165        572 NVSLKNHKQKCS  583 (606)
Q Consensus       572 ~~~L~~H~~~h~  583 (606)
                      ...|..|+++||
T Consensus        74 ~~~l~~H~~~hh   85 (85)
T 2j7j_A           74 WTLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHHHCC
T ss_pred             HHHHHHHHHhcC
Confidence            999999999986

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=4.3e-15  Score=120.69  Aligned_cols=71  Identities=17%  Similarity=0.250  Sum_probs=56.4

Q ss_pred             CCCCccccccccchhccChhhHHHHHh-hh---cCCCCcccc-cCccCCchhhHHHh-hhccccccchhhccccCCC
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMR-TH---TNEKPYKCV-CGLGFNFNVSLKNH-KQKCSVFLLTESMNSVSGA  597 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~-~H---~~~kp~~C~-C~~~F~~~~~L~~H-~~~h~~~~~~~c~~~~~~~  597 (606)
                      .+|++||.|+.||+.|.+.+.|.+|++ +|   ++++||.|. ||++|.+.+.|..| +++|++++||.|.......
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~~~   89 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKRNN   89 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCCSS
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccCCC
Confidence            367888888888888888888888887 48   567888887 88888888888888 7888888888887644333

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.51  E-value=2.7e-15  Score=119.72  Aligned_cols=83  Identities=18%  Similarity=0.258  Sum_probs=75.6

Q ss_pred             CCcccCCCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcCCChHHHHHhhh
Q psy15165        442 EVSNLCYICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIK  521 (606)
Q Consensus       442 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~  521 (606)
                      +++|.|++|++.|...+.|..|+++|+++++                            |.|+.|++.|.....|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~----------------------------~~C~~C~k~f~~~~~L~~H~~   52 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKP----------------------------FACDICGRKFARSDERKRHRD   52 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCC----------------------------EECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCC----------------------------ccCCCCCCccCCHHHHHHHHH
Confidence            4689999999999999999999999988877                            999999999999999999998


Q ss_pred             cccccCCCCccccccccchhccChhhHHHHHhhhcC
Q psy15165        522 GIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       522 ~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      ..|     ..+|.|+.|++.|.+...|..|++.+++
T Consensus        53 ~h~-----~~~~~c~~C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           53 IQH-----ILPILEDKVEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             HHT-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhC-----CCcchHHHHHHHHHHHhhhHHHHHHHHH
Confidence            433     3789999999999999999999987653

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.8e-14  Score=111.65  Aligned_cols=64  Identities=28%  Similarity=0.526  Sum_probs=59.8

Q ss_pred             cCCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        496 HSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       496 h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      .+..+|.|++|++.|.....|..|++ .|   +++++|.|++|++.|.....|.+|+++|++++||.|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRR-TH---TGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHT-TT---CCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHH-Hc---CCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            44556999999999999999999998 56   889999999999999999999999999999999998

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=9.5e-15  Score=110.96  Aligned_cols=62  Identities=21%  Similarity=0.363  Sum_probs=56.6

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccch
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLT  588 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~  588 (606)
                      ++++++|.|.+|++.|.+...|.+|+++|++++||.|. |++.|.+...|..|+++|++++|.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            47889999999999999999999999999999999998 999999999999999999988763

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.7e-14  Score=116.59  Aligned_cols=77  Identities=16%  Similarity=0.263  Sum_probs=69.1

Q ss_pred             CCcCCChHHHHHhhhcccccCCCCccccccccchhc-cChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHh-hhccc
Q psy15165        507 PKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEF-TFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNH-KQKCS  583 (606)
Q Consensus       507 ~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f-~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H-~~~h~  583 (606)
                      ...|.....|..|++ .|   .++++|.|+.|++.| .+...|..|+++| +++||.|. |+++|.+...|..| +++|+
T Consensus        13 ~~~~~~~~~~~~~~~-~~---~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYL-EI---VDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             CCSSCTTCHHHHHHH-HH---HHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             CCCCCCchHHHHHHH-Hh---cCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence            557788899999988 45   788999999999999 9999999999999 99999998 99999999999999 88888


Q ss_pred             cccch
Q psy15165        584 VFLLT  588 (606)
Q Consensus       584 ~~~~~  588 (606)
                      +...+
T Consensus        88 ~~p~~   92 (96)
T 2ctd_A           88 SLPSG   92 (96)
T ss_dssp             CCSSC
T ss_pred             CCCCC
Confidence            65444

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.47  E-value=1.6e-15  Score=130.85  Aligned_cols=79  Identities=23%  Similarity=0.279  Sum_probs=68.6

Q ss_pred             ccCCCCCC------cCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchh
Q psy15165        501 LQCPHCPK------TFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNV  573 (606)
Q Consensus       501 ~~C~~C~~------~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~  573 (606)
                      +.|++|++      .|.....|..|++  |   ++++||.|++||+.|.....|..|+++|  ++||.|. |+++|.+.+
T Consensus        42 ~~c~~~~~~~~~~~~~~~~~~l~~h~~--h---~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~  114 (129)
T 2wbt_A           42 LIRAIVKTLIHNPQLLDESSYLYRLLA--S---KAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTD  114 (129)
T ss_dssp             HHHHHHHHHHHCGGGTTTHHHHHHHHH--H---HHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHH
T ss_pred             ccchhhhcccCCCcccCCHHHHHHHHH--h---CCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHH
Confidence            55555554      4457788888874  5   7899999999999999999999999999  8999998 999999999


Q ss_pred             hHHHhhhcccccc
Q psy15165        574 SLKNHKQKCSVFL  586 (606)
Q Consensus       574 ~L~~H~~~h~~~~  586 (606)
                      .|..|+++|++..
T Consensus       115 ~l~~H~~~h~~~~  127 (129)
T 2wbt_A          115 SALDHVCKKHNIC  127 (129)
T ss_dssp             HHHHHHHHTTCCC
T ss_pred             HHHHHHHHHCCcc
Confidence            9999999999864

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=2.6e-14  Score=109.20  Aligned_cols=61  Identities=38%  Similarity=0.648  Sum_probs=54.5

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccc
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLL  587 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~  587 (606)
                      |+++++|.|++|++.|.....|..|+++|++++||.|. |++.|.+...|..|+++|+++.+
T Consensus         9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             cCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            38889999999999999999999999999999999998 99999999999999999987643

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.46  E-value=2.6e-14  Score=103.64  Aligned_cols=56  Identities=39%  Similarity=0.664  Sum_probs=46.6

Q ss_pred             CCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhcccc
Q psy15165        529 LRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSV  584 (606)
Q Consensus       529 ~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~  584 (606)
                      |++||.|++|++.|.+...|..|+++|++++||.|. |+++|.+...|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999998 99999999999999998874

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.46  E-value=4.8e-14  Score=111.55  Aligned_cols=78  Identities=27%  Similarity=0.461  Sum_probs=72.5

Q ss_pred             cccC--CCCCCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCC--CCCcCCChHHHHHh
Q psy15165        444 SNLC--YICGFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPH--CPKTFPRKTELSNH  519 (606)
Q Consensus       444 ~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~--C~~~f~~~~~L~~H  519 (606)
                      ||.|  +.||+.|...+.|..|+++|.++++                            |.|+.  |++.|.+...|..|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~----------------------------~~C~~~~C~~~f~~~~~l~~H   52 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP----------------------------YECPHEGCDKRFSLPSRLKRH   52 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCC----------------------------EECCSTTCCCEESSHHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCC----------------------------eeCCCCCCcCccCCHHHHHHH
Confidence            6889  9999999999999999999988777                            99988  99999999999999


Q ss_pred             hhcccccCCCCccccccc---cchhccChhhHHHHHhhhc
Q psy15165        520 IKGIHMKHELRQTFVCEY---CNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       520 ~~~~H~~~~~~k~y~C~~---C~k~f~~~~~L~~H~~~H~  556 (606)
                      ++ .|   ++   |.|..   |++.|.+...|..|+++|+
T Consensus        53 ~~-~h---~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           53 EK-VH---AG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             HH-HH---HS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             HH-Hh---CC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            98 56   44   99999   9999999999999999985

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=3.4e-14  Score=115.42  Aligned_cols=72  Identities=21%  Similarity=0.320  Sum_probs=61.8

Q ss_pred             cCCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHH-HhhhcCCCCcccc-cCc
Q psy15165        496 HSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRH-MRTHTNEKPYKCV-CGL  567 (606)
Q Consensus       496 h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H-~~~H~~~kp~~C~-C~~  567 (606)
                      .++.+|.|+.|++.|.....|..|++..|...++++||.|+.||++|.....|..| +++|+|++||.|. +..
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            34556999999999999999999997446221468999999999999999999999 8999999999995 543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.45  E-value=4.6e-14  Score=110.43  Aligned_cols=58  Identities=19%  Similarity=0.353  Sum_probs=44.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhh-ccccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQ-KCSVF  585 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~-~h~~~  585 (606)
                      ...++|.|++||+.|.+...|.+|+++|++++||.|. |+++|.+...|.+|++ .|+++
T Consensus        24 ~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           24 ASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            5567788888888888888888888888888888887 8888888888888864 45443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=5.2e-14  Score=109.36  Aligned_cols=67  Identities=24%  Similarity=0.401  Sum_probs=58.5

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcC---CCCcccc-cCccCCchhhHHHhhh-ccccccchhhccc
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTN---EKPYKCV-CGLGFNFNVSLKNHKQ-KCSVFLLTESMNS  593 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~---~kp~~C~-C~~~F~~~~~L~~H~~-~h~~~~~~~c~~~  593 (606)
                      |++++||.|.+|++.|.+...|.+|+++|++   ++||.|. |++.|.+...|..|++ .|.+.+|.....+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~~   73 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESS   73 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSSSC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCccccC
Confidence            4899999999999999999999999999996   8999998 9999999999999995 5556666554443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=8.8e-14  Score=108.36  Aligned_cols=72  Identities=29%  Similarity=0.635  Sum_probs=66.4

Q ss_pred             CCcceeccc--CccccCCHHHHHHHHhccccccCCCCcccccc--cccccCchHHHHhhhhhcCCCCccccCcchhccC
Q psy15165        334 SGQYHVCPH--CGKKFTRKAELQLHIKGIHLKHQLEKTYICEY--CHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFN  408 (606)
Q Consensus       334 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~  408 (606)
                      +.++|.|..  |++.|.+...|..|++.   .|.++++|.|++  |++.|.....|..|+++|++++||.|+.|+++|.
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~---~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKY---QHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHH---GGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHH---HhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            347899987  99999999999999973   377899999999  9999999999999999999999999999999984

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.43  E-value=1.1e-13  Score=106.24  Aligned_cols=61  Identities=33%  Similarity=0.653  Sum_probs=56.8

Q ss_pred             CCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCc
Q psy15165        497 SGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPY  561 (606)
Q Consensus       497 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~  561 (606)
                      +..+|.|+.|++.|.....|..|++ .|   +++++|.|.+|++.|.+...|.+|+++|++++||
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~-~H---~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKT-VH---TGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHH-HH---CCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHH-Hc---CCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3445999999999999999999998 66   8899999999999999999999999999999997

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.42  E-value=4.1e-14  Score=121.85  Aligned_cols=52  Identities=33%  Similarity=0.581  Sum_probs=43.7

Q ss_pred             ccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCC
Q psy15165        501 LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      |.|++||+.|.....|..|++ .|     ++||.|++|++.|.+...|.+|+++|+|.
T Consensus        75 ~~C~~C~k~f~~~~~l~~H~~-~H-----~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           75 FVCPLCLMPFSSSVSLKQHIR-YT-----EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             EECTTTCCEESSHHHHHHHHH-HT-----CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             eECCCCCcccCCHhHHHHHHH-HC-----CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            888888888888888888887 44     67788888888888888888888888875

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.42  E-value=1.1e-13  Score=100.20  Aligned_cols=55  Identities=31%  Similarity=0.673  Sum_probs=40.6

Q ss_pred             cccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      ||.|+.|++.|.+...|..|+++|++++||.|. |+++|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            567777777777777777777777777777776 7777777777777777776653

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=5.3e-14  Score=109.04  Aligned_cols=66  Identities=21%  Similarity=0.392  Sum_probs=52.9

Q ss_pred             HHHhhhcccccCCCCccccccccchhccChhhHHHHHh-hhcCC-CCcccc-cCccCCchhhHHHhhhccccc
Q psy15165        516 LSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMR-THTNE-KPYKCV-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       516 L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~-~H~~~-kp~~C~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      |.+|++ +|   ++++||.|++|++.|.+...|..|++ .|+++ +||.|. |++.|.+...|..|+++|++.
T Consensus         3 ~~~H~~-~H---~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGR-TH---SGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCC-CC---SCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCcccc-cc---CCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            456776 45   78888888888888888888888886 57764 788887 888888888888888887654

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=3.4e-14  Score=115.78  Aligned_cols=72  Identities=19%  Similarity=0.339  Sum_probs=61.0

Q ss_pred             hhcccccccCCccccCCCCCCcCC-ChHHHHHhhhcccccCCC-CccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        488 INGHIKDKHSGFFLQCPHCPKTFP-RKTELSNHIKGIHMKHEL-RQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       488 l~~H~~~~h~~~~~~C~~C~~~f~-~~~~L~~H~~~~H~~~~~-~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      +..|++.+.+..+|.|++|++.|. ....|..|++ .|   .+ +++|.|.+|++.|.+...|.+|+++|++++|+.-
T Consensus        12 ~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~-~h---~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           12 EEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHME-VC---QKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             CSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHH-HH---HHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             HHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHH-HH---cCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            344444433444499999999999 9999999998 56   66 8999999999999999999999999999998765

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=7.2e-14  Score=104.65  Aligned_cols=59  Identities=27%  Similarity=0.497  Sum_probs=52.4

Q ss_pred             CCCCccccccccchhccChhhHHHHHhh-h-cCCCCcccc-cCccCCchhhHHHhhhccccc
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRT-H-TNEKPYKCV-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~-H-~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      |++++||.|+.|++.|.+...|..|+++ | ++++||.|. |+++|.+.+.|..|+++||+.
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~i   66 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI   66 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC-
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcCC
Confidence            3888999999999999999999999988 7 588999998 999999999999999998863

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=1.7e-13  Score=104.97  Aligned_cols=67  Identities=25%  Similarity=0.564  Sum_probs=57.4

Q ss_pred             HHHHHhhhcccccCCCCcccccc--ccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhccc
Q psy15165        514 TELSNHIKGIHMKHELRQTFVCE--YCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       514 ~~L~~H~~~~H~~~~~~k~y~C~--~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~  583 (606)
                      ..|..|+..+|   .++++|.|+  .|++.|.+...|.+|+++|++++||.|. |+++|.+...|..|+++|+
T Consensus         4 ~~~~~~~~~~~---~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            4 HPMNNLLNYVV---PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ----CTTSCCC---CCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccchhhccC---CCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            45666776555   889999997  5999999999999999999999999998 9999999999999999985

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=5e-13  Score=107.96  Aligned_cols=80  Identities=20%  Similarity=0.301  Sum_probs=67.1

Q ss_pred             CCccCCHHHHHHHHHHhcCCCCCcCccccccccchhhhhcccccccCCccccCCCCCCcC-CChHHHHHhhhcccccCCC
Q psy15165        451 GFFSAKRSTLAHHIQDHIQPRMKQKQICEICCAEVYHINGHIKDKHSGFFLQCPHCPKTF-PRKTELSNHIKGIHMKHEL  529 (606)
Q Consensus       451 ~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~c~~~~~~l~~H~~~~h~~~~~~C~~C~~~f-~~~~~L~~H~~~~H~~~~~  529 (606)
                      ...|...+.|..|++.|.++++                            |.|+.|++.| .....|..|++ +   | +
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~----------------------------~~C~~C~k~F~~~~~~L~~H~~-~---h-~   59 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGS----------------------------VSCPTCQAVGRKTIEGLKKHME-N---C-K   59 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSC----------------------------EECTTTCSCEESSHHHHHHHHH-H---H-C
T ss_pred             CCCCCCchHHHHHHHHhcCCCC----------------------------cCCCCCCCCcccCHHHHHHHHH-H---H-C
Confidence            3456667777888887766665                            9999999999 99999999998 3   4 7


Q ss_pred             CccccccccchhccChhhHHHH-HhhhcCCCCccc
Q psy15165        530 RQTFVCEYCNKEFTFLQYLKRH-MRTHTNEKPYKC  563 (606)
Q Consensus       530 ~k~y~C~~C~k~f~~~~~L~~H-~~~H~~~kp~~C  563 (606)
                      +++|.|.+|++.|.....|..| +++|+++..|.+
T Consensus        60 ~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           60 QEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             CCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             CCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            8999999999999999999999 999987654443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=5e-13  Score=97.84  Aligned_cols=55  Identities=44%  Similarity=0.739  Sum_probs=43.1

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhh-hccccc
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHK-QKCSVF  585 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~-~~h~~~  585 (606)
                      +||.|+.|++.|.+...|..|+++|++++||.|. |++.|.+...|..|+ +.|.+.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            4678888888888888888888888888888887 888888888888886 456543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=6.6e-13  Score=102.75  Aligned_cols=71  Identities=18%  Similarity=0.312  Sum_probs=60.8

Q ss_pred             hhhcccccccCCccccCCCCCCcCCChHHHHHhhhcccccCCCC-ccccccccchhccChhhHHHHHhhhcC-CCC
Q psy15165        487 HINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELR-QTFVCEYCNKEFTFLQYLKRHMRTHTN-EKP  560 (606)
Q Consensus       487 ~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~-k~y~C~~C~k~f~~~~~L~~H~~~H~~-~kp  560 (606)
                      .|..|++++.++.+|.|++|++.|.....|..|++..|   .++ ++|.|++|++.|.+...|..|+++|++ +.|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h---~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKH---TENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHS---SSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhc---CCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            35678888767777999999999999999999997556   654 899999999999999999999998654 455

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=6.3e-13  Score=100.76  Aligned_cols=61  Identities=26%  Similarity=0.499  Sum_probs=56.3

Q ss_pred             CCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCc
Q psy15165        497 SGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPY  561 (606)
Q Consensus       497 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~  561 (606)
                      ++.+|.|++|++.|.....|..|++ .|   +++++|.|++|++.|.+...|.+|+++|++++|.
T Consensus         6 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H---~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKAALRIHER-IH---CTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHG-GG---CCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHH-Hc---CCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            3445999999999999999999998 56   8899999999999999999999999999999875

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=6.7e-13  Score=101.23  Aligned_cols=65  Identities=26%  Similarity=0.410  Sum_probs=57.4

Q ss_pred             ccccccCCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        491 HIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       491 H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      +.+++.+..+|.|++|++.|.....|..|++ .|   .+++||.|++|++.|.+...|.+|+++|+++.
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~h---~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQR-VH---TGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHH-GG---GCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHH-hc---CCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3445445556999999999999999999998 56   88999999999999999999999999999874

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.34  E-value=8.4e-13  Score=103.21  Aligned_cols=60  Identities=30%  Similarity=0.600  Sum_probs=53.8

Q ss_pred             cCCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHH-hhhcCCC
Q psy15165        496 HSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHM-RTHTNEK  559 (606)
Q Consensus       496 h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~-~~H~~~k  559 (606)
                      .+.+.|.|++||+.|.+...|.+|++ +|   ++++||.|++|+++|.+...|.+|+ ++|+++.
T Consensus        24 ~~~~~h~C~~Cgk~F~~~~~L~~H~~-~H---~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           24 ASAECHLCPVCGESFASKGAQERHLR-LL---HAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCTTEECTTSCCEESSHHHHHHHHH-TT---SCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCEECCCCCCCcCcHHHHhhhhh-hc---cCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            34445999999999999999999998 56   8999999999999999999999997 5798874

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.31  E-value=1.4e-12  Score=94.39  Aligned_cols=56  Identities=27%  Similarity=0.570  Sum_probs=52.8

Q ss_pred             cccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        500 FLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       500 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      +|.|+.|++.|.+...|..|++ .|   +++++|.|++|++.|.+...|.+|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIR-TH---TDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH-HT---SSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHH-hc---CCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            3899999999999999999998 56   88999999999999999999999999999876

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=8.8e-13  Score=106.69  Aligned_cols=59  Identities=20%  Similarity=0.239  Sum_probs=29.4

Q ss_pred             ccccccchhccChhhHHHHHhh-hcCCCC--------cccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRT-HTNEKP--------YKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~-H~~~kp--------~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      |.|..|++.|.+...|.+|+++ |++++|        |.|. |+++|.+...|..|+++|++++||.|.
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4444444444444444444444 444444        5554 555555555555555555555555553

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=4.5e-14  Score=108.12  Aligned_cols=68  Identities=22%  Similarity=0.272  Sum_probs=37.7

Q ss_pred             hhhhcccccccCCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        486 YHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       486 ~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      ..|..|++.|.+..+|.|++|++.|.....|..           +++|.|+.|++.|.+...|..|+++|++++||.|.
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   71 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-----------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPS   71 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-----------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-----------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCC
Confidence            345555555444444666666666655544443           34555666666665555565665555555555554

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.28  E-value=1.6e-12  Score=93.99  Aligned_cols=55  Identities=24%  Similarity=0.480  Sum_probs=50.1

Q ss_pred             ccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcC
Q psy15165        499 FFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       499 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      .+|.|++|++.|.+...|..|++ .|   ++++||.|++|++.|.+...|..|+++|++
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLR-TH---TGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHH-HH---HCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCccCCCCcchhCChHHHHHHHH-Hc---CCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            35999999999999999999998 56   889999999999999999999999999974

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.28  E-value=3.3e-12  Score=103.23  Aligned_cols=62  Identities=27%  Similarity=0.274  Sum_probs=57.1

