Psyllid ID: psy15348

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
MGGGTSSRIRDMSYGATVYNRRPYALSCIEARAVATATPLAFAVCRSSKMHVECTSFRFIAGVKQRCAWLVSRWMTIWVCSSGISSSTWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKCHTRCTNDNYGRGFFQDKYQINGLGLYFDPHFGPFWPAFWRSFCTKYTRPLFQTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRGRNEAIIESLVNGALPKDNYGVEFGEESGERLSEEFGVRAESSEEFRENGEEE
cccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccEEEEccHHHccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccEEEEccccEEEccccccccccEEEEcccccccccEEEEEEEEcccccEEEEEEEccccccccccccEEEEcccccccccccEEEEEcccccccccccccccccccEEEEEcccHHHHHHccccc
ccccccccHHHHccccccccEcccccccccHHHHHHHHHHcccEEEEcccEEEEcHHHHHHHccccccccccccccccccccccHHHHHHHHHHcccEccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccHHHHHHHHHHcccEEEEEEcccccEEHHHHHHHcccEEEEcccccEEEEEEEEEEEEEEEccEEEEEEEccEcccccEccEEEEEccccHHHcccccEEccEccccccccccccccccccccEEEEcccHHHHcccccc
mgggtssrirdmsygatvynrrpyaLSCIEARAVATATPLAFAVCrsskmhvectSFRFIAGVKQRCAWLVSRWMTIWVCssgissstwAWVHKrglvtggahhsntgcqpvsfppcnhanyttsepecktlatpqpkchtrctndnygrgffqdkyqinglglyfdphfgpfwpaFWRSFCtkytrplfqtngrVYAVSASAEIVAYATVKIVgwgeengrpYWTIVSTfgeqfgdkgTIKILRGRNEAIIESLVngalpkdnygvefgeesgeRLSEEfgvraesseefrengeee
mgggtssrirdmsygatvyNRRPYALSCIEARAVATATPLAFAVCRSSKMHVECTSFRFIAGVKQRCAWLVSRWMTIWVCSSGISSSTWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKCHTRCTNDNYGRGFFQDKYQINGLGLYFDPHFGPFWPAFWRSFCTKYTRPLFQTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVStfgeqfgdkGTIKILRGRNEAIIESlvngalpkdnYGVEFGEESgerlseefgvraesseefrengeee
MGGGTSSRIRDMSYGATVYNRRPYALSCIEARAVATATPLAFAVCRSSKMHVECTSFRFIAGVKQRCAWLVSRWMTIWVCSSGISSSTWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKCHTRCTNDNYGRGFFQDKYQINGLGLYFDPHFGPFWPAFWRSFCTKYTRPLFQTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRGRNEAIIESLVNGALPKDNYGVEFGEESGERLSEEFGVRAesseefrengeee
************SYGATVYNRRPYALSCIEARAVATATPLAFAVCRSSKMHVECTSFRFIAGVKQRCAWLVSRWMTIWVCSSGISSSTWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTT****CKTLATPQPKCHTRCTNDNYGRGFFQDKYQINGLGLYFDPHFGPFWPAFWRSFCTKYTRPLFQTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRGRNEAIIESLVNGALPKDNYGV*******************************
******S*IRDMSYGATVYNRRPYALSCIEARAVATATPLAFAVCRSSKMHVECTSFRFIAGVKQRCAWLVSRWMTIWVCSSGISSSTWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKCHTRCTNDNYGRGFFQDKYQINGLGLYFDPHFGPFWPAFWRSFCTKYTRPLFQTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRGRNEAIIESLVNGALPKDNYGVEF*****************************
********IRDMSYGATVYNRRPYALSCIEARAVATATPLAFAVCRSSKMHVECTSFRFIAGVKQRCAWLVSRWMTIWVCSSGISSSTWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKCHTRCTNDNYGRGFFQDKYQINGLGLYFDPHFGPFWPAFWRSFCTKYTRPLFQTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRGRNEAIIESLVNGALPKDNYGVEFG****************************
*****SSRIRDMSYGATVYNRRPYALSCIEARAVATATPLAFAVCRSSKMHVECTSFRFIAGVKQRCAWLVSRWMTIWVCSSGISSSTWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKCHTRCTNDNYGRGFFQDKYQINGLGLYFDPHFGPFWPAFWRSFCTKYTRPLFQTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRGRNEAIIESLVNGALPKDNY***************F*****************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGGGTSSRIRDMSYGATVYNRRPYALSCIEARAVATATPLAFAVCRSSKMHVECTSFRFIAGVKQRCAWLVSRWMTIWVCSSGISSSTWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKCHTRCTNDNYGRGFFQDKYQINGLGLYFDPHFGPFWPAFWRSFCTKYTRPLFQTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRGRNEAIIESLVNGALPKDNYGVEFGEESGERLSEEFGVRAESSEEFRENGEEE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query298 2.2.26 [Sep-21-2011]
P43510379 Cathepsin B-like cysteine yes N/A 0.593 0.467 0.312 1e-21
P43509344 Cathepsin B-like cysteine no N/A 0.590 0.511 0.336 3e-20
P43508335 Cathepsin B-like cysteine no N/A 0.587 0.522 0.305 3e-20
P43157342 Cathepsin B-like cysteine N/A N/A 0.583 0.508 0.343 5e-19
Q5R6D1339 Cathepsin B OS=Pongo abel yes N/A 0.590 0.519 0.331 9e-18
P07858339 Cathepsin B OS=Homo sapie yes N/A 0.590 0.519 0.331 1e-17
Q4R5M2339 Cathepsin B OS=Macaca fas N/A N/A 0.590 0.519 0.331 1e-17
P00787339 Cathepsin B OS=Rattus nor yes N/A 0.580 0.510 0.322 7e-17
P10605339 Cathepsin B OS=Mus muscul yes N/A 0.567 0.498 0.310 9e-17
A1E295335 Cathepsin B OS=Sus scrofa yes N/A 0.577 0.513 0.335 9e-17
>sp|P43510|CPR6_CAEEL Cathepsin B-like cysteine proteinase 6 OS=Caenorhabditis elegans GN=cpr-6 PE=1 SV=1 Back     alignment and function desciption
 Score =  103 bits (258), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 18/195 (9%)

Query: 80  CSSGISSSTWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKC 139
           C+ G   + W +  K G+VTG  + +N GC+P  FPPC H +  T    C     P PKC
Sbjct: 174 CNGGDPLAAWRYWVKDGIVTGSNYTANNGCKPYPFPPCEHHSKKTHFDPCPHDLYPTPKC 233

Query: 140 HTRCTNDNYGRGFFQDKY----------QINGLGLYFDPHFGPFWPAFWRSFCTKYTRPL 189
             +C +D   + + +DK+           +  +      H GP   AF      +     
Sbjct: 234 EKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTH-GPLEIAF------EVYEDF 286

Query: 190 FQTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRGRNE 249
              +G VY V    ++     VK++GWG ++G PYWT+ +++   +G+ G  +ILRG +E
Sbjct: 287 LNYDGGVY-VHTGGKLGGGHAVKLIGWGIDDGIPYWTVANSWNTDWGEDGFFRILRGVDE 345

Query: 250 AIIESLVNGALPKDN 264
             IES V G +PK N
Sbjct: 346 CGIESGVVGGIPKLN 360

Caenorhabditis elegans (taxid: 6239)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|P43509|CPR5_CAEEL Cathepsin B-like cysteine proteinase 5 OS=Caenorhabditis elegans GN=cpr-5 PE=2 SV=1 Back     alignment and function description
>sp|P43508|CPR4_CAEEL Cathepsin B-like cysteine proteinase 4 OS=Caenorhabditis elegans GN=cpr-4 PE=2 SV=1 Back     alignment and function description
>sp|P43157|CYSP_SCHJA Cathepsin B-like cysteine proteinase OS=Schistosoma japonicum GN=CATB PE=2 SV=1 Back     alignment and function description
>sp|Q5R6D1|CATB_PONAB Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1 Back     alignment and function description
>sp|P07858|CATB_HUMAN Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3 Back     alignment and function description
>sp|Q4R5M2|CATB_MACFA Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1 Back     alignment and function description
>sp|P00787|CATB_RAT Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2 Back     alignment and function description
>sp|P10605|CATB_MOUSE Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2 Back     alignment and function description
>sp|A1E295|CATB_PIG Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
187105118302 cathepsin B-5880 precursor [Acyrthosipho 0.721 0.711 0.310 2e-22
242001640223 cathepsin B endopeptidase, putative [Ixo 0.580 0.775 0.364 4e-22
256086863271 cathepsin B-like peptidase (C01 family) 0.734 0.808 0.293 5e-21
308511959387 CRE-CPR-6 protein [Caenorhabditis remane 0.597 0.459 0.340 2e-20
55793943342 cathepsin B1 isotype 2 precursor [Tricho 0.580 0.505 0.356 3e-20
55793945342 cathepsin B1 isotype 3 precursor [Tricho 0.580 0.505 0.356 3e-20
55793941342 cathepsin B1 isotype 1 precursor [Tricho 0.580 0.505 0.356 3e-20
22535408347 cathepsin B-like protease [Nilaparvata l 0.577 0.495 0.338 3e-20
55793947342 cathepsin B1 isotype 4 precursor [Tricho 0.587 0.511 0.347 4e-20
55793951342 cathepsin B1 isotype 6 precursor [Tricho 0.587 0.511 0.357 4e-20
>gi|187105118|ref|NP_001119619.1| cathepsin B-5880 precursor [Acyrthosiphon pisum] gi|163300442|tpg|DAA06127.1| TPA_inf: cathepsin B transcript 5880 [Acyrthosiphon pisum] gi|239790051|dbj|BAH71611.1| ACYPI000015 [Acyrthosiphon pisum] gi|239790053|dbj|BAH71612.1| ACYPI000015 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 113/245 (46%), Gaps = 30/245 (12%)