Q ss_pred             cccCCCCCCcCCChHHHHHhhhcccccCCCCcc--------ccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        500 FLQCPHCPKTFPRKTELSNHIKGIHMKHELRQT--------FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       500 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~--------y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      .|.|+.|++.|.....|..|++..|   +++++        |.|++|++.|.+...|.+|+++|++++||.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H---~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEH---VGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTT---TCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhc---cCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3889999999999999999998436   77777        99999999999999999999999999999993

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=3.9e-14  Score=108.44  Aligned_cols=71  Identities=18%  Similarity=0.168  Sum_probs=64.3

Q ss_pred             ChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhh
Q psy15165        512 RKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTES  590 (606)
Q Consensus       512 ~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c  590 (606)
                      +...|..|++ .|   .+++||.|++|++.|.+...|..       ++||.|. |++.|.+...|..|+++|++++||.|
T Consensus         2 ~~~~l~~H~~-~h---~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C   70 (73)
T 2ctu_A            2 SSGSSGKRQK-IH---LGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGP   70 (73)
T ss_dssp             CCCSCCCCCC-CC---CCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSC
T ss_pred             cchhHHHHHH-Hh---CCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCC
Confidence            3456888987 56   89999999999999999999887       7999998 99999999999999999999999999


Q ss_pred             ccc
Q psy15165        591 MNS  593 (606)
Q Consensus       591 ~~~  593 (606)
                      ..+
T Consensus        71 ~~C   73 (73)
T 2ctu_A           71 SSG   73 (73)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            753

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=4.2e-12  Score=94.85  Aligned_cols=60  Identities=18%  Similarity=0.456  Sum_probs=52.9

Q ss_pred             cCCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcC
Q psy15165        496 HSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       496 h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      .++.+|.|+.|++.|.+...|..|++..|.  ++++||.|+.|++.|.+...|..|+++|++
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~--~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            6 EGEHTYRCKVCSRVYTHISNFCRHYVTSHK--RNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHHHSS--SSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCCcceECCCCcchhCCHHHHHHHHHHHcC--CCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            344459999999999999999999984351  588999999999999999999999999986

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=1.1e-11  Score=90.60  Aligned_cols=55  Identities=29%  Similarity=0.671  Sum_probs=51.1

Q ss_pred             cccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHH-hhhcCC
Q psy15165        500 FLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHM-RTHTNE  558 (606)
Q Consensus       500 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~-~~H~~~  558 (606)
                      +|.|+.|++.|.+...|..|++ .|   +++++|.|+.|++.|.+...|..|+ ++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYR-SH---TNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHH-TT---TSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHH-Hh---CCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            4899999999999999999998 56   8899999999999999999999997 688875

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=7.9e-12  Score=95.48  Aligned_cols=67  Identities=33%  Similarity=0.651  Sum_probs=56.0

Q ss_pred             hhhhcccccccCCcc-ccCC--CCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhc
Q psy15165        486 YHINGHIKDKHSGFF-LQCP--HCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       486 ~~l~~H~~~~h~~~~-~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                      ..+..|+...+.+.. |.|+  .|++.|.....|..|++ .|   .++++|.|++|++.|.+...|.+|+++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIR-IH---TGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHH-HH---HCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHH-hh---CCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            345566666666555 9997  59999999999999998 66   88999999999999999999999999985

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.2e-11  Score=92.24  Aligned_cols=58  Identities=28%  Similarity=0.524  Sum_probs=39.7

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc--cCccCCchhhHHHhhhccccccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV--CGLGFNFNVSLKNHKQKCSVFLL  587 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~--C~~~F~~~~~L~~H~~~h~~~~~  587 (606)
                      .+++||.|+.|++.|. ...|..|+++ ++++||.|.  |+++|...+.|..|+++|.+..|
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            4566777777777777 7777777776 677777774  77777777777777776655443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1.8e-11  Score=94.79  Aligned_cols=66  Identities=26%  Similarity=0.364  Sum_probs=55.2

Q ss_pred             CCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHH-hhhcCCCCccc
Q psy15165        497 SGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHM-RTHTNEKPYKC  563 (606)
Q Consensus       497 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~-~~H~~~kp~~C  563 (606)
                      ++.+|.|++|++.|.....|..|++ .|....++++|.|.+|++.|.....|.+|+ +.|.+++|...
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHH-HHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHH-HhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            3344999999999999999999998 561111489999999999999999999999 56888877665

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.13  E-value=3.5e-11  Score=91.54  Aligned_cols=55  Identities=33%  Similarity=0.617  Sum_probs=48.4

Q ss_pred             CCCccccccc--cchhccChhhHHHHHhhhcCCCCccc--c-cCccCCchhhHHHhhhcc
Q psy15165        528 ELRQTFVCEY--CNKEFTFLQYLKRHMRTHTNEKPYKC--V-CGLGFNFNVSLKNHKQKC  582 (606)
Q Consensus       528 ~~~k~y~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C--~-C~~~F~~~~~L~~H~~~h  582 (606)
                      ...++|.|..  |++.|.....|.+|+++|++++||.|  . |++.|.....|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            5678899988  99999999999999999999999999  4 999999999999998876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.11  E-value=3.2e-11  Score=82.72  Aligned_cols=44  Identities=27%  Similarity=0.369  Sum_probs=35.6

Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +|++ +|   ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         2 ~H~~-~H---~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGS-SG---TGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CC---SSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCC-cc---CCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3555 44   7888888888888888888888888888888888886 6

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=4.1e-11  Score=85.34  Aligned_cols=46  Identities=28%  Similarity=0.584  Sum_probs=41.8

Q ss_pred             cCCCCccccccccchhccChhhHHHHHh-hhcCCCCcccc-cCccCCc
Q psy15165        526 KHELRQTFVCEYCNKEFTFLQYLKRHMR-THTNEKPYKCV-CGLGFNF  571 (606)
Q Consensus       526 ~~~~~k~y~C~~C~k~f~~~~~L~~H~~-~H~~~kp~~C~-C~~~F~~  571 (606)
                      .+++++||.|++|++.|.....|.+|++ +|++++||.|. |+++|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3488899999999999999999999997 89999999998 9999976

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.5e-11  Score=82.50  Aligned_cols=44  Identities=25%  Similarity=0.369  Sum_probs=34.0

Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +|++ +|   ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         2 ~H~~-~H---~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGS-SG---TGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCC-CC---SSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccC-Cc---CCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            3555 44   7788888888888888888888888888888888886 6

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.8e-11  Score=82.32  Aligned_cols=38  Identities=29%  Similarity=0.465  Sum_probs=30.7

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            8 TGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            7778888888888888888888888888888888886 6

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.6e-11  Score=82.43  Aligned_cols=44  Identities=27%  Similarity=0.329  Sum_probs=35.8

Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +|++ +|   ++++||.|++|++.|.+...|..|+++|++++||.|. |
T Consensus         2 ~H~~-~H---~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGS-SG---TGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CC---CSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCC-CC---CCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            3555 44   7888888888888888888888888888888888886 6

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.6e-11  Score=82.45  Aligned_cols=38  Identities=34%  Similarity=0.468  Sum_probs=28.7

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            8 TGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            6777777777777777777777777777777777775 5

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.8e-11  Score=82.31  Aligned_cols=44  Identities=27%  Similarity=0.303  Sum_probs=35.3

Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +|++ +|   ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         2 ~H~~-~H---~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGS-SG---TGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCS-CS---SCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcC-Cc---CCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3555 44   7888888888888888888888888888888888886 6

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.8e-11  Score=82.31  Aligned_cols=38  Identities=32%  Similarity=0.417  Sum_probs=31.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            8 TGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7788888888888888888888888888888888886 6

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.5e-11  Score=82.51  Aligned_cols=44  Identities=25%  Similarity=0.358  Sum_probs=36.3

Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +|++ +|   ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         2 ~H~~-~H---~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGS-SG---TGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCS-CS---SCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             Cccc-cc---CCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3555 44   7888888888888888888888888888888888886 6

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.08  E-value=3.5e-11  Score=82.49  Aligned_cols=38  Identities=26%  Similarity=0.377  Sum_probs=27.9

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            8 MGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            6677777777777777777777777777777777775 5

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.6e-11  Score=81.91  Aligned_cols=38  Identities=34%  Similarity=0.483  Sum_probs=31.6

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            8 TGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7788888888888888888888888888888888886 6

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.08  E-value=4e-11  Score=82.21  Aligned_cols=38  Identities=29%  Similarity=0.450  Sum_probs=30.9

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            8 TGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            7778888888888888888888888888888888886 5

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.7e-11  Score=81.87  Aligned_cols=44  Identities=23%  Similarity=0.335  Sum_probs=34.5

Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +|++ +|   ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         2 ~H~~-~H---~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGS-SG---TGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCC-CC---SSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCC-CC---CCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3555 44   7788888888888888888888888888888888886 6

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=4.5e-11  Score=81.06  Aligned_cols=38  Identities=34%  Similarity=0.541  Sum_probs=32.5

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++||+.|.+...|.+|+++|++++||.|. |
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            6 SGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7888888888888888888888888888888888886 6

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.08  E-value=3.3e-11  Score=82.62  Aligned_cols=38  Identities=29%  Similarity=0.421  Sum_probs=29.5

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+.+.|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            8 TGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7777777777777777777777777777777777775 5

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.2e-11  Score=82.10  Aligned_cols=38  Identities=32%  Similarity=0.455  Sum_probs=29.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            8 TGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            6777777777777777777777777777777777775 5

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.6e-11  Score=82.48  Aligned_cols=44  Identities=20%  Similarity=0.252  Sum_probs=35.7

Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +|++ +|   ++++||.|++||++|.+.+.|..|+++|++++||.|. |
T Consensus         2 ~H~~-~H---~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGS-SG---SGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCC-CC---SCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCC-CC---CCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4555 44   7888888888888888888888888888888888886 6

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.07  E-value=5.2e-11  Score=81.65  Aligned_cols=38  Identities=32%  Similarity=0.424  Sum_probs=31.8

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            8 TGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7788888888888888888888888888888888886 6

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.4e-11  Score=81.98  Aligned_cols=44  Identities=30%  Similarity=0.356  Sum_probs=35.7

Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +|++ +|   +++++|.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         2 ~H~~-~H---~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGS-SG---SGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CS---SSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcc-cC---CCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            3555 44   7888888888888888888888888888888888886 6

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.5e-11  Score=81.96  Aligned_cols=44  Identities=23%  Similarity=0.295  Sum_probs=35.7

Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +|++ +|   ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         2 ~H~~-~H---~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGS-SG---SGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCC-CS---CCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCcc-cc---CCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            3555 44   7888888888888888888888888888888888886 6

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=4.1e-11  Score=82.19  Aligned_cols=38  Identities=32%  Similarity=0.521  Sum_probs=30.3

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            8 SSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7777888888888888888888888888888888876 6

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5e-11  Score=81.73  Aligned_cols=44  Identities=25%  Similarity=0.412  Sum_probs=33.4

Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +|++ +|   +++++|.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         2 ~H~~-~H---~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGS-SG---TGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSC-TT---SSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             Cccc-CC---CCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3555 34   7778888888888888888888888888888888885 5

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4e-11  Score=82.24  Aligned_cols=44  Identities=27%  Similarity=0.393  Sum_probs=35.1

Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +|++ +|   ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         2 ~H~~-~H---~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGS-SG---TGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-SC---SCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCC-CC---CCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3555 44   7788888888888888888888888888888888886 6

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.7e-11  Score=81.83  Aligned_cols=38  Identities=32%  Similarity=0.460  Sum_probs=30.1

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            8 TGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7777888888888888888888888888888888875 5

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=4.2e-11  Score=82.10  Aligned_cols=38  Identities=26%  Similarity=0.469  Sum_probs=30.5

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            8 SGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7778888888888888888888888888888888886 6

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5e-11  Score=81.70  Aligned_cols=38  Identities=34%  Similarity=0.527  Sum_probs=28.6

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            8 TGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            6777777777777777777777777777777777775 5

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5e-11  Score=81.72  Aligned_cols=38  Identities=34%  Similarity=0.447  Sum_probs=29.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            8 TGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            6777777777777777777777777777777777775 5

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.6e-11  Score=81.89  Aligned_cols=38  Identities=32%  Similarity=0.410  Sum_probs=30.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            8 TGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7777888888888888888888888888888888875 5

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.1e-11  Score=81.26  Aligned_cols=38  Identities=34%  Similarity=0.420  Sum_probs=28.9

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            8 TGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            6777777777777777777777777777777777775 5

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.5e-11  Score=81.51  Aligned_cols=38  Identities=37%  Similarity=0.593  Sum_probs=30.5

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+.+.|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            8 TGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            7778888888888888888888888888888888886 6

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.9e-11  Score=81.77  Aligned_cols=44  Identities=23%  Similarity=0.264  Sum_probs=34.8

Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +|++ +|   ++++||.|++||+.|.+...|.+|+++|++++||.|. |
T Consensus         2 ~H~~-~H---~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGS-SG---TGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCC-CC---CCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcc-cC---CCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3555 44   7788888888888888888888888888888888886 6

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.6e-11  Score=81.47  Aligned_cols=38  Identities=39%  Similarity=0.672  Sum_probs=30.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            8 SGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            7777888888888888888888888888888888876 6

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.3e-11  Score=81.20  Aligned_cols=38  Identities=26%  Similarity=0.416  Sum_probs=28.4

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            8 SVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            6777777777777777777777777777777777775 5

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.7e-11  Score=82.39  Aligned_cols=38  Identities=34%  Similarity=0.464  Sum_probs=32.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            8 TGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            7888888888888888888888888888888888886 6

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.9e-11  Score=81.02  Aligned_cols=38  Identities=37%  Similarity=0.573  Sum_probs=28.9

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            8 AGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            6777777777777777777777777777777777775 5

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.6e-11  Score=81.46  Aligned_cols=43  Identities=30%  Similarity=0.386  Sum_probs=35.8

Q ss_pred             hhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        519 HIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       519 H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      |++ +|   +++++|.|++|++.|.+...|..|+++|++++||.|. |
T Consensus         3 h~~-~H---~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGS-SG---SGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSC-CC---CSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCC-cc---CCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            555 44   7888888888888888888888888888888888886 6

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.5e-11  Score=81.51  Aligned_cols=44  Identities=34%  Similarity=0.416  Sum_probs=32.7

Q ss_pred             HhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        518 NHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       518 ~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +|++ +|   +++++|.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         2 ~H~~-~H---~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGS-SG---SGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTT-CC---CCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             Cccc-CC---CCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3555 44   7777788888888888888888888788877888775 5

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.1e-11  Score=80.93  Aligned_cols=38  Identities=24%  Similarity=0.350  Sum_probs=32.6

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            8 TGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7888888888888888888888888888888888886 6

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=6.3e-11  Score=81.20  Aligned_cols=38  Identities=32%  Similarity=0.427  Sum_probs=29.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            8 TGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            6777777777777777777777777777777777775 5

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=6.2e-11  Score=88.39  Aligned_cols=57  Identities=19%  Similarity=0.283  Sum_probs=52.1

Q ss_pred             CccccCCCCCCcCCChHHHHHhhhcccccCCCCcccccc-ccchhccChhhHHHHHhhhcCCCC
Q psy15165        498 GFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCE-YCNKEFTFLQYLKRHMRTHTNEKP  560 (606)
Q Consensus       498 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~-~C~k~f~~~~~L~~H~~~H~~~kp  560 (606)
                      ..+|.|++|++.|. ...|..|++    . ++++||.|+ .||++|...+.|..|+++|...+|
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~----~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQY----Q-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHH----H-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCeeccccCCccC-HHHHHHHHH----H-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            34599999999999 999999998    2 689999999 999999999999999999988766

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=7.7e-11  Score=80.77  Aligned_cols=38  Identities=18%  Similarity=0.203  Sum_probs=32.4

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|..|+++|++++||.|. |
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7788888888888888888888888888888888886 6

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.04  E-value=6.1e-11  Score=81.27  Aligned_cols=38  Identities=29%  Similarity=0.545  Sum_probs=28.1

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            8 TGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            6677777777777777777777777777777777775 5

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.04  E-value=3.5e-11  Score=80.69  Aligned_cols=36  Identities=28%  Similarity=0.425  Sum_probs=26.4

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            6 SGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            667777777777777777777777777777777776

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7e-11  Score=80.96  Aligned_cols=38  Identities=26%  Similarity=0.432  Sum_probs=30.9

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            8 TGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             SSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            7778888888888888888888888888888888886 6

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.03  E-value=8.1e-11  Score=80.65  Aligned_cols=38  Identities=32%  Similarity=0.391  Sum_probs=31.3

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            8 AGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7788888888888888888888888888888888886 6

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.1e-11  Score=80.95  Aligned_cols=37  Identities=32%  Similarity=0.450  Sum_probs=25.9

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            8 TGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            6666777777777777777777777777777777764

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=8.9e-11  Score=80.43  Aligned_cols=38  Identities=32%  Similarity=0.429  Sum_probs=31.7

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            8 SGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            7788888888888888888888888888888888886 6

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.2e-11  Score=82.09  Aligned_cols=38  Identities=32%  Similarity=0.463  Sum_probs=27.4

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.+...|..|+++|++++||.|. |
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            8 TGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            6677777777777777777777777777777777775 5

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.9e-11  Score=81.77  Aligned_cols=36  Identities=28%  Similarity=0.526  Sum_probs=22.6

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            8 SGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            556666666666666666666666666666666665

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.03  E-value=2.5e-11  Score=86.49  Aligned_cols=50  Identities=18%  Similarity=0.210  Sum_probs=24.9

Q ss_pred             CcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCc
Q psy15165        508 KTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPY  561 (606)
Q Consensus       508 ~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~  561 (606)
                      +.|.....|..|++ .|   +++++|.|++||+.|...+.|..|+++|+|++||
T Consensus         4 k~~~~~~~l~~h~~-~H---~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRS-RS---QSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHH-HH---TSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHH-hc---CCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            34444445555544 33   4445555555555555555555555555555544

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1e-10  Score=80.16  Aligned_cols=38  Identities=26%  Similarity=0.292  Sum_probs=33.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            8 SGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            7888888888888888888888888888888888886 6

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=3.9e-11  Score=82.27  Aligned_cols=43  Identities=26%  Similarity=0.407  Sum_probs=40.9

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |+++|.+.+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            488999999999998 9999999999999999999999999975

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=1.7e-10  Score=78.62  Aligned_cols=40  Identities=18%  Similarity=0.350  Sum_probs=37.1

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cC
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CG  566 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~  566 (606)
                      |++++||.|++|++.|.....|.+|+++|++++||.|+ ||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            48899999999999999999999999999999999998 86

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.4e-11  Score=79.36  Aligned_cols=36  Identities=19%  Similarity=0.353  Sum_probs=27.4

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            6 SGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            677777777777777777777777777777777776

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5e-11  Score=81.73  Aligned_cols=43  Identities=26%  Similarity=0.447  Sum_probs=41.0

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |+++|.+.+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            588999999999998 9999999999999999999999999975

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.00  E-value=1.5e-10  Score=77.48  Aligned_cols=41  Identities=27%  Similarity=0.394  Sum_probs=37.5

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      |+++|++++||.|. |+++|.+.+.|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            67889999999998 999999999999999999999999985

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7e-11  Score=80.95  Aligned_cols=44  Identities=25%  Similarity=0.308  Sum_probs=41.2

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhccc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMNS  593 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~~  593 (606)
                      +|+++|++++||.|. |+++|.+...|..|+++|++++||.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            478999999999998 99999999999999999999999999753

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8e-11  Score=80.69  Aligned_cols=43  Identities=28%  Similarity=0.459  Sum_probs=40.6

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhccc
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMNS  593 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~~  593 (606)
                      |+++|++++||.|. |+++|.+...|..|+++|++++||.|..+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            78899999999998 99999999999999999999999999753

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6e-11  Score=81.32  Aligned_cols=43  Identities=28%  Similarity=0.396  Sum_probs=40.8

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |+++|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            478899999999998 9999999999999999999999999975

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.00  E-value=7.3e-11  Score=84.03  Aligned_cols=51  Identities=14%  Similarity=0.100  Sum_probs=48.2

Q ss_pred             chhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchh
Q psy15165        539 NKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTE  589 (606)
Q Consensus       539 ~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~  589 (606)
                      ++.|.....|..|+++|++++||.|. |+++|.+.+.|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            47899999999999999999999998 9999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.5e-11  Score=81.14  Aligned_cols=37  Identities=32%  Similarity=0.456  Sum_probs=24.5

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      ++++||.|++|++.|.+...|..|+++|++++||.|.
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            8 TGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5666666666666666666666666666666666663

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.9e-11  Score=80.70  Aligned_cols=36  Identities=36%  Similarity=0.488  Sum_probs=22.5

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      +++++|.|++|++.|.....|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            8 TGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            556666666666666666666666666666666665

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.1e-11  Score=80.66  Aligned_cols=42  Identities=24%  Similarity=0.486  Sum_probs=40.3

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      |+++|++++||.|. |+++|.+...|..|+++|++++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            78899999999998 9999999999999999999999999975

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=4.9e-11  Score=81.78  Aligned_cols=37  Identities=27%  Similarity=0.384  Sum_probs=24.9

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            8 TGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            6666666666666666666666666666666666664

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=6.4e-11  Score=81.17  Aligned_cols=36  Identities=42%  Similarity=0.597  Sum_probs=23.4

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A            8 SGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             CCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            566666666666666666666666666666666666

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.6e-10  Score=79.57  Aligned_cols=38  Identities=34%  Similarity=0.454  Sum_probs=30.1

Q ss_pred             CCCccccccccchhccChhhHHHHHh-hhcCCCCcccc-c
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMR-THTNEKPYKCV-C  565 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~-~H~~~kp~~C~-C  565 (606)
                      ++++||.|++|++.|.....|.+|++ +|++++||.|. |
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            8 TGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            77778888888888888888888887 78888888875 5