Query: 27  SCIEARAVATATPLAFAVCRSSKMHVECTSFRFIAGVKQRCAWLVSRWMTIWVCSSGISS 86
           +C  + A++ A+ ++  +C  S   V+    +  A     C +L         CS G   
Sbjct: 77  NCKSSYAISVASAVSDRICIHSNGTVK---PKLSAQQILSCCYLCGDG-----CSGGQHF 128

Query: 87  STWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKCHTRCTND 146
            +W +  + GLV+GG + SN GCQP +  PC H   T  E  C       P+C  +C N 
Sbjct: 129 ESWDFYRRHGLVSGGEYGSNEGCQPYTIEPCQHTE-TAVENACSNKTLFTPECKVQCYNP 187

Query: 147 NYGRGFFQDKYQINGLGLYFD-PHF---------GPFWPAFWRSFCTKYTRPLFQTNGRV 196
           +YG  + +D +Q    G ++  P +         GP   +F+        +        V
Sbjct: 188 DYGTRYVKDNHQ----GTHYRVPAYTAMKEIYENGPITASFYM------YQDFVNYQSGV 237

Query: 197 YAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRGRNEAIIESLV 256
           YA + S + V    VKI+GWGEENG PYW   ++F   +GD G +KILRG NE  IE  +
Sbjct: 238 YAYN-SGKYVTTQAVKILGWGEENGTPYWLAANSFNTYWGDNGFVKILRGANECYIEEFM 296

Query: 257 NGALP 261
              LP
Sbjct: 297 YAGLP 301

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|242001640|ref|XP_002435463.1| cathepsin B endopeptidase, putative [Ixodes scapularis] gi|215498799|gb|EEC08293.1| cathepsin B endopeptidase, putative [Ixodes scapularis] Back     alignment and taxonomy information
>gi|256086863|ref|XP_002579605.1| cathepsin B-like peptidase (C01 family) [Schistosoma mansoni] gi|353228447|emb|CCD74618.1| cathepsin B-like peptidase (C01 family) [Schistosoma mansoni] Back     alignment and taxonomy information
>gi|308511959|ref|XP_003118162.1| CRE-CPR-6 protein [Caenorhabditis remanei] gi|308238808|gb|EFO82760.1| CRE-CPR-6 protein [Caenorhabditis remanei] Back     alignment and taxonomy information
>gi|55793943|gb|AAV65882.1| cathepsin B1 isotype 2 precursor [Trichobilharzia regenti] Back     alignment and taxonomy information
>gi|55793945|gb|AAV65883.1| cathepsin B1 isotype 3 precursor [Trichobilharzia regenti] Back     alignment and taxonomy information
>gi|55793941|gb|AAV65881.1| cathepsin B1 isotype 1 precursor [Trichobilharzia regenti] Back     alignment and taxonomy information
>gi|22535408|emb|CAC87118.1| cathepsin B-like protease [Nilaparvata lugens] Back     alignment and taxonomy information
>gi|55793947|gb|AAV65884.1| cathepsin B1 isotype 4 precursor [Trichobilharzia regenti] Back     alignment and taxonomy information
>gi|55793951|gb|AAV65886.1| cathepsin B1 isotype 6 precursor [Trichobilharzia regenti] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
WB|WBGene00000785344 cpr-5 [Caenorhabditis elegans 0.587 0.508 0.338 1.4e-23
WB|WBGene00000786379 cpr-6 [Caenorhabditis elegans 0.593 0.467 0.328 7.8e-23
WB|WBGene00000784335 cpr-4 [Caenorhabditis elegans 0.587 0.522 0.305 1e-22
UNIPROTKB|P07688335 CTSB "Cathepsin B" [Bos taurus 0.577 0.513 0.345 1.6e-22
WB|WBGene00010204351 F57F5.1 [Caenorhabditis elegan 0.587 0.498 0.338 2.1e-22
WB|WBGene00021070335 W07B8.1 [Caenorhabditis elegan 0.852 0.758 0.269 2.6e-22
ZFIN|ZDB-GENE-070323-1326 ctsbb "capthepsin B, b" [Danio 0.570 0.521 0.353 4.3e-22
UNIPROTKB|P07858339 CTSB "Cathepsin B" [Homo sapie 0.590 0.519 0.336 5.5e-22
UNIPROTKB|E2R6Q7339 CTSB "Uncharacterized protein" 0.590 0.519 0.341 7e-22
MGI|MGI:88561339 Ctsb "cathepsin B" [Mus muscul 0.604 0.530 0.335 9e-22
WB|WBGene00000785 cpr-5 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 65/192 (33%), Positives = 88/192 (45%)

Query:    80 CSSGISSSTWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKC 139
             C  G     W W  K GLVTGG++ +  GC+P S  PC         P C     P PKC
Sbjct:   154 CEGGYPIQAWKWWVKHGLVTGGSYETQFGCKPYSIAPCGETVNGVKWPACPEDTEPTPKC 213

Query:   140 HTRCTN-DNYGRGFFQDK------YQINGLGLYFDPHF---GPFWPAFWRSFCTKYTRPL 189
                CT+ +NY   + QDK      Y +              GP   AF     T Y    
Sbjct:   214 VDSCTSKNNYATPYLQDKHFGSTAYAVGKKVEQIQTEILTNGPIEVAF-----TVY-EDF 267

Query:   190 FQTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRGRNE 249
             +Q    VY  +A A +  +A VKI+GWG +NG PYW + +++   +G+KG  +I+RG NE
Sbjct:   268 YQYTTGVYVHTAGASLGGHA-VKILGWGVDNGTPYWLVANSWNVAWGEKGYFRIIRGLNE 326

Query:   250 AIIESLVNGALP 261
               IE      +P
Sbjct:   327 CGIEHSAVAGIP 338
GO:0006508 "proteolysis" evidence=IEA
GO:0008234 "cysteine-type peptidase activity" evidence=IEA
WB|WBGene00000786 cpr-6 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00000784 cpr-4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|P07688 CTSB "Cathepsin B" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
WB|WBGene00010204 F57F5.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00021070 W07B8.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070323-1 ctsbb "capthepsin B, b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P07858 CTSB "Cathepsin B" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2R6Q7 CTSB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:88561 Ctsb "cathepsin B" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 1e-24
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 3e-10
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 4e-10
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 5e-08
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 3e-06
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 8e-06
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 6e-05
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 7e-05
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 0.001
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information 
 Score = 98.9 bits (247), Expect = 1e-24
 Identities = 55/186 (29%), Positives = 75/186 (40%), Gaps = 30/186 (16%)

Query: 80  CSSGISSSTWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKC 139
           C+ G   + W ++   G+VTGG       CQP + PPC H                 PKC
Sbjct: 69  CNGGYPDAAWKYLTTTGVVTGG-------CQPYTIPPCGHHPEGPPPCCGTP--YCTPKC 119

Query: 140 HTRCTNDNYGRGFFQDKYQ---INGLGLYFDP------HFGPFWPAFWRSFCTKYTRPLF 190
              C        + +DK++      +              GP   AF     T Y     
Sbjct: 120 QDGCEKT-----YEEDKHKGKSAYSVPSDETDIMKEIMTNGPVQAAF-----TVY-EDFL 168

Query: 191 QTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRGRNEA 250
                VY    S + +    VKI+GWG ENG PYW   +++G  +G+ G  +ILRG NE 
Sbjct: 169 YYKSGVY-QHTSGKQLGGHAVKIIGWGVENGVPYWLAANSWGTDWGENGYFRILRGSNEC 227

Query: 251 IIESLV 256
            IES V
Sbjct: 228 GIESEV 233

Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an exopeptidase through its carboxydipeptidyl activity. Together with other cathepsins, it is involved in the degradation of proteins, proenzyme activation, Ag processing, metabolism and apoptosis. Cathepsin B has been implicated in a number of human diseases such as cancer, rheumatoid arthritis, osteoporosis and Alzheimer's disease. The unique carboxydipeptidyl activity of cathepsin B is attributed to the presence of an occluding loop in its active site which favors the binding of the C-termini of substrate proteins. Some members of this group do not possess the occluding loop. TIN-Ag is an extracellular matrix basement protein which was originally identified as a target Ag involved in anti-tubular basement membrane antibody-mediated interstitial nephritis. It plays a role in renal tubulogenesis and is defective in hereditary tubulointerstitial disorders. TIN-Ag is exclusively expressed in kidney tissues. . Length = 236
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 298
KOG1542|consensus372 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
KOG1543|consensus325 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
KOG1544|consensus470 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.9
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.83
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.4
COG3579444 PepC Aminopeptidase C [Amino acid transport and me 98.16
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 94.36
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 92.7
KOG4128|consensus457 82.89
>KOG1542|consensus Back     alignment and domain information 
Probab=100.00  E-value=5.3e-55  Score=392.13  Aligned_cols=206  Identities=20%  Similarity=0.267  Sum_probs=173.5