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.4e-10  Score=79.43  Aligned_cols=43  Identities=30%  Similarity=0.446  Sum_probs=39.6

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            478899999999998 9999999999999999999999999974

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=7.1e-11  Score=80.94  Aligned_cols=44  Identities=27%  Similarity=0.406  Sum_probs=41.3

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhccc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMNS  593 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~~  593 (606)
                      +|+++|++++||.|. |+++|.+.+.|..|+++|++++||.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999998 99999999999999999999999999753

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=8.7e-11  Score=80.48  Aligned_cols=44  Identities=27%  Similarity=0.421  Sum_probs=41.3

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhccc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMNS  593 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~~  593 (606)
                      +|+++|++++||.|. |+++|.+...|..|+++|++++||.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            488999999999998 99999999999999999999999999753

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.4e-11  Score=80.32  Aligned_cols=43  Identities=26%  Similarity=0.342  Sum_probs=40.6

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhccc
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMNS  593 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~~  593 (606)
                      |+++|++++||.|. |+++|.+.+.|..|+++|++++||.|..+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            78899999999998 99999999999999999999999999753

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.1e-11  Score=80.39  Aligned_cols=36  Identities=36%  Similarity=0.578  Sum_probs=22.9

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A            8 TGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             SSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            556666666666666666666666666666666665

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.4e-11  Score=80.31  Aligned_cols=36  Identities=36%  Similarity=0.500  Sum_probs=22.3

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A            8 TGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             SCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCC
Confidence            556666666666666666666666666666666665

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2e-10  Score=76.90  Aligned_cols=41  Identities=29%  Similarity=0.377  Sum_probs=36.7

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      |+++|++++||.|. |+++|.+.+.|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            67789999999998 999999999999999999999999884

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.8e-10  Score=78.91  Aligned_cols=37  Identities=35%  Similarity=0.521  Sum_probs=30.9

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            8 SGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            7788888888888888888888888888888888885

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.99  E-value=8.3e-11  Score=80.58  Aligned_cols=44  Identities=27%  Similarity=0.441  Sum_probs=41.2

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhccc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMNS  593 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~~  593 (606)
                      .|+++|++++||.|. |+++|.+.+.|..|+++|++++||.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            478999999999998 99999999999999999999999999753

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.9e-11  Score=80.19  Aligned_cols=36  Identities=36%  Similarity=0.595  Sum_probs=21.5

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A            8 MGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            555556666666666666666666555665555555

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=7.1e-11  Score=80.07  Aligned_cols=36  Identities=22%  Similarity=0.360  Sum_probs=24.9

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            8 TGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            666667777777777666666667666666666666

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.6e-10  Score=79.11  Aligned_cols=43  Identities=21%  Similarity=0.317  Sum_probs=38.6

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |++.|.+.+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            478889999999998 9999999999999999999999999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=6.2e-11  Score=81.24  Aligned_cols=37  Identities=32%  Similarity=0.456  Sum_probs=27.6

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            8 TGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            6777777777777777777777777777777777773

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=7.9e-11  Score=80.70  Aligned_cols=36  Identities=31%  Similarity=0.472  Sum_probs=24.4

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A            8 TGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             SSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             CCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            666666666666666666666666666666666666

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=9e-11  Score=79.54  Aligned_cols=36  Identities=36%  Similarity=0.545  Sum_probs=26.0

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            8 TGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            667777777777777777777777777777777766

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=1.9e-10  Score=79.54  Aligned_cols=41  Identities=34%  Similarity=0.550  Sum_probs=36.5

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCc
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGL  567 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~  567 (606)
                      ++++++|.|.+|++.|.+...|.+|+++|++++||.|. |++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            47788999999999999999999999999999999997 985

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1e-10  Score=78.41  Aligned_cols=36  Identities=36%  Similarity=0.649  Sum_probs=24.4

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|+++|.+.+.|.+|+++|++++||.|
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            7 GGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            666666666666666666666666666666666665

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1e-10  Score=80.09  Aligned_cols=36  Identities=31%  Similarity=0.469  Sum_probs=23.1

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A            8 TGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             CCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            566666666666666666666666666666666666

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=7.9e-11  Score=78.91  Aligned_cols=36  Identities=28%  Similarity=0.494  Sum_probs=23.8

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|+++|.+...|.+|+++|++++||.|
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            7 GGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            566666666666666666666666666666666665

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=8.9e-11  Score=80.43  Aligned_cols=36  Identities=39%  Similarity=0.540  Sum_probs=23.0

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A            8 TGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            556666666666666666666666666666666666

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=2.7e-10  Score=80.99  Aligned_cols=47  Identities=34%  Similarity=0.621  Sum_probs=42.6

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhh-hcCCCCccccCcchhccCC
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMR-VHTNEKPYKCKDCGAAFNH  409 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~f~~  409 (606)
                      .|.++++|.|++|++.|.....|..|++ +|++++||.|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            5778899999999999999999999987 8999999999999999976

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.1e-10  Score=79.92  Aligned_cols=36  Identities=25%  Similarity=0.509  Sum_probs=20.8

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            8 TGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             SSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            555555555555555555555555555555555555

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=9.8e-11  Score=80.22  Aligned_cols=36  Identities=36%  Similarity=0.607  Sum_probs=22.3

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            8 TGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            556666666666666666666666666666666665

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.2e-10  Score=77.94  Aligned_cols=40  Identities=28%  Similarity=0.384  Sum_probs=35.5

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhh
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTES  590 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c  590 (606)
                      |+++|++++||.|. |+++|.+.+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            77888999999997 99999999999999999999998887

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1e-10  Score=80.19  Aligned_cols=37  Identities=30%  Similarity=0.446  Sum_probs=26.7

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|.
T Consensus         8 ~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            8 TGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             SSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            6677777777777777777777777777777777763

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.3e-10  Score=78.31  Aligned_cols=43  Identities=23%  Similarity=0.452  Sum_probs=38.3

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      .|+++|++++||.|. |+++|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            377889999999998 9999999999999999999999999964

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.2e-10  Score=79.75  Aligned_cols=36  Identities=33%  Similarity=0.539  Sum_probs=24.5

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            8 TGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            666666666666666666666666666666666666

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=6.6e-11  Score=80.22  Aligned_cols=36  Identities=31%  Similarity=0.539  Sum_probs=28.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|++.|.....|..|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            8 AGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             SCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            777777777777777777777777777777777777

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.1e-10  Score=78.50  Aligned_cols=43  Identities=23%  Similarity=0.383  Sum_probs=37.6

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |+++|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            477889999999997 9999999999999999999999998864

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=9.5e-11  Score=79.42  Aligned_cols=36  Identities=31%  Similarity=0.452  Sum_probs=28.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            8 TGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            777777777777777777777777777777777777

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.1e-10  Score=78.54  Aligned_cols=43  Identities=30%  Similarity=0.398  Sum_probs=37.8

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |+++|.+.+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            477889999999997 9999999999999999999999998864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.96  E-value=2e-10  Score=78.60  Aligned_cols=37  Identities=35%  Similarity=0.553  Sum_probs=27.9

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|.
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            8 TGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6777777777777777777777777777777777773

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.3e-10  Score=79.66  Aligned_cols=37  Identities=30%  Similarity=0.574  Sum_probs=23.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|.
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            8 TGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5566666666666666666666666666666666663

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=78.17  Aligned_cols=43  Identities=26%  Similarity=0.371  Sum_probs=37.7

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |++.|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            477889999999997 9999999999999999999999999863

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=5.9e-11  Score=81.36  Aligned_cols=37  Identities=27%  Similarity=0.503  Sum_probs=28.3

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            8 TGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6777777777777777777777777777777777774

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.96  E-value=2.7e-10  Score=76.23  Aligned_cols=36  Identities=25%  Similarity=0.417  Sum_probs=30.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|++.|.+...|..|+++|++++||.|
T Consensus         7 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            7 GGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            778888888888888888888888888888888877

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.7e-10  Score=77.95  Aligned_cols=42  Identities=21%  Similarity=0.282  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      |+++|++++||.|. |++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            77889999999998 9999999999999999999999999975

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.96  E-value=8.9e-11  Score=80.45  Aligned_cols=43  Identities=23%  Similarity=0.441  Sum_probs=40.7

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      .|+++|++++||.|. |++.|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            478899999999998 9999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.2e-10  Score=78.41  Aligned_cols=37  Identities=30%  Similarity=0.448  Sum_probs=27.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            8 TGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            6677777777777777777777777777777777773

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.1e-10  Score=78.52  Aligned_cols=43  Identities=28%  Similarity=0.481  Sum_probs=39.2

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            478899999999998 9999999999999999999999999964

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.3e-10  Score=77.49  Aligned_cols=42  Identities=26%  Similarity=0.274  Sum_probs=35.9

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      +|+++|++++||.|. |++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            477888888888887 888888888888888888888888884

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=78.20  Aligned_cols=37  Identities=35%  Similarity=0.557  Sum_probs=28.8

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|.
T Consensus         8 ~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            8 TGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             SSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            7777777777777777777777777777777777774

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=77.33  Aligned_cols=42  Identities=29%  Similarity=0.357  Sum_probs=37.3

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      +|+++|++++||.|. |+++|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            478889999999997 999999999999999999999999884

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1e-10  Score=80.11  Aligned_cols=43  Identities=33%  Similarity=0.425  Sum_probs=40.7

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |+++|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            478899999999998 9999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.3e-10  Score=78.29  Aligned_cols=43  Identities=30%  Similarity=0.408  Sum_probs=37.7

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |+++|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            477889999999997 9999999999999999999999999864

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2.3e-10  Score=76.60  Aligned_cols=40  Identities=28%  Similarity=0.419  Sum_probs=35.5

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhh
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTES  590 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c  590 (606)
                      |+++|++++||.|. |+++|.+.+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            67788999999997 99999999999999999999999887

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.5e-10  Score=78.16  Aligned_cols=43  Identities=23%  Similarity=0.412  Sum_probs=37.9

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |++.|.+.+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            477889999999997 9999999999999999999999999864

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2.4e-10  Score=77.40  Aligned_cols=42  Identities=21%  Similarity=0.270  Sum_probs=37.7

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      +|+++|++++||.|. |+++|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            478889999999998 999999999999999999999999884

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.95  E-value=4.6e-11  Score=87.77  Aligned_cols=54  Identities=19%  Similarity=0.338  Sum_probs=42.6

Q ss_pred             HHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHH
Q psy15165        516 LSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLK  576 (606)
Q Consensus       516 L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~  576 (606)
                      |..|++ .|   ++++||.|+.||+.|.....|.   ++|++++||.|. |+++|....++.
T Consensus         2 L~~h~~-~H---~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDER-DS---TNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSS-SC---CSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHH-Hc---CCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            345666 44   8888889988998888888776   788888889997 998888776554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1e-10  Score=80.16  Aligned_cols=43  Identities=23%  Similarity=0.393  Sum_probs=40.8

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |+++|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            478999999999998 9999999999999999999999999974

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.3e-10  Score=79.65  Aligned_cols=36  Identities=28%  Similarity=0.498  Sum_probs=23.6

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|++.|.....|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            8 TGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             CCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            566666666666666666666666666666666666

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2e-10  Score=76.90  Aligned_cols=36  Identities=25%  Similarity=0.480  Sum_probs=29.0

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|+.|+++|.+...|.+|+++|++++||.|
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            7 GGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            777788888888888888888888888888888776

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.6e-10  Score=78.09  Aligned_cols=43  Identities=28%  Similarity=0.419  Sum_probs=37.3

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      .|+++|++++||.|. |++.|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            477888999999997 9999999999999999999999998864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.7e-10  Score=77.99  Aligned_cols=43  Identities=23%  Similarity=0.325  Sum_probs=38.1

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            477889999999997 9999999999999999999999999874

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=1.4e-10  Score=78.61  Aligned_cols=36  Identities=22%  Similarity=0.491  Sum_probs=25.3

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|+.|++.|.....|..|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            8 HTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            666677777777777777777777777777777766

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.3e-10  Score=79.51  Aligned_cols=37  Identities=32%  Similarity=0.504  Sum_probs=24.6

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      +++++|.|++|++.|.....|.+|+++|++++||.|.
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            8 TGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5666666666666666666666666666666666663

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.3e-10  Score=77.54  Aligned_cols=43  Identities=21%  Similarity=0.306  Sum_probs=37.6

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      .|+++|++++||.|. |+++|.+.+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            377889999999997 9999999999999999999999998863

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.3e-10  Score=77.53  Aligned_cols=37  Identities=38%  Similarity=0.536  Sum_probs=28.1

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      +++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            8 AGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            6777777777777777777777777777777777774

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.1e-10  Score=77.67  Aligned_cols=41  Identities=32%  Similarity=0.429  Sum_probs=38.7

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            6 SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=8.4e-11  Score=78.78  Aligned_cols=40  Identities=28%  Similarity=0.379  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhh
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTES  590 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c  590 (606)
                      |+++|++++||.|. |+++|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            67899999999998 99999999999999999999999988

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.5e-10  Score=77.41  Aligned_cols=41  Identities=37%  Similarity=0.489  Sum_probs=39.0

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            6 SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.6e-10  Score=77.35  Aligned_cols=42  Identities=21%  Similarity=0.322  Sum_probs=35.7

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      .|+++|++++||.|. |++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            367788888888887 888888888888888888888888886

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.9e-10  Score=76.98  Aligned_cols=42  Identities=29%  Similarity=0.372  Sum_probs=37.3

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      .|+++|++++||.|. |+++|.+.+.|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            378889999999997 999999999999999999999999884

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.6e-10  Score=78.01  Aligned_cols=43  Identities=23%  Similarity=0.360  Sum_probs=38.2

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |+++|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            477889999999998 9999999999999999999999999864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.6e-10  Score=78.06  Aligned_cols=43  Identities=26%  Similarity=0.376  Sum_probs=38.0

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |+++|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            477889999999998 9999999999999999999999999864

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.2e-10  Score=79.80  Aligned_cols=37  Identities=35%  Similarity=0.540  Sum_probs=28.3

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      ++++||.|.+|++.|.+...|.+|+++|++++||.|.
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            8 TGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            6777777777777777777777777777777777774

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.6e-10  Score=78.04  Aligned_cols=37  Identities=30%  Similarity=0.436  Sum_probs=25.6

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      ++++||.|++|++.|.+...|..|+++|++++||.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            8 SGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             SCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6666777777777777777777777777777776664

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.93  E-value=3.7e-10  Score=77.26  Aligned_cols=41  Identities=34%  Similarity=0.428  Sum_probs=39.0

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            6 SGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            78899999999999999999999999999999999999987

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.6e-10  Score=79.19  Aligned_cols=43  Identities=19%  Similarity=0.226  Sum_probs=40.5

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      .|+++|++++||.|. |++.|.+...|..|+++|++++||.|.-
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            478899999999998 9999999999999999999999999964

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.8e-10  Score=77.85  Aligned_cols=43  Identities=26%  Similarity=0.430  Sum_probs=37.8

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |+++|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            477889999999997 9999999999999999999999999863

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.3e-10  Score=77.52  Aligned_cols=39  Identities=33%  Similarity=0.430  Sum_probs=31.6

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      |+++++|.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            37788888888888888888888888888888888886 6

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.93  E-value=1.4e-10  Score=77.62  Aligned_cols=40  Identities=30%  Similarity=0.493  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhh
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTES  590 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c  590 (606)
                      |+++|++++||.|. |+++|.+.+.|..|++.|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            67899999999998 99999999999999999999999988

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1e-10  Score=80.07  Aligned_cols=37  Identities=24%  Similarity=0.502  Sum_probs=24.6

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      ++++||.|++|++.|.....|.+|+++|++++||.|.
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            8 TGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             CCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5666666666666666666666666666666666663

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.9e-10  Score=76.95  Aligned_cols=41  Identities=32%  Similarity=0.499  Sum_probs=38.7

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            68899999999999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.5e-10  Score=77.38  Aligned_cols=41  Identities=32%  Similarity=0.510  Sum_probs=38.6

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            6 SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.7e-10  Score=77.27  Aligned_cols=41  Identities=37%  Similarity=0.480  Sum_probs=38.9

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            6 SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.4e-10  Score=79.42  Aligned_cols=42  Identities=26%  Similarity=0.423  Sum_probs=40.2

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      +|+++|++++||.|. |++.|.+...|..|+++|++++||.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            478999999999998 999999999999999999999999996

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.6e-10  Score=76.79  Aligned_cols=39  Identities=31%  Similarity=0.513  Sum_probs=31.9

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      |+++++|.|++|++.|.+...|.+|+++|++++||.|. |
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            37788888888888888888888888888888888886 6

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=3.2e-10  Score=76.75  Aligned_cols=42  Identities=21%  Similarity=0.308  Sum_probs=37.0

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      .|+++|++++||.|. |+++|.+.+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            477889999999997 999999999999999999999999884

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.2e-10  Score=77.57  Aligned_cols=43  Identities=26%  Similarity=0.435  Sum_probs=38.4

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      .|+++|++++||.|. |++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            378889999999998 9999999999999999999999999964

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.92  E-value=3.6e-10  Score=77.33  Aligned_cols=41  Identities=39%  Similarity=0.520  Sum_probs=39.0

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            6 SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             ccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.5e-10  Score=78.19  Aligned_cols=42  Identities=26%  Similarity=0.483  Sum_probs=39.4

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      +|+++|++++||.|. |+++|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            478899999999998 999999999999999999999999996

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.4e-10  Score=77.49  Aligned_cols=41  Identities=41%  Similarity=0.643  Sum_probs=38.5

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            6 SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            78889999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.92  E-value=3.5e-10  Score=77.38  Aligned_cols=41  Identities=32%  Similarity=0.399  Sum_probs=38.5

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            6 SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            78889999999999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.92  E-value=3.4e-10  Score=77.48  Aligned_cols=41  Identities=32%  Similarity=0.433  Sum_probs=39.3

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=3.9e-10  Score=77.15  Aligned_cols=41  Identities=39%  Similarity=0.467  Sum_probs=38.6

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            78889999999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.5e-10  Score=77.40  Aligned_cols=41  Identities=32%  Similarity=0.413  Sum_probs=38.9

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            6 SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.6e-10  Score=79.19  Aligned_cols=43  Identities=26%  Similarity=0.430  Sum_probs=40.4

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      .|+++|++++||.|. |++.|.+...|..|+++|++++||.|.-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            378899999999998 9999999999999999999999999974

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.91  E-value=4e-10  Score=77.12  Aligned_cols=41  Identities=34%  Similarity=0.510  Sum_probs=38.7

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            6 SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.5e-10  Score=77.41  Aligned_cols=43  Identities=28%  Similarity=0.444  Sum_probs=39.0

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      +|+++|++++||.|. |++.|.+.+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            478899999999998 9999999999999999999999999974

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=3.8e-10  Score=77.21  Aligned_cols=41  Identities=32%  Similarity=0.497  Sum_probs=38.4

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            6 SGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            78889999999999999999999999999999999999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=1.8e-10  Score=78.82  Aligned_cols=36  Identities=33%  Similarity=0.618  Sum_probs=23.6

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcC-CCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTN-EKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~-~kp~~C  563 (606)
                      ++++||.|++|+++|.+...|..|+++|++ ++||.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            8 QKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            566666666666666666666666666666 666666

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.2e-10  Score=76.99  Aligned_cols=41  Identities=37%  Similarity=0.490  Sum_probs=38.9

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            6 SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.3e-10  Score=76.91  Aligned_cols=41  Identities=34%  Similarity=0.489  Sum_probs=39.0

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            6 SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.9e-10  Score=77.17  Aligned_cols=42  Identities=31%  Similarity=0.445  Sum_probs=36.8

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      |+++|++++||.|. |++.|.+...|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            67788999999997 9999999999999999999999998864

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5e-10  Score=76.62  Aligned_cols=41  Identities=41%  Similarity=0.557  Sum_probs=38.9

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            6 SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.7e-10  Score=77.27  Aligned_cols=41  Identities=32%  Similarity=0.420  Sum_probs=38.8

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            6 SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.4e-10  Score=77.40  Aligned_cols=36  Identities=28%  Similarity=0.484  Sum_probs=28.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            8 TDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            677777777777777777777777777777777777

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.8e-10  Score=77.22  Aligned_cols=41  Identities=37%  Similarity=0.474  Sum_probs=38.3

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            6 SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            68889999999999999999999999999999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.8e-10  Score=77.22  Aligned_cols=41  Identities=34%  Similarity=0.462  Sum_probs=39.4

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            6 SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.9e-10  Score=77.13  Aligned_cols=41  Identities=39%  Similarity=0.530  Sum_probs=38.8

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            6 SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             cCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.7e-10  Score=76.74  Aligned_cols=41  Identities=41%  Similarity=0.698  Sum_probs=38.5

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            6 SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            78889999999999999999999999999999999999987

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=6.2e-10  Score=75.31  Aligned_cols=36  Identities=25%  Similarity=0.359  Sum_probs=28.9

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      +++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            8 AAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            777788888888888888888888888888888877

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.5e-10  Score=77.38  Aligned_cols=41  Identities=34%  Similarity=0.569  Sum_probs=38.8

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            6 SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.3e-10  Score=76.96  Aligned_cols=41  Identities=32%  Similarity=0.446  Sum_probs=38.8

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            6 SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             ccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=4.5e-10  Score=76.82  Aligned_cols=41  Identities=34%  Similarity=0.462  Sum_probs=38.5

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            78889999999999999999999999999999999999987

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.1e-10  Score=76.58  Aligned_cols=42  Identities=29%  Similarity=0.424  Sum_probs=36.8

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      |+++|++++||.|. |++.|.+...|..|+++|++++||.|..
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56788899999997 9999999999999999999999998864

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.3e-10  Score=76.94  Aligned_cols=41  Identities=34%  Similarity=0.464  Sum_probs=38.5

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            78889999999999999999999999999999999999987

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=2.5e-10  Score=77.30  Aligned_cols=41  Identities=17%  Similarity=0.139  Sum_probs=39.1

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      |+++|++++||.|. |++.|.+...|..|+++|++++||.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            67899999999998 999999999999999999999999994

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.7e-10  Score=77.28  Aligned_cols=41  Identities=37%  Similarity=0.567  Sum_probs=38.9

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            6 SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.89  E-value=6.2e-10  Score=84.50  Aligned_cols=54  Identities=33%  Similarity=0.643  Sum_probs=49.4

Q ss_pred             CccccCCC--CCCcCCChHHHHHhhhcccccCCCCccccccc--cchhccChhhHHHHHhhh
Q psy15165        498 GFFLQCPH--CPKTFPRKTELSNHIKGIHMKHELRQTFVCEY--CNKEFTFLQYLKRHMRTH  555 (606)
Q Consensus       498 ~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~--C~k~f~~~~~L~~H~~~H  555 (606)
                      ..+|.|+.  |++.|.....|..|++ .|   +++++|.|.+  |++.|.....|.+|+++|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~-~H---~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTR-TH---TGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHH-HH---SSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHH-hc---CCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34499988  9999999999999998 66   8999999976  999999999999999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.6e-10  Score=77.32  Aligned_cols=41  Identities=27%  Similarity=0.348  Sum_probs=38.9

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            6 SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.3e-10  Score=78.75  Aligned_cols=42  Identities=24%  Similarity=0.311  Sum_probs=39.9

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      +|+++|++++||.|. |+++|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            478999999999998 999999999999999999999999984

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.4e-10  Score=76.88  Aligned_cols=41  Identities=29%  Similarity=0.413  Sum_probs=39.1

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            6 SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=5.1e-10  Score=76.55  Aligned_cols=41  Identities=32%  Similarity=0.408  Sum_probs=38.6

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            6 SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            78889999999999999999999999999999999999987

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=6.9e-10  Score=73.78  Aligned_cols=37  Identities=27%  Similarity=0.439  Sum_probs=29.3

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      |++++||.|++|++.|.....|..|+++|++++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3777788888888888888888888888888888776

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.9e-10  Score=75.44  Aligned_cols=36  Identities=25%  Similarity=0.424  Sum_probs=26.0

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++|++.|.+...|..|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            8 SGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            667777777777777777777777777777777765

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.7e-10  Score=76.73  Aligned_cols=41  Identities=27%  Similarity=0.350  Sum_probs=38.9

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            6 SGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.8e-10  Score=76.68  Aligned_cols=41  Identities=37%  Similarity=0.491  Sum_probs=38.9

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            6 SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.88  E-value=6.2e-10  Score=76.12  Aligned_cols=41  Identities=32%  Similarity=0.386  Sum_probs=38.5

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            6 SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            68889999999999999999999999999999999999987

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=2.9e-10  Score=76.98  Aligned_cols=42  Identities=26%  Similarity=0.400  Sum_probs=39.5

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      .|+++|++++||.|. |++.|.+.+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            478999999999998 999999999999999999999999873

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.7e-10  Score=77.25  Aligned_cols=41  Identities=41%  Similarity=0.522  Sum_probs=39.3

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=5.2e-10  Score=76.50  Aligned_cols=41  Identities=24%  Similarity=0.275  Sum_probs=38.8

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            6 SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=9.6e-10  Score=75.95  Aligned_cols=43  Identities=33%  Similarity=0.490  Sum_probs=38.0

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcchh
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGA  405 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~  405 (606)
                      .|.++++|.|.+|++.|.....|..|+++|++++||.|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            4677889999999999999999999999999999999999975

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=6.3e-10  Score=76.08  Aligned_cols=41  Identities=22%  Similarity=0.285  Sum_probs=36.1

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhcccc-ccchhhc
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSV-FLLTESM  591 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~-~~~~~c~  591 (606)
                      |+++|++++||.|. |+++|.+...|..|+++|++ ++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            67888899999997 99999999999999999988 8898885

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=1e-09  Score=74.57  Aligned_cols=42  Identities=24%  Similarity=0.366  Sum_probs=39.8

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcch
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCG  404 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~  404 (606)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            688899999999999999999999999999999999999996

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.86  E-value=1.3e-09  Score=73.20  Aligned_cols=37  Identities=24%  Similarity=0.366  Sum_probs=29.6

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      |+++++|.|+.|++.|.....|.+|+++|++++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            3777888888888888888888888888888888877

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.9e-10  Score=76.24  Aligned_cols=41  Identities=34%  Similarity=0.330  Sum_probs=38.8

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            6 SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            68889999999999999999999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=9.1e-10  Score=75.66  Aligned_cols=41  Identities=37%  Similarity=0.448  Sum_probs=39.2

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhh-hcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMR-VHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|++|++.|.....|..|++ +|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            6 SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            7889999999999999999999999999 9999999999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.84  E-value=1.6e-10  Score=84.78  Aligned_cols=52  Identities=15%  Similarity=0.323  Sum_probs=46.4

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcchhccCChhHHhccc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK  417 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~  417 (606)
                      .|+++++|.|+.|++.|.....|.   ++|++++||.|+.||+.|....++..+.
T Consensus         8 ~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~~   59 (62)
T 1vd4_A            8 DSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPKK   59 (62)
T ss_dssp             SCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCCC
T ss_pred             HcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccccccc
Confidence            789999999999999999988886   8899999999999999999888776653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.84  E-value=7.7e-11  Score=92.97  Aligned_cols=55  Identities=15%  Similarity=0.212  Sum_probs=48.4

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccc
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      |++++||.|++|++.|.....|..|+++|++++||.|. |.    ....|..|.+.|.+.
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCCS
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccccc
Confidence            48899999999999999999999999999999999996 65    456677889998874

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.7e-09  Score=73.88  Aligned_cols=38  Identities=29%  Similarity=0.353  Sum_probs=30.1

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      |+++++|.|++|++.|.+...|..|+++|++++||.|.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            7 GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            37778888888888888888888888888888888874

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2e-10  Score=87.78  Aligned_cols=66  Identities=24%  Similarity=0.325  Sum_probs=54.8

Q ss_pred             HHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        514 TELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       514 ~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      ..|..|++ .|   .+++||.|..|++.| ....|..|+ .|.+++||.|. |++.|. ...|..|+++|++++
T Consensus         3 ~~L~~H~~-~~---c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEE-TE---CPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCC-CC---CCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             hHHHhhCc-cc---CCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            34566665 34   889999999999999 499999999 89999999998 999876 588999999988763

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.6e-09  Score=73.58  Aligned_cols=36  Identities=33%  Similarity=0.473  Sum_probs=28.1

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      +++++|.|++|++.|.+...|.+|+++|++++||.|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            8 TGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            677777777777777777777777777777777777

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.4e-09  Score=72.30  Aligned_cols=38  Identities=21%  Similarity=0.352  Sum_probs=36.4

Q ss_pred             hhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhh
Q psy15165        553 RTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTES  590 (606)
Q Consensus       553 ~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c  590 (606)
                      ++|++++||.|. |+++|.+...|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            479999999998 99999999999999999999999988

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.81  E-value=1.4e-09  Score=73.17  Aligned_cols=40  Identities=20%  Similarity=0.257  Sum_probs=37.7

Q ss_pred             hhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        553 RTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       553 ~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      ++|++++||.|. |++.|.+...|..|+++|++++||.|..
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            479999999998 9999999999999999999999999963

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=7.6e-10  Score=75.28  Aligned_cols=40  Identities=25%  Similarity=0.394  Sum_probs=38.0

Q ss_pred             HhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        552 MRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       552 ~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      .++|++++||.|. |++.|.+...|..|+++|++++||.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            4679999999998 999999999999999999999999996

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.9e-09  Score=72.71  Aligned_cols=41  Identities=39%  Similarity=0.636  Sum_probs=37.6

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            68888999999999999999999999999999999999887

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=9.5e-10  Score=75.18  Aligned_cols=40  Identities=15%  Similarity=0.177  Sum_probs=38.2

Q ss_pred             HhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        552 MRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       552 ~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      +++|++++||.|. |++.|.+...|..|+++|++++||.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            5789999999998 999999999999999999999999996

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.1e-09  Score=73.27  Aligned_cols=39  Identities=28%  Similarity=0.410  Sum_probs=32.8

Q ss_pred             CCCCcccccc--ccchhccChhhHHHHHhhhcCCCCcccc-c
Q psy15165        527 HELRQTFVCE--YCNKEFTFLQYLKRHMRTHTNEKPYKCV-C  565 (606)
Q Consensus       527 ~~~~k~y~C~--~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C  565 (606)
                      |+++++|.|.  .|++.|.....|.+|+++|++++||.|. |
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3788888887  7888888888888888888888888886 6

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.1e-09  Score=73.41  Aligned_cols=41  Identities=34%  Similarity=0.433  Sum_probs=38.7

Q ss_pred             ccCCCCcccccccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            68889999999999999999999999999999999999987

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.77  E-value=3e-09  Score=69.73  Aligned_cols=36  Identities=25%  Similarity=0.533  Sum_probs=27.0

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ++++||.|++||+.|.+.+.|..|+++|++++||.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            567777777777777777777777777777777765

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=3.7e-09  Score=76.43  Aligned_cols=36  Identities=25%  Similarity=0.382  Sum_probs=30.6

Q ss_pred             CCCccccccc--cchhccChhhHHHHH-hhhcCCCCccc
Q psy15165        528 ELRQTFVCEY--CNKEFTFLQYLKRHM-RTHTNEKPYKC  563 (606)
Q Consensus       528 ~~~k~y~C~~--C~k~f~~~~~L~~H~-~~H~~~kp~~C  563 (606)
                      +++|||+|.+  |+++|.+.+.|.+|+ ++|++++||.|
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            7888888865  888888888888887 57888888888

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.64  E-value=1.4e-08  Score=63.69  Aligned_cols=33  Identities=24%  Similarity=0.384  Sum_probs=27.2

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      +||.|+.||+.|.....|..|+++|++++||.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            478888888888888888888888888888753

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.63  E-value=1.2e-08  Score=66.72  Aligned_cols=37  Identities=16%  Similarity=0.201  Sum_probs=34.2

Q ss_pred             hcCCCCcccc-cCccCCchhhHHHhhhccccccchhhc
Q psy15165        555 HTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESM  591 (606)
Q Consensus       555 H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~  591 (606)
                      |++++||.|. |++.|.+.+.|..|+++|++++||.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            6899999998 999999999999999999999999874

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.62  E-value=1.9e-08  Score=63.90  Aligned_cols=33  Identities=24%  Similarity=0.436  Sum_probs=25.8

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCC
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP  560 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp  560 (606)
                      +++++|.|..|++.|.+...|..|+++|++++|
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            677778888888888888888888888877765

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.9e-08  Score=69.27  Aligned_cols=41  Identities=29%  Similarity=0.396  Sum_probs=37.6

Q ss_pred             ccCCCCccccc--ccccccCchHHHHhhhhhcCCCCccccCcc
Q psy15165        363 KHQLEKTYICE--YCHKEFTFYNYLRRHMRVHTNEKPYKCKDC  403 (606)
Q Consensus       363 ~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  403 (606)
                      .|+++++|.|.  .|++.|.....|..|+++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            68889999998  899999999999999999999999999887

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.61  E-value=1e-08  Score=66.18  Aligned_cols=30  Identities=23%  Similarity=0.418  Sum_probs=17.1

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcC
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      ++++||.|+.|++.|.+...|..|+++|+|
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            7 TGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            555555555555555555555555555554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.60  E-value=2.3e-08  Score=63.55  Aligned_cols=33  Identities=30%  Similarity=0.577  Sum_probs=25.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCC
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP  560 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp  560 (606)
                      ++++||.|.+|++.|.....|.+|+++|++++|
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            677777777777777777777777777777664

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=9.1e-09  Score=66.40  Aligned_cols=33  Identities=24%  Similarity=0.544  Sum_probs=24.8

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCCC
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKP  560 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp  560 (606)
                      ++++||.|++|++.|.....|..|+++|++++|
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            5 SSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            677777777777777777777777777777665

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=2.3e-08  Score=64.44  Aligned_cols=36  Identities=17%  Similarity=0.318  Sum_probs=32.7

Q ss_pred             HhhhcCCCCcccc-cCccCCchhhHHHhhhccccccc
Q psy15165        552 MRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLL  587 (606)
Q Consensus       552 ~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~  587 (606)
                      +++|++++||.|. |+++|.+...|..|+++|++++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            3579999999998 99999999999999999998875

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=7e-09  Score=79.04  Aligned_cols=67  Identities=21%  Similarity=0.284  Sum_probs=58.5

Q ss_pred             hhhhcccccccCCccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        486 YHINGHIKDKHSGFFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       486 ~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      ..|..|+.++.+..+|.|+.|++.|. ...|..|+  .|   .+++||.|+.|++.|. ...|..|+++|++++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~--~~---c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE--DY---CGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH--HH---HHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH--hH---cCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            46788888867777799999999995 99999998  35   8899999999999988 599999999999864

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=2.9e-08  Score=64.03  Aligned_cols=32  Identities=19%  Similarity=0.241  Sum_probs=27.6

Q ss_pred             CCCCccccccc--cchhccChhhHHHHHhhhcCC
Q psy15165        527 HELRQTFVCEY--CNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       527 ~~~~k~y~C~~--C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      +++++||+|++  |+++|.+++.|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            37888999986  999999999999999999876

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.56  E-value=4.2e-08  Score=70.95  Aligned_cols=41  Identities=22%  Similarity=0.267  Sum_probs=36.8

Q ss_pred             hhcCCCCccc--c-cCccCCchhhHHHhh-hccccccchhhcccc
Q psy15165        554 THTNEKPYKC--V-CGLGFNFNVSLKNHK-QKCSVFLLTESMNSV  594 (606)
Q Consensus       554 ~H~~~kp~~C--~-C~~~F~~~~~L~~H~-~~h~~~~~~~c~~~~  594 (606)
                      .++|+|||.|  . |+++|.+.+.|..|+ ++|++++||-|.+..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~~   65 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEVE   65 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccccc
Confidence            3689999999  4 999999999999998 689999999998843

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.51  E-value=4.6e-08  Score=62.97  Aligned_cols=35  Identities=26%  Similarity=0.524  Sum_probs=31.3

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhccccc
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      |+++|++++||.|. |++.|.+...|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            67889999999998 999999999999999998864

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.51  E-value=3.6e-08  Score=62.54  Aligned_cols=34  Identities=18%  Similarity=0.318  Sum_probs=31.8

Q ss_pred             hhcCCCCcccc-cCccCCchhhHHHhhhccccccc
Q psy15165        554 THTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLL  587 (606)
Q Consensus       554 ~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~  587 (606)
                      +|++++||.|. |+++|.+.+.|..|++.|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            48899999998 99999999999999999998875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.50  E-value=4.9e-08  Score=63.30  Aligned_cols=35  Identities=23%  Similarity=0.397  Sum_probs=30.0

Q ss_pred             CCCcccccc--ccchhccChhhHHHHHhhhcCCCCcc
Q psy15165        528 ELRQTFVCE--YCNKEFTFLQYLKRHMRTHTNEKPYK  562 (606)
Q Consensus       528 ~~~k~y~C~--~C~k~f~~~~~L~~H~~~H~~~kp~~  562 (606)
                      ++++||.|.  .|+++|.+.+.|.+|+++|++++||.
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            678889998  49999999999999999999888873

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.49  E-value=4.7e-08  Score=62.05  Aligned_cols=34  Identities=18%  Similarity=0.361  Sum_probs=31.9

Q ss_pred             hhcCCCCcccc-cCccCCchhhHHHhhhccccccc
Q psy15165        554 THTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLL  587 (606)
Q Consensus       554 ~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~  587 (606)
                      +|++++||.|. |++.|.+.+.|..|++.|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            48999999998 99999999999999999998875

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.46  E-value=1.4e-08  Score=79.87  Aligned_cols=49  Identities=12%  Similarity=0.153  Sum_probs=43.4

Q ss_pred             HhhhcCCCCcccc-cCccCCchhhHHHhhhccccccchhhccccCCCCCC
Q psy15165        552 MRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMNSVSGAQGA  600 (606)
Q Consensus       552 ~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~~~~~~~~~  600 (606)
                      .++|++++||.|. |++.|.+...|..|+++|++++||.|.......+-+
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~~~~~   66 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQLL   66 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhHHHHH
Confidence            4579999999998 999999999999999999999999998876655443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=1.1e-07  Score=60.78  Aligned_cols=33  Identities=27%  Similarity=0.481  Sum_probs=26.3

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      |++++||.|.+|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            377788888888888888888888888887764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1.3e-07  Score=60.44  Aligned_cols=33  Identities=30%  Similarity=0.485  Sum_probs=25.3

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      |++++||.|++|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            377778888888888888888888888877653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1e-07  Score=60.84  Aligned_cols=32  Identities=22%  Similarity=0.383  Sum_probs=22.9

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      ++++||.|.+|++.|.....|.+|+++|++++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            5 SSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            66677777777777777777777777777653

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=1.7e-07  Score=59.73  Aligned_cols=33  Identities=30%  Similarity=0.495  Sum_probs=26.5

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      |+++++|.|++|++.|.+...|..|+++|++++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            377788888888888888888888888888764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.2e-07  Score=60.89  Aligned_cols=32  Identities=28%  Similarity=0.505  Sum_probs=24.8

Q ss_pred             CCCccccccccchhccCh-hhHHHHHhhhcCCC
Q psy15165        528 ELRQTFVCEYCNKEFTFL-QYLKRHMRTHTNEK  559 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~-~~L~~H~~~H~~~k  559 (606)
                      ++++||.|+.|++.|... ..|..|+++|++++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            5 SSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            677788888888888887 78888888877653

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.39  E-value=1.5e-07  Score=60.52  Aligned_cols=34  Identities=26%  Similarity=0.557  Sum_probs=28.9

Q ss_pred             cCCCCccccccc--cchhccChhhHHHHHhhhcCCC
Q psy15165        526 KHELRQTFVCEY--CNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       526 ~~~~~k~y~C~~--C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      .|++++||.|.+  |++.|.+.+.|.+|+++|+|++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            348889999985  9999999999999999998864

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.37  E-value=1.6e-08  Score=62.88  Aligned_cols=31  Identities=26%  Similarity=0.433  Sum_probs=20.0

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCCCCc
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEKPY  561 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~  561 (606)
                      +||.|+.||+.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3566666666666666666666666666665

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=1.9e-07  Score=59.53  Aligned_cols=32  Identities=53%  Similarity=0.965  Sum_probs=26.1

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      ++++||.|++|++.|.....|..|+++|++++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            67788888888888888888888888888764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.34  E-value=1.8e-07  Score=59.33  Aligned_cols=25  Identities=24%  Similarity=0.389  Sum_probs=14.4

Q ss_pred             CCCccccccccchhccChhhHHHHH
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHM  552 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~  552 (606)
                      .+++||.|+.||++|++.+.|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4555555555555555555555555

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.33  E-value=1.5e-07  Score=60.92  Aligned_cols=35  Identities=31%  Similarity=0.575  Sum_probs=32.8

Q ss_pred             hcCCCCcccc---cCccCCchhhHHHhhhccccccchh
Q psy15165        555 HTNEKPYKCV---CGLGFNFNVSLKNHKQKCSVFLLTE  589 (606)
Q Consensus       555 H~~~kp~~C~---C~~~F~~~~~L~~H~~~h~~~~~~~  589 (606)
                      |++++||.|.   |+++|.+.+.|..|+++|++++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            7899999996   9999999999999999999999874

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.33  E-value=1.9e-07  Score=58.32  Aligned_cols=31  Identities=16%  Similarity=0.221  Sum_probs=29.4

Q ss_pred             CCcccc-cCccCCchhhHHHhhhccccccchh
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTE  589 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~  589 (606)
                      +||.|. |+++|.+.+.|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            689998 9999999999999999999999985

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=8.3e-08  Score=61.82  Aligned_cols=31  Identities=26%  Similarity=0.484  Sum_probs=24.0

Q ss_pred             CCCccccccccchhccChhhHHHH-HhhhcCC
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRH-MRTHTNE  558 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H-~~~H~~~  558 (606)
                      ++++||.|+.|++.|.....|..| +++|+++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            5 SSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            777788888888888888888888 7777764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=2e-07  Score=59.46  Aligned_cols=34  Identities=15%  Similarity=0.220  Sum_probs=31.0

Q ss_pred             hhhcCCCCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        553 RTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       553 ~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      +.|++++||.|. |++.|.+.+.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            368999999998 9999999999999999998764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.31  E-value=1.6e-07  Score=59.48  Aligned_cols=31  Identities=19%  Similarity=0.489  Sum_probs=27.7

Q ss_pred             hcCCCCcccc-cCccCCchhhHHHhhhccccccchhhcc
Q psy15165        555 HTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTESMN  592 (606)
Q Consensus       555 H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~c~~  592 (606)
                      ++|++||.|. |+++|.+.+.|.+|+       ||.|.+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            5789999998 999999999999998       888875

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=1.4e-07  Score=60.66  Aligned_cols=34  Identities=21%  Similarity=0.313  Sum_probs=31.2

Q ss_pred             hhhcCCCCcccc-cCccCCch-hhHHHhhhcccccc
Q psy15165        553 RTHTNEKPYKCV-CGLGFNFN-VSLKNHKQKCSVFL  586 (606)
Q Consensus       553 ~~H~~~kp~~C~-C~~~F~~~-~~L~~H~~~h~~~~  586 (606)
                      ++|++++||.|. |++.|.+. +.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            479999999998 99999999 99999999998764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.31  E-value=2.2e-07  Score=63.82  Aligned_cols=31  Identities=26%  Similarity=0.498  Sum_probs=15.9

Q ss_pred             hcCCCCcccc-cCccCCchhhHHHhhh-ccccc
Q psy15165        555 HTNEKPYKCV-CGLGFNFNVSLKNHKQ-KCSVF  585 (606)
Q Consensus       555 H~~~kp~~C~-C~~~F~~~~~L~~H~~-~h~~~  585 (606)
                      |++++||.|. |+++|.+...|..|++ +|+++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            4555555554 5555555555555555 55443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=3e-07  Score=59.11  Aligned_cols=34  Identities=26%  Similarity=0.304  Sum_probs=29.3

Q ss_pred             HhhhcCCCCcccc-cCccCCchhhHHHh-hhccccc
Q psy15165        552 MRTHTNEKPYKCV-CGLGFNFNVSLKNH-KQKCSVF  585 (606)
Q Consensus       552 ~~~H~~~kp~~C~-C~~~F~~~~~L~~H-~~~h~~~  585 (606)
                      |++|++++||.|. |+++|.+.+.|..| ++.|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            3578999999998 99999999999999 8888764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=2.1e-07  Score=59.37  Aligned_cols=34  Identities=26%  Similarity=0.472  Sum_probs=31.1

Q ss_pred             hhhcCCCCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        553 RTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       553 ~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      ++|++++||.|. |++.|.+...|..|++.|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            368999999998 9999999999999999998764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=2.4e-07  Score=59.65  Aligned_cols=32  Identities=16%  Similarity=0.268  Sum_probs=29.4

Q ss_pred             hhcCCCCcccc---cCccCCchhhHHHhhhccccc
Q psy15165        554 THTNEKPYKCV---CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       554 ~H~~~kp~~C~---C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      .+++++||.|.   |+++|.+.+.|.+|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            47899999994   999999999999999999975

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=2.3e-07  Score=59.15  Aligned_cols=33  Identities=27%  Similarity=0.480  Sum_probs=30.7

Q ss_pred             hhcCCCCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        554 THTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       554 ~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      +|++++||.|. |++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            68999999998 9999999999999999998764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.23  E-value=4e-07  Score=62.49  Aligned_cols=34  Identities=21%  Similarity=0.489  Sum_probs=29.9

Q ss_pred             CCCCccccccccchhccChhhHHHHHh-hhcCCCC
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMR-THTNEKP  560 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~-~H~~~kp  560 (606)
                      |++++||.|.+|++.|.....|.+|++ +|+++.+
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            489999999999999999999999999 9998753

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.22  E-value=5.6e-07  Score=54.41  Aligned_cols=29  Identities=31%  Similarity=0.771  Sum_probs=21.5

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            56777777777777777777777777653

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=5.3e-07  Score=57.40  Aligned_cols=33  Identities=27%  Similarity=0.337  Sum_probs=30.6

Q ss_pred             hhcCCCCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        554 THTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       554 ~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      +|++++||.|. |++.|.+...|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            58899999998 9999999999999999998764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.21  E-value=5.1e-07  Score=54.18  Aligned_cols=29  Identities=34%  Similarity=0.561  Sum_probs=21.1

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      +||.|+.|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            46777777777777777777777777653

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.21  E-value=7.1e-07  Score=53.51  Aligned_cols=29  Identities=55%  Similarity=1.004  Sum_probs=21.5

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      +||.|+.|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            36777777777777777777777777653

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.18  E-value=9e-08  Score=65.45  Aligned_cols=33  Identities=27%  Similarity=0.527  Sum_probs=26.6

Q ss_pred             CCCCcccccc--ccchhccChhhHHHHHhhhcCCC
Q psy15165        527 HELRQTFVCE--YCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       527 ~~~~k~y~C~--~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      |++++||.|+  .|+++|...+.|.+|+++|+|++
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3788888885  68888888888888888888764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.17  E-value=8.7e-07  Score=53.52  Aligned_cols=30  Identities=27%  Similarity=0.576  Sum_probs=22.3

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCCCC
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEKP  560 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp  560 (606)
                      +||.|+.|++.|...+.|..|+++|++++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            367777787777777777777777777654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=6.7e-07  Score=56.94  Aligned_cols=33  Identities=24%  Similarity=0.404  Sum_probs=30.4

Q ss_pred             hhcCCCCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        554 THTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       554 ~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      +|++++||.|. |++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            57899999998 9999999999999999998764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.15  E-value=1.1e-06  Score=54.16  Aligned_cols=30  Identities=27%  Similarity=0.609  Sum_probs=24.0

Q ss_pred             Ccccccc--ccchhccChhhHHHHHhhhcCCC
Q psy15165        530 RQTFVCE--YCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       530 ~k~y~C~--~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3678888  78888888888888888888764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.15  E-value=1.5e-07  Score=58.33  Aligned_cols=31  Identities=16%  Similarity=0.323  Sum_probs=29.0

Q ss_pred             CCcccc-cCccCCchhhHHHhhhccccccchh
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQKCSVFLLTE  589 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~~~  589 (606)
                      +||.|. |+++|.+.+.|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   32 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVALG   32 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCCC
Confidence            589998 9999999999999999999999874

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.14  E-value=8.3e-07  Score=53.15  Aligned_cols=29  Identities=45%  Similarity=0.778  Sum_probs=22.9

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            46788888888888888888888887764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.14  E-value=8e-07  Score=52.84  Aligned_cols=27  Identities=30%  Similarity=0.776  Sum_probs=18.3

Q ss_pred             ccccccccchhccChhhHHHHHhhhcC
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      +||.|+.|++.|.....|..|+++|+|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            566777777777777777777766653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.14  E-value=1e-06  Score=53.86  Aligned_cols=29  Identities=55%  Similarity=0.976  Sum_probs=21.5

Q ss_pred             cccccc--ccchhccChhhHHHHHhhhcCCC
Q psy15165        531 QTFVCE--YCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       531 k~y~C~--~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      +||.|+  .||++|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            467776  77777777777777777777653

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.13  E-value=4.2e-07  Score=62.04  Aligned_cols=40  Identities=15%  Similarity=0.201  Sum_probs=32.5

Q ss_pred             hHHHHHhhhcCCCCccc--c-cCccCCchhhHHHhhhcccccc
Q psy15165        547 YLKRHMRTHTNEKPYKC--V-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       547 ~L~~H~~~H~~~kp~~C--~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      .+..|+.+|++++||.|  . |+++|.+.+.|..|+++|++++
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34455667999999999  4 9999999999999999988764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.42  E-value=3.2e-07  Score=55.20  Aligned_cols=28  Identities=39%  Similarity=0.642  Sum_probs=20.2

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCC
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3677777777777777777777777765

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.13  E-value=7.4e-07  Score=52.58  Aligned_cols=26  Identities=27%  Similarity=0.617  Sum_probs=17.6

Q ss_pred             ccccccccchhccChhhHHHHHhhhc
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                      +||.|+.||+.|...+.|.+|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            56667777777777777777766663

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.12  E-value=9.7e-07  Score=52.81  Aligned_cols=29  Identities=28%  Similarity=0.633  Sum_probs=21.3

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      +||.|+.|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46777777777777777777777777653

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.12  E-value=1.4e-06  Score=63.78  Aligned_cols=33  Identities=24%  Similarity=0.351  Sum_probs=26.7

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      +.+++||.|..|++.|.+...|.+|+++|+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            367788888888888888888888888888764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.12  E-value=1e-06  Score=51.89  Aligned_cols=26  Identities=27%  Similarity=0.651  Sum_probs=18.1

Q ss_pred             ccccccccchhccChhhHHHHHhhhc
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                      +||.|+.||+.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            56777777777777777777776664

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.37  E-value=4.1e-07  Score=55.12  Aligned_cols=28  Identities=39%  Similarity=0.777  Sum_probs=20.4

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCC
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5677777777777777777777777665

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.06  E-value=1.4e-06  Score=51.18  Aligned_cols=26  Identities=35%  Similarity=0.682  Sum_probs=15.3

Q ss_pred             cccccccchhccChhhHHHHHhhhcC
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      ||.|..|++.|.+...|.+|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35566666666666666666666654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.01  E-value=1.7e-06  Score=55.41  Aligned_cols=33  Identities=18%  Similarity=0.217  Sum_probs=30.1

Q ss_pred             hhcCCCCcccc---cCccCCchhhHHHhhhcccccc
Q psy15165        554 THTNEKPYKCV---CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       554 ~H~~~kp~~C~---C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      .|++++||.|.   |+++|.+.+.|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            48899999994   9999999999999999998764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.97  E-value=2.3e-06  Score=51.62  Aligned_cols=27  Identities=33%  Similarity=0.765  Sum_probs=16.1

Q ss_pred             cccccccchhccChhhHHHH-HhhhcCC
Q psy15165        532 TFVCEYCNKEFTFLQYLKRH-MRTHTNE  558 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H-~~~H~~~  558 (606)
                      ||.|+.|++.|.+...|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            45666666666666666666 4556554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.20  E-value=1.1e-06  Score=51.29  Aligned_cols=26  Identities=38%  Similarity=0.801  Sum_probs=17.0

Q ss_pred             ccccccccchhccChhhHHHHHhhhc
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                      +||.|+.||+.|.+...|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            35666666666666666666666653

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.92  E-value=4.3e-06  Score=50.29  Aligned_cols=29  Identities=31%  Similarity=0.493  Sum_probs=26.5

Q ss_pred             CCCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        558 EKPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       558 ~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      ++||.|. |+++|.....|..|++.|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            4799998 9999999999999999998764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.91  E-value=4.4e-06  Score=61.08  Aligned_cols=34  Identities=24%  Similarity=0.322  Sum_probs=30.9

Q ss_pred             hhcCCCCcccc-cCccCCchhhHHHhhhccccccc
Q psy15165        554 THTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVFLL  587 (606)
Q Consensus       554 ~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~  587 (606)
                      .|.+++||.|. |+++|.+...|..|+++|++...
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            47889999998 99999999999999999998653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.91  E-value=4.2e-06  Score=49.99  Aligned_cols=28  Identities=18%  Similarity=0.127  Sum_probs=25.8

Q ss_pred             CCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      +||.|. |++.|...+.|..|++.|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            589998 9999999999999999998763

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.89  E-value=4.4e-06  Score=49.12  Aligned_cols=26  Identities=31%  Similarity=0.616  Sum_probs=24.2

Q ss_pred             CCCcccc-cCccCCchhhHHHhhhccc
Q psy15165        558 EKPYKCV-CGLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       558 ~kp~~C~-C~~~F~~~~~L~~H~~~h~  583 (606)
                      ++||.|. |+++|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            4799998 9999999999999999985

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.88  E-value=5.2e-06  Score=49.12  Aligned_cols=27  Identities=26%  Similarity=0.688  Sum_probs=25.0

Q ss_pred             CCCcccc-cCccCCchhhHHHhhhcccc
Q psy15165        558 EKPYKCV-CGLGFNFNVSLKNHKQKCSV  584 (606)
Q Consensus       558 ~kp~~C~-C~~~F~~~~~L~~H~~~h~~  584 (606)
                      ++||.|. |+++|.+.+.|..|++.|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            5799998 99999999999999999874

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.88  E-value=5.8e-06  Score=49.31  Aligned_cols=28  Identities=21%  Similarity=0.381  Sum_probs=25.7

Q ss_pred             CCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      +||.|. |+++|.+.+.|..|++.|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            589998 9999999999999999998763

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.86  E-value=5.6e-06  Score=48.55  Aligned_cols=26  Identities=23%  Similarity=0.459  Sum_probs=24.2

Q ss_pred             CCCcccc-cCccCCchhhHHHhhhccc
Q psy15165        558 EKPYKCV-CGLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       558 ~kp~~C~-C~~~F~~~~~L~~H~~~h~  583 (606)
                      ++||.|. ||++|.+.+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            5799998 9999999999999999885

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.86  E-value=5.7e-06  Score=49.74  Aligned_cols=29  Identities=24%  Similarity=0.329  Sum_probs=26.6

Q ss_pred             CCcccc-cCccCCchhhHHHhhhccccccc
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQKCSVFLL  587 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~~h~~~~~  587 (606)
                      +||.|. |++.|...+.|..|++.|++++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            589998 99999999999999999998764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.03  E-value=2.6e-06  Score=51.03  Aligned_cols=28  Identities=36%  Similarity=0.581  Sum_probs=25.7

Q ss_pred             CCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      +||.|. |+++|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            589998 9999999999999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.80  E-value=6.9e-06  Score=48.88  Aligned_cols=28  Identities=32%  Similarity=0.284  Sum_probs=25.7

Q ss_pred             CCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      +||.|. |+++|.+...|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            589998 9999999999999999998763

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.00  E-value=2.9e-06  Score=51.17  Aligned_cols=29  Identities=28%  Similarity=0.418  Sum_probs=26.4

Q ss_pred             CCCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        558 EKPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       558 ~kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      ++||.|. |+++|.+...|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            4799998 9999999999999999998763

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.79  E-value=1.1e-05  Score=47.08  Aligned_cols=26  Identities=27%  Similarity=0.508  Sum_probs=23.0

Q ss_pred             Ccccc-cCccCCchhhHHHhhhccccc
Q psy15165        560 PYKCV-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       560 p~~C~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      ||.|. |++.|.+.+.|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            69998 999999999999999999863

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.77  E-value=7e-06  Score=48.89  Aligned_cols=28  Identities=36%  Similarity=0.482  Sum_probs=25.7

Q ss_pred             CCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      +||.|. |+++|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            589998 9999999999999999998764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.76  E-value=1e-05  Score=48.14  Aligned_cols=27  Identities=33%  Similarity=0.717  Sum_probs=22.5

Q ss_pred             cccccc--ccchhccChhhHHHHHhhhcC
Q psy15165        531 QTFVCE--YCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       531 k~y~C~--~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      ++|.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            468888  888888888888888888874

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.72  E-value=2e-05  Score=48.27  Aligned_cols=30  Identities=30%  Similarity=0.644  Sum_probs=24.1

Q ss_pred             CCccccc--ccccccCchHHHHhhhhhcCCCC
Q psy15165        367 EKTYICE--YCHKEFTFYNYLRRHMRVHTNEK  396 (606)
Q Consensus       367 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~  396 (606)
                      +++|.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3678888  78888888888888888888753

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.72  E-value=1.8e-05  Score=48.03  Aligned_cols=28  Identities=46%  Similarity=0.942  Sum_probs=20.3

Q ss_pred             Cccccc--ccccccCchHHHHhhhhhcCCC
Q psy15165        368 KTYICE--YCHKEFTFYNYLRRHMRVHTNE  395 (606)
Q Consensus       368 ~~~~C~--~C~k~f~~~~~L~~H~~~H~~~  395 (606)
                      +||.|+  .|++.|.....|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            357776  7777777777777777777765

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.71  E-value=1.6e-05  Score=47.72  Aligned_cols=28  Identities=32%  Similarity=0.435  Sum_probs=25.2

Q ss_pred             CCcccc-cCccCCchhhHHHh-hhcccccc
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNH-KQKCSVFL  586 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H-~~~h~~~~  586 (606)
                      +||.|. |+++|.+.+.|..| ++.|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            589998 99999999999999 78998763

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.84  E-value=6.1e-06  Score=47.90  Aligned_cols=25  Identities=40%  Similarity=0.752  Sum_probs=23.2

Q ss_pred             CCcccc-cCccCCchhhHHHhhhccc
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~~h~  583 (606)
                      +||.|. ||++|.+.+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            589998 9999999999999999884

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.55  E-value=6.6e-05  Score=54.53  Aligned_cols=45  Identities=27%  Similarity=0.488  Sum_probs=27.6

Q ss_pred             cchhccChhhHHHHH-hhhcCCC------Cccc--c-cCccCCchhhHHHhhhcc
Q psy15165        538 CNKEFTFLQYLKRHM-RTHTNEK------PYKC--V-CGLGFNFNVSLKNHKQKC  582 (606)
Q Consensus       538 C~k~f~~~~~L~~H~-~~H~~~k------p~~C--~-C~~~F~~~~~L~~H~~~h  582 (606)
                      |++.|.+...|..|+ +.|.+.+      +|.|  . |++.+.....|..|++..
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            666666666666665 3555543      5667  2 776666666677776654

>1v65_A Riken cDNA 2610044O15; transcriptional repressor, heterochromatin, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.212.1.1

Probab=97.46  E-value=2.2e-05  Score=57.18  Aligned_cols=36  Identities=11%  Similarity=0.253  Sum_probs=31.7

Q ss_pred             cccccccc---------ccccCCCceeeecccCCCCceeeeeccc
Q psy15165          3 DDDWNNLD---------DHVGKPSRRRSLGVESSVPKLKIKTETD   38 (606)
Q Consensus         3 ~~~~~~~~---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~   38 (606)
                      .|||..||         ||+|||.+|++||+.+.+|+++..++++
T Consensus        19 ~eew~~l~~~qk~ly~~v~le~~~~l~slg~~~~~~~~~~~~~~~   63 (64)
T 1v65_A           19 EEEWDLLDSSQKRLYEEVMLETYQNLTDIGYNWQDHHIEESGPSS   63 (64)
T ss_dssp             HHHHHTSCHHHHHHHHHHHHHTTTSCCCSCCCCCCCCCCCCCCCC
T ss_pred             HHHHhCCCHHHhhheeehhhhhhcceeeccccccCCccccccccC
Confidence            57898774         7999999999999999999999888764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.26  E-value=0.00013  Score=43.05  Aligned_cols=25  Identities=36%  Similarity=0.822  Sum_probs=16.8

Q ss_pred             ccccc--ccccccCchHHHHhhhhhcC
Q psy15165        369 TYICE--YCHKEFTFYNYLRRHMRVHT  393 (606)
Q Consensus       369 ~~~C~--~C~k~f~~~~~L~~H~~~H~  393 (606)
                      +|.|.  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56666  67777766666666666665

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.05  E-value=0.00054  Score=49.64  Aligned_cols=52  Identities=15%  Similarity=0.333  Sum_probs=42.7

Q ss_pred             CCCCCcCCChHHHHHhhhcccccCC---CCcccccc--ccchhccChhhHHHHHhhh
Q psy15165        504 PHCPKTFPRKTELSNHIKGIHMKHE---LRQTFVCE--YCNKEFTFLQYLKRHMRTH  555 (606)
Q Consensus       504 ~~C~~~f~~~~~L~~H~~~~H~~~~---~~k~y~C~--~C~k~f~~~~~L~~H~~~H  555 (606)
                      ..|++.|.+...|..|+...|....   ...+|.|.  -|++.+.....|..|+++.
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            3599999999999999976783222   22389997  6999999999999999975

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.62  E-value=0.0071  Score=53.66  Aligned_cols=80  Identities=18%  Similarity=0.347  Sum_probs=56.6

Q ss_pred             ccC--CCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHH
Q psy15165        501 LQC--PHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKN  577 (606)
Q Consensus       501 ~~C--~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~  577 (606)
                      ..|  ..|+..+. ...|..|+. .    =.-++..|+.|+..+ ....|..|+...-..++-.|. |+..|. ...|..
T Consensus        83 v~C~n~GC~~~~~-~~~l~~H~~-~----C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~  154 (170)
T 3hcs_A           83 VKCPNEGCLHKME-LRHLEDHQA-H----CEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEI  154 (170)
T ss_dssp             EECCSTTCCCEEE-GGGHHHHHT-T----CTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHH
T ss_pred             cCCCCCCCCceec-HhHHHHHHh-c----CCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHh
Confidence            457  46777654 456777864 1    234567888898887 677888898877778888898 988874 467889


Q ss_pred             hhhccccccch
Q psy15165        578 HKQKCSVFLLT  588 (606)
Q Consensus       578 H~~~h~~~~~~  588 (606)
                      |...+.|+.++
T Consensus       155 H~~~~~~~~~~  165 (170)
T 3hcs_A          155 HDQNCPLALEH  165 (170)
T ss_dssp             HHTTCCC----
T ss_pred             HHHhCcChhhh
Confidence            99998887765

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.89  E-value=0.007  Score=39.26  Aligned_cols=22  Identities=23%  Similarity=0.449  Sum_probs=12.2

Q ss_pred             CCcccc-cCccCCchhhHHHhhh
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQ  580 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~  580 (606)
                      .+|.|+ |+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            345555 5555555555555555

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.85  E-value=0.0022  Score=52.51  Aligned_cols=27  Identities=26%  Similarity=0.330  Sum_probs=14.0

Q ss_pred             CCCccccccccchhccChhhHHHHHhh
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRT  554 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~  554 (606)
                      +|+++|.|..|++.|.+.+.|..|+++
T Consensus        46 tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           46 PGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             GGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCcceEcccCcchhCCHHHHHHHHhh
Confidence            455555555555555555555555443

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.80  E-value=0.0021  Score=52.68  Aligned_cols=31  Identities=19%  Similarity=0.225  Sum_probs=23.2

Q ss_pred             HhhhcCCCCcccc-cCccCCchhhHHHhhhcc
Q psy15165        552 MRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKC  582 (606)
Q Consensus       552 ~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h  582 (606)
                      ...|+|++||.|. |++.|.+.+.|..|++..
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            3457788888886 888888888888887654

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.58  E-value=0.0097  Score=49.69  Aligned_cols=75  Identities=16%  Similarity=0.283  Sum_probs=49.9

Q ss_pred             cccCCCCCCcCCChHHHHHhhhc-ccccCCCCcccccccc------chhccChhhHHHHHhhhcCCCCcccc-cCccCCc
Q psy15165        500 FLQCPHCPKTFPRKTELSNHIKG-IHMKHELRQTFVCEYC------NKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNF  571 (606)
Q Consensus       500 ~~~C~~C~~~f~~~~~L~~H~~~-~H~~~~~~k~y~C~~C------~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~  571 (606)
                      ++.|.+|+..|.+.+.+..|... .|.  ...+.|.+..+      ++.|....    +...+.+...|.|. |++.|.+
T Consensus        32 ~~~C~~C~v~~~S~s~~~~H~~gkkH~--~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           32 DTQCKVCSAVLISESQKLAHYQSRKHA--NKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             SSEETTTTEECCSHHHHHHHHHCHHHH--HHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSS
T ss_pred             CCcCcCCCCEeCCHHHHHHHHCcHHHH--HHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCC
Confidence            38899999999999999999841 341  11133333211      22222211    22345677889998 9999999


Q ss_pred             hhhHHHhhh
Q psy15165        572 NVSLKNHKQ  580 (606)
Q Consensus       572 ~~~L~~H~~  580 (606)
                      ...|..|..
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999985

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.42  E-value=0.03  Score=49.56  Aligned_cols=139  Identities=18%  Similarity=0.340  Sum_probs=76.0

Q ss_pred             CcccccCccccCCHHHHHhhhhccccccCCCCCCcccccccccccCCHHHHHHhHhhhcCCCCCCcccCccccccCCHH-
Q psy15165        214 EFKCRVCDWKLNSYDKLLRHMDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRS-  292 (606)
Q Consensus       214 ~~~C~~C~~~f~~~~~l~~H~~~~~~h~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~-  292 (606)
                      .|.|++|...|...                     ..+ .||-.|= ..-+...+...      ...|+.|...+.... 
T Consensus        18 ~~~C~IC~~~~~~p---------------------v~~-~CgH~fC-~~Ci~~~~~~~------~~~CP~Cr~~~~~~~~   68 (170)
T 3hcs_A           18 KYECPICLMALREA---------------------VQT-PCGHRFC-KACIIKSIRDA------GHKCPVDNEILLENQL   68 (170)
T ss_dssp             GGBCTTTCSBCSSE---------------------EEC-TTSCEEE-HHHHHHHHHHH------CSBCTTTCCBCCGGGC
T ss_pred             CCCCCCCChhhcCc---------------------EEC-CCCCHHH-HHHHHHHHHhC------CCCCCCCccCcchhhh
Confidence            68999998777542                     222 3555553 23333333311      126888987765531 


Q ss_pred             ----HHHHHHHHhhCCccccccccccc--ccccc--chHhHHHHHHhccCCcceecccCccccCCHHHHHHHHhcccccc
Q psy15165        293 ----TLKNHVRVEHGENQAKRKEKKIC--DICSA--EVVHLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKH  364 (606)
Q Consensus       293 ----~L~~H~~~h~~~~~~~~~~~~~C--~~C~~--~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~h  364 (606)
                          .+..-+.    .      ....|  ..|+.  ....+..|.. .=.-.+..|+.|+..+ .+..|..|+.    ..
T Consensus        69 ~~~~~~~~~i~----~------l~v~C~n~GC~~~~~~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~----~~  132 (170)
T 3hcs_A           69 FPDNFAKREIL----S------LMVKCPNEGCLHKMELRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHIL----KD  132 (170)
T ss_dssp             EECHHHHHHHH----T------SEEECCSTTCCCEEEGGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHH----HT
T ss_pred             hhhHHHHHHHh----h------cccCCCCCCCCceecHhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhh----hh
Confidence                1111111    0      22334  34544  4456666653 2223567787787776 5566777775    34


Q ss_pred             CCCCcccccccccccCchHHHHhhhhhcCCCCcc
Q psy15165        365 QLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPY  398 (606)
Q Consensus       365 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~  398 (606)
                      -..+...|..|+..|.. ..|..|..++.|+.++
T Consensus       133 C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          133 CPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             CTTCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             CCCCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            44566778888777653 4577787777776543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.03  E-value=0.015  Score=37.78  Aligned_cols=21  Identities=29%  Similarity=0.634  Sum_probs=13.6

Q ss_pred             ccCCCCCCcCCChHHHHHhhh
Q psy15165        501 LQCPHCPKTFPRKTELSNHIK  521 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~  521 (606)
                      |.|+.|+..|.....|+.||+
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhhh
Confidence            666666666666666666664

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.86  E-value=0.015  Score=48.44  Aligned_cols=34  Identities=15%  Similarity=0.221  Sum_probs=26.2

Q ss_pred             HHhcCCCCCcccCCCCCCccCCHHHHHHHH--HHhc
Q psy15165        435 KTNHHGYEVSNLCYICGFFSAKRSTLAHHI--QDHI  468 (606)
Q Consensus       435 ~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~--~~h~  468 (606)
                      ........+++.|.+|+..|.+.+.+..|.  +.|.
T Consensus        23 ~~e~~~~~~~~~C~~C~v~~~S~s~~~~H~~gkkH~   58 (127)
T 1zu1_A           23 IRENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHA   58 (127)
T ss_dssp             HHHTTTTBCSSEETTTTEECCSHHHHHHHHHCHHHH
T ss_pred             hccccccCCCCcCcCCCCEeCCHHHHHHHHCcHHHH
Confidence            333333356789999999999999999998  5563

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=89.94  E-value=0.17  Score=30.72  Aligned_cols=26  Identities=35%  Similarity=0.634  Sum_probs=21.0

Q ss_pred             ccccccccccCCHHHHHHhHhhhcCC
Q psy15165        249 FKCRVCDWKLNSYDKLLRHIKSDHGG  274 (606)
Q Consensus       249 ~~C~~C~~~f~~~~~L~~H~~~~H~~  274 (606)
                      |.|++|.+.|.+...|..|....|..
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            78888888888888888888777753

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=87.62  E-value=0.23  Score=30.15  Aligned_cols=24  Identities=33%  Similarity=0.773  Sum_probs=21.9

Q ss_pred             ccCCCCCCcCCChHHHHHhhhccc
Q psy15165        501 LQCPHCPKTFPRKTELSNHIKGIH  524 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~~~H  524 (606)
                      |.||+|.+.|.+...|..|....|
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcc
Confidence            889999999999999999988777

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=84.17  E-value=0.68  Score=27.04  Aligned_cols=25  Identities=32%  Similarity=0.748  Sum_probs=20.4

Q ss_pred             ccccccccccCCHHHHHHhHhhhcC
Q psy15165        249 FKCRVCDWKLNSYDKLLRHIKSDHG  273 (606)
Q Consensus       249 ~~C~~C~~~f~~~~~L~~H~~~~H~  273 (606)
                      ..|..|.+.+....+|..|++..|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4688888888888888888887665

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=82.01  E-value=0.41  Score=36.07  Aligned_cols=28  Identities=39%  Similarity=0.713  Sum_probs=16.6

Q ss_pred             ccccccchhccChhhHHHHHhhhcCCCCccc
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRTHTNEKPYKC  563 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C  563 (606)
                      ..|-.||+.|.   .|.+|+.+|+|..|..+
T Consensus        22 iiClecGK~fK---~LkRHL~~~hgltpeeY   49 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHHSMTPEEY   49 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTTCSCHHHH
T ss_pred             eEecccchhhH---HHHHHHHHccCCCHHHH
Confidence            45666666665   35566666666655444

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=80.76  E-value=0.64  Score=27.13  Aligned_cols=24  Identities=29%  Similarity=0.692  Sum_probs=21.6

Q ss_pred             ccCCCCCCcCCChHHHHHhhhccc
Q psy15165        501 LQCPHCPKTFPRKTELSNHIKGIH  524 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~~~H  524 (606)
                      -.|..|.+.|+...+|..|++..|
T Consensus        10 qhcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            459999999999999999999777

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	606
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	9e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	5e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.004
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	1e-07
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	5e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	8e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.001
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.002
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.004
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	3e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	9e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	5e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.002
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	4e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.001
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.002

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (118), Expect = 9e-09
 Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 1/36 (2%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHMR-VHTNEKPYKCK 401
            K YIC+ C K F+  ++L  H++ VHT+E+P+KC+
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (110), Expect = 1e-07
 Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 1/32 (3%)

Query: 533 FVCEYCNKEFTFLQYLKRHMR-THTNEKPYKC 563
           ++C+ C K F+   +L  H++  HT+E+P+KC
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (83), Expect = 5e-04
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)

Query: 338 HVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICE 373
           ++C  CGK F+R   L  HIK +H     E+ + C+
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTS---ERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.004
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 395 EKPYKCKDCGAAFNHNVSLKNH 416
            KPY C+ CG  F+    L  H
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGH 24

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (109), Expect = 1e-07
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 369 TYICEY--CHKEFTFYNYLRRHMRVHTNEKPYKCK 401
           ++ C    C K F F  +L+ HM++H++ + Y C+
Sbjct: 1   SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (107), Expect = 2e-07
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 532 TFVCEY--CNKEFTFLQYLKRHMRTHTNEKPYKC 563
           +F C    C K F F ++LK HM+ H++ + Y C
Sbjct: 1   SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (104), Expect = 5e-07
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 387 RHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           R        + YKC +CG +F+H+  L  H+
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHR 32

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 2e-04
 Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)

Query: 550 RHMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
           R        + YKC  CG  F+ +  L  H+
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHR 32

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 0.001
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNE 395
            +  + Y C+ C K F+  + L +H R HT E
Sbjct: 7   QRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 1e-06
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           +K Y C+ C K FT  +   RHM +H   +PY C  CG  F     L  H 
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 50

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 8e-05
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 505 HCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTH 555
            C K+F  K++   H+            + C  C K+F    +L  HM+ H
Sbjct: 7   QCGKSFTHKSQRDRHMSMHLGLR----PYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 9e-05
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 342 HCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVH 392
            CGK FT K++   H+            Y C  C K+F   ++L  HM++H
Sbjct: 7   QCGKSFTHKSQRDRHMSMHLGLRP----YGCGVCGKKFKMKHHLVGHMKIH 53

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 2e-06
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 390 RVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           R H+ EKPY+C  C A F  + ++K H 
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHI 28

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 2e-04
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)

Query: 553 RTHTNEKPYKC-VCGLGFNFNVSLKNHKQK 581
           RTH+ EKPY+C +C   F  + ++K H  +
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQ 30

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.003
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRH-MRVHTNE 395
           H  EK Y C  CH  FT    ++ H ++ HT  
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.4 bits (100), Expect = 2e-06
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 388 HMRVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
             R  T  KP++C DC  +F+ +  L  H+
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHR 31

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (80), Expect = 0.001
 Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 551 HMRTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
             R  T  KP++C  C   F+ +  L  H+
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHR 31

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.9 bits (78), Expect = 0.002
 Identities = 7/31 (22%), Positives = 13/31 (41%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTN 394
               K + C  C + F+  ++L  H + H  
Sbjct: 6   STGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 4e-06
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 391 VHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           +H+ EKPY C +CG AF+ +  L  H+
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQ 27

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 15/32 (46%), Positives = 18/32 (56%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNE 395
           H  EK Y C  C K F+  + L +H RVHT E
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNE 558
           + C  C K F+    L +H R HT E
Sbjct: 8   YGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (98), Expect = 4e-06
 Identities = 12/28 (42%), Positives = 12/28 (42%)

Query: 390 RVHTNEKPYKCKDCGAAFNHNVSLKNHK 417
           R HT EKPY C  C   F     L  H 
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHF 28

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 3e-05
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEK 396
           H  EK Y C +C K F     L  H + + +  
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 6e-04
 Identities = 7/27 (25%), Positives = 13/27 (48%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEK 559
           + C +C+K F   Q L  H + + +  
Sbjct: 9   YACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.004
 Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)

Query: 553 RTHTNEKPYKC-VCGLGFNFNVSLKNHK 579
           RTHT EKPY C  C   F     L  H 
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHF 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEK 559
           FVCE C + F   ++LKRH R+HTNEK
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 38.8 bits (91), Expect = 3e-05
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 368 KTYICEYCHKEFTFYNYLRRHMRVHTNEK 396
           ++++CE C + F    +L+RH R HTNEK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.5 bits (92), Expect = 2e-05
 Identities = 9/38 (23%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 361 HLKHQLEKTYICEYC--HKEFTFYNYLRRHMRVHTNEK 396
           ++K   +KT+ C +    K F     +R H++ H  ++
Sbjct: 10  YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.1 bits (78), Expect = 0.002
 Identities = 9/38 (23%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 524 HMKHELRQTFVCEYC--NKEFTFLQYLKRHMRTHTNEK 559
           ++K    +TF C +    K F     ++ H++TH  ++
Sbjct: 10  YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 4e-05
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 368 KTYICEYCHKEFTFYNYLRRHMRVHTNEK 396
           K + C  C K F   ++L +H++ H N+K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 9e-05
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNEK 559
           F C  C K F    +L +H++TH N+K
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.4 bits (87), Expect = 1e-04
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 364 HQLEKTYICEYCHKEFTFYNYLRRHMRVHTNE 395
              ++ ++C  C   FT      RH++VHT+ 
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (82), Expect = 5e-04
 Identities = 6/26 (23%), Positives = 13/26 (50%)

Query: 392 HTNEKPYKCKDCGAAFNHNVSLKNHK 417
            + ++P+ C+ C +AF    +   H 
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHL 27

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.0 bits (78), Expect = 0.002
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHTNE 558
           FVC  C   FT      RH++ HT+ 
Sbjct: 8   FVCRICLSAFTTKANCARHLKVHTDT 33

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 367 EKTYICEYCHKEFTFYNYLRRHMRVHT 393
           +K + C  C + F+  ++L  H+R HT
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHT 27

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 395 EKPYKCKDCGAAFNHNVSLKNHK 417
           +KP++C+ C   F+ +  L  H 
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHI 23

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.1 bits (79), Expect = 0.001
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 533 FVCEYCNKEFTFLQYLKRHMRTHT 556
           F C  C + F+   +L  H+RTHT
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHT 27

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 0.001
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 533 FVCEY--CNKEFTFLQYLKRHMRTHTNEK 559
           F+C +  C K FT    L+RH RTHT EK
Sbjct: 3   FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.001
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 368 KTYICEY--CHKEFTFYNYLRRHMRVHTNEK 396
           + ++C +  C K FT  + L+RH R HT EK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 0.002
 Identities = 13/22 (59%), Positives = 16/22 (72%)

Query: 396 KPYKCKDCGAAFNHNVSLKNHK 417
           KPYKC +CG AF+ N  L NH+
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQ 22

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	606
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.63
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.47
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.23
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.18
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.18
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.15
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.11
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.08
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.07
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.06
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.05
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.03
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.03
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.0
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.99
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.96
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.94
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.93
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.84
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.84
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.84
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.83
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.81
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.81
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.8
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.79
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.76
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.73
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.64
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.59
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.56
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.55
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.51
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.51
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.48
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.45
d1v65a_	64	hypotheical protein 2610044O15Rik {Mouse (Mus musc	98.44
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.36
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.29
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.26
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.22
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.21
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.18
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.16
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.13
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.97
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.92
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.87
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.82
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.81
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.77
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.71
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.62
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.59
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.57
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.5
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.44
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.42
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.39
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.33
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.32
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.28
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.24
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.13
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.02
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.0
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.99
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.98
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.96
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.89
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.88
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.81
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.77
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.66
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.62
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.59
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.52
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.46
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.42
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.39
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.32
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.27
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.96
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.67
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.52
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.04
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.02
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.99
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.96
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.91
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.91
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.82
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.8
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.76
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.74
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.18
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.04
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.03
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.93
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.86
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.84
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.7
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.02
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.48
d1y0jb1	36	U-shaped transcription factor, different fingers {	91.04
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.01
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.52
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.1
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	87.36
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	86.9
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	86.08
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	82.51
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	81.46
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	80.98
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	80.19

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=6.6e-17  Score=112.55  Aligned_cols=52  Identities=33%  Similarity=0.678  Sum_probs=48.7

Q ss_pred             CccccccccchhccChhhHHHHHhhhcCCCCcccc-cCccCCchhhHHHhhhcc
Q psy15165        530 RQTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKC  582 (606)
Q Consensus       530 ~k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h  582 (606)
                      ||||+|+ ||++|.....|..|+++|+|++||.|. ||++|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5899995 999999999999999999999999998 999999999999999987

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=7.9e-15  Score=101.82  Aligned_cols=52  Identities=29%  Similarity=0.637  Sum_probs=49.1

Q ss_pred             ccccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccchhccChhhHHHHHhhh
Q psy15165        499 FFLQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNKEFTFLQYLKRHMRTH  555 (606)
Q Consensus       499 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k~f~~~~~L~~H~~~H  555 (606)
                      ++|.|+ ||++|.....|..|++ +|   ++++||.|.+||++|.+.+.|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~-~H---t~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMS-MH---LGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHH-HH---SCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhh-cc---ccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            359995 9999999999999998 67   9999999999999999999999999988

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1.7e-12  Score=81.37  Aligned_cols=35  Identities=34%  Similarity=0.844  Sum_probs=29.2

Q ss_pred             CCccccccccchhccChhhHHHHHh-hhcCCCCccc
Q psy15165        529 LRQTFVCEYCNKEFTFLQYLKRHMR-THTNEKPYKC  563 (606)
Q Consensus       529 ~~k~y~C~~C~k~f~~~~~L~~H~~-~H~~~kp~~C  563 (606)
                      .+|||+|..||++|++.+.|.+|++ +|+|++||.|
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCC
Confidence            4678888888888888888888875 6888888888

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=4.4e-12  Score=76.14  Aligned_cols=32  Identities=34%  Similarity=0.587  Sum_probs=24.3

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCC
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      |+++|||+|..||++|.+.+.|.+|+++|+||
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            37777777777777777777777777777775

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=1.5e-12  Score=81.91  Aligned_cols=31  Identities=39%  Similarity=0.734  Sum_probs=19.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCC
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      ++++||.|+.||++|...+.|.+|+++|+||
T Consensus         8 t~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           8 RERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5666666666666666666666666666654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=5.4e-12  Score=79.36  Aligned_cols=36  Identities=25%  Similarity=0.532  Sum_probs=33.8

Q ss_pred             HHHhhhcCCCCcccc-cCccCCchhhHHHhhhccccc
Q psy15165        550 RHMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       550 ~H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      +|+++|++++||.|. ||++|.+.++|..|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            588999999999998 999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.2e-11  Score=74.17  Aligned_cols=32  Identities=38%  Similarity=0.687  Sum_probs=30.7

Q ss_pred             hhcCCCCcccc-cCccCCchhhHHHhhhccccc
Q psy15165        554 THTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       554 ~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      +|+|++||.|. ||++|.+.+.|..|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            59999999998 999999999999999999985

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=1.2e-11  Score=77.12  Aligned_cols=32  Identities=28%  Similarity=0.567  Sum_probs=16.2

Q ss_pred             HHhhhcCCCCcccc-cCccCCchhhHHHhhhcc
Q psy15165        551 HMRTHTNEKPYKCV-CGLGFNFNVSLKNHKQKC  582 (606)
Q Consensus       551 H~~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h  582 (606)
                      |.|+|+|++||.|. |+++|.+++.|..|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            34445555555554 555555555555555544

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.07  E-value=2.4e-11  Score=70.74  Aligned_cols=29  Identities=55%  Similarity=1.004  Sum_probs=23.9

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      +||.|++||++|++.+.|.+|+++||||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57888888888888888888888888875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2e-11  Score=75.51  Aligned_cols=31  Identities=23%  Similarity=0.494  Sum_probs=19.8

Q ss_pred             CCCccccccccchhccChhhHHHHHhhhcCC
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      +|++||+|.+||++|...+.|..|+++|+++
T Consensus         4 TgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           4 TGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             CCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            6666666666666666666666666666554

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.8e-11  Score=75.11  Aligned_cols=37  Identities=43%  Similarity=0.850  Sum_probs=30.6

Q ss_pred             CCCcccccccccccCchHHHHhhhh-hcCCCCccccCc
Q psy15165        366 LEKTYICEYCHKEFTFYNYLRRHMR-VHTNEKPYKCKD  402 (606)
Q Consensus       366 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~  402 (606)
                      .++||+|.+||+.|...+.|..|++ +|+|++||.|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3678888888888888888888875 688888888864

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=3.4e-11  Score=73.25  Aligned_cols=32  Identities=31%  Similarity=0.611  Sum_probs=25.8

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcCC
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      |+|+|||+|.+|++.|++++.|.+|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            47888888888888888888888888888765

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.03  E-value=3.4e-11  Score=69.08  Aligned_cols=28  Identities=36%  Similarity=0.751  Sum_probs=23.2

Q ss_pred             CccccccccchhccChhhHHHHHhhhcC
Q psy15165        530 RQTFVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       530 ~k~y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      ||||+|++|+++|++++.|.+|+++|||
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5788888888888888888888888876

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=5e-11  Score=69.17  Aligned_cols=29  Identities=38%  Similarity=0.755  Sum_probs=23.7

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      |||.|++||++|++++.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57888888888888888888888888875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=4.2e-11  Score=73.81  Aligned_cols=27  Identities=22%  Similarity=0.424  Sum_probs=15.2

Q ss_pred             CCCccccccccchhccChhhHHHHHhh
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMRT  554 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~~  554 (606)
                      +|++||+|++|+++|+++++|.+|++.
T Consensus         4 TgekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           4 SGEKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             SCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCCCCEeCCCCcccccchHHHHHHccc
Confidence            555555555555555555555555443

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=8.5e-11  Score=72.60  Aligned_cols=33  Identities=39%  Similarity=0.612  Sum_probs=31.2

Q ss_pred             hhhcCCCCcccc-cCccCCchhhHHHhhhccccc
Q psy15165        553 RTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       553 ~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      |+|+|++||.|. ||++|.+.+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            689999999998 999999999999999999865

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.96  E-value=1.3e-10  Score=72.39  Aligned_cols=31  Identities=23%  Similarity=0.402  Sum_probs=28.9

Q ss_pred             CCCCccccccccchhccChhhHHHHHhhhcC
Q psy15165        527 HELRQTFVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       527 ~~~~k~y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      |+|+|||+|+.|+++|++++.|.+|+++|.+
T Consensus         6 HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           6 STGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             cCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            3999999999999999999999999999975