Q ss_pred             ccccCCcCCcccccCCCCCCCCCccHHHHHHHHHHHHHHHHHcCCcccccccccCHHHHhhccCcccccCCCCCCCCCcH
Q psy15348          6 SSRIRDMSYGATVYNRRPYALSCIEARAVATATPLAFAVCRSSKMHVECTSFRFIAGVKQRCAWLVSRWMTIWVCSSGIS   85 (298)
Q Consensus         6 ~~~~~~~~~~~~~~~~v~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~~~~~~LS~q~l~~c~~~~~~~~~~~gC~GG~~   85 (298)
                      +=+|||+    -.++||||||+||||||||+++++|.+++|++++     .+.||+|+|+||..      ++.||+||.+
T Consensus       160 ~fDWR~k----gaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~-----LvsLSEQeLvDCD~------~d~gC~GGl~  224 (372)
T KOG1542|consen  160 SFDWRDK----GAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGK-----LVSLSEQELVDCDS------CDNGCNGGLM  224 (372)
T ss_pred             ccchhcc----CCccccccCCcCcchhhhhhhhhhhhHHHhhcCc-----ccccchhhhhcccC------cCCcCCCCCh
Confidence            3456665    4788999999999999999999999999999998     89999999999996      4899999999


Q ss_pred             HHHHHHHHH-cCcCCCCCCCCCCCCcCCCCCCCCCCCCCCCCC-CCCCCCCCCCccceeeccCCccceeecccccccccc
Q psy15348         86 SSTWAWVHK-RGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEP-ECKTLATPQPKCHTRCTNDNYGRGFFQDKYQINGLG  163 (298)
Q Consensus        86 ~~a~~~~~~-~Gl~~e~~y~~~~~c~PY~~~~~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  163 (298)
                      ..||+|+++ .||..|.+|       ||+          ++.+ .|....   ......+ .+...+.      ..+++|
T Consensus       225 ~nA~~~~~~~gGL~~E~dY-------PY~----------g~~~~~C~~~~---~~~~v~I-~~f~~l~------~nE~~i  277 (372)
T KOG1542|consen  225 DNAFKYIKKAGGLEKEKDY-------PYT----------GKKGNQCHFDK---SKIVVSI-KDFSMLS------NNEDQI  277 (372)
T ss_pred             hHHHHHHHHhCCccccccC-------Ccc----------ccCCCccccch---hhceEEE-eccEecC------CCHHHH
Confidence            999999555 589999999       999          4555 898771   2233333 2222222      122267


Q ss_pred             ccccccCCceeEEEeccccccCCCCccCCCCceEEe--cCCcccccCeEEEEEeeeccC-CeeEEEEEcCCCCCcCCCce
Q psy15348        164 LYFDPHFGPFWPAFWRSFCTKYTRPLFQTNGRVYAV--SASAEIVAYATVKIVGWGEEN-GRPYWTIVSTFGEQFGDKGT  240 (298)
Q Consensus       164 ~~~l~~~GPV~v~i~~~~~~v~~~f~~y~~G~Iy~~--~~~~~~~~~HaV~IVGyg~~~-g~~yWivkNSWG~~WGe~Gy  240 (298)
                      ...|..+|||+|+|     ++ ..++.|++| |..+  ..|.+..++|+|+|||||.+. .++|||||||||+.|||+||
T Consensus       278 a~wLv~~GPi~vgi-----Na-~~mQ~YrgG-V~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY  350 (372)
T KOG1542|consen  278 AAWLVTFGPLSVGI-----NA-KPMQFYRGG-VSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGY  350 (372)
T ss_pred             HHHHHhcCCeEEEE-----ch-HHHHHhccc-ccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccce
Confidence            77888999999999     85 578999999 9988  568877899999999999998 89999999999999999999


Q ss_pred             EEEEecCCcccccceeeeee
Q psy15348        241 IKILRGRNEAIIESLVNGAL  260 (298)
Q Consensus       241 ~~i~rg~n~cgie~~~~~~~  260 (298)
                      |||.||.|.|||++++..+.
T Consensus       351 ~~l~RG~N~CGi~~mvss~~  370 (372)
T KOG1542|consen  351 YKLCRGSNACGIADMVSSAA  370 (372)
T ss_pred             EEEeccccccccccchhhhh
Confidence            99999999999999988765

>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>KOG1543|consensus Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>KOG1544|consensus Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>KOG4128|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 6e-19
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 7e-19
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 7e-19
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 8e-19
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 9e-19
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 3e-18
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 5e-18
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 6e-18
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 6e-18
1mir_A322 Rat Procathepsin B Length = 322 8e-18
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 1e-17
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 1e-17
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 9e-17
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 6e-12
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 7e-12
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 9e-12
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 2e-04
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 2e-04
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 6e-04
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 6e-04
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure 
Iteration: 1

 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 95/196 (48%), Gaps = 20/196 (10%)
Query: 80  CSSGISSSTWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKC 139
           C+ G  +  W +  ++GLV+GG + S+ GC+P S PPC H +   S P C T     PKC
Sbjct: 72  CNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEH-HVNGSRPPC-TGEGDTPKC 129
Query: 140 HTRCTNDNYGRGFFQDK-YQINGLGLYFDPHF--------GPFWPAFWRSFCTKYTRPLF 190
              C    Y   + QDK Y  N   +              GP   AF     + Y+  L 
Sbjct: 130 SKIC-EPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAF-----SVYSDFLL 183
Query: 191 QTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRGRNEA 250
             +G    V+   E++    ++I+GWG ENG PYW + +++   +GD G  KILRG++  
Sbjct: 184 YKSGVYQHVTG--EMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHC 241
Query: 251 IIESLVNGALPK-DNY 265
            IES V   +P+ D Y
Sbjct: 242 GIESEVVAGIPRTDQY 257
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 2e-30
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 2e-30
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 6e-29
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 3e-24
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 1e-13
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 4e-12
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 2e-06
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 2e-06
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 2e-06
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 3e-06
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 3e-06
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 4e-06
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 4e-06
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 4e-06
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 4e-06
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 4e-06
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 5e-06
1cqd_A221 Protein (protease II); cysteine protease, glycopro 5e-06
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 6e-06
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 6e-06
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 6e-06
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 8e-06
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 1e-05
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-05
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 5e-05
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 8e-05
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 1e-04
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 5e-04
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
 Score =  115 bits (290), Expect = 2e-30
 Identities = 64/198 (32%), Positives = 93/198 (46%), Gaps = 27/198 (13%)

Query: 80  CSSGISSSTWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKC 139
           C+ G  +  W +  ++GLV+GG + S+ GC+P S PPC H +   S P C T     PKC
Sbjct: 134 CNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEH-HVNGSRPPC-TGEGDTPKC 191

Query: 140 HTRCTNDNYGRGFFQDKYQINGLGLYFDP-----------HFGPFWPAF--WRSFCTKYT 186
              C    Y   + QDK+   G   Y                GP   AF  +  F     
Sbjct: 192 SKIC-EPGYSPTYKQDKHY--GYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDF----- 243

Query: 187 RPLFQTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRG 246
             L   +G VY       +  +A ++I+GWG ENG PYW + +++   +GD G  KILRG
Sbjct: 244 --LLYKSG-VYQHVTGEMMGGHA-IRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRG 299

Query: 247 RNEAIIESLVNGALPKDN 264
           ++   IES V   +P+ +
Sbjct: 300 QDHCGIESEVVAGIPRTD 317
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A Length = 220 Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A* Length = 222 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 99.98
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 97.01
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 96.28
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 95.73
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
Probab=100.00  E-value=1.7e-62  Score=453.09  Aligned_cols=229  Identities=31%  Similarity=0.563  Sum_probs=197.5

Q ss_pred             ccCCCCCCCCCccHHHHHHHHHHHHHHHHHcCCcccccccccCHHHHhhccCcccccCCCCCCCCCcHHHHHHHHHHcCc
Q psy15348         18 VYNRRPYALSCIEARAVATATPLAFAVCRSSKMHVECTSFRFIAGVKQRCAWLVSRWMTIWVCSSGISSSTWAWVHKRGL   97 (298)
Q Consensus        18 ~~~~v~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~~~~~~LS~q~l~~c~~~~~~~~~~~gC~GG~~~~a~~~~~~~Gl   97 (298)
                      .++||||||.||||||||++++||++++|+++++.   .+.||+|+|+||+...    ++.||+||++..||+|++++||
T Consensus        79 ~vtpVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~---~~~LSeq~LvdC~~~~----~~~GC~GG~~~~A~~yi~~~Gi  151 (317)
T 3pbh_A           79 TIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHV---SVEVSAEDLLTCCGSM----CGDGCNGGYPAEAWNFWTRKGL  151 (317)
T ss_dssp             GGTCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSC---CCCBCHHHHHHHSCTT----TBCGGGCBCHHHHHHHHHHTCE
T ss_pred             CcCCccccCCccchHHHHHHHHHHHHHHHHhCCCC---cccCCHHHHHHhcccc----CCCCCCCCCHHHHHHHHHHhCC
Confidence            48899999999999999999999999999988654   6899999999998721    4689999999999999999999


Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeccCCccceeeccc---------cccccccccccc
Q psy15348         98 VTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKCHTRCTNDNYGRGFFQDK---------YQINGLGLYFDP  168 (298)
Q Consensus        98 ~~e~~y~~~~~c~PY~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~e~~~~~l~  168 (298)
                      ++|++|.+.++|+||..++|.|+.. +..+.|+.. ...+.|...| ...+.+.+..+.         ....+++|.+|+
T Consensus       152 ~te~~Y~~~~~c~PY~~~~c~~~~~-~~~~~C~~~-~~~~~c~~~c-~~~~~~~~~~~~~~~~~~~~v~~~e~~i~~~i~  228 (317)
T 3pbh_A          152 VSGGLYESHVGCRPYSIPPCEHHVN-GSRPPCTGE-GDTPKCSKIC-EPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIY  228 (317)
T ss_dssp             EBBCSTTCCCBSSCCCSCCCCCCCT-TCCSCCCSC-CCCCCCCCSC-CSSCCSCGGGSEECBCCCEEECSCHHHHHHHHH
T ss_pred             CcchhccCCCCCcCcccCccccccc-CcCCCCCCc-CCCCcccccc-cCCCccceeeeeeeeeecccCCcHHHHHHHHHH
Confidence            9999999999999999999988865 567889765 4456666666 444544332221         112236888999


Q ss_pred             cCCceeEEEeccccccCCCCccCCCCceEEecCCcccccCeEEEEEeeeccCCeeEEEEEcCCCCCcCCCceEEEEecCC
Q psy15348        169 HFGPFWPAFWRSFCTKYTRPLFQTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRGRN  248 (298)
Q Consensus       169 ~~GPV~v~i~~~~~~v~~~f~~y~~G~Iy~~~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~n  248 (298)
                      .+|||+|+|     +++++|++|++| ||..+. +...++|||+|||||+++|++|||||||||++|||+|||||+|+.|
T Consensus       229 ~~GPV~v~i-----~~~~~f~~Y~~G-Vy~~~~-~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~ri~rg~n  301 (317)
T 3pbh_A          229 KNGPVEGAF-----SVYSDFLLYKSG-VYQHVT-GEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQD  301 (317)
T ss_dssp             HHCCEEEEE-----EEEGGGGGEEEE-EECCCS-CCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSC
T ss_pred             HCCCEEEEE-----EecccccCCCCc-EEccCC-CCCCCCEEEEEEEEEEeCCeeEEEEEcCCCCCcCCCcEEEEEcCCC
Confidence            999999999     998999999999 998874 6667899999999999999999999999999999999999999999


Q ss_pred             cccccceeeeeeccc
Q psy15348        249 EAIIESLVNGALPKD  263 (298)
Q Consensus       249 ~cgie~~~~~~~p~~  263 (298)
                      +||||+.+++++|++
T Consensus       302 ~CgI~~~~~a~~p~~  316 (317)
T 3pbh_A          302 HCGIESEVVAGIPRT  316 (317)
T ss_dssp             GGGTTTSCEECCBCC
T ss_pred             cccCCCceEeeecCC
Confidence            999999999999975
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 298
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 5e-20
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 3e-12
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 3e-11
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 2e-09
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 5e-09
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 2e-08
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 4e-08
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 1e-07
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 2e-07
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 4e-07
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 1e-06
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 1e-06
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 1e-06
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 1e-06
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 2e-06
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 6e-06
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 6e-04
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 0.001
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 0.003
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.0 bits (209), Expect = 5e-20
 Identities = 64/239 (26%), Positives = 96/239 (40%), Gaps = 26/239 (10%)

Query: 33  AVATATPLAFAVCRSSKMHVECTSFRFIAGVKQRCAWLVSRWMTIWVCSSGISSSTWAWV 92
           A      ++  +C  +  HV          V           M    C+ G  +  W + 
Sbjct: 32  AFGAVEAISDRICIHTNAHVSVE-------VSAEDLLTCCGSMCGDGCNGGYPAEAWNFW 84

Query: 93  HKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKCHTRCTNDNYGRGF 152
            ++GLV+GG + S+ GC+P S PPC H +   S P C T     PKC   C    Y   +
Sbjct: 85  TRKGLVSGGLYESHVGCRPYSIPPCEH-HVNGSRPPC-TGEGDTPKCSKIC-EPGYSPTY 141

Query: 153 FQDKYQINGLGLYFDP---------HFGPFWPAFWRSFCTKYTRPLFQTNGRVYAVSASA 203
            QDK+         +            GP   AF            F           + 
Sbjct: 142 KQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAF-------SVYSDFLLYKSGVYQHVTG 194

Query: 204 EIVAYATVKIVGWGEENGRPYWTIVSTFGEQFGDKGTIKILRGRNEAIIESLVNGALPK 262
           E++    ++I+GWG ENG PYW + +++   +GD G  KILRG++   IES V   +P+
Sbjct: 195 EMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPR 253
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d3gcba_458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.56
d2cb5a_453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.44
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 93.51
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 90.99
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-53  Score=378.35  Aligned_cols=239  Identities=29%  Similarity=0.532  Sum_probs=182.1