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.94  E-value=1.7e-10  Score=70.14  Aligned_cols=31  Identities=16%  Similarity=0.387  Sum_probs=29.3

Q ss_pred             hcCCCCcccc-cCccCCchhhHHHhhhccccc
Q psy15165        555 HTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       555 H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      |+|++||.|. |+++|.++++|.+|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            7999999998 999999999999999999864

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.6e-10  Score=70.96  Aligned_cols=32  Identities=41%  Similarity=0.911  Sum_probs=26.6

Q ss_pred             ccccc--cchhccChhhHHHHHhhhcCCCCcccc
Q psy15165        533 FVCEY--CNKEFTFLQYLKRHMRTHTNEKPYKCV  564 (606)
Q Consensus       533 y~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~  564 (606)
                      |.|++  ||++|.++..|++|+++|+|++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67876  888888888888888888888888883

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.84  E-value=3.1e-10  Score=74.49  Aligned_cols=33  Identities=27%  Similarity=0.619  Sum_probs=28.6

Q ss_pred             CCCCccccccc--cchhccChhhHHHHHhhhcCCC
Q psy15165        527 HELRQTFVCEY--CNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       527 ~~~~k~y~C~~--C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      |++++||.|.+  |+++|+..+.|..|+++|+|++
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            38889999987  9999999999999999998875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.84  E-value=6.2e-10  Score=64.62  Aligned_cols=28  Identities=21%  Similarity=0.381  Sum_probs=26.8

Q ss_pred             CCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      +||.|. |+++|++.+.|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            699998 9999999999999999999985

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=6.5e-10  Score=68.41  Aligned_cols=33  Identities=36%  Similarity=0.622  Sum_probs=29.8

Q ss_pred             hhhcCCCCcccc-cCccCCchhhHHHhhhccccc
Q psy15165        553 RTHTNEKPYKCV-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       553 ~~H~~~kp~~C~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      |+|+|++||.|. |+++|+++++|.+|++++|++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            589999999998 999999999999998877654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.83  E-value=4.2e-10  Score=64.44  Aligned_cols=27  Identities=26%  Similarity=0.547  Sum_probs=25.9

Q ss_pred             CCCcccc-cCccCCchhhHHHhhhcccc
Q psy15165        558 EKPYKCV-CGLGFNFNVSLKNHKQKCSV  584 (606)
Q Consensus       558 ~kp~~C~-C~~~F~~~~~L~~H~~~h~~  584 (606)
                      ||||.|. |+++|.+++.|..|+|+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6999998 99999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=5.6e-10  Score=62.08  Aligned_cols=26  Identities=35%  Similarity=0.577  Sum_probs=20.0

Q ss_pred             ccccccccchhccChhhHHHHHhhhc
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                      |||+|..||++|...+.|.+|+|+||
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57777777777777777777777775

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=9.1e-10  Score=64.13  Aligned_cols=28  Identities=39%  Similarity=0.877  Sum_probs=22.0

Q ss_pred             ccccccc--cchhccChhhHHHHHhhhcCC
Q psy15165        531 QTFVCEY--CNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       531 k~y~C~~--C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      |||.|++  |+++|++.+.|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5778877  888888888888888888775

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=9.9e-10  Score=63.59  Aligned_cols=28  Identities=21%  Similarity=0.298  Sum_probs=26.7

Q ss_pred             CCcccc-cCccCCchhhHHHhhhcccccc
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      |||.|. ||++|.+++.|.+|+|+|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            699998 9999999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=8.6e-10  Score=64.40  Aligned_cols=28  Identities=36%  Similarity=0.850  Sum_probs=22.2

Q ss_pred             ccccccc--cchhccChhhHHHHHhhhcCC
Q psy15165        531 QTFVCEY--CNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       531 k~y~C~~--C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      |||.|++  ||++|++.+.|.+|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5788877  888888888888888888875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.5e-09  Score=64.00  Aligned_cols=29  Identities=52%  Similarity=0.934  Sum_probs=17.9

Q ss_pred             ccccccc--cchhccChhhHHHHHhhhcCCC
Q psy15165        531 QTFVCEY--CNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       531 k~y~C~~--C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      +||.|++  ||++|++.+.|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            4566643  6666666666666666666654

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.73  E-value=2.3e-10  Score=75.17  Aligned_cols=41  Identities=15%  Similarity=0.301  Sum_probs=36.3

Q ss_pred             hhhHHHHHhhhcCCCCccc--c-cCccCCchhhHHHhhhcccccc
Q psy15165        545 LQYLKRHMRTHTNEKPYKC--V-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       545 ~~~L~~H~~~H~~~kp~~C--~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      +..|.+|+. |+|++||.|  . |+++|.+.+.|..|+++|+|++
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            345677775 999999999  4 9999999999999999999975

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=4.2e-09  Score=64.45  Aligned_cols=32  Identities=34%  Similarity=0.916  Sum_probs=27.1

Q ss_pred             ccccc--cccccCchHHHHhhhhhcCCCCccccC
Q psy15165        370 YICEY--CHKEFTFYNYLRRHMRVHTNEKPYKCK  401 (606)
Q Consensus       370 ~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~  401 (606)
                      |.|+.  |++.|.....|++|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67776  888888888888888888888888886

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=5.5e-09  Score=57.99  Aligned_cols=25  Identities=48%  Similarity=0.971  Sum_probs=23.9

Q ss_pred             CCcccc-cCccCCchhhHHHhhhccc
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~~h~  583 (606)
                      |||.|. ||++|.+.+.|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            799998 9999999999999999985

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.6e-08  Score=59.52  Aligned_cols=28  Identities=29%  Similarity=0.590  Sum_probs=26.3

Q ss_pred             CCccc--c-cCccCCchhhHHHhhhcccccc
Q psy15165        559 KPYKC--V-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       559 kp~~C--~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      +||.|  + |+++|++.+.|..|+|+|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            69999  4 9999999999999999999985

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.55  E-value=8.3e-09  Score=59.39  Aligned_cols=27  Identities=33%  Similarity=0.790  Sum_probs=18.2

Q ss_pred             ccccccc--cchhccChhhHHHHHhhhcC
Q psy15165        531 QTFVCEY--CNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       531 k~y~C~~--C~k~f~~~~~L~~H~~~H~~  557 (606)
                      |||.|++  |+++|++.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4666766  77777777777777766665

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2.2e-08  Score=58.19  Aligned_cols=27  Identities=30%  Similarity=0.436  Sum_probs=25.4

Q ss_pred             CCccc--c-cCccCCchhhHHHhhhccccc
Q psy15165        559 KPYKC--V-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       559 kp~~C--~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      |||.|  + |+++|++.+.|.+|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            69999  4 999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.51  E-value=2.4e-08  Score=58.98  Aligned_cols=28  Identities=29%  Similarity=0.664  Sum_probs=18.9

Q ss_pred             Cccccccc--cchhccChhhHHHHHhhhcC
Q psy15165        530 RQTFVCEY--CNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       530 ~k~y~C~~--C~k~f~~~~~L~~H~~~H~~  557 (606)
                      ++||.|++  |+++|++.+.|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46677766  77777777777777777664

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=1.7e-08  Score=58.84  Aligned_cols=27  Identities=30%  Similarity=0.721  Sum_probs=25.3

Q ss_pred             CCccc--c-cCccCCchhhHHHhhhccccc
Q psy15165        559 KPYKC--V-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       559 kp~~C--~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      |||.|  + |+++|++.+.|.+|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            69999  4 999999999999999999985

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=2.2e-08  Score=56.81  Aligned_cols=26  Identities=42%  Similarity=0.894  Sum_probs=16.2

Q ss_pred             ccccccc--cchhccChhhHHHHHhhhc
Q psy15165        531 QTFVCEY--CNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       531 k~y~C~~--C~k~f~~~~~L~~H~~~H~  556 (606)
                      |||.|++  ||++|++.+.|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4566665  6666666666666666664

>d1v65a_ a.212.1.1 (A:) hypotheical protein 2610044O15Rik {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: KRAB domain (Kruppel-associated box)
superfamily: KRAB domain (Kruppel-associated box)
family: KRAB domain (Kruppel-associated box)
domain: hypotheical protein 2610044O15Rik
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.44  E-value=1.4e-08  Score=69.95  Aligned_cols=30  Identities=13%  Similarity=0.293  Sum_probs=26.8

Q ss_pred             ccccccccc---------ccccCCCceeeecccCCCCce
Q psy15165          2 YDDDWNNLD---------DHVGKPSRRRSLGVESSVPKL   31 (606)
Q Consensus         2 ~~~~~~~~~---------~~~~~~~~~~~~g~~~~~~~~   31 (606)
                      ..|||..||         ||||||+||+|||+.+.+|++
T Consensus        18 s~EEW~~Ld~~Qk~LyrdVm~Eny~~l~slg~~~~~~~~   56 (64)
T d1v65a_          18 TEEEWDLLDSSQKRLYEEVMLETYQNLTDIGYNWQDHHI   56 (64)
T ss_dssp             CHHHHHTSCHHHHHHHHHHHHHTTTSCCCSCCCCCCCCC
T ss_pred             CHHHHhCcCHHHHHHHHHhHHHHhhhhheeccCcCCCCc
Confidence            368999885         799999999999999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=7.1e-08  Score=50.33  Aligned_cols=25  Identities=48%  Similarity=0.756  Sum_probs=15.1

Q ss_pred             ccccccchhccChhhHHHHHhhhcC
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      .+|++|++.|+.+..|..|||.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4566666666666666666666654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.29  E-value=8.2e-08  Score=55.15  Aligned_cols=26  Identities=27%  Similarity=0.597  Sum_probs=24.5

Q ss_pred             CCccc--c-cCccCCchhhHHHhhhcccc
Q psy15165        559 KPYKC--V-CGLGFNFNVSLKNHKQKCSV  584 (606)
Q Consensus       559 kp~~C--~-C~~~F~~~~~L~~H~~~h~~  584 (606)
                      |||.|  + |+++|++.+.|.+|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            69999  4 99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.26  E-value=2.3e-07  Score=54.68  Aligned_cols=27  Identities=33%  Similarity=0.673  Sum_probs=25.3

Q ss_pred             CCCccc--c-cCccCCchhhHHHhhhcccc
Q psy15165        558 EKPYKC--V-CGLGFNFNVSLKNHKQKCSV  584 (606)
Q Consensus       558 ~kp~~C--~-C~~~F~~~~~L~~H~~~h~~  584 (606)
                      |+||.|  + |+++|++.+.|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            689999  4 99999999999999999985

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=1.5e-07  Score=53.33  Aligned_cols=25  Identities=32%  Similarity=0.666  Sum_probs=23.4

Q ss_pred             CCccc--c-cCccCCchhhHHHhhhccc
Q psy15165        559 KPYKC--V-CGLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       559 kp~~C--~-C~~~F~~~~~L~~H~~~h~  583 (606)
                      +||.|  + |+++|++.++|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            69999  4 9999999999999999986

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=2.7e-07  Score=49.43  Aligned_cols=29  Identities=28%  Similarity=0.544  Sum_probs=21.9

Q ss_pred             CccccccccchhccChhhHHHHHhhhcCC
Q psy15165        530 RQTFVCEYCNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       530 ~k~y~C~~C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      ++||+|..|.+.-...+.|..|+|+|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46777777777777777777777777763

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.18  E-value=3.8e-07  Score=49.33  Aligned_cols=27  Identities=30%  Similarity=0.701  Sum_probs=19.6

Q ss_pred             CccccccccchhccChhhHHHHHhhhc
Q psy15165        530 RQTFVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       530 ~k~y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                      ++||.|++||+.|..+...++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            467777777777777777777777764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=5.8e-07  Score=46.85  Aligned_cols=25  Identities=36%  Similarity=0.571  Sum_probs=23.5

Q ss_pred             Ccccc-cCccCCchhhHHHhhhcccc
Q psy15165        560 PYKCV-CGLGFNFNVSLKNHKQKCSV  584 (606)
Q Consensus       560 p~~C~-C~~~F~~~~~L~~H~~~h~~  584 (606)
                      |.+|. |++.|+++..|+.|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67898 99999999999999999986

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=5e-07  Score=50.79  Aligned_cols=32  Identities=41%  Similarity=0.753  Sum_probs=25.4

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCCCCcc
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEKPYK  562 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~kp~~  562 (606)
                      +...|+.||+.|.....|.+|...|+|++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            34568888888888888888888888888873

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=1.7e-06  Score=47.42  Aligned_cols=29  Identities=21%  Similarity=0.559  Sum_probs=22.2

Q ss_pred             CccccccccchhccChhhHHHHHhhhcCC
Q psy15165        530 RQTFVCEYCNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       530 ~k~y~C~~C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      ++||.|++|+..|..+..+..|.|+|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            46788888888888888888888877764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=3e-06  Score=45.69  Aligned_cols=27  Identities=37%  Similarity=0.742  Sum_probs=20.7

Q ss_pred             ccccccchhccChhhHHHHHhhhcCCC
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      |.|++||......+-|+.|+|+||+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            677778777777778888888777764

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.87  E-value=3.5e-06  Score=45.56  Aligned_cols=26  Identities=35%  Similarity=0.611  Sum_probs=24.4

Q ss_pred             CCCcccc-cCccCCchhhHHHhhhccc
Q psy15165        558 EKPYKCV-CGLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       558 ~kp~~C~-C~~~F~~~~~L~~H~~~h~  583 (606)
                      ++||.|. ||+.|+.+...++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            6899998 9999999999999999985

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=5.4e-06  Score=46.54  Aligned_cols=32  Identities=44%  Similarity=0.672  Sum_probs=26.8

Q ss_pred             CcccccccccccCchHHHHhhhhhcCCCCccc
Q psy15165        368 KTYICEYCHKEFTFYNYLRRHMRVHTNEKPYK  399 (606)
Q Consensus       368 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~  399 (606)
                      +...|..||+.|.....|.+|...|++++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            45678889999998888999988999988873

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=4.8e-06  Score=44.51  Aligned_cols=28  Identities=25%  Similarity=0.440  Sum_probs=26.2

Q ss_pred             CCCcccc-cCccCCchhhHHHhhhccccc
Q psy15165        558 EKPYKCV-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       558 ~kp~~C~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      ++||+|. |.++-...+.|..|+|.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            5899998 999999999999999999974

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=4.9e-06  Score=44.26  Aligned_cols=26  Identities=46%  Similarity=0.686  Sum_probs=17.0

Q ss_pred             ccccccchhccChhhHHHHHhhhcCC
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      ..|..||++|.-.+.|++|..+|||+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            35666666666666666666666664

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=9.6e-06  Score=42.43  Aligned_cols=26  Identities=50%  Similarity=0.778  Sum_probs=20.2

Q ss_pred             cccccchhccChhhHHHHHhhhcCCC
Q psy15165        534 VCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       534 ~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      +|+.|.++|.++..|+.|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57778888888888888888888764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.2e-05  Score=44.19  Aligned_cols=26  Identities=31%  Similarity=0.580  Sum_probs=15.0

Q ss_pred             CCccc--c-cCccCCchhhHHHhhhcccc
Q psy15165        559 KPYKC--V-CGLGFNFNVSLKNHKQKCSV  584 (606)
Q Consensus       559 kp~~C--~-C~~~F~~~~~L~~H~~~h~~  584 (606)
                      +||.|  . |++++...++|++|++.+||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            45666  2 66666666666666665543

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.5e-05  Score=43.75  Aligned_cols=27  Identities=30%  Similarity=0.713  Sum_probs=21.4

Q ss_pred             ccccccc--cchhccChhhHHHHHhhhcC
Q psy15165        531 QTFVCEY--CNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       531 k~y~C~~--C~k~f~~~~~L~~H~~~H~~  557 (606)
                      +||.|.+  |+++++..++|+.|+++++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5788877  88888888888888887664

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=1.8e-05  Score=41.96  Aligned_cols=26  Identities=23%  Similarity=0.581  Sum_probs=17.5

Q ss_pred             ccccccccchhccChhhHHHHHhhhc
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                      +||+|..|.++-...+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            46666666666666666666666664

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=3.1e-05  Score=42.36  Aligned_cols=29  Identities=21%  Similarity=0.508  Sum_probs=26.9

Q ss_pred             CCcccCCCCCCccCCHHHHHHHHHHhcCC
Q psy15165        442 EVSNLCYICGFFSAKRSTLAHHIQDHIQP  470 (606)
Q Consensus       442 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  470 (606)
                      ++||.|++|+..|..+..+..|++.|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57999999999999999999999999764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=7.1e-05  Score=40.25  Aligned_cols=28  Identities=36%  Similarity=0.631  Sum_probs=25.7

Q ss_pred             cccCCCCCCccCCHHHHHHHHHHhcCCC
Q psy15165        444 SNLCYICGFFSAKRSTLAHHIQDHIQPR  471 (606)
Q Consensus       444 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~  471 (606)
                      .|.|+.||......+.|..|++.|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            3789999999999999999999999864

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=4.5e-05  Score=40.53  Aligned_cols=26  Identities=42%  Similarity=0.681  Sum_probs=20.5

Q ss_pred             ccccccccccCchHHHHhhhhhcCCC
Q psy15165        370 YICEYCHKEFTFYNYLRRHMRVHTNE  395 (606)
Q Consensus       370 ~~C~~C~k~f~~~~~L~~H~~~H~~~  395 (606)
                      ..|..||+.|...+.|++|..+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46788888888888888888888774

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.39  E-value=4.4e-05  Score=40.93  Aligned_cols=29  Identities=38%  Similarity=0.673  Sum_probs=25.0

Q ss_pred             CccccccccchhccChhhHHHHHhhhcCC
Q psy15165        530 RQTFVCEYCNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       530 ~k~y~C~~C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      +..|.|..|...|...-.|+.||..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45688999999999999999999999885

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=5e-05  Score=40.18  Aligned_cols=26  Identities=38%  Similarity=0.598  Sum_probs=24.3

Q ss_pred             CCCcccc-cCccCCchhhHHHhhhccc
Q psy15165        558 EKPYKCV-CGLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       558 ~kp~~C~-C~~~F~~~~~L~~H~~~h~  583 (606)
                      .+||+|. |.++-...+.|.+|+|+|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            4799998 9999999999999999986

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.32  E-value=4.8e-05  Score=39.04  Aligned_cols=23  Identities=35%  Similarity=0.766  Sum_probs=11.5

Q ss_pred             ccccccchhccChhhHHHHHhhh
Q psy15165        533 FVCEYCNKEFTFLQYLKRHMRTH  555 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~~~H  555 (606)
                      |+|..|.++|.-++.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            34555555555555555555444

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=8.2e-05  Score=40.16  Aligned_cols=23  Identities=35%  Similarity=0.686  Sum_probs=12.2

Q ss_pred             cccccccchhccChhhHHHHHhh
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHMRT  554 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~~~  554 (606)
                      ||.|.+|.+.....++|+.|+++
T Consensus         2 py~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhhc
Confidence            45555555555555555555544

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.24  E-value=6.8e-05  Score=39.17  Aligned_cols=25  Identities=28%  Similarity=0.324  Sum_probs=23.4

Q ss_pred             ccc-cCccCCchhhHHHhhhcccccc
Q psy15165        562 KCV-CGLGFNFNVSLKNHKQKCSVFL  586 (606)
Q Consensus       562 ~C~-C~~~F~~~~~L~~H~~~h~~~~  586 (606)
                      .|+ |.++|.++..|+.|-|+|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            598 9999999999999999999975

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.13  E-value=9.1e-05  Score=39.84  Aligned_cols=28  Identities=50%  Similarity=0.803  Sum_probs=16.6

Q ss_pred             ccccccc--cchhccChhhHHHHHhhhcCC
Q psy15165        531 QTFVCEY--CNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       531 k~y~C~~--C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      +||.|.+  |.+.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            3555654  666666666666666666653

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.02  E-value=0.00016  Score=43.02  Aligned_cols=29  Identities=31%  Similarity=0.814  Sum_probs=20.6

Q ss_pred             ccccccccchhccChhhHHHHHhhhcCCC
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRTHTNEK  559 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~H~~~k  559 (606)
                      +.|.|.+|++.|.+..+|--||+.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            45777777777777777777777776543

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.00  E-value=0.00017  Score=38.61  Aligned_cols=18  Identities=28%  Similarity=0.547  Sum_probs=8.8

Q ss_pred             cCccCCchhhHHHhhhcc
Q psy15165        565 CGLGFNFNVSLKNHKQKC  582 (606)
Q Consensus       565 C~~~F~~~~~L~~H~~~h  582 (606)
                      |++.|+..+.|++|.+.|
T Consensus        11 cdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2          11 CDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             ccccccCHHHHhhhhhcc
Confidence            555555555555554443

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00012  Score=39.26  Aligned_cols=23  Identities=35%  Similarity=0.816  Sum_probs=13.5

Q ss_pred             cccccccchhccChhhHHHHHhh
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHMRT  554 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~~~  554 (606)
                      ||.|..|+.+|.++.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            45566666666666666666553

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.00016  Score=43.04  Aligned_cols=27  Identities=37%  Similarity=0.802  Sum_probs=18.9

Q ss_pred             cCCCCcccc-cCccCCchhhHHHhhhcc
Q psy15165        556 TNEKPYKCV-CGLGFNFNVSLKNHKQKC  582 (606)
Q Consensus       556 ~~~kp~~C~-C~~~F~~~~~L~~H~~~h  582 (606)
                      +|.|||.|. |++.|.++..+.+|.-.+
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhh
Confidence            466777776 777777777777776554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00011  Score=40.67  Aligned_cols=24  Identities=29%  Similarity=0.654  Sum_probs=11.7

Q ss_pred             CCccc--c-cCccCCchhhHHHhh-hcc
Q psy15165        559 KPYKC--V-CGLGFNFNVSLKNHK-QKC  582 (606)
Q Consensus       559 kp~~C--~-C~~~F~~~~~L~~H~-~~h  582 (606)
                      +||.|  + |.++|+..+...+|. |+|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CCccccCCChhhhhcchhhhhhhccccc
Confidence            34555  2 555555555555553 444

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.89  E-value=0.00035  Score=35.81  Aligned_cols=24  Identities=42%  Similarity=0.813  Sum_probs=18.0

Q ss_pred             ccccccccccCchHHHHhhhhhcC
Q psy15165        370 YICEYCHKEFTFYNYLRRHMRVHT  393 (606)
Q Consensus       370 ~~C~~C~k~f~~~~~L~~H~~~H~  393 (606)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            567777777777777777777774

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00022  Score=42.43  Aligned_cols=26  Identities=23%  Similarity=0.589  Sum_probs=23.3

Q ss_pred             CCCccccccccchhccChhhHHHHHh
Q psy15165        528 ELRQTFVCEYCNKEFTFLQYLKRHMR  553 (606)
Q Consensus       528 ~~~k~y~C~~C~k~f~~~~~L~~H~~  553 (606)
                      +|.+||.|..|++.|-....+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            47789999999999999999999974

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.00025  Score=38.10  Aligned_cols=23  Identities=30%  Similarity=0.784  Sum_probs=21.3

Q ss_pred             Ccccc-cCccCCchhhHHHhhhcc
Q psy15165        560 PYKCV-CGLGFNFNVSLKNHKQKC  582 (606)
Q Consensus       560 p~~C~-C~~~F~~~~~L~~H~~~h  582 (606)
                      ||.|. |..+|.++.+|.+||+.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            89998 999999999999999853

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.77  E-value=0.00039  Score=37.21  Aligned_cols=28  Identities=36%  Similarity=0.638  Sum_probs=19.6

Q ss_pred             CcccccccccccCchHHHHhhhhhcCCC
Q psy15165        368 KTYICEYCHKEFTFYNYLRRHMRVHTNE  395 (606)
Q Consensus       368 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~  395 (606)
                      ..|.|..|...|..+-.|+.||..|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4567777777777777777777777664

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.66  E-value=0.00037  Score=37.27  Aligned_cols=25  Identities=36%  Similarity=0.786  Sum_probs=23.1

Q ss_pred             ccccccc--cchhccChhhHHHHHhhh
Q psy15165        531 QTFVCEY--CNKEFTFLQYLKRHMRTH  555 (606)
Q Consensus       531 k~y~C~~--C~k~f~~~~~L~~H~~~H  555 (606)
                      .||+|+.  |++.|+..+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5899987  999999999999999887

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.62  E-value=0.00029  Score=38.89  Aligned_cols=21  Identities=38%  Similarity=0.778  Sum_probs=10.4

Q ss_pred             cccccccchhccChhhHHHHH
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHM  552 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~  552 (606)
                      ||.|.+|++.|+.+..|.+|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~   21 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHA   21 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHH
T ss_pred             CcccccccchhhHHHHHHHHH
Confidence            344555555555555555553

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.00029  Score=38.89  Aligned_cols=28  Identities=39%  Similarity=0.781  Sum_probs=25.4

Q ss_pred             ccccccc--cchhccChhhHHHHH-hhhcCC
Q psy15165        531 QTFVCEY--CNKEFTFLQYLKRHM-RTHTNE  558 (606)
Q Consensus       531 k~y~C~~--C~k~f~~~~~L~~H~-~~H~~~  558 (606)
                      +||.|.+  |.|+|+..+.-..|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6899999  999999999999997 889754

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.52  E-value=0.00076  Score=40.00  Aligned_cols=28  Identities=36%  Similarity=0.853  Sum_probs=18.3

Q ss_pred             CcccccccccccCchHHHHhhhhhcCCC
Q psy15165        368 KTYICEYCHKEFTFYNYLRRHMRVHTNE  395 (606)
Q Consensus       368 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~  395 (606)
                      +.|.|.+|++.|.+..+|--||+.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            4566666666666666666666666543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.00061  Score=40.00  Aligned_cols=27  Identities=37%  Similarity=0.741  Sum_probs=19.6

Q ss_pred             CCCCccc--c-cCccCCchhhHHHhhhccc
Q psy15165        557 NEKPYKC--V-CGLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       557 ~~kp~~C--~-C~~~F~~~~~L~~H~~~h~  583 (606)
                      .++||.|  + |+..|.+...|..|..+|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            3677777  4 7777777777777777764

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00051  Score=36.97  Aligned_cols=24  Identities=29%  Similarity=0.703  Sum_probs=14.0

Q ss_pred             ccccccccchhccChhhHHHHHhh
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHMRT  554 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~~~  554 (606)
                      +||+|.+|..-..+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            356666666666666666666554

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.0011  Score=35.65  Aligned_cols=25  Identities=32%  Similarity=0.499  Sum_probs=23.2

Q ss_pred             cccCCCCCCcCCChHHHHHhhhccc
Q psy15165        500 FLQCPHCPKTFPRKTELSNHIKGIH  524 (606)
Q Consensus       500 ~~~C~~C~~~f~~~~~L~~H~~~~H  524 (606)
                      +|+|.+|.+.....++|+.|++..|
T Consensus         2 py~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             Cccccccccccccchhhhhhhhccc
Confidence            5999999999999999999999777

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.00088  Score=36.04  Aligned_cols=26  Identities=27%  Similarity=0.600  Sum_probs=14.8

Q ss_pred             CCcccc-cCccCCchhhHHHhhhcccc
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQKCSV  584 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~~h~~  584 (606)
                      +||+|. |..-..+.++|.+|+++.|+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            355665 66555566666666555443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.27  E-value=0.00067  Score=36.41  Aligned_cols=27  Identities=30%  Similarity=0.514  Sum_probs=24.7

Q ss_pred             CCccc--c-cCccCCchhhHHHhhhccccc
Q psy15165        559 KPYKC--V-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       559 kp~~C--~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      +||.|  . |.++|.+.-.|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            69999  4 999999999999999999875

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0021  Score=33.99  Aligned_cols=25  Identities=24%  Similarity=0.339  Sum_probs=16.8

Q ss_pred             cccccccchhccChhhHHHHHhhhc
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                      |-+|+.|.++.+++..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3457777777777777777777664

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.67  E-value=0.0033  Score=34.66  Aligned_cols=26  Identities=31%  Similarity=0.758  Sum_probs=15.7

Q ss_pred             ccccccccccCCHHHHHHhHhhhcCC
Q psy15165        249 FKCRVCDWKLNSYDKLLRHIKSDHGG  274 (606)
Q Consensus       249 ~~C~~C~~~f~~~~~L~~H~~~~H~~  274 (606)
                      |.|.+|+..|....-|.+|....|++
T Consensus         2 f~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cccccccchhhHHHHHHHHHHHHhcC
Confidence            55666666666666666666555553

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.0036  Score=36.64  Aligned_cols=28  Identities=29%  Similarity=0.527  Sum_probs=23.3

Q ss_pred             CCccccccc--cchhccChhhHHHHHhhhc
Q psy15165        529 LRQTFVCEY--CNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       529 ~~k~y~C~~--C~k~f~~~~~L~~H~~~H~  556 (606)
                      .+|||.|..  |+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            478999944  9999999999999988775

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.04  E-value=0.0051  Score=32.24  Aligned_cols=21  Identities=29%  Similarity=0.483  Sum_probs=10.7

Q ss_pred             cccccccchhccChhhHHHHH
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHM  552 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~  552 (606)
                      ||+|..||+.+..+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            345555555555555555553

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.02  E-value=0.0042  Score=33.91  Aligned_cols=27  Identities=37%  Similarity=0.610  Sum_probs=20.1

Q ss_pred             CCccc--c-cCccCCchhhHHHhhhccccc
Q psy15165        559 KPYKC--V-CGLGFNFNVSLKNHKQKCSVF  585 (606)
Q Consensus       559 kp~~C--~-C~~~F~~~~~L~~H~~~h~~~  585 (606)
                      +.|.|  + |+..|...+.|..|+-+|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            45777  4 888888888888888777764

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.99  E-value=0.0058  Score=31.18  Aligned_cols=21  Identities=29%  Similarity=0.713  Sum_probs=10.3

Q ss_pred             cccccccchhccChhhHHHHH
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHM  552 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~  552 (606)
                      ||+|.-|...|-++..|+.||
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            344555555555555555444

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.96  E-value=0.0054  Score=32.29  Aligned_cols=24  Identities=38%  Similarity=0.962  Sum_probs=17.0

Q ss_pred             ccCCCCCCcCCChHHHHHhhhccc
Q psy15165        501 LQCPHCPKTFPRKTELSNHIKGIH  524 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~~~H  524 (606)
                      |+|+.|+-....++.|..|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            667777777777777777776554

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.91  E-value=0.0054  Score=31.43  Aligned_cols=24  Identities=46%  Similarity=0.934  Sum_probs=16.4

Q ss_pred             ccCCCCCCcCCChHHHHHhhhccc
Q psy15165        501 LQCPHCPKTFPRKTELSNHIKGIH  524 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~~~H  524 (606)
                      |.|+.|-+.|..+.++..|++.+|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            567777777777777777766444

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.91  E-value=0.0053  Score=35.20  Aligned_cols=16  Identities=19%  Similarity=0.200  Sum_probs=8.0

Q ss_pred             CCchhhHHHhhhcccc
Q psy15165        569 FNFNVSLKNHKQKCSV  584 (606)
Q Consensus       569 F~~~~~L~~H~~~h~~  584 (606)
                      |.....|..|||.|+|
T Consensus        17 f~a~YkLv~H~R~HTg   32 (33)
T d2glia2          17 FKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CSSHHHHHHHTHHHHC
T ss_pred             chhHHHHHHHHhhcCC
Confidence            4445555555555544

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.82  E-value=0.0084  Score=30.59  Aligned_cols=20  Identities=30%  Similarity=0.680  Sum_probs=8.0

Q ss_pred             cccccCccccCCHHHHHhhh
Q psy15165        215 FKCRVCDWKLNSYDKLLRHM  234 (606)
Q Consensus       215 ~~C~~C~~~f~~~~~l~~H~  234 (606)
                      |+|..|...|-.+..|..||
T Consensus         3 ykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           3 YKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHH
Confidence            34444444444444443333

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.80  E-value=0.0086  Score=31.38  Aligned_cols=22  Identities=27%  Similarity=0.738  Sum_probs=19.9

Q ss_pred             Ccccc-cCccCCchhhHHHhhhc
Q psy15165        560 PYKCV-CGLGFNFNVSLKNHKQK  581 (606)
Q Consensus       560 p~~C~-C~~~F~~~~~L~~H~~~  581 (606)
                      ||.|. ||+.+..+.+|..|..+
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            79998 99999999999999754

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.76  E-value=0.0075  Score=33.91  Aligned_cols=26  Identities=35%  Similarity=0.652  Sum_probs=18.5

Q ss_pred             cccccccchhccChhhHHHHHhhhcC
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHMRTHTN  557 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~~~H~~  557 (606)
                      .|.|..||++|+....+.+|....+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            46777777777777777777665554

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.74  E-value=0.011  Score=31.25  Aligned_cols=23  Identities=30%  Similarity=0.450  Sum_probs=13.9

Q ss_pred             ccccccccccCchHHHHhhhhhc
Q psy15165        370 YICEYCHKEFTFYNYLRRHMRVH  392 (606)
Q Consensus       370 ~~C~~C~k~f~~~~~L~~H~~~H  392 (606)
                      -+|+.|.++.+++..|+.|.++|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            35666666666666666666655

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.18  E-value=0.01  Score=30.99  Aligned_cols=24  Identities=42%  Similarity=0.812  Sum_probs=16.1

Q ss_pred             ccccc--cchhccChhhHHHHHhhhc
Q psy15165        533 FVCEY--CNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       533 y~C~~--C~k~f~~~~~L~~H~~~H~  556 (606)
                      |.|..  |+++|.....|+.|+.+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            44533  7777777777777777765

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.04  E-value=0.017  Score=29.52  Aligned_cols=24  Identities=25%  Similarity=0.545  Sum_probs=14.5

Q ss_pred             ccccccccccCCHHHHHHhHhhhc
Q psy15165        249 FKCRVCDWKLNSYDKLLRHIKSDH  272 (606)
Q Consensus       249 ~~C~~C~~~f~~~~~L~~H~~~~H  272 (606)
                      |.|+.|-+.|..+.++..|.+..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            556666666666666666665443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.03  E-value=0.0096  Score=34.10  Aligned_cols=20  Identities=40%  Similarity=0.469  Sum_probs=16.0

Q ss_pred             chhccChhhHHHHHhhhcCC
Q psy15165        539 NKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       539 ~k~f~~~~~L~~H~~~H~~~  558 (606)
                      ++.|.....|..|||+||||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            35588888888888888886

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.93  E-value=0.012  Score=33.03  Aligned_cols=26  Identities=23%  Similarity=0.666  Sum_probs=23.3

Q ss_pred             CCcccc-cCccCCchhhHHHhhhcccc
Q psy15165        559 KPYKCV-CGLGFNFNVSLKNHKQKCSV  584 (606)
Q Consensus       559 kp~~C~-C~~~F~~~~~L~~H~~~h~~  584 (606)
                      ..|.|. ||+.|.++..+.+|--.+.|
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcCC
Confidence            358998 99999999999999988875

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.86  E-value=0.024  Score=34.79  Aligned_cols=27  Identities=22%  Similarity=0.289  Sum_probs=24.2

Q ss_pred             CCcccCCCCCCccCCHHHHHHHHHHhc
Q psy15165        442 EVSNLCYICGFFSAKRSTLAHHIQDHI  468 (606)
Q Consensus       442 ~~~~~C~~C~~~f~~~~~L~~H~~~h~  468 (606)
                      ...|.|..||+.|.....|+.|...|-
T Consensus         4 ~~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           4 AGILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             cceeeccccccccCCHHHHhHhHHhcC
Confidence            346899999999999999999999884

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.84  E-value=0.023  Score=29.84  Aligned_cols=25  Identities=36%  Similarity=0.846  Sum_probs=21.0

Q ss_pred             ceecccCccccCCHHHHHHHHhccc
Q psy15165        337 YHVCPHCGKKFTRKAELQLHIKGIH  361 (606)
Q Consensus       337 ~~~C~~C~~~f~~~~~l~~H~~~~h  361 (606)
                      .|+|+.|+-....++.|+.|+++.|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            3789999999999999999988643

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.70  E-value=0.016  Score=35.61  Aligned_cols=25  Identities=32%  Similarity=0.570  Sum_probs=17.0

Q ss_pred             cccccccchhccChhhHHHHHhhhc
Q psy15165        532 TFVCEYCNKEFTFLQYLKRHMRTHT  556 (606)
Q Consensus       532 ~y~C~~C~k~f~~~~~L~~H~~~H~  556 (606)
                      .|.|..|||.|+....|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            3667777777777777777766653

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.02  E-value=0.026  Score=30.71  Aligned_cols=28  Identities=25%  Similarity=0.695  Sum_probs=23.0

Q ss_pred             ccccccc--cchhccChhhHHHHHhhhcCC
Q psy15165        531 QTFVCEY--CNKEFTFLQYLKRHMRTHTNE  558 (606)
Q Consensus       531 k~y~C~~--C~k~f~~~~~L~~H~~~H~~~  558 (606)
                      +.|.|.+  |+..|...-.|..|+-.|||+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4577865  888999999999999888885

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.48  E-value=0.048  Score=30.24  Aligned_cols=21  Identities=24%  Similarity=0.526  Sum_probs=17.9

Q ss_pred             ccCCCCCCcCCChHHHHHhhh
Q psy15165        501 LQCPHCPKTFPRKTELSNHIK  521 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~  521 (606)
                      |.|+-||-.|++.+.|..|+.
T Consensus         9 f~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHTT
T ss_pred             eeccccceeecChhHHHhhhh
Confidence            788888888888888888864

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.04  E-value=0.083  Score=29.27  Aligned_cols=25  Identities=28%  Similarity=0.471  Sum_probs=16.4

Q ss_pred             CCCcccccccccccCCHHHHHHhHh
Q psy15165        245 SPYEFKCRVCDWKLNSYDKLLRHIK  269 (606)
Q Consensus       245 ~~~~~~C~~C~~~f~~~~~L~~H~~  269 (606)
                      +|-.|.|.-||..|.+.+.|..|+.
T Consensus         5 kparf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           5 KPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SCCCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cccceeccccceeecChhHHHhhhh
Confidence            3445677777777777777766654

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.01  E-value=0.068  Score=27.78  Aligned_cols=23  Identities=35%  Similarity=0.668  Sum_probs=20.5

Q ss_pred             ccc--c-cCccCCchhhHHHhhhccc
Q psy15165        561 YKC--V-CGLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       561 ~~C--~-C~~~F~~~~~L~~H~~~h~  583 (606)
                      |.|  . |+++|..-..|+.|.-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            788  3 9999999999999998875

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.52  E-value=0.11  Score=27.43  Aligned_cols=18  Identities=33%  Similarity=0.678  Sum_probs=12.5

Q ss_pred             cchhccChhhHHHHHhhh
Q psy15165        538 CNKEFTFLQYLKRHMRTH  555 (606)
Q Consensus       538 C~k~f~~~~~L~~H~~~H  555 (606)
                      |++.|...+.++.|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            667777777777776665

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.10  E-value=0.14  Score=26.97  Aligned_cols=19  Identities=21%  Similarity=0.389  Sum_probs=17.9

Q ss_pred             cCccCCchhhHHHhhhccc
Q psy15165        565 CGLGFNFNVSLKNHKQKCS  583 (606)
Q Consensus       565 C~~~F~~~~~L~~H~~~h~  583 (606)
                      |.+.|...+.+++|+-+|.
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            9999999999999998885

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.36  E-value=0.25  Score=26.28  Aligned_cols=24  Identities=25%  Similarity=0.598  Sum_probs=14.1

Q ss_pred             ccCCCCCCcCCChHHHHHhhhccc
Q psy15165        501 LQCPHCPKTFPRKTELSNHIKGIH  524 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~~~H  524 (606)
                      |.|..||+...+...++.|+-..|
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             eechhHHHHHhhccCceEEEeecc
Confidence            556666666666666666654333

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.90  E-value=0.11  Score=34.83  Aligned_cols=33  Identities=27%  Similarity=0.740  Sum_probs=23.4

Q ss_pred             ccCCCCCCcCCChHHHHHhhhcccccCCCCccccccccch
Q psy15165        501 LQCPHCPKTFPRKTELSNHIKGIHMKHELRQTFVCEYCNK  540 (606)
Q Consensus       501 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~k~y~C~~C~k  540 (606)
                      |.|+.|++.|+...++.. +-      .....|.|.+|+-
T Consensus        15 y~Cp~C~~~ys~Lda~~L-~d------~~~~~F~C~~C~~   47 (62)
T d1vd4a_          15 FKCPVCSSTFTDLEANQL-FD------PMTGTFRCTFCHT   47 (62)
T ss_dssp             EECSSSCCEEEHHHHHHH-EE------TTTTEEBCSSSCC
T ss_pred             eECCCCCCCcchhhHHHh-cC------cCCCeEEecCCCC
Confidence            889999998888776655 22      2234588888874

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.08  E-value=0.59  Score=24.79  Aligned_cols=26  Identities=15%  Similarity=0.212  Sum_probs=22.0

Q ss_pred             cccCCCCCCccCCHHHHHHHHHHhcC
Q psy15165        444 SNLCYICGFFSAKRSTLAHHIQDHIQ  469 (606)
Q Consensus       444 ~~~C~~C~~~f~~~~~L~~H~~~h~~  469 (606)
                      .|.|..||+...+...+..|+..-+.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            47899999999999999999876543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.51  E-value=0.16  Score=34.65  Aligned_cols=20  Identities=30%  Similarity=0.477  Sum_probs=10.4

Q ss_pred             ccccccchhccChhhHHHHH
Q psy15165        533 FVCEYCNKEFTFLQYLKRHM  552 (606)
Q Consensus       533 y~C~~C~k~f~~~~~L~~H~  552 (606)
                      |-|..|++.|.+...|..|+
T Consensus        16 fYCv~C~K~F~se~~l~~H~   35 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHF   35 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHT
T ss_pred             EecccccCccCCHHHHHHHH
Confidence            45555555555555555554

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.46  E-value=0.34  Score=27.15  Aligned_cols=26  Identities=27%  Similarity=0.602  Sum_probs=17.2

Q ss_pred             CCccccccccchhccChhhHHHHHhh
Q psy15165        529 LRQTFVCEYCNKEFTFLQYLKRHMRT  554 (606)
Q Consensus       529 ~~k~y~C~~C~k~f~~~~~L~~H~~~  554 (606)
                      |+..|.|.+|.+.++.-+++-+|..+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            44557777777777777777777543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.98  E-value=0.33  Score=33.01  Aligned_cols=22  Identities=18%  Similarity=0.369  Sum_probs=20.7

Q ss_pred             CcccccCccccCCHHHHHhhhh
Q psy15165        214 EFKCRVCDWKLNSYDKLLRHMD  235 (606)
Q Consensus       214 ~~~C~~C~~~f~~~~~l~~H~~  235 (606)
                      .|.|..|++.|.+...|..|++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            6899999999999999999986

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=80.19  E-value=0.66  Score=28.11  Aligned_cols=22  Identities=27%  Similarity=0.531  Sum_probs=10.3

Q ss_pred             ccccccccchhccChhhHHHHH
Q psy15165        531 QTFVCEYCNKEFTFLQYLKRHM  552 (606)
Q Consensus       531 k~y~C~~C~k~f~~~~~L~~H~  552 (606)
                      .|-.|++|+....+..+|++|+
T Consensus        23 qpatcpic~avirqsrnlrrhl   44 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHL   44 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHH
Confidence            3444444444444444444444