Q ss_pred             ccccCC-cCCcccccCCCCCCCCCccHHHHHHHHHHHHHHHHHcCCcccccccccCHHHHhhccCcccccCCCCCCCCCc
Q psy15348          6 SSRIRD-MSYGATVYNRRPYALSCIEARAVATATPLAFAVCRSSKMHVECTSFRFIAGVKQRCAWLVSRWMTIWVCSSGI   84 (298)
Q Consensus         6 ~~~~~~-~~~~~~~~~~v~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~~~~~~LS~q~l~~c~~~~~~~~~~~gC~GG~   84 (298)
                      |.+||. ++- ..+|+||||||.||||||||++++||++++++.+...   ...||+|+|++|....    .+.+|.||+
T Consensus         5 ~~D~R~~w~~-~~~vtpV~dQg~cGsCwAfA~~~~lEs~~~i~~~~~~---~~~lS~~~l~~~~~~~----~~~gc~gg~   76 (254)
T d1gmya_           5 SFDAREQWPQ-CPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHV---SVEVSAEDLLTCCGSM----CGDGCNGGY   76 (254)
T ss_dssp             SEEHHHHSTT-CGGGGCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSS---CCCBCHHHHHHHSGGG----GBCGGGCBC
T ss_pred             CCcchhhcCC-CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHCCCC---ccccchHHHHhhcccc----CCCCCCCCc
Confidence            455555 342 3478999999999999999999999999999988765   6889999999998653    468999999


Q ss_pred             HHHHHHHHHHcCcCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCccceeeccCCccceeec---------c
Q psy15348         85 SSSTWAWVHKRGLVTGGAHHSNTGCQPVSFPPCNHANYTTSEPECKTLATPQPKCHTRCTNDNYGRGFFQ---------D  155 (298)
Q Consensus        85 ~~~a~~~~~~~Gl~~e~~y~~~~~c~PY~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~---------~  155 (298)
                      +..|++++.++|+++|..|.....|.++..+.+..... +....|... ...+.....+ .......+..         .
T Consensus        77 ~~~a~~~~~~~G~~~e~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  153 (254)
T d1gmya_          77 PAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVN-GSRPPCTGE-GDTPKCSKIC-EPGYSPTYKQDKHYGYNSYS  153 (254)
T ss_dssp             HHHHHHHHHHTCBCBCCSTTCCCSSSCCCSCCCBSSSC-CSSCBCCSC-CCCCCCCCSC-CTTCCSCHHHHCBCBSCCEE
T ss_pred             HHHHHHHHHHcCcccccccccccccccccccccccccc-CccCccccc-cCCccccccc-cCCcccceeeeeeeeeeeec
Confidence            99999999999999999986666666666544433322 333334332 1111111111 0001000000         0


Q ss_pred             ccccccccccccccCCceeEEEeccccccCCCCccCCCCceEEecCCcccccCeEEEEEeeeccCCeeEEEEEcCCCCCc
Q psy15348        156 KYQINGLGLYFDPHFGPFWPAFWRSFCTKYTRPLFQTNGRVYAVSASAEIVAYATVKIVGWGEENGRPYWTIVSTFGEQF  235 (298)
Q Consensus       156 ~~~~~e~~~~~l~~~GPV~v~i~~~~~~v~~~f~~y~~G~Iy~~~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~W  235 (298)
                      .....+.+|.+|+.+|||++++     .+.++|+.|++| |+..+. ....++|||+|||||++++.+|||||||||++|
T Consensus       154 ~~~~~~~ik~~l~~~gpv~~~~-----~~~~~f~~y~~g-i~~~~~-~~~~~~Hav~IVGyg~~~g~~ywIvkNSWG~~W  226 (254)
T d1gmya_         154 VSNSEKDIMAEIYKNGPVEGAF-----SVYSDFLLYKSG-VYQHVT-GEMMGGHAIRILGWGVENGTPYWLVANSWNTDW  226 (254)
T ss_dssp             CCSCHHHHHHHHHHHCCEEEEE-----EEEGGGTTCCSS-EECCCS-CCEEEEEEEEEEEEEEETTEEEEEEECSBCTTS
T ss_pred             cccHHHHHHHHHHHcCCEEEEE-----EeechhhhccCC-cccccc-ccccccEEEEEEEEeccCCceEEEEEcCCCCCc
Confidence            0011124788899999999999     998999999999 997765 667789999999999999999999999999999


Q ss_pred             CCCceEEEEecCCcccccceeeeeecc
Q psy15348        236 GDKGTIKILRGRNEAIIESLVNGALPK  262 (298)
Q Consensus       236 Ge~Gy~~i~rg~n~cgie~~~~~~~p~  262 (298)
                      |++|||||+|+.|.||||+++++++|+
T Consensus       227 Gd~GYf~i~~~~n~cgi~~~~~~~~p~  253 (254)
T d1gmya_         227 GDNGFFKILRGQDHCGIESEVVAGIPR  253 (254)
T ss_dssp             TBTTEEEEECSSCGGGTTTSCEECCBC
T ss_pred             CCCceEEEEcCCCccCcCCceEeccCC
Confidence            999999999999999999999999986
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure