Psyllid ID: psy15995

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680---
Protein Sequence
YIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIAPF
Secondary Structure (PSIPRED)
ccEEEEEccccccEEEEEEccccEEEEEcccccEEEEcccccccccEEEEEEcccccEEEEEEccEEEEEEccccccccccccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEEcccccccccccccccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEEccccccEEEEEEccccEEEEEcccccEEcccccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEcccccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEEccccccEEEEEEEEcccEEEEEEccccEEEEEcccccccEEEEEEccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEccccccccEEEEEEcccEEEEEEccccEEEEEcccccEEccEEEcccccEEEEEcccEEEEEEcccEEEEccccEEEEccccccEEEEEEcccccEEEEEEccccEEEEEcccccccccccccccccEEEEEEcccccEEEEEcccccEEEEEccccEEEEccccccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEcccccccEEEEEEEccccEEEEEEccccEEEEEcccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEcccccEEEEEccccEEEEEEcccccEEEccccccccccccccEEcccccEEEEEEccEEEEEEcccccccEEEccccccEEEEEEcccccEEEEEEcccEEEEEEcccccccEEEEEEcccccEEEEccccccccEEEEEEcccccEEEEEEcccEEEEEEcccccccEEEEEEcccccEEEEEEcccccEEEEEEccccccEEEEEcccccEcEccccccccEEEEEEccccccEEEEEEccccEEEEEcccEEEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEcccccccccEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEEccccHHHcEEEEEEEccEEEEEEccccEEEEEcccccEEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEcccccccccEEEEEEcccEEEEEccccEEEEEEcccccEEEEEcccccEEEEEEEccccEEEEccccEEEEEcccEEEEEEccccEEEEEEcccccEEEEEEcccEEEEEEEEccEEEEEEEEEccccEEEEEEcccccEEEEEEccccEEEEEHcccEEccccccccccccEEEEEEcccccEEEEEEccccEEEEEccccccccEEcccccccEEEEEEcccccEEEEEccccEEEEEEcccc
Coil and Loop (DISEMBL)
yifatlprtqrgqpivlggdpkgknflytngnkyifatlprtqrgqpivlggdpkgknflytngnsviirnienpaisdiytehscavnvakyspsgfyiasgdisgkvriwdtvnkehilknefhpiggpikdiGTLLSLTSIRNILVLSIGFYIasgdisgkvriwdtvnkehilknefhpiggpikdiawspdnqrmVVVGEgrerfghvfmsetgtsvgeisgqskpinscdfkpsrpfriitgsedntiavfegppfkfkmtkqEHSRFVQavryspsgshfasagfdgkvflydgaSADLvselgnpahkggvyavawkpdgtqlltasgdktcklwDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISyldvnnpstpirvikghnkpitalalspdrgtvftgshdgfitrwnaktgendrvqgaghgnqingmKATGELLYtcgiddtikqvdlssnaysgpevklgsqprgldidentLVTVTVKQISIvengakvsslpidyepssisldhehglvavggadsKVHIYElnnkslspkaeldhlgpvtdcsfspsneylvasdahRKVVLyrvpdfelahnkewgfhsakvncvawspdsalvasgsldTTIIIWSLaspakhiiiknahpqsqitRLQWLDNDLLVSVGqdcntkiweiapf
Flexible Loop (DISEMBL)
yifatlprtqrgqpivlggdpkgkNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILknefhpiggpIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHIlknefhpiggpIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGtsvgeisgqskpinscdfkpSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLltasgdktckLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLssnaysgpevklgsqprgldideNTLVTVTVKqisivengakvsslPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIAPF
Low Complexity Region (SEG)
YIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIAPF
Disordered region (IsUnstruct)
**************IVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMS*************************PFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE***VQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLS****************GLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNN********LDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI***
Disordered Region (DISOPRED)
YIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIAPF
Disordered Region (DISEMBL)
YIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIAPF
Disordered Region (DISPRO)
YIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIAPF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
YIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIAPF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	683	2.2.26 [Sep-21-2011]
Q9VU68	608	Actin-interacting protein	yes	N/A	0.868	0.975	0.645	0.0
Q6PAX7	607	WD repeat-containing prot	N/A	N/A	0.865	0.973	0.458	1e-161
Q6DIF4	607	WD repeat-containing prot	yes	N/A	0.865	0.973	0.457	1e-158
Q9W7F2	607	WD repeat-containing prot	N/A	N/A	0.865	0.973	0.442	1e-151
O93277	609	WD repeat-containing prot	yes	N/A	0.862	0.967	0.422	1e-148
Q2KJH4	606	WD repeat-containing prot	yes	N/A	0.865	0.975	0.431	1e-146
Q5RKI0	606	WD repeat-containing prot	yes	N/A	0.863	0.973	0.433	1e-146
O88342	606	WD repeat-containing prot	yes	N/A	0.865	0.975	0.432	1e-146
O75083	606	WD repeat-containing prot	yes	N/A	0.863	0.973	0.426	1e-144
Q11176	611	Actin-interacting protein	yes	N/A	0.863	0.965	0.415	1e-140

>sp|Q9VU68|WDR1_DROME Actin-interacting protein 1 OS=Drosophila melanogaster GN=flr PE=2 SV=1

 Score =  857 bits (2214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/651 (64%), Positives = 497/651 (76%), Gaps = 58/651 (8%)

Query: 32  NKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVA 91
           NK I+ATLPRTQRGQPIVLG DPKGKNFLYTNGNSVIIRNIENPAI+D+YTEHSCAVNVA
Sbjct: 11  NKNIYATLPRTQRGQPIVLGADPKGKNFLYTNGNSVIIRNIENPAIADVYTEHSCAVNVA 70

Query: 92  KYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS 151
           KYSPSGFYIASGD SGK+RIWDTVNKEH+LKNEF PI GPIKDI       S  N  +++
Sbjct: 71  KYSPSGFYIASGDASGKIRIWDTVNKEHLLKNEFQPIAGPIKDIS-----WSPDNQRIVA 125

Query: 152 IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFG 211
           +G         G+ R        H+  +E                               
Sbjct: 126 VG--------EGRERF------GHVFMSE------------------------------- 140

Query: 212 HVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH 271
                 TGTSVGEISGQSK INS DF+P+RPFRI+TGSEDNTIAVFEGPPFKFKMTKQ+H
Sbjct: 141 ------TGTSVGEISGQSKSINSADFRPARPFRIVTGSEDNTIAVFEGPPFKFKMTKQDH 194

Query: 272 SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQL 331
           SRFVQAVRYSP G  FASAGFDGKVFLYDG S++LV E G+PAHKGGVYA+AWKPD TQL
Sbjct: 195 SRFVQAVRYSPDGKFFASAGFDGKVFLYDGTSSELVGEFGSPAHKGGVYALAWKPDSTQL 254

Query: 332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
           LT SGDKTC+LW +E++ +VSEF+MG  V+DQQVSCLWQGD L+TVSLSG I+YL+V +P
Sbjct: 255 LTCSGDKTCRLWTVESRELVSEFVMGTTVDDQQVSCLWQGDNLITVSLSGVITYLNVADP 314

Query: 392 STPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGM 451
           S P+RV+KGHNKPIT L LS DR T++TGSHDG +T WN+ +G NDR+ G GHGNQING+
Sbjct: 315 SKPLRVVKGHNKPITVLGLSDDRSTIYTGSHDGVVTNWNSGSGTNDRITGTGHGNQINGI 374

Query: 452 KATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDI--DENTLVTVTVKQISIV 509
            A G+ +YTCGIDD+++Q  +  N+Y+   VKL  QPRGL I  +EN +    +K++++V
Sbjct: 375 AAWGDFVYTCGIDDSLRQFSVEGNSYTDYVVKLNCQPRGLAILRNENIIALACIKELTLV 434

Query: 510 ENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTD 569
           ++  K+ SLPI YE SSI+++ +   VAVGG D K+HIY L    L PK ELDHLG VTD
Sbjct: 435 QDQKKIFSLPIKYEASSIAVNADTSDVAVGGDDQKLHIYTLKGGVLEPKVELDHLGAVTD 494

Query: 570 CSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLD 629
            S+SP  +YLVA DAHRKVVLY V +++ AHNKEWGFHSA+VN VAWSP+S LVASGSLD
Sbjct: 495 VSYSPDLKYLVACDAHRKVVLYSVEEYKPAHNKEWGFHSARVNTVAWSPNSLLVASGSLD 554

Query: 630 TTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           TTIIIWS+A+PAKH IIKNAHPQSQITRL WLDN+ ++S GQDCNTK+W +
Sbjct: 555 TTIIIWSVANPAKHTIIKNAHPQSQITRLVWLDNNTVISTGQDCNTKVWHV 605

Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins. Essential for organismal and cell viability. Required for the development of normal wing cell planar polarity.
Drosophila melanogaster (taxid: 7227)

>sp|Q6PAX7|WDR1B_XENLA WD repeat-containing protein 1-B OS=Xenopus laevis GN=wdr1-b PE=2 SV=1

 Score =  567 bits (1462), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 301/656 (45%), Positives = 403/656 (61%), Gaps = 65/656 (9%)

Query: 33  KYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAK 92
           K +FA+LP+ +RG   ++ GDPKG NFLYTNG SVIIRNI+NPAI+DIYTEH+  V VA+
Sbjct: 6   KKVFASLPQVERGVAKIIAGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTEHAHQVVVAR 65

Query: 93  YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI 152
           Y+PSGFYIASGD SGK+RIWDT  KEH+LK E+ P  G IKDI         + I V+  
Sbjct: 66  YAPSGFYIASGDTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAW---TEDSKRIAVVGE 122

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G      +  G V +WDT                                          
Sbjct: 123 G-----REKFGSVFLWDT------------------------------------------ 135

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
                 G+SVGEI G  K INS D K +RP+R++TGS+DN  A FEGPPFKFK T  +HS
Sbjct: 136 ------GSSVGEIIGNIKVINSVDIKQTRPYRLVTGSDDNCCAFFEGPPFKFKFTMSDHS 189

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL-GNPAHKGGVYAVAWKPDGTQL 331
           RFV  VR+SP GS  ASAG DG++FLYDG + + V  L G+ AH GG+YAV+W PDGTQL
Sbjct: 190 RFVNCVRFSPDGSRLASAGADGQIFLYDGKTGEKVCSLGGSKAHDGGIYAVSWSPDGTQL 249

Query: 332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
           L+ASGDKT K+WD+   S V+ F +G+ V DQQ+ CLWQ DYLL+VSLSG+I+YLD NNP
Sbjct: 250 LSASGDKTAKIWDVAANSAVTTFNLGSDVLDQQLGCLWQKDYLLSVSLSGYINYLDKNNP 309

Query: 392 STPIRVIKGHNKPITALAL--SPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN 449
           + P R+IKGHNK I  + +  S  R T++TGSHDG I  W+A+TGEN+   G GH NQ++
Sbjct: 310 AKPFRIIKGHNKSIQCMTVDKSDGRSTIYTGSHDGHINYWDAETGENNTFTGKGHTNQVS 369

Query: 450 GMKATG-ELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDE-NTLVTVTVKQI 506
            M   G   L TC +DDT++  +L S  YS  E VK+  QP+ + +     +VTV + QI
Sbjct: 370 SMDLDGSSQLITCSMDDTLRYTNLISKDYSSSESVKMDVQPKCVAVGSGGYVVTVCIGQI 429

Query: 507 SIVENGAKVSSL-PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE-LDHL 564
            ++++  KV ++  +DYEP ++++    G V+VGGAD KVH+Y +   SL  + + L   
Sbjct: 430 VLLKDKKKVFAIDSLDYEPEAVAIHKGSGTVSVGGADGKVHLYSIQGNSLKDEGKTLPAK 489

Query: 565 GPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVA 624
           G VTD ++SP   +L  +DA++ V ++ V D    HN  +G H AK   VAWSPD+   A
Sbjct: 490 GAVTDLAYSPDGAFLAVTDANKVVTVFSVADGYSEHNSYYGHH-AKALSVAWSPDNEHFA 548

Query: 625 SGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           S  +D  + +W+L+ P   I + +AH    ++ L WLD + L +V  D   K W +
Sbjct: 549 SSGMDMMVYVWTLSDPDTRIKMPDAHRLHHVSSLAWLDENTLATVSHDACVKQWTV 604

Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins. Doesn't sever actin filaments alone, but caps the barbed ends of filaments severed by cofilin, which blocks annealing and depolymerization and allows more extensive severing by cofilin.

Xenopus laevis (taxid: 8355)

>sp|Q6DIF4|WDR1_XENTR WD repeat-containing protein 1 OS=Xenopus tropicalis GN=wdr1 PE=2 SV=1

 Score =  558 bits (1437), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 300/656 (45%), Positives = 398/656 (60%), Gaps = 65/656 (9%)

Query: 33  KYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAK 92
           K +FA+LP+ +RG   ++ GDPKG NFLYTNG SVIIRNIENPAI+DIYTEH+  V VA+
Sbjct: 6   KKVFASLPQVERGVAKIITGDPKGNNFLYTNGKSVIIRNIENPAIADIYTEHAHPVVVAR 65

Query: 93  YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI 152
           Y+PSGFYIASGD SGK+RIWDT  KEH+LK E+ P  G IKDI         + I V+  
Sbjct: 66  YAPSGFYIASGDTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAW---TEDSKRIAVVGE 122

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G      +  G V +WD                                           
Sbjct: 123 G-----REKFGSVFLWD------------------------------------------- 134

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
                TG+SVGEISG  K INS D K +RP+R++TGS+DN  A FEGPPFKFK T  +HS
Sbjct: 135 -----TGSSVGEISGNIKVINSVDIKQTRPYRLVTGSDDNCCAFFEGPPFKFKFTMADHS 189

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL-GNPAHKGGVYAVAWKPDGTQL 331
           RFV  VR+SP GS  ASAG DG++FLYDG + + V  L G+ AH GG+YAV+W  D TQL
Sbjct: 190 RFVNCVRFSPDGSRLASAGADGQIFLYDGKTGEKVGNLGGSKAHDGGIYAVSWSADSTQL 249

Query: 332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
           L+ASGDKT K+WD+   S V+ F +G +V DQQ+ CLWQ DYLL+VSLSG+I+YLD NNP
Sbjct: 250 LSASGDKTAKIWDVAANSAVTTFHLGTEVLDQQLGCLWQKDYLLSVSLSGYINYLDKNNP 309

Query: 392 STPIRVIKGHNKPITALAL--SPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN 449
           S P+RVIKGHNK I  + +  S  R T++TGSHDG I  W+A+TGEND   G GH NQ++
Sbjct: 310 SRPLRVIKGHNKSIQCMTVHNSDGRSTIYTGSHDGHINYWDAETGENDTFTGKGHTNQVS 369

Query: 450 GMKA-TGELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDE-NTLVTVTVKQI 506
            M   +   L TC +DDT++   L+S  YS  E VK+  QP+ + +     +VT+ + QI
Sbjct: 370 RMDLDSSNQLITCSMDDTVRYTSLTSKDYSSSESVKMDVQPKCVAVGSGGYVVTLCIGQI 429

Query: 507 SIVENGAKVSSL-PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE-LDHL 564
            ++++  KV ++  +DYEP ++++    G VAVGG D  VH+Y +   SL  + + L   
Sbjct: 430 VLLKDKKKVFAIDSLDYEPEAVAIHKGSGTVAVGGVDGNVHLYSIQGNSLKDEGKSLPVK 489

Query: 565 GPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVA 624
           G VTD ++S    +L  +DA++ V ++ V D     N  +G H AK   VAWSPD+   A
Sbjct: 490 GAVTDLAYSHDGAFLAVTDANKVVTVFNVADGYSEQNVYYGHH-AKAVSVAWSPDNEHFA 548

Query: 625 SGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           S  +D  + +W+L+ P   I I +AH    ++ L WLD   L +V  D   K W +
Sbjct: 549 SSGMDMMVYVWTLSDPDARIKIPDAHRLHHVSSLAWLDEHTLATVSHDACVKQWTV 604

Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins. Doesn't sever actin filaments alone, but caps the barbed ends of filaments severed by cofilin, which blocks annealing and depolymerization and allows more extensive severing by cofilin.

Xenopus tropicalis (taxid: 8364)

>sp|Q9W7F2|WDR1A_XENLA WD repeat-containing protein 1-A OS=Xenopus laevis GN=wdr1-a PE=2 SV=2

 Score =  534 bits (1376), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 290/656 (44%), Positives = 394/656 (60%), Gaps = 65/656 (9%)

Query: 33  KYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAK 92
           K +FA+LP+ +RG   +L GDPK        GN+ +  N                     
Sbjct: 6   KKVFASLPQMERGVAKILAGDPK--------GNNFLYTN--------------------- 36

Query: 93  YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI 152
                                   K  I++N  +P    I DI T  +  ++      S 
Sbjct: 37  -----------------------GKSVIIRNIDNP---AIADIYTEHAHQAVVARYAPS- 69

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           GFYIASGD SGK+RIWDT  KEH+LK E+ P  G IKDIAW+ D++R+ VVGEGRE+F  
Sbjct: 70  GFYIASGDTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFAS 129

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           VF+ +TG+SVGEI+G  K INS D K +RP+R++TGS+DN  A  EGPPFKFK T  +HS
Sbjct: 130 VFLWDTGSSVGEITGNIKVINSVDIKQTRPYRLVTGSDDNCCAFLEGPPFKFKFTMSDHS 189

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL-GNPAHKGGVYAVAWKPDGTQL 331
           RFV  VR+SP GS  ASAG DG++FLYDG + + V  L G+ AH GG+YAV+W PDGTQL
Sbjct: 190 RFVNCVRFSPDGSKLASAGADGQIFLYDGKTGEKVCSLGGSKAHDGGIYAVSWSPDGTQL 249

Query: 332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
           L+ASGDKT K+WD+   S V+ F +G+ V DQQ+ CLWQ DYLL+VSLSG+I+YLD NNP
Sbjct: 250 LSASGDKTTKIWDVAANSAVTTFNLGSDVLDQQLGCLWQKDYLLSVSLSGYINYLDKNNP 309

Query: 392 STPIRVIKGHNKPITALAL--SPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN 449
           + P+RVIKGHNK I  + +  S  R T++TGSHDG I  W+A+TGEND   G GH NQ++
Sbjct: 310 ARPLRVIKGHNKSIQCMTVNNSDGRSTIYTGSHDGHINYWDAETGENDTFTGKGHTNQVS 369

Query: 450 GMKATG-ELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDE-NTLVTVTVKQI 506
            M   G   L TC +DDT++   L S  YS  E VK+  QP+ + +     +VTV + QI
Sbjct: 370 SMDLDGCNQLITCSMDDTLRYTSLISKDYSSSESVKMDVQPKCVAVGSGGYVVTVCIGQI 429

Query: 507 SIVENGAKVSSL-PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE-LDHL 564
            ++++  KV ++  +DYEP ++++    G VAVGGAD KVH+Y +   SL  + + L   
Sbjct: 430 VLLKDKKKVFAIDSLDYEPEAVAIHKGSGTVAVGGADGKVHLYSIQGNSLKDEGKTLPAK 489

Query: 565 GPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVA 624
           G VTD ++S    +L  +DA++ V ++ V D     N  +G H AK   VAWSPD+   A
Sbjct: 490 GAVTDLAYSHDGAFLAVTDANKVVTVFSVADGYSEKNSYYGHH-AKALSVAWSPDNEHFA 548

Query: 625 SGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           S  +D  + +W+L+ P   I + +AH    ++ L WLD   L +V  D   K W +
Sbjct: 549 SSGMDMMVYVWTLSDPDTRIKMPDAHRLHHVSSLAWLDEHTLATVSHDACVKQWTV 604

Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins. Doesn't sever actin filaments alone, but caps the barbed ends of filaments severed by cofilin, which blocks annealing and depolymerization and allows more extensive severing by cofilin.

Xenopus laevis (taxid: 8355)

>sp|O93277|WDR1_CHICK WD repeat-containing protein 1 OS=Gallus gallus GN=WDR1 PE=2 SV=1

 Score =  527 bits (1357), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 291/689 (42%), Positives = 402/689 (58%), Gaps = 100/689 (14%)

Query: 2   IFATLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLY 61
           +FA+LP+ +RG   ++GGDPKG NFLY                                 
Sbjct: 10  VFASLPQVERGVSKIIGGDPKGNNFLY--------------------------------- 36

Query: 62  TNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHIL 121
           TNG  V+IRNI+NPAI+DIYTEH+  V VAKY+PSGFYIASGD+SGK+RIWDT  KEH+L
Sbjct: 37  TNGKCVVIRNIDNPAIADIYTEHAHQVVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLL 96

Query: 122 KNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEF 181
           K E+ P  G IKD   L      + I V+  G      +  G V +WD            
Sbjct: 97  KYEYQPFAGKIKD---LAWTEDSKRIAVVGEGR-----EKFGAVFLWD------------ 136

Query: 182 HPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSR 241
                                               +G+SVGEI+G +K INS D K +R
Sbjct: 137 ------------------------------------SGSSVGEITGHNKVINSVDIKQTR 160

Query: 242 PFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDG 301
           P+R+ TGS+DN  A FEGPPFKFK T  +H+RFV  VR+SP G+ FA+A  DG++F+YDG
Sbjct: 161 PYRLATGSDDNCAAFFEGPPFKFKFTLSDHTRFVNCVRFSPDGNRFATASADGQIFIYDG 220

Query: 302 ASADLVSEL-GNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQV 360
            + + V  L G  AH GG+YA++W PD +QLL+ASGDKT K+WD+   SVVS F MG+ V
Sbjct: 221 KTGEKVCALGGGKAHDGGIYAISWSPDSSQLLSASGDKTAKIWDVGANSVVSTFNMGSNV 280

Query: 361 EDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGT--VF 418
            DQQ+ CLWQ D+LL++SLSG+I+YLD NNP  P+RVIKGH+K I  L +  + G   ++
Sbjct: 281 LDQQLGCLWQKDHLLSLSLSGYINYLDKNNPDKPLRVIKGHSKSIQCLTVHKNGGKSYIY 340

Query: 419 TGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGEL--LYTCGIDDTIKQVDLSSNA 476
           +GS+DG I  W++ TGEND   G GH NQ++ M A  E+  L TC +DDT++  +LS   
Sbjct: 341 SGSNDGHINYWDSDTGENDGFSGKGHTNQVSRM-AVDEMDQLVTCSMDDTVRYTNLSKRD 399

Query: 477 YSGPE-VKLGSQPRGLDIDENTL-VTVTVKQISIVENGAKVSSL-PIDYEPSSISLDHEH 533
           YSG + VK+  QP+ L +      V + + QI ++++  K  ++  + YEP ++++    
Sbjct: 400 YSGQDAVKMDVQPKCLAVGPGGYTVVLCIGQIVLMKDKKKCFAIDDLGYEPEAVAVHPGG 459

Query: 534 GLVAVGGADSKVHIYELNNKSL-SPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYR 592
           G VAVGG D  V +Y +   SL S    L+  GPVTD ++S    +L   DA++ V ++ 
Sbjct: 460 GSVAVGGTDGNVRLYSIQGTSLKSDDKTLEAKGPVTDLAYSHDGAFLAVCDANKVVTVFS 519

Query: 593 VPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQ 652
           VPD  + HN  +G H AKV C+AWSPD+   ASG +D  + +W+++ P   I I +AH  
Sbjct: 520 VPDGYVEHNVFYGHH-AKVVCIAWSPDNEHFASGGMDMMVYVWTVSDPETRIKIPDAHRL 578

Query: 653 SQITRLQWLDNDLLVSVGQDCNTKIWEIA 681
             ++ L WLD   LV+   D + K W I+
Sbjct: 579 HHVSGLAWLDEHTLVTTSHDASVKEWSIS 607

Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins.

Gallus gallus (taxid: 9031)

>sp|Q2KJH4|WDR1_BOVIN WD repeat-containing protein 1 OS=Bos taurus GN=WDR1 PE=2 SV=3

 Score =  520 bits (1340), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 284/658 (43%), Positives = 397/658 (60%), Gaps = 67/658 (10%)

Query: 33  KYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAK 92
           K +FA+LP+ +RG   ++GGDPKG +FL                    YT   C      
Sbjct: 6   KKVFASLPQVERGVSKIVGGDPKGNSFL--------------------YTNGKCV----- 40

Query: 93  YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI 152
                                      IL+N  +P    I DI T  +   +      S 
Sbjct: 41  ---------------------------ILRNIDNP---AIADIYTEHAHQVVVAKYAPS- 69

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           GFYIASGD+SGK+RIWDT  KEH+LK E+ P  G IKDIAW+ D++R+ VVGEGRE+FG 
Sbjct: 70  GFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGA 129

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           VF+ ++G+SVGEI+G +K INS D K SRP+R++TGS+DN  A FEGPPFKFK T  +H 
Sbjct: 130 VFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLVTGSDDNCAAFFEGPPFKFKFTISDHG 189

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL-GNPAHKGGVYAVAWKPDGTQL 331
           RFV  VR+SP G+ FA+A  DG++F+YDG + + V  L G+ AH GG+YA++W PD T L
Sbjct: 190 RFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHL 249

Query: 332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
           L+ASGDKT K+WD+   SVV+ F MG+ V DQQ+ CLWQ D+LL++SLSG+I+YLD NNP
Sbjct: 250 LSASGDKTSKIWDVNVNSVVNTFTMGSNVLDQQLGCLWQKDHLLSISLSGYINYLDKNNP 309

Query: 392 STPIRVIKGHNKPITALALSPDRGT--VFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN 449
           S P+RVIKGH+K I  L +  + G   +++GSHDG I  W+++TGEND   G GH NQ++
Sbjct: 310 SKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDSFAGKGHTNQVS 369

Query: 450 GMKAT--GELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDENTL-VTVTVKQ 505
            M     G+L+ +C +DDT++  +L+   YSG   VKL  QP+ L +      V V + Q
Sbjct: 370 RMTVDEHGQLV-SCSMDDTVRYTNLTLRDYSGQGVVKLDVQPKCLAVGPGGYTVVVCIGQ 428

Query: 506 ISIVENGAKVSSLP-IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE-LDH 563
           I ++++  K  S+    YEP  +++      VAVGGAD  V +Y +   +L  + + L+ 
Sbjct: 429 IVLLKDQRKCFSIDNPGYEPEVVAVHPGGETVAVGGADGNVRLYSILGTTLKDEGKLLEA 488

Query: 564 LGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALV 623
            GPVTD +FS    +L   DA + V ++ V D    +N  +G H AK+ C+AWSPD+   
Sbjct: 489 KGPVTDLAFSHDGAFLAVCDASKVVTVFSVADGYSENNVFYGHH-AKIVCLAWSPDNEHF 547

Query: 624 ASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIA 681
           ASG +D  + +W+L+ P   + I++AH    ++ L WLD   LV+   D + K W IA
Sbjct: 548 ASGGMDMMVYVWTLSDPETRVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVKEWTIA 605

Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins.

Bos taurus (taxid: 9913)

>sp|Q5RKI0|WDR1_RAT WD repeat-containing protein 1 OS=Rattus norvegicus GN=Wdr1 PE=1 SV=3

 Score =  520 bits (1339), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 285/657 (43%), Positives = 397/657 (60%), Gaps = 67/657 (10%)

Query: 33  KYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAK 92
           K +FA+LP+ +RG   +LGGDPKG NFL                    YT   C      
Sbjct: 6   KKVFASLPQVERGVSKILGGDPKGDNFL--------------------YTNGKCV----- 40

Query: 93  YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI 152
                                      IL+N  +P    + DI T  +   +      S 
Sbjct: 41  ---------------------------ILRNIDNP---AVADIYTEHAHQVVVAKYAPS- 69

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           GFYIASGDISGK+RIWDT  KEHILK E+ P  G IKDIAW+ D++R+ VVGEGRE+FG 
Sbjct: 70  GFYIASGDISGKLRIWDTTQKEHILKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGA 129

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           VF+ +TG+SVGEI+G +K INS D K +RP+R+ TGS+DN  A FEGPPFKFK T  +HS
Sbjct: 130 VFLWDTGSSVGEITGHNKVINSVDIKQNRPYRLATGSDDNCAAFFEGPPFKFKFTIGDHS 189

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL-GNPAHKGGVYAVAWKPDGTQL 331
           RFV  VR+SP G+ FA+A  DG++F+YDG + + V  L G+ AH GG+YA++W PD T L
Sbjct: 190 RFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHL 249

Query: 332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
           L+ASGDKT K+WD+   SVVS F MG+ V DQQ+ CLWQ D+LL++SLSG+I+YLD NNP
Sbjct: 250 LSASGDKTSKIWDVNVNSVVSTFPMGSNVLDQQLGCLWQKDHLLSISLSGYINYLDKNNP 309

Query: 392 STPIRVIKGHNKPITALALSPDRGT--VFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN 449
           S P+RVIKGH+K I  L +  + G   +++GSHDG I  W+++TGEND   G GH NQ++
Sbjct: 310 SKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDSFSGKGHTNQVS 369

Query: 450 GMKA--TGELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDENTL-VTVTVKQ 505
            M    +G+L+ +C +DDT++  +L+   YSG   VKL  QP+ + +      V V + Q
Sbjct: 370 RMTVDESGQLV-SCSMDDTVRYTNLTLRDYSGQGVVKLDVQPKCVAVGPGGYTVVVCIGQ 428

Query: 506 ISIVENGAKVSSLP-IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE-LDH 563
           I ++++  K  S+    YEP  +++      VAVGG+D  V +Y +   +L  + + L+ 
Sbjct: 429 IVLLKDQKKCFSIDNPGYEPEVVAVHPGGDTVAVGGSDGNVRVYSILGATLKDEGKLLEA 488

Query: 564 LGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALV 623
            GPVTD ++S    +L   DA + V ++ V D    +N  +G H AK+ C+AWSPD+   
Sbjct: 489 KGPVTDLAYSHDGAFLAVCDASKVVTVFSVADGYSENNVFYGHH-AKIVCLAWSPDNEHF 547

Query: 624 ASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           ASG +D  + +W+L+ P   + I++AH    ++ L WLD   LV+   D + K W I
Sbjct: 548 ASGGMDMMVYVWTLSDPETKVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVKEWTI 604

Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins.

Rattus norvegicus (taxid: 10116)

>sp|O88342|WDR1_MOUSE WD repeat-containing protein 1 OS=Mus musculus GN=Wdr1 PE=1 SV=3

 Score =  519 bits (1336), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 284/656 (43%), Positives = 393/656 (59%), Gaps = 65/656 (9%)

Query: 33  KYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAK 92
           K +FA+LP+ +RG   +LGGDPKG +FL                    YT   C      
Sbjct: 6   KKVFASLPQVERGVSKILGGDPKGDHFL--------------------YTNGKCV----- 40

Query: 93  YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI 152
                                      IL+N  +P    I DI T  +   +      S 
Sbjct: 41  ---------------------------ILRNIDNP---AIADIYTEHAHQVVVAKYAPS- 69

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           GFYIASGDISGK+RIWDT  KEH+LK E+ P  G IKDIAW+ D++R+ VVGEGRE+FG 
Sbjct: 70  GFYIASGDISGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGA 129

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           VF+ +TG+SVGEI+G +K INS D K +RP+R+ TGS+DN  A FEGPPFKFK T  +HS
Sbjct: 130 VFLWDTGSSVGEITGHNKVINSVDIKQTRPYRLATGSDDNCAAFFEGPPFKFKFTIGDHS 189

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG-NPAHKGGVYAVAWKPDGTQL 331
           RFV  VR+SP G+ FA+A  DG++F+YDG + + V  LG + AH GG+YA++W PD T L
Sbjct: 190 RFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGESKAHDGGIYAISWSPDSTHL 249

Query: 332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
           L+ASGDKT K+WD+   SVVS F MG+ V DQQ+ CLWQ D+LL++SLSG+I+YLD NNP
Sbjct: 250 LSASGDKTSKIWDVNVNSVVSTFPMGSNVLDQQLGCLWQKDHLLSISLSGYINYLDKNNP 309

Query: 392 STPIRVIKGHNKPITALALSPDRGT--VFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN 449
           S P+RVIKGH+K I  L +  + G   +++GSHDG I  W+++TGEND   G GH NQ++
Sbjct: 310 SKPLRVIKGHSKSIQCLTVHRNGGKSYIYSGSHDGHINYWDSETGENDSFSGKGHTNQVS 369

Query: 450 GMKAT-GELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDENTL-VTVTVKQI 506
            M     E L +C +DDT++  +L+   YSG   VKL  QP+ + +      V V + QI
Sbjct: 370 RMTVNESEQLVSCSMDDTVRYTNLTLRDYSGQGVVKLDVQPKCVAVGPGGYTVVVCIGQI 429

Query: 507 SIVENGAKVSSLP-IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE-LDHL 564
            ++++  K  S+    YEP  +++      VAVGG D  V +Y +   +L  + + L+  
Sbjct: 430 VLLKDQKKCFSIDNPGYEPEVVAVHPGGDTVAVGGTDGNVRVYSILASTLKDEGKLLEAK 489

Query: 565 GPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVA 624
           GPVTD ++S    +L   DA + V ++ V D    +N  +G H AK+ C+AWSPD+   A
Sbjct: 490 GPVTDVAYSHDGAFLAVCDASKVVTVFSVADGYSENNVFYGHH-AKIVCLAWSPDNEHFA 548

Query: 625 SGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           SG +D  + +W+L+ P   + I++AH    ++ L WLD   LV+   D + K W I
Sbjct: 549 SGGMDMMVYVWTLSDPETKVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVKEWTI 604

Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins.

Mus musculus (taxid: 10090)

>sp|O75083|WDR1_HUMAN WD repeat-containing protein 1 OS=Homo sapiens GN=WDR1 PE=1 SV=4

 Score =  511 bits (1317), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 280/657 (42%), Positives = 393/657 (59%), Gaps = 67/657 (10%)

Query: 33  KYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAK 92
           K +FA+LP+ +RG   ++GGDPKG NFL                    YT   C      
Sbjct: 6   KKVFASLPQVERGVSKIIGGDPKGNNFL--------------------YTNGKCV----- 40

Query: 93  YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI 152
                                      IL+N  +P    + DI T  +   +      S 
Sbjct: 41  ---------------------------ILRNIDNP---ALADIYTEHAHQVVVAKYAPS- 69

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           GFYIASGD+SGK+RIWDT  KEH+LK E+ P  G IKDIAW+ D++R+ VVGEGRE+FG 
Sbjct: 70  GFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGA 129

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           VF+ ++G+SVGEI+G +K INS D K SRP+R+ TGS+DN  A FEGPPFKFK T  +HS
Sbjct: 130 VFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFTIGDHS 189

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL-GNPAHKGGVYAVAWKPDGTQL 331
           RFV  VR+SP G+ FA+A  DG++++YDG + + V  L G+ AH GG+YA++W PD T L
Sbjct: 190 RFVNCVRFSPDGNRFATASADGQIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHL 249

Query: 332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
           L+ASGDKT K+WD+   SVVS F MG+ V DQQ+ CLWQ D+LL+VSLSG+I+YLD NNP
Sbjct: 250 LSASGDKTSKIWDVSVNSVVSTFPMGSTVLDQQLGCLWQKDHLLSVSLSGYINYLDRNNP 309

Query: 392 STPIRVIKGHNKPITALALSPDRGT--VFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN 449
           S P+ VIKGH+K I  L +  + G   +++GSHDG I  W+++TGEND   G GH NQ++
Sbjct: 310 SKPLHVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDSFAGKGHTNQVS 369

Query: 450 GMKA--TGELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDENTL-VTVTVKQ 505
            M    +G+L+ +C +DDT++   L    YSG   VKL  QP+ + +      V V + Q
Sbjct: 370 RMTVDESGQLI-SCSMDDTVRYTSLMLRDYSGQGVVKLDVQPKCVAVGPGGYAVVVCIGQ 428

Query: 506 ISIVENGAKVSSLP-IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE-LDH 563
           I ++++  K  S+    YEP  +++      VA+GG D  V +Y +   +L  + + L+ 
Sbjct: 429 IVLLKDQRKCFSIDNPGYEPEVVAVHPGGDTVAIGGVDGNVRLYSILGTTLKDEGKLLEA 488

Query: 564 LGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALV 623
            GPVTD ++S    +L   DA + V ++ V D    +N  +G H AK+ C+AWSPD+   
Sbjct: 489 KGPVTDVAYSHDGAFLAVCDASKVVTVFSVADGYSENNVFYGHH-AKIVCLAWSPDNEHF 547

Query: 624 ASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           ASG +D  + +W+L+ P   + I++AH    ++ L WLD   LV+   D + K W I
Sbjct: 548 ASGGMDMMVYVWTLSDPETRVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVKEWTI 604

Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins.

Homo sapiens (taxid: 9606)

>sp|Q11176|WDR1_CAEEL Actin-interacting protein 1 OS=Caenorhabditis elegans GN=unc-78 PE=1 SV=1

 Score =  499 bits (1286), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 275/662 (41%), Positives = 381/662 (57%), Gaps = 72/662 (10%)

Query: 35  IFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYS 94
           +F +LPRT RG  +VLG  P G    Y NG SV    + +   ++IYTEHS    VAK S
Sbjct: 9   LFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTS 68

Query: 95  PSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF 154
           PSG+Y ASGD+ G VRIWDT    HILK       GP+KDI                   
Sbjct: 69  PSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDIS------------------ 110

Query: 155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF 214
                        WD+                         +++R+  VGEGRERFGHVF
Sbjct: 111 -------------WDS-------------------------ESKRIAAVGEGRERFGHVF 132

Query: 215 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF 274
           + +TGTS G ++GQ++ +NS DFKPSRPFRII+GS+DNT+A+FEGPPFKFK T  EH++F
Sbjct: 133 LFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF 192

Query: 275 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLV-----SELGNPAHKGGVYAVAWKPDGT 329
           V +VRY+P GS FAS G DG + LY+G             L N AH G V+ + W PDGT
Sbjct: 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT 252

Query: 330 QLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVN 389
           ++ +AS DKT K+W++ T  V     +G ++EDQQ+  +W    L+++S +GFI++++  
Sbjct: 253 KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE 312

Query: 390 NPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN 449
             S   +V  GHNK ITAL+ S D  T+F+   +G I  W+  TG ++RV    H   I 
Sbjct: 313 LGSID-QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMIT 371

Query: 450 GMKATGE-LLYTCGIDDTIKQVDLSSNAYSGPEV---KLGSQPRGLDI--DENTLVTVTV 503
           G+K T +  L+T   DD +K V    +     +    KL SQP GL +  D +  V    
Sbjct: 372 GIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACY 431

Query: 504 KQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDH 563
           K I+I  +G K++ +PI Y  S ++L ++   VAVGG DSKVH+Y+L+  S+S    + H
Sbjct: 432 KHIAIYSHG-KLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH 490

Query: 564 LGPVTDCSFSPSNEYLVASDAHRKVVLYRVP-DFELAHNKEWGFHSAKVNCVAWSPDSAL 622
              +T  +FS +  +LVA+D  RKV+ Y V  +FELAH   W FH+AKV CV+WSPD+  
Sbjct: 491 PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVR 550

Query: 623 VASGSLDTTIIIWSLASPAKH-IIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIA 681
           +A+GSLD ++I+W++  P+ H IIIK AH  S +  + WL+   +VS GQD N K W + 
Sbjct: 551 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV- 609

Query: 682 PF 683
           PF
Sbjct: 610 PF 611

Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins. Regulator of actin organization in myofibrils.

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	683
328719143	603	PREDICTED: actin-interacting protein 1-l	0.872	0.988	0.694	0.0
328719145	604	PREDICTED: actin-interacting protein 1-l	0.872	0.986	0.693	0.0
350417912	602	PREDICTED: actin-interacting protein 1-l	0.866	0.983	0.698	0.0
340715668	602	PREDICTED: actin-interacting protein 1-l	0.866	0.983	0.696	0.0
383853060	603	PREDICTED: actin-interacting protein 1-l	0.866	0.981	0.697	0.0
270011670	602	hypothetical protein TcasGA2_TC005722 [T	0.872	0.990	0.692	0.0
350417914	603	PREDICTED: actin-interacting protein 1-l	0.866	0.981	0.697	0.0
91088693	613	PREDICTED: similar to wd-repeat protein	0.866	0.965	0.694	0.0
340715670	603	PREDICTED: actin-interacting protein 1-l	0.866	0.981	0.695	0.0
328790339	603	PREDICTED: actin-interacting protein 1 [	0.866	0.981	0.682	0.0

>gi|328719143|ref|XP_003246675.1| PREDICTED: actin-interacting protein 1-like isoform 2 [Acyrthosiphon pisum]

 Score =  948 bits (2451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/655 (69%), Positives = 530/655 (80%), Gaps = 59/655 (9%)

Query: 32  NKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVA 91
           NKYI++TLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIR+IENPAISD+YTEHSCAVNVA
Sbjct: 5   NKYIYSTLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRDIENPAISDVYTEHSCAVNVA 64

Query: 92  KYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS 151
           KYSPSGFYIASGD SGK+RIWDTVNKEHILKNEFHP GGPIKDI                
Sbjct: 65  KYSPSGFYIASGDQSGKIRIWDTVNKEHILKNEFHPFGGPIKDIS--------------- 109

Query: 152 IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFG 211
                           W   N+  +                         VVGEGRERFG
Sbjct: 110 ----------------WSPDNQRMV-------------------------VVGEGRERFG 128

Query: 212 HVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH 271
           HVFM+ETGTSVGEI+GQSKPINSCDF+PSRPFRI+TGSEDNTI VFEGPPFKFKMTKQ+H
Sbjct: 129 HVFMAETGTSVGEITGQSKPINSCDFRPSRPFRIVTGSEDNTIGVFEGPPFKFKMTKQDH 188

Query: 272 SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQL 331
           SRFVQAVR+SP+G+ FASAGFDGKVFLY+G +ADLVSE+G+PAHKGGVY VAW  D T+L
Sbjct: 189 SRFVQAVRFSPNGNFFASAGFDGKVFLYEGTNADLVSEIGSPAHKGGVYGVAWSADSTRL 248

Query: 332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
           LT+SGDKTCKLWD+ETKSVVSEF++GNQVEDQQVSCLWQG+YLLTVSL+GFI+YLDVNNP
Sbjct: 249 LTSSGDKTCKLWDVETKSVVSEFVIGNQVEDQQVSCLWQGNYLLTVSLNGFITYLDVNNP 308

Query: 392 STPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGM 451
             PIR+IKGHNKPIT LALSPDR T++TGSHDG IT WNA  GENDRV+G GHGNQINGM
Sbjct: 309 EKPIRIIKGHNKPITVLALSPDRSTIYTGSHDGNITNWNAANGENDRVKGVGHGNQINGM 368

Query: 452 KATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVEN 511
           K   + LYTCGIDD+++QVD+ SN+Y+  +VKL +QPRG+D + N +VTVT+K+I +++N
Sbjct: 369 KLDNDYLYTCGIDDSLRQVDVKSNSYTDLQVKLNAQPRGMDFNSNVIVTVTIKEIIVLKN 428

Query: 512 GAKVSSLPIDYEPSSISLDHEHGLVAVGGA-DSKVHIYELNNKS--LSPKAELDHLGPVT 568
             KV +LP+DYEPS++++    G VAVGGA D+KVH+Y++N  +  L   AE DHLGP+T
Sbjct: 429 EKKVFNLPVDYEPSAVAISPGAGYVAVGGALDNKVHVYKINESTYNLEFVAECDHLGPIT 488

Query: 569 DCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSL 628
           DCSFSP  EYLVASDA+RKV+LY+VP+F LAH ++WGFH A+VN VAWSP+S  VASGSL
Sbjct: 489 DCSFSPDGEYLVASDANRKVILYKVPEFNLAHKQDWGFHLARVNSVAWSPNSKQVASGSL 548

Query: 629 DTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIAPF 683
           DTTII+WS+ SP KH IIKNAHPQSQITR+ WLD++ +VSVGQDCNTKIW + P 
Sbjct: 549 DTTIIVWSVTSPNKHTIIKNAHPQSQITRVLWLDDETIVSVGQDCNTKIWNVTPI 603

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328719145|ref|XP_001943831.2| PREDICTED: actin-interacting protein 1-like isoform 1 [Acyrthosiphon pisum]

 Score =  944 bits (2439), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/656 (69%), Positives = 530/656 (80%), Gaps = 60/656 (9%)

Query: 32  NKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVA 91
           NKYI++TLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIR+IENPAISD+YTEHSCAVNVA
Sbjct: 5   NKYIYSTLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRDIENPAISDVYTEHSCAVNVA 64

Query: 92  KYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS 151
           KYSPSGFYIASGD SGK+RIWDTVNKEHILKNEFHP GGPIKDI                
Sbjct: 65  KYSPSGFYIASGDQSGKIRIWDTVNKEHILKNEFHPFGGPIKDIS--------------- 109

Query: 152 IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFG 211
                           W   N+  +                         VVGEGRERFG
Sbjct: 110 ----------------WSPDNQRMV-------------------------VVGEGRERFG 128

Query: 212 HVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH 271
           HVFM+ETGTSVGEI+GQSKPINSCDF+PSRPFRI+TGSEDNTI VFEGPPFKFKMTKQ+H
Sbjct: 129 HVFMAETGTSVGEITGQSKPINSCDFRPSRPFRIVTGSEDNTIGVFEGPPFKFKMTKQDH 188

Query: 272 SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQL 331
           SRFVQAVR+SP+G+ FASAGFDGKVFLY+G +ADLVSE+G+PAHKGGVY VAW  D T+L
Sbjct: 189 SRFVQAVRFSPNGNFFASAGFDGKVFLYEGTNADLVSEIGSPAHKGGVYGVAWSADSTRL 248

Query: 332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
           LT+SGDKTCKLWD+ETKSVVSEF++GNQVEDQQVSCLWQG+YLLTVSL+GFI+YLDVNNP
Sbjct: 249 LTSSGDKTCKLWDVETKSVVSEFVIGNQVEDQQVSCLWQGNYLLTVSLNGFITYLDVNNP 308

Query: 392 STPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGM 451
             PIR+IKGHNKPIT LALSPDR T++TGSHDG IT WNA  GENDRV+G GHGNQINGM
Sbjct: 309 EKPIRIIKGHNKPITVLALSPDRSTIYTGSHDGNITNWNAANGENDRVKGVGHGNQINGM 368

Query: 452 KATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVEN 511
           K   + LYTCGIDD+++QVD+ SN+Y+  +VKL +QPRG+D + N +VTVT+K+I +++N
Sbjct: 369 KLDNDYLYTCGIDDSLRQVDVKSNSYTDLQVKLNAQPRGMDFNSNVIVTVTIKEIIVLKN 428

Query: 512 GAKVSSLPIDYEPSSISLDHEHGLVAVGGA-DSKVHIYELNNKS--LSPKAELDHLGPVT 568
             KV +LP+DYEPS++++    G VAVGGA D+KVH+Y++N  +  L   AE DHLGP+T
Sbjct: 429 EKKVFNLPVDYEPSAVAISPGAGYVAVGGALDNKVHVYKINESTYNLEFVAECDHLGPIT 488

Query: 569 DCSFSPSNEYLVASDAHRKVVLYRVPDFE-LAHNKEWGFHSAKVNCVAWSPDSALVASGS 627
           DCSFSP  EYLVASDA+RKV+LY+VP+F  LAH ++WGFH A+VN VAWSP+S  VASGS
Sbjct: 489 DCSFSPDGEYLVASDANRKVILYKVPEFNSLAHKQDWGFHLARVNSVAWSPNSKQVASGS 548

Query: 628 LDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIAPF 683
           LDTTII+WS+ SP KH IIKNAHPQSQITR+ WLD++ +VSVGQDCNTKIW + P 
Sbjct: 549 LDTTIIVWSVTSPNKHTIIKNAHPQSQITRVLWLDDETIVSVGQDCNTKIWNVTPI 604

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350417912|ref|XP_003491641.1| PREDICTED: actin-interacting protein 1-like isoform 1 [Bombus impatiens]

 Score =  939 bits (2428), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/650 (69%), Positives = 526/650 (80%), Gaps = 58/650 (8%)

Query: 33  KYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAK 92
           KYIFATLPRTQRGQP+VLGGDPKGKNFLYTNGNSVIIRNI+NPAI+DIYTEHSC VNVAK
Sbjct: 6   KYIFATLPRTQRGQPLVLGGDPKGKNFLYTNGNSVIIRNIDNPAIADIYTEHSCPVNVAK 65

Query: 93  YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI 152
           YSPSGFYIASGD SGKVRIWDTVNKEHILKNEFHPIGGPIKDI                 
Sbjct: 66  YSPSGFYIASGDQSGKVRIWDTVNKEHILKNEFHPIGGPIKDIA---------------- 109

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
                          W   N+  +                         VVGEGRERFGH
Sbjct: 110 ---------------WSPDNQRMV-------------------------VVGEGRERFGH 129

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           VFM+ETGTSVGEISGQSKPINSCDF+P+RPFR+ITGSEDNTIAVFEGPPFKFKMTKQEH+
Sbjct: 130 VFMAETGTSVGEISGQSKPINSCDFRPARPFRLITGSEDNTIAVFEGPPFKFKMTKQEHT 189

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL 332
           RFVQAVRYSPSG+ FASAGFDGKVF+YDG S+DLV E+G+PAH+GGVY VAWKPDGTQLL
Sbjct: 190 RFVQAVRYSPSGNLFASAGFDGKVFIYDGTSSDLVGEVGSPAHQGGVYGVAWKPDGTQLL 249

Query: 333 TASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS 392
           TASGDKTCKLWD+ET+S+VSEF MG+ V+DQQVSCLWQ  +LL+VSLSGFI+YLDV NP+
Sbjct: 250 TASGDKTCKLWDVETRSLVSEFNMGSTVDDQQVSCLWQDKHLLSVSLSGFINYLDVANPT 309

Query: 393 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK 452
            P+R+IKGHNKPIT L LSPDRGT++TGSHDG+IT WNAKTG+NDRVQG GHGNQINGMK
Sbjct: 310 KPLRIIKGHNKPITVLTLSPDRGTIYTGSHDGYITNWNAKTGDNDRVQGHGHGNQINGMK 369

Query: 453 ATGELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDENTLVTVTVKQISIVEN 511
           AT  LLYT GIDDT++ VD+ +N Y+    VKL SQPRGLDI  +  V  TV+QI++ ++
Sbjct: 370 ATKNLLYTAGIDDTLRSVDIDTNTYTDTAIVKLDSQPRGLDIYTDLAVIATVRQITVTQD 429

Query: 512 GAKVSSLPIDYEPSSISLDHEHGLVAVGG-ADSKVHIYELNNKSLSPKAELDHLGPVTDC 570
           G KVS+  IDYEPS +S++ E+G VA+G  +D+ + IY L+  +L+PK EL+HLG VTD 
Sbjct: 430 GRKVSNTSIDYEPSCVSINQENGDVAIGATSDNMIRIYTLSGTNLTPKMELEHLGTVTDA 489

Query: 571 SFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDT 630
           ++SP ++YLVA D +RKVVLY VP+++LAHN+EWGFH+A+VN VAW P+SA+VASGSLDT
Sbjct: 490 AYSPDSKYLVACDTNRKVVLYTVPEYKLAHNREWGFHNARVNSVAWCPNSAMVASGSLDT 549

Query: 631 TIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           TIIIWS+ +PAKH IIKNAHPQSQITRL WLD + L+SVGQDCNTKIW I
Sbjct: 550 TIIIWSVTNPAKHTIIKNAHPQSQITRLVWLDEETLISVGQDCNTKIWRI 599

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715668|ref|XP_003396331.1| PREDICTED: actin-interacting protein 1-like isoform 1 [Bombus terrestris]

 Score =  939 bits (2426), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/650 (69%), Positives = 526/650 (80%), Gaps = 58/650 (8%)

Query: 33  KYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAK 92
           KYIFATLPRTQRGQP+VLGGDPKGKNFLYTNGNSVIIRNI+NPAI+DIYTEHSC VNVAK
Sbjct: 6   KYIFATLPRTQRGQPLVLGGDPKGKNFLYTNGNSVIIRNIDNPAIADIYTEHSCPVNVAK 65

Query: 93  YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI 152
           YSPSGFYIASGD SGKVRIWDTVNKEHILKNEFHPIGGPIKDI                 
Sbjct: 66  YSPSGFYIASGDQSGKVRIWDTVNKEHILKNEFHPIGGPIKDIA---------------- 109

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
                          W   N+  +                         VVGEGRERFGH
Sbjct: 110 ---------------WSPDNQRMV-------------------------VVGEGRERFGH 129

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           VFM+ETGTSVGEISGQSKPINSCDF+P+RPFR+ITGSEDNTIAVFEGPPFKFKMTKQEH+
Sbjct: 130 VFMAETGTSVGEISGQSKPINSCDFRPTRPFRLITGSEDNTIAVFEGPPFKFKMTKQEHT 189

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL 332
           RFVQAVRYSPSG+ FASAGFDGKVF+YDG S+DLV E+G+PAH+GGVY VAWKPDGTQLL
Sbjct: 190 RFVQAVRYSPSGNLFASAGFDGKVFIYDGTSSDLVGEVGSPAHQGGVYGVAWKPDGTQLL 249

Query: 333 TASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS 392
           TASGDKTCKLWD+ET+S+VSEF MG+ V+DQQVSCLWQ  +LL+VSLSGFI+YLD+ NP+
Sbjct: 250 TASGDKTCKLWDVETRSLVSEFNMGSTVDDQQVSCLWQDKHLLSVSLSGFINYLDIANPT 309

Query: 393 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK 452
            P+R+IKGHNKPIT L LSPDRGT++TGSHDG+IT WNAKTGENDRVQG GHGNQINGMK
Sbjct: 310 KPLRIIKGHNKPITVLTLSPDRGTIYTGSHDGYITNWNAKTGENDRVQGHGHGNQINGMK 369

Query: 453 ATGELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDENTLVTVTVKQISIVEN 511
           AT  LLYT GIDDT++ V++ +N Y+    VKL SQPRGLDI  +  V  TV+QI++ ++
Sbjct: 370 ATKNLLYTAGIDDTLRSVNIDTNTYTDTAIVKLDSQPRGLDIYTDLAVIATVRQITVTQD 429

Query: 512 GAKVSSLPIDYEPSSISLDHEHGLVAVGG-ADSKVHIYELNNKSLSPKAELDHLGPVTDC 570
           G KVS+  IDYEPS +S++ E+G VA+G  +D+ + IY L+  +L+PK EL+HLG VTD 
Sbjct: 430 GRKVSNTSIDYEPSCVSINQENGDVAIGATSDNMIRIYTLSGTNLTPKMELEHLGTVTDA 489

Query: 571 SFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDT 630
           ++SP ++YLVA D +RKVVLY VP+++LAHN+EWGFH+A+VN VAW P+SA+VASGSLDT
Sbjct: 490 AYSPDSKYLVACDTNRKVVLYTVPEYKLAHNREWGFHNARVNSVAWCPNSAMVASGSLDT 549

Query: 631 TIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           TIIIWS+ +PAKH IIKNAHPQSQITRL WLD + L+SVGQDCNTKIW I
Sbjct: 550 TIIIWSVTNPAKHTIIKNAHPQSQITRLVWLDEETLISVGQDCNTKIWRI 599

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853060|ref|XP_003702042.1| PREDICTED: actin-interacting protein 1-like [Megachile rotundata]

 Score =  937 bits (2421), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/651 (69%), Positives = 529/651 (81%), Gaps = 59/651 (9%)

Query: 33  KYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAK 92
           KYIFATLPRTQRGQP+VLGGDPKGKNFLYTNGNSVIIRNI+NPAI+DIYTEHSC VNVAK
Sbjct: 6   KYIFATLPRTQRGQPLVLGGDPKGKNFLYTNGNSVIIRNIDNPAIADIYTEHSCPVNVAK 65

Query: 93  YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI 152
           YSPSGFYIASGD SGKVRIWDTVNKEHILKNEFHPIGGPIKDI                 
Sbjct: 66  YSPSGFYIASGDQSGKVRIWDTVNKEHILKNEFHPIGGPIKDIA---------------- 109

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
                          W   N+  +                         VVGEGRERFGH
Sbjct: 110 ---------------WSPDNQRMV-------------------------VVGEGRERFGH 129

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           VFM+ETGTSVGEISGQSKPINSCDF+P+RPFR+ITGSEDNTIAVFEGPPFKFKMTKQEH+
Sbjct: 130 VFMAETGTSVGEISGQSKPINSCDFRPARPFRLITGSEDNTIAVFEGPPFKFKMTKQEHT 189

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL 332
           RFVQAVRYSPSG+ FASAGFDGKVF+YDG S+DLV E+G+PAH+GGVY VAWKPDGTQLL
Sbjct: 190 RFVQAVRYSPSGNLFASAGFDGKVFIYDGTSSDLVGEVGSPAHQGGVYGVAWKPDGTQLL 249

Query: 333 TASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS 392
           TASGDKTCKLWD+ET+S+VSEF MG+ V+DQQVSCLWQG++LL+VSLSGFI+YLDV+NP+
Sbjct: 250 TASGDKTCKLWDVETRSLVSEFNMGSTVDDQQVSCLWQGNHLLSVSLSGFINYLDVDNPA 309

Query: 393 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK 452
            PIR+IKGHNKPIT L LS DR T++TGSHDG+IT WNA TGENDRVQG GHGNQINGMK
Sbjct: 310 KPIRIIKGHNKPITVLTLSSDRSTIYTGSHDGYITNWNATTGENDRVQGHGHGNQINGMK 369

Query: 453 ATGELLYTCGIDDTIKQVDLSSNAYSGP-EVKLGSQPRGLDIDENTLVTVTVKQISIVEN 511
               +LYT GIDDT++ VD+++N Y+    VKL SQPRGLDI  + +V VTV+QI++ ++
Sbjct: 370 TAKNILYTVGIDDTLRSVDITTNTYTETCVVKLDSQPRGLDIYNDIVVIVTVRQITVTQD 429

Query: 512 GAKVSSLPIDYEPSSISLDHEHGLVAVGG-ADSKVHIYELNNKSLSPKAELDHLGPVTDC 570
           G K+SS+PIDYEPSS+S++ E+G VAVG  +D+ +H+Y L+  +LSPK +L+HLG VTD 
Sbjct: 430 GRKISSVPIDYEPSSVSINQENGDVAVGATSDNSIHVYTLSGTNLSPKIQLEHLGSVTDV 489

Query: 571 SFSPSNEYLVASDAHRKVVLYRVPDFE-LAHNKEWGFHSAKVNCVAWSPDSALVASGSLD 629
           ++SP ++YLVA D +RKVVLY V +++ LAHN+EWGFH+A+VN VAW PDS +VASGSLD
Sbjct: 490 AYSPDSKYLVACDTNRKVVLYTVSEYKRLAHNREWGFHNARVNSVAWCPDSTMVASGSLD 549

Query: 630 TTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           TTIIIWS+ +PAKH IIKNAHPQSQITRL WLD + L+SVGQDCNTKIW I
Sbjct: 550 TTIIIWSVTNPAKHTIIKNAHPQSQITRLVWLDEETLISVGQDCNTKIWRI 600

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270011670|gb|EFA08118.1| hypothetical protein TcasGA2_TC005722 [Tribolium castaneum]

 Score =  936 bits (2420), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/656 (69%), Positives = 523/656 (79%), Gaps = 60/656 (9%)

Query: 31  GNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNV 90
            +K I+ATLPRTQRGQP+VLGGDPKGKNFLYTNGNSVIIRNI+NPAI+D+YTEHSC VNV
Sbjct: 4   ASKSIYATLPRTQRGQPLVLGGDPKGKNFLYTNGNSVIIRNIQNPAIADVYTEHSCPVNV 63

Query: 91  AKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVL 150
           AKYSPSGFYIASGD SGKVRIWDTVNKEHILKNEFHPIGGPIKDI               
Sbjct: 64  AKYSPSGFYIASGDQSGKVRIWDTVNKEHILKNEFHPIGGPIKDIA-------------- 109

Query: 151 SIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERF 210
                            W   N+  +                         VVGEGRERF
Sbjct: 110 -----------------WSPDNQRMV-------------------------VVGEGRERF 127

Query: 211 GHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE 270
           GHVFMSETGTSVGEISGQSKPINSCDFKP+RPFRIITGSEDNTIAVFEGPPFKFKMTKQE
Sbjct: 128 GHVFMSETGTSVGEISGQSKPINSCDFKPTRPFRIITGSEDNTIAVFEGPPFKFKMTKQE 187

Query: 271 HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQ 330
           HSRFVQAVRYSP+G+ FASAGFDGKVFLYDG S+DLV E+G+PAH GGVY V+W PDG Q
Sbjct: 188 HSRFVQAVRYSPTGNLFASAGFDGKVFLYDGTSSDLVGEVGSPAHSGGVYGVSWSPDGKQ 247

Query: 331 LLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN 390
           LLTASGDKT KLWD+ET+ VVSEF++G+ VEDQQVSCLWQ +YLLTVSLSGFI+YLD+N+
Sbjct: 248 LLTASGDKTAKLWDVETRQVVSEFVLGSTVEDQQVSCLWQNEYLLTVSLSGFINYLDIND 307

Query: 391 PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQING 450
           P+ P+RV+KGHNKPIT L LS DRGT+FTGSHDG +TRWNA+TGENDRV+G GHGNQING
Sbjct: 308 PTKPLRVVKGHNKPITVLELSEDRGTIFTGSHDGNVTRWNAETGENDRVEGVGHGNQING 367

Query: 451 MKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDI--DENTLVTVTVKQISI 508
           M+  G  LYTCGIDD++KQ+D+  N Y G ++KLGSQPRG+DI  ++N +VT +V +I++
Sbjct: 368 MRVHGGTLYTCGIDDSLKQIDIEGNTYKGQDLKLGSQPRGMDILKEQNVVVTASVNEITV 427

Query: 509 VENGAKVSSLPIDYEPSSISLDHEHGLVAVGGA-DSKVHIYELNNKSLSPKAELDHLGPV 567
            ++  K S+L + YEPSS+S+    G VAVGGA D+KVH+YEL    L P  ELDHLG V
Sbjct: 428 SQDNRKASTLKVSYEPSSVSVS-PRGHVAVGGAMDNKVHLYELKGTELVPLQELDHLGAV 486

Query: 568 TDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGS 627
           TD ++SP ++YLVA DAHRKVVLY VP+++LA N+EWGFH+A+VN VAWSPDS LVASGS
Sbjct: 487 TDVAYSPDDKYLVACDAHRKVVLYSVPEYKLATNQEWGFHNARVNSVAWSPDSLLVASGS 546

Query: 628 LDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIAPF 683
           LDT+IIIWS+  PAKHIIIKNAH QSQ+TRL WLD+  LVSVGQDCNTK+W I  F
Sbjct: 547 LDTSIIIWSVEKPAKHIIIKNAHAQSQVTRLAWLDDQTLVSVGQDCNTKLWTITKF 602

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350417914|ref|XP_003491642.1| PREDICTED: actin-interacting protein 1-like isoform 2 [Bombus impatiens]

 Score =  935 bits (2416), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/651 (69%), Positives = 526/651 (80%), Gaps = 59/651 (9%)

Query: 33  KYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAK 92
           KYIFATLPRTQRGQP+VLGGDPKGKNFLYTNGNSVIIRNI+NPAI+DIYTEHSC VNVAK
Sbjct: 6   KYIFATLPRTQRGQPLVLGGDPKGKNFLYTNGNSVIIRNIDNPAIADIYTEHSCPVNVAK 65

Query: 93  YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI 152
           YSPSGFYIASGD SGKVRIWDTVNKEHILKNEFHPIGGPIKDI                 
Sbjct: 66  YSPSGFYIASGDQSGKVRIWDTVNKEHILKNEFHPIGGPIKDIA---------------- 109

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
                          W   N+  +                         VVGEGRERFGH
Sbjct: 110 ---------------WSPDNQRMV-------------------------VVGEGRERFGH 129

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           VFM+ETGTSVGEISGQSKPINSCDF+P+RPFR+ITGSEDNTIAVFEGPPFKFKMTKQEH+
Sbjct: 130 VFMAETGTSVGEISGQSKPINSCDFRPARPFRLITGSEDNTIAVFEGPPFKFKMTKQEHT 189

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL 332
           RFVQAVRYSPSG+ FASAGFDGKVF+YDG S+DLV E+G+PAH+GGVY VAWKPDGTQLL
Sbjct: 190 RFVQAVRYSPSGNLFASAGFDGKVFIYDGTSSDLVGEVGSPAHQGGVYGVAWKPDGTQLL 249

Query: 333 TASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS 392
           TASGDKTCKLWD+ET+S+VSEF MG+ V+DQQVSCLWQ  +LL+VSLSGFI+YLDV NP+
Sbjct: 250 TASGDKTCKLWDVETRSLVSEFNMGSTVDDQQVSCLWQDKHLLSVSLSGFINYLDVANPT 309

Query: 393 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK 452
            P+R+IKGHNKPIT L LSPDRGT++TGSHDG+IT WNAKTG+NDRVQG GHGNQINGMK
Sbjct: 310 KPLRIIKGHNKPITVLTLSPDRGTIYTGSHDGYITNWNAKTGDNDRVQGHGHGNQINGMK 369

Query: 453 ATGELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDENTLVTVTVKQISIVEN 511
           AT  LLYT GIDDT++ VD+ +N Y+    VKL SQPRGLDI  +  V  TV+QI++ ++
Sbjct: 370 ATKNLLYTAGIDDTLRSVDIDTNTYTDTAIVKLDSQPRGLDIYTDLAVIATVRQITVTQD 429

Query: 512 GAKVSSLPIDYEPSSISLDHEHGLVAVGG-ADSKVHIYELNNKSLSPKAELDHLGPVTDC 570
           G KVS+  IDYEPS +S++ E+G VA+G  +D+ + IY L+  +L+PK EL+HLG VTD 
Sbjct: 430 GRKVSNTSIDYEPSCVSINQENGDVAIGATSDNMIRIYTLSGTNLTPKMELEHLGTVTDA 489

Query: 571 SFSPSNEYLVASDAHRKVVLYRVPDFE-LAHNKEWGFHSAKVNCVAWSPDSALVASGSLD 629
           ++SP ++YLVA D +RKVVLY VP+++ LAHN+EWGFH+A+VN VAW P+SA+VASGSLD
Sbjct: 490 AYSPDSKYLVACDTNRKVVLYTVPEYKRLAHNREWGFHNARVNSVAWCPNSAMVASGSLD 549

Query: 630 TTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           TTIIIWS+ +PAKH IIKNAHPQSQITRL WLD + L+SVGQDCNTKIW I
Sbjct: 550 TTIIIWSVTNPAKHTIIKNAHPQSQITRLVWLDEETLISVGQDCNTKIWRI 600

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91088693|ref|XP_975005.1| PREDICTED: similar to wd-repeat protein [Tribolium castaneum]

 Score =  934 bits (2415), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/652 (69%), Positives = 521/652 (79%), Gaps = 60/652 (9%)

Query: 35  IFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYS 94
           I+ATLPRTQRGQP+VLGGDPKGKNFLYTNGNSVIIRNI+NPAI+D+YTEHSC VNVAKYS
Sbjct: 19  IYATLPRTQRGQPLVLGGDPKGKNFLYTNGNSVIIRNIQNPAIADVYTEHSCPVNVAKYS 78

Query: 95  PSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF 154
           PSGFYIASGD SGKVRIWDTVNKEHILKNEFHPIGGPIKDI                   
Sbjct: 79  PSGFYIASGDQSGKVRIWDTVNKEHILKNEFHPIGGPIKDIA------------------ 120

Query: 155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF 214
                        W   N+  +                         VVGEGRERFGHVF
Sbjct: 121 -------------WSPDNQRMV-------------------------VVGEGRERFGHVF 142

Query: 215 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF 274
           MSETGTSVGEISGQSKPINSCDFKP+RPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF
Sbjct: 143 MSETGTSVGEISGQSKPINSCDFKPTRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF 202

Query: 275 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA 334
           VQAVRYSP+G+ FASAGFDGKVFLYDG S+DLV E+G+PAH GGVY V+W PDG QLLTA
Sbjct: 203 VQAVRYSPTGNLFASAGFDGKVFLYDGTSSDLVGEVGSPAHSGGVYGVSWSPDGKQLLTA 262

Query: 335 SGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTP 394
           SGDKT KLWD+ET+ VVSEF++G+ VEDQQVSCLWQ +YLLTVSLSGFI+YLD+N+P+ P
Sbjct: 263 SGDKTAKLWDVETRQVVSEFVLGSTVEDQQVSCLWQNEYLLTVSLSGFINYLDINDPTKP 322

Query: 395 IRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT 454
           +RV+KGHNKPIT L LS DRGT+FTGSHDG +TRWNA+TGENDRV+G GHGNQINGM+  
Sbjct: 323 LRVVKGHNKPITVLELSEDRGTIFTGSHDGNVTRWNAETGENDRVEGVGHGNQINGMRVH 382

Query: 455 GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDI--DENTLVTVTVKQISIVENG 512
           G  LYTCGIDD++KQ+D+  N Y G ++KLGSQPRG+DI  ++N +VT +V +I++ ++ 
Sbjct: 383 GGTLYTCGIDDSLKQIDIEGNTYKGQDLKLGSQPRGMDILKEQNVVVTASVNEITVSQDN 442

Query: 513 AKVSSLPIDYEPSSISLDHEHGLVAVGGA-DSKVHIYELNNKSLSPKAELDHLGPVTDCS 571
            K S+L + YEPSS+S+    G VAVGGA D+KVH+YEL    L P  ELDHLG VTD +
Sbjct: 443 RKASTLKVSYEPSSVSVS-PRGHVAVGGAMDNKVHLYELKGTELVPLQELDHLGAVTDVA 501

Query: 572 FSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTT 631
           +SP ++YLVA DAHRKVVLY VP+++LA N+EWGFH+A+VN VAWSPDS LVASGSLDT+
Sbjct: 502 YSPDDKYLVACDAHRKVVLYSVPEYKLATNQEWGFHNARVNSVAWSPDSLLVASGSLDTS 561

Query: 632 IIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIAPF 683
           IIIWS+  PAKHIIIKNAH QSQ+TRL WLD+  LVSVGQDCNTK+W I  F
Sbjct: 562 IIIWSVEKPAKHIIIKNAHAQSQVTRLAWLDDQTLVSVGQDCNTKLWTITKF 613

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715670|ref|XP_003396332.1| PREDICTED: actin-interacting protein 1-like isoform 2 [Bombus terrestris]

 Score =  934 bits (2414), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/651 (69%), Positives = 526/651 (80%), Gaps = 59/651 (9%)

Query: 33  KYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAK 92
           KYIFATLPRTQRGQP+VLGGDPKGKNFLYTNGNSVIIRNI+NPAI+DIYTEHSC VNVAK
Sbjct: 6   KYIFATLPRTQRGQPLVLGGDPKGKNFLYTNGNSVIIRNIDNPAIADIYTEHSCPVNVAK 65

Query: 93  YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI 152
           YSPSGFYIASGD SGKVRIWDTVNKEHILKNEFHPIGGPIKDI                 
Sbjct: 66  YSPSGFYIASGDQSGKVRIWDTVNKEHILKNEFHPIGGPIKDIA---------------- 109

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
                          W   N+  +                         VVGEGRERFGH
Sbjct: 110 ---------------WSPDNQRMV-------------------------VVGEGRERFGH 129

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           VFM+ETGTSVGEISGQSKPINSCDF+P+RPFR+ITGSEDNTIAVFEGPPFKFKMTKQEH+
Sbjct: 130 VFMAETGTSVGEISGQSKPINSCDFRPTRPFRLITGSEDNTIAVFEGPPFKFKMTKQEHT 189

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL 332
           RFVQAVRYSPSG+ FASAGFDGKVF+YDG S+DLV E+G+PAH+GGVY VAWKPDGTQLL
Sbjct: 190 RFVQAVRYSPSGNLFASAGFDGKVFIYDGTSSDLVGEVGSPAHQGGVYGVAWKPDGTQLL 249

Query: 333 TASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS 392
           TASGDKTCKLWD+ET+S+VSEF MG+ V+DQQVSCLWQ  +LL+VSLSGFI+YLD+ NP+
Sbjct: 250 TASGDKTCKLWDVETRSLVSEFNMGSTVDDQQVSCLWQDKHLLSVSLSGFINYLDIANPT 309

Query: 393 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK 452
            P+R+IKGHNKPIT L LSPDRGT++TGSHDG+IT WNAKTGENDRVQG GHGNQINGMK
Sbjct: 310 KPLRIIKGHNKPITVLTLSPDRGTIYTGSHDGYITNWNAKTGENDRVQGHGHGNQINGMK 369

Query: 453 ATGELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDENTLVTVTVKQISIVEN 511
           AT  LLYT GIDDT++ V++ +N Y+    VKL SQPRGLDI  +  V  TV+QI++ ++
Sbjct: 370 ATKNLLYTAGIDDTLRSVNIDTNTYTDTAIVKLDSQPRGLDIYTDLAVIATVRQITVTQD 429

Query: 512 GAKVSSLPIDYEPSSISLDHEHGLVAVGG-ADSKVHIYELNNKSLSPKAELDHLGPVTDC 570
           G KVS+  IDYEPS +S++ E+G VA+G  +D+ + IY L+  +L+PK EL+HLG VTD 
Sbjct: 430 GRKVSNTSIDYEPSCVSINQENGDVAIGATSDNMIRIYTLSGTNLTPKMELEHLGTVTDA 489

Query: 571 SFSPSNEYLVASDAHRKVVLYRVPDFE-LAHNKEWGFHSAKVNCVAWSPDSALVASGSLD 629
           ++SP ++YLVA D +RKVVLY VP+++ LAHN+EWGFH+A+VN VAW P+SA+VASGSLD
Sbjct: 490 AYSPDSKYLVACDTNRKVVLYTVPEYKRLAHNREWGFHNARVNSVAWCPNSAMVASGSLD 549

Query: 630 TTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           TTIIIWS+ +PAKH IIKNAHPQSQITRL WLD + L+SVGQDCNTKIW I
Sbjct: 550 TTIIIWSVTNPAKHTIIKNAHPQSQITRLVWLDEETLISVGQDCNTKIWRI 600

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328790339|ref|XP_624088.2| PREDICTED: actin-interacting protein 1 [Apis mellifera]

 Score =  921 bits (2380), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/651 (68%), Positives = 525/651 (80%), Gaps = 59/651 (9%)

Query: 33  KYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAK 92
           KYIFATLP+TQRGQP+VLG DPKGKNFLYTNGNSVIIRNI+NPAI+DIYTEHSC VNVAK
Sbjct: 6   KYIFATLPKTQRGQPLVLGCDPKGKNFLYTNGNSVIIRNIDNPAIADIYTEHSCPVNVAK 65

Query: 93  YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI 152
           YSPSGFYIASGD SGK+RIWDTVNKEHILKNEFHPIGGPIKDI                 
Sbjct: 66  YSPSGFYIASGDQSGKIRIWDTVNKEHILKNEFHPIGGPIKDIA---------------- 109

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
                          W   N+  +                         VVGEGRERFGH
Sbjct: 110 ---------------WSFDNQRMV-------------------------VVGEGRERFGH 129

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           VFM+ETGTSVGEISGQSKPINSCDF+P+RPFR+ITGSEDNTIAVFEGPPFKFKMTKQEH+
Sbjct: 130 VFMAETGTSVGEISGQSKPINSCDFRPTRPFRLITGSEDNTIAVFEGPPFKFKMTKQEHT 189

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL 332
           RFVQAVRYSPSG+ FASAGFDGKVF+YDG ++DL+ E+G+PAH+GGVY VAWKPDG+QLL
Sbjct: 190 RFVQAVRYSPSGNLFASAGFDGKVFIYDGINSDLIGEIGSPAHQGGVYGVAWKPDGSQLL 249

Query: 333 TASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS 392
           TASGDKTCKLWDIET+S++SEF MG  V+DQQVSCLWQ  YLL+VSLSGFI+YLDV+NP+
Sbjct: 250 TASGDKTCKLWDIETRSLISEFNMGTTVDDQQVSCLWQEKYLLSVSLSGFINYLDVDNPT 309

Query: 393 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK 452
            P+R+IKGHNKPIT L LSPDR T++TGSHDG+IT WNAKTGEN+R+QG GHGNQINGMK
Sbjct: 310 KPLRIIKGHNKPITVLTLSPDRSTIYTGSHDGYITNWNAKTGENNRIQGHGHGNQINGMK 369

Query: 453 ATGELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDENTLVTVTVKQISIVEN 511
           AT  LLYT GIDDT++ VD+ +N Y+    VKL SQPRGLDI ++ +V  T++QI++ ++
Sbjct: 370 ATKNLLYTAGIDDTLRLVDIDTNMYTDTVIVKLDSQPRGLDIYKDIVVIATIRQITVTQD 429

Query: 512 GAKVSSLPIDYEPSSISLDHEHGLVAVGG-ADSKVHIYELNNKSLSPKAELDHLGPVTDC 570
           G K+S+  IDYEPS IS++ E+G +A+G  +D+ + IY L++ +L+ K EL HLGPVTD 
Sbjct: 430 GRKISNTSIDYEPSCISINQENGDIAIGATSDNMLRIYALSDTNLTLKMELQHLGPVTDV 489

Query: 571 SFSPSNEYLVASDAHRKVVLYRVPDFE-LAHNKEWGFHSAKVNCVAWSPDSALVASGSLD 629
           ++SP ++YLVA D +RKVVLY  P+++ LAHN+EWGFH+A+VN VAWSP+S +VASGSLD
Sbjct: 490 AYSPDSKYLVACDTNRKVVLYTCPEYKRLAHNREWGFHNARVNSVAWSPNSIMVASGSLD 549

Query: 630 TTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           TTIIIWS+ +PAKH IIKNAHPQSQITRL WLD + L+SVGQDCNTKIW I
Sbjct: 550 TTIIIWSVTNPAKHTIIKNAHPQSQITRLVWLDEETLISVGQDCNTKIWRI 600

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	683
FB|FBgn0260049	608	flr "flare" [Drosophila melano	0.841	0.945	0.666	2.9e-229
UNIPROTKB|O93277	609	WDR1 "WD repeat-containing pro	0.771	0.865	0.477	3.6e-176
UNIPROTKB|Q6PAX7	607	wdr1-b "WD repeat-containing p	0.841	0.947	0.477	5e-153
UNIPROTKB|Q9W7F2	607	wdr1-a "WD repeat-containing p	0.841	0.947	0.475	3.1e-151
UNIPROTKB|Q6DIF4	607	wdr1 "WD repeat-containing pro	0.841	0.947	0.473	2.8e-150
UNIPROTKB|Q2KJH4	606	WDR1 "WD repeat-containing pro	0.840	0.947	0.462	9.8e-146
RGD|1305789	606	Wdr1 "WD repeat domain 1" [Rat	0.768	0.866	0.481	2e-145
MGI|MGI:1337100	606	Wdr1 "WD repeat domain 1" [Mus	0.770	0.867	0.480	1.1e-144
UNIPROTKB|O75083	606	WDR1 "WD repeat-containing pro	0.768	0.866	0.473	2.1e-143
WB|WBGene00006810	611	unc-78 [Caenorhabditis elegans	0.773	0.864	0.452	2.3e-133

FB|FBgn0260049 flr "flare" [Drosophila melanogaster (taxid:7227)]

 Score = 2073 (734.8 bits), Expect = 2.9e-229, Sum P(2) = 2.9e-229
 Identities = 389/584 (66%), Positives = 466/584 (79%)

Query:   100 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS-IGFYIAS 158
             +   D  GK  ++   N   I++N  +P    I D+ T  S     N+   S  GFYIAS
Sbjct:    28 VLGADPKGKNFLYTNGNSV-IIRNIENPA---IADVYTEHSCAV--NVAKYSPSGFYIAS 81

Query:   159 GDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSET 218
             GD SGK+RIWDTVNKEH+LKNEF PI GPIKDI+WSPDNQR+V VGEGRERFGHVFMSET
Sbjct:    82 GDASGKIRIWDTVNKEHLLKNEFQPIAGPIKDISWSPDNQRIVAVGEGRERFGHVFMSET 141

Query:   219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAV 278
             GTSVGEISGQSK INS DF+P+RPFRI+TGSEDNTIAVFEGPPFKFKMTKQ+HSRFVQAV
Sbjct:   142 GTSVGEISGQSKSINSADFRPARPFRIVTGSEDNTIAVFEGPPFKFKMTKQDHSRFVQAV 201

Query:   279 RYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK 338
             RYSP G  FASAGFDGKVFLYDG S++LV E G+PAHKGGVYA+AWKPD TQLLT SGDK
Sbjct:   202 RYSPDGKFFASAGFDGKVFLYDGTSSELVGEFGSPAHKGGVYALAWKPDSTQLLTCSGDK 261

Query:   339 TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI 398
             TC+LW +E++ +VSEF+MG  V+DQQVSCLWQGD L+TVSLSG I+YL+V +PS P+RV+
Sbjct:   262 TCRLWTVESRELVSEFVMGTTVDDQQVSCLWQGDNLITVSLSGVITYLNVADPSKPLRVV 321

Query:   399 KGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELL 458
             KGHNKPIT L LS DR T++TGSHDG +T WN+ +G NDR+ G GHGNQING+ A G+ +
Sbjct:   322 KGHNKPITVLGLSDDRSTIYTGSHDGVVTNWNSGSGTNDRITGTGHGNQINGIAAWGDFV 381

Query:   459 YTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDI--DENTLVTVTVKQISIVENGAKVS 516
             YTCGIDD+++Q  +  N+Y+   VKL  QPRGL I  +EN +    +K++++V++  K+ 
Sbjct:   382 YTCGIDDSLRQFSVEGNSYTDYVVKLNCQPRGLAILRNENIIALACIKELTLVQDQKKIF 441

Query:   517 SLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSN 576
             SLPI YE SSI+++ +   VAVGG D K+HIY L    L PK ELDHLG VTD S+SP  
Sbjct:   442 SLPIKYEASSIAVNADTSDVAVGGDDQKLHIYTLKGGVLEPKVELDHLGAVTDVSYSPDL 501

Query:   577 EYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWS 636
             +YLVA DAHRKVVLY V +++ AHNKEWGFHSA+VN VAWSP+S LVASGSLDTTIIIWS
Sbjct:   502 KYLVACDAHRKVVLYSVEEYKPAHNKEWGFHSARVNTVAWSPNSLLVASGSLDTTIIIWS 561

Query:   637 LASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
             +A+PAKH IIKNAHPQSQITRL WLDN+ ++S GQDCNTK+W +
Sbjct:   562 VANPAKHTIIKNAHPQSQITRLVWLDNNTVISTGQDCNTKVWHV 605

GO:0030042 "actin filament depolymerization" evidence=ISS;IMP

GO:0003779 "actin binding" evidence=ISS

GO:0008154 "actin polymerization or depolymerization" evidence=ISS

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0035317 "imaginal disc-derived wing hair organization" evidence=IMP

GO:0045214 "sarcomere organization" evidence=IMP

UNIPROTKB|O93277 WDR1 "WD repeat-containing protein 1" [Gallus gallus (taxid:9031)]

 Score = 1345 (478.5 bits), Expect = 3.6e-176, Sum P(2) = 3.6e-176
 Identities = 257/538 (47%), Positives = 361/538 (67%)

Query:   153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
             GFYIASGD+SGK+RIWDT  KEH+LK E+ P  G IKD+AW+ D++R+ VVGEGRE+FG 
Sbjct:    72 GFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDLAWTEDSKRIAVVGEGREKFGA 131

Query:   213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
             VF+ ++G+SVGEI+G +K INS D K +RP+R+ TGS+DN  A FEGPPFKFK T  +H+
Sbjct:   132 VFLWDSGSSVGEITGHNKVINSVDIKQTRPYRLATGSDDNCAAFFEGPPFKFKFTLSDHT 191

Query:   273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN-PAHKGGVYAVAWKPDGTQL 331
             RFV  VR+SP G+ FA+A  DG++F+YDG + + V  LG   AH GG+YA++W PD +QL
Sbjct:   192 RFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGGGKAHDGGIYAISWSPDSSQL 251

Query:   332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
             L+ASGDKT K+WD+   SVVS F MG+ V DQQ+ CLWQ D+LL++SLSG+I+YLD NNP
Sbjct:   252 LSASGDKTAKIWDVGANSVVSTFNMGSNVLDQQLGCLWQKDHLLSLSLSGYINYLDKNNP 311

Query:   392 STPIRVIKGHNKPITALALSPDRGT--VFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN 449
               P+RVIKGH+K I  L +  + G   +++GS+DG I  W++ TGEND   G GH NQ++
Sbjct:   312 DKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSNDGHINYWDSDTGENDGFSGKGHTNQVS 371

Query:   450 GMKATGEL--LYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDENTL-VTVTVKQ 505
              M A  E+  L TC +DDT++  +LS   YSG + VK+  QP+ L +      V + + Q
Sbjct:   372 RM-AVDEMDQLVTCSMDDTVRYTNLSKRDYSGQDAVKMDVQPKCLAVGPGGYTVVLCIGQ 430

Query:   506 ISIVENGAKVSSLP-IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSL-SPKAELDH 563
             I ++++  K  ++  + YEP ++++    G VAVGG D  V +Y +   SL S    L+ 
Sbjct:   431 IVLMKDKKKCFAIDDLGYEPEAVAVHPGGGSVAVGGTDGNVRLYSIQGTSLKSDDKTLEA 490

Query:   564 LGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALV 623
              GPVTD ++S    +L   DA++ V ++ VPD  + HN  +G H AKV C+AWSPD+   
Sbjct:   491 KGPVTDLAYSHDGAFLAVCDANKVVTVFSVPDGYVEHNVFYGHH-AKVVCIAWSPDNEHF 549

Query:   624 ASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIA 681
             ASG +D  + +W+++ P   I I +AH    ++ L WLD   LV+   D + K W I+
Sbjct:   550 ASGGMDMMVYVWTVSDPETRIKIPDAHRLHHVSGLAWLDEHTLVTTSHDASVKEWSIS 607

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

UNIPROTKB|Q6PAX7 wdr1-b "WD repeat-containing protein 1-B" [Xenopus laevis (taxid:8355)]

 Score = 1402 (498.6 bits), Expect = 5.0e-153, Sum P(2) = 5.0e-153
 Identities = 281/589 (47%), Positives = 383/589 (65%)

Query:   100 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASG 159
             I +GD  G   ++ T  K  I++N  +P    I DI T  +   +      S GFYIASG
Sbjct:    22 IIAGDPKGNNFLY-TNGKSVIIRNIDNPA---IADIYTEHAHQVVVARYAPS-GFYIASG 76

Query:   160 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG 219
             D SGK+RIWDT  KEH+LK E+ P  G IKDIAW+ D++R+ VVGEGRE+FG VF+ +TG
Sbjct:    77 DTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGSVFLWDTG 136

Query:   220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVR 279
             +SVGEI G  K INS D K +RP+R++TGS+DN  A FEGPPFKFK T  +HSRFV  VR
Sbjct:   137 SSVGEIIGNIKVINSVDIKQTRPYRLVTGSDDNCCAFFEGPPFKFKFTMSDHSRFVNCVR 196

Query:   280 YSPSGSHFASAGFDGKVFLYDGASADLVSELG-NPAHKGGVYAVAWKPDGTQLLTASGDK 338
             +SP GS  ASAG DG++FLYDG + + V  LG + AH GG+YAV+W PDGTQLL+ASGDK
Sbjct:   197 FSPDGSRLASAGADGQIFLYDGKTGEKVCSLGGSKAHDGGIYAVSWSPDGTQLLSASGDK 256

Query:   339 TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI 398
             T K+WD+   S V+ F +G+ V DQQ+ CLWQ DYLL+VSLSG+I+YLD NNP+ P R+I
Sbjct:   257 TAKIWDVAANSAVTTFNLGSDVLDQQLGCLWQKDYLLSVSLSGYINYLDKNNPAKPFRII 316

Query:   399 KGHNKPITALAL--SPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGE 456
             KGHNK I  + +  S  R T++TGSHDG I  W+A+TGEN+   G GH NQ++ M   G 
Sbjct:   317 KGHNKSIQCMTVDKSDGRSTIYTGSHDGHINYWDAETGENNTFTGKGHTNQVSSMDLDGS 376

Query:   457 L-LYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDENT-LVTVTVKQISIVENGA 513
               L TC +DDT++  +L S  YS  E VK+  QP+ + +     +VTV + QI ++++  
Sbjct:   377 SQLITCSMDDTLRYTNLISKDYSSSESVKMDVQPKCVAVGSGGYVVTVCIGQIVLLKDKK 436

Query:   514 KVSSLP-IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE-LDHLGPVTDCS 571
             KV ++  +DYEP ++++    G V+VGGAD KVH+Y +   SL  + + L   G VTD +
Sbjct:   437 KVFAIDSLDYEPEAVAIHKGSGTVSVGGADGKVHLYSIQGNSLKDEGKTLPAKGAVTDLA 496

Query:   572 FSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTT 631
             +SP   +L  +DA++ V ++ V D    HN  +G H AK   VAWSPD+   AS  +D  
Sbjct:   497 YSPDGAFLAVTDANKVVTVFSVADGYSEHNSYYGHH-AKALSVAWSPDNEHFASSGMDMM 555

Query:   632 IIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
             + +W+L+ P   I + +AH    ++ L WLD + L +V  D   K W +
Sbjct:   556 VYVWTLSDPDTRIKMPDAHRLHHVSSLAWLDENTLATVSHDACVKQWTV 604

GO:0003779 "actin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005884 "actin filament" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0030043 "actin filament fragmentation" evidence=ISS

UNIPROTKB|Q9W7F2 wdr1-a "WD repeat-containing protein 1-A" [Xenopus laevis (taxid:8355)]

 Score = 1384 (492.3 bits), Expect = 3.1e-151, Sum P(2) = 3.1e-151
 Identities = 280/589 (47%), Positives = 380/589 (64%)

Query:   100 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASG 159
             I +GD  G   ++ T  K  I++N  +P    I DI T  +  ++      S GFYIASG
Sbjct:    22 ILAGDPKGNNFLY-TNGKSVIIRNIDNPA---IADIYTEHAHQAVVARYAPS-GFYIASG 76

Query:   160 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG 219
             D SGK+RIWDT  KEH+LK E+ P  G IKDIAW+ D++R+ VVGEGRE+F  VF+ +TG
Sbjct:    77 DTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFASVFLWDTG 136

Query:   220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVR 279
             +SVGEI+G  K INS D K +RP+R++TGS+DN  A  EGPPFKFK T  +HSRFV  VR
Sbjct:   137 SSVGEITGNIKVINSVDIKQTRPYRLVTGSDDNCCAFLEGPPFKFKFTMSDHSRFVNCVR 196

Query:   280 YSPSGSHFASAGFDGKVFLYDGASADLVSELG-NPAHKGGVYAVAWKPDGTQLLTASGDK 338
             +SP GS  ASAG DG++FLYDG + + V  LG + AH GG+YAV+W PDGTQLL+ASGDK
Sbjct:   197 FSPDGSKLASAGADGQIFLYDGKTGEKVCSLGGSKAHDGGIYAVSWSPDGTQLLSASGDK 256

Query:   339 TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI 398
             T K+WD+   S V+ F +G+ V DQQ+ CLWQ DYLL+VSLSG+I+YLD NNP+ P+RVI
Sbjct:   257 TTKIWDVAANSAVTTFNLGSDVLDQQLGCLWQKDYLLSVSLSGYINYLDKNNPARPLRVI 316

Query:   399 KGHNKPITALAL--SPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATG- 455
             KGHNK I  + +  S  R T++TGSHDG I  W+A+TGEND   G GH NQ++ M   G 
Sbjct:   317 KGHNKSIQCMTVNNSDGRSTIYTGSHDGHINYWDAETGENDTFTGKGHTNQVSSMDLDGC 376

Query:   456 ELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDENT-LVTVTVKQISIVENGA 513
               L TC +DDT++   L S  YS  E VK+  QP+ + +     +VTV + QI ++++  
Sbjct:   377 NQLITCSMDDTLRYTSLISKDYSSSESVKMDVQPKCVAVGSGGYVVTVCIGQIVLLKDKK 436

Query:   514 KVSSLP-IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE-LDHLGPVTDCS 571
             KV ++  +DYEP ++++    G VAVGGAD KVH+Y +   SL  + + L   G VTD +
Sbjct:   437 KVFAIDSLDYEPEAVAIHKGSGTVAVGGADGKVHLYSIQGNSLKDEGKTLPAKGAVTDLA 496

Query:   572 FSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTT 631
             +S    +L  +DA++ V ++ V D     N  +G H AK   VAWSPD+   AS  +D  
Sbjct:   497 YSHDGAFLAVTDANKVVTVFSVADGYSEKNSYYGHH-AKALSVAWSPDNEHFASSGMDMM 555

Query:   632 IIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
             + +W+L+ P   I + +AH    ++ L WLD   L +V  D   K W +
Sbjct:   556 VYVWTLSDPDTRIKMPDAHRLHHVSSLAWLDEHTLATVSHDACVKQWTV 604

GO:0003779 "actin binding" evidence=ISS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005884 "actin filament" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0030043 "actin filament fragmentation" evidence=IDA

UNIPROTKB|Q6DIF4 wdr1 "WD repeat-containing protein 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 1376 (489.4 bits), Expect = 2.8e-150, Sum P(2) = 2.8e-150
 Identities = 279/589 (47%), Positives = 378/589 (64%)

Query:   100 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASG 159
             I +GD  G   ++ T  K  I++N  +P    I DI T  +   +      S GFYIASG
Sbjct:    22 IITGDPKGNNFLY-TNGKSVIIRNIENPA---IADIYTEHAHPVVVARYAPS-GFYIASG 76

Query:   160 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG 219
             D SGK+RIWDT  KEH+LK E+ P  G IKDIAW+ D++R+ VVGEGRE+FG VF+ +TG
Sbjct:    77 DTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGSVFLWDTG 136

Query:   220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVR 279
             +SVGEISG  K INS D K +RP+R++TGS+DN  A FEGPPFKFK T  +HSRFV  VR
Sbjct:   137 SSVGEISGNIKVINSVDIKQTRPYRLVTGSDDNCCAFFEGPPFKFKFTMADHSRFVNCVR 196

Query:   280 YSPSGSHFASAGFDGKVFLYDGASADLVSELG-NPAHKGGVYAVAWKPDGTQLLTASGDK 338
             +SP GS  ASAG DG++FLYDG + + V  LG + AH GG+YAV+W  D TQLL+ASGDK
Sbjct:   197 FSPDGSRLASAGADGQIFLYDGKTGEKVGNLGGSKAHDGGIYAVSWSADSTQLLSASGDK 256

Query:   339 TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI 398
             T K+WD+   S V+ F +G +V DQQ+ CLWQ DYLL+VSLSG+I+YLD NNPS P+RVI
Sbjct:   257 TAKIWDVAANSAVTTFHLGTEVLDQQLGCLWQKDYLLSVSLSGYINYLDKNNPSRPLRVI 316

Query:   399 KGHNKPITALAL--SPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKA-TG 455
             KGHNK I  + +  S  R T++TGSHDG I  W+A+TGEND   G GH NQ++ M   + 
Sbjct:   317 KGHNKSIQCMTVHNSDGRSTIYTGSHDGHINYWDAETGENDTFTGKGHTNQVSRMDLDSS 376

Query:   456 ELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDENT-LVTVTVKQISIVENGA 513
               L TC +DDT++   L+S  YS  E VK+  QP+ + +     +VT+ + QI ++++  
Sbjct:   377 NQLITCSMDDTVRYTSLTSKDYSSSESVKMDVQPKCVAVGSGGYVVTLCIGQIVLLKDKK 436

Query:   514 KVSSLP-IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE-LDHLGPVTDCS 571
             KV ++  +DYEP ++++    G VAVGG D  VH+Y +   SL  + + L   G VTD +
Sbjct:   437 KVFAIDSLDYEPEAVAIHKGSGTVAVGGVDGNVHLYSIQGNSLKDEGKSLPVKGAVTDLA 496

Query:   572 FSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTT 631
             +S    +L  +DA++ V ++ V D     N  +G H AK   VAWSPD+   AS  +D  
Sbjct:   497 YSHDGAFLAVTDANKVVTVFNVADGYSEQNVYYGHH-AKAVSVAWSPDNEHFASSGMDMM 555

Query:   632 IIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
             + +W+L+ P   I I +AH    ++ L WLD   L +V  D   K W +
Sbjct:   556 VYVWTLSDPDARIKIPDAHRLHHVSSLAWLDEHTLATVSHDACVKQWTV 604

GO:0003779 "actin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005884 "actin filament" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0030043 "actin filament fragmentation" evidence=ISS

UNIPROTKB|Q2KJH4 WDR1 "WD repeat-containing protein 1" [Bos taurus (taxid:9913)]

 Score = 1336 (475.4 bits), Expect = 9.8e-146, Sum P(2) = 9.8e-146
 Identities = 274/592 (46%), Positives = 382/592 (64%)

Query:   100 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASG 159
             I  GD  G   ++ T  K  IL+N  +P    I DI T  +   +      S GFYIASG
Sbjct:    22 IVGGDPKGNSFLY-TNGKCVILRNIDNPA---IADIYTEHAHQVVVAKYAPS-GFYIASG 76

Query:   160 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG 219
             D+SGK+RIWDT  KEH+LK E+ P  G IKDIAW+ D++R+ VVGEGRE+FG VF+ ++G
Sbjct:    77 DVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDSG 136

Query:   220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVR 279
             +SVGEI+G +K INS D K SRP+R++TGS+DN  A FEGPPFKFK T  +H RFV  VR
Sbjct:   137 SSVGEITGHNKVINSVDIKQSRPYRLVTGSDDNCAAFFEGPPFKFKFTISDHGRFVNCVR 196

Query:   280 YSPSGSHFASAGFDGKVFLYDGASADLVSELG-NPAHKGGVYAVAWKPDGTQLLTASGDK 338
             +SP G+ FA+A  DG++F+YDG + + V  LG + AH GG+YA++W PD T LL+ASGDK
Sbjct:   197 FSPDGNRFATASADGQIFIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLLSASGDK 256

Query:   339 TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI 398
             T K+WD+   SVV+ F MG+ V DQQ+ CLWQ D+LL++SLSG+I+YLD NNPS P+RVI
Sbjct:   257 TSKIWDVNVNSVVNTFTMGSNVLDQQLGCLWQKDHLLSISLSGYINYLDKNNPSKPLRVI 316

Query:   399 KGHNKPITALALSPDRGT--VFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT-- 454
             KGH+K I  L +  + G   +++GSHDG I  W+++TGEND   G GH NQ++ M     
Sbjct:   317 KGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDSFAGKGHTNQVSRMTVDEH 376

Query:   455 GELLYTCGIDDTIKQVDLSSNAYSGPEV-KLGSQPRGLDIDENTL-VTVTVKQISIVENG 512
             G+L+ +C +DDT++  +L+   YSG  V KL  QP+ L +      V V + QI ++++ 
Sbjct:   377 GQLV-SCSMDDTVRYTNLTLRDYSGQGVVKLDVQPKCLAVGPGGYTVVVCIGQIVLLKDQ 435

Query:   513 AKVSSLPID-YEPSSISLDHEHG-LVAVGGADSKVHIYELNNKSLSPKAEL-DHLGPVTD 569
              K  S+    YEP  +++ H  G  VAVGGAD  V +Y +   +L  + +L +  GPVTD
Sbjct:   436 RKCFSIDNPGYEPEVVAV-HPGGETVAVGGADGNVRLYSILGTTLKDEGKLLEAKGPVTD 494

Query:   570 CSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLD 629
              +FS    +L   DA + V ++ V D    +N  +G H AK+ C+AWSPD+   ASG +D
Sbjct:   495 LAFSHDGAFLAVCDASKVVTVFSVADGYSENNVFYGHH-AKIVCLAWSPDNEHFASGGMD 553

Query:   630 TTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIA 681
               + +W+L+ P   + I++AH    ++ L WLD   LV+   D + K W IA
Sbjct:   554 MMVYVWTLSDPETRVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVKEWTIA 605

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

RGD|1305789 Wdr1 "WD repeat domain 1" [Rattus norvegicus (taxid:10116)]

 Score = 1326 (471.8 bits), Expect = 2.0e-145, Sum P(2) = 2.0e-145
 Identities = 259/538 (48%), Positives = 361/538 (67%)

Query:   153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
             GFYIASGDISGK+RIWDT  KEHILK E+ P  G IKDIAW+ D++R+ VVGEGRE+FG 
Sbjct:    70 GFYIASGDISGKLRIWDTTQKEHILKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGA 129

Query:   213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
             VF+ +TG+SVGEI+G +K INS D K +RP+R+ TGS+DN  A FEGPPFKFK T  +HS
Sbjct:   130 VFLWDTGSSVGEITGHNKVINSVDIKQNRPYRLATGSDDNCAAFFEGPPFKFKFTIGDHS 189

Query:   273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG-NPAHKGGVYAVAWKPDGTQL 331
             RFV  VR+SP G+ FA+A  DG++F+YDG + + V  LG + AH GG+YA++W PD T L
Sbjct:   190 RFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHL 249

Query:   332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
             L+ASGDKT K+WD+   SVVS F MG+ V DQQ+ CLWQ D+LL++SLSG+I+YLD NNP
Sbjct:   250 LSASGDKTSKIWDVNVNSVVSTFPMGSNVLDQQLGCLWQKDHLLSISLSGYINYLDKNNP 309

Query:   392 STPIRVIKGHNKPITALALSPDRGT--VFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN 449
             S P+RVIKGH+K I  L +  + G   +++GSHDG I  W+++TGEND   G GH NQ++
Sbjct:   310 SKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDSFSGKGHTNQVS 369

Query:   450 GMKA--TGELLYTCGIDDTIKQVDLSSNAYSGPEV-KLGSQPRGLDIDENTL-VTVTVKQ 505
              M    +G+L+ +C +DDT++  +L+   YSG  V KL  QP+ + +      V V + Q
Sbjct:   370 RMTVDESGQLV-SCSMDDTVRYTNLTLRDYSGQGVVKLDVQPKCVAVGPGGYTVVVCIGQ 428

Query:   506 ISIVENGAKVSSLPID-YEPSSISLDHEHG-LVAVGGADSKVHIYELNNKSLSPKAEL-D 562
             I ++++  K  S+    YEP  +++ H  G  VAVGG+D  V +Y +   +L  + +L +
Sbjct:   429 IVLLKDQKKCFSIDNPGYEPEVVAV-HPGGDTVAVGGSDGNVRVYSILGATLKDEGKLLE 487

Query:   563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
               GPVTD ++S    +L   DA + V ++ V D    +N  +G H AK+ C+AWSPD+  
Sbjct:   488 AKGPVTDLAYSHDGAFLAVCDASKVVTVFSVADGYSENNVFYGHH-AKIVCLAWSPDNEH 546

Query:   623 VASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
              ASG +D  + +W+L+ P   + I++AH    ++ L WLD   LV+   D + K W I
Sbjct:   547 FASGGMDMMVYVWTLSDPETKVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVKEWTI 604

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

MGI|MGI:1337100 Wdr1 "WD repeat domain 1" [Mus musculus (taxid:10090)]

 Score = 1324 (471.1 bits), Expect = 1.1e-144, Sum P(2) = 1.1e-144
 Identities = 258/537 (48%), Positives = 357/537 (66%)

Query:   153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
             GFYIASGDISGK+RIWDT  KEH+LK E+ P  G IKDIAW+ D++R+ VVGEGRE+FG 
Sbjct:    70 GFYIASGDISGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGA 129

Query:   213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
             VF+ +TG+SVGEI+G +K INS D K +RP+R+ TGS+DN  A FEGPPFKFK T  +HS
Sbjct:   130 VFLWDTGSSVGEITGHNKVINSVDIKQTRPYRLATGSDDNCAAFFEGPPFKFKFTIGDHS 189

Query:   273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG-NPAHKGGVYAVAWKPDGTQL 331
             RFV  VR+SP G+ FA+A  DG++F+YDG + + V  LG + AH GG+YA++W PD T L
Sbjct:   190 RFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGESKAHDGGIYAISWSPDSTHL 249

Query:   332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
             L+ASGDKT K+WD+   SVVS F MG+ V DQQ+ CLWQ D+LL++SLSG+I+YLD NNP
Sbjct:   250 LSASGDKTSKIWDVNVNSVVSTFPMGSNVLDQQLGCLWQKDHLLSISLSGYINYLDKNNP 309

Query:   392 STPIRVIKGHNKPITALALSPDRGT--VFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN 449
             S P+RVIKGH+K I  L +  + G   +++GSHDG I  W+++TGEND   G GH NQ++
Sbjct:   310 SKPLRVIKGHSKSIQCLTVHRNGGKSYIYSGSHDGHINYWDSETGENDSFSGKGHTNQVS 369

Query:   450 GMKAT-GELLYTCGIDDTIKQVDLSSNAYSGPEV-KLGSQPRGLDIDENTL-VTVTVKQI 506
              M     E L +C +DDT++  +L+   YSG  V KL  QP+ + +      V V + QI
Sbjct:   370 RMTVNESEQLVSCSMDDTVRYTNLTLRDYSGQGVVKLDVQPKCVAVGPGGYTVVVCIGQI 429

Query:   507 SIVENGAKVSSLPID-YEPSSISLDHEHG-LVAVGGADSKVHIYELNNKSLSPKAEL-DH 563
              ++++  K  S+    YEP  +++ H  G  VAVGG D  V +Y +   +L  + +L + 
Sbjct:   430 VLLKDQKKCFSIDNPGYEPEVVAV-HPGGDTVAVGGTDGNVRVYSILASTLKDEGKLLEA 488

Query:   564 LGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALV 623
              GPVTD ++S    +L   DA + V ++ V D    +N  +G H AK+ C+AWSPD+   
Sbjct:   489 KGPVTDVAYSHDGAFLAVCDASKVVTVFSVADGYSENNVFYGHH-AKIVCLAWSPDNEHF 547

Query:   624 ASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
             ASG +D  + +W+L+ P   + I++AH    ++ L WLD   LV+   D + K W I
Sbjct:   548 ASGGMDMMVYVWTLSDPETKVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVKEWTI 604

GO:0003779 "actin binding" evidence=ISA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=ISA

GO:0015629 "actin cytoskeleton" evidence=ISA

UNIPROTKB|O75083 WDR1 "WD repeat-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 1308 (465.5 bits), Expect = 2.1e-143, Sum P(2) = 2.1e-143
 Identities = 255/538 (47%), Positives = 357/538 (66%)

Query:   153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
             GFYIASGD+SGK+RIWDT  KEH+LK E+ P  G IKDIAW+ D++R+ VVGEGRE+FG 
Sbjct:    70 GFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGA 129

Query:   213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
             VF+ ++G+SVGEI+G +K INS D K SRP+R+ TGS+DN  A FEGPPFKFK T  +HS
Sbjct:   130 VFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFTIGDHS 189

Query:   273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG-NPAHKGGVYAVAWKPDGTQL 331
             RFV  VR+SP G+ FA+A  DG++++YDG + + V  LG + AH GG+YA++W PD T L
Sbjct:   190 RFVNCVRFSPDGNRFATASADGQIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHL 249

Query:   332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
             L+ASGDKT K+WD+   SVVS F MG+ V DQQ+ CLWQ D+LL+VSLSG+I+YLD NNP
Sbjct:   250 LSASGDKTSKIWDVSVNSVVSTFPMGSTVLDQQLGCLWQKDHLLSVSLSGYINYLDRNNP 309

Query:   392 STPIRVIKGHNKPITALALSPDRGT--VFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN 449
             S P+ VIKGH+K I  L +  + G   +++GSHDG I  W+++TGEND   G GH NQ++
Sbjct:   310 SKPLHVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDSFAGKGHTNQVS 369

Query:   450 GMKA--TGELLYTCGIDDTIKQVDLSSNAYSGPEV-KLGSQPRGLDIDENTL-VTVTVKQ 505
              M    +G+L+ +C +DDT++   L    YSG  V KL  QP+ + +      V V + Q
Sbjct:   370 RMTVDESGQLI-SCSMDDTVRYTSLMLRDYSGQGVVKLDVQPKCVAVGPGGYAVVVCIGQ 428

Query:   506 ISIVENGAKVSSLPID-YEPSSISLDHEHG-LVAVGGADSKVHIYELNNKSLSPKAEL-D 562
             I ++++  K  S+    YEP  +++ H  G  VA+GG D  V +Y +   +L  + +L +
Sbjct:   429 IVLLKDQRKCFSIDNPGYEPEVVAV-HPGGDTVAIGGVDGNVRLYSILGTTLKDEGKLLE 487

Query:   563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
               GPVTD ++S    +L   DA + V ++ V D    +N  +G H AK+ C+AWSPD+  
Sbjct:   488 AKGPVTDVAYSHDGAFLAVCDASKVVTVFSVADGYSENNVFYGHH-AKIVCLAWSPDNEH 546

Query:   623 VASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
              ASG +D  + +W+L+ P   + I++AH    ++ L WLD   LV+   D + K W I
Sbjct:   547 FASGGMDMMVYVWTLSDPETRVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVKEWTI 604

GO:0003779 "actin binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=TAS

GO:0002576 "platelet degranulation" evidence=TAS

GO:0005576 "extracellular region" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

GO:0030168 "platelet activation" evidence=TAS

WB|WBGene00006810 unc-78 [Caenorhabditis elegans (taxid:6239)]

 Score = 1247 (444.0 bits), Expect = 2.3e-133, Sum P(2) = 2.3e-133
 Identities = 246/544 (45%), Positives = 346/544 (63%)

Query:   153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
             G+Y ASGD+ G VRIWDT    HILK       GP+KDI+W  +++R+  VGEGRERFGH
Sbjct:    71 GYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 130

Query:   213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
             VF+ +TGTS G ++GQ++ +NS DFKPSRPFRII+GS+DNT+A+FEGPPFKFK T  EH+
Sbjct:   131 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHT 190

Query:   273 RFVQAVRYSPSGSHFASAGFDGKVFLY---DGASADLVSE--LGNPAHKGGVYAVAWKPD 327
             +FV +VRY+P GS FAS G DG + LY   DG    +  +  L N AH G V+ + W PD
Sbjct:   191 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 250

Query:   328 GTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLD 387
             GT++ +AS DKT K+W++ T  V     +G ++EDQQ+  +W    L+++S +GFI++++
Sbjct:   251 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 310

Query:   388 VNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQ 447
                 S   +V  GHNK ITAL+ S D  T+F+   +G I  W+  TG ++RV    H   
Sbjct:   311 PELGSID-QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATM 369

Query:   448 INGMKATGEL-LYTCGIDDTIKQVDLSSNAYSGPEV---KLGSQPRGLDI--DENTLVTV 501
             I G+K T +  L+T   DD +K V    +     +    KL SQP GL +  D +  V  
Sbjct:   370 ITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAA 429

Query:   502 TVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL 561
               K I+I  +G K++ +PI Y  S ++L ++   VAVGG DSKVH+Y+L+  S+S    +
Sbjct:   430 CYKHIAIYSHG-KLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTI 488

Query:   562 DHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPD-FELAHNKEWGFHSAKVNCVAWSPDS 620
              H   +T  +FS +  +LVA+D  RKV+ Y V + FELAH   W FH+AKV CV+WSPD+
Sbjct:   489 VHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDN 548

Query:   621 ALVASGSLDTTIIIWSLASPAKH-IIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWE 679
               +A+GSLD ++I+W++  P+ H IIIK AH  S +  + WL+   +VS GQD N K W 
Sbjct:   549 VRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 608

Query:   680 IAPF 683
             + PF
Sbjct:   609 V-PF 611

GO:0018991 "oviposition" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040017 "positive regulation of locomotion" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0030163 "protein catabolic process" evidence=IMP

GO:0030240 "skeletal muscle thin filament assembly" evidence=IMP

GO:0040012 "regulation of locomotion" evidence=IGI;IMP

GO:0030836 "positive regulation of actin filament depolymerization" evidence=IDA

GO:0030837 "negative regulation of actin filament polymerization" evidence=IDA

GO:0051016 "barbed-end actin filament capping" evidence=ISS

GO:0016528 "sarcoplasm" evidence=IDA

GO:0042643 "actomyosin, actin part" evidence=IDA

GO:0003779 "actin binding" evidence=ISS

GO:0051015 "actin filament binding" evidence=IDA

GO:0030016 "myofibril" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O75083	WDR1_HUMAN	No assigned EC number	0.4261	0.8638	0.9735	yes	N/A
Q6DIF4	WDR1_XENTR	No assigned EC number	0.4573	0.8653	0.9736	yes	N/A
Q9VU68	WDR1_DROME	No assigned EC number	0.6451	0.8682	0.9753	yes	N/A
O93277	WDR1_CHICK	No assigned EC number	0.4223	0.8623	0.9671	yes	N/A
Q11176	WDR1_CAEEL	No assigned EC number	0.4154	0.8638	0.9656	yes	N/A
P46680	AIP1_YEAST	No assigned EC number	0.3195	0.7349	0.8162	yes	N/A
O14301	YE85_SCHPO	No assigned EC number	0.3415	0.8535	0.9798	yes	N/A
Q2KJH4	WDR1_BOVIN	No assigned EC number	0.4316	0.8653	0.9752	yes	N/A
Q5RKI0	WDR1_RAT	No assigned EC number	0.4337	0.8638	0.9735	yes	N/A
O88342	WDR1_MOUSE	No assigned EC number	0.4329	0.8653	0.9752	yes	N/A
P54686	WD42_DICDI	No assigned EC number	0.3847	0.8565	0.9798	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	683
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	8e-50
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-39
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-37
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-35
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	7e-35
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	7e-32
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-30
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-28
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	6e-16
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-14
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	1e-07
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	2e-07
smart00320	40	smart00320, WD40, WD40 repeats	6e-07
smart00320	40	smart00320, WD40, WD40 repeats	1e-06
smart00320	40	smart00320, WD40, WD40 repeats	3e-06
PLN00181	793	PLN00181, PLN00181, protein SPA1-RELATED; Provisio	5e-06
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	8e-06
PTZ00421	493	PTZ00421, PTZ00421, coronin; Provisional	3e-05
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-05
smart00320	40	smart00320, WD40, WD40 repeats	5e-05
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	1e-04
smart00320	40	smart00320, WD40, WD40 repeats	1e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	5e-04

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  175 bits (445), Expect = 8e-50
 Identities = 81/279 (29%), Positives = 137/279 (49%), Gaps = 15/279 (5%)

Query: 155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF 214
            +A+G   G +++WD    E +   + H   GP++D+A S D   +       ++   ++
Sbjct: 23  LLATGSGDGTIKVWDLETGELLRTLKGHT--GPVRDVAASADGTYLASGSS--DKTIRLW 78

Query: 215 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF 274
             ETG  V  ++G +  ++S  F P     + + S D TI V++    K   T + H+ +
Sbjct: 79  DLETGECVRTLTGHTSYVSSVAFSPDGRI-LSSSSRDKTIKVWDVETGKCLTTLRGHTDW 137

Query: 275 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA 334
           V +V +SP G+  AS+  DG + L+D  +   V+ L    H G V +VA+ PDG +LL++
Sbjct: 138 VNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATL--TGHTGEVNSVAFSPDGEKLLSS 195

Query: 335 SGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDYLLTVSLSGFISYLDVNNP 391
           S D T KLWD+ T   +       +  +  V+ +     G  L + S  G I   D+   
Sbjct: 196 SSDGTIKLWDLSTGKCLGTL----RGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTG 251

Query: 392 STPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
              ++ + GH   +T+LA SPD   + +GS DG I  W+
Sbjct: 252 E-CVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  146 bits (371), Expect = 2e-39
 Identities = 72/258 (27%), Positives = 115/258 (44%), Gaps = 12/258 (4%)

Query: 221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRY 280
               + G +  +    F P     + TGS D TI V++    +   T + H+  V+ V  
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKL-LATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAA 59

Query: 281 SPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTC 340
           S  G++ AS   D  + L+D  + + V  L    H   V +VA+ PDG  L ++S DKT 
Sbjct: 60  SADGTYLASGSSDKTIRLWDLETGECVRTLT--GHTSYVSSVAFSPDGRILSSSSRDKTI 117

Query: 341 KLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD--YLLTVSLSGFISYLDVNNPSTPIRVI 398
           K+WD+ET   ++         D   S  +  D  ++ + S  G I   D+      +  +
Sbjct: 118 KVWDVETGKCLTTL---RGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGK-CVATL 173

Query: 399 KGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKA--TGE 456
            GH   + ++A SPD   + + S DG I  W+  TG+       GH N +N +     G 
Sbjct: 174 TGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLG-TLRGHENGVNSVAFSPDGY 232

Query: 457 LLYTCGIDDTIKQVDLSS 474
           LL +   D TI+  DL +
Sbjct: 233 LLASGSEDGTIRVWDLRT 250

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  140 bits (355), Expect = 3e-37
 Identities = 79/329 (24%), Positives = 129/329 (39%), Gaps = 54/329 (16%)

Query: 315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL 374
           H GGV  VA+ PDG  L T SGD T K+WD+ET  ++     G+    + V+    G YL
Sbjct: 8   HTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTL-KGHTGPVRDVAASADGTYL 66

Query: 375 LTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG 434
            + S    I   D+      +R + GH   ++++A SPD   + + S D  I  W+ +TG
Sbjct: 67  ASGSSDKTIRLWDLETGE-CVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG 125

Query: 435 ENDRVQGAGHGNQINGMKA--TGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLD 492
           +       GH + +N +     G  + +   D TIK  DL +                  
Sbjct: 126 KCLTTLR-GHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTG----------------- 167

Query: 493 IDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNN 552
                     V  ++                 +S++   +   +    +D  + +++L+ 
Sbjct: 168 --------KCVATLTGHTGEV-----------NSVAFSPDGEKLLSSSSDGTIKLWDLST 208

Query: 553 KSLSPKAELD-HLGPVTDCSFSPSNEYLVASDAHRKVVLYRV----PDFELAHNKEWGFH 607
                   L  H   V   +FSP    L +      + ++ +        L+       H
Sbjct: 209 GKC--LGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSG------H 260

Query: 608 SAKVNCVAWSPDSALVASGSLDTTIIIWS 636
           +  V  +AWSPD   +ASGS D TI IW 
Sbjct: 261 TNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  135 bits (342), Expect = 2e-35
 Identities = 66/292 (22%), Positives = 117/292 (40%), Gaps = 27/292 (9%)

Query: 57  KNFLYTNG--NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDT 114
              L T     ++ + ++E   +      H+  V     S  G Y+ASG     +R+WD 
Sbjct: 21  GKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDL 80

Query: 115 VNKE--HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVN 172
              E    L      +           S+    +      G  ++S      +++WD   
Sbjct: 81  ETGECVRTLTGHTSYV----------SSVAFSPD------GRILSSSSRDKTIKVWDVET 124

Query: 173 KEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPI 232
            +             +  +A+SPD     V    ++    ++   TG  V  ++G +  +
Sbjct: 125 GK--CLTTLRGHTDWVNSVAFSPDGT--FVASSSQDGTIKLWDLRTGKCVATLTGHTGEV 180

Query: 233 NSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF 292
           NS  F P    ++++ S D TI +++    K   T + H   V +V +SP G   AS   
Sbjct: 181 NSVAFSPDG-EKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSE 239

Query: 293 DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWD 344
           DG + ++D  + + V  L    H   V ++AW PDG +L + S D T ++WD
Sbjct: 240 DGTIRVWDLRTGECVQTL--SGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  138 bits (347), Expect = 7e-35
 Identities = 102/435 (23%), Positives = 188/435 (43%), Gaps = 19/435 (4%)

Query: 47  PIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDIS 106
            ++  G  +    L    +  ++   +    S +   H  ++    +SP G  + SG   
Sbjct: 29  SLLSLGSSESGILLLALLSDSLVSLPD--LSSLLLRGHEDSITSIAFSPDGELLLSGSSD 86

Query: 107 GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVR 166
           G +++WD  N E ++K+        +  +   LS     +IL+       AS  + G V+
Sbjct: 87  GTIKLWDLDNGEKLIKSLEGLHDSSVSKL--ALSSPDGNSILL-------ASSSLDGTVK 137

Query: 167 IWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS 226
           +WD ++    L          +  +A+SPD  +++  G   +    ++   TG  +  ++
Sbjct: 138 LWD-LSTPGKLIRTLEGHSESVTSLAFSPDG-KLLASGSSLDGTIKLWDLRTGKPLSTLA 195

Query: 227 GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSH 286
           G + P++S  F P     I +GS D TI +++    K   +            +SP GS 
Sbjct: 196 GHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSL 255

Query: 287 FASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIE 346
            AS   DG + L+D   +          H   V +VA+ PDG  L + S D T +LWD+E
Sbjct: 256 LASGSSDGTIRLWD-LRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLE 314

Query: 347 TKSVVSEF-IMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPI 405
           T  ++S   + G++     +S    G  L++         L       P++ ++GH+  +
Sbjct: 315 TGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHS-NV 373

Query: 406 TALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK--ATGELLYTCGI 463
            +++ SPD   V +GS DG +  W+  TG   R    GH +++  +     G+ L +   
Sbjct: 374 LSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLD-GHTSRVTSLDFSPDGKSLASGSS 432

Query: 464 DDTIKQVDLSSNAYS 478
           D+TI+  DL ++  S
Sbjct: 433 DNTIRLWDLKTSLKS 447

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  129 bits (323), Expect = 7e-32
 Identities = 109/429 (25%), Positives = 184/429 (42%), Gaps = 50/429 (11%)

Query: 261 PFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVY 320
           P    +  + H   + ++ +SP G    S   DG + L+D  + + + +     H   V 
Sbjct: 54  PDLSSLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVS 113

Query: 321 AVAWK-PDGTQLLTASG--DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTV 377
            +A   PDG  +L AS   D T KLWD+ T   +   + G+      ++    G  L + 
Sbjct: 114 KLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASG 173

Query: 378 S-LSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVF-TGSHDGFITRWNAKTGE 435
           S L G I   D+     P+  + GH  P+++LA SPD G +  +GS DG I  W+  TG+
Sbjct: 174 SSLDGTIKLWDLRT-GKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGK 232

Query: 436 NDRVQGAGH-GNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDID 494
             R   +GH  + ++     G LL +   D TI+  DL S                    
Sbjct: 233 LLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRS-------------------S 273

Query: 495 ENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKS 554
            + L T++    S+                 S++   +  L+A G +D  V +++L    
Sbjct: 274 SSLLRTLSGHSSSV----------------LSVAFSPDGKLLASGSSDGTVRLWDLETGK 317

Query: 555 L-SPKAELDHLGPVTDCSFSPSNEYLVASDAHRK-VVLYRVPDFELAHNKEWGFHSAKVN 612
           L S      H GPV+  SFSP    LV+  +    + L+ +   +     E     + V 
Sbjct: 318 LLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLE---GHSNVL 374

Query: 613 CVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQ 671
            V++SPD  +V+SGS D T+ +W L++ +  ++       S++T L +  D   L S   
Sbjct: 375 SVSFSPDGRVVSSGSTDGTVRLWDLSTGS--LLRNLDGHTSRVTSLDFSPDGKSLASGSS 432

Query: 672 DCNTKIWEI 680
           D   ++W++
Sbjct: 433 DNTIRLWDL 441

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  120 bits (302), Expect = 4e-30
 Identities = 64/290 (22%), Positives = 114/290 (39%), Gaps = 45/290 (15%)

Query: 394 PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK- 452
             R +KGH   +T +A SPD   + TGS DG I  W+ +TGE  R    GH   +  +  
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLR-TLKGHTGPVRDVAA 59

Query: 453 -ATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVEN 511
            A G  L +   D TI+  DL +                       + T+T     +   
Sbjct: 60  SADGTYLASGSSDKTIRLWDLETG--------------------ECVRTLTGHTSYV--- 96

Query: 512 GAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCS 571
                        SS++   +  +++    D  + ++++            H   V   +
Sbjct: 97  -------------SSVAFSPDGRILSSSSRDKTIKVWDVETGKCL-TTLRGHTDWVNSVA 142

Query: 572 FSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTT 631
           FSP   ++ +S     + L+ +   +         H+ +VN VA+SPD   + S S D T
Sbjct: 143 FSPDGTFVASSSQDGTIKLWDLRTGKCVATLT--GHTGEVNSVAFSPDGEKLLSSSSDGT 200

Query: 632 IIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEI 680
           I +W L++      ++  H    +  + +  D  LL S  +D   ++W++
Sbjct: 201 IKLWDLSTGKCLGTLR-GHENG-VNSVAFSPDGYLLASGSEDGTIRVWDL 248

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  118 bits (295), Expect = 3e-28
 Identities = 102/496 (20%), Positives = 189/496 (38%), Gaps = 77/496 (15%)

Query: 156 IASGDISGKVRIWDTVNKEHILKN-------EFHPIGGPIKDIAWSPDNQRMVVVGEGRE 208
                 S +  I         L +               I  IA+SPD + ++      +
Sbjct: 29  SLLSLGSSESGILLLALLSDSLVSLPDLSSLLLRGHEDSITSIAFSPDGELLLS--GSSD 86

Query: 209 RFGHVFMSETGTSVGEI--SGQSKPINSCDFK-PSRPFRIITGSE-DNTIAVFE-GPPFK 263
               ++  + G  + +         ++      P     ++  S  D T+ +++   P K
Sbjct: 87  GTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGK 146

Query: 264 FKMTKQEHSRFVQAVRYSPSGSHFASAG-FDGKVFLYDGASADLVSELGNPAHKGGVYAV 322
              T + HS  V ++ +SP G   AS    DG + L+D  +   +S L    H   V ++
Sbjct: 147 LIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAG--HTDPVSSL 204

Query: 323 AWKPDGT-QLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCL-WQGDYLLTVSLS 380
           A+ PDG   + + S D T +LWD+ T  ++   + G+   D  VS     G  L + S  
Sbjct: 205 AFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHS--DSVVSSFSPDGSLLASGSSD 262

Query: 381 GFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEN-DRV 439
           G I   D+ + S+ +R + GH+  + ++A SPD   + +GS DG +  W+ +TG+    +
Sbjct: 263 GTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSL 322

Query: 440 QGAGHGNQINGMKATGE---LLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDEN 496
              GH   ++ +  + +   L+     D TI+  DL +                      
Sbjct: 323 TLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTG--------------------- 361

Query: 497 TLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLS 556
                      +       + L + + P          +V+ G  D  V +++L+  SL 
Sbjct: 362 ---------KPLKTLEGHSNVLSVSFSPDGR-------VVSSGSTDGTVRLWDLSTGSLL 405

Query: 557 PKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAW 616
                 H   VT   FSP  + L +  +   + L+ +                 +  V++
Sbjct: 406 RN-LDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKT--------------SLKSVSF 450

Query: 617 SPDSALVASGSLDTTI 632
           SPD  ++AS S D ++
Sbjct: 451 SPDGKVLASKSSDLSV 466

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 80.5 bits (197), Expect = 6e-16
 Identities = 69/318 (21%), Positives = 125/318 (39%), Gaps = 39/318 (12%)

Query: 22  KGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIY 81
            GK      G+    ++L  +  G  ++  G   G   L+      ++R+          
Sbjct: 187 TGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRST--------L 238

Query: 82  TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSL 141
           + HS    V+ +SP G  +ASG   G +R+WD  +   +L+                   
Sbjct: 239 SGHS-DSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRT-------------LSGHS 284

Query: 142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMV 201
           +S+ ++     G  +ASG   G VR+WD    + +         GP+  +++SPD    +
Sbjct: 285 SSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSL-L 343

Query: 202 VVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP 261
           V G   +    ++   TG  +  + G S  + S  F P     + +GS D T+ +++   
Sbjct: 344 VSGGSDDGTIRLWDLRTGKPLKTLEGHS-NVLSVSFSPD-GRVVSSGSTDGTVRLWDLST 401

Query: 262 FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYA 321
                    H+  V ++ +SP G   AS   D  + L+D               K  + +
Sbjct: 402 GSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWD--------------LKTSLKS 447

Query: 322 VAWKPDGTQLLTASGDKT 339
           V++ PDG  L + S D +
Sbjct: 448 VSFSPDGKVLASKSSDLS 465

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 74.3 bits (183), Expect = 2e-14
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 5/122 (4%)

Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H G VT  +FSP  + L        + ++ +   EL      G H+  V  VA S D   
Sbjct: 8   HTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLR-TLKG-HTGPVRDVAASADGTY 65

Query: 623 VASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEIA 681
           +ASGS D TI +W L +      +   H  S ++ + +  D  +L S  +D   K+W++ 
Sbjct: 66  LASGSSDKTIRLWDLETGECVRTLT-GH-TSYVSSVAFSPDGRILSSSSRDKTIKVWDVE 123

Query: 682 PF 683
             
Sbjct: 124 TG 125

Length = 289

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 48.1 bits (115), Expect = 1e-07
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWD 344
            H G V +VA+ PDG  L + S D T ++WD
Sbjct: 9   GHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 47.0 bits (112), Expect = 2e-07
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 607 HSAKVNCVAWSPDSALVASGSLDTTIIIWS 636
           H+  V  VA+SPD  L+ASGS D T+ +W 
Sbjct: 10  HTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 45.8 bits (109), Expect = 6e-07
 Identities = 16/32 (50%), Positives = 19/32 (59%)

Query: 313 PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWD 344
             H G V +VA+ PDG  L + S D T KLWD
Sbjct: 9   KGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 607 HSAKVNCVAWSPDSALVASGSLDTTIIIWS 636
           H+  V  VA+SPD   +ASGS D TI +W 
Sbjct: 11  HTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 44.2 bits (105), Expect = 3e-06
 Identities = 15/40 (37%), Positives = 24/40 (60%)

Query: 391 PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
               ++ +KGH  P+T++A SPD   + +GS DG I  W+
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional

 Score = 49.3 bits (117), Expect = 5e-06
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 13/151 (8%)

Query: 285 SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW-KPDGTQLLTASGDKTCKLW 343
           S  AS+ F+G V ++D A + LV+E+    H+  V+++ +   D T L + S D + KLW
Sbjct: 546 SQVASSNFEGVVQVWDVARSQLVTEMKE--HEKRVWSIDYSSADPTLLASGSDDGSVKLW 603

Query: 344 DIETKSVVSEFIMGNQVEDQQVSCLW----QGDYLLTVSLSGFISYLDVNNPSTPIRVIK 399
            I     VS   +G       + C+      G  L   S    + Y D+ NP  P+  + 
Sbjct: 604 SINQG--VS---IGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMI 658

Query: 400 GHNKPITALALSPDRGTVFTGSHDGFITRWN 430
           GH+K ++ +    D  T+ + S D  +  W+
Sbjct: 659 GHSKTVSYVRFV-DSSTLVSSSTDNTLKLWD 688

Length = 793

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 42.7 bits (101), Expect = 8e-06
 Identities = 15/38 (39%), Positives = 24/38 (63%)

Query: 393 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
             +R +KGH  P+T++A SPD   + +GS DG +  W+
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional

 Score = 46.8 bits (111), Expect = 3e-05
 Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 20/167 (11%)

Query: 227 GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK-------QEHSRFVQAVR 279
           GQ  PI    F P  P ++ T SED TI  +  P               Q H++ V  V 
Sbjct: 73  GQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVS 132

Query: 280 YSPSGSH-FASAGFDGKVFLYD---GASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS 335
           + PS  +  ASAG D  V ++D   G + +++       H   + ++ W  DG+ L T S
Sbjct: 133 FHPSAMNVLASAGADMVVNVWDVERGKAVEVIK-----CHSDQITSLEWNLDGSLLCTTS 187

Query: 336 GDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW--QGDYLLTVSLS 380
            DK   + D    ++VS        + Q+  CLW  + D ++T+  S
Sbjct: 188 KDKKLNIIDPRDGTIVSSVEAHASAKSQR--CLWAKRKDLIITLGCS 232

Length = 493

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 4/133 (3%)

Query: 552 NKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKV 611
           +++ S   +   LGP  +     S     +      ++   +       +     H   +
Sbjct: 9   SENKSKLLKKSELGPSLNSLSLLSLGSSESGILLLALLSDSLVSLPDLSSLLLRGHEDSI 68

Query: 612 NCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDND----LLV 667
             +A+SPD  L+ SGS D TI +W L +  K I        S +++L     D    LL 
Sbjct: 69  TSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLA 128

Query: 668 SVGQDCNTKIWEI 680
           S   D   K+W++
Sbjct: 129 SSSLDGTVKLWDL 141

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 40.4 bits (95), Expect = 5e-05
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 261 PFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD 300
             +   T + H+  V +V +SP G + AS   DG + L+D
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 262 FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD 300
            K   T + H+  V +V +SP G+  AS   DG V ++D
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 80  IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWD 113
               H+  V    +SP G Y+ASG   G +++WD
Sbjct: 7   TLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 37.7 bits (88), Expect = 5e-04
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 80  IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWD 113
               H+  V    +SP G  +ASG   G VR+WD
Sbjct: 6   TLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	683
KOG0318|consensus	603		100.0
KOG0319|consensus	775		100.0
KOG0318|consensus	603		100.0
KOG0319|consensus	775		100.0
KOG0291|consensus	893		100.0
KOG0291|consensus	893		100.0
KOG0306|consensus	888		100.0
KOG0271|consensus	480		100.0
KOG0271|consensus	480		100.0
KOG0306|consensus	888		100.0
KOG1408|consensus	1080		100.0
KOG1408|consensus	1080		100.0
KOG1063|consensus	764		100.0
KOG1539|consensus	910		100.0
KOG2106|consensus	626		100.0
KOG0272|consensus	459		100.0
KOG0272|consensus	459		100.0
KOG0286|consensus	343		100.0
KOG0315|consensus	311		100.0
KOG0276|consensus	794		100.0
KOG1539|consensus	910		100.0
KOG0279|consensus	315		100.0
KOG0286|consensus	343		100.0
KOG1063|consensus	764		100.0
KOG0315|consensus	311		100.0
KOG0279|consensus	315		100.0
KOG0273|consensus	524		100.0
KOG0296|consensus	399		100.0
KOG0276|consensus	794		100.0
KOG0273|consensus	524		100.0
KOG2048|consensus	691		100.0
KOG2048|consensus	691		100.0
KOG0296|consensus	399		100.0
KOG0295|consensus	406		100.0
KOG2106|consensus	626		100.0
KOG0292|consensus	1202		100.0
KOG0645|consensus	312		100.0
KOG0292|consensus	1202		100.0
KOG0295|consensus	406		100.0
KOG0284|consensus	464		100.0
KOG0284|consensus	464		100.0
KOG0645|consensus	312		100.0
KOG0285|consensus	460		100.0
KOG0293|consensus	519		100.0
KOG0263|consensus	707		100.0
KOG0282|consensus	503		100.0
KOG0263|consensus	707		100.0
KOG0293|consensus	519		100.0
KOG0285|consensus	460		100.0
KOG0265|consensus	338		100.0
KOG0265|consensus	338		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0266|consensus	456		100.0
KOG0266|consensus	456		100.0
KOG0282|consensus	503		100.0
KOG0643|consensus	327		100.0
KOG0281|consensus	499		100.0
KOG0275|consensus	508		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0278|consensus	334		100.0
KOG0316|consensus	307		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0313|consensus	423		100.0
KOG0278|consensus	334		100.0
KOG0281|consensus	499		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0316|consensus	307		100.0
KOG0643|consensus	327		100.0
KOG1407|consensus	313		100.0
KOG0275|consensus	508		100.0
KOG0640|consensus	430		100.0
KOG0313|consensus	423		100.0
KOG1407|consensus	313		100.0
KOG1446|consensus	311		100.0
KOG0283|consensus	712		100.0
KOG0288|consensus	459		100.0
KOG0310|consensus	487		100.0
KOG0305|consensus	484		99.98
KOG0310|consensus	487		99.98
KOG0640|consensus	430		99.98
KOG0268|consensus	433		99.97
KOG1963|consensus	792		99.97
KOG0772|consensus	641		99.97
KOG0283|consensus	712		99.97
KOG0277|consensus	311		99.97
KOG0289|consensus	506		99.97
KOG0288|consensus	459		99.97
KOG0647|consensus	347		99.97
KOG0289|consensus	506		99.97
KOG0641|consensus	350		99.97
KOG0772|consensus	641		99.97
PTZ00421	493	coronin; Provisional	99.97
KOG0299|consensus	479		99.97
KOG0973|consensus	942		99.97
KOG0973|consensus	942		99.97
KOG0305|consensus	484		99.97
KOG1446|consensus	311		99.97
KOG0308|consensus	735		99.97
KOG0268|consensus	433		99.97
KOG1274|consensus	933		99.97
KOG0308|consensus	735		99.97
KOG2096|consensus	420		99.97
KOG1445|consensus	1012		99.97
KOG0277|consensus	311		99.97
KOG0300|consensus	481		99.97
PTZ00421	493	coronin; Provisional	99.96
KOG0274|consensus	537		99.96
KOG1036|consensus	323		99.96
KOG0299|consensus	479		99.96
KOG0274|consensus	537		99.96
KOG0300|consensus	481		99.96
KOG1538|consensus	1081		99.96
KOG0641|consensus	350		99.96
KOG0294|consensus	362		99.96
KOG1445|consensus	1012		99.96
KOG0639|consensus	705		99.96
KOG0647|consensus	347		99.96
KOG0294|consensus	362		99.96
PTZ00420	568	coronin; Provisional	99.96
KOG0639|consensus	705		99.96
PTZ00420	568	coronin; Provisional	99.96
KOG1963|consensus	792		99.95
KOG2096|consensus	420		99.95
KOG4283|consensus	397		99.95
KOG0301|consensus	745		99.95
KOG0646|consensus	476		99.95
KOG1036|consensus	323		99.95
KOG0646|consensus	476		99.95
KOG2055|consensus	514		99.95
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.95
KOG0301|consensus	745		99.95
KOG2055|consensus	514		99.95
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.95
KOG1332|consensus	299		99.95
KOG1332|consensus	299		99.94
KOG0650|consensus	733		99.94
KOG0264|consensus	422		99.94
KOG1538|consensus	1081		99.94
KOG1274|consensus	933		99.94
KOG4283|consensus	397		99.94
KOG0321|consensus	720		99.93
KOG1273|consensus	405		99.93
KOG0264|consensus	422		99.93
KOG0269|consensus	839		99.93
KOG1273|consensus	405		99.93
KOG4328|consensus	498		99.93
KOG0269|consensus	839		99.93
KOG1912|consensus	1062		99.92
KOG1524|consensus	737		99.92
KOG0650|consensus	733		99.92
KOG0321|consensus	720		99.92
KOG4378|consensus	673		99.92
KOG2445|consensus	361		99.92
KOG4378|consensus	673		99.91
KOG2445|consensus	361		99.91
KOG1034|consensus	385		99.91
KOG0267|consensus	825		99.91
KOG4497|consensus	447		99.9
KOG4328|consensus	498		99.9
KOG0302|consensus	440		99.9
KOG0307|consensus	1049		99.9
KOG0267|consensus	825		99.89
KOG1009|consensus	434		99.89
COG2319	466	FOG: WD40 repeat [General function prediction only	99.89
KOG0270|consensus	463		99.89
COG2319	466	FOG: WD40 repeat [General function prediction only	99.89
KOG2919|consensus	406		99.89
KOG4497|consensus	447		99.88
KOG0302|consensus	440		99.88
KOG1009|consensus	434		99.88
KOG1034|consensus	385		99.88
KOG0307|consensus	1049		99.87
KOG0270|consensus	463		99.87
KOG2919|consensus	406		99.87
KOG2110|consensus	391		99.87
KOG0322|consensus	323		99.87
KOG0322|consensus	323		99.86
KOG1188|consensus	376		99.86
KOG0303|consensus	472		99.84
PRK11028	330	6-phosphogluconolactonase; Provisional	99.84
KOG1007|consensus	370		99.84
KOG1517|consensus	1387		99.84
KOG0642|consensus	577		99.84
KOG1912|consensus	1062		99.84
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.84
KOG4227|consensus	609		99.83
PRK11028	330	6-phosphogluconolactonase; Provisional	99.83
KOG1188|consensus	376		99.83
KOG0303|consensus	472		99.83
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.83
KOG1524|consensus	737		99.82
KOG4227|consensus	609		99.82
KOG0649|consensus	325		99.82
KOG1007|consensus	370		99.82
KOG1587|consensus	555		99.82
KOG1517|consensus	1387		99.81
KOG2110|consensus	391		99.81
KOG0771|consensus	398		99.8
KOG0649|consensus	325		99.8
KOG0644|consensus	1113		99.79
KOG1240|consensus	1431		99.79
KOG0642|consensus	577		99.79
KOG0290|consensus	364		99.79
KOG1240|consensus	1431		99.79
PRK01742	429	tolB translocation protein TolB; Provisional	99.79
KOG0644|consensus	1113		99.78
KOG2041|consensus	1189		99.78
KOG0771|consensus	398		99.78
KOG1587|consensus	555		99.78
KOG1523|consensus	361		99.78
KOG0974|consensus	967		99.77
KOG2111|consensus	346		99.77
KOG0290|consensus	364		99.76
KOG1523|consensus	361		99.76
PRK01742	429	tolB translocation protein TolB; Provisional	99.75
KOG2139|consensus	445		99.74
KOG1334|consensus	559		99.74
KOG1334|consensus	559		99.74
KOG2394|consensus	636		99.74
KOG1310|consensus	758		99.74
KOG2111|consensus	346		99.73
KOG2139|consensus	445		99.73
KOG2394|consensus	636		99.73
COG4946	668	Uncharacterized protein related to the periplasmic	99.71
KOG2321|consensus	703		99.71
PRK03629	429	tolB translocation protein TolB; Provisional	99.71
KOG1272|consensus	545		99.71
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.7
KOG2315|consensus	566		99.7
KOG2315|consensus	566		99.7
KOG2321|consensus	703		99.69
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.68
PRK04922	433	tolB translocation protein TolB; Provisional	99.68
PRK02889	427	tolB translocation protein TolB; Provisional	99.67
KOG1272|consensus	545		99.67
KOG2314|consensus	698		99.66
PRK05137	435	tolB translocation protein TolB; Provisional	99.66
KOG2041|consensus	1189		99.65
KOG1409|consensus	404		99.64
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.64
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.64
KOG1310|consensus	758		99.64
KOG2314|consensus	698		99.64
KOG0974|consensus	967		99.64
KOG3881|consensus	412		99.63
PRK04922	433	tolB translocation protein TolB; Provisional	99.63
PRK03629	429	tolB translocation protein TolB; Provisional	99.63
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.61
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.61
PRK02889	427	tolB translocation protein TolB; Provisional	99.6
KOG1409|consensus	404		99.6
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.59
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.59
KOG1354|consensus	433		99.58
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.58
KOG3881|consensus	412		99.57
PRK01029	428	tolB translocation protein TolB; Provisional	99.56
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.56
PRK05137	435	tolB translocation protein TolB; Provisional	99.56
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.55
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.55
PRK04792	448	tolB translocation protein TolB; Provisional	99.55
PRK00178	430	tolB translocation protein TolB; Provisional	99.54
COG4946	668	Uncharacterized protein related to the periplasmic	99.53
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.51
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.47
PRK04792	448	tolB translocation protein TolB; Provisional	99.47
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.46
KOG1354|consensus	433		99.45
PRK01029	428	tolB translocation protein TolB; Provisional	99.44
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.39
KOG4547|consensus	541		99.39
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.38
PRK00178	430	tolB translocation protein TolB; Provisional	99.38
KOG4547|consensus	541		99.35
KOG4190|consensus	1034		99.29
KOG0280|consensus	339		99.27
KOG1064|consensus	2439		99.26
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.24
PRK04043	419	tolB translocation protein TolB; Provisional	99.23
KOG0309|consensus	1081		99.23
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.22
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	99.22
KOG3914|consensus	390		99.22
KOG1064|consensus	2439		99.21
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.19
KOG4532|consensus	344		99.18
KOG1897|consensus	1096		99.18
KOG4190|consensus	1034		99.18
KOG3914|consensus	390		99.17
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.17
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.16
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.15
KOG1897|consensus	1096		99.14
KOG0280|consensus	339		99.14
PRK04043	419	tolB translocation protein TolB; Provisional	99.13
KOG4714|consensus	319		99.13
KOG4532|consensus	344		99.1
KOG4649|consensus	354		99.09
KOG4649|consensus	354		99.09
KOG3617|consensus	1416		99.07
KOG4714|consensus	319		99.05
KOG0309|consensus	1081		99.02
KOG0882|consensus	558		99.02
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	99.02
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.99
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.94
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.9
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.9
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.89
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.88
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.88
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.87
KOG0882|consensus	558		98.84
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.83
PRK02888	635	nitrous-oxide reductase; Validated	98.83
KOG1920|consensus	1265		98.82
KOG1645|consensus	463		98.82
KOG3617|consensus	1416		98.82
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.79
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.78
KOG1920|consensus	1265		98.76
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.75
KOG2114|consensus	933		98.71
KOG1645|consensus	463		98.69
KOG1275|consensus	1118		98.67
KOG2695|consensus	425		98.67
PRK02888	635	nitrous-oxide reductase; Validated	98.65
KOG1832|consensus	1516		98.65
KOG2695|consensus	425		98.64
KOG1275|consensus	1118		98.64
KOG2114|consensus	933		98.62
KOG2066|consensus	846		98.6
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.58
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.57
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.55
KOG1832|consensus	1516		98.55
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.55
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.51
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.5
KOG3621|consensus	726		98.48
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.47
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.45
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.45
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.45
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.41
KOG3621|consensus	726		98.39
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.37
KOG2066|consensus	846		98.35
COG3391	381	Uncharacterized conserved protein [Function unknow	98.34
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.29
COG3391	381	Uncharacterized conserved protein [Function unknow	98.27
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	98.26
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	98.25
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	98.23
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.22
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.19
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.18
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.18
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.17
PRK13616	591	lipoprotein LpqB; Provisional	98.16
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.14
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.09
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.09
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	98.05
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	98.04
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	98.01
KOG1898|consensus	1205		97.98
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.97
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	97.97
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	97.93
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	97.87
KOG1008|consensus	783		97.82
PRK13616	591	lipoprotein LpqB; Provisional	97.82
KOG1008|consensus	783		97.81
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.77
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.76
KOG4640|consensus	665		97.69
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.68
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.65
KOG1898|consensus	1205		97.65
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	97.63
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.58
COG5276	370	Uncharacterized conserved protein [Function unknow	97.57
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.56
KOG4640|consensus	665		97.55
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.55
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	97.53
PRK10115	686	protease 2; Provisional	97.5
KOG4499|consensus	310		97.48
KOG2444|consensus	238		97.46
KOG2079|consensus	1206		97.36
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	97.35
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.35
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.35
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.26
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.26
KOG2395|consensus	644		97.2
KOG2079|consensus	1206		97.18
KOG4499|consensus	310		97.18
KOG4441|consensus	571		97.15
COG5276	370	Uncharacterized conserved protein [Function unknow	97.15
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.12
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	97.07
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.07
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.06
PHA02713	557	hypothetical protein; Provisional	97.01
KOG4441|consensus	571		97.0
KOG2395|consensus	644		96.98
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.97
COG3292	671	Predicted periplasmic ligand-binding sensor domain	96.96
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.94
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.93
PHA02713	557	hypothetical protein; Provisional	96.91
KOG2280|consensus	829		96.82
PRK13684	334	Ycf48-like protein; Provisional	96.75
KOG3630|consensus	1405		96.74
KOG2444|consensus	238		96.72
PF14727	418	PHTB1_N: PTHB1 N-terminus	96.62
PRK13684	334	Ycf48-like protein; Provisional	96.57
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	96.28
KOG3630|consensus	1405		96.23
PRK10115	686	protease 2; Provisional	96.2
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	96.18
PLN00033	398	photosystem II stability/assembly factor; Provisio	96.07
KOG3616|consensus	1636		95.98
KOG2280|consensus	829		95.91
COG3292	671	Predicted periplasmic ligand-binding sensor domain	95.83
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.76
PHA03098	534	kelch-like protein; Provisional	95.76
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	95.7
KOG2377|consensus	657		95.7
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	95.68
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.64
COG4590	733	ABC-type uncharacterized transport system, permeas	95.63
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	95.48
PHA02790	480	Kelch-like protein; Provisional	95.29
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	95.25
PF13449	326	Phytase-like: Esterase-like activity of phytase	95.08
PHA03098	534	kelch-like protein; Provisional	95.05
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	94.76
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.72
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	94.68
PHA02790	480	Kelch-like protein; Provisional	94.67
PF14727	418	PHTB1_N: PTHB1 N-terminus	94.63
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	94.58
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	94.55
PRK13614	573	lipoprotein LpqB; Provisional	94.48
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	94.45
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.39
KOG2247|consensus	615		94.38
KOG1896|consensus	1366		94.33
KOG2377|consensus	657		94.32
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	94.29
PF10395	670	Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an	94.28
COG5167	776	VID27 Protein involved in vacuole import and degra	94.21
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	94.19
PF14779	257	BBS1: Ciliary BBSome complex subunit 1	94.12
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	93.98
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	93.87
COG4590	733	ABC-type uncharacterized transport system, permeas	93.54
KOG1916|consensus	1283		93.51
PRK13615	557	lipoprotein LpqB; Provisional	93.38
PF11725	1774	AvrE: Pathogenicity factor; InterPro: IPR021085 Th	93.3
KOG1916|consensus	1283		93.18
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	93.15
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	93.05
PLN02153	341	epithiospecifier protein	93.03
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	92.82
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	92.81
PLN00033	398	photosystem II stability/assembly factor; Provisio	92.63
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	92.47
PF13449	326	Phytase-like: Esterase-like activity of phytase	92.14
COG5167	776	VID27 Protein involved in vacuole import and degra	92.1
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	91.76
KOG1983|consensus	993		91.74
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	91.61
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	91.55
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	91.46
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	91.39
KOG4460|consensus	741		91.38
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	91.35
COG1506	620	DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept	91.24
KOG2247|consensus	615		91.15
PRK13613	599	lipoprotein LpqB; Provisional	90.98
KOG0783|consensus	1267		90.85
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	90.1
PLN02193	470	nitrile-specifier protein	89.99
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	89.63
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	89.47
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	89.34
PLN02193	470	nitrile-specifier protein	89.24
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	89.16
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	88.74
KOG4659|consensus	1899		88.69
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	88.6
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	88.2
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	88.06
KOG4460|consensus	741		87.85
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	87.84

>KOG0318|consensus

Probab=100.00  E-value=6e-87  Score=592.12  Aligned_cols=593  Identities=58%  Similarity=1.002  Sum_probs=558.0

Q ss_pred             cccceeecCCCcccCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCE
Q psy15995         30 NGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKV  109 (683)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i  109 (683)
                      .++.++++.+|.+.|+....+..+|.|..++|++++.|.+-+++++.....+.+|..+++-..|||.|-|+|+|+..|+|
T Consensus         4 ~~lk~~~~~lPst~Rg~~~~ig~dpkgd~ilY~nGksv~ir~i~~~~~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~v   83 (603)
T KOG0318|consen    4 YELKETFASLPSTERGVPIIIGGDPKGDNILYTNGKSVIIRNIDNPASVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKV   83 (603)
T ss_pred             hhhhhhccCCCcccCCcceEeccCCCCCeEEEeCCCEEEEEECCCccceeeeccccceeEEEEeCCCceEEeecCCcCcE
Confidence            56788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCee
Q psy15995        110 RIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIK  189 (683)
Q Consensus       110 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~  189 (683)
                      ||||....                                                        +.+++.+++...++|.
T Consensus        84 RIWdtt~~--------------------------------------------------------~hiLKnef~v~aG~I~  107 (603)
T KOG0318|consen   84 RIWDTTQK--------------------------------------------------------EHILKNEFQVLAGPIK  107 (603)
T ss_pred             EEEeccCc--------------------------------------------------------ceeeeeeeeecccccc
Confidence            99997554                                                        2334556666679999


Q ss_pred             EEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc
Q psy15995        190 DIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ  269 (683)
Q Consensus       190 ~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~  269 (683)
                      .++|++|++++++++++++++++++.|++|..+.++.+|...|+++.|-|..+++++++++|++|.+|+-++.+...+++
T Consensus       108 Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r  187 (603)
T KOG0318|consen  108 DISWDFDSKRIAAVGEGRERFGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFR  187 (603)
T ss_pred             cceeCCCCcEEEEEecCccceeEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeeccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEecc-CCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCC
Q psy15995        270 EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG-NPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETK  348 (683)
Q Consensus       270 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  348 (683)
                      .|...|.|+.|+|||+++++++.||++.+||-.+++.+..+. ..+|++.|.+++|+||++.+++++.|.+++|||..+.
T Consensus       188 ~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~  267 (603)
T KOG0318|consen  188 EHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTN  267 (603)
T ss_pred             ccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeecc
Confidence            999999999999999999999999999999999999999987 4569999999999999999999999999999999999


Q ss_pred             ceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEE
Q psy15995        349 SVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITR  428 (683)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~  428 (683)
                      ++++++........+.+.+.+.++.|++.+.+|.+.+++...+. +...+.+|...|+++..+|++++|++|+.||.|.-
T Consensus       268 slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~-~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~  346 (603)
T KOG0318|consen  268 SLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPS-VLKVISGHNKSITALTVSPDGKTIYSGSYDGHINS  346 (603)
T ss_pred             ceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCC-hhheecccccceeEEEEcCCCCEEEeeccCceEEE
Confidence            99999999999999999999999999999999999999999977 88999999999999999999999999999999999


Q ss_pred             EcCCCCCcceeccCCCCcceeEEEEeC-CeEEEEEcCCeEEEEeCCCCcccCCc-eecCCCCceeeecCC--eEEEEEec
Q psy15995        429 WNAKTGENDRVQGAGHGNQINGMKATG-ELLYTCGIDDTIKQVDLSSNAYSGPE-VKLGSQPRGLDIDEN--TLVTVTVK  504 (683)
Q Consensus       429 w~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~d~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~  504 (683)
                      |+..++..-+.....|...|.++...+ +.+++++.|.++++.++..+.+.... ..++.+|..+....+  ..+..+..
T Consensus       347 W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~  426 (603)
T KOG0318|consen  347 WDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACIS  426 (603)
T ss_pred             EecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecC
Confidence            999999999888889999999999995 99999999999999999888877665 688899999988777  88899999


Q ss_pred             eEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcc-eeecCCcCeeEEEECCCCCEEEEEe
Q psy15995        505 QISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPK-AELDHLGPVTDCSFSPSNEYLVASD  583 (683)
Q Consensus       505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~  583 (683)
                      .+.++.........+..+.+.+++++|++..+++|+.|+.|++|.+....+..+ ....|.++|++++||||+.|||+++
T Consensus       427 ~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~D  506 (603)
T KOG0318|consen  427 DIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGD  506 (603)
T ss_pred             cEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEec
Confidence            999999999999999999999999999999999999999999999999876544 4456999999999999999999999


Q ss_pred             CCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEccC
Q psy15995        584 AHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDN  663 (683)
Q Consensus       584 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~  663 (683)
                      ..+.+.+||+.+.+. ....+..|.+.|++++|+|+..++|+|+-|.+|.||+++.+.....++.+|. ..|+.+.|.++
T Consensus       507 a~rkvv~yd~~s~~~-~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~iknAH~-~gVn~v~wlde  584 (603)
T KOG0318|consen  507 ASRKVVLYDVASREV-KTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIIIKNAHL-GGVNSVAWLDE  584 (603)
T ss_pred             cCCcEEEEEcccCce-ecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEeccccc-cCceeEEEecC
Confidence            999999999999888 5667777999999999999999999999999999999999999988888875 45999999999


Q ss_pred             CeEEEeeCCCcEEEEeec
Q psy15995        664 DLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       664 ~~l~s~~~d~~v~vw~~~  681 (683)
                      ..++++|.|.+|++|++.
T Consensus       585 ~tvvSsG~Da~iK~W~v~  602 (603)
T KOG0318|consen  585 STVVSSGQDANIKVWNVT  602 (603)
T ss_pred             ceEEeccCcceeEEeccc
Confidence            999999999999999986

>KOG0319|consensus

Probab=100.00  E-value=1.1e-63  Score=462.57  Aligned_cols=577  Identities=17%  Similarity=0.251  Sum_probs=484.9

Q ss_pred             EeeCCCCCeEEEecCCeEEEEeCCCCcc-cccc-cCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccc-c
Q psy15995         50 LGGDPKGKNFLYTNGNSVIIRNIENPAI-SDIY-TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF-H  126 (683)
Q Consensus        50 ~~~s~~~~~l~~~~~~~i~v~~~~~~~~-~~~~-~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~-~  126 (683)
                      ++||++|+.|++..++.|.+-|+.+++. +... ......|++++++||+++|++++..+.+++|++.+++.+...+. |
T Consensus        25 ~~~s~nG~~L~t~~~d~Vi~idv~t~~~~l~s~~~ed~d~ita~~l~~d~~~L~~a~rs~llrv~~L~tgk~irswKa~H  104 (775)
T KOG0319|consen   25 VAWSSNGQHLYTACGDRVIIIDVATGSIALPSGSNEDEDEITALALTPDEEVLVTASRSQLLRVWSLPTGKLIRSWKAIH  104 (775)
T ss_pred             eeECCCCCEEEEecCceEEEEEccCCceecccCCccchhhhheeeecCCccEEEEeeccceEEEEEcccchHhHhHhhcc
Confidence            6799999999999999999999999987 3332 24577899999999999999999999999999999998888776 5


Q ss_pred             cCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecC
Q psy15995        127 PIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEG  206 (683)
Q Consensus       127 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~  206 (683)
                      .              .++--++|.|.+..|++|+.|+.++|||+..+.+  ...+.+|++.|.++.|.|+-.+.+..++.
T Consensus       105 e--------------~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~--th~fkG~gGvVssl~F~~~~~~~lL~sg~  168 (775)
T KOG0319|consen  105 E--------------APVITMAFDPTGTLLATGGADGRVKVWDIKNGYC--THSFKGHGGVVSSLLFHPHWNRWLLASGA  168 (775)
T ss_pred             C--------------CCeEEEEEcCCCceEEeccccceEEEEEeeCCEE--EEEecCCCceEEEEEeCCccchhheeecC
Confidence            4              7889999999999999999999999999999874  46778889999999999998876666666


Q ss_pred             CceEEEEEEccCCCc-eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCC--
Q psy15995        207 RERFGHVFMSETGTS-VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPS--  283 (683)
Q Consensus       207 ~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~--  283 (683)
                      .+..+++|+.+.+.. +..+..|...|++++|.+++.. +++++.|..+.+||+.+.+....+.. ...+-++.+-++  
T Consensus       169 ~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~-~ls~~RDkvi~vwd~~~~~~l~~lp~-ye~~E~vv~l~~~~  246 (775)
T KOG0319|consen  169 TDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLE-LLSVGRDKVIIVWDLVQYKKLKTLPL-YESLESVVRLREEL  246 (775)
T ss_pred             CCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCce-EEEeccCcEEEEeehhhhhhhheech-hhheeeEEEechhc
Confidence            777789999996554 8889999999999999999885 99999999999999977776666553 344667777776  


Q ss_pred             ---CCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcc
Q psy15995        284 ---GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQV  360 (683)
Q Consensus       284 ---~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  360 (683)
                         +.++++++.+|.+++||.+++++......+. ...+..+...+....++..+.|..+.++|.++.+....+...+..
T Consensus       247 ~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~-~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndE  325 (775)
T KOG0319|consen  247 GGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSD-SEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDE  325 (775)
T ss_pred             CCcceEEEEecCCceEEEEecccchhhhhhccCC-chhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchh
Confidence               6799999999999999999999887776543 333777777776667777788899999999999888777655544


Q ss_pred             eeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcc---
Q psy15995        361 EDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEND---  437 (683)
Q Consensus       361 ~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~---  437 (683)
                      -......-|..+++++++..+.+++|+......  ..+.+|...|.++....+|-+|++|+.|.++++|.++.+...   
T Consensus       326 I~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c--~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~  403 (775)
T KOG0319|consen  326 ILDMKFLGPEESHLAVATNSPELRLYTLPTSYC--QIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLC  403 (775)
T ss_pred             heeeeecCCccceEEEEeCCCceEEEecCCCce--EEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhh
Confidence            433444446789999999999999998876444  488999999999997778889999999999999988443322   


Q ss_pred             eeccCCCCcceeEEEEe---CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCce
Q psy15995        438 RVQGAGHGNQINGMKAT---GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAK  514 (683)
Q Consensus       438 ~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (683)
                      .....+|.+.|.++..+   ...+++++.|.++++|++...+.......+.                           .+
T Consensus       404 ~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~---------------------------~~  456 (775)
T KOG0319|consen  404 VAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLT---------------------------CR  456 (775)
T ss_pred             hhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceeh---------------------------hh
Confidence            22336899999999987   6789999999999999998733211111110                           11


Q ss_pred             eeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECC
Q psy15995        515 VSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVP  594 (683)
Q Consensus       515 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~  594 (683)
                      .....|...|++++++|+.+++|+|+.|.+.++|+++...+. -...+|...|.++.|+|..+.|++++.|++|+||.+.
T Consensus       457 ~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~-~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is  535 (775)
T KOG0319|consen  457 YTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLL-GVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIS  535 (775)
T ss_pred             HHHHhhcccccceEecCCCceEEecccccceeeecccCceEE-EEeeCCccceEEEEeccccceeEeccCCceEEEEEec
Confidence            122347778999999999999999999999999999966655 3445799999999999999999999999999999999


Q ss_pred             CCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCCeEEEeeCCC
Q psy15995        595 DFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDC  673 (683)
Q Consensus       595 ~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~  673 (683)
                      ++.++..  +.||...|....|-.+|+.|++++.||.+++|++.++++...+..  |++.|+++.-+ ....++||+.||
T Consensus       536 ~fSClkT--~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~--H~DrvWaL~~~~~~~~~~tgg~Dg  611 (775)
T KOG0319|consen  536 TFSCLKT--FEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDA--HNDRVWALSVSPLLDMFVTGGGDG  611 (775)
T ss_pred             cceeeee--ecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhh--ccceeEEEeecCccceeEecCCCe
Confidence            9999854  455999999999999999999999999999999999999999976  89999999998 667999999999


Q ss_pred             cEEEEe
Q psy15995        674 NTKIWE  679 (683)
Q Consensus       674 ~v~vw~  679 (683)
                      .|.+|.
T Consensus       612 ~i~~wk  617 (775)
T KOG0319|consen  612 RIIFWK  617 (775)
T ss_pred             EEEEee
Confidence            999995

>KOG0318|consensus

Probab=100.00  E-value=9.3e-56  Score=393.65  Aligned_cols=572  Identities=20%  Similarity=0.299  Sum_probs=448.7

Q ss_pred             eeeeccCCCCCCceeecCCCCCCceeeecccceeecCCCcc--------cCCCeEEEeeCCCCCeEEEe-cCCeEEEEeC
Q psy15995          2 IFATLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRT--------QRGQPIVLGGDPKGKNFLYT-NGNSVIIRNI   72 (683)
Q Consensus         2 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~   72 (683)
                      +||.||.+.+|+.+++.++++|..+++..+..-....+...        +....+...|||.|.|+|.+ ..|.|+|||.
T Consensus         9 ~~~~lPst~Rg~~~~ig~dpkgd~ilY~nGksv~ir~i~~~~~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdt   88 (603)
T KOG0318|consen    9 TFASLPSTERGVPIIIGGDPKGDNILYTNGKSVIIRNIDNPASVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDT   88 (603)
T ss_pred             hccCCCcccCCcceEeccCCCCCeEEEeCCCEEEEEECCCccceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEec
Confidence            58999999999999999999999999987766555554332        33455677899999999999 4789999998


Q ss_pred             CCCcc--cccccCcccceEEEEECCCCcEEEEecCC----CCEEEEeCCCcccccccccccCCCCcccceeeeeecceee
Q psy15995         73 ENPAI--SDIYTEHSCAVNVAKYSPSGFYIASGDIS----GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRN  146 (683)
Q Consensus        73 ~~~~~--~~~~~~h~~~v~~~~~s~d~~~las~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  146 (683)
                      ...+.  ...++--.++|..++|+.|+++|+..++.    |.+.+||  +|.-+-++.+|.              ..+++
T Consensus        89 t~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~D--SG~SvGei~GhS--------------r~ins  152 (603)
T KOG0318|consen   89 TQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWD--SGNSVGEITGHS--------------RRINS  152 (603)
T ss_pred             cCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEec--CCCccceeeccc--------------eeEee
Confidence            76443  23466678999999999999999876543    2356665  555566666665              77889


Q ss_pred             eEeeccc-eEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeee
Q psy15995        147 ILVLSIG-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEI  225 (683)
Q Consensus       147 ~~~s~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  225 (683)
                      +.|-|.. .++++|++|++|.+|+=..-+  .+..+..|...|.++.|+|||+++++++.++.  +.+++-.+|+.+.++
T Consensus       153 ~~~KpsRPfRi~T~sdDn~v~ffeGPPFK--Fk~s~r~HskFV~~VRysPDG~~Fat~gsDgk--i~iyDGktge~vg~l  228 (603)
T KOG0318|consen  153 VDFKPSRPFRIATGSDDNTVAFFEGPPFK--FKSSFREHSKFVNCVRYSPDGSRFATAGSDGK--IYIYDGKTGEKVGEL  228 (603)
T ss_pred             eeccCCCceEEEeccCCCeEEEeeCCCee--eeecccccccceeeEEECCCCCeEEEecCCcc--EEEEcCCCccEEEEe
Confidence            9998865 489999999999999865433  55667788899999999999999999998865  788999999999999


Q ss_pred             e---cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccc---cCeEEEEECCCCCEEEEEcCCCcEEEE
Q psy15995        226 S---GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS---RFVQAVRYSPSGSHFASAGFDGKVFLY  299 (683)
Q Consensus       226 ~---~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg~i~iw  299 (683)
                      .   +|.+.|.+++|+||+.. +++++.|.+++|||..+.+++.++....   +.-..+.|-  ...|++.+.+|.|.++
T Consensus       229 ~~~~aHkGsIfalsWsPDs~~-~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq--kd~lItVSl~G~in~l  305 (603)
T KOG0318|consen  229 EDSDAHKGSIFALSWSPDSTQ-FLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ--KDHLITVSLSGTINYL  305 (603)
T ss_pred             cCCCCccccEEEEEECCCCce-EEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe--CCeEEEEEcCcEEEEe
Confidence            8   89999999999999994 9999999999999999999888775332   223334454  5579999999999999


Q ss_pred             eCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEec
Q psy15995        300 DGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSL  379 (683)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  379 (683)
                      +...++.+..+..  |...|+++..+|++++|++++.||.|.-|+..++..-+.....+...+..+... ....+++.+.
T Consensus       306 n~~d~~~~~~i~G--HnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~-~~~~~~t~g~  382 (603)
T KOG0318|consen  306 NPSDPSVLKVISG--HNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAAS-ESGELFTIGW  382 (603)
T ss_pred             cccCCChhheecc--cccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeec-CCCcEEEEec
Confidence            9999998888876  999999999999999999999999999999998876544333343333333332 3367888889


Q ss_pred             CCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEE
Q psy15995        380 SGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLY  459 (683)
Q Consensus       380 ~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~  459 (683)
                      |.++++.++....-.....-.-.....+++..+++..++....++.+.+=|...-   ............++...++.++
T Consensus       383 Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~---~~~~~~y~~s~vAv~~~~~~va  459 (603)
T KOG0318|consen  383 DDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKV---SSIPIGYESSAVAVSPDGSEVA  459 (603)
T ss_pred             CCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcc---eeeccccccceEEEcCCCCEEE
Confidence            9999999886533222211112233348888888878877776665554444322   2222334555566666699999


Q ss_pred             EEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEE
Q psy15995        460 TCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVG  539 (683)
Q Consensus       460 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  539 (683)
                      .|+.|+.+.+|.+......                                  ......++..++++++++||+.+||++
T Consensus       460 VGG~Dgkvhvysl~g~~l~----------------------------------ee~~~~~h~a~iT~vaySpd~~yla~~  505 (603)
T KOG0318|consen  460 VGGQDGKVHVYSLSGDELK----------------------------------EEAKLLEHRAAITDVAYSPDGAYLAAG  505 (603)
T ss_pred             EecccceEEEEEecCCccc----------------------------------ceeeeecccCCceEEEECCCCcEEEEe
Confidence            9999999999999876431                                  233445677899999999999999999


Q ss_pred             cCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCC
Q psy15995        540 GADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPD  619 (683)
Q Consensus       540 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d  619 (683)
                      ...+.+.+||+.+.+.....-.=|...|.+++|+|+..++|+|+-|..|.||+++.-... .....+|...|+.+.|- |
T Consensus       506 Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~-i~iknAH~~gVn~v~wl-d  583 (603)
T KOG0318|consen  506 DASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKH-IIIKNAHLGGVNSVAWL-D  583 (603)
T ss_pred             ccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhh-eEeccccccCceeEEEe-c
Confidence            999999999999988743322239999999999999999999999999999999865444 23333498899999998 5


Q ss_pred             CCeEEEeecCCcEEEEeCC
Q psy15995        620 SALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       620 ~~~l~~~~~d~~v~iw~~~  638 (683)
                      ...|++.+.|..|++|++.
T Consensus       584 e~tvvSsG~Da~iK~W~v~  602 (603)
T KOG0318|consen  584 ESTVVSSGQDANIKVWNVT  602 (603)
T ss_pred             CceEEeccCcceeEEeccc
Confidence            5679999999999999974

>KOG0319|consensus

Probab=100.00  E-value=8.5e-57  Score=416.99  Aligned_cols=570  Identities=18%  Similarity=0.247  Sum_probs=466.7

Q ss_pred             eccCCCCCCceeecCCCCCCceeeeccccee-ecCCCcccCCCeEEEeeCCCCCeEEEec-CCeEEEEeCCCCccccccc
Q psy15995          5 TLPRTQRGQPIVLGGDPKGKNFLYTNGNKYI-FATLPRTQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYT   82 (683)
Q Consensus         5 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~~~-~~~i~v~~~~~~~~~~~~~   82 (683)
                      ...++|+|+.|...-..  +........... ++......+..+++++++||+++|+++. +..+++|++++++.++.++
T Consensus        24 ~~~~s~nG~~L~t~~~d--~Vi~idv~t~~~~l~s~~~ed~d~ita~~l~~d~~~L~~a~rs~llrv~~L~tgk~irswK  101 (775)
T KOG0319|consen   24 PVAWSSNGQHLYTACGD--RVIIIDVATGSIALPSGSNEDEDEITALALTPDEEVLVTASRSQLLRVWSLPTGKLIRSWK  101 (775)
T ss_pred             ceeECCCCCEEEEecCc--eEEEEEccCCceecccCCccchhhhheeeecCCccEEEEeeccceEEEEEcccchHhHhHh
Confidence            35678888877764322  222222233333 5555666677899999999999999884 6789999999999999999


Q ss_pred             C-cccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccce--EEEee
Q psy15995         83 E-HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF--YIASG  159 (683)
Q Consensus        83 ~-h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~  159 (683)
                      . |++||.-++|+|.|..||+|+.|+.++|||+..+.+...+++++              ..|..+.|.|+..  .|++|
T Consensus       102 a~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~g--------------GvVssl~F~~~~~~~lL~sg  167 (775)
T KOG0319|consen  102 AIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHG--------------GVVSSLLFHPHWNRWLLASG  167 (775)
T ss_pred             hccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCC--------------ceEEEEEeCCccchhheeec
Confidence            8 99999999999999999999999999999999999999999887              7899999999876  58999


Q ss_pred             cCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeec
Q psy15995        160 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKP  239 (683)
Q Consensus       160 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  239 (683)
                      ..|+.+++||+.++.. ....+..|...|++++|++|+..+++++.++  .+.+|+...-+....++. ...+-++.+-+
T Consensus       168 ~~D~~v~vwnl~~~~t-cl~~~~~H~S~vtsL~~~~d~~~~ls~~RDk--vi~vwd~~~~~~l~~lp~-ye~~E~vv~l~  243 (775)
T KOG0319|consen  168 ATDGTVRVWNLNDKRT-CLHTMILHKSAVTSLAFSEDSLELLSVGRDK--VIIVWDLVQYKKLKTLPL-YESLESVVRLR  243 (775)
T ss_pred             CCCceEEEEEcccCch-HHHHHHhhhhheeeeeeccCCceEEEeccCc--EEEEeehhhhhhhheech-hhheeeEEEec
Confidence            9999999999997654 4466777889999999999999998888664  478888866555555443 33456666666


Q ss_pred             C-----CCeEEEEeeCCCeEEEEcCCCCceeeecccc-ccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC
Q psy15995        240 S-----RPFRIITGSEDNTIAVFEGPPFKFKMTKQEH-SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP  313 (683)
Q Consensus       240 ~-----~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~  313 (683)
                      +     +.+ +++.+.+|.+++||.++++........ ...+..+...+....++..+.|..+.++|.++.+....+-+ 
T Consensus       244 ~~~~~~~~~-~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG-  321 (775)
T KOG0319|consen  244 EELGGKGEY-IITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVG-  321 (775)
T ss_pred             hhcCCcceE-EEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcC-
Confidence            6     554 999999999999999988876655433 33466666666666677777799999999999999998876 


Q ss_pred             ccccCeEEEEE-ccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCC
Q psy15995        314 AHKGGVYAVAW-KPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS  392 (683)
Q Consensus       314 ~~~~~i~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~  392 (683)
                       ..+.|.+++| .|+.++|++++..+.+++++..+....  +..++......+....+|.++++++.|..+++|.+.+..
T Consensus       322 -~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~--ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~  398 (775)
T KOG0319|consen  322 -YNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ--IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNC  398 (775)
T ss_pred             -CchhheeeeecCCccceEEEEeCCCceEEEecCCCceE--EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCc
Confidence             7889999988 467789999999999999988877654  666777777777766778899999999999999884433


Q ss_pred             ---cceeeeeeccccEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCCccee--------ccCCCCcceeEEEEe--CCeE
Q psy15995        393 ---TPIRVIKGHNKPITALALSPDR-GTVFTGSHDGFITRWNAKTGENDRV--------QGAGHGNQINGMKAT--GELL  458 (683)
Q Consensus       393 ---~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~--------~~~~~~~~v~~~~~~--~~~l  458 (683)
                         .++....+|...|.+++++..+ ..+++++.|+++++|++...+....        ....|...|++++..  ..++
T Consensus       399 ~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLi  478 (775)
T KOG0319|consen  399 SKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLI  478 (775)
T ss_pred             chhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceE
Confidence               3456678899999999997755 6889999999999999987332211        224689999999887  7789


Q ss_pred             EEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeee-cCCCCCcEEEEccCCCEEE
Q psy15995        459 YTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSL-PIDYEPSSISLDHEHGLVA  537 (683)
Q Consensus       459 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~  537 (683)
                      ++|+.|++.++|++.....                                     ...+ .|...+.++.|+|..+.++
T Consensus       479 AT~SqDktaKiW~le~~~l-------------------------------------~~vLsGH~RGvw~V~Fs~~dq~la  521 (775)
T KOG0319|consen  479 ATGSQDKTAKIWDLEQLRL-------------------------------------LGVLSGHTRGVWCVSFSKNDQLLA  521 (775)
T ss_pred             EecccccceeeecccCceE-------------------------------------EEEeeCCccceEEEEeccccceeE
Confidence            9999999999999984321                                     1111 2566899999999999999


Q ss_pred             EEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEec
Q psy15995        538 VGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWS  617 (683)
Q Consensus       538 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s  617 (683)
                      +++.|++|+||.+.+......+ .+|...|..+.|-.+|+.|++++.||-+++|+++++++......  |...|.+++-+
T Consensus       522 T~SgD~TvKIW~is~fSClkT~-eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~--H~DrvWaL~~~  598 (775)
T KOG0319|consen  522 TCSGDKTVKIWSISTFSCLKTF-EGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDA--HNDRVWALSVS  598 (775)
T ss_pred             eccCCceEEEEEeccceeeeee-cCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhh--ccceeEEEeec
Confidence            9999999999999999888444 47999999999999999999999999999999999999866554  99999999999


Q ss_pred             CCCCeEEEeecCCcEEEEeCCC
Q psy15995        618 PDSALVASGSLDTTIIIWSLAS  639 (683)
Q Consensus       618 ~d~~~l~~~~~d~~v~iw~~~~  639 (683)
                      |.+.+++||+.||.|.+|.=.+
T Consensus       599 ~~~~~~~tgg~Dg~i~~wkD~T  620 (775)
T KOG0319|consen  599 PLLDMFVTGGGDGRIIFWKDVT  620 (775)
T ss_pred             CccceeEecCCCeEEEEeecCc
Confidence            9999999999999999997544

>KOG0291|consensus

Probab=100.00  E-value=1.1e-55  Score=410.16  Aligned_cols=541  Identities=18%  Similarity=0.269  Sum_probs=445.0

Q ss_pred             eeeeccCCCCCCceeecCCCCCCceeeecccceeecCCCcccCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCc-----
Q psy15995          2 IFATLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPA-----   76 (683)
Q Consensus         2 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~-----   76 (683)
                      =+..+.-+|+|+.++. -+..|+..++......++..+..  ...+.++.|||||+++|.+.++.+.||......     
T Consensus        57 NI~~ialSp~g~llla-vdE~g~~~lvs~~~r~Vlh~f~f--k~~v~~i~fSPng~~fav~~gn~lqiw~~P~~~~~~~~  133 (893)
T KOG0291|consen   57 NITRIALSPDGTLLLA-VDERGRALLVSLLSRSVLHRFNF--KRGVGAIKFSPNGKFFAVGCGNLLQIWHAPGEIKNEFN  133 (893)
T ss_pred             ceEEEEeCCCceEEEE-EcCCCcEEEEecccceeeEEEee--cCccceEEECCCCcEEEEEecceeEEEecCcchhcccC
Confidence            3567888999987776 45567777776666666544333  457889999999999999999999999976532     


Q ss_pred             ---ccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccc
Q psy15995         77 ---ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIG  153 (683)
Q Consensus        77 ---~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  153 (683)
                         +.+++.||-..|+++.||.|.++|++|+.|.++++|++...+.+.......            +...|....|..+.
T Consensus       134 pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~g------------Hkd~VvacfF~~~~  201 (893)
T KOG0291|consen  134 PFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNLFTYALNG------------HKDYVVACFFGANS  201 (893)
T ss_pred             cceEeeeecCCccceeEEEeccCCceEEeccccceEEEEEeccccccceEeccC------------CCcceEEEEeccCc
Confidence               345678999999999999999999999999999999998776633332222            22788899999999


Q ss_pred             eEEEeecCCccEEEEeccc-----------------------cce---------eeeccccccCCCeeEEEEcCCCCeEE
Q psy15995        154 FYIASGDISGKVRIWDTVN-----------------------KEH---------ILKNEFHPIGGPIKDIAWSPDNQRMV  201 (683)
Q Consensus       154 ~~l~~~~~d~~i~iwd~~~-----------------------~~~---------~~~~~~~~~~~~i~~~~~s~~~~~l~  201 (683)
                      .-+.+.+.||.+.+|....                       ++.         ..+.-+...+..+++.+|++.-..|+
T Consensus       202 ~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lv  281 (893)
T KOG0291|consen  202 LDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLV  281 (893)
T ss_pred             ceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEE
Confidence            9999999999999998771                       111         01112223336899999999888888


Q ss_pred             EEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEee-CCCeEEEEcCCCCceeeeccccccCeEEEEE
Q psy15995        202 VVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGS-EDNTIAVFEGPPFKFKMTKQEHSRFVQAVRY  280 (683)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~  280 (683)
                      ++-.++.  ..++.+..-..++.+.-...+|..++|+..|.+ ++.|+ .-|.+-||+.+....+...++|...++++++
T Consensus       282 vgFssG~--f~LyelP~f~lih~LSis~~~I~t~~~N~tGDW-iA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~Y  358 (893)
T KOG0291|consen  282 VGFSSGE--FGLYELPDFNLIHSLSISDQKILTVSFNSTGDW-IAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAY  358 (893)
T ss_pred             EEecCCe--eEEEecCCceEEEEeecccceeeEEEecccCCE-EEEcCCccceEEEEEeeccceeeeccccccceeeEEE
Confidence            8776653  568888888899999999999999999999997 55554 4589999999999999999999999999999


Q ss_pred             CCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcc
Q psy15995        281 SPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQV  360 (683)
Q Consensus       281 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  360 (683)
                      +|||+++|+|+.||.|++||..++-+..++..  |...|+.+.|+..++.+++.+.||+|+.||+...+.-+++..+.+.
T Consensus       359 SpDgq~iaTG~eDgKVKvWn~~SgfC~vTFte--Hts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~  436 (893)
T KOG0291|consen  359 SPDGQLIATGAEDGKVKVWNTQSGFCFVTFTE--HTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPI  436 (893)
T ss_pred             CCCCcEEEeccCCCcEEEEeccCceEEEEecc--CCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCce
Confidence            99999999999999999999999999999987  9999999999999999999999999999999999999999999999


Q ss_pred             eeceEEEEecCCEEEEEecCC-cEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCccee
Q psy15995        361 EDQQVSCLWQGDYLLTVSLSG-FISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRV  439 (683)
Q Consensus       361 ~~~~~~~~~~~~~l~~~~~~g-~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~  439 (683)
                      +..+++..|.|..+.+|+.|. .|.+|+.++ ++.+..+.+|+++|.+++|+|++..|++++.|.+|++||+-....   
T Consensus       437 QfscvavD~sGelV~AG~~d~F~IfvWS~qT-GqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~---  512 (893)
T KOG0291|consen  437 QFSCVAVDPSGELVCAGAQDSFEIFVWSVQT-GQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSG---  512 (893)
T ss_pred             eeeEEEEcCCCCEEEeeccceEEEEEEEeec-CeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCc---
Confidence            999999999999999999987 799999998 667889999999999999999999999999999999999754321   


Q ss_pred             ccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeec
Q psy15995        440 QGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLP  519 (683)
Q Consensus       440 ~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  519 (683)
                                                                                                .+..++
T Consensus       513 --------------------------------------------------------------------------~vEtl~  518 (893)
T KOG0291|consen  513 --------------------------------------------------------------------------TVETLE  518 (893)
T ss_pred             --------------------------------------------------------------------------eeeeEe
Confidence                                                                                      122233


Q ss_pred             CCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCccee-------------------ecCCcCeeEEEECCCCCEEE
Q psy15995        520 IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE-------------------LDHLGPVTDCSFSPSNEYLV  580 (683)
Q Consensus       520 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------------------~~~~~~v~~~~~s~~~~~l~  580 (683)
                      ....+..++|+|+|+.||+++-||.|.+||.+.+.......                   .......+.+++|+||.+++
T Consensus       519 i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~Il  598 (893)
T KOG0291|consen  519 IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCIL  598 (893)
T ss_pred             eccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEE
Confidence            34467889999999999999999999999987654331111                   01346789999999999999


Q ss_pred             EEeCCCeEEEEECCCCccccccceee------------------------------------------------------
Q psy15995        581 ASDAHRKVVLYRVPDFELAHNKEWGF------------------------------------------------------  606 (683)
Q Consensus       581 ~~~~d~~i~i~~~~~~~~~~~~~~~~------------------------------------------------------  606 (683)
                      +|+..+.|++|++.++-++...+...                                                      
T Consensus       599 AgG~sn~iCiY~v~~~vllkkfqiS~N~sLdg~~efln~rkmtEfG~~~LiD~e~~~~e~~i~~~lpG~~~gdlssRr~r  678 (893)
T KOG0291|consen  599 AGGESNSICIYDVPEGVLLKKFQISDNRSLDGVLEFLNRRKMTEFGNMDLIDTEESDLEGRIDIALPGVQRGDLSSRRFR  678 (893)
T ss_pred             ecCCcccEEEEECchhheeeeEEeccccchhHHHHHhccccccccCCccccccccccccccccccCCccccCCccccccC
Confidence            99999999999997654433221110                                                      


Q ss_pred             ecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCc
Q psy15995        607 HSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPA  641 (683)
Q Consensus       607 h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~  641 (683)
                      ..-.|.++.|||.|+-+|.++..| +.||.+.+.-
T Consensus       679 peIrv~sv~fsPtgraFAaatTEG-l~IYsld~~~  712 (893)
T KOG0291|consen  679 PEIRVTSVQFSPTGRAFAAATTEG-LLIYSLDTTI  712 (893)
T ss_pred             ceEEEEEEEECCCcCeeeeecccc-eEEEecCCce
Confidence            112378999999999999999998 8899886643

>KOG0291|consensus

Probab=100.00  E-value=2.6e-55  Score=407.78  Aligned_cols=530  Identities=20%  Similarity=0.306  Sum_probs=440.3

Q ss_pred             EEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccC
Q psy15995         49 VLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPI  128 (683)
Q Consensus        49 ~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~  128 (683)
                      .+.|++||.-+.+..++.|.++|+.+++-...--.+...|++++.||+|.+|++..+.|...+-++.....+..+.+.  
T Consensus        19 nl~ft~dG~sviSPvGNrvsv~dLknN~S~Tl~~e~~~NI~~ialSp~g~lllavdE~g~~~lvs~~~r~Vlh~f~fk--   96 (893)
T KOG0291|consen   19 NLVFTKDGNSVISPVGNRVSVFDLKNNKSYTLPLETRYNITRIALSPDGTLLLAVDERGRALLVSLLSRSVLHRFNFK--   96 (893)
T ss_pred             cEEECCCCCEEEeccCCEEEEEEccCCcceeEEeecCCceEEEEeCCCceEEEEEcCCCcEEEEecccceeeEEEeec--
Confidence            356999999999999999999999987765544468899999999999999999999999999998888777776666  


Q ss_pred             CCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccce------eeeccccccCCCeeEEEEcCCCCeEEE
Q psy15995        129 GGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEH------ILKNEFHPIGGPIKDIAWSPDNQRMVV  202 (683)
Q Consensus       129 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~------~~~~~~~~~~~~i~~~~~s~~~~~l~~  202 (683)
                                   .++.++.|||||+++|.+.. +.+.||.......      .+...+.+|-..|.++.|+.|.+++++
T Consensus        97 -------------~~v~~i~fSPng~~fav~~g-n~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~  162 (893)
T KOG0291|consen   97 -------------RGVGAIKFSPNGKFFAVGCG-NLLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVT  162 (893)
T ss_pred             -------------CccceEEECCCCcEEEEEec-ceeEEEecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEe
Confidence                         68999999999999998874 6799998865322      233445667789999999999999999


Q ss_pred             EecCCceEEEEEEccCCCc--eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC--C-----------------
Q psy15995        203 VGEGRERFGHVFMSETGTS--VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP--P-----------------  261 (683)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~--~-----------------  261 (683)
                      ++.+..  .+++..+..+.  ...+.+|.+.|..+.|..+... +++.+.||.+.+|...  +                 
T Consensus       163 gsrD~s--~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~-l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~  239 (893)
T KOG0291|consen  163 GSRDLS--ARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLD-LYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEE  239 (893)
T ss_pred             ccccce--EEEEEeccccccceEeccCCCcceEEEEeccCcce-EEEEecCceEEEEEecCCCccccccccccccccccc
Confidence            887643  56666665444  6678999999999999999885 9999999999999754  0                 


Q ss_pred             ----Cce-----------eeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc
Q psy15995        262 ----FKF-----------KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP  326 (683)
Q Consensus       262 ----~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~  326 (683)
                          ++.           ..-+......+++.+|++..+.|+++-..|...+|++..-.+++.+..  ...+|..++|+.
T Consensus       240 ~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSi--s~~~I~t~~~N~  317 (893)
T KOG0291|consen  240 MDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSI--SDQKILTVSFNS  317 (893)
T ss_pred             ccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeec--ccceeeEEEecc
Confidence                111           111122347799999999999999999999999999999999999986  778999999999


Q ss_pred             CCCEEEEEECC-CcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccE
Q psy15995        327 DGTQLLTASGD-KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPI  405 (683)
Q Consensus       327 ~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v  405 (683)
                      .|..++.++.. |.+.+|+.++..-+.                                            ..++|...+
T Consensus       318 tGDWiA~g~~klgQLlVweWqsEsYVl--------------------------------------------KQQgH~~~i  353 (893)
T KOG0291|consen  318 TGDWIAFGCSKLGQLLVWEWQSESYVL--------------------------------------------KQQGHSDRI  353 (893)
T ss_pred             cCCEEEEcCCccceEEEEEeeccceee--------------------------------------------eccccccce
Confidence            99999998764 789999988765432                                            346899999


Q ss_pred             EEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe--CCeEEEEEcCCeEEEEeCCCCcccCCcee
Q psy15995        406 TALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLSSNAYSGPEVK  483 (683)
Q Consensus       406 ~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~~~~~~~~~~~~~~~  483 (683)
                      ++++++|||+++++|+.||.|++||..++-+..++ ..|...|+.+.|.  ++.+++.+-||+|+.||+.....      
T Consensus       354 ~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTF-teHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrN------  426 (893)
T KOG0291|consen  354 TSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTF-TEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRN------  426 (893)
T ss_pred             eeEEECCCCcEEEeccCCCcEEEEeccCceEEEEe-ccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccce------
Confidence            99999999999999999999999999999998887 6799999999998  99999999999999999986532      


Q ss_pred             cCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCC-cEEEEEcCCCccCcceeec
Q psy15995        484 LGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADS-KVHIYELNNKSLSPKAELD  562 (683)
Q Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~  562 (683)
                                                   -+....|.+....+++..|.|.+++.|+.|. .|.+|++++++++ ....+
T Consensus       427 -----------------------------fRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqll-DiLsG  476 (893)
T KOG0291|consen  427 -----------------------------FRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLL-DILSG  476 (893)
T ss_pred             -----------------------------eeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeee-ehhcC
Confidence                                         1122233344567899999999999998876 4999999999988 44558


Q ss_pred             CCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCce
Q psy15995        563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAK  642 (683)
Q Consensus       563 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~  642 (683)
                      |+++|.+++|+|++..|++++.|.+|++||+-...-... .+. +...++.++|+|||+-||++.-||.|.+||......
T Consensus       477 HEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vE-tl~-i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q  554 (893)
T KOG0291|consen  477 HEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVE-TLE-IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQ  554 (893)
T ss_pred             CCCcceeeEEccccCeEEeccccceEEEEEeeccCceee-eEe-eccceeEEEEcCCCCeEEEEEecceEEEEEhhhcee
Confidence            999999999999999999999999999999976533221 222 778899999999999999999999999999987665


Q ss_pred             eeEee------------------cCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEeecc
Q psy15995        643 HIIIK------------------NAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       643 ~~~~~------------------~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~~~  682 (683)
                      ...+.                  ........+.|+++ |++.+++||..+.|++|++..
T Consensus       555 ~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~  613 (893)
T KOG0291|consen  555 VGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPE  613 (893)
T ss_pred             eccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECch
Confidence            53321                  22234678999999 999999999999999999863

>KOG0306|consensus

Probab=100.00  E-value=5e-54  Score=399.00  Aligned_cols=539  Identities=18%  Similarity=0.247  Sum_probs=437.6

Q ss_pred             eEEEeeCCCCCeEEEecCCeEEEEeCCCCccccccc--CcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccc
Q psy15995         47 PIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYT--EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNE  124 (683)
Q Consensus        47 ~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~--~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~  124 (683)
                      ...+.=+..|++++....-.|.+||+.+++....+.  .....|+|++-+||.-+||.|..||.|+||+..++..+.++.
T Consensus        25 ~~~~~~~~~Gr~va~~a~E~vn~WdlRtge~~~~l~~~~~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfn  104 (888)
T KOG0306|consen   25 NFVVKRSGKGRAVAVSALEQVNIWDLRTGEIEKKLILLKKKAEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILITFN  104 (888)
T ss_pred             eEEEeecCCCcEEEEeccccEeEEeeecchhhhhhhhhcccceEEEeeccCCcceEEEEecCceEEeeccCCCceeeeec
Confidence            333434567999999888899999999995544433  345689999999999999999999999999999998888888


Q ss_pred             cccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEe
Q psy15995        125 FHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVG  204 (683)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  204 (683)
                      +|.              ..|+.+.|...|..||+|+.|+.|.+||+-....  .+.+.+|...|+.+-|..+.+.+++++
T Consensus       105 gHK--------------~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~G--l~rL~GHkd~iT~~~F~~~~~~lvS~s  168 (888)
T KOG0306|consen  105 GHK--------------AAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEG--LFRLRGHKDSITQALFLNGDSFLVSVS  168 (888)
T ss_pred             ccc--------------cceEEEEEcccCceEeecCCCccEEEEEecccee--eEEeecchHHHhHHhccCCCeEEEEec
Confidence            887              8899999999999999999999999999987663  467788899999999999888888888


Q ss_pred             cCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC----------------------
Q psy15995        205 EGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF----------------------  262 (683)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~----------------------  262 (683)
                      .+.  .+.+|+.++..+..+...|.+.++.+++.++   ++++++.|+.+++|++...                      
T Consensus       169 KDs--~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~---~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqs  243 (888)
T KOG0306|consen  169 KDS--MIKFWDLETQHCFETHVDHRGEIWALVLDEK---LLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQS  243 (888)
T ss_pred             cCc--eEEEEecccceeeeEEecccceEEEEEEecc---eEEEEecCCceEEEEeecccccccccccceeeccceeeecc
Confidence            665  4899999999999999999999999999993   5999999999999986100                      


Q ss_pred             --ceee----------ecc-------------------------------------------------------ccccCe
Q psy15995        263 --KFKM----------TKQ-------------------------------------------------------EHSRFV  275 (683)
Q Consensus       263 --~~~~----------~~~-------------------------------------------------------~~~~~v  275 (683)
                        +.+.          ..+                                                       .-...+
T Consensus       244 k~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~ki  323 (888)
T KOG0306|consen  244 KGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKI  323 (888)
T ss_pred             CCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhhe
Confidence              0000          000                                                       002235


Q ss_pred             EEEEECCCCC---EEEEEcCCCcEEEEeCCC-Ce------eEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEEC
Q psy15995        276 QAVRYSPSGS---HFASAGFDGKVFLYDGAS-AD------LVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI  345 (683)
Q Consensus       276 ~~~~~~~~~~---~l~~~~~dg~i~iw~~~~-~~------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  345 (683)
                      .++.|-|.+.   .|+. -.+.++..|.++. +.      .+..+...+|...|.+++++.+...+++++ .+.+++|+.
T Consensus       324 ks~dv~~~~~~~~~lv~-l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~  401 (888)
T KOG0306|consen  324 KSFDVTPSGGTENTLVL-LANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNR  401 (888)
T ss_pred             eEEEEEecCCcceeEEE-eecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecC-CCcEEEEEc
Confidence            5666666543   2333 4456777776654 11      123344456999999999998887777765 568999999


Q ss_pred             CCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCc
Q psy15995        346 ETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGF  425 (683)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  425 (683)
                      .+.++++++...   -.....+.|.+.+++.|..+|.+.+||+.. ...+.+.+.|.+.|++++.+||++.+++|+.|.+
T Consensus       402 ~t~kciRTi~~~---y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS-~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDkt  477 (888)
T KOG0306|consen  402 DTLKCIRTITCG---YILASKFVPGDRYIVLGTKNGELQVFDLAS-ASLVETIRAHDGAIWSISLSPDNKGFVTGSADKT  477 (888)
T ss_pred             cCcceeEEeccc---cEEEEEecCCCceEEEeccCCceEEEEeeh-hhhhhhhhccccceeeeeecCCCCceEEecCCcE
Confidence            999999988665   556677888999999999999999999998 5566777899999999999999999999999999


Q ss_pred             EEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEece
Q psy15995        426 ITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQ  505 (683)
Q Consensus       426 i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (683)
                      |++||..-...    ..+....+.+                                                       
T Consensus       478 VkfWdf~l~~~----~~gt~~k~ls-------------------------------------------------------  498 (888)
T KOG0306|consen  478 VKFWDFKLVVS----VPGTQKKVLS-------------------------------------------------------  498 (888)
T ss_pred             EEEEeEEEEec----cCcccceeee-------------------------------------------------------
Confidence            99999742111    0111111100                                                       


Q ss_pred             EEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCC
Q psy15995        506 ISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAH  585 (683)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  585 (683)
                            -.....++....+.|+.+|||+++||++--|.++++|-+++.++. ....+|.-||.++..|||++.+++|+.|
T Consensus       499 ------l~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFf-lsLYGHkLPV~smDIS~DSklivTgSAD  571 (888)
T KOG0306|consen  499 ------LKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFF-LSLYGHKLPVLSMDISPDSKLIVTGSAD  571 (888)
T ss_pred             ------eccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeee-eeecccccceeEEeccCCcCeEEeccCC
Confidence                  012234455667899999999999999999999999999998876 4456899999999999999999999999


Q ss_pred             CeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCC
Q psy15995        586 RKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DND  664 (683)
Q Consensus       586 ~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~  664 (683)
                      .+|++|-++-|.+..... . |+..|.++.|-|+..++++++.|+.|+-||-..-+....+..  |...|.+++.+ +|.
T Consensus       572 KnVKiWGLdFGDCHKS~f-A-HdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~--H~~ev~cLav~~~G~  647 (888)
T KOG0306|consen  572 KNVKIWGLDFGDCHKSFF-A-HDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDG--HHSEVWCLAVSPNGS  647 (888)
T ss_pred             CceEEeccccchhhhhhh-c-ccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeecc--chheeeeeEEcCCCC
Confidence            999999999998865433 3 999999999999999999999999999999999999888876  67899999999 778


Q ss_pred             eEEEeeCCCcEEEEeecc
Q psy15995        665 LLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       665 ~l~s~~~d~~v~vw~~~~  682 (683)
                      +++|+|.|.+|++|.-.+
T Consensus       648 ~vvs~shD~sIRlwE~td  665 (888)
T KOG0306|consen  648 FVVSSSHDKSIRLWERTD  665 (888)
T ss_pred             eEEeccCCceeEeeeccC
Confidence            999999999999998653

>KOG0271|consensus

Probab=100.00  E-value=3e-55  Score=374.53  Aligned_cols=367  Identities=25%  Similarity=0.419  Sum_probs=303.8

Q ss_pred             CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEE
Q psy15995        220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLY  299 (683)
Q Consensus       220 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  299 (683)
                      ++-..+.+|.++|.+++|+|++.. |++|+.|.++++||+.+.....+.++|...|.|++|+|||+.||+|+.||+|++|
T Consensus       106 rCssS~~GH~e~Vl~~~fsp~g~~-l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lw  184 (480)
T KOG0271|consen  106 RCSSSIAGHGEAVLSVQFSPTGSR-LVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLW  184 (480)
T ss_pred             eeccccCCCCCcEEEEEecCCCce-EEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEe
Confidence            344568899999999999999985 9999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCeeEEeccCCccccCeEEEEEcc-----CCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEE
Q psy15995        300 DGASADLVSELGNPAHKGGVYAVAWKP-----DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL  374 (683)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  374 (683)
                      |.++|+.+...- ++|...|++++|.|     ..++|++++.||.++|||+..+..+                       
T Consensus       185 dpktg~~~g~~l-~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~-----------------------  240 (480)
T KOG0271|consen  185 DPKTGQQIGRAL-RGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCV-----------------------  240 (480)
T ss_pred             cCCCCCcccccc-cCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEE-----------------------
Confidence            999987765432 35999999999976     6779999999999999999877654                       


Q ss_pred             EEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe
Q psy15995        375 LTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT  454 (683)
Q Consensus       375 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~  454 (683)
                                           ..+.+|..+|+|+.|-.+ .++++|+.|++|++|+...+...+.+ .+|...|+.++.+
T Consensus       241 ---------------------~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~dG~~~r~l-kGHahwvN~lals  297 (480)
T KOG0271|consen  241 ---------------------RTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRALDGKLCREL-KGHAHWVNHLALS  297 (480)
T ss_pred             ---------------------EEeccCccceEEEEEcCC-ceEEecCCCceEEEEEccchhHHHhh-cccchheeeeecc
Confidence                                 345789999999999765 58999999999999999998888777 7899999999887


Q ss_pred             CCeEE-EEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCC
Q psy15995        455 GELLY-TCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEH  533 (683)
Q Consensus       455 ~~~l~-~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  533 (683)
                      -++.+ ++..|.       .........   +.+..                           .+    +-.....-..+
T Consensus       298 Tdy~LRtgaf~~-------t~~~~~~~s---e~~~~---------------------------Al----~rY~~~~~~~~  336 (480)
T KOG0271|consen  298 TDYVLRTGAFDH-------TGRKPKSFS---EEQKK---------------------------AL----ERYEAVLKDSG  336 (480)
T ss_pred             chhhhhcccccc-------ccccCCChH---HHHHH---------------------------HH----HHHHHhhccCc
Confidence            44433 222111       111000000   00000                           00    00011122235


Q ss_pred             CEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEE
Q psy15995        534 GLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNC  613 (683)
Q Consensus       534 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~  613 (683)
                      ..|++|++|.++.+|+....+.......+|..-|..+.||||++++|+++-|..|++|+..+|+.+..++  +|-++|..
T Consensus       337 erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfR--GHv~~VYq  414 (480)
T KOG0271|consen  337 ERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFR--GHVAAVYQ  414 (480)
T ss_pred             ceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhh--hccceeEE
Confidence            7899999999999999876654445556799999999999999999999999999999999999986544  49999999


Q ss_pred             EEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEe
Q psy15995        614 VAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWE  679 (683)
Q Consensus       614 ~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~  679 (683)
                      ++||.|.++|++++.|.++++|++++.+...-+++  |.++|.++.|+ |++++++++.|..+++|+
T Consensus       415 vawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpG--h~DEVf~vDwspDG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  415 VAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPG--HADEVFAVDWSPDGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             EEeccCccEEEEcCCCceEEEEEeeeeeecccCCC--CCceEEEEEecCCCceeecCCCceEEEeec
Confidence            99999999999999999999999999888888876  89999999999 889999999999999996

>KOG0271|consensus

Probab=100.00  E-value=1.3e-52  Score=358.51  Aligned_cols=327  Identities=24%  Similarity=0.402  Sum_probs=297.0

Q ss_pred             ccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEe
Q psy15995         79 DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIAS  158 (683)
Q Consensus        79 ~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  158 (683)
                      ..+.||.++|.|++|+|+|++||+|+.|.++++||+.+..++.+.+.|.              ..|.+++|+|||+.||+
T Consensus       109 sS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~--------------~WVlcvawsPDgk~iAS  174 (480)
T KOG0271|consen  109 SSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHK--------------NWVLCVAWSPDGKKIAS  174 (480)
T ss_pred             cccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCc--------------cEEEEEEECCCcchhhc
Confidence            4577999999999999999999999999999999999999999999987              89999999999999999


Q ss_pred             ecCCccEEEEeccccceeeeccccccCCCeeEEEEcC-----CCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeE
Q psy15995        159 GDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSP-----DNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPIN  233 (683)
Q Consensus       159 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  233 (683)
                      |+.||+|++||..+++++ -..+.+|...|++++|.|     ..+++++++.++.  ++||+...+.++..+.+|+.+|+
T Consensus       175 G~~dg~I~lwdpktg~~~-g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~--vrIWd~~~~~~~~~lsgHT~~VT  251 (480)
T KOG0271|consen  175 GSKDGSIRLWDPKTGQQI-GRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGS--VRIWDTKLGTCVRTLSGHTASVT  251 (480)
T ss_pred             cccCCeEEEecCCCCCcc-cccccCcccceeEEeecccccCCCccceecccCCCC--EEEEEccCceEEEEeccCccceE
Confidence            999999999999998765 356788999999999976     5678888777665  78999999999999999999999


Q ss_pred             EEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEEC-----------CC-------------------
Q psy15995        234 SCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYS-----------PS-------------------  283 (683)
Q Consensus       234 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~-----------~~-------------------  283 (683)
                      |+.|--++  ++++|+.|++|++|+...+++...+++|...|+.++.+           |.                   
T Consensus       252 CvrwGG~g--liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~  329 (480)
T KOG0271|consen  252 CVRWGGEG--LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYE  329 (480)
T ss_pred             EEEEcCCc--eEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHH
Confidence            99999887  69999999999999999999999999999999999887           22                   


Q ss_pred             ------CCEEEEEcCCCcEEEEeCCCC-eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEe
Q psy15995        284 ------GSHFASAGFDGKVFLYDGASA-DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIM  356 (683)
Q Consensus       284 ------~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  356 (683)
                            ++.|++|+.|.++.+|+.... +++..+..  |..-|..+.|+||++++++++.|..|++|+.++|+.+.    
T Consensus       330 ~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtg--Hq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~la----  403 (480)
T KOG0271|consen  330 AVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTG--HQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLA----  403 (480)
T ss_pred             HhhccCcceeEEecCCceEEEecccccccchhhhhc--hhhheeeEEECCCccEEEEeecccceeeeeCCCcchhh----
Confidence                  235999999999999986544 46666655  99999999999999999999999999999999988654    


Q ss_pred             cCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCc
Q psy15995        357 GNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEN  436 (683)
Q Consensus       357 ~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~  436 (683)
                                                              .+++|-..|..++|+.|.++|++|+.|.++++|++++.+.
T Consensus       404 ----------------------------------------sfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl  443 (480)
T KOG0271|consen  404 ----------------------------------------SFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKL  443 (480)
T ss_pred             ----------------------------------------hhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeee
Confidence                                                    3578999999999999999999999999999999999887


Q ss_pred             ceeccCCCCcceeEEEEe--CCeEEEEEcCCeEEEEe
Q psy15995        437 DRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVD  471 (683)
Q Consensus       437 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~~~  471 (683)
                      ...+ .+|...|.++.+.  |..+++++.|..+++|.
T Consensus       444 ~~DL-pGh~DEVf~vDwspDG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  444 KQDL-PGHADEVFAVDWSPDGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             cccC-CCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence            7666 7899999999998  89999999999999995

>KOG0306|consensus

Probab=100.00  E-value=2.1e-48  Score=361.70  Aligned_cols=489  Identities=19%  Similarity=0.262  Sum_probs=397.2

Q ss_pred             CCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccc
Q psy15995         45 GQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKN  123 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~  123 (683)
                      -.++|+.-+||.-.||.| .||.|+||+..+....-++.||+.+|+++.|+..|.+||||+.|+.|.+||+-...-+.++
T Consensus        66 ~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL  145 (888)
T KOG0306|consen   66 AEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRL  145 (888)
T ss_pred             ceEEEeeccCCcceEEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEe
Confidence            478899889999999999 7999999999999988899999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEE
Q psy15995        124 EFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV  203 (683)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  203 (683)
                      .+|.              ..|+..-|..+..+|++.+.|+.|++||+++..+.  ...-.|.+.+..+++.+  +.++++
T Consensus       146 ~GHk--------------d~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf--~Thvd~r~Eiw~l~~~~--~~lvt~  207 (888)
T KOG0306|consen  146 RGHK--------------DSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCF--ETHVDHRGEIWALVLDE--KLLVTA  207 (888)
T ss_pred             ecch--------------HHHhHHhccCCCeEEEEeccCceEEEEecccceee--eEEecccceEEEEEEec--ceEEEE
Confidence            8887              78888899998999999999999999999998755  34445678899999988  455555


Q ss_pred             ecCCceEEEEEEccC------------------------CCceeeeec--------------------------------
Q psy15995        204 GEGRERFGHVFMSET------------------------GTSVGEISG--------------------------------  227 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~------------------------~~~~~~~~~--------------------------------  227 (683)
                      +.+.+  ..+|....                        ++.+.....                                
T Consensus       208 ~~dse--~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~K  285 (888)
T KOG0306|consen  208 GTDSE--LKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSK  285 (888)
T ss_pred             ecCCc--eEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHH
Confidence            54443  45555410                        000000000                                


Q ss_pred             ---------------------------------CCcCeEEEEeecCCCe--EEEEeeCCCeEEEEcCCCCcee-------
Q psy15995        228 ---------------------------------QSKPINSCDFKPSRPF--RIITGSEDNTIAVFEGPPFKFK-------  265 (683)
Q Consensus       228 ---------------------------------~~~~v~~~~~~~~~~~--~l~~~~~d~~i~iw~~~~~~~~-------  265 (683)
                                                       -...+.++.+.|.+..  .++. -.++++..|.++.....       
T Consensus       286 k~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~-l~nNtv~~ysl~~s~~~~p~~~~~  364 (888)
T KOG0306|consen  286 KLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVL-LANNTVEWYSLENSGKTSPEADRT  364 (888)
T ss_pred             HHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEE-eecCceEEEEeccCCCCCcccccc
Confidence                                             0234556666654432  2333 55677777776542211       


Q ss_pred             --eeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEE
Q psy15995        266 --MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLW  343 (683)
Q Consensus       266 --~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw  343 (683)
                        ..+.+|...|++++++.+...+++|+ .+.+++|+..+.++++++.    .+.+.+..|.|.++++++|...|.+.++
T Consensus       365 ~~i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~----~~y~l~~~Fvpgd~~Iv~G~k~Gel~vf  439 (888)
T KOG0306|consen  365 SNIEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTIT----CGYILASKFVPGDRYIVLGTKNGELQVF  439 (888)
T ss_pred             ceeeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEec----cccEEEEEecCCCceEEEeccCCceEEE
Confidence              45678999999999999998777776 6789999999999999995    3489999999999999999999999999


Q ss_pred             ECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCC----CCcceeee-------eeccccEEEEEEeC
Q psy15995        344 DIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN----PSTPIRVI-------KGHNKPITALALSP  412 (683)
Q Consensus       344 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~----~~~~~~~~-------~~~~~~v~~~~~~~  412 (683)
                      |+.+...+.+.. .+......++..|++..+++++.|.+|++||...    +....+.+       -.-...|.|+.+||
T Consensus       440 dlaS~~l~Eti~-AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Sp  518 (888)
T KOG0306|consen  440 DLASASLVETIR-AHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSP  518 (888)
T ss_pred             Eeehhhhhhhhh-ccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcC
Confidence            999988877765 6778889999999999999999999999999752    11111111       12356799999999


Q ss_pred             CCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceee
Q psy15995        413 DRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLD  492 (683)
Q Consensus       413 ~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~  492 (683)
                      |+++|+++--|++|++|-+.+-+....+ .+|                                                
T Consensus       519 dgk~LaVsLLdnTVkVyflDtlKFflsL-YGH------------------------------------------------  549 (888)
T KOG0306|consen  519 DGKLLAVSLLDNTVKVYFLDTLKFFLSL-YGH------------------------------------------------  549 (888)
T ss_pred             CCcEEEEEeccCeEEEEEecceeeeeee-ccc------------------------------------------------
Confidence            9999999999999999998876654333 223                                                


Q ss_pred             ecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEE
Q psy15995        493 IDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSF  572 (683)
Q Consensus       493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~  572 (683)
                                                  .-++.++.++||++++++|+.|..|++|-++-+... +...+|.+.|.++.|
T Consensus       550 ----------------------------kLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCH-KS~fAHdDSvm~V~F  600 (888)
T KOG0306|consen  550 ----------------------------KLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCH-KSFFAHDDSVMSVQF  600 (888)
T ss_pred             ----------------------------ccceeEEeccCCcCeEEeccCCCceEEeccccchhh-hhhhcccCceeEEEE
Confidence                                        346788899999999999999999999999988776 444579999999999


Q ss_pred             CCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCC
Q psy15995        573 SPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASP  640 (683)
Q Consensus       573 s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~  640 (683)
                      -|+...+.+++.|+.|+-||-...+.+...  .+|...|.|++.+|+|.++++++.|.+|++|.....
T Consensus       601 ~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L--~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~tde  666 (888)
T KOG0306|consen  601 LPKTHLFFTCGKDGKVKQWDGEKFEEIQKL--DGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTDE  666 (888)
T ss_pred             cccceeEEEecCcceEEeechhhhhhheee--ccchheeeeeEEcCCCCeEEeccCCceeEeeeccCc
Confidence            999999999999999999999988877544  349999999999999999999999999999997653

>KOG1408|consensus

Probab=100.00  E-value=8.4e-48  Score=355.52  Aligned_cols=577  Identities=15%  Similarity=0.172  Sum_probs=416.5

Q ss_pred             eeccCCCCCCceeecCCCCCCceeeecccceeecCCCcccCCCeEEEeeCCCCCeEEEecC---CeEEEEeCCCCccccc
Q psy15995          4 ATLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNG---NSVIIRNIENPAISDI   80 (683)
Q Consensus         4 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~---~~i~v~~~~~~~~~~~   80 (683)
                      .+|.-.|....+.   -+.|=.+++..........+-.+.+..++++||||+|+|+|+|.-   ..++||++.....+..
T Consensus        41 ~gLa~~p~Sgl~a---YpAGCvVVlfn~~~~tQ~hlvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVAE  117 (1080)
T KOG1408|consen   41 NGLASVPCSGLCA---YPAGCVVVLFNVDSCTQSHLVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVVAE  117 (1080)
T ss_pred             Cccccccccccee---eccCcEEEEEcccccchhheecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccccchhh
Confidence            3455556554443   356667777777777888888888899999999999999999953   4799999999999999


Q ss_pred             ccCcccceEEEEECCCCcEEEEec--CCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEe
Q psy15995         81 YTEHSCAVNVAKYSPSGFYIASGD--ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIAS  158 (683)
Q Consensus        81 ~~~h~~~v~~~~~s~d~~~las~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  158 (683)
                      |..|+-.|+|++|+|.++|+++.+  .|-.|.+||+.........+..               ..|..++|+.||.|+++
T Consensus       118 fvdHKY~vtcvaFsp~~kyvvSVGsQHDMIVnv~dWr~N~~~asnkis---------------s~Vsav~fsEdgSYfvT  182 (1080)
T KOG1408|consen  118 FVDHKYNVTCVAFSPGNKYVVSVGSQHDMIVNVNDWRVNSSGASNKIS---------------SVVSAVAFSEDGSYFVT  182 (1080)
T ss_pred             hhhccccceeeeecCCCcEEEeeccccceEEEhhhhhhcccccccccc---------------eeEEEEEEccCCceeee
Confidence            999999999999999999999865  4556889988766444333332               67899999999999999


Q ss_pred             ecCCccEEEEeccccceee-eccccccCCCeeEEEEcCCCCeEEEEecCCceE---------EEEEEccCCCceee-eec
Q psy15995        159 GDISGKVRIWDTVNKEHIL-KNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERF---------GHVFMSETGTSVGE-ISG  227 (683)
Q Consensus       159 ~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~-~~~  227 (683)
                      .+ ...|++|.++.++... ...+.+...-.-.+.   +..+++++++.+...         +.+......+.+.. ...
T Consensus       183 ~g-nrHvk~wyl~~~~KykdpiPl~gRs~~lg~lr---~n~f~avaCg~gicAestfait~qGhLvEFSsRRLLDKWVqc  258 (1080)
T KOG1408|consen  183 SG-NRHVKLWYLQIQSKYKDPIPLPGRSYFLGNLR---FNEFLAVACGVGICAESTFAITAQGHLVEFSSRRLLDKWVQC  258 (1080)
T ss_pred             ee-eeeEEEEEeeccccccCCccccchhhhccccc---cchhhhhhhcCcccccceEEEecccceeeechhhhhhhhhhh
Confidence            87 4789999998765211 111221111111111   122233322221110         11222221111111 111


Q ss_pred             CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc-c-----------------------ccCeEEEEECCC
Q psy15995        228 QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE-H-----------------------SRFVQAVRYSPS  283 (683)
Q Consensus       228 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~-----------------------~~~v~~~~~~~~  283 (683)
                      .+...+|++.+.+   ++++|+.+|.|++|+..+.....++.. |                       --...++.|++.
T Consensus       259 RTTnAnCIcVs~r---~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet  335 (1080)
T KOG1408|consen  259 RTTNANCICVSSR---LIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDET  335 (1080)
T ss_pred             hccccceeeeecc---eEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCC
Confidence            2334567777665   599999999999998766554433321 0                       112346789999


Q ss_pred             CCEEEEEcCCCcEEEEeCCCCeeEEec-cCCccccCeEEEEEccC-----------CCEEEEEECCCcEEEEECCCCcee
Q psy15995        284 GSHFASAGFDGKVFLYDGASADLVSEL-GNPAHKGGVYAVAWKPD-----------GTQLLTASGDKTCKLWDIETKSVV  351 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~~~i~~~~~~~~-----------~~~l~~~~~dg~i~iwd~~~~~~~  351 (683)
                      ...|.+...|..+++||++.-..+... ....|...|..+.-.|-           ...+++++.|++|++|++.....-
T Consensus       336 ~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn  415 (1080)
T KOG1408|consen  336 TDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNN  415 (1080)
T ss_pred             CceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeeccccccc
Confidence            999999999999999999875332211 11127777777765541           235899999999999999752211


Q ss_pred             eEE------------------------------------EecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcce
Q psy15995        352 SEF------------------------------------IMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPI  395 (683)
Q Consensus       352 ~~~------------------------------------~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~  395 (683)
                      ..+                                    ..........++.+|++++|++|...|++++|++.+ .+..
T Consensus       416 ~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~-l~~~  494 (1080)
T KOG1408|consen  416 QVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQE-LEYT  494 (1080)
T ss_pred             ceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehh-hhhh
Confidence            110                                    011223456888999999999999999999999987 4455


Q ss_pred             eeeeeccccEEEEEEeC---CCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe----CCeEEEEEcCCeEE
Q psy15995        396 RVIKGHNKPITALALSP---DRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT----GELLYTCGIDDTIK  468 (683)
Q Consensus       396 ~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~  468 (683)
                      ..+..|+.+|.|+.|+.   ..++|++++.|..|.+||....-.......+|...|+++.|.    +..+++++.|+.|.
T Consensus       495 ~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksim  574 (1080)
T KOG1408|consen  495 CFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIM  574 (1080)
T ss_pred             hheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhh
Confidence            67789999999999986   347899999999999999988776666668899999999998    36899999998876


Q ss_pred             EEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEE
Q psy15995        469 QVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIY  548 (683)
Q Consensus       469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~  548 (683)
                      +--.+..........                            +   ...-....+..+++.|..+++++++.|..|+||
T Consensus       575 Fr~~qk~~~g~~f~r----------------------------~---t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif  623 (1080)
T KOG1408|consen  575 FRVNQKASSGRLFPR----------------------------H---TQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIF  623 (1080)
T ss_pred             eehhccccCceeccc----------------------------c---ccccccceEEEeeeCCCcceEEEEecccceEEE
Confidence            543332110000000                            0   000012345788999999999999999999999


Q ss_pred             EcCCCccCcceee--cCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEe
Q psy15995        549 ELNNKSLSPKAEL--DHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASG  626 (683)
Q Consensus       549 d~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~  626 (683)
                      ++++++....+..  +|++..-.+...|.|-|||+.+.|.++.++|..+++++....  ||...|+.+.|++|-+.|++.
T Consensus       624 ~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~--GHsE~VTG~kF~nDCkHlISv  701 (1080)
T KOG1408|consen  624 DIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMT--GHSEAVTGVKFLNDCKHLISV  701 (1080)
T ss_pred             eccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhc--Ccchheeeeeecccchhheee
Confidence            9999988766554  366788899999999999999999999999999999986544  399999999999999999999


Q ss_pred             ecCCcEEEEeCCC
Q psy15995        627 SLDTTIIIWSLAS  639 (683)
Q Consensus       627 ~~d~~v~iw~~~~  639 (683)
                      +.||.|.||.+..
T Consensus       702 sgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  702 SGDGCIFVWKLPL  714 (1080)
T ss_pred             cCCceEEEEECch
Confidence            9999999999865

>KOG1408|consensus

Probab=100.00  E-value=4.7e-47  Score=350.60  Aligned_cols=567  Identities=17%  Similarity=0.208  Sum_probs=409.8

Q ss_pred             EEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEec--CCCCEEEEeCCCccccccccc
Q psy15995         48 IVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD--ISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        48 ~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~--~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      ..++.+|-..++||..+..|.+||.+..++-+.+..|..+++|+|||++|+|+|+|-  ....++||++.....+.++..
T Consensus        41 ~gLa~~p~Sgl~aYpAGCvVVlfn~~~~tQ~hlvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVAEfvd  120 (1080)
T KOG1408|consen   41 NGLASVPCSGLCAYPAGCVVVLFNVDSCTQSHLVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVVAEFVD  120 (1080)
T ss_pred             CcccccccccceeeccCcEEEEEcccccchhheecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccccchhhhhh
Confidence            356678999999999999999999999998888999999999999999999999985  556799999999888888877


Q ss_pred             ccCCCCcccceeeeeecceeeeEeeccceEEEeecC--CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEE
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI--SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV  203 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  203 (683)
                      |.              -.+.+++|+|.++|+++.+.  |-.|.+||+...-.....   .....|..++|+.||.|++++
T Consensus       121 HK--------------Y~vtcvaFsp~~kyvvSVGsQHDMIVnv~dWr~N~~~asn---kiss~Vsav~fsEdgSYfvT~  183 (1080)
T KOG1408|consen  121 HK--------------YNVTCVAFSPGNKYVVSVGSQHDMIVNVNDWRVNSSGASN---KISSVVSAVAFSEDGSYFVTS  183 (1080)
T ss_pred             cc--------------ccceeeeecCCCcEEEeeccccceEEEhhhhhhccccccc---ccceeEEEEEEccCCceeeee
Confidence            76              77999999999999998765  456788887654322222   233789999999999999998


Q ss_pred             ecCCceEEEEEEccCCCceee---eecCCcCeEEEEeec------------CCCeEEEEeeCCCeEEEEcCCCCceeeec
Q psy15995        204 GEGRERFGHVFMSETGTSVGE---ISGQSKPINSCDFKP------------SRPFRIITGSEDNTIAVFEGPPFKFKMTK  268 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~------------~~~~~l~~~~~d~~i~iw~~~~~~~~~~~  268 (683)
                      +...   +.+|.++.++..+.   +.+...-.-.+.+..            +..  ++. +..|.+.-|.-  .+++-..
T Consensus       184 gnrH---vk~wyl~~~~KykdpiPl~gRs~~lg~lr~n~f~avaCg~gicAest--fai-t~qGhLvEFSs--RRLLDKW  255 (1080)
T KOG1408|consen  184 GNRH---VKLWYLQIQSKYKDPIPLPGRSYFLGNLRFNEFLAVACGVGICAEST--FAI-TAQGHLVEFSS--RRLLDKW  255 (1080)
T ss_pred             eeee---EEEEEeeccccccCCccccchhhhccccccchhhhhhhcCcccccce--EEE-ecccceeeech--hhhhhhh
Confidence            8765   66777765553322   222221111111110            111  111 11232322221  1111100


Q ss_pred             -cccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC----------------------ccccCeEEEEEc
Q psy15995        269 -QEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP----------------------AHKGGVYAVAWK  325 (683)
Q Consensus       269 -~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----------------------~~~~~i~~~~~~  325 (683)
                       +-.+....|++.+  .+++++|+.+|.|++|+..+.+...++..+                      +.--...++.|+
T Consensus       256 VqcRTTnAnCIcVs--~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fd  333 (1080)
T KOG1408|consen  256 VQCRTTNANCICVS--SRLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFD  333 (1080)
T ss_pred             hhhhccccceeeee--cceEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEec
Confidence             1112334566655  458999999999999998776655444321                      111234567899


Q ss_pred             cCCCEEEEEECCCcEEEEECCCCceeeEEEe--cCcc------------eeceEEEEecCCEEEEEecCCcEEEEecCCC
Q psy15995        326 PDGTQLLTASGDKTCKLWDIETKSVVSEFIM--GNQV------------EDQQVSCLWQGDYLLTVSLSGFISYLDVNNP  391 (683)
Q Consensus       326 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~------------~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~  391 (683)
                      +....|.+.-.|..+++||++.-..+.+...  .+..            .....++.| ..-+++++.|++|++|++...
T Consensus       334 et~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp-~~cF~TCSsD~TIRlW~l~~c  412 (1080)
T KOG1408|consen  334 ETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLP-RGCFTTCSSDGTIRLWDLAFC  412 (1080)
T ss_pred             CCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCC-ccceeEecCCCcEEEeecccc
Confidence            9899999999999999999987544322111  1111            111112222 334889999999999998751


Q ss_pred             Cc--c----------ee------------------------eeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCC
Q psy15995        392 ST--P----------IR------------------------VIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE  435 (683)
Q Consensus       392 ~~--~----------~~------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~  435 (683)
                      ..  .          .+                        ...+....+.+++++|+|++|++|..-|++++|++...+
T Consensus       413 tnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~  492 (1080)
T KOG1408|consen  413 TNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELE  492 (1080)
T ss_pred             cccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhh
Confidence            10  0          00                        011223468999999999999999999999999999877


Q ss_pred             cceeccCCCCcceeEEEEe-----CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEe
Q psy15995        436 NDRVQGAGHGNQINGMKAT-----GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVE  510 (683)
Q Consensus       436 ~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (683)
                      ..... ..|...|.++.++     ..+|++++.|.-|.++|...+-.                                 
T Consensus       493 ~~~~~-eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~---------------------------------  538 (1080)
T KOG1408|consen  493 YTCFM-EAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYD---------------------------------  538 (1080)
T ss_pred             hhhhe-ecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccc---------------------------------
Confidence            66555 6799999999998     56889999999999999876521                                 


Q ss_pred             CCceeeee-cCCCCCcEEEEccCC--CEEEEEcCCCcEEEEEcCC---CccCccee-ecCCcCeeEEEECCCCCEEEEEe
Q psy15995        511 NGAKVSSL-PIDYEPSSISLDHEH--GLVAVGGADSKVHIYELNN---KSLSPKAE-LDHLGPVTDCSFSPSNEYLVASD  583 (683)
Q Consensus       511 ~~~~~~~~-~~~~~~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~---~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~  583 (683)
                         .+..+ .+...|+++.|...|  ..+++++.|..|.+--...   +.+..+.. .-....+..++..|..+++++++
T Consensus       539 ---l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~c  615 (1080)
T KOG1408|consen  539 ---LVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVC  615 (1080)
T ss_pred             ---hhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEe
Confidence               11122 256678888888777  7888888988776543331   22211111 11345688999999999999999


Q ss_pred             CCCeEEEEECCCCcccccccee-eecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-
Q psy15995        584 AHRKVVLYRVPDFELAHNKEWG-FHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-  661 (683)
Q Consensus       584 ~d~~i~i~~~~~~~~~~~~~~~-~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-  661 (683)
                      .|..|+||++++++....+... +|.+..-.+...|.|.|||+...|.++.++|+.++++..++.+  |...|+.+.|+ 
T Consensus       616 QDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~G--HsE~VTG~kF~n  693 (1080)
T KOG1408|consen  616 QDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTG--HSEAVTGVKFLN  693 (1080)
T ss_pred             cccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcC--cchheeeeeecc
Confidence            9999999999999887544322 3667788899999999999999999999999999999999977  89999999999 


Q ss_pred             cCCeEEEeeCCCcEEEEeec
Q psy15995        662 DNDLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       662 ~~~~l~s~~~d~~v~vw~~~  681 (683)
                      |-+.|++++.||+|.||+++
T Consensus       694 DCkHlISvsgDgCIFvW~lp  713 (1080)
T KOG1408|consen  694 DCKHLISVSGDGCIFVWKLP  713 (1080)
T ss_pred             cchhheeecCCceEEEEECc
Confidence            77899999999999999985

>KOG1063|consensus

Probab=100.00  E-value=1.7e-44  Score=332.82  Aligned_cols=576  Identities=18%  Similarity=0.252  Sum_probs=401.0

Q ss_pred             EEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCc---EEEEecCCCCEEEEeCCCccccccccc
Q psy15995         49 VLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGF---YIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        49 ~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~---~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      ..++ .-+..+|++.+..|.+||..+......+.||.++|+|+.|-|+.+   ++++|+.|+.|++|.+...........
T Consensus        19 v~sw-~~~~~vafGa~~~Iav~dp~k~~i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~   97 (764)
T KOG1063|consen   19 VSSW-GPGGLVAFGAGPAIAVADPEKILIVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTI   97 (764)
T ss_pred             cccc-cccceEEecCCceEEEeCcccceeEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEee
Confidence            3445 445689999999999999999888888999999999999999887   899999999999999984433332222


Q ss_pred             ccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceee--eccccccCCCeeEEEEcCCCCeEEEE
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHIL--KNEFHPIGGPIKDIAWSPDNQRMVVV  203 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~  203 (683)
                      ..              ....++++...-....+...|+.+.+||.+..+..+  ...+.....-..++++.|+.+.++.+
T Consensus        98 ~g--------------~~~~~~cv~a~~~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla  163 (764)
T KOG1063|consen   98 QG--------------HCKECVCVVARSSVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLA  163 (764)
T ss_pred             cC--------------cceeEEEEEeeeeEEEeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEE
Confidence            21              234455555544444445789999999996655222  22222212234567777855555555


Q ss_pred             ecCCceEEEEEEccCC--CceeeeecCCcCeEEEEeecCC--CeEEEEeeCCCeEEEEcCCCCc----------------
Q psy15995        204 GEGRERFGHVFMSETG--TSVGEISGQSKPINSCDFKPSR--PFRIITGSEDNTIAVFEGPPFK----------------  263 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~----------------  263 (683)
                      .++.+..+.++.-..+  +.+.++.||.+.|.+++|...+  .+++++++.|..|++|.+..+.                
T Consensus       164 ~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~  243 (764)
T KOG1063|consen  164 CGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSN  243 (764)
T ss_pred             ecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccC
Confidence            5555555555554433  5677899999999999998754  4679999999999999643211                


Q ss_pred             -----ee----------eeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC--eeEEeccC--C-ccccCeEEEE
Q psy15995        264 -----FK----------MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA--DLVSELGN--P-AHKGGVYAVA  323 (683)
Q Consensus       264 -----~~----------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~--~-~~~~~i~~~~  323 (683)
                           ..          ..+.+|.+.|.++.|+|.+..|++++.|.++.+|...+.  -.+.....  . +......+..
T Consensus       244 ~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~l  323 (764)
T KOG1063|consen  244 LPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGL  323 (764)
T ss_pred             CceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEE
Confidence                 11          123489999999999999999999999999999976554  22222221  1 1345688899


Q ss_pred             EccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccc
Q psy15995        324 WKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNK  403 (683)
Q Consensus       324 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~  403 (683)
                      |+|+++.+++-+..|..++|.......                                         ..+...+.+|.+
T Consensus       324 w~~n~~~ii~~g~~Gg~hlWkt~d~~~-----------------------------------------w~~~~~iSGH~~  362 (764)
T KOG1063|consen  324 WSPNSNVIIAHGRTGGFHLWKTKDKTF-----------------------------------------WTQEPVISGHVD  362 (764)
T ss_pred             EcCCCCEEEEecccCcEEEEeccCccc-----------------------------------------eeeccccccccc
Confidence            999999999999999999998332221                                         112234678999


Q ss_pred             cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCc---ceeccCCCCcceeEEEEeC--CeEEEEEcCCeEEEEeCCCCccc
Q psy15995        404 PITALALSPDRGTVFTGSHDGFITRWNAKTGEN---DRVQGAGHGNQINGMKATG--ELLYTCGIDDTIKQVDLSSNAYS  478 (683)
Q Consensus       404 ~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~---~~~~~~~~~~~v~~~~~~~--~~l~~~~~d~~i~~~~~~~~~~~  478 (683)
                      .|++++|+|.|.+|++.+.|.+-++|-.-..+.   ....++.|...++++++-+  -.+++|..+..+|+++....-..
T Consensus       363 ~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~  442 (764)
T KOG1063|consen  363 GVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVK  442 (764)
T ss_pred             cceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHH
Confidence            999999999999999999999999987552221   1123356888999999873  45667777778899986533110


Q ss_pred             -----------CC-ceecCCCCceeeecCCeEE----------EEEece------EEEEeCC-----cee-------eee
Q psy15995        479 -----------GP-EVKLGSQPRGLDIDENTLV----------TVTVKQ------ISIVENG-----AKV-------SSL  518 (683)
Q Consensus       479 -----------~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~------~~~~~~~-----~~~-------~~~  518 (683)
                                 .. ..........+..+.....          ....+.      ....+..     ...       ...
T Consensus       443 ~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLY  522 (764)
T KOG1063|consen  443 SLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLY  522 (764)
T ss_pred             HHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhc
Confidence                       00 0111111111111111111          000000      0000000     000       011


Q ss_pred             cCCCCCcEEEEccCCCEEEEEcCCC-----cEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEEC
Q psy15995        519 PIDYEPSSISLDHEHGLVAVGGADS-----KVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRV  593 (683)
Q Consensus       519 ~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~  593 (683)
                      .|.+++.+++.+|+++++|+++...     .|++|+..+-.... ....|.-.|+.++|||||++|++.+.|+++.+|..
T Consensus       523 GHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~-~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~  601 (764)
T KOG1063|consen  523 GHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQ-ELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEV  601 (764)
T ss_pred             cCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhh-eecccceEEEEEEECCCCcEEEEeecCceEEeeee
Confidence            2668999999999999999998754     48999988876664 34469999999999999999999999999999998


Q ss_pred             CCCccccc--cceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCC--ceeeEeecCCCCCCeeEEEEc--cC----
Q psy15995        594 PDFELAHN--KEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASP--AKHIIIKNAHPQSQITRLQWL--DN----  663 (683)
Q Consensus       594 ~~~~~~~~--~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~--~~~~~~~~~~~~~~v~~l~~~--~~----  663 (683)
                      ........  .....|..-|.+..|+||+.++||+|.|.+|++|.....  +....+....+...|++++|.  +.    
T Consensus       602 ~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~  681 (764)
T KOG1063|consen  602 QEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKG  681 (764)
T ss_pred             ecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeecccccccc
Confidence            65332211  113349999999999999999999999999999999988  444443333368899999997  22    


Q ss_pred             CeEEEeeCCCcEEEEeec
Q psy15995        664 DLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       664 ~~l~s~~~d~~v~vw~~~  681 (683)
                      ..++.|-+-|.|.+|+.+
T Consensus       682 ~~vavGle~GeI~l~~~~  699 (764)
T KOG1063|consen  682 DVVAVGLEKGEIVLWRRK  699 (764)
T ss_pred             ceEEEEecccEEEEEecc
Confidence            155667789999999865

>KOG1539|consensus

Probab=100.00  E-value=4e-43  Score=330.77  Aligned_cols=556  Identities=18%  Similarity=0.249  Sum_probs=434.1

Q ss_pred             CCCCCceeeecccceeecCCCcccCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcE
Q psy15995         20 DPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFY   99 (683)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~   99 (683)
                      ...|..+..|...+-.+.......+..|+|++  .+..++.++.++.|.+|-- .....+++.+|.+.|.-+.  |=|.+
T Consensus        52 t~vgksfqvYd~~kl~ll~vs~~lp~~I~ala--s~~~~vy~A~g~~i~~~~r-gk~i~~~~~~~~a~v~~l~--~fGe~  126 (910)
T KOG1539|consen   52 TCVGKSFQVYDVNKLNLLFVSKPLPDKITALA--SDKDYVYVASGNKIYAYAR-GKHIRHTTLLHGAKVHLLL--PFGEH  126 (910)
T ss_pred             EecCceEEEEeccceEEEEecCCCCCceEEEE--ecCceEEEecCcEEEEEEc-cceEEEEeccccceEEEEe--eecce
Confidence            34677788886666666556666778999985  4566777777888888853 2245677888998888877  78889


Q ss_pred             EEEecCCCCEEEEeCCCc-ccc-cccccccCCCCcccceeeeeecceeeeEeecc--ceEEEeecCCccEEEEeccccce
Q psy15995        100 IASGDISGKVRIWDTVNK-EHI-LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI--GFYIASGDISGKVRIWDTVNKEH  175 (683)
Q Consensus       100 las~~~dg~i~iwd~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~d~~i~iwd~~~~~~  175 (683)
                      ++++..++.+.||+.... +.+ ....+.+...           ..|+++ +.|.  =+.++.|+.+|.+.+|++.+++.
T Consensus       127 lia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~-----------~~Ital-~HP~TYLNKIvvGs~~G~lql~Nvrt~K~  194 (910)
T KOG1539|consen  127 LIAVDISNILFVWKTSSIQEELYLQSTFLKVEG-----------DFITAL-LHPSTYLNKIVVGSSQGRLQLWNVRTGKV  194 (910)
T ss_pred             EEEEEccCcEEEEEeccccccccccceeeeccC-----------CceeeE-ecchhheeeEEEeecCCcEEEEEeccCcE
Confidence            999999999999999884 221 1111111000           112222 2332  24678899999999999999996


Q ss_pred             eeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEE
Q psy15995        176 ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIA  255 (683)
Q Consensus       176 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~  255 (683)
                      +  +.++.+...|+++.-+|-=..++++..++.  +.+++.+.++.+..++...++|+.++|..||+..+++++..|.+.
T Consensus       195 v--~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~--ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~  270 (910)
T KOG1539|consen  195 V--YTFQEFFSRITAIEQSPALDVVAIGLENGT--VIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMA  270 (910)
T ss_pred             E--EEecccccceeEeccCCcceEEEEeccCce--EEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEE
Confidence            6  556667799999999998888888887765  789999999999999988899999999999999999999999999


Q ss_pred             EEcCCCCceeeecc-ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCe----eEEeccCCccccCeEEEEEc-cCCC
Q psy15995        256 VFEGPPFKFKMTKQ-EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASAD----LVSELGNPAHKGGVYAVAWK-PDGT  329 (683)
Q Consensus       256 iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~~~~~~~~i~~~~~~-~~~~  329 (683)
                      +||++..+...... .|.+.|....|.|....+++++.|..+++|=.+++.    .++.-  .+|..+..++.|. .++.
T Consensus       271 ~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R--~GHs~Pp~~irfy~~~g~  348 (910)
T KOG1539|consen  271 FWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSR--GGHSAPPSCIRFYGSQGH  348 (910)
T ss_pred             EEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeec--cCCCCCchheeeeccCcE
Confidence            99999988877665 788999999999999999999999998888544332    23333  3599999999998 6889


Q ss_pred             EEEEEECCCcEEEEECCCCceeeEEEe-----------------cCcceeceEEEEe-----cCCEEEEEecCCcEEEEe
Q psy15995        330 QLLTASGDKTCKLWDIETKSVVSEFIM-----------------GNQVEDQQVSCLW-----QGDYLLTVSLSGFISYLD  387 (683)
Q Consensus       330 ~l~~~~~dg~i~iwd~~~~~~~~~~~~-----------------~~~~~~~~~~~~~-----~~~~l~~~~~~g~i~~~~  387 (683)
                      .+.+++.|++++.+++.....-+++..                 ..-.+...+++..     ..+.+.+--.+...+.|+
T Consensus       349 ~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~  428 (910)
T KOG1539|consen  349 FILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWN  428 (910)
T ss_pred             EEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEe
Confidence            999999999999888753222111111                 0011222233322     234556666677899999


Q ss_pred             cCCCCcceeeee-----eccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceec--cCCCCcceeEEEEe--CCeE
Q psy15995        388 VNNPSTPIRVIK-----GHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQ--GAGHGNQINGMKAT--GELL  458 (683)
Q Consensus       388 ~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~--~~~~~~~v~~~~~~--~~~l  458 (683)
                      .++...-...+.     .....+++++.++.|++.+.|+..|.|-+|+++++-....+  ...|..+|++++.+  ++.+
T Consensus       429 ~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~  508 (910)
T KOG1539|consen  429 FRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLL  508 (910)
T ss_pred             ccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceE
Confidence            987433222222     13367999999999999999999999999999999887777  36799999999999  7889


Q ss_pred             EEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEE
Q psy15995        459 YTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAV  538 (683)
Q Consensus       459 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  538 (683)
                      ++++.+|.++.|++.+..                                     ....+.....+.++..+....++++
T Consensus       509 vsa~~~Gilkfw~f~~k~-------------------------------------l~~~l~l~~~~~~iv~hr~s~l~a~  551 (910)
T KOG1539|consen  509 VSAGADGILKFWDFKKKV-------------------------------------LKKSLRLGSSITGIVYHRVSDLLAI  551 (910)
T ss_pred             EEccCcceEEEEecCCcc-------------------------------------eeeeeccCCCcceeeeeehhhhhhh
Confidence            999999999999998753                                     2333445567788888888999999


Q ss_pred             EcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecC
Q psy15995        539 GGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSP  618 (683)
Q Consensus       539 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~  618 (683)
                      +.+|-.|.++|..+.+.. +...+|...|++++|||||++|++++.|++|++||+.++.++-...   -..+++++.|||
T Consensus       552 ~~ddf~I~vvD~~t~kvv-R~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~---vd~~~~sls~SP  627 (910)
T KOG1539|consen  552 ALDDFSIRVVDVVTRKVV-REFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL---VDSPCTSLSFSP  627 (910)
T ss_pred             hcCceeEEEEEchhhhhh-HHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe---cCCcceeeEECC
Confidence            999999999999998877 4445799999999999999999999999999999999999986554   468899999999


Q ss_pred             CCCeEEEeecC-CcEEEEeCCC
Q psy15995        619 DSALVASGSLD-TTIIIWSLAS  639 (683)
Q Consensus       619 d~~~l~~~~~d-~~v~iw~~~~  639 (683)
                      +|.+|||+..| .-|++|.=.+
T Consensus       628 ngD~LAT~Hvd~~gIylWsNks  649 (910)
T KOG1539|consen  628 NGDFLATVHVDQNGIYLWSNKS  649 (910)
T ss_pred             CCCEEEEEEecCceEEEEEchh
Confidence            99999999998 5799997443

>KOG2106|consensus

Probab=100.00  E-value=8.5e-43  Score=309.44  Aligned_cols=529  Identities=18%  Similarity=0.294  Sum_probs=393.9

Q ss_pred             EeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCC
Q psy15995         50 LGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIG  129 (683)
Q Consensus        50 ~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~  129 (683)
                      +-+-|-|..+.+. .+.+.++|.+...+. .+.||+..|.|++.+||.-++|+|...|+=       ++++         
T Consensus        71 ly~lptgE~vyfv-A~V~Vl~n~ee~~Qr-~y~GH~ddikc~~vHPdri~vatGQ~ag~~-------g~~~---------  132 (626)
T KOG2106|consen   71 LYLLPTGELVYFV-AAVGVLYNWEERSQR-HYLGHNDDIKCMAVHPDRIRVATGQGAGTS-------GRPL---------  132 (626)
T ss_pred             eEEccCccEEEEe-ccEEEEEeehhhhcc-cccCCCCceEEEeecCCceeeccCcccccC-------CCcC---------
Confidence            3356766665554 447788888665543 477999999999999999999988655521       1100         


Q ss_pred             CCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcC--CCCeEEEEecCC
Q psy15995        130 GPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSP--DNQRMVVVGEGR  207 (683)
Q Consensus       130 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~~~  207 (683)
                                                      .-.+++||..+...+..+-  .....|.+++|++  .|.++++...+.
T Consensus       133 --------------------------------~phvriWdsv~L~TL~V~g--~f~~GV~~vaFsk~~~G~~l~~vD~s~  178 (626)
T KOG2106|consen  133 --------------------------------QPHVRIWDSVTLSTLHVIG--FFDRGVTCVAFSKINGGSLLCAVDDSN  178 (626)
T ss_pred             --------------------------------CCeeeecccccceeeeeec--cccccceeeeecccCCCceEEEecCCC
Confidence                                            0235666654443332222  3347789999997  467888888888


Q ss_pred             ceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeec---cc-cccCeEEEEECCC
Q psy15995        208 ERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK---QE-HSRFVQAVRYSPS  283 (683)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~---~~-~~~~v~~~~~~~~  283 (683)
                      +....+|+|..+......+.....|....|+|.++.++++.+ .+.+.+|+.+.+.+....   .. ....|.|++|.++
T Consensus       179 ~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~G-k~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~en  257 (626)
T KOG2106|consen  179 PHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCG-KGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLEN  257 (626)
T ss_pred             ccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeC-CceEEEEEccCCceEEEeeccccccceEEEEEEEcCC
Confidence            888999999999999999999999999999999998555555 589999998877655432   22 2367999999999


Q ss_pred             CCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceec
Q psy15995        284 GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQ  363 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  363 (683)
                      |+ +++|..+|.|.||+..+.+..+...  +|.+.|.+++...+|.+ ++|+.|+.|..|| ..-+.++....+......
T Consensus       258 gd-viTgDS~G~i~Iw~~~~~~~~k~~~--aH~ggv~~L~~lr~Gtl-lSGgKDRki~~Wd-~~y~k~r~~elPe~~G~i  332 (626)
T KOG2106|consen  258 GD-VITGDSGGNILIWSKGTNRISKQVH--AHDGGVFSLCMLRDGTL-LSGGKDRKIILWD-DNYRKLRETELPEQFGPI  332 (626)
T ss_pred             CC-EEeecCCceEEEEeCCCceEEeEee--ecCCceEEEEEecCccE-eecCccceEEecc-ccccccccccCchhcCCe
Confidence            96 7899999999999988777776665  59999999999999875 5599999999999 444555555444433333


Q ss_pred             eEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCC
Q psy15995        364 QVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAG  443 (683)
Q Consensus       364 ~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~  443 (683)
                      .......++ +++|+..+.|..=.+.....  ....+|......++.+|+.+.+++++.|+.+++|+  ..+.....  .
T Consensus       333 Rtv~e~~~d-i~vGTtrN~iL~Gt~~~~f~--~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~--~  405 (626)
T KOG2106|consen  333 RTVAEGKGD-ILVGTTRNFILQGTLENGFT--LTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTK--I  405 (626)
T ss_pred             eEEecCCCc-EEEeeccceEEEeeecCCce--EEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEE--E
Confidence            332222333 88888888887777776444  34567899999999999999999999999999999  33333332  2


Q ss_pred             CCcceeEEEEe-CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCC
Q psy15995        444 HGNQINGMKAT-GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDY  522 (683)
Q Consensus       444 ~~~~v~~~~~~-~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  522 (683)
                      -..++.++.|+ ...++.|...|...+.|.++...                                     +.......
T Consensus       406 ~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~l-------------------------------------v~~~~d~~  448 (626)
T KOG2106|consen  406 IEDPAECADFHPSGVVAVGTATGRWFVLDTETQDL-------------------------------------VTIHTDNE  448 (626)
T ss_pred             ecCceeEeeccCcceEEEeeccceEEEEeccccee-------------------------------------EEEEecCC
Confidence            44556666666 33999999999999999887432                                     11111245


Q ss_pred             CCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCc-ceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccc
Q psy15995        523 EPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSP-KAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHN  601 (683)
Q Consensus       523 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~  601 (683)
                      ++++++++|+|.+||+|+.|+.|++|-+....... +...-+..+|+.+.||+|+++|.+-+-|-.|..|.....+....
T Consensus       449 ~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts  528 (626)
T KOG2106|consen  449 QLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITS  528 (626)
T ss_pred             ceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEccccCcccce
Confidence            78999999999999999999999999987654432 22223558999999999999999999999999994432221111


Q ss_pred             ---cc-------------eeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeE-eecCCCCCCeeEEEEc-cC
Q psy15995        602 ---KE-------------WGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHII-IKNAHPQSQITRLQWL-DN  663 (683)
Q Consensus       602 ---~~-------------~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~-~~~~~~~~~v~~l~~~-~~  663 (683)
                         ..             .+.|...|+.++-+.+.++||+|.+.|.|++|...-...... .+...|++.|++++|+ ++
T Consensus       529 ~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d  608 (626)
T KOG2106|consen  529 VKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKD  608 (626)
T ss_pred             ecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccCCCcccceeeccccceeEEEEEeeCC
Confidence               11             112556677788888999999999999999999875554432 2344579999999999 77


Q ss_pred             CeEEEeeCCCcEEEEee
Q psy15995        664 DLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       664 ~~l~s~~~d~~v~vw~~  680 (683)
                      ..|++.+.|.+|..|++
T Consensus       609 ~~li~tg~D~Si~qW~l  625 (626)
T KOG2106|consen  609 SHLISTGKDTSIMQWRL  625 (626)
T ss_pred             ceEEecCCCceEEEEEe
Confidence            78888889999999997

>KOG0272|consensus

Probab=100.00  E-value=1.8e-46  Score=325.41  Aligned_cols=280  Identities=23%  Similarity=0.358  Sum_probs=262.5

Q ss_pred             CCCeEEEeeCCCCCeEEEec-CCeEEEEeCCCCcccccccCcccceEEEEECCC--CcEEEEecCCCCEEEEeCCCcccc
Q psy15995         44 RGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPS--GFYIASGDISGKVRIWDTVNKEHI  120 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~~-~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d--~~~las~~~dg~i~iwd~~~~~~~  120 (683)
                      ...+..+.||+|++.||+++ +|.+.||+.++...+.+|.||+..|.++.|+|.  +..||||+.||++++|++.+...+
T Consensus       175 ~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l  254 (459)
T KOG0272|consen  175 TRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPL  254 (459)
T ss_pred             CCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcch
Confidence            34567788999999999995 899999999999999999999999999999996  679999999999999999999999


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeE
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRM  200 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  200 (683)
                      ..++.|.              ..|..++|.|+|++|++++.|.+-++||++++..+.  ...+|...|.+++|.|||..+
T Consensus       255 ~~l~gH~--------------~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL--~QEGHs~~v~~iaf~~DGSL~  318 (459)
T KOG0272|consen  255 QDLEGHL--------------ARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELL--LQEGHSKGVFSIAFQPDGSLA  318 (459)
T ss_pred             hhhhcch--------------hhheeeeecCCCceeeecccccchhhcccccchhhH--hhcccccccceeEecCCCcee
Confidence            9999987              789999999999999999999999999999998664  445788999999999999998


Q ss_pred             EEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEE
Q psy15995        201 VVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRY  280 (683)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~  280 (683)
                      ++++-+.  +.+||+..+|+++..+.+|.++|..++|+|+|-. +++|+.|++++|||++..+.+..+.+|.+-|+.+.|
T Consensus       319 ~tGGlD~--~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~-lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~  395 (459)
T KOG0272|consen  319 ATGGLDS--LGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYH-LATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKY  395 (459)
T ss_pred             eccCccc--hhheeecccCcEEEEecccccceeeEeECCCceE-EeecCCCCcEEEeeecccccceecccccchhhheEe
Confidence            8877664  4799999999999999999999999999999974 999999999999999999999999999999999999


Q ss_pred             CC-CCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEE
Q psy15995        281 SP-SGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWD  344 (683)
Q Consensus       281 ~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  344 (683)
                      +| .|.+|++++.|+++++|...+..+++.+.+  |.+.|.++..++|++.+++++.|+++++|.
T Consensus       396 ~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaG--He~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  396 SPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAG--HEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             cccCCeEEEEcccCcceeeecCCCcccchhhcC--CccceEEEEeccCCceEEEeccCceeeecc
Confidence            99 678999999999999999999999999987  999999999999999999999999999995

>KOG0272|consensus

Probab=100.00  E-value=4.2e-45  Score=316.94  Aligned_cols=283  Identities=22%  Similarity=0.351  Sum_probs=264.5

Q ss_pred             CcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeecc--ceEEEeec
Q psy15995         83 EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI--GFYIASGD  160 (683)
Q Consensus        83 ~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~  160 (683)
                      |.+.+|..+.||+|++.||||+-+|.++||+..+...+.++..|.              ..+.++.|+|.  +..+|+++
T Consensus       173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~--------------~~v~~~~fhP~~~~~~lat~s  238 (459)
T KOG0272|consen  173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHT--------------SRVGAAVFHPVDSDLNLATAS  238 (459)
T ss_pred             cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccc--------------cceeeEEEccCCCccceeeec
Confidence            678899999999999999999999999999999999999998887              88999999997  66999999


Q ss_pred             CCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecC
Q psy15995        161 ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPS  240 (683)
Q Consensus       161 ~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  240 (683)
                      .||++++|++++.+.+  ..+.+|...|..++|+|+|++|++++.+..  .++|+..++..+....||...|.+++|.|+
T Consensus       239 ~Dgtvklw~~~~e~~l--~~l~gH~~RVs~VafHPsG~~L~TasfD~t--WRlWD~~tk~ElL~QEGHs~~v~~iaf~~D  314 (459)
T KOG0272|consen  239 ADGTVKLWKLSQETPL--QDLEGHLARVSRVAFHPSGKFLGTASFDST--WRLWDLETKSELLLQEGHSKGVFSIAFQPD  314 (459)
T ss_pred             cCCceeeeccCCCcch--hhhhcchhhheeeeecCCCceeeecccccc--hhhcccccchhhHhhcccccccceeEecCC
Confidence            9999999999987755  456678899999999999999999998865  799999999999999999999999999999


Q ss_pred             CCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeE
Q psy15995        241 RPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVY  320 (683)
Q Consensus       241 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~  320 (683)
                      |.. +++|+.|..-+|||+++++++..+.+|..+|.+++|+|+|..||||+.|++++|||++....+..+.  +|..-|.
T Consensus       315 GSL-~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ip--AH~nlVS  391 (459)
T KOG0272|consen  315 GSL-AATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIP--AHSNLVS  391 (459)
T ss_pred             Cce-eeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecc--cccchhh
Confidence            994 9999999999999999999999999999999999999999999999999999999999998888875  5999999


Q ss_pred             EEEEcc-CCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeee
Q psy15995        321 AVAWKP-DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIK  399 (683)
Q Consensus       321 ~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~  399 (683)
                      .+.|+| .|.+|++++.|+++++|...+.+++                                            +.+.
T Consensus       392 ~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~--------------------------------------------ksLa  427 (459)
T KOG0272|consen  392 QVKYSPQEGYFLVTASYDNTVKIWSTRTWSPL--------------------------------------------KSLA  427 (459)
T ss_pred             heEecccCCeEEEEcccCcceeeecCCCcccc--------------------------------------------hhhc
Confidence            999998 7899999999999999998876654                                            4568


Q ss_pred             eccccEEEEEEeCCCCEEEEEeCCCcEEEEc
Q psy15995        400 GHNKPITALALSPDRGTVFTGSHDGFITRWN  430 (683)
Q Consensus       400 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~  430 (683)
                      +|.+.|.++.+++|+..+++++.|.++++|.
T Consensus       428 GHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  428 GHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             CCccceEEEEeccCCceEEEeccCceeeecc
Confidence            9999999999999999999999999999996

>KOG0286|consensus

Probab=100.00  E-value=2.7e-43  Score=290.78  Aligned_cols=292  Identities=22%  Similarity=0.342  Sum_probs=261.5

Q ss_pred             cccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEE
Q psy15995         78 SDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIA  157 (683)
Q Consensus        78 ~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  157 (683)
                      .++|+||.+.|.++.|++|.++|++++.||.+.|||.-+.....-++...              ..|-..+|+|.|+++|
T Consensus        48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s--------------~WVMtCA~sPSg~~VA  113 (343)
T KOG0286|consen   48 RRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPS--------------SWVMTCAYSPSGNFVA  113 (343)
T ss_pred             EEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCc--------------eeEEEEEECCCCCeEE
Confidence            36799999999999999999999999999999999998887666655554              7899999999999999


Q ss_pred             eecCCccEEEEecccc----ceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeE
Q psy15995        158 SGDISGKVRIWDTVNK----EHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPIN  233 (683)
Q Consensus       158 ~~~~d~~i~iwd~~~~----~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  233 (683)
                      +|+-|+...||++.+.    .......+.+|.+-+.++.|.+|++ |++++++.  ...+|+.++++.+..+.+|.+.|.
T Consensus       114 cGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~-ilT~SGD~--TCalWDie~g~~~~~f~GH~gDV~  190 (343)
T KOG0286|consen  114 CGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNH-ILTGSGDM--TCALWDIETGQQTQVFHGHTGDVM  190 (343)
T ss_pred             ecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCCCc-eEecCCCc--eEEEEEcccceEEEEecCCcccEE
Confidence            9999999999999854    2234556889999999999999665 44544443  368999999999999999999999


Q ss_pred             EEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC
Q psy15995        234 SCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP  313 (683)
Q Consensus       234 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~  313 (683)
                      +++++|.....+++|+.|+..++||++.+..++.+.+|...|++++|.|+|.-+++|+.|++.++||++..+.+..+..+
T Consensus       191 slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~  270 (343)
T KOG0286|consen  191 SLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHD  270 (343)
T ss_pred             EEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccC
Confidence            99999944446999999999999999999999999999999999999999999999999999999999999999988876


Q ss_pred             ccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCc
Q psy15995        314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPST  393 (683)
Q Consensus       314 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~  393 (683)
                      ....+|++++|+..|++|++|..|..+.+||.-.++.+                                          
T Consensus       271 ~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~v------------------------------------------  308 (343)
T KOG0286|consen  271 SIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERV------------------------------------------  308 (343)
T ss_pred             cccCCceeEEEcccccEEEeeecCCceeEeeccccceE------------------------------------------
Confidence            67889999999999999999999999999998766544                                          


Q ss_pred             ceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEc
Q psy15995        394 PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN  430 (683)
Q Consensus       394 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~  430 (683)
                        ..+.+|...|+++..+|||..+++|+.|..+++|.
T Consensus       309 --g~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  309 --GVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             --EEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence              34578999999999999999999999999999994

>KOG0315|consensus

Probab=100.00  E-value=8.3e-42  Score=275.15  Aligned_cols=292  Identities=23%  Similarity=0.356  Sum_probs=246.5

Q ss_pred             CCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee--EEeccCCccccC
Q psy15995        241 RPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL--VSELGNPAHKGG  318 (683)
Q Consensus       241 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~~~  318 (683)
                      .+-+|++++.|.+|++|...+|.+..+++.....|..+.+.|+++.||+++ ...|++||++++..  +..+.  +|...
T Consensus         9 ~~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~np~Pv~t~e--~h~kN   85 (311)
T KOG0315|consen    9 DPVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSNNPNPVATFE--GHTKN   85 (311)
T ss_pred             CceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhcc-CCeeEEEEccCCCCCceeEEe--ccCCc
Confidence            334799999999999999999999999998889999999999999999988 56899999998865  55554  49999


Q ss_pred             eEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeee
Q psy15995        319 VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI  398 (683)
Q Consensus       319 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~  398 (683)
                      |+++.|..+|+.+++|++||+++|||++.....+.                                             
T Consensus        86 VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~---------------------------------------------  120 (311)
T KOG0315|consen   86 VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRN---------------------------------------------  120 (311)
T ss_pred             eEEEEEeecCeEEEecCCCceEEEEeccCcccchh---------------------------------------------
Confidence            99999999999999999999999999998443322                                             


Q ss_pred             eeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCccc
Q psy15995        399 KGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYS  478 (683)
Q Consensus       399 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~  478 (683)
                      ..|..+|+++..+|+...|++|..+|.|++||+.............                                  
T Consensus       121 ~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~----------------------------------  166 (311)
T KOG0315|consen  121 YQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPED----------------------------------  166 (311)
T ss_pred             ccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCC----------------------------------
Confidence            2367899999999999999999999999999998776544432211                                  


Q ss_pred             CCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcc
Q psy15995        479 GPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPK  558 (683)
Q Consensus       479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~  558 (683)
                                                                ...+.++.+.|||.+|+.+...|..++|++.+.+....
T Consensus       167 ------------------------------------------~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~  204 (311)
T KOG0315|consen  167 ------------------------------------------DTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASE  204 (311)
T ss_pred             ------------------------------------------CcceeeEEEcCCCcEEEEecCCccEEEEEccCCCcccc
Confidence                                                      12467889999999999999999999999977543322


Q ss_pred             e-----eecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEE
Q psy15995        559 A-----ELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTII  633 (683)
Q Consensus       559 ~-----~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~  633 (683)
                      +     ...|.+.+..+.+|||+++||+++.|.+++||+.++. +.......+|+..+...+||.||+||++|+.|+.++
T Consensus       205 l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~-~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~r  283 (311)
T KOG0315|consen  205 LEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF-FKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTAR  283 (311)
T ss_pred             ceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc-eeeEEEeecCCceEEeeeeccCccEEEecCCCCcee
Confidence            2     1248999999999999999999999999999999988 444556667999999999999999999999999999


Q ss_pred             EEeCCCCceeeEeecCCCCCCeeEEE
Q psy15995        634 IWSLASPAKHIIIKNAHPQSQITRLQ  659 (683)
Q Consensus       634 iw~~~~~~~~~~~~~~~~~~~v~~l~  659 (683)
                      +|+++.++.+....+ || ....+++
T Consensus       284 lW~~~~~k~v~qy~g-h~-K~~vc~~  307 (311)
T KOG0315|consen  284 LWDLSAGKEVRQYQG-HH-KAAVCVA  307 (311)
T ss_pred             ecccccCceeeecCC-cc-cccEEEE
Confidence            999999998888865 33 4444444

>KOG0276|consensus

Probab=100.00  E-value=4e-40  Score=300.27  Aligned_cols=480  Identities=17%  Similarity=0.267  Sum_probs=357.5

Q ss_pred             ccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEe
Q psy15995         79 DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIAS  158 (683)
Q Consensus        79 ~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  158 (683)
                      +.+..|+..|.++.|.|...++.++-.+|.|.|||.++..++..++...              .+|+...|-+.-+++++
T Consensus         7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~--------------~PvRa~kfiaRknWiv~   72 (794)
T KOG0276|consen    7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSE--------------VPVRAAKFIARKNWIVT   72 (794)
T ss_pred             hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecc--------------cchhhheeeeccceEEE
Confidence            4466799999999999999999999999999999999999998888776              77888899999999999


Q ss_pred             ecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCC-CceeeeecCCcCeEEEEe
Q psy15995        159 GDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG-TSVGEISGQSKPINSCDF  237 (683)
Q Consensus       159 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~  237 (683)
                      |+.|..|+||+.++++.+  ..+.+|..-|.+++.+|...++++++++  ..+.+|+|+.+ .+..++.+|..-|.+++|
T Consensus        73 GsDD~~IrVfnynt~ekV--~~FeAH~DyIR~iavHPt~P~vLtsSDD--m~iKlW~we~~wa~~qtfeGH~HyVMqv~f  148 (794)
T KOG0276|consen   73 GSDDMQIRVFNYNTGEKV--KTFEAHSDYIRSIAVHPTLPYVLTSSDD--MTIKLWDWENEWACEQTFEGHEHYVMQVAF  148 (794)
T ss_pred             ecCCceEEEEecccceee--EEeeccccceeeeeecCCCCeEEecCCc--cEEEEeeccCceeeeeEEcCcceEEEEEEe
Confidence            999999999999999865  5677888999999999999999988766  45899999976 567789999999999999


Q ss_pred             ecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCC--CEEEEEcCCCcEEEEeCCCCeeEEeccCCcc
Q psy15995        238 KPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSG--SHFASAGFDGKVFLYDGASADLVSELGNPAH  315 (683)
Q Consensus       238 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~  315 (683)
                      +|.++..+++++-|++|++|.+....+..++.+|...|+|+.|-+.|  .+|++|+.|..+++||.++..+++++.+  |
T Consensus       149 nPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeG--H  226 (794)
T KOG0276|consen  149 NPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEG--H  226 (794)
T ss_pred             cCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhc--c
Confidence            99999899999999999999999999999999999999999998866  4999999999999999999999999986  9


Q ss_pred             ccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcce
Q psy15995        316 KGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPI  395 (683)
Q Consensus       316 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~  395 (683)
                      ...|..+.|+|.-..+++|++||+++||+..+-+....+                                         
T Consensus       227 t~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tL-----------------------------------------  265 (794)
T KOG0276|consen  227 TNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTL-----------------------------------------  265 (794)
T ss_pred             cccceEEEecCCCcEEEEecCCccEEEecCcceehhhhh-----------------------------------------
Confidence            999999999999999999999999999998876654332                                         


Q ss_pred             eeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCC
Q psy15995        396 RVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSN  475 (683)
Q Consensus       396 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~  475 (683)
                         .-.-++++|++-.+.++.++.|..+|.|.+ .+..           ..+..++...++.+.+..  +.|.--++.+-
T Consensus       266 ---n~gleRvW~I~~~k~~~~i~vG~Deg~i~v-~lgr-----------eeP~vsMd~~gKIiwa~~--~ei~~~~~ks~  328 (794)
T KOG0276|consen  266 ---NYGLERVWCIAAHKGDGKIAVGFDEGSVTV-KLGR-----------EEPAVSMDSNGKIIWAVH--SEIQAVNLKSV  328 (794)
T ss_pred             ---hcCCceEEEEeecCCCCeEEEeccCCcEEE-EccC-----------CCCceeecCCccEEEEcC--ceeeeeeceec
Confidence               223456888888887778888877776543 2222           223333333333333322  12222222211


Q ss_pred             cccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCcc
Q psy15995        476 AYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSL  555 (683)
Q Consensus       476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  555 (683)
                      ....            ....+..+....+     +    +  -.....+..++.+|+|+++++++ ||.-.||..-.-+.
T Consensus       329 ~~~~------------ev~DgErL~LsvK-----e----L--gs~eiyPq~L~hsPNGrfV~Vcg-dGEyiIyTala~Rn  384 (794)
T KOG0276|consen  329 GAQK------------EVTDGERLPLSVK-----E----L--GSVEIYPQTLAHSPNGRFVVVCG-DGEYIIYTALALRN  384 (794)
T ss_pred             cCcc------------cccCCccccchhh-----h----c--cccccchHHhccCCCCcEEEEec-CccEEEEEeeehhh
Confidence            1000            0000000000000     0    0  00123456788999999888765 67778886432211


Q ss_pred             CcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEE
Q psy15995        556 SPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIW  635 (683)
Q Consensus       556 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw  635 (683)
                            ...+.-....|++|....++-.+++.|+++  ++++.........+      ...--.|.+|...+ ++.+++|
T Consensus       385 ------K~fG~~~eFvw~~dsne~avRes~~~vki~--knfke~ksi~~~~~------~e~i~gg~Llg~~s-s~~~~fy  449 (794)
T KOG0276|consen  385 ------KAFGSGLEFVWAADSNEFAVRESNGNVKIF--KNFKEHKSIRPDMS------AEGIFGGPLLGVRS-SDFLCFY  449 (794)
T ss_pred             ------cccccceeEEEcCCCCeEEEEecCCceEEE--ecceeccccccccc------eeeecCCceEEEEe-CCeEEEE
Confidence                  134556678899998888888888999998  56555443332211      11112355565555 5569999


Q ss_pred             eCCCCceeeEeecCCCCCCeeEEEEccCCeEEEeeCCCcEEEEee
Q psy15995        636 SLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~v~vw~~  680 (683)
                      |-++++.+.++..     ....+.|+|++.|+..+.|.+..+..+
T Consensus       450 dW~~~~lVrrI~v-----~~k~v~w~d~g~lVai~~d~Sfyil~~  489 (794)
T KOG0276|consen  450 DWESGELVRRIEV-----TSKHVYWSDNGELVAIAGDDSFYILKF  489 (794)
T ss_pred             EcccceEEEEEee-----ccceeEEecCCCEEEEEecCceeEEEe
Confidence            9999999988854     346899997777776666666555544

>KOG1539|consensus

Probab=100.00  E-value=1e-38  Score=301.23  Aligned_cols=556  Identities=18%  Similarity=0.253  Sum_probs=418.6

Q ss_pred             EEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceee
Q psy15995         59 FLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTL  138 (683)
Q Consensus        59 l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  138 (683)
                      +.++-|+...+||.+.-.++..-+.+...|+|++-..  .++.+++. ..|.+|..... .......|.           
T Consensus        50 vtt~vgksfqvYd~~kl~ll~vs~~lp~~I~alas~~--~~vy~A~g-~~i~~~~rgk~-i~~~~~~~~-----------  114 (910)
T KOG1539|consen   50 VTTCVGKSFQVYDVNKLNLLFVSKPLPDKITALASDK--DYVYVASG-NKIYAYARGKH-IRHTTLLHG-----------  114 (910)
T ss_pred             EEEecCceEEEEeccceEEEEecCCCCCceEEEEecC--ceEEEecC-cEEEEEEccce-EEEEecccc-----------
Confidence            3344689999999999998887778999999999544  45555543 35777754321 111111121           


Q ss_pred             eeecceeeeEeeccceEEEeecCCccEEEEecccc-cee-eeccccccCC-CeeEEEEcCCC--CeEEEEecCCceEEEE
Q psy15995        139 LSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNK-EHI-LKNEFHPIGG-PIKDIAWSPDN--QRMVVVGEGRERFGHV  213 (683)
Q Consensus       139 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~-~~~-~~~~~~~~~~-~i~~~~~s~~~--~~l~~~~~~~~~~~~~  213 (683)
                         ..|.  -..+-|.++.++..++.+.+|+...+ +.. ....+....+ .|+++. +|.-  +.++++...+.  ..+
T Consensus       115 ---a~v~--~l~~fGe~lia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~~~Ital~-HP~TYLNKIvvGs~~G~--lql  186 (910)
T KOG1539|consen  115 ---AKVH--LLLPFGEHLIAVDISNILFVWKTSSIQEELYLQSTFLKVEGDFITALL-HPSTYLNKIVVGSSQGR--LQL  186 (910)
T ss_pred             ---ceEE--EEeeecceEEEEEccCcEEEEEeccccccccccceeeeccCCceeeEe-cchhheeeEEEeecCCc--EEE
Confidence               1222  23456889999999999999999884 221 1112222222 266654 4432  33444443332  789


Q ss_pred             EEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCC-EEEEEcC
Q psy15995        214 FMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGS-HFASAGF  292 (683)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~  292 (683)
                      |+.++++.+.+++++...|+++.-+|-=. .++.|..+|+|.+++++..+.+.+++...+.|++++|.-||+ .+++++.
T Consensus       187 ~Nvrt~K~v~~f~~~~s~IT~ieqsPaLD-VVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~  265 (910)
T KOG1539|consen  187 WNVRTGKVVYTFQEFFSRITAIEQSPALD-VVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRS  265 (910)
T ss_pred             EEeccCcEEEEecccccceeEeccCCcce-EEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccC
Confidence            99999999999999999999999999877 599999999999999999999999986679999999999998 6677777


Q ss_pred             CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCc---eeeEEEecCcceeceEEEE-
Q psy15995        293 DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKS---VVSEFIMGNQVEDQQVSCL-  368 (683)
Q Consensus       293 dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~-  368 (683)
                      .|.+.+||++..+.+..+.. .|.+.|....|.|....+++.+.|+.+++|=..++.   .+.++..++..+..++.+. 
T Consensus       266 ~G~m~~wDLe~kkl~~v~~n-ah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~  344 (910)
T KOG1539|consen  266 NGDMAFWDLEKKKLINVTRN-AHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYG  344 (910)
T ss_pred             CceEEEEEcCCCeeeeeeec-cccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeec
Confidence            89999999999888877763 588999999999999999999999999988666443   2344556677777777777 


Q ss_pred             ecCCEEEEEecCCcEEEEecCCCCcc--------------ee---eeeeccccEEEEEEeCC-----CCEEEEEeCCCcE
Q psy15995        369 WQGDYLLTVSLSGFISYLDVNNPSTP--------------IR---VIKGHNKPITALALSPD-----RGTVFTGSHDGFI  426 (683)
Q Consensus       369 ~~~~~l~~~~~~g~i~~~~~~~~~~~--------------~~---~~~~~~~~v~~~~~~~~-----~~~l~~~~~dg~i  426 (683)
                      .++..+..+..|+.++.+++......              ..   ...-.-.+|..+++...     .+.++..-.+...
T Consensus       345 ~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~  424 (910)
T KOG1539|consen  345 SQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSA  424 (910)
T ss_pred             cCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceE
Confidence            57889999999999998887532110              00   01112235666666542     2455555567789


Q ss_pred             EEEcCCCCCcce-eccCC----CCcceeEEEE--eCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEE
Q psy15995        427 TRWNAKTGENDR-VQGAG----HGNQINGMKA--TGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLV  499 (683)
Q Consensus       427 ~~w~~~~~~~~~-~~~~~----~~~~v~~~~~--~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (683)
                      +.|+.++...-+ .+...    ....+++++.  +|+..+.|.+.|.|.+++++++-......                 
T Consensus       425 ~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~-----------------  487 (910)
T KOG1539|consen  425 YTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFG-----------------  487 (910)
T ss_pred             EEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccc-----------------
Confidence            999998766522 22211    2344555444  49999999999999999999863211110                 


Q ss_pred             EEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEE
Q psy15995        500 TVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYL  579 (683)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  579 (683)
                                      ....+..+++.++...-++.+++++.+|.+.+||..+..+.....  -...++++..+.....+
T Consensus       488 ----------------~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~--l~~~~~~iv~hr~s~l~  549 (910)
T KOG1539|consen  488 ----------------DSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLR--LGSSITGIVYHRVSDLL  549 (910)
T ss_pred             ----------------cCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeec--cCCCcceeeeeehhhhh
Confidence                            122466789999999999999999999999999999888664444  45678889999989999


Q ss_pred             EEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEE
Q psy15995        580 VASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQ  659 (683)
Q Consensus       580 ~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~  659 (683)
                      +.+.+|-.|+++|..+.+....  +.+|.+.|++++|||||++|++++.|++|++||+.++..+-.+..   ..+.+++.
T Consensus       550 a~~~ddf~I~vvD~~t~kvvR~--f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~v---d~~~~sls  624 (910)
T KOG1539|consen  550 AIALDDFSIRVVDVVTRKVVRE--FWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLV---DSPCTSLS  624 (910)
T ss_pred             hhhcCceeEEEEEchhhhhhHH--hhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEec---CCcceeeE
Confidence            9999999999999999888754  344999999999999999999999999999999999998887765   67899999


Q ss_pred             Ec-cCCeEEEeeCC-CcEEEEe
Q psy15995        660 WL-DNDLLVSVGQD-CNTKIWE  679 (683)
Q Consensus       660 ~~-~~~~l~s~~~d-~~v~vw~  679 (683)
                      |+ .+++|+|+..| .-|.+|.
T Consensus       625 ~SPngD~LAT~Hvd~~gIylWs  646 (910)
T KOG1539|consen  625 FSPNGDFLATVHVDQNGIYLWS  646 (910)
T ss_pred             ECCCCCEEEEEEecCceEEEEE
Confidence            99 77899999988 5689995

>KOG0279|consensus

Probab=100.00  E-value=1.8e-40  Score=272.33  Aligned_cols=294  Identities=23%  Similarity=0.355  Sum_probs=249.5

Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcC-----CCCceeeeccccccCeEEEEECCCCCEEEEEcCCCc
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG-----PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGK  295 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  295 (683)
                      ....+++|.+.|+.++..+.++..+++++.|.++.+|++     +.|..++.+.+|+..|..+..++||++.++++.|+.
T Consensus         7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~   86 (315)
T KOG0279|consen    7 LRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGT   86 (315)
T ss_pred             eeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccce
Confidence            445789999999999999998888999999999999975     456678899999999999999999999999999999


Q ss_pred             EEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEE
Q psy15995        296 VFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLL  375 (683)
Q Consensus       296 i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  375 (683)
                      +++||+.+++..+.+..  |...|.+++|++|++.+++|+.|++|++|+.-........                     
T Consensus        87 lrlWDl~~g~~t~~f~G--H~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~---------------------  143 (315)
T KOG0279|consen   87 LRLWDLATGESTRRFVG--HTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIH---------------------  143 (315)
T ss_pred             EEEEEecCCcEEEEEEe--cCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEe---------------------
Confidence            99999999999998876  9999999999999999999999999999998754332111                     


Q ss_pred             EEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCC--CCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEE
Q psy15995        376 TVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPD--RGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKA  453 (683)
Q Consensus       376 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~  453 (683)
                                            -..+.+.|.|++|+|+  ..++++++.|++|++||+++.+....+ .+|..       
T Consensus       144 ----------------------~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~-~gh~~-------  193 (315)
T KOG0279|consen  144 ----------------------EDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTF-IGHSG-------  193 (315)
T ss_pred             ----------------------cCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhcc-ccccc-------
Confidence                                  0123778999999998  689999999999999999988776655 23332       


Q ss_pred             eCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCC
Q psy15995        454 TGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEH  533 (683)
Q Consensus       454 ~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  533 (683)
                                                                                           .++.+++||||
T Consensus       194 ---------------------------------------------------------------------~v~t~~vSpDG  204 (315)
T KOG0279|consen  194 ---------------------------------------------------------------------YVNTVTVSPDG  204 (315)
T ss_pred             ---------------------------------------------------------------------cEEEEEECCCC
Confidence                                                                                 35678999999


Q ss_pred             CEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceee--e----
Q psy15995        534 GLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGF--H----  607 (683)
Q Consensus       534 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~--h----  607 (683)
                      .+.++|+.||.+.+||+..++..  ..+++...|.+++|+|+..+|+.+. +..|+|||+.++..+.......  .    
T Consensus       205 slcasGgkdg~~~LwdL~~~k~l--ysl~a~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v~~l~~d~~g~s~~~  281 (315)
T KOG0279|consen  205 SLCASGGKDGEAMLWDLNEGKNL--YSLEAFDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVVEELKLDGIGPSSKA  281 (315)
T ss_pred             CEEecCCCCceEEEEEccCCcee--EeccCCCeEeeEEecCCceeEeecc-CCceEEEeccchhhhhhcccccccccccc
Confidence            99999999999999999998874  5567999999999999987777665 4559999999988765543321  1    


Q ss_pred             -cccEEEEEecCCCCeEEEeecCCcEEEEeCCC
Q psy15995        608 -SAKVNCVAWSPDSALVASGSLDTTIIIWSLAS  639 (683)
Q Consensus       608 -~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~  639 (683)
                       .....+++||+||..|+.|..|+.|++|.+..
T Consensus       282 ~~~~clslaws~dG~tLf~g~td~~irv~qv~~  314 (315)
T KOG0279|consen  282 GDPICLSLAWSADGQTLFAGYTDNVIRVWQVAK  314 (315)
T ss_pred             CCcEEEEEEEcCCCcEEEeeecCCcEEEEEeec
Confidence             23467899999999999999999999998753

>KOG0286|consensus

Probab=100.00  E-value=1.5e-40  Score=274.62  Aligned_cols=287  Identities=28%  Similarity=0.438  Sum_probs=252.2

Q ss_pred             eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCC
Q psy15995        223 GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGA  302 (683)
Q Consensus       223 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  302 (683)
                      +.+++|..+|.++.|+++.+. +++++.||.+.|||.-+....+.+.-....|..++|+|.|+++|+|+-|+...||++.
T Consensus        49 r~LkGH~~Ki~~~~ws~Dsr~-ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls  127 (343)
T KOG0286|consen   49 RTLKGHLNKIYAMDWSTDSRR-IVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLS  127 (343)
T ss_pred             EEecccccceeeeEecCCcCe-EEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecc
Confidence            678999999999999999995 9999999999999999988888888889999999999999999999999999999998


Q ss_pred             CC------eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEE
Q psy15995        303 SA------DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLT  376 (683)
Q Consensus       303 ~~------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  376 (683)
                      +.      ...+.+  ++|.+.+.++.|.+| ..|++++.|.+..+||+++++.++.                       
T Consensus       128 ~~d~~g~~~v~r~l--~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~~~~~-----------------------  181 (343)
T KOG0286|consen  128 TRDAEGNVRVSREL--AGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQQTQV-----------------------  181 (343)
T ss_pred             cccccccceeeeee--cCccceeEEEEEcCC-CceEecCCCceEEEEEcccceEEEE-----------------------
Confidence            55      233344  459999999999975 5689999999999999999887654                       


Q ss_pred             EecCCcEEEEecCCCCcceeeeeeccccEEEEEEeC-CCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeC
Q psy15995        377 VSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSP-DRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATG  455 (683)
Q Consensus       377 ~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~  455 (683)
                                           +.+|.+.|.++.++| +++.+++|+-|+..++||++.+...+.+ .+|..         
T Consensus       182 ---------------------f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF-~ghes---------  230 (343)
T KOG0286|consen  182 ---------------------FHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTF-EGHES---------  230 (343)
T ss_pred             ---------------------ecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEee-ccccc---------
Confidence                                 468999999999999 9999999999999999999999887777 34443         


Q ss_pred             CeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCE
Q psy15995        456 ELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGL  535 (683)
Q Consensus       456 ~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  535 (683)
                                                                                         .|+++.|.|+|.-
T Consensus       231 -------------------------------------------------------------------DINsv~ffP~G~a  243 (343)
T KOG0286|consen  231 -------------------------------------------------------------------DINSVRFFPSGDA  243 (343)
T ss_pred             -------------------------------------------------------------------ccceEEEccCCCe
Confidence                                                                               4677888899999


Q ss_pred             EEEEcCCCcEEEEEcCCCccCcceeec-CCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEE
Q psy15995        536 VAVGGADSKVHIYELNNKSLSPKAELD-HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCV  614 (683)
Q Consensus       536 l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~  614 (683)
                      +++|++|++.++||++..+.+..+... ...+|++++||..|++|++|..|.++.+||.-.++...  .+.+|...|+++
T Consensus       244 fatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg--~L~GHeNRvScl  321 (343)
T KOG0286|consen  244 FATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVG--VLAGHENRVSCL  321 (343)
T ss_pred             eeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEE--EeeccCCeeEEE
Confidence            999999999999999887766444422 45689999999999999999999999999998888764  444699999999


Q ss_pred             EecCCCCeEEEeecCCcEEEEe
Q psy15995        615 AWSPDSALVASGSLDTTIIIWS  636 (683)
Q Consensus       615 ~~s~d~~~l~~~~~d~~v~iw~  636 (683)
                      ..+|||.-|++|+.|.+++||.
T Consensus       322 ~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  322 GVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             EECCCCcEEEecchhHheeecC
Confidence            9999999999999999999994

>KOG1063|consensus

Probab=100.00  E-value=8.3e-39  Score=295.44  Aligned_cols=569  Identities=17%  Similarity=0.235  Sum_probs=403.9

Q ss_pred             CCCCceeeecccceeecCCCcccCCCeEEEeeCCCCC---eEEEe-cCCeEEEEeCCCCcc--cccccCcccceEEEEEC
Q psy15995         21 PKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGK---NFLYT-NGNSVIIRNIENPAI--SDIYTEHSCAVNVAKYS   94 (683)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~---~l~~~-~~~~i~v~~~~~~~~--~~~~~~h~~~v~~~~~s   94 (683)
                      +.+.......+.+.........+...+.|+.+-|+.+   ++++| .|+.|.+|.++....  +..+++|...+.|+.  
T Consensus        31 Ga~~~Iav~dp~k~~i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv~--  108 (764)
T KOG1063|consen   31 GAGPAIAVADPEKILIVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCVV--  108 (764)
T ss_pred             cCCceEEEeCcccceeEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEeecCcceeEEEEE--
Confidence            3455556665666655555666788999999999888   55555 799999999985443  445667776665554  


Q ss_pred             CCCcEEEEecCCCCEEEEeCCCcc--cccccccccCCCCcccceeeeeecceeeeEeecc-ce-EEEeecCCccEEEEec
Q psy15995         95 PSGFYIASGDISGKVRIWDTVNKE--HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI-GF-YIASGDISGKVRIWDT  170 (683)
Q Consensus        95 ~d~~~las~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~-~l~~~~~d~~i~iwd~  170 (683)
                      ..-........|+.+.+||.+..+  +...+.+...            ..-..++++.++ +. .+|.|+.+..|.++.-
T Consensus       109 a~~~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k------------~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~  176 (764)
T KOG1063|consen  109 ARSSVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIK------------EAIPLCLAALKNNKTFLLACGGSKFVVDLYSS  176 (764)
T ss_pred             eeeeEEEeeccCceEEEeecCCCceeeehheehhhh------------hHhhHHHhhhccCCcEEEEecCcceEEEEecc
Confidence            433333334789999999996555  2222222110            023456666663 33 5677888888999988


Q ss_pred             cccceeeeccccccCCCeeEEEEcCCCC-eEEEEecCCceEEEEEEccCCC---------------------ce------
Q psy15995        171 VNKEHILKNEFHPIGGPIKDIAWSPDNQ-RMVVVGEGRERFGHVFMSETGT---------------------SV------  222 (683)
Q Consensus       171 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~~~~~~~~~~~~~~~~---------------------~~------  222 (683)
                      ...+......+.+|...|.+++|...+. .+.+++.+.+..+++|....+.                     ..      
T Consensus       177 ~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~  256 (764)
T KOG1063|consen  177 SADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYR  256 (764)
T ss_pred             CCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEE
Confidence            7777777788999999999999998766 7777777778888888765222                     11      


Q ss_pred             ----eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC--ceeee-----ccccccCeEEEEECCCCCEEEEEc
Q psy15995        223 ----GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF--KFKMT-----KQEHSRFVQAVRYSPSGSHFASAG  291 (683)
Q Consensus       223 ----~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~  291 (683)
                          ..+.||.+.|.++.|+|.+. .|++++.|.++.+|...+.  -.+..     ..+.........|+|+++.+++-+
T Consensus       257 is~eall~GHeDWV~sv~W~p~~~-~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g  335 (764)
T KOG1063|consen  257 ISFEALLMGHEDWVYSVWWHPEGL-DLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHG  335 (764)
T ss_pred             EehhhhhcCcccceEEEEEccchh-hheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEec
Confidence                12349999999999999996 4999999999999975443  22222     223445688899999999999999


Q ss_pred             CCCcEEEEeCCC-CeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCC-ceeeEEEe--cCcceeceEEE
Q psy15995        292 FDGKVFLYDGAS-ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETK-SVVSEFIM--GNQVEDQQVSC  367 (683)
Q Consensus       292 ~dg~i~iw~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~--~~~~~~~~~~~  367 (683)
                      ..|..++|..++ ..........+|...|.+++|+|.|.+|++.+.|.+-|++-.-.. ..-.++..  -+.....++++
T Consensus       336 ~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~  415 (764)
T KOG1063|consen  336 RTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSF  415 (764)
T ss_pred             ccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeeh
Confidence            999999998332 334444444569999999999999999999999999999876522 22222221  13334445555


Q ss_pred             EecCCEEEEEecCCcEEEEecCC-------------------------------------------C-------------
Q psy15995        368 LWQGDYLLTVSLSGFISYLDVNN-------------------------------------------P-------------  391 (683)
Q Consensus       368 ~~~~~~l~~~~~~g~i~~~~~~~-------------------------------------------~-------------  391 (683)
                      .+....+++|.....+++|+...                                           +             
T Consensus       416 vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~  495 (764)
T KOG1063|consen  416 VNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAA  495 (764)
T ss_pred             ccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeeccccc
Confidence            55555666666666777766532                                           0             


Q ss_pred             -------------------CcceeeeeeccccEEEEEEeCCCCEEEEEeCCC-----cEEEEcCCCCCcceeccCCCCcc
Q psy15995        392 -------------------STPIRVIKGHNKPITALALSPDRGTVFTGSHDG-----FITRWNAKTGENDRVQGAGHGNQ  447 (683)
Q Consensus       392 -------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~w~~~~~~~~~~~~~~~~~~  447 (683)
                                         ...++.+.+|...|.+++.+|+++.+|+++...     .|++|+..+-.....+ ..|   
T Consensus       496 ~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L-~~H---  571 (764)
T KOG1063|consen  496 APCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQEL-EGH---  571 (764)
T ss_pred             CchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhhee-ccc---
Confidence                               001223567888999999999999999988654     4788887665554432 223   


Q ss_pred             eeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEE
Q psy15995        448 INGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSI  527 (683)
Q Consensus       448 v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (683)
                                                                                               ...++.+
T Consensus       572 -------------------------------------------------------------------------sLTVT~l  578 (764)
T KOG1063|consen  572 -------------------------------------------------------------------------SLTVTRL  578 (764)
T ss_pred             -------------------------------------------------------------------------ceEEEEE
Confidence                                                                                     3346788


Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCccCcce---eecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCC--cccccc
Q psy15995        528 SLDHEHGLVAVGGADSKVHIYELNNKSLSPKA---ELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDF--ELAHNK  602 (683)
Q Consensus       528 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~--~~~~~~  602 (683)
                      +||||+++|++.+.|.++.+|...........   ...|..-|.++.|+|+++++|+++.|.+|++|..+..  +.+...
T Consensus       579 ~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~  658 (764)
T KOG1063|consen  579 AFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRF  658 (764)
T ss_pred             EECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhh
Confidence            99999999999999999999988554322111   2358888999999999999999999999999999987  544442


Q ss_pred             ceeeecccEEEEEecCC-----CCeEEEeecCCcEEEEeCCCCcee----------eEeecCCCCCCeeEEEEccC----
Q psy15995        603 EWGFHSAKVNCVAWSPD-----SALVASGSLDTTIIIWSLASPAKH----------IIIKNAHPQSQITRLQWLDN----  663 (683)
Q Consensus       603 ~~~~h~~~v~~~~~s~d-----~~~l~~~~~d~~v~iw~~~~~~~~----------~~~~~~~~~~~v~~l~~~~~----  663 (683)
                      ....+..+|+++++.|-     +..++.|-+.|.|.+|........          .......|.+.|+.++|.+-    
T Consensus       659 a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~aV~rl~w~p~~~~~  738 (764)
T KOG1063|consen  659 ACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPDSAVNRLLWRPTCSDD  738 (764)
T ss_pred             chhccCCceeeEEeeccccccccceEEEEecccEEEEEecccccccccceeeeeccccccccChHHhhheeEeccccccc
Confidence            22338899999999872     337888999999999996622111          11123346789999999822    


Q ss_pred             -----C--eEEEeeCCCcEEEEeec
Q psy15995        664 -----D--LLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       664 -----~--~l~s~~~d~~v~vw~~~  681 (683)
                           +  .|++++.|.++++++++
T Consensus       739 ~~~~~~~l~la~~g~D~~vri~nv~  763 (764)
T KOG1063|consen  739 WVEDKEWLNLAVGGDDESVRIFNVD  763 (764)
T ss_pred             cccccceeEEeeecccceeEEeecc
Confidence                 1  57999999999999986

>KOG0315|consensus

Probab=100.00  E-value=1.2e-40  Score=268.52  Aligned_cols=272  Identities=18%  Similarity=0.369  Sum_probs=236.2

Q ss_pred             EEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceE
Q psy15995        286 HFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQV  365 (683)
Q Consensus       286 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  365 (683)
                      +|++++.|.+|++|...+|.+..+++.  ..+.|..+...|+++.|++++. ..|++||++++.+               
T Consensus        12 iLvsA~YDhTIRfWqa~tG~C~rTiqh--~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np---------------   73 (311)
T KOG0315|consen   12 ILVSAGYDHTIRFWQALTGICSRTIQH--PDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNP---------------   73 (311)
T ss_pred             EEEeccCcceeeeeehhcCeEEEEEec--CccceeeEEEcCCcchhhhccC-CeeEEEEccCCCC---------------
Confidence            789999999999999999999999985  7789999999999999999875 4799999998753               


Q ss_pred             EEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCC
Q psy15995        366 SCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHG  445 (683)
Q Consensus       366 ~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~  445 (683)
                                                 .|+..+.+|...|+++.|..+|+++++|++||+++|||++.....+.+.    
T Consensus        74 ---------------------------~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~----  122 (311)
T KOG0315|consen   74 ---------------------------NPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ----  122 (311)
T ss_pred             ---------------------------CceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc----
Confidence                                       3567788999999999999999999999999999999999855444432    


Q ss_pred             cceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCc
Q psy15995        446 NQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPS  525 (683)
Q Consensus       446 ~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  525 (683)
                                                                                                +..+++
T Consensus       123 --------------------------------------------------------------------------~~spVn  128 (311)
T KOG0315|consen  123 --------------------------------------------------------------------------HNSPVN  128 (311)
T ss_pred             --------------------------------------------------------------------------CCCCcc
Confidence                                                                                      234678


Q ss_pred             EEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCc----cccc
Q psy15995        526 SISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFE----LAHN  601 (683)
Q Consensus       526 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~----~~~~  601 (683)
                      ++..+|+...|++|..+|.|++||+.+.....+...+....|.++...|||.+|+++...|+.++|++.+..    +...
T Consensus       129 ~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~  208 (311)
T KOG0315|consen  129 TVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPV  208 (311)
T ss_pred             eEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEh
Confidence            899999999999999999999999998876656655677889999999999999999999999999997643    3334


Q ss_pred             cceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCC-ceeeEeecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEe
Q psy15995        602 KEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASP-AKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWE  679 (683)
Q Consensus       602 ~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~-~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~  679 (683)
                      ..+..|.+.+..+.+|||+++||+++.|.+++||+.++- +....+.  .|..-+...+|+ |+++|+|++.|+.+++|+
T Consensus       209 ~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~--gh~rWvWdc~FS~dg~YlvTassd~~~rlW~  286 (311)
T KOG0315|consen  209 HKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLT--GHQRWVWDCAFSADGEYLVTASSDHTARLWD  286 (311)
T ss_pred             hheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEee--cCCceEEeeeeccCccEEEecCCCCceeecc
Confidence            456679999999999999999999999999999999987 3333444  378999999999 999999999999999999


Q ss_pred             ecc
Q psy15995        680 IAP  682 (683)
Q Consensus       680 ~~~  682 (683)
                      ++.
T Consensus       287 ~~~  289 (311)
T KOG0315|consen  287 LSA  289 (311)
T ss_pred             ccc
Confidence            863

>KOG0279|consensus

Probab=100.00  E-value=3.6e-40  Score=270.61  Aligned_cols=301  Identities=22%  Similarity=0.314  Sum_probs=249.2

Q ss_pred             CcccccccCcccceEEEEECCC-CcEEEEecCCCCEEEEeCCCc-----ccccccccccCCCCcccceeeeeecceeeeE
Q psy15995         75 PAISDIYTEHSCAVNVAKYSPS-GFYIASGDISGKVRIWDTVNK-----EHILKNEFHPIGGPIKDIGTLLSLTSIRNIL  148 (683)
Q Consensus        75 ~~~~~~~~~h~~~v~~~~~s~d-~~~las~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  148 (683)
                      ..+..++++|++.|+.++..+. ...|.+++.|.++.+|++...     ..++.+++|.              ..|..++
T Consensus         5 l~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHs--------------H~v~dv~   70 (315)
T KOG0279|consen    5 LVLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHS--------------HFVSDVV   70 (315)
T ss_pred             heeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccc--------------eEecceE
Confidence            3455679999999999999996 468889999999999998754     3455555555              7799999


Q ss_pred             eeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeec-
Q psy15995        149 VLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISG-  227 (683)
Q Consensus       149 ~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-  227 (683)
                      .++||++.++++.|+++++||+.+++.  ...+.+|...|.+++|+||.+.+++++.++.  +.+|+...+........ 
T Consensus        71 ~s~dg~~alS~swD~~lrlWDl~~g~~--t~~f~GH~~dVlsva~s~dn~qivSGSrDkT--iklwnt~g~ck~t~~~~~  146 (315)
T KOG0279|consen   71 LSSDGNFALSASWDGTLRLWDLATGES--TRRFVGHTKDVLSVAFSTDNRQIVSGSRDKT--IKLWNTLGVCKYTIHEDS  146 (315)
T ss_pred             EccCCceEEeccccceEEEEEecCCcE--EEEEEecCCceEEEEecCCCceeecCCCcce--eeeeeecccEEEEEecCC
Confidence            999999999999999999999999864  4667788899999999999999998887743  55665544433333333 


Q ss_pred             CCcCeEEEEeecCC-CeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee
Q psy15995        228 QSKPINSCDFKPSR-PFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL  306 (683)
Q Consensus       228 ~~~~v~~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~  306 (683)
                      +.+.|.|+.|+|+. +..+++++.|+++++||+++.+....+.+|++.++.+++||||...++|+.||.+.+||++.++.
T Consensus       147 ~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~  226 (315)
T KOG0279|consen  147 HREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKN  226 (315)
T ss_pred             CcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCce
Confidence            27899999999994 33599999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEE
Q psy15995        307 VSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYL  386 (683)
Q Consensus       307 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~  386 (683)
                      +..+.   +...|.+++|+|+.-.|+.+.. ..|+|||++++..+.++.......                         
T Consensus       227 lysl~---a~~~v~sl~fspnrywL~~at~-~sIkIwdl~~~~~v~~l~~d~~g~-------------------------  277 (315)
T KOG0279|consen  227 LYSLE---AFDIVNSLCFSPNRYWLCAATA-TSIKIWDLESKAVVEELKLDGIGP-------------------------  277 (315)
T ss_pred             eEecc---CCCeEeeEEecCCceeEeeccC-CceEEEeccchhhhhhcccccccc-------------------------
Confidence            88886   8899999999998766666654 569999999998877664332110                         


Q ss_pred             ecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        387 DVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                                ..+...-...+++|++||..|+.|..|+.|++|.+.
T Consensus       278 ----------s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  278 ----------SSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             ----------ccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence                      112223346778999999999999999999999864

>KOG0273|consensus

Probab=100.00  E-value=4.9e-40  Score=289.55  Aligned_cols=330  Identities=25%  Similarity=0.412  Sum_probs=285.1

Q ss_pred             CcccceEEEEECCCCc-EEEEecCCCCEEEEeCCCc------ccccccccccCCCCcccceeeeeecceeeeEeeccceE
Q psy15995         83 EHSCAVNVAKYSPSGF-YIASGDISGKVRIWDTVNK------EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY  155 (683)
Q Consensus        83 ~h~~~v~~~~~s~d~~-~las~~~dg~i~iwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  155 (683)
                      .|+.+|.+.+|+|-.. .||+++.|-..++|++...      ....+-....      ..+.......|++++|+.+|..
T Consensus       176 ~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~------~~~s~~~nkdVT~L~Wn~~G~~  249 (524)
T KOG0273|consen  176 RHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIRE------GGKSVPSNKDVTSLDWNNDGTL  249 (524)
T ss_pred             cCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhh------hcccCCccCCcceEEecCCCCe
Confidence            4999999999999665 8999999999999999751      1111111110      1123344478999999999999


Q ss_pred             EEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEE
Q psy15995        156 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSC  235 (683)
Q Consensus       156 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  235 (683)
                      ||+|+.||.+++|+....   +...+..|.++|.++.|+.+|+++++++.++.  ..+|+..+|.....+.-|..+-..+
T Consensus       250 LatG~~~G~~riw~~~G~---l~~tl~~HkgPI~slKWnk~G~yilS~~vD~t--tilwd~~~g~~~q~f~~~s~~~lDV  324 (524)
T KOG0273|consen  250 LATGSEDGEARIWNKDGN---LISTLGQHKGPIFSLKWNKKGTYILSGGVDGT--TILWDAHTGTVKQQFEFHSAPALDV  324 (524)
T ss_pred             EEEeecCcEEEEEecCch---hhhhhhccCCceEEEEEcCCCCEEEeccCCcc--EEEEeccCceEEEeeeeccCCccce
Confidence            999999999999998765   34567788999999999999999999988765  6788888999999999999998889


Q ss_pred             EeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCcc
Q psy15995        236 DFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAH  315 (683)
Q Consensus       236 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~  315 (683)
                      .|-.+..  +++++.|+.|+++.+....+..++.+|.++|.++.|+|.|.+|++++.|+++++|+.........+..  |
T Consensus       325 dW~~~~~--F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~--H  400 (524)
T KOG0273|consen  325 DWQSNDE--FATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQA--H  400 (524)
T ss_pred             EEecCce--EeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhh--h
Confidence            9988875  99999999999999999999999999999999999999999999999999999999988888888876  9


Q ss_pred             ccCeEEEEEccCC---------CEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEE
Q psy15995        316 KGGVYAVAWKPDG---------TQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYL  386 (683)
Q Consensus       316 ~~~i~~~~~~~~~---------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~  386 (683)
                      ...|..+.|+|.+         ..+++++.|++|++||+..+.++..                                 
T Consensus       401 skei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~---------------------------------  447 (524)
T KOG0273|consen  401 SKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHT---------------------------------  447 (524)
T ss_pred             ccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEe---------------------------------
Confidence            9999999999964         3688888888888888888776544                                 


Q ss_pred             ecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe--CCeEEEEEcC
Q psy15995        387 DVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCGID  464 (683)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d  464 (683)
                                 +..|..+|.+++|+|+|+++++|+.||.|.+|+.++++..+...  ....|..++|+  |+++..+..|
T Consensus       448 -----------f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~--~~~~Ifel~Wn~~G~kl~~~~sd  514 (524)
T KOG0273|consen  448 -----------LMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQ--GTGGIFELCWNAAGDKLGACASD  514 (524)
T ss_pred             -----------eccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeec--CCCeEEEEEEcCCCCEEEEEecC
Confidence                       46799999999999999999999999999999999999888764  55668999998  9999999999


Q ss_pred             CeEEEEeCC
Q psy15995        465 DTIKQVDLS  473 (683)
Q Consensus       465 ~~i~~~~~~  473 (683)
                      +.+.+.|++
T Consensus       515 ~~vcvldlr  523 (524)
T KOG0273|consen  515 GSVCVLDLR  523 (524)
T ss_pred             CCceEEEec
Confidence            999999875

>KOG0296|consensus

Probab=100.00  E-value=2.5e-39  Score=275.87  Aligned_cols=339  Identities=19%  Similarity=0.317  Sum_probs=273.6

Q ss_pred             CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEE
Q psy15995        220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLY  299 (683)
Q Consensus       220 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  299 (683)
                      ..+..+..|...|.+++.+|+.+ ++++|+.|..-.+|+..++.....+.+|...|+++.|+.+|.+||+|+.+|.|++|
T Consensus        55 dS~~tF~~H~~svFavsl~P~~~-l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~  133 (399)
T KOG0296|consen   55 DSLVTFDKHTDSVFAVSLHPNNN-LVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVF  133 (399)
T ss_pred             cceeehhhcCCceEEEEeCCCCc-eEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEE
Confidence            45667889999999999999777 59999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEec
Q psy15995        300 DGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSL  379 (683)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  379 (683)
                      +..++.....+..  .-..+.-+.|+|.+..|++|+.||.+.+|.+.++...                            
T Consensus       134 ~~stg~~~~~~~~--e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~----------------------------  183 (399)
T KOG0296|consen  134 KVSTGGEQWKLDQ--EVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALC----------------------------  183 (399)
T ss_pred             EcccCceEEEeec--ccCceEEEEecccccEEEeecCCCcEEEEECCCccee----------------------------
Confidence            9999998888864  6678999999999999999999999999999875332                            


Q ss_pred             CCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe--CCe
Q psy15995        380 SGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--GEL  457 (683)
Q Consensus       380 ~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~  457 (683)
                                      +.+.+|..++++=.|.|+|+.++++..||+|++||+.++.+.............++.++  +..
T Consensus       184 ----------------kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~  247 (399)
T KOG0296|consen  184 ----------------KVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGST  247 (399)
T ss_pred             ----------------eEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccce
Confidence                            45678999999999999999999999999999999999987766643333333333333  334


Q ss_pred             EEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEE
Q psy15995        458 LYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVA  537 (683)
Q Consensus       458 l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  537 (683)
                      ++.|..++.+.+.+..+                                                               
T Consensus       248 ~~~g~~e~~~~~~~~~s---------------------------------------------------------------  264 (399)
T KOG0296|consen  248 LTKGNSEGVACGVNNGS---------------------------------------------------------------  264 (399)
T ss_pred             eEeccCCccEEEEcccc---------------------------------------------------------------
Confidence            44444443333322221                                                               


Q ss_pred             EEcCCCcEEEEEcCCCccCcceeecCCcC---eeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEE
Q psy15995        538 VGGADSKVHIYELNNKSLSPKAELDHLGP---VTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCV  614 (683)
Q Consensus       538 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~  614 (683)
                           |+|......+.   +.....+...   |.++.++..-.+.|+|+-||+|.|||+...++.+...   |...|+.+
T Consensus       265 -----gKVv~~~n~~~---~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~---he~~V~~l  333 (399)
T KOG0296|consen  265 -----GKVVNCNNGTV---PELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICE---HEDGVTKL  333 (399)
T ss_pred             -----ceEEEecCCCC---ccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheecc---CCCceEEE
Confidence                 11111111111   1112223333   4445555567788999999999999999988876655   89999999


Q ss_pred             EecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEeecc
Q psy15995        615 AWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       615 ~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~~~  682 (683)
                      .|-+ ..+|++++.||.|+.||.++++.+..+.+  |...|.+++.+ +.++++|+|.|+..+|++++.
T Consensus       334 ~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~G--H~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~~  399 (399)
T KOG0296|consen  334 KWLN-TDYLLTACANGKVRQWDARTGQLKFTYTG--HQMGILDFALSPQKRLVVTVSDDNTALVFEVPN  399 (399)
T ss_pred             EEcC-cchheeeccCceEEeeeccccceEEEEec--CchheeEEEEcCCCcEEEEecCCCeEEEEecCC
Confidence            9998 78999999999999999999999999977  89999999999 778999999999999998763

>KOG0276|consensus

Probab=100.00  E-value=2.2e-37  Score=282.44  Aligned_cols=462  Identities=18%  Similarity=0.209  Sum_probs=345.6

Q ss_pred             cCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccc
Q psy15995         43 QRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHIL  121 (683)
Q Consensus        43 ~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~  121 (683)
                      ...++-++.++|-..++.++ -+|.|.|||.++..+++.+.-..-+|.+..|-+-.+++++|++|..|+|++.++++.+.
T Consensus        12 rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~   91 (794)
T KOG0276|consen   12 RSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVK   91 (794)
T ss_pred             cCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeE
Confidence            34578899999999998888 68999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCC-CCeE
Q psy15995        122 KNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPD-NQRM  200 (683)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l  200 (683)
                      .++.|+              .-|++++..|...++++++.|-+|++||.+.+ -.+...+.+|..-|.+++|+|. .+.+
T Consensus        92 ~FeAH~--------------DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~-wa~~qtfeGH~HyVMqv~fnPkD~ntF  156 (794)
T KOG0276|consen   92 TFEAHS--------------DYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE-WACEQTFEGHEHYVMQVAFNPKDPNTF  156 (794)
T ss_pred             Eeeccc--------------cceeeeeecCCCCeEEecCCccEEEEeeccCc-eeeeeEEcCcceEEEEEEecCCCccce
Confidence            999998              88999999999999999999999999999875 4466778899999999999995 5677


Q ss_pred             EEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCC--CeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEE
Q psy15995        201 VVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSR--PFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAV  278 (683)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~  278 (683)
                      ++++-++.  +.+|......+..++.+|...|+++.|-+.+  + +|++|+.|.+++|||.++..+++++.+|...|..+
T Consensus       157 aS~sLDrT--VKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkp-ylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v  233 (794)
T KOG0276|consen  157 ASASLDRT--VKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKP-YLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFV  233 (794)
T ss_pred             eeeecccc--EEEEEcCCCCCceeeeccccCcceEEeccCCCcc-eEEecCCCceEEEeecchHHHHHHhhcccccceEE
Confidence            77776654  7899999999999999999999999998855  5 49999999999999999999999999999999999


Q ss_pred             EECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecC
Q psy15995        279 RYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGN  358 (683)
Q Consensus       279 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  358 (683)
                      .|+|.-..+++|+.||++++|+..+-+....+..  ..+.+.|++-.+.+..++.|..+|.+. ..+....+...+    
T Consensus       234 ~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~--gleRvW~I~~~k~~~~i~vG~Deg~i~-v~lgreeP~vsM----  306 (794)
T KOG0276|consen  234 FFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNY--GLERVWCIAAHKGDGKIAVGFDEGSVT-VKLGREEPAVSM----  306 (794)
T ss_pred             EecCCCcEEEEecCCccEEEecCcceehhhhhhc--CCceEEEEeecCCCCeEEEeccCCcEE-EEccCCCCceee----
Confidence            9999999999999999999999998888888876  778999999999888888888777654 455544443332    


Q ss_pred             cceeceEEEEecCCEEEEEecCCcEEEEe---------cCCCCcc---eeeeeeccccEEEEEEeCCCCEEEEEeCCCcE
Q psy15995        359 QVEDQQVSCLWQGDYLLTVSLSGFISYLD---------VNNPSTP---IRVIKGHNKPITALALSPDRGTVFTGSHDGFI  426 (683)
Q Consensus       359 ~~~~~~~~~~~~~~~l~~~~~~g~i~~~~---------~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  426 (683)
                               .+.|+.+.+..  +.+.--+         +..+...   ++.+..-.-....++-+|+|+.+++++ ||.-
T Consensus       307 ---------d~~gKIiwa~~--~ei~~~~~ks~~~~~ev~DgErL~LsvKeLgs~eiyPq~L~hsPNGrfV~Vcg-dGEy  374 (794)
T KOG0276|consen  307 ---------DSNGKIIWAVH--SEIQAVNLKSVGAQKEVTDGERLPLSVKELGSVEIYPQTLAHSPNGRFVVVCG-DGEY  374 (794)
T ss_pred             ---------cCCccEEEEcC--ceeeeeeceeccCcccccCCccccchhhhccccccchHHhccCCCCcEEEEec-CccE
Confidence                     22222222211  1111111         1111110   011111111123456677777666653 5666


Q ss_pred             EEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceE
Q psy15995        427 TRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQI  506 (683)
Q Consensus       427 ~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (683)
                      .||..-.-+. +                                                                    
T Consensus       375 iIyTala~Rn-K--------------------------------------------------------------------  385 (794)
T KOG0276|consen  375 IIYTALALRN-K--------------------------------------------------------------------  385 (794)
T ss_pred             EEEEeeehhh-c--------------------------------------------------------------------
Confidence            6654211000 0                                                                    


Q ss_pred             EEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCC
Q psy15995        507 SIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHR  586 (683)
Q Consensus       507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~  586 (683)
                                   .-.....+.|.+|.+..++-.+++.|.++  ++.+.........   .  +..- -|..|+....++
T Consensus       386 -------------~fG~~~eFvw~~dsne~avRes~~~vki~--knfke~ksi~~~~---~--~e~i-~gg~Llg~~ss~  444 (794)
T KOG0276|consen  386 -------------AFGSGLEFVWAADSNEFAVRESNGNVKIF--KNFKEHKSIRPDM---S--AEGI-FGGPLLGVRSSD  444 (794)
T ss_pred             -------------ccccceeEEEcCCCCeEEEEecCCceEEE--ecceecccccccc---c--eeee-cCCceEEEEeCC
Confidence                         00122456777887778887778888888  4444332222110   0  1111 133455555677


Q ss_pred             eEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeC
Q psy15995        587 KVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSL  637 (683)
Q Consensus       587 ~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~  637 (683)
                      .+++||..+++++.....     ....+.|+.+|.+++.++.|. .+++.+
T Consensus       445 ~~~fydW~~~~lVrrI~v-----~~k~v~w~d~g~lVai~~d~S-fyil~~  489 (794)
T KOG0276|consen  445 FLCFYDWESGELVRRIEV-----TSKHVYWSDNGELVAIAGDDS-FYILKF  489 (794)
T ss_pred             eEEEEEcccceEEEEEee-----ccceeEEecCCCEEEEEecCc-eeEEEe
Confidence            899999999998876543     355788999999888888665 455543

>KOG0273|consensus

Probab=100.00  E-value=1.4e-38  Score=280.36  Aligned_cols=322  Identities=22%  Similarity=0.353  Sum_probs=271.5

Q ss_pred             cCCCeEEEeeCCCCC-eEEEec-CCeEEEEeCCC----Cccccccc------C----cccceEEEEECCCCcEEEEecCC
Q psy15995         43 QRGQPIVLGGDPKGK-NFLYTN-GNSVIIRNIEN----PAISDIYT------E----HSCAVNVAKYSPSGFYIASGDIS  106 (683)
Q Consensus        43 ~~~~~~~~~~s~~~~-~l~~~~-~~~i~v~~~~~----~~~~~~~~------~----h~~~v~~~~~s~d~~~las~~~d  106 (683)
                      +...+++.+|+|-.. .++++. +-..++|++..    +..+..|+      +    ....|++++|+.+|.+||+|+.|
T Consensus       177 ~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~  256 (524)
T KOG0273|consen  177 HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSED  256 (524)
T ss_pred             CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecC
Confidence            556788899999877 777774 56789999874    11111222      1    24689999999999999999999


Q ss_pred             CCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCC
Q psy15995        107 GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGG  186 (683)
Q Consensus       107 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~  186 (683)
                      |.++||+. .|.++..+..|.              .+|.++.|+..|.||++++.|+++.+||..+++......+.  ..
T Consensus       257 G~~riw~~-~G~l~~tl~~Hk--------------gPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~--s~  319 (524)
T KOG0273|consen  257 GEARIWNK-DGNLISTLGQHK--------------GPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFH--SA  319 (524)
T ss_pred             cEEEEEec-CchhhhhhhccC--------------CceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeec--cC
Confidence            99999995 555677777776              88999999999999999999999999999998865555444  46


Q ss_pred             CeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceee
Q psy15995        187 PIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM  266 (683)
Q Consensus       187 ~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~  266 (683)
                      +-..+.|-.+..+.....   +..++|+......++.++.+|.++|.++.|+|.+.. |++++.|++++||+........
T Consensus       320 ~~lDVdW~~~~~F~ts~t---d~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~L-LaS~SdD~TlkiWs~~~~~~~~  395 (524)
T KOG0273|consen  320 PALDVDWQSNDEFATSST---DGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSL-LASCSDDGTLKIWSMGQSNSVH  395 (524)
T ss_pred             CccceEEecCceEeecCC---CceEEEEEecCCCcceeeecccCceEEEEECCCCce-EEEecCCCeeEeeecCCCcchh
Confidence            657788887665443333   234788888999999999999999999999999995 9999999999999999999999


Q ss_pred             eccccccCeEEEEECCCC---------CEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECC
Q psy15995        267 TKQEHSRFVQAVRYSPSG---------SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD  337 (683)
Q Consensus       267 ~~~~~~~~v~~~~~~~~~---------~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  337 (683)
                      .++.|+..|..+.|+|.|         ..+++++.|++|++||+..+.++..+..  |..+|++++|+|+++++++|+.|
T Consensus       396 ~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~k--H~~pVysvafS~~g~ylAsGs~d  473 (524)
T KOG0273|consen  396 DLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMK--HQEPVYSVAFSPNGRYLASGSLD  473 (524)
T ss_pred             hhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeecc--CCCceEEEEecCCCcEEEecCCC
Confidence            999999999999999964         4789999999999999999999999976  99999999999999999999999


Q ss_pred             CcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEE
Q psy15995        338 KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTV  417 (683)
Q Consensus       338 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  417 (683)
                      |.|.+|+.++++..+.+.                                             ..+.|..++|+.+|.++
T Consensus       474 g~V~iws~~~~~l~~s~~---------------------------------------------~~~~Ifel~Wn~~G~kl  508 (524)
T KOG0273|consen  474 GCVHIWSTKTGKLVKSYQ---------------------------------------------GTGGIFELCWNAAGDKL  508 (524)
T ss_pred             CeeEeccccchheeEeec---------------------------------------------CCCeEEEEEEcCCCCEE
Confidence            999999999998876642                                             24458888999999888


Q ss_pred             EEEeCCCcEEEEcCC
Q psy15995        418 FTGSHDGFITRWNAK  432 (683)
Q Consensus       418 ~~~~~dg~i~~w~~~  432 (683)
                      ..+..|+.+++.|++
T Consensus       509 ~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  509 GACASDGSVCVLDLR  523 (524)
T ss_pred             EEEecCCCceEEEec
Confidence            888889998888865

>KOG2048|consensus

Probab=100.00  E-value=6e-36  Score=276.19  Aligned_cols=490  Identities=16%  Similarity=0.206  Sum_probs=366.6

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCc
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTS  221 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~  221 (683)
                      ..|.+++++.+.+.||.+-.+|.|.+|++..+-........+...                                   
T Consensus        26 s~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~dr-----------------------------------   70 (691)
T KOG2048|consen   26 SEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDR-----------------------------------   70 (691)
T ss_pred             cceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCC-----------------------------------
Confidence            789999999999999999999999999998753322111111223                                   


Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeC
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDG  301 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  301 (683)
                               .|..++|++.+  +|++.+-+|.|.-||+.+++.+..+....+.|++++.+|.+..++.|+.||.+..++.
T Consensus        71 ---------sIE~L~W~e~~--RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~  139 (691)
T KOG2048|consen   71 ---------SIESLAWAEGG--RLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSI  139 (691)
T ss_pred             ---------ceeeEEEccCC--eEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEec
Confidence                     34555555444  4899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEec-----CcceeceEEEEe-cCCEEE
Q psy15995        302 ASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMG-----NQVEDQQVSCLW-QGDYLL  375 (683)
Q Consensus       302 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~l~  375 (683)
                      ..++..........++.+.+++|+|++..+++|+.||.|++||...+..+......     .......++... ....++
T Consensus       140 ~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~  219 (691)
T KOG2048|consen  140 GPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIA  219 (691)
T ss_pred             CCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEE
Confidence            88888777666557799999999999999999999999999999999877633222     112222222222 778999


Q ss_pred             EEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCc---ceeccCCCCcceeEEE
Q psy15995        376 TVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEN---DRVQGAGHGNQINGMK  452 (683)
Q Consensus       376 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~---~~~~~~~~~~~v~~~~  452 (683)
                      +|...|.|.+||... ...++....|...|.+++..+++.++++++.|+.|..+...+...   .......|...+.+++
T Consensus       220 sgDS~G~V~FWd~~~-gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~a  298 (691)
T KOG2048|consen  220 SGDSAGTVTFWDSIF-GTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMA  298 (691)
T ss_pred             EecCCceEEEEcccC-cchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeee
Confidence            999999999999988 666777888999999999999999999999999999998887754   3334467999999999


Q ss_pred             EeCCeEEEEEcCCeEEEEeCCCCcccCCce--ecCCCCceeeecCCeEEEEE-eceEEEEeCCcee------------ee
Q psy15995        453 ATGELLYTCGIDDTIKQVDLSSNAYSGPEV--KLGSQPRGLDIDENTLVTVT-VKQISIVENGAKV------------SS  517 (683)
Q Consensus       453 ~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------------~~  517 (683)
                      ..+..+++|+.|..+.+-.....+......  ...............+.... ......+..+...            ..
T Consensus       299 v~~~~l~sgG~d~~l~i~~s~~~~~~~h~~~~~~p~~~~v~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~  378 (691)
T KOG2048|consen  299 VIENALISGGRDFTLAICSSREFKNMDHRQKNLFPASDRVSVAPENRLLVLWKAHGVDLWRLGSVILQGEYNYIHLLKLF  378 (691)
T ss_pred             eecceEEecceeeEEEEccccccCchhhhccccccccceeecCccceEEEEeccccccceeccCcccccccChhhheeee
Confidence            999999999999999988776643322221  11111111112222222222 3333333333221            12


Q ss_pred             ecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeec----CCcCeeEEEECCCCCEEEEEe-CCCeEEEEE
Q psy15995        518 LPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELD----HLGPVTDCSFSPSNEYLVASD-AHRKVVLYR  592 (683)
Q Consensus       518 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~  592 (683)
                      .+....+.+.+++|+|++++.+.- ..+++|.+.....+......    ..-....+.|+-|+..++.++ ....+.+++
T Consensus       379 ~k~~~nIs~~aiSPdg~~Ia~st~-~~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~e  457 (691)
T KOG2048|consen  379 TKEKENISCAAISPDGNLIAISTV-SRTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFE  457 (691)
T ss_pred             cCCccceeeeccCCCCCEEEEeec-cceEEEEeccCcceeEEEeccchhhhccceeeEEEecCceEEEEecccceeEEEE
Confidence            234567899999999999999865 35788877654332222221    233567888998888887777 778888888


Q ss_pred             CCCCccccc--cceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc--cCCeEEE
Q psy15995        593 VPDFELAHN--KEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL--DNDLLVS  668 (683)
Q Consensus       593 ~~~~~~~~~--~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~~l~s  668 (683)
                      +.+......  ....+-...|+.+..||||++||+.+.+|.|.+|++++.+.......  ....|+.++|.  +.+.|+.
T Consensus       458 l~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~g~I~v~nl~~~~~~~l~~r--ln~~vTa~~~~~~~~~~lvv  535 (691)
T KOG2048|consen  458 LETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAISTRGQIFVYNLETLESHLLKVR--LNIDVTAAAFSPFVRNRLVV  535 (691)
T ss_pred             ecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEeccceEEEEEcccceeecchhc--cCcceeeeeccccccCcEEE
Confidence            876443222  11112456799999999999999999999999999999887665522  24789999999  4568999


Q ss_pred             eeCCCcEEEEeec
Q psy15995        669 VGQDCNTKIWEIA  681 (683)
Q Consensus       669 ~~~d~~v~vw~~~  681 (683)
                      +..|+++.-++++
T Consensus       536 ats~nQv~efdi~  548 (691)
T KOG2048|consen  536 ATSNNQVFEFDIE  548 (691)
T ss_pred             EecCCeEEEEecc
Confidence            9999999999884

>KOG2048|consensus

Probab=100.00  E-value=1.2e-35  Score=274.23  Aligned_cols=539  Identities=13%  Similarity=0.134  Sum_probs=393.9

Q ss_pred             CCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcc-cccccCc-ccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccc
Q psy15995         44 RGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAI-SDIYTEH-SCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHI  120 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~-~~~~~~h-~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~  120 (683)
                      +..+++||||.+.+.||.+ .+|.|.+|++..+-. ..++.|+ ...|.+++|++. .+|.+.+.+|.|.-||+.+++++
T Consensus        25 Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~-~RLFS~g~sg~i~EwDl~~lk~~  103 (691)
T KOG2048|consen   25 PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEG-GRLFSSGLSGSITEWDLHTLKQK  103 (691)
T ss_pred             ccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccC-CeEEeecCCceEEEEecccCcee
Confidence            4578999999999999988 789999999987643 4456665 578999999954 57889899999999999999988


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeE
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRM  200 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  200 (683)
                      ..++...              ..|.+++.+|.+..++.|++||.+...+...++......+....+++.+++|+|++..+
T Consensus       104 ~~~d~~g--------------g~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i  169 (691)
T KOG2048|consen  104 YNIDSNG--------------GAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKI  169 (691)
T ss_pred             EEecCCC--------------cceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEE
Confidence            8877665              78999999999999999999998888899888877777777777999999999999999


Q ss_pred             EEEecCCceEEEEEEccCCCceeee-------ec-CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccc
Q psy15995        201 VVVGEGRERFGHVFMSETGTSVGEI-------SG-QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS  272 (683)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~  272 (683)
                      +.++.+.  .+.+|+..++..+...       .. ..--|+++.|-.++  .+++|...|+|.+||...+.+++....|.
T Consensus       170 ~~Gs~Dg--~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~--tI~sgDS~G~V~FWd~~~gTLiqS~~~h~  245 (691)
T KOG2048|consen  170 AGGSIDG--VIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS--TIASGDSAGTVTFWDSIFGTLIQSHSCHD  245 (691)
T ss_pred             EecccCc--eEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC--cEEEecCCceEEEEcccCcchhhhhhhhh
Confidence            9988775  3789999888776622       12 34458899998777  49999999999999999999999999999


Q ss_pred             cCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCe--eEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCce
Q psy15995        273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASAD--LVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSV  350 (683)
Q Consensus       273 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  350 (683)
                      ..|.+++..++++.+++++.|+.|..+...+..  .+.......|...+.+++..++  .+++|+.|..+.+-..+..+.
T Consensus       246 adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s~~~~~  323 (691)
T KOG2048|consen  246 ADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSSREFKN  323 (691)
T ss_pred             cceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEccccccCc
Confidence            999999999999999999999999999876653  3333333458899999999976  899999999888876554222


Q ss_pred             eeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCC--------cceeeeeeccccEEEEEEeCCCCEEEEEeC
Q psy15995        351 VSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS--------TPIRVIKGHNKPITALALSPDRGTVFTGSH  422 (683)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  422 (683)
                      .... ................++++.--....+.+|.+....        ...+........|.+.+.+|+|++++.+.-
T Consensus       324 ~~h~-~~~~~p~~~~v~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st~  402 (691)
T KOG2048|consen  324 MDHR-QKNLFPASDRVSVAPENRLLVLWKAHGVDLWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNLIAISTV  402 (691)
T ss_pred             hhhh-ccccccccceeecCccceEEEEeccccccceeccCcccccccChhhheeeecCCccceeeeccCCCCCEEEEeec
Confidence            1111 1111222222223344555555666667777765431        122222334567999999999999998753


Q ss_pred             CCcEEEEcCCCCCcceeccC----CCCcceeEEEEe--CCeEEEEE-cCCeEEEEeCCCCcccCCceecCCCCceeeecC
Q psy15995        423 DGFITRWNAKTGENDRVQGA----GHGNQINGMKAT--GELLYTCG-IDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDE  495 (683)
Q Consensus       423 dg~i~~w~~~~~~~~~~~~~----~~~~~v~~~~~~--~~~l~~~~-~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (683)
                       ..+++|.++....+.....    ...-....+.+.  ++.++.++ ....+..+++.+.......              
T Consensus       403 -~~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~--------------  467 (691)
T KOG2048|consen  403 -SRTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELK--------------  467 (691)
T ss_pred             -cceEEEEeccCcceeEEEeccchhhhccceeeEEEecCceEEEEecccceeEEEEecCcchhhhh--------------
Confidence             4578888776443222211    112233444444  66776666 5666777776654332111              


Q ss_pred             CeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECC-
Q psy15995        496 NTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSP-  574 (683)
Q Consensus       496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~-  574 (683)
                                        ..........++.++.+|+|+++|+.+..|.|.+|++++.+...... .....+++++|+| 
T Consensus       468 ------------------~~~~~~~~~~I~~l~~SsdG~yiaa~~t~g~I~v~nl~~~~~~~l~~-rln~~vTa~~~~~~  528 (691)
T KOG2048|consen  468 ------------------SIQSQAKCPSISRLVVSSDGNYIAAISTRGQIFVYNLETLESHLLKV-RLNIDVTAAAFSPF  528 (691)
T ss_pred             ------------------ccccccCCCcceeEEEcCCCCEEEEEeccceEEEEEcccceeecchh-ccCcceeeeecccc
Confidence                              11111234578999999999999999999999999999987664442 2347899999995 


Q ss_pred             CCCEEEEEeCCCeEEEEECCCCccc---------cccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCC
Q psy15995        575 SNEYLVASDAHRKVVLYRVPDFELA---------HNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       575 ~~~~l~~~~~d~~i~i~~~~~~~~~---------~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~  638 (683)
                      +...|+.+..++++.-||++..++.         ....+..-...+..+.|+|..+..+..-..+-+++.|..
T Consensus       529 ~~~~lvvats~nQv~efdi~~~~l~~ws~~nt~nlpk~~~~l~~~~~gisfd~~n~s~~~~~~a~w~~~id~~  601 (691)
T KOG2048|consen  529 VRNRLVVATSNNQVFEFDIEARNLTRWSKNNTRNLPKEPKTLIPGIPGISFDPKNSSRFIVYDAHWSCLIDFS  601 (691)
T ss_pred             ccCcEEEEecCCeEEEEecchhhhhhhhhccccccccChhhcCCCCceEEeCCCCccEEEEEcCcEEEEEecC
Confidence            7788999999999999999532211         001111134568888888766655555555566676653

>KOG0296|consensus

Probab=100.00  E-value=5e-38  Score=267.93  Aligned_cols=341  Identities=20%  Similarity=0.309  Sum_probs=285.3

Q ss_pred             ccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEc
Q psy15995        179 NEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFE  258 (683)
Q Consensus       179 ~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~  258 (683)
                      ..+..|...+.+++.+|+.+++++++++..  .++|...++....++.+|.+.|+++.|+.++.+ |++|..+|.|+||+
T Consensus        58 ~tF~~H~~svFavsl~P~~~l~aTGGgDD~--AflW~~~~ge~~~eltgHKDSVt~~~Fshdgtl-LATGdmsG~v~v~~  134 (399)
T KOG0296|consen   58 VTFDKHTDSVFAVSLHPNNNLVATGGGDDL--AFLWDISTGEFAGELTGHKDSVTCCSFSHDGTL-LATGDMSGKVLVFK  134 (399)
T ss_pred             eehhhcCCceEEEEeCCCCceEEecCCCce--EEEEEccCCcceeEecCCCCceEEEEEccCceE-EEecCCCccEEEEE
Confidence            456778899999999997777777766654  689999999999999999999999999999996 99999999999999


Q ss_pred             CCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC
Q psy15995        259 GPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK  338 (683)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  338 (683)
                      ..++.....+...-..+.-+.|+|.+..|++|+.||.+.+|.+.++...+.+..  |..++++=.|.|+|++++++..||
T Consensus       135 ~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~G--h~~~ct~G~f~pdGKr~~tgy~dg  212 (399)
T KOG0296|consen  135 VSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSG--HNSPCTCGEFIPDGKRILTGYDDG  212 (399)
T ss_pred             cccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecC--CCCCcccccccCCCceEEEEecCc
Confidence            999999888877778899999999999999999999999999999877788866  999999999999999999999999


Q ss_pred             cEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEE
Q psy15995        339 TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVF  418 (683)
Q Consensus       339 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  418 (683)
                      +|++||+.+++++..+...                                           ...+..++.++..+..++
T Consensus       213 ti~~Wn~ktg~p~~~~~~~-------------------------------------------e~~~~~~~~~~~~~~~~~  249 (399)
T KOG0296|consen  213 TIIVWNPKTGQPLHKITQA-------------------------------------------EGLELPCISLNLAGSTLT  249 (399)
T ss_pred             eEEEEecCCCceeEEeccc-------------------------------------------ccCcCCccccccccceeE
Confidence            9999999999887655211                                           134566788888889999


Q ss_pred             EEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeE
Q psy15995        419 TGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTL  498 (683)
Q Consensus       419 ~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (683)
                      .|..++.+++-+..+++.+.....  ..+.  +.                                              
T Consensus       250 ~g~~e~~~~~~~~~sgKVv~~~n~--~~~~--l~----------------------------------------------  279 (399)
T KOG0296|consen  250 KGNSEGVACGVNNGSGKVVNCNNG--TVPE--LK----------------------------------------------  279 (399)
T ss_pred             eccCCccEEEEccccceEEEecCC--CCcc--cc----------------------------------------------
Confidence            999999999988877776554421  0000  00                                              


Q ss_pred             EEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCE
Q psy15995        499 VTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEY  578 (683)
Q Consensus       499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  578 (683)
                                      ...-.....+..+.++..-.+.|+|+-||+|.|||+....+.  ....|..+|+.+.|-+ ..+
T Consensus       280 ----------------~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R--~~c~he~~V~~l~w~~-t~~  340 (399)
T KOG0296|consen  280 ----------------PSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLR--HICEHEDGVTKLKWLN-TDY  340 (399)
T ss_pred             ----------------ccchhhhhhhhhcccccccchhhcccccceEEEEecccchhh--eeccCCCceEEEEEcC-cch
Confidence                            000001112344555666778999999999999999887765  3445889999999998 789


Q ss_pred             EEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCC
Q psy15995        579 LVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       579 l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~  638 (683)
                      |++++.+|.|+.||..+|++.  ..+.+|...|.+++++|+.++++|++.|++.+||+++
T Consensus       341 l~t~c~~g~v~~wDaRtG~l~--~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  341 LLTACANGKVRQWDARTGQLK--FTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP  398 (399)
T ss_pred             heeeccCceEEeeeccccceE--EEEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence            999999999999999999987  4566699999999999999999999999999999875

>KOG0295|consensus

Probab=100.00  E-value=9.5e-39  Score=272.14  Aligned_cols=283  Identities=17%  Similarity=0.259  Sum_probs=258.0

Q ss_pred             cCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCC-cccc
Q psy15995         43 QRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVN-KEHI  120 (683)
Q Consensus        43 ~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~-~~~~  120 (683)
                      ++..++.+-|+|+--.++.+ .+.+|++||..++++.+.|+||++.|..++|+..|++||+++.|-.+++||.++ .+++
T Consensus       107 ~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~  186 (406)
T KOG0295|consen  107 HRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCI  186 (406)
T ss_pred             cccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHH
Confidence            45567778899999998888 688999999999999999999999999999999999999999999999999987 5566


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeE
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRM  200 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  200 (683)
                      ..+..|.              ..|.++.|-|.|.++++++.|.+|+.|++.++.++  ..+.+|...|..++.+.||..+
T Consensus       187 ks~~gh~--------------h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv--~t~~~h~ewvr~v~v~~DGti~  250 (406)
T KOG0295|consen  187 KSLIGHE--------------HGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCV--KTFPGHSEWVRMVRVNQDGTII  250 (406)
T ss_pred             HHhcCcc--------------cceeeEEEEecCCeeeecccccceeEEecccceeE--EeccCchHhEEEEEecCCeeEE
Confidence            6666665              67999999999999999999999999999999865  5677888999999999999999


Q ss_pred             EEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCC--------------eEEEEeeCCCeEEEEcCCCCceee
Q psy15995        201 VVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRP--------------FRIITGSEDNTIAVFEGPPFKFKM  266 (683)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------------~~l~~~~~d~~i~iw~~~~~~~~~  266 (683)
                      ++++.+..  +++|...++.+...+++|..+|.+++|.|...              ..+.+++.|++|++||++++.++.
T Consensus       251 As~s~dqt--l~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~  328 (406)
T KOG0295|consen  251 ASCSNDQT--LRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLF  328 (406)
T ss_pred             EecCCCce--EEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEE
Confidence            88877654  78999999999999999999999999976521              259999999999999999999999


Q ss_pred             eccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEEC
Q psy15995        267 TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI  345 (683)
Q Consensus       267 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  345 (683)
                      ++.+|.+.|..++|+|.|++|+++..|+++++||++++++...+..  |..-++++.|+.+..++++|+-|..+++|.-
T Consensus       329 tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~a--h~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  329 TLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEA--HEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             EEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCC--CcceeEEEecCCCCceEEeccccceeeeeec
Confidence            9999999999999999999999999999999999999999999975  9999999999999999999999999999964

>KOG2106|consensus

Probab=100.00  E-value=1e-35  Score=264.61  Aligned_cols=490  Identities=16%  Similarity=0.165  Sum_probs=376.8

Q ss_pred             ccCCCeEEEeeCCCCCeEEEecC---------CeEEEEeCCCCcccccccCcccceEEEEECC--CCcEEEEec--CCCC
Q psy15995         42 TQRGQPIVLGGDPKGKNFLYTNG---------NSVIIRNIENPAISDIYTEHSCAVNVAKYSP--SGFYIASGD--ISGK  108 (683)
Q Consensus        42 ~~~~~~~~~~~s~~~~~l~~~~~---------~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~--d~~~las~~--~dg~  108 (683)
                      .+...+.|++++||.-.++.+..         ..+++||..+.+.++.+..-...|+|++||+  .|.+|+..+  .+..
T Consensus       102 GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~h~  181 (626)
T KOG2106|consen  102 GHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDDSNPHM  181 (626)
T ss_pred             CCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceeeeeeccccccceeeeecccCCCceEEEecCCCccc
Confidence            35567899999999999997732         2699999988888888888889999999998  456676654  4456


Q ss_pred             EEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCe
Q psy15995        109 VRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPI  188 (683)
Q Consensus       109 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i  188 (683)
                      +.|||++.+......+...              ..+....|.|.+.-|......+.+..|+++.+....+.-+-      
T Consensus       182 lSVWdWqk~~~~~~vk~sn--------------e~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~f------  241 (626)
T KOG2106|consen  182 LSVWDWQKKAKLGPVKTSN--------------EVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIF------  241 (626)
T ss_pred             cchhhchhhhccCcceecc--------------ceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeecc------
Confidence            9999999886655444332              56777889997777777777788999988776533221110      


Q ss_pred             eEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeec-CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeee
Q psy15995        189 KDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISG-QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT  267 (683)
Q Consensus       189 ~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  267 (683)
                                                           .. ...-|.|++|.++++  +++|..+|.|.||+..+.+..+.
T Consensus       242 -------------------------------------ek~ekk~Vl~v~F~engd--viTgDS~G~i~Iw~~~~~~~~k~  282 (626)
T KOG2106|consen  242 -------------------------------------EKREKKFVLCVTFLENGD--VITGDSGGNILIWSKGTNRISKQ  282 (626)
T ss_pred             -------------------------------------ccccceEEEEEEEcCCCC--EEeecCCceEEEEeCCCceEEeE
Confidence                                                 01 113477888888886  99999999999999988887777


Q ss_pred             ccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCC
Q psy15995        268 KQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIET  347 (683)
Q Consensus       268 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  347 (683)
                      ...|.+.|.+++...+|. |++|+.|..|..|| .+-+.++..+.|...++|..++-...+  |+.|...+.|..=.+++
T Consensus       283 ~~aH~ggv~~L~~lr~Gt-llSGgKDRki~~Wd-~~y~k~r~~elPe~~G~iRtv~e~~~d--i~vGTtrN~iL~Gt~~~  358 (626)
T KOG2106|consen  283 VHAHDGGVFSLCMLRDGT-LLSGGKDRKIILWD-DNYRKLRETELPEQFGPIRTVAEGKGD--ILVGTTRNFILQGTLEN  358 (626)
T ss_pred             eeecCCceEEEEEecCcc-EeecCccceEEecc-ccccccccccCchhcCCeeEEecCCCc--EEEeeccceEEEeeecC
Confidence            779999999999999997 55599999999999 666777777777788899988755333  78887777777777776


Q ss_pred             CceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEE
Q psy15995        348 KSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFIT  427 (683)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  427 (683)
                      +-.+..+  .+..+...++..|+.+.+++++.++.+++|+ .  .++ .--+.-..++.|+.|+|.| .++.|...|...
T Consensus       359 ~f~~~v~--gh~delwgla~hps~~q~~T~gqdk~v~lW~-~--~k~-~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~  431 (626)
T KOG2106|consen  359 GFTLTVQ--GHGDELWGLATHPSKNQLLTCGQDKHVRLWN-D--HKL-EWTKIIEDPAECADFHPSG-VVAVGTATGRWF  431 (626)
T ss_pred             CceEEEE--ecccceeeEEcCCChhheeeccCcceEEEcc-C--Cce-eEEEEecCceeEeeccCcc-eEEEeeccceEE
Confidence            6554443  4445778889999999999999999999999 2  222 2223346789999999999 999999999999


Q ss_pred             EEcCCCCCcceeccCCCCcceeEEEEe--CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEece
Q psy15995        428 RWNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQ  505 (683)
Q Consensus       428 ~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (683)
                      +.|.++...+.....  ..++..+.++  |.+|+.++.|+.|++|.+..+...-                          
T Consensus       432 V~d~e~~~lv~~~~d--~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y--------------------------  483 (626)
T KOG2106|consen  432 VLDTETQDLVTIHTD--NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKY--------------------------  483 (626)
T ss_pred             EEecccceeEEEEec--CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEE--------------------------
Confidence            999999666555433  7778888877  9999999999999999988664311                          


Q ss_pred             EEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcce----------e-------ecCCcCee
Q psy15995        506 ISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKA----------E-------LDHLGPVT  568 (683)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----------~-------~~~~~~v~  568 (683)
                             .+.... ...+++.+.|++|++++.+.+.|-.|..|.....+.....          .       ..+...|.
T Consensus       484 -------~r~~k~-~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~  555 (626)
T KOG2106|consen  484 -------SRVGKC-SGSPITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDIN  555 (626)
T ss_pred             -------EEeeee-cCceeEEeeecCCCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHH
Confidence                   111111 2267899999999999999999999999944332211100          0       12455677


Q ss_pred             EEEECCCCCEEEEEeCCCeEEEEECCCCccc-cccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeC
Q psy15995        569 DCSFSPSNEYLVASDAHRKVVLYRVPDFELA-HNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSL  637 (683)
Q Consensus       569 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~  637 (683)
                      .++-+.+.+.+|+|.+.|+|++|..+-.+.. ...++.+|++.|++++|+-+...|++.+.|..|..|++
T Consensus       556 a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~l  625 (626)
T KOG2106|consen  556 AVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKDSHLISTGKDTSIMQWRL  625 (626)
T ss_pred             HhhhhhhhhhhhccccCceEEEEccccCCCcccceeeccccceeEEEEEeeCCceEEecCCCceEEEEEe
Confidence            7788889999999999999999998854433 34566779999999999998888888889999999986

>KOG0292|consensus

Probab=100.00  E-value=6.1e-35  Score=277.30  Aligned_cols=497  Identities=14%  Similarity=0.214  Sum_probs=360.0

Q ss_pred             CCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccc
Q psy15995         45 GQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKN  123 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~  123 (683)
                      .++-.++|+|...++.++ -.|.|.+||..-+.++..|.+|.++|..++|.|++.+++||++|-+|+||+..+.+++.++
T Consensus        10 sRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL   89 (1202)
T KOG0292|consen   10 SRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTL   89 (1202)
T ss_pred             ccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhh
Confidence            466678999999999998 5789999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEE
Q psy15995        124 EFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV  203 (683)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  203 (683)
                      .+|-              .-|+.+.|.+.-.++++++.|.+|+||+..+++++.  .+.+|..-|.|.+|.|....++++
T Consensus        90 ~GHl--------------DYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~ia--vltGHnHYVMcAqFhptEDlIVSa  153 (1202)
T KOG0292|consen   90 LGHL--------------DYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIA--VLTGHNHYVMCAQFHPTEDLIVSA  153 (1202)
T ss_pred             cccc--------------ceeEEeeccCCCceEEEccCCCeEEEEeccCCceEE--EEecCceEEEeeccCCccceEEEe
Confidence            9886              789999999999999999999999999999999774  456778899999999999999998


Q ss_pred             ecCCceEEEEEEccC--------C---------------------CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeE
Q psy15995        204 GEGRERFGHVFMSET--------G---------------------TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTI  254 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~--------~---------------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i  254 (683)
                      +-+..  +++|+..-        +                     -....+.||...|+.++|+|.-+. +++|+.|..|
T Consensus       154 SLDQT--VRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpl-iVSG~DDRqV  230 (1202)
T KOG0292|consen  154 SLDQT--VRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPL-IVSGADDRQV  230 (1202)
T ss_pred             cccce--EEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcce-EEecCCccee
Confidence            87765  78888741        1                     012346899999999999999994 9999999999


Q ss_pred             EEEcCCCCc--eeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEE
Q psy15995        255 AVFEGPPFK--FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL  332 (683)
Q Consensus       255 ~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  332 (683)
                      ++|.+...+  .+-+..+|.+.|.++-|+|..+.+++.+.|++|++||+.....++.+..  ..+....++-+|..++++
T Consensus       231 KlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrr--endRFW~laahP~lNLfA  308 (1202)
T KOG0292|consen  231 KLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRR--ENDRFWILAAHPELNLFA  308 (1202)
T ss_pred             eEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeec--cCCeEEEEEecCCcceee
Confidence            999977655  3456789999999999999999999999999999999999999999975  778899999999999777


Q ss_pred             EEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCc-ceeeeeec---cccEEEE
Q psy15995        333 TASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPST-PIRVIKGH---NKPITAL  408 (683)
Q Consensus       333 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~-~~~~~~~~---~~~v~~~  408 (683)
                      +|. |+-+.+|.++..++....               +++.++..- +..|+.+|+..... .+..++..   ..++.++
T Consensus       309 AgH-DsGm~VFkleRErpa~~v---------------~~n~LfYvk-d~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~sm  371 (1202)
T KOG0292|consen  309 AGH-DSGMIVFKLERERPAYAV---------------NGNGLFYVK-DRFIRSYDLRTQKDTAVASLRRPGTLWQPPRSL  371 (1202)
T ss_pred             eec-CCceEEEEEcccCceEEE---------------cCCEEEEEc-cceEEeeeccccccceeEeccCCCcccCCccee
Confidence            765 555778888755543322               444454444 88899999886332 22233322   3678899


Q ss_pred             EEeCCCCEEEEEe-C-CCcEEEEcCCCCCcceec--cCCCCcceeEEEEeCCeEEEEEc-CCeEEEEeCCCCcccCCcee
Q psy15995        409 ALSPDRGTVFTGS-H-DGFITRWNAKTGENDRVQ--GAGHGNQINGMKATGELLYTCGI-DDTIKQVDLSSNAYSGPEVK  483 (683)
Q Consensus       409 ~~~~~~~~l~~~~-~-dg~i~~w~~~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~-d~~i~~~~~~~~~~~~~~~~  483 (683)
                      .++|..+.+..++ . .|.--++.+.........  ..........+-...+.++.-.. +..+.+-++.+.        
T Consensus       372 sYNpae~~vlics~~~n~~y~L~~ipk~~~~~~~~~~~~k~tG~~a~fvarNrfavl~k~~~~v~ik~l~N~--------  443 (1202)
T KOG0292|consen  372 SYNPAENAVLICSNLDNGEYELVQIPKDSDGVSDGKDVKKGTGEGALFVARNRFAVLDKSNEQVVIKNLKNK--------  443 (1202)
T ss_pred             eeccccCeEEEEeccCCCeEEEEEecCcccccCCchhhhcCCCCceEEEEecceEEEEecCcceEEecccch--------
Confidence            9999766555443 2 334444444332111110  00111122222222223322222 333333333322        


Q ss_pred             cCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecC
Q psy15995        484 LGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDH  563 (683)
Q Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  563 (683)
                                                    ....++.......+-+...|.+|+.  ....|.+||++.+.......   
T Consensus       444 ------------------------------vtkkl~~~~~~~~IF~ag~g~lll~--~~~~v~lfdvQq~~~~~si~---  488 (1202)
T KOG0292|consen  444 ------------------------------VTKKLLLPESTDDIFYAGTGNLLLR--SPDSVTLFDVQQKKKVGSIK---  488 (1202)
T ss_pred             ------------------------------hhhcccCcccccceeeccCccEEEE--cCCeEEEEEeecceEEEEEe---
Confidence                                          1122222223344445555555554  33469999998877654443   


Q ss_pred             CcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEee
Q psy15995        564 LGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGS  627 (683)
Q Consensus       564 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~  627 (683)
                      ...+.-+.||+|..+++--+. .+|.|.+.+-. ++....   ..-.|.+-+|..+|-+|.+..
T Consensus       489 ~s~vkyvvws~dm~~vAll~K-h~i~i~~kkL~-l~~sih---Etiriksgawde~gVfiYtT~  547 (1202)
T KOG0292|consen  489 VSKVKYVVWSNDMSRVALLSK-HTITIADKKLE-LLCSIH---ETIRIKSGAWDEDGVFIYTTL  547 (1202)
T ss_pred             cCceeEEEEcCccchhhhccc-ceEEEEecchh-heecch---heeEeeeceeccCceEEEEeh
Confidence            357888999999988877653 56888876422 221111   234577778887776655543

>KOG0645|consensus

Probab=100.00  E-value=1e-37  Score=255.00  Aligned_cols=298  Identities=18%  Similarity=0.335  Sum_probs=241.4

Q ss_pred             ccccccCcccceEEEEECCC-CcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE
Q psy15995         77 ISDIYTEHSCAVNVAKYSPS-GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY  155 (683)
Q Consensus        77 ~~~~~~~h~~~v~~~~~s~d-~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  155 (683)
                      .++.+++|+++|..++|+|- |..||||+.|..|+||+...+........-          .-.+...|+.++|+|.|++
T Consensus         6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vl----------d~~hkrsVRsvAwsp~g~~   75 (312)
T KOG0645|consen    6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVL----------DDGHKRSVRSVAWSPHGRY   75 (312)
T ss_pred             eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEec----------cccchheeeeeeecCCCcE
Confidence            45678899999999999998 999999999999999999853221111000          0013378999999999999


Q ss_pred             EEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCC---CceeeeecCCcCe
Q psy15995        156 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG---TSVGEISGQSKPI  232 (683)
Q Consensus       156 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v  232 (683)
                      ||+++.|.++.||.-..++......+.+|...|.+++|+++|.+||+++.++.  +.+|..+.+   ++...+++|...|
T Consensus        76 La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKS--VWiWe~deddEfec~aVL~~HtqDV  153 (312)
T KOG0645|consen   76 LASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKS--VWIWEIDEDDEFECIAVLQEHTQDV  153 (312)
T ss_pred             EEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCe--EEEEEecCCCcEEEEeeeccccccc
Confidence            99999999999999998887777888999999999999999999999998863  334443322   4677899999999


Q ss_pred             EEEEeecCCCeEEEEeeCCCeEEEEcCC---CCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEe
Q psy15995        233 NSCDFKPSRPFRIITGSEDNTIAVFEGP---PFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSE  309 (683)
Q Consensus       233 ~~~~~~~~~~~~l~~~~~d~~i~iw~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~  309 (683)
                      ..+.|+|... +|++++.|++|++|+-.   ...+.+++.+|...|.+++|++.|..|++++.|++++||...+.     
T Consensus       154 K~V~WHPt~d-lL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~-----  227 (312)
T KOG0645|consen  154 KHVIWHPTED-LLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD-----  227 (312)
T ss_pred             cEEEEcCCcc-eeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC-----
Confidence            9999999888 49999999999999755   45688999999999999999999999999999999999986521     


Q ss_pred             ccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecC
Q psy15995        310 LGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVN  389 (683)
Q Consensus       310 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~  389 (683)
                      +. ..|...++.+.|.  ...|++++.|+.|+++.-.....-..+                                   
T Consensus       228 ~~-~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~-----------------------------------  269 (312)
T KOG0645|consen  228 LS-GMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSW-----------------------------------  269 (312)
T ss_pred             cc-hhcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchH-----------------------------------
Confidence            21 1288899999998  557999999999999976632111111                                   


Q ss_pred             CCCcceeeeeeccccEEEEEEeCC-CCEEEEEeCCCcEEEEcCC
Q psy15995        390 NPSTPIRVIKGHNKPITALALSPD-RGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       390 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~w~~~  432 (683)
                        ......-..|...|++++|.|. .+.|++++.||.|++|.+.
T Consensus       270 --~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  270 --NLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             --HHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence              1112234568889999999994 7899999999999999864

>KOG0292|consensus

Probab=100.00  E-value=3.5e-35  Score=278.95  Aligned_cols=318  Identities=18%  Similarity=0.299  Sum_probs=268.5

Q ss_pred             cccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEee
Q psy15995         80 IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASG  159 (683)
Q Consensus        80 ~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  159 (683)
                      .|+..+.+|..++|.|...++.++-..|.|.+||..-+.++.++..|.              .+|+.+.|.|++.++++|
T Consensus         4 kfEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHd--------------GpVRgv~FH~~qplFVSG   69 (1202)
T KOG0292|consen    4 KFESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHD--------------GPVRGVDFHPTQPLFVSG   69 (1202)
T ss_pred             hhhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccC--------------CccceeeecCCCCeEEec
Confidence            466678899999999999999999999999999999999999999987              889999999999999999


Q ss_pred             cCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeec
Q psy15995        160 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKP  239 (683)
Q Consensus       160 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  239 (683)
                      +.|..|++|+..+.+++  +++.+|..-|..+.|++.-..+++++++..  +++|+|.+++++..+.||...|.|..|+|
T Consensus        70 GDDykIkVWnYk~rrcl--ftL~GHlDYVRt~~FHheyPWIlSASDDQT--IrIWNwqsr~~iavltGHnHYVMcAqFhp  145 (1202)
T KOG0292|consen   70 GDDYKIKVWNYKTRRCL--FTLLGHLDYVRTVFFHHEYPWILSASDDQT--IRIWNWQSRKCIAVLTGHNHYVMCAQFHP  145 (1202)
T ss_pred             CCccEEEEEecccceeh--hhhccccceeEEeeccCCCceEEEccCCCe--EEEEeccCCceEEEEecCceEEEeeccCC
Confidence            99999999999998855  667788999999999999999999998865  89999999999999999999999999999


Q ss_pred             CCCeEEEEeeCCCeEEEEcCCCCc-----------------------------eeeeccccccCeEEEEECCCCCEEEEE
Q psy15995        240 SRPFRIITGSEDNTIAVFEGPPFK-----------------------------FKMTKQEHSRFVQAVRYSPSGSHFASA  290 (683)
Q Consensus       240 ~~~~~l~~~~~d~~i~iw~~~~~~-----------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~  290 (683)
                      .... +++++-|.+|++||+...+                             ..+.+.+|...|+-++|+|.-..+++|
T Consensus       146 tEDl-IVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG  224 (1202)
T KOG0292|consen  146 TEDL-IVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSG  224 (1202)
T ss_pred             ccce-EEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEec
Confidence            8884 9999999999999954211                             234567899999999999999999999


Q ss_pred             cCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEec
Q psy15995        291 GFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ  370 (683)
Q Consensus       291 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (683)
                      +.|..|++|....-+.-..-...+|.+.|.++-|+|..+++++.++|++|++||+...+.++++                
T Consensus       225 ~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tf----------------  288 (1202)
T KOG0292|consen  225 ADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTF----------------  288 (1202)
T ss_pred             CCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeee----------------
Confidence            9999999999876665444444569999999999999999999999999999999988777665                


Q ss_pred             CCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeE
Q psy15995        371 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQING  450 (683)
Q Consensus       371 ~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~  450 (683)
                                                  +...+..+.++.+|..++++.| .|+-+.+|.++...+             +
T Consensus       289 ----------------------------rrendRFW~laahP~lNLfAAg-HDsGm~VFkleRErp-------------a  326 (1202)
T KOG0292|consen  289 ----------------------------RRENDRFWILAAHPELNLFAAG-HDSGMIVFKLERERP-------------A  326 (1202)
T ss_pred             ----------------------------eccCCeEEEEEecCCcceeeee-cCCceEEEEEcccCc-------------e
Confidence                                        3345667788888888777766 455566776654332             2


Q ss_pred             EEEeCCeEEEEEcCCeEEEEeCCCC
Q psy15995        451 MKATGELLYTCGIDDTIKQVDLSSN  475 (683)
Q Consensus       451 ~~~~~~~l~~~~~d~~i~~~~~~~~  475 (683)
                      .+.+++.|+-.- |..|+.+|+.+.
T Consensus       327 ~~v~~n~LfYvk-d~~i~~~d~~t~  350 (1202)
T KOG0292|consen  327 YAVNGNGLFYVK-DRFIRSYDLRTQ  350 (1202)
T ss_pred             EEEcCCEEEEEc-cceEEeeecccc
Confidence            333445554444 788888888774

>KOG0295|consensus

Probab=100.00  E-value=2.3e-37  Score=263.79  Aligned_cols=295  Identities=20%  Similarity=0.312  Sum_probs=267.0

Q ss_pred             CCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeecc
Q psy15995         73 ENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI  152 (683)
Q Consensus        73 ~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  152 (683)
                      ....+...+.+|..+|+.+-|.|+-..+|++++|++|++||..+++....+++|.              ..+..++|...
T Consensus        96 pRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt--------------~sv~di~~~a~  161 (406)
T KOG0295|consen   96 PRPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHT--------------DSVFDISFDAS  161 (406)
T ss_pred             CCCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccc--------------cceeEEEEecC
Confidence            3444556688999999999999999999999999999999999999998888887              67999999999


Q ss_pred             ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCe
Q psy15995        153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPI  232 (683)
Q Consensus       153 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  232 (683)
                      |++||+++.|-.+.+||..+.. .......+|...|.+++|-|.|.++++++.++.  +..|+.++|.++.++.+|...|
T Consensus       162 Gk~l~tcSsDl~~~LWd~~~~~-~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~t--ik~We~~tg~cv~t~~~h~ewv  238 (406)
T KOG0295|consen  162 GKYLATCSSDLSAKLWDFDTFF-RCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNT--IKAWECDTGYCVKTFPGHSEWV  238 (406)
T ss_pred             ccEEEecCCccchhheeHHHHH-HHHHHhcCcccceeeEEEEecCCeeeecccccc--eeEEecccceeEEeccCchHhE
Confidence            9999999999999999998742 233456678889999999999999999887765  7899999999999999999999


Q ss_pred             EEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCC---------------CCEEEEEcCCCcEE
Q psy15995        233 NSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPS---------------GSHFASAGFDGKVF  297 (683)
Q Consensus       233 ~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~---------------~~~l~~~~~dg~i~  297 (683)
                      ..++.+.||.. +++++.|.++++|-..++++...++.|+.+|.+++|.|.               ++++.+++.|++|+
T Consensus       239 r~v~v~~DGti-~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk  317 (406)
T KOG0295|consen  239 RMVRVNQDGTI-IASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIK  317 (406)
T ss_pred             EEEEecCCeeE-EEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEE
Confidence            99999999994 999999999999999999999999999999999999873               35899999999999


Q ss_pred             EEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEE
Q psy15995        298 LYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTV  377 (683)
Q Consensus       298 iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  377 (683)
                      +||+.++.++.++..  |...|..++|+|.|++|+++..|+++++||+.++++...                        
T Consensus       318 ~wdv~tg~cL~tL~g--hdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~------------------------  371 (406)
T KOG0295|consen  318 IWDVSTGMCLFTLVG--HDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKT------------------------  371 (406)
T ss_pred             EEeccCCeEEEEEec--ccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeec------------------------
Confidence            999999999999976  999999999999999999999999999999999877544                        


Q ss_pred             ecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcC
Q psy15995        378 SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNA  431 (683)
Q Consensus       378 ~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~  431 (683)
                                          +..|..-++++.|+.+..++++|+-|..+++|..
T Consensus       372 --------------------~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  372 --------------------LEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             --------------------cCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence                                3568888999999999999999999999999974

>KOG0284|consensus

Probab=100.00  E-value=2.4e-38  Score=273.77  Aligned_cols=283  Identities=22%  Similarity=0.422  Sum_probs=249.6

Q ss_pred             CCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccc
Q psy15995         44 RGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILK  122 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~  122 (683)
                      +..+..+.|.|+|+.|+++ ..|.+.+|+..+-.....++.|..+|+++.||++|.+++||+.+|.|++|+..-......
T Consensus        96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~  175 (464)
T KOG0284|consen   96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKII  175 (464)
T ss_pred             ccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHHh
Confidence            3456678899999999988 578999999876666666889999999999999999999999999999999765432222


Q ss_pred             cccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEE
Q psy15995        123 NEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVV  202 (683)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  202 (683)
                      ...+.              ..|++++|+|+...+++++.||+|+|||....+..  ..+.+|.-.|.+++|+|....+++
T Consensus       176 ~ahh~--------------eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee--~vL~GHgwdVksvdWHP~kgLias  239 (464)
T KOG0284|consen  176 QAHHA--------------EAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEE--RVLRGHGWDVKSVDWHPTKGLIAS  239 (464)
T ss_pred             hHhhh--------------hhhheeccCCCCceeEEecCCCeEEEEeccCCchh--heeccCCCCcceeccCCccceeEE
Confidence            22222              68999999999999999999999999999876643  445788899999999999999999


Q ss_pred             EecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECC
Q psy15995        203 VGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSP  282 (683)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~  282 (683)
                      ++.++  .+.+|+.+++.++.++.+|...|..+.|+|++++ |++++.|..++++|+++.+.++.+++|...++++.|+|
T Consensus       240 gskDn--lVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~-Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP  316 (464)
T KOG0284|consen  240 GSKDN--LVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNW-LLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHP  316 (464)
T ss_pred             ccCCc--eeEeecCCCcchhhhhhhccceEEEEEEcCCCCe-eEEccCCceEEEEehhHhHHHHHhhcchhhheeecccc
Confidence            88776  6899999999999999999999999999999985 99999999999999999999999999999999999999


Q ss_pred             CC-CEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECC
Q psy15995        283 SG-SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIE  346 (683)
Q Consensus       283 ~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~  346 (683)
                      -. .+|.+|+.||.|..|.+...+.+..+. ++|...|.+++|+|=|..|++|+.|.++++|.-.
T Consensus       317 ~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~-~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~  380 (464)
T KOG0284|consen  317 LNESLFTSGGSDGSVVHWVVGLEEPLGEIP-PAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN  380 (464)
T ss_pred             ccccceeeccCCCceEEEeccccccccCCC-cccccceeeeeccccceeEeecCCCcceeeeccC
Confidence            54 488899999999999998777777666 5799999999999999999999999999999754

>KOG0284|consensus

Probab=100.00  E-value=3e-38  Score=273.16  Aligned_cols=285  Identities=21%  Similarity=0.396  Sum_probs=249.6

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCc
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISG  163 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~  163 (683)
                      -+.+|..+.|.|+|++|++|+..|.+.+|+..+-.....+..|.              ..|+++.|+++|.++++|+.+|
T Consensus        95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHD--------------s~Vr~m~ws~~g~wmiSgD~gG  160 (464)
T KOG0284|consen   95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHD--------------SPVRTMKWSHNGTWMISGDKGG  160 (464)
T ss_pred             cccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhc--------------ccceeEEEccCCCEEEEcCCCc
Confidence            45689999999999999999999999999985544333344444              7899999999999999999999


Q ss_pred             cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCe
Q psy15995        164 KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPF  243 (683)
Q Consensus       164 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  243 (683)
                      .|++|+..-...  +.....|...|.+++|+|+...++++++++.  +.+|+....+....+.+|.-.|.+++|+|....
T Consensus       161 ~iKyWqpnmnnV--k~~~ahh~eaIRdlafSpnDskF~t~SdDg~--ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgL  236 (464)
T KOG0284|consen  161 MIKYWQPNMNNV--KIIQAHHAEAIRDLAFSPNDSKFLTCSDDGT--IKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGL  236 (464)
T ss_pred             eEEecccchhhh--HHhhHhhhhhhheeccCCCCceeEEecCCCe--EEEEeccCCchhheeccCCCCcceeccCCccce
Confidence            999999876532  2233344589999999999999999888765  789999889999999999999999999999985


Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEE
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVA  323 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~  323 (683)
                       +++++.|..|++||.+++.++.++.+|...|..+.|+|++++|++++.|..++++|+++.+.+..++.  |+..+.++.
T Consensus       237 -iasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~--Hkkdv~~~~  313 (464)
T KOG0284|consen  237 -IASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRG--HKKDVTSLT  313 (464)
T ss_pred             -eEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhc--chhhheeec
Confidence             99999999999999999999999999999999999999999999999999999999998888888876  999999999


Q ss_pred             Ecc-CCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeecc
Q psy15995        324 WKP-DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHN  402 (683)
Q Consensus       324 ~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~  402 (683)
                      |+| ...+|.+++.||.|..|.+...+++..                                           .-.+|.
T Consensus       314 WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~-------------------------------------------i~~AHd  350 (464)
T KOG0284|consen  314 WHPLNESLFTSGGSDGSVVHWVVGLEEPLGE-------------------------------------------IPPAHD  350 (464)
T ss_pred             cccccccceeeccCCCceEEEeccccccccC-------------------------------------------CCcccc
Confidence            999 667889999999999999874433322                                           235699


Q ss_pred             ccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        403 KPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       403 ~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                      ..|++++|+|-|..|++|+.|.++++|.-.
T Consensus       351 ~~iwsl~~hPlGhil~tgsnd~t~rfw~r~  380 (464)
T KOG0284|consen  351 GEIWSLAYHPLGHILATGSNDRTVRFWTRN  380 (464)
T ss_pred             cceeeeeccccceeEeecCCCcceeeeccC
Confidence            999999999999999999999999999743

>KOG0645|consensus

Probab=100.00  E-value=1e-35  Score=243.38  Aligned_cols=291  Identities=22%  Similarity=0.337  Sum_probs=231.9

Q ss_pred             eeeeccccccCeEEEEECCC-CCEEEEEcCCCcEEEEeCCC---CeeEEeccCCccccCeEEEEEccCCCEEEEEECCCc
Q psy15995        264 FKMTKQEHSRFVQAVRYSPS-GSHFASAGFDGKVFLYDGAS---ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKT  339 (683)
Q Consensus       264 ~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  339 (683)
                      ..+.+++|.+.+..++|+|. |..||+++.|..|++|+...   -.+...+. .+|+..|.+++|+|.|++|++++.|.+
T Consensus         6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld-~~hkrsVRsvAwsp~g~~La~aSFD~t   84 (312)
T KOG0645|consen    6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLD-DGHKRSVRSVAWSPHGRYLASASFDAT   84 (312)
T ss_pred             eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEecc-ccchheeeeeeecCCCcEEEEeeccce
Confidence            45677899999999999998 88999999999999999874   34454554 369999999999999999999999999


Q ss_pred             EEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEE
Q psy15995        340 CKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFT  419 (683)
Q Consensus       340 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  419 (683)
                      +.||.-..+.                                          .+.+..+.+|..+|.+++|+++|++||+
T Consensus        85 ~~Iw~k~~~e------------------------------------------fecv~~lEGHEnEVK~Vaws~sG~~LAT  122 (312)
T KOG0645|consen   85 VVIWKKEDGE------------------------------------------FECVATLEGHENEVKCVAWSASGNYLAT  122 (312)
T ss_pred             EEEeecCCCc------------------------------------------eeEEeeeeccccceeEEEEcCCCCEEEE
Confidence            9999766443                                          2335678999999999999999999999


Q ss_pred             EeCCCcEEEEcCCCCCcceec--cCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCe
Q psy15995        420 GSHDGFITRWNAKTGENDRVQ--GAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENT  497 (683)
Q Consensus       420 ~~~dg~i~~w~~~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (683)
                      +++|..|-+|....+......  ..+|                                                     
T Consensus       123 CSRDKSVWiWe~deddEfec~aVL~~H-----------------------------------------------------  149 (312)
T KOG0645|consen  123 CSRDKSVWIWEIDEDDEFECIAVLQEH-----------------------------------------------------  149 (312)
T ss_pred             eeCCCeEEEEEecCCCcEEEEeeeccc-----------------------------------------------------
Confidence            999999999998754432211  1222                                                     


Q ss_pred             EEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcC-CCccCcceee-cCCcCeeEEEECCC
Q psy15995        498 LVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELN-NKSLSPKAEL-DHLGPVTDCSFSPS  575 (683)
Q Consensus       498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~-~~~~~v~~~~~s~~  575 (683)
                                             ...+..+.++|...+|++++.|++|++|.-. .........+ +|...|.+++|++.
T Consensus       150 -----------------------tqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~  206 (312)
T KOG0645|consen  150 -----------------------TQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNI  206 (312)
T ss_pred             -----------------------cccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCC
Confidence                                   2345667788888888888888888888776 4433333333 47789999999999


Q ss_pred             CCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCcee-----eEeecCC
Q psy15995        576 NEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKH-----IIIKNAH  650 (683)
Q Consensus       576 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~-----~~~~~~~  650 (683)
                      |..|++++.|++++||...+.-     .. .|+.++..++|.  ...||+++.|+.|++|.-...-..     ..-....
T Consensus       207 G~rl~s~sdD~tv~Iw~~~~~~-----~~-~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~a  278 (312)
T KOG0645|consen  207 GSRLVSCSDDGTVSIWRLYTDL-----SG-MHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGA  278 (312)
T ss_pred             CceEEEecCCcceEeeeeccCc-----ch-hcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcc
Confidence            9999999999999999976321     11 188999999997  558999999999999987653111     1112334


Q ss_pred             CCCCeeEEEEcc--CCeEEEeeCCCcEEEEeec
Q psy15995        651 PQSQITRLQWLD--NDLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       651 ~~~~v~~l~~~~--~~~l~s~~~d~~v~vw~~~  681 (683)
                      |...|++++|.+  .++|+++|.||.|++|.+.
T Consensus       279 He~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  279 HEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             cccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence            677999999996  6899999999999999985

>KOG0285|consensus

Probab=100.00  E-value=9.2e-37  Score=259.32  Aligned_cols=298  Identities=21%  Similarity=0.302  Sum_probs=262.9

Q ss_pred             ccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEE
Q psy15995         77 ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYI  156 (683)
Q Consensus        77 ~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  156 (683)
                      +.+.+.||.+.|.|+++.|..+++++|+.|++|+|||+.++++..++.+|.              ..+..+++|+--.||
T Consensus       143 l~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi--------------~~vr~vavS~rHpYl  208 (460)
T KOG0285|consen  143 LYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHI--------------ETVRGVAVSKRHPYL  208 (460)
T ss_pred             ehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchh--------------heeeeeeecccCceE
Confidence            456788999999999999999999999999999999999999999888776              789999999999999


Q ss_pred             EeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEE
Q psy15995        157 ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCD  236 (683)
Q Consensus       157 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  236 (683)
                      ++++.|+.|+.||++..+.+  ..+.+|-..|.+++..|.-..|++++.+.  .+++|+..+...+..+.+|..+|..+.
T Consensus       209 Fs~gedk~VKCwDLe~nkvI--R~YhGHlS~V~~L~lhPTldvl~t~grDs--t~RvWDiRtr~~V~~l~GH~~~V~~V~  284 (460)
T KOG0285|consen  209 FSAGEDKQVKCWDLEYNKVI--RHYHGHLSGVYCLDLHPTLDVLVTGGRDS--TIRVWDIRTRASVHVLSGHTNPVASVM  284 (460)
T ss_pred             EEecCCCeeEEEechhhhhH--HHhccccceeEEEeccccceeEEecCCcc--eEEEeeecccceEEEecCCCCcceeEE
Confidence            99999999999999998855  55678889999999999999888877664  489999999999999999999999999


Q ss_pred             eecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccc
Q psy15995        237 FKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHK  316 (683)
Q Consensus       237 ~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~  316 (683)
                      +.|.++. +++|+.|++|++||+..++....+..|...|.+++.+|....+|+++.| .|+-|++..++.+..+..  |.
T Consensus       285 ~~~~dpq-vit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsg--h~  360 (460)
T KOG0285|consen  285 CQPTDPQ-VITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSG--HN  360 (460)
T ss_pred             eecCCCc-eEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhcccc--cc
Confidence            9998885 9999999999999999999999999999999999999999999999976 599999999999998765  99


Q ss_pred             cCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCccee
Q psy15995        317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIR  396 (683)
Q Consensus       317 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~  396 (683)
                      ..|.+++...|+ .+++|+.+|.+.+||.+++...+........                                   .
T Consensus       361 ~iintl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqp-----------------------------------G  404 (460)
T KOG0285|consen  361 AIINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQP-----------------------------------G  404 (460)
T ss_pred             ceeeeeeeccCc-eEEEcCCceEEEEEecCcCcccccccccccC-----------------------------------C
Confidence            999999998775 6889999999999999988765443211000                                   0


Q ss_pred             eeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCC
Q psy15995        397 VIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       397 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~  433 (683)
                      .+ ..+..|.+.+|...|..|++|..|.+|++|.-..
T Consensus       405 Sl-~sEagI~as~fDktg~rlit~eadKtIk~~keDe  440 (460)
T KOG0285|consen  405 SL-ESEAGIFASCFDKTGSRLITGEADKTIKMYKEDE  440 (460)
T ss_pred             cc-ccccceeEEeecccCceEEeccCCcceEEEeccc
Confidence            01 1356789999999999999999999999997543

>KOG0293|consensus

Probab=100.00  E-value=8e-37  Score=264.63  Aligned_cols=292  Identities=20%  Similarity=0.270  Sum_probs=236.8

Q ss_pred             ccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccc---ccccccccCCCCcccceeeeeecceeeeEeeccc
Q psy15995         77 ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH---ILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIG  153 (683)
Q Consensus        77 ~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  153 (683)
                      ..+++..|++.|+-+.||++|+||||++.|.+..||++.....   ..++..|.              .+|..+.||||.
T Consensus       216 t~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~--------------~~V~yi~wSPDd  281 (519)
T KOG0293|consen  216 TWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHS--------------QPVSYIMWSPDD  281 (519)
T ss_pred             hhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeeccc--------------CceEEEEECCCC
Confidence            3456889999999999999999999999999999999876644   44444443              789999999999


Q ss_pred             eEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeE
Q psy15995        154 FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPIN  233 (683)
Q Consensus       154 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  233 (683)
                      ++|++++.+..+.+||+.+|.....+... +.                                            ..+.
T Consensus       282 ryLlaCg~~e~~~lwDv~tgd~~~~y~~~-~~--------------------------------------------~S~~  316 (519)
T KOG0293|consen  282 RYLLACGFDEVLSLWDVDTGDLRHLYPSG-LG--------------------------------------------FSVS  316 (519)
T ss_pred             CeEEecCchHheeeccCCcchhhhhcccC-cC--------------------------------------------CCcc
Confidence            99999999999999999999865443322 22                                            2345


Q ss_pred             EEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc-cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccC
Q psy15995        234 SCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE-HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN  312 (683)
Q Consensus       234 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  312 (683)
                      +++|.||+. .+++|+.|+++..||+.... ....++ ....|.+++..+||+++++.+.|..|++++.++......+. 
T Consensus       317 sc~W~pDg~-~~V~Gs~dr~i~~wdlDgn~-~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis-  393 (519)
T KOG0293|consen  317 SCAWCPDGF-RFVTGSPDRTIIMWDLDGNI-LGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLIS-  393 (519)
T ss_pred             eeEEccCCc-eeEecCCCCcEEEecCCcch-hhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhcccc-
Confidence            666666666 48899999999999975443 333332 23569999999999999999999999999988776665544 


Q ss_pred             CccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEe--cCCEEEEEecCCcEEEEecCC
Q psy15995        313 PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW--QGDYLLTVSLSGFISYLDVNN  390 (683)
Q Consensus       313 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~g~i~~~~~~~  390 (683)
                        ...+|++++.+.|++++++.-.+..+++||++....++.+..........-+|..  +..++++|++|+.|++|+..+
T Consensus       394 --e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~s  471 (519)
T KOG0293|consen  394 --EEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRIS  471 (519)
T ss_pred             --ccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccC
Confidence              6679999999999999999999999999999988887777655444433333333  557999999999999999998


Q ss_pred             CCcceeeeeeccccEEEEEEeCC-CCEEEEEeCCCcEEEEcCCC
Q psy15995        391 PSTPIRVIKGHNKPITALALSPD-RGTVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       391 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~w~~~~  433 (683)
                       +.++..+.+|...|++++|+|. -.++|+++.||+|++|....
T Consensus       472 -gkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  472 -GKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             -CceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence             7788999999999999999994 46789999999999998764

>KOG0263|consensus

Probab=100.00  E-value=4.1e-36  Score=283.04  Aligned_cols=306  Identities=24%  Similarity=0.422  Sum_probs=245.1

Q ss_pred             eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC
Q psy15995        225 ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA  304 (683)
Q Consensus       225 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  304 (683)
                      +......++|..|++++. +++.|..|..|++|.+.+.+... ++. ...+         ..+=+.+.|-.+.+.|..+.
T Consensus       374 ~~nt~~~v~ca~fSddss-mlA~Gf~dS~i~~~Sl~p~kl~~-lk~-~~~l---------~~~d~~sad~~~~~~D~~~~  441 (707)
T KOG0263|consen  374 FHNTYQGVTCAEFSDDSS-MLACGFVDSSVRVWSLTPKKLKK-LKD-ASDL---------SNIDTESADVDVDMLDDDSS  441 (707)
T ss_pred             EEEcCCcceeEeecCCcc-hhhccccccEEEEEecchhhhcc-ccc-hhhh---------ccccccccchhhhhccccCC
Confidence            344456789999999999 59999999999999987654322 221 1111         11223444555677776666


Q ss_pred             eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEE
Q psy15995        305 DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFIS  384 (683)
Q Consensus       305 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~  384 (683)
                      .....+..  |.++|..+.|+|+.++|+++++|+++++|.+.+...+-                                
T Consensus       442 ~~~~~L~G--H~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V--------------------------------  487 (707)
T KOG0263|consen  442 GTSRTLYG--HSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLV--------------------------------  487 (707)
T ss_pred             ceeEEeec--CCCceeeeeecccccceeeccCCcceeeeecccceeEE--------------------------------
Confidence            66666654  99999999999999999999999999999999876543                                


Q ss_pred             EEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcC
Q psy15995        385 YLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGID  464 (683)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d  464 (683)
                                  .+++|..+|+.+.|+|.|-++|+++.|++-++|......+.+.+ .+|-                   
T Consensus       488 ------------~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRif-aghl-------------------  535 (707)
T KOG0263|consen  488 ------------IYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIF-AGHL-------------------  535 (707)
T ss_pred             ------------EecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhh-cccc-------------------
Confidence                        35689999999999999999999999999999998887766665 2332                   


Q ss_pred             CeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCc
Q psy15995        465 DTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSK  544 (683)
Q Consensus       465 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~  544 (683)
                                                                               ..+.|+.|+|+..|+++|+.|.+
T Consensus       536 ---------------------------------------------------------sDV~cv~FHPNs~Y~aTGSsD~t  558 (707)
T KOG0263|consen  536 ---------------------------------------------------------SDVDCVSFHPNSNYVATGSSDRT  558 (707)
T ss_pred             ---------------------------------------------------------cccceEEECCcccccccCCCCce
Confidence                                                                     35678899999999999999999


Q ss_pred             EEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEE
Q psy15995        545 VHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVA  624 (683)
Q Consensus       545 i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~  624 (683)
                      |++||..++..+ +...+|.++|++++|||+|++|++|+.||.|.+||+.+++++....  +|.+.|.++.||.||..||
T Consensus       559 VRlWDv~~G~~V-RiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~--~Ht~ti~SlsFS~dg~vLa  635 (707)
T KOG0263|consen  559 VRLWDVSTGNSV-RIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLK--GHTGTIYSLSFSRDGNVLA  635 (707)
T ss_pred             EEEEEcCCCcEE-EEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhh--cccCceeEEEEecCCCEEE
Confidence            999999999887 5556899999999999999999999999999999999999875443  3999999999999999999


Q ss_pred             EeecCCcEEEEeCCCCcee------------------------eEeecCCCCCCeeEEEEccCCeEEEee
Q psy15995        625 SGSLDTTIIIWSLASPAKH------------------------IIIKNAHPQSQITRLQWLDNDLLVSVG  670 (683)
Q Consensus       625 ~~~~d~~v~iw~~~~~~~~------------------------~~~~~~~~~~~v~~l~~~~~~~l~s~~  670 (683)
                      +|+.|++|++||+......                        ..+..  ...+|.+|.|.-.++++..|
T Consensus       636 sgg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~t--K~tpv~~l~FtrrNl~L~~g  703 (707)
T KOG0263|consen  636 SGGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSFYT--KNTPVVGLHFTRRNLLLAVG  703 (707)
T ss_pred             ecCCCCeEEEEEchhhcccccccccccccccccccCCCCcceeeeeee--cCceEEEEEEeccceeEEec
Confidence            9999999999998654333                        22222  35688888888555544433

>KOG0282|consensus

Probab=100.00  E-value=2.3e-36  Score=267.64  Aligned_cols=293  Identities=20%  Similarity=0.303  Sum_probs=249.6

Q ss_pred             CCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC-CceeeeccccccCeEEEEECCCCCEEEEEcCCCcEE
Q psy15995        219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP-FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVF  297 (683)
Q Consensus       219 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  297 (683)
                      .+.+..+.+|...|+++.|.|....+|++++.|+.|+||++.. +++++++.+|..+|.+++|+++|..+++++.|+.++
T Consensus       204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lK  283 (503)
T KOG0282|consen  204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLK  283 (503)
T ss_pred             HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeee
Confidence            4567788999999999999995555799999999999999776 889999999999999999999999999999999999


Q ss_pred             EEeCCCCeeEEeccCCccccCeEEEEEccCC-CEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEE
Q psy15995        298 LYDGASADLVSELGNPAHKGGVYAVAWKPDG-TQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLT  376 (683)
Q Consensus       298 iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  376 (683)
                      +||+++|+++..+.   ....++++.|.|++ +.+++|+.|+.|+.||+++++.+++                       
T Consensus       284 lwDtETG~~~~~f~---~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqe-----------------------  337 (503)
T KOG0282|consen  284 LWDTETGQVLSRFH---LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQE-----------------------  337 (503)
T ss_pred             eeccccceEEEEEe---cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHH-----------------------
Confidence            99999999999986   56688999999988 8899999999999999999886544                       


Q ss_pred             EecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCC
Q psy15995        377 VSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGE  456 (683)
Q Consensus       377 ~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~  456 (683)
                                           +..|-+.|..+.|-++++++++.+.|+++++|+.+..-.+......+            
T Consensus       338 ---------------------Yd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~------------  384 (503)
T KOG0282|consen  338 ---------------------YDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPE------------  384 (503)
T ss_pred             ---------------------HHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchh------------
Confidence                                 45688899999999999999999999999999988766554432111            


Q ss_pred             eEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEE
Q psy15995        457 LLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLV  536 (683)
Q Consensus       457 ~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  536 (683)
                                                                                      .....++..+|+++++
T Consensus       385 ----------------------------------------------------------------~hsmP~~~~~P~~~~~  400 (503)
T KOG0282|consen  385 ----------------------------------------------------------------MHTMPCLTLHPNGKWF  400 (503)
T ss_pred             ----------------------------------------------------------------hccCcceecCCCCCee
Confidence                                                                            1134678899999999


Q ss_pred             EEEcCCCcEEEEEcCCCccCc--ceeecC--CcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEE
Q psy15995        537 AVGGADSKVHIYELNNKSLSP--KAELDH--LGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVN  612 (683)
Q Consensus       537 ~~~~~dg~i~i~d~~~~~~~~--~~~~~~--~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~  612 (683)
                      +.-+.|+.|.+|.+...-...  +...+|  .+.-..+.|||||++|++|+.||.+.+||.++.+++.....  |.+++.
T Consensus       401 ~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lka--h~~~ci  478 (503)
T KOG0282|consen  401 AAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKA--HDQPCI  478 (503)
T ss_pred             hhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhcccc--CCcceE
Confidence            999999999999875432221  122233  34567889999999999999999999999999988765444  999999


Q ss_pred             EEEecCC-CCeEEEeecCCcEEEEe
Q psy15995        613 CVAWSPD-SALVASGSLDTTIIIWS  636 (683)
Q Consensus       613 ~~~~s~d-~~~l~~~~~d~~v~iw~  636 (683)
                      .+.|+|. ...+|+++.||.|++|+
T Consensus       479 ~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  479 GVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             EEEecCCCcceeEecccCceeEecC
Confidence            9999995 46799999999999996

>KOG0263|consensus

Probab=100.00  E-value=1.1e-35  Score=280.11  Aligned_cols=262  Identities=19%  Similarity=0.333  Sum_probs=226.3

Q ss_pred             ccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc--------ccccccc---------ccCCCCcccceeeeeecc
Q psy15995         81 YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE--------HILKNEF---------HPIGGPIKDIGTLLSLTS  143 (683)
Q Consensus        81 ~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~--------~~~~~~~---------~~~~~~~~~~~~~~~~~~  143 (683)
                      +..-...++|..||+|++.||.|-.|..|++|.+...+        .+.....         ...........-..|..+
T Consensus       374 ~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GP  453 (707)
T KOG0263|consen  374 FHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGP  453 (707)
T ss_pred             EEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCc
Confidence            33445689999999999999999999999999998532        1111100         000000111112345678


Q ss_pred             eeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCcee
Q psy15995        144 IRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVG  223 (683)
Q Consensus       144 i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  223 (683)
                      |-...|+|+.++|+++++|+++|+|.+.+..++..+  .+|..+|..+.|+|.|-++|+++.++.  ..+|..+...+++
T Consensus       454 Vyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y--~GH~~PVwdV~F~P~GyYFatas~D~t--ArLWs~d~~~PlR  529 (707)
T KOG0263|consen  454 VYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIY--KGHLAPVWDVQFAPRGYYFATASHDQT--ARLWSTDHNKPLR  529 (707)
T ss_pred             eeeeeecccccceeeccCCcceeeeecccceeEEEe--cCCCcceeeEEecCCceEEEecCCCce--eeeeecccCCchh
Confidence            999999999999999999999999999998876544  488899999999999999999976654  6899999999999


Q ss_pred             eeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCC
Q psy15995        224 EISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS  303 (683)
Q Consensus       224 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  303 (683)
                      .+.+|-..|.|+.|+|+..| +++|+.|.++++||..++..++.+.+|.++|.+++|||+|++|++|+.||.|.+||+.+
T Consensus       530 ifaghlsDV~cv~FHPNs~Y-~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~  608 (707)
T KOG0263|consen  530 IFAGHLSDVDCVSFHPNSNY-VATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLAN  608 (707)
T ss_pred             hhcccccccceEEECCcccc-cccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCC
Confidence            99999999999999999997 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCc
Q psy15995        304 ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       304 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      ++.+..+..  |.+.|.++.|+.+|..|++++.|.+|++||+....
T Consensus       609 ~~~v~~l~~--Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~  652 (707)
T KOG0263|consen  609 GSLVKQLKG--HTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVI  652 (707)
T ss_pred             Ccchhhhhc--ccCceeEEEEecCCCEEEecCCCCeEEEEEchhhc
Confidence            999999976  99999999999999999999999999999987543

>KOG0293|consensus

Probab=100.00  E-value=1.4e-35  Score=256.93  Aligned_cols=293  Identities=20%  Similarity=0.304  Sum_probs=240.2

Q ss_pred             ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCe---eEEeccCCccccCeEEEEEccCCCEEEEEECCCc
Q psy15995        263 KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASAD---LVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKT  339 (683)
Q Consensus       263 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  339 (683)
                      +..+.+..|.++|+.+.||++|++||+++.|.+..+|++....   ...++..  |..+|..+.|+||.++|++|+.+..
T Consensus       215 qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvg--h~~~V~yi~wSPDdryLlaCg~~e~  292 (519)
T KOG0293|consen  215 QTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVG--HSQPVSYIMWSPDDRYLLACGFDEV  292 (519)
T ss_pred             hhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeec--ccCceEEEEECCCCCeEEecCchHh
Confidence            3456678899999999999999999999999999999876543   3555544  9999999999999999999999999


Q ss_pred             EEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEE
Q psy15995        340 CKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFT  419 (683)
Q Consensus       340 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  419 (683)
                      +.+||..++.....+.                                           .++...+.+++|.|||..+++
T Consensus       293 ~~lwDv~tgd~~~~y~-------------------------------------------~~~~~S~~sc~W~pDg~~~V~  329 (519)
T KOG0293|consen  293 LSLWDVDTGDLRHLYP-------------------------------------------SGLGFSVSSCAWCPDGFRFVT  329 (519)
T ss_pred             eeeccCCcchhhhhcc-------------------------------------------cCcCCCcceeEEccCCceeEe
Confidence            9999999998765442                                           224567899999999999999


Q ss_pred             EeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEE
Q psy15995        420 GSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLV  499 (683)
Q Consensus       420 ~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (683)
                      |+.|+.+..||+.......                               |.-..                         
T Consensus       330 Gs~dr~i~~wdlDgn~~~~-------------------------------W~gvr-------------------------  353 (519)
T KOG0293|consen  330 GSPDRTIIMWDLDGNILGN-------------------------------WEGVR-------------------------  353 (519)
T ss_pred             cCCCCcEEEecCCcchhhc-------------------------------ccccc-------------------------
Confidence            9999999999987544211                               11000                         


Q ss_pred             EEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEE
Q psy15995        500 TVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYL  579 (683)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  579 (683)
                                           ...+.++++++||+++++.+.|..|++|+.++.....  ......+|+++..|.|++++
T Consensus       354 ---------------------~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~--lise~~~its~~iS~d~k~~  410 (519)
T KOG0293|consen  354 ---------------------DPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRG--LISEEQPITSFSISKDGKLA  410 (519)
T ss_pred             ---------------------cceeEEEEEcCCCcEEEEEecccceeeechhhhhhhc--cccccCceeEEEEcCCCcEE
Confidence                                 0136789999999999999999999999988765442  23456789999999999999


Q ss_pred             EEEeCCCeEEEEECCCCccccccceeeeccc--EEEEEecC-CCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCee
Q psy15995        580 VASDAHRKVVLYRVPDFELAHNKEWGFHSAK--VNCVAWSP-DSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQIT  656 (683)
Q Consensus       580 ~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~--v~~~~~s~-d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~  656 (683)
                      ++.-.+..+++||++..+++....  ||...  +-.-||-- +..++|+|++|+.|+||+..+++.+..+.+  |...|+
T Consensus       411 LvnL~~qei~LWDl~e~~lv~kY~--Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsG--Hs~~vN  486 (519)
T KOG0293|consen  411 LVNLQDQEIHLWDLEENKLVRKYF--GHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSG--HSKTVN  486 (519)
T ss_pred             EEEcccCeeEEeecchhhHHHHhh--cccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecC--Ccceee
Confidence            999999999999999777664432  35443  44445643 568999999999999999999999999977  899999


Q ss_pred             EEEEc--cCCeEEEeeCCCcEEEEeeccC
Q psy15995        657 RLQWL--DNDLLVSVGQDCNTKIWEIAPF  683 (683)
Q Consensus       657 ~l~~~--~~~~l~s~~~d~~v~vw~~~~~  683 (683)
                      +++|.  +...++++|.||+|++|...++
T Consensus       487 cVswNP~~p~m~ASasDDgtIRIWg~~~~  515 (519)
T KOG0293|consen  487 CVSWNPADPEMFASASDDGTIRIWGPSDN  515 (519)
T ss_pred             EEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence            99999  5569999999999999998753

>KOG0285|consensus

Probab=100.00  E-value=5.2e-35  Score=248.70  Aligned_cols=298  Identities=24%  Similarity=0.308  Sum_probs=261.4

Q ss_pred             CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEE
Q psy15995        220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLY  299 (683)
Q Consensus       220 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  299 (683)
                      +..+.+.+|.+.|.++++.|.+.+ +++|+.|++++|||+.++++..++.+|-..|..+++|+...++++++.|+.|+.|
T Consensus       142 Kl~rVi~gHlgWVr~vavdP~n~w-f~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCw  220 (460)
T KOG0285|consen  142 KLYRVISGHLGWVRSVAVDPGNEW-FATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCW  220 (460)
T ss_pred             eehhhhhhccceEEEEeeCCCcee-EEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEE
Confidence            445678899999999999999886 9999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEec
Q psy15995        300 DGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSL  379 (683)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  379 (683)
                      |++..+.++.+.+  |-..|.+++.+|.-+.|++++.|..+++||+++...+..+. ++......+.+.+-+..+++++.
T Consensus       221 DLe~nkvIR~YhG--HlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~-GH~~~V~~V~~~~~dpqvit~S~  297 (460)
T KOG0285|consen  221 DLEYNKVIRHYHG--HLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLS-GHTNPVASVMCQPTDPQVITGSH  297 (460)
T ss_pred             echhhhhHHHhcc--ccceeEEEeccccceeEEecCCcceEEEeeecccceEEEec-CCCCcceeEEeecCCCceEEecC
Confidence            9999999999876  99999999999999999999999999999999998887764 56667778888888999999999


Q ss_pred             CCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe-CCeE
Q psy15995        380 SGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT-GELL  458 (683)
Q Consensus       380 ~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l  458 (683)
                      |++|++||+..+ +....+..|+..+.+++.+|....+++++.| .|+-|++..+..... ..+|...+.++..+ .+.+
T Consensus       298 D~tvrlWDl~ag-kt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~n-lsgh~~iintl~~nsD~v~  374 (460)
T KOG0285|consen  298 DSTVRLWDLRAG-KTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQN-LSGHNAIINTLSVNSDGVL  374 (460)
T ss_pred             CceEEEeeeccC-ceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhc-cccccceeeeeeeccCceE
Confidence            999999999984 4456677899999999999999999999887 599999999998888 47899999999998 8899


Q ss_pred             EEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEE
Q psy15995        459 YTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAV  538 (683)
Q Consensus       459 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  538 (683)
                      ++|+.+|.+..||.+++.......                            .....-.+..+..|.+.+|...+..|++
T Consensus       375 ~~G~dng~~~fwdwksg~nyQ~~~----------------------------t~vqpGSl~sEagI~as~fDktg~rlit  426 (460)
T KOG0285|consen  375 VSGGDNGSIMFWDWKSGHNYQRGQ----------------------------TIVQPGSLESEAGIFASCFDKTGSRLIT  426 (460)
T ss_pred             EEcCCceEEEEEecCcCccccccc----------------------------ccccCCccccccceeEEeecccCceEEe
Confidence            999999999999998874322110                            0111223344567889999999999999


Q ss_pred             EcCCCcEEEEEcCC
Q psy15995        539 GGADSKVHIYELNN  552 (683)
Q Consensus       539 ~~~dg~i~i~d~~~  552 (683)
                      |..|.+|++|.-+.
T Consensus       427 ~eadKtIk~~keDe  440 (460)
T KOG0285|consen  427 GEADKTIKMYKEDE  440 (460)
T ss_pred             ccCCcceEEEeccc
Confidence            99999999997654

>KOG0265|consensus

Probab=100.00  E-value=2e-34  Score=239.52  Aligned_cols=287  Identities=22%  Similarity=0.316  Sum_probs=246.0

Q ss_pred             eecCCCcccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCC-CCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEE
Q psy15995         35 IFATLPRTQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIE-NPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIW  112 (683)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~-~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iw  112 (683)
                      .+......+++.+..+.|+|+|..||++ .|..|.+|+.. .-+-...+++|+++|..+.|.+|+..|++++.|.+|+.|
T Consensus        38 ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~w  117 (338)
T KOG0265|consen   38 APIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGW  117 (338)
T ss_pred             chhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEE
Confidence            3444455678999999999999999998 68999999954 445566788999999999999999999999999999999


Q ss_pred             eCCCcccccccccccCCCCcccceeeeeecceeeeEeeccc-eEEEeecCCccEEEEeccccceeeeccccccCCCeeEE
Q psy15995        113 DTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIG-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDI  191 (683)
Q Consensus       113 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~  191 (683)
                      |.++|+..++.+.|.              .-++.+.-+.-| .++.+++.|+++++||+.+++.+..+.   ...+++++
T Consensus       118 D~~tG~~~rk~k~h~--------------~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~---~kyqltAv  180 (338)
T KOG0265|consen  118 DAETGKRIRKHKGHT--------------SFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE---NKYQLTAV  180 (338)
T ss_pred             ecccceeeehhcccc--------------ceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc---cceeEEEE
Confidence            999999999998886              556666644444 366788999999999999877654443   23789999


Q ss_pred             EEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc----eeee
Q psy15995        192 AWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK----FKMT  267 (683)
Q Consensus       192 ~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~----~~~~  267 (683)
                      .|..++..+.+++-+++  +.+|+...+.....+.||.+.|+.+..+|+|.+ +.+-+.|.++++||.+...    ++..
T Consensus       181 ~f~d~s~qv~sggIdn~--ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~-llsnsMd~tvrvwd~rp~~p~~R~v~i  257 (338)
T KOG0265|consen  181 GFKDTSDQVISGGIDND--IKVWDLRKNDGLYTLSGHADTITGLSLSRYGSF-LLSNSMDNTVRVWDVRPFAPSQRCVKI  257 (338)
T ss_pred             EecccccceeeccccCc--eeeeccccCcceEEeecccCceeeEEeccCCCc-cccccccceEEEEEecccCCCCceEEE
Confidence            99999999999988766  789999999999999999999999999999996 9999999999999977543    3555


Q ss_pred             ccccc----cCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEE
Q psy15995        268 KQEHS----RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLW  343 (683)
Q Consensus       268 ~~~~~----~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw  343 (683)
                      +.+|.    .....++|+|+++.+.+|+.|..+++||......+..+..  |.+.|.++.|+|....+.+++.|.+|.+=
T Consensus       258 f~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpG--h~gsvn~~~Fhp~e~iils~~sdk~i~lg  335 (338)
T KOG0265|consen  258 FQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPG--HYGSVNEVDFHPTEPIILSCSSDKTIYLG  335 (338)
T ss_pred             eecchhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCC--cceeEEEeeecCCCcEEEEeccCceeEee
Confidence            55543    2346789999999999999999999999988888888865  99999999999999999999999998764

>KOG0265|consensus

Probab=100.00  E-value=1.1e-34  Score=240.97  Aligned_cols=297  Identities=20%  Similarity=0.282  Sum_probs=244.7

Q ss_pred             CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcC-CCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEE
Q psy15995        220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG-PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL  298 (683)
Q Consensus       220 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  298 (683)
                      .++..+.+|.+.|..+.|+|+|.. +++|+.|..|.+|+. ..-+....+++|.+.|..+.|.+|++.+++++.|.+++.
T Consensus        38 ap~m~l~gh~geI~~~~F~P~gs~-~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~  116 (338)
T KOG0265|consen   38 APIMLLPGHKGEIYTIKFHPDGSC-FASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRG  116 (338)
T ss_pred             chhhhcCCCcceEEEEEECCCCCe-EeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEE
Confidence            345567899999999999999995 999999999999994 445556677899999999999999999999999999999


Q ss_pred             EeCCCCeeEEeccCCccccCeEEEEEccCC-CEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEE
Q psy15995        299 YDGASADLVSELGNPAHKGGVYAVAWKPDG-TQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTV  377 (683)
Q Consensus       299 w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  377 (683)
                      ||.++|+.++.++.  |..-+..+.-+.-| .++.+++.|+++++||++++..++++.  ...+...+.+...++.+++|
T Consensus       117 wD~~tG~~~rk~k~--h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~--~kyqltAv~f~d~s~qv~sg  192 (338)
T KOG0265|consen  117 WDAETGKRIRKHKG--HTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE--NKYQLTAVGFKDTSDQVISG  192 (338)
T ss_pred             Eecccceeeehhcc--ccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc--cceeEEEEEecccccceeec
Confidence            99999999999987  99999998855444 456778889999999999888777653  34456677777789999999


Q ss_pred             ecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCe
Q psy15995        378 SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGEL  457 (683)
Q Consensus       378 ~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~  457 (683)
                      +-|+.|++||++. ......+.+|.++|+.+..+|+|.++.+-+.|.++++||++........                 
T Consensus       193 gIdn~ikvWd~r~-~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~-----------------  254 (338)
T KOG0265|consen  193 GIDNDIKVWDLRK-NDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRC-----------------  254 (338)
T ss_pred             cccCceeeecccc-CcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCce-----------------
Confidence            9999999999987 5567889999999999999999999999999999999998754322110                 


Q ss_pred             EEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEE
Q psy15995        458 LYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVA  537 (683)
Q Consensus       458 l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  537 (683)
                               |.++.-..                                           ..........+++|++..+.
T Consensus       255 ---------v~if~g~~-------------------------------------------hnfeknlL~cswsp~~~~i~  282 (338)
T KOG0265|consen  255 ---------VKIFQGHI-------------------------------------------HNFEKNLLKCSWSPNGTKIT  282 (338)
T ss_pred             ---------EEEeecch-------------------------------------------hhhhhhcceeeccCCCCccc
Confidence                     11110000                                           00111234578999999999


Q ss_pred             EEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEE
Q psy15995        538 VGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYR  592 (683)
Q Consensus       538 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~  592 (683)
                      .|+.|..+++||......+. ...+|.+.|.+++|+|...+|.+++.|.+|++=+
T Consensus       283 ags~dr~vyvwd~~~r~~ly-klpGh~gsvn~~~Fhp~e~iils~~sdk~i~lge  336 (338)
T KOG0265|consen  283 AGSADRFVYVWDTTSRRILY-KLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGE  336 (338)
T ss_pred             cccccceEEEeecccccEEE-EcCCcceeEEEeeecCCCcEEEEeccCceeEeec
Confidence            99999999999998877663 3347999999999999999999999999988743

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=1e-33  Score=268.36  Aligned_cols=288  Identities=29%  Similarity=0.513  Sum_probs=248.5

Q ss_pred             cccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEE
Q psy15995         78 SDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIA  157 (683)
Q Consensus        78 ~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  157 (683)
                      ++.+++|.++|++++|+|++++|++++.||.|++|++.+++....+..+.              ..+..+.|+|++++|+
T Consensus         2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~l~   67 (289)
T cd00200           2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHT--------------GPVRDVAASADGTYLA   67 (289)
T ss_pred             chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCC--------------cceeEEEECCCCCEEE
Confidence            35678999999999999999999999999999999999887555555443              5677999999999999


Q ss_pred             eecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEe
Q psy15995        158 SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDF  237 (683)
Q Consensus       158 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  237 (683)
                      +++.+|.|++||+.+++.+.  .+..+...+.++.|+|+++++++++.++  .+.+|+..+++....+..|...+.++.|
T Consensus        68 ~~~~~~~i~i~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~i~~~~~  143 (289)
T cd00200          68 SGSSDKTIRLWDLETGECVR--TLTGHTSYVSSVAFSPDGRILSSSSRDK--TIKVWDVETGKCLTTLRGHTDWVNSVAF  143 (289)
T ss_pred             EEcCCCeEEEEEcCcccceE--EEeccCCcEEEEEEcCCCCEEEEecCCC--eEEEEECCCcEEEEEeccCCCcEEEEEE
Confidence            99999999999999876443  3445667899999999988777776343  3788888888888889999999999999


Q ss_pred             ecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCcccc
Q psy15995        238 KPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKG  317 (683)
Q Consensus       238 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~  317 (683)
                      +|++.+ +++++.++.+++||.++++....+..|...+.++.|+|+++.+++++.++.+++||+..++.+..+..  |..
T Consensus       144 ~~~~~~-l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~--~~~  220 (289)
T cd00200         144 SPDGTF-VASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRG--HEN  220 (289)
T ss_pred             cCcCCE-EEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhh--cCC
Confidence            999774 77777799999999998888888889999999999999999999999999999999999888887754  888


Q ss_pred             CeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceee
Q psy15995        318 GVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRV  397 (683)
Q Consensus       318 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~  397 (683)
                      .+.+++|+|++.++++++.++.+++|++.+++....                                            
T Consensus       221 ~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~--------------------------------------------  256 (289)
T cd00200         221 GVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQT--------------------------------------------  256 (289)
T ss_pred             ceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEE--------------------------------------------
Confidence            999999999988888888899999999987654433                                            


Q ss_pred             eeeccccEEEEEEeCCCCEEEEEeCCCcEEEEc
Q psy15995        398 IKGHNKPITALALSPDRGTVFTGSHDGFITRWN  430 (683)
Q Consensus       398 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~  430 (683)
                      +..|...+.+++|+|+++.+++++.|+.+++|+
T Consensus       257 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         257 LSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             ccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            235777899999999999999999999999996

>KOG0266|consensus

Probab=100.00  E-value=4e-34  Score=279.82  Aligned_cols=286  Identities=23%  Similarity=0.413  Sum_probs=243.0

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc--cccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE--HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI  161 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  161 (683)
                      |...|.++.|++||+++++++.|+.+++|+..+.+  ....+..|.              ..|..++|+|+++++++++.
T Consensus       158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~--------------~~v~~~~fs~d~~~l~s~s~  223 (456)
T KOG0266|consen  158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHT--------------RGVSDVAFSPDGSYLLSGSD  223 (456)
T ss_pred             ccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccc--------------cceeeeEECCCCcEEEEecC
Confidence            48899999999999999999999999999997776  444443333              77999999999999999999


Q ss_pred             CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCC
Q psy15995        162 SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSR  241 (683)
Q Consensus       162 d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  241 (683)
                      |++|++||+....                                             ..++++.+|...|++++|+|++
T Consensus       224 D~tiriwd~~~~~---------------------------------------------~~~~~l~gH~~~v~~~~f~p~g  258 (456)
T KOG0266|consen  224 DKTLRIWDLKDDG---------------------------------------------RNLKTLKGHSTYVTSVAFSPDG  258 (456)
T ss_pred             CceEEEeeccCCC---------------------------------------------eEEEEecCCCCceEEEEecCCC
Confidence            9999999983321                                             1233456777778888888888


Q ss_pred             CeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCe--eEEeccCCcccc--
Q psy15995        242 PFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASAD--LVSELGNPAHKG--  317 (683)
Q Consensus       242 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~~--  317 (683)
                      + ++++|+.|++|++||++++++...+.+|...|++++|++++++|++++.|+.|++||+.++.  +...+..  +..  
T Consensus       259 ~-~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~--~~~~~  335 (456)
T KOG0266|consen  259 N-LLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSG--AENSA  335 (456)
T ss_pred             C-EEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccC--CCCCC
Confidence            5 59999999999999999999999999999999999999999999999999999999999999  4555554  333  


Q ss_pred             CeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcc--eeceEEEEecCCEEEEEecCCcEEEEecCCCCcce
Q psy15995        318 GVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQV--EDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPI  395 (683)
Q Consensus       318 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~  395 (683)
                      ++.+++|+|++++++++..|+.+++||+..+.....+......  ........+.+.++++++.++.|.+|++.. ...+
T Consensus       336 ~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s-~~~~  414 (456)
T KOG0266|consen  336 PVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSS-GGIL  414 (456)
T ss_pred             ceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCc-cchh
Confidence            6999999999999999999999999999999888877665554  233333456899999999999999999998 6666


Q ss_pred             eeeeec-cccEEEEEEeCCCCEEEEEe--CCCcEEEEcCC
Q psy15995        396 RVIKGH-NKPITALALSPDRGTVFTGS--HDGFITRWNAK  432 (683)
Q Consensus       396 ~~~~~~-~~~v~~~~~~~~~~~l~~~~--~dg~i~~w~~~  432 (683)
                      ..+.+| ...+..+.++|..+++++++  .|+.+++|...
T Consensus       415 ~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  415 QRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             hhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence            778889 88999999999999999988  68899999754

>KOG0266|consensus

Probab=100.00  E-value=2.4e-34  Score=281.39  Aligned_cols=282  Identities=24%  Similarity=0.398  Sum_probs=252.8

Q ss_pred             CCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCc--ccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeC-CCccc
Q psy15995         44 RGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPA--ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDT-VNKEH  119 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~--~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~-~~~~~  119 (683)
                      ...++++.|||+|++++++ .++.+.+|+..+.+  .++.+.+|...|.+++|+|||+++++++.|++|+|||+ ..+..
T Consensus       159 ~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~  238 (456)
T KOG0266|consen  159 CPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRN  238 (456)
T ss_pred             cCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeE
Confidence            4577889999999999998 68999999998888  77888999999999999999999999999999999999 56688


Q ss_pred             ccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCe
Q psy15995        120 ILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQR  199 (683)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  199 (683)
                      ++.+..|.              ..|.+++|+|+|+++++|+.|++|+|||+.+++++  ..+..|.+.|.+++|++++++
T Consensus       239 ~~~l~gH~--------------~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~--~~l~~hs~~is~~~f~~d~~~  302 (456)
T KOG0266|consen  239 LKTLKGHS--------------TYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECV--RKLKGHSDGISGLAFSPDGNL  302 (456)
T ss_pred             EEEecCCC--------------CceEEEEecCCCCEEEEecCCCcEEEEeccCCeEE--EeeeccCCceEEEEECCCCCE
Confidence            88888887              88999999999999999999999999999998754  566788899999999999999


Q ss_pred             EEEEecCCceEEEEEEccCCC--ceeeeecCCcC--eEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccC-
Q psy15995        200 MVVVGEGRERFGHVFMSETGT--SVGEISGQSKP--INSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF-  274 (683)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-  274 (683)
                      +++++.  +..+.+|+..++.  ....+.++...  ++++.|+|++.+ +++++.|+.+++||+..++......+|... 
T Consensus       303 l~s~s~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~-ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~  379 (456)
T KOG0266|consen  303 LVSASY--DGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKY-LLSASLDRTLKLWDLRSGKSVGTYTGHSNLV  379 (456)
T ss_pred             EEEcCC--CccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcE-EEEecCCCeEEEEEccCCcceeeecccCCcc
Confidence            999965  4558999999998  56777777666  999999999997 999999999999999999999999998875 


Q ss_pred             --eEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCcc-ccCeEEEEEccCCCEEEEEE--CCCcEEEEECC
Q psy15995        275 --VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAH-KGGVYAVAWKPDGTQLLTAS--GDKTCKLWDIE  346 (683)
Q Consensus       275 --v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~--~dg~i~iwd~~  346 (683)
                        +.+...++.++++++|+.|+.|++|+..++..+..+..  | ...+..+.++|..+++++.+  .|+.+++|...
T Consensus       380 ~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~--h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  380 RCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEG--HSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             eeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcC--CCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence              44455678899999999999999999999998888876  8 88999999999999999988  68889999754

>KOG0282|consensus

Probab=100.00  E-value=2.6e-35  Score=260.98  Aligned_cols=293  Identities=23%  Similarity=0.370  Sum_probs=248.9

Q ss_pred             CCceeeeccccccCeEEEEECC-CCCEEEEEcCCCcEEEEeCCC-CeeEEeccCCccccCeEEEEEccCCCEEEEEECCC
Q psy15995        261 PFKFKMTKQEHSRFVQAVRYSP-SGSHFASAGFDGKVFLYDGAS-ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK  338 (683)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  338 (683)
                      ..+.+..+.+|...|+++.|.| .+.+|++++.|+.|+||++.. +.+++++..  |..+|.+++|+++|..+++++.|+
T Consensus       203 Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~g--H~k~Vrd~~~s~~g~~fLS~sfD~  280 (503)
T KOG0282|consen  203 PKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKG--HRKPVRDASFNNCGTSFLSASFDR  280 (503)
T ss_pred             cHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhc--chhhhhhhhccccCCeeeeeecce
Confidence            3456778889999999999999 888999999999999999887 889999976  999999999999999999999999


Q ss_pred             cEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC-CEE
Q psy15995        339 TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR-GTV  417 (683)
Q Consensus       339 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l  417 (683)
                      .+++||+++|+.+..+..                                             ...++|+.|+|++ +.+
T Consensus       281 ~lKlwDtETG~~~~~f~~---------------------------------------------~~~~~cvkf~pd~~n~f  315 (503)
T KOG0282|consen  281 FLKLWDTETGQVLSRFHL---------------------------------------------DKVPTCVKFHPDNQNIF  315 (503)
T ss_pred             eeeeeccccceEEEEEec---------------------------------------------CCCceeeecCCCCCcEE
Confidence            999999999998877632                                             3457899999998 888


Q ss_pred             EEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCe
Q psy15995        418 FTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENT  497 (683)
Q Consensus       418 ~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (683)
                      ++|+.|+.|+.||+++++.++.+. .|-.                                                   
T Consensus       316 l~G~sd~ki~~wDiRs~kvvqeYd-~hLg---------------------------------------------------  343 (503)
T KOG0282|consen  316 LVGGSDKKIRQWDIRSGKVVQEYD-RHLG---------------------------------------------------  343 (503)
T ss_pred             EEecCCCcEEEEeccchHHHHHHH-hhhh---------------------------------------------------
Confidence            999999999999999999777663 2222                                                   


Q ss_pred             EEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCC
Q psy15995        498 LVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNE  577 (683)
Q Consensus       498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~  577 (683)
                                               .+..+.|-++++.+++.++|+.++||+......+........-...++..+|+++
T Consensus       344 -------------------------~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~  398 (503)
T KOG0282|consen  344 -------------------------AILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGK  398 (503)
T ss_pred             -------------------------heeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCC
Confidence                                     3466778888899999999999999998887766555544555677899999999


Q ss_pred             EEEEEeCCCeEEEEECCC-Cccccccceeeec--ccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCC
Q psy15995        578 YLVASDAHRKVVLYRVPD-FELAHNKEWGFHS--AKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQ  654 (683)
Q Consensus       578 ~l~~~~~d~~i~i~~~~~-~~~~~~~~~~~h~--~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  654 (683)
                      ++++-+.|+.+.+|.+.. .++-....+.+|.  +--..+.|||||++|++|+.||.+.+||..+-+....++.  |...
T Consensus       399 ~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lka--h~~~  476 (503)
T KOG0282|consen  399 WFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKA--HDQP  476 (503)
T ss_pred             eehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhcccc--CCcc
Confidence            999999999999999753 2333334455565  4466788999999999999999999999999888888876  7899


Q ss_pred             eeEEEEcc--CCeEEEeeCCCcEEEEe
Q psy15995        655 ITRLQWLD--NDLLVSVGQDCNTKIWE  679 (683)
Q Consensus       655 v~~l~~~~--~~~l~s~~~d~~v~vw~  679 (683)
                      +..+.|.|  ...++|+|.||.|++|+
T Consensus       477 ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  477 CIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             eEEEEecCCCcceeEecccCceeEecC
Confidence            99999994  45999999999999996

>KOG0643|consensus

Probab=100.00  E-value=4.9e-34  Score=233.02  Aligned_cols=301  Identities=17%  Similarity=0.275  Sum_probs=252.8

Q ss_pred             cccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEee
Q psy15995         80 IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASG  159 (683)
Q Consensus        80 ~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  159 (683)
                      .++||+.+++.+.|+.+|.+|.+++.|.+..||--.+|+.+-++.+|.              ..|.++.+..+.+++++|
T Consensus         5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHt--------------GavW~~Did~~s~~liTG   70 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHT--------------GAVWCCDIDWDSKHLITG   70 (327)
T ss_pred             ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCC--------------ceEEEEEecCCcceeeec
Confidence            378999999999999999999999999999999999999999999997              889999999999999999


Q ss_pred             cCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCC---ceEEEEEEcc-------CCCceeeeecCC
Q psy15995        160 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR---ERFGHVFMSE-------TGTSVGEISGQS  229 (683)
Q Consensus       160 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~---~~~~~~~~~~-------~~~~~~~~~~~~  229 (683)
                      +.|.++++||+++|+.+......   .+|..+.|+++|++++++.+..   ...+.+++..       ..++...+..+.
T Consensus        71 SAD~t~kLWDv~tGk~la~~k~~---~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~  147 (327)
T KOG0643|consen   71 SADQTAKLWDVETGKQLATWKTN---SPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPD  147 (327)
T ss_pred             cccceeEEEEcCCCcEEEEeecC---CeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCc
Confidence            99999999999999988776655   7899999999999998887543   3456677665       455688888899


Q ss_pred             cCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC-ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy15995        230 KPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF-KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVS  308 (683)
Q Consensus       230 ~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~  308 (683)
                      ..++..-|.|-+++ |++|.+||.|.+||.+++ +.+...+.|...|+.+.+++|..++++++.|.+-++||..+.+.++
T Consensus       148 skit~a~Wg~l~~~-ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~K  226 (327)
T KOG0643|consen  148 SKITSALWGPLGET-IIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLK  226 (327)
T ss_pred             cceeeeeecccCCE-EEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEE
Confidence            99999999999996 999999999999999997 4556668899999999999999999999999999999999999999


Q ss_pred             eccCCccccCeEEEEEccCCCEEEEEECCCcEEEE--ECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEE
Q psy15995        309 ELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLW--DIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYL  386 (683)
Q Consensus       309 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~  386 (683)
                      ++.   ...++.+.+++|....++.++.....-+=  +.+.++-.                               -++|
T Consensus       227 ty~---te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFE-------------------------------ArFy  272 (327)
T KOG0643|consen  227 TYT---TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFE-------------------------------ARFY  272 (327)
T ss_pred             Eee---ecccccceecccccceEEecCCceeeeeeeecccccchh-------------------------------hhHH
Confidence            987   67899999999987777777643221111  11111110                               1122


Q ss_pred             ecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCC
Q psy15995        387 DVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~  433 (683)
                      ++-. .+.+..+++|-++|++++|+|+|+..++|++||.|++.....
T Consensus       273 h~i~-eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~  318 (327)
T KOG0643|consen  273 HLIF-EEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDS  318 (327)
T ss_pred             HHHH-HHHhccccccccCcceeEECCCCcccccCCCCceEEEEEecc
Confidence            2211 344567889999999999999999999999999999986554

>KOG0281|consensus

Probab=100.00  E-value=2.7e-35  Score=249.50  Aligned_cols=281  Identities=21%  Similarity=0.330  Sum_probs=234.5

Q ss_pred             cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee
Q psy15995        227 GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL  306 (683)
Q Consensus       227 ~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~  306 (683)
                      ...+.|.|+.+..+   .+++|..|++|++||..+..+...+.+|++.|.|+.|..  +.+++|+.|.+|++||.+++++
T Consensus       195 e~skgVYClQYDD~---kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~--rviisGSSDsTvrvWDv~tge~  269 (499)
T KOG0281|consen  195 ENSKGVYCLQYDDE---KIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE--RVIVSGSSDSTVRVWDVNTGEP  269 (499)
T ss_pred             ccCCceEEEEecch---hhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccc--eEEEecCCCceEEEEeccCCch
Confidence            35677999998766   499999999999999999999999999999999998854  5899999999999999999999


Q ss_pred             EEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEE
Q psy15995        307 VSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYL  386 (683)
Q Consensus       307 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~  386 (683)
                      +..+..  |...|..+.|+  +.++++++.|.++.+||+.....                                    
T Consensus       270 l~tlih--HceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~------------------------------------  309 (499)
T KOG0281|consen  270 LNTLIH--HCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTD------------------------------------  309 (499)
T ss_pred             hhHHhh--hcceeEEEEEe--CCEEEEecCCceeEEEeccCchH------------------------------------
Confidence            999976  99999999998  56899999999999999986543                                    


Q ss_pred             ecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCe
Q psy15995        387 DVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDT  466 (683)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~  466 (683)
                           ....+.+.+|...|+.+.|+  .+++++++.|.+|++|++.+++.++.. .+|...|.++.+.            
T Consensus       310 -----it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl-~gHkRGIAClQYr------------  369 (499)
T KOG0281|consen  310 -----ITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACLQYR------------  369 (499)
T ss_pred             -----HHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhh-hcccccceehhcc------------
Confidence                 22345678999999999985  469999999999999999999998887 5677666655443            


Q ss_pred             EEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEE
Q psy15995        467 IKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVH  546 (683)
Q Consensus       467 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~  546 (683)
                                                                                        ++++++|++|.+|+
T Consensus       370 ------------------------------------------------------------------~rlvVSGSSDntIR  383 (499)
T KOG0281|consen  370 ------------------------------------------------------------------DRLVVSGSSDNTIR  383 (499)
T ss_pred             ------------------------------------------------------------------CeEEEecCCCceEE
Confidence                                                                              55667777777777


Q ss_pred             EEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccc-------cccceeeecccEEEEEecCC
Q psy15995        547 IYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELA-------HNKEWGFHSAKVNCVAWSPD  619 (683)
Q Consensus       547 i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-------~~~~~~~h~~~v~~~~~s~d  619 (683)
                      +||++.+..+ +...+|+.-|.++.|  |.+.+++|+.||+|++||+.++.-.       .......|++.|-.+.|  |
T Consensus       384 lwdi~~G~cL-RvLeGHEeLvRciRF--d~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D  458 (499)
T KOG0281|consen  384 LWDIECGACL-RVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--D  458 (499)
T ss_pred             EEeccccHHH-HHHhchHHhhhheee--cCceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--c
Confidence            7777777766 344479999999999  6789999999999999999875432       11222238999999999  6


Q ss_pred             CCeEEEeecCCcEEEEeCCCCcee
Q psy15995        620 SALVASGSLDTTIIIWSLASPAKH  643 (683)
Q Consensus       620 ~~~l~~~~~d~~v~iw~~~~~~~~  643 (683)
                      ...+++.+.|.+|.|||+.++...
T Consensus       459 ~fqIvsssHddtILiWdFl~~~~~  482 (499)
T KOG0281|consen  459 EFQIISSSHDDTILIWDFLNGPPS  482 (499)
T ss_pred             ceEEEeccCCCeEEEEEcCCCCcc
Confidence            788999999999999999877654

>KOG0275|consensus

Probab=100.00  E-value=6.2e-35  Score=245.06  Aligned_cols=294  Identities=19%  Similarity=0.350  Sum_probs=251.1

Q ss_pred             CcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC
Q psy15995         83 EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS  162 (683)
Q Consensus        83 ~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  162 (683)
                      |.+.-+.|..|||||+||++|+.||-|.+||..+|+....++.....      .......+|.|+.||.|...||+|+.|
T Consensus       211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd------~fMMmd~aVlci~FSRDsEMlAsGsqD  284 (508)
T KOG0275|consen  211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQD------NFMMMDDAVLCISFSRDSEMLASGSQD  284 (508)
T ss_pred             ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhc------ceeecccceEEEeecccHHHhhccCcC
Confidence            56677899999999999999999999999999999887777665422      223344789999999999999999999


Q ss_pred             ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCC
Q psy15995        163 GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRP  242 (683)
Q Consensus       163 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  242 (683)
                      |.|++|.+.+|.++.++. .+                                            |...|+++.|+.++.
T Consensus       285 GkIKvWri~tG~ClRrFd-rA--------------------------------------------HtkGvt~l~FSrD~S  319 (508)
T KOG0275|consen  285 GKIKVWRIETGQCLRRFD-RA--------------------------------------------HTKGVTCLSFSRDNS  319 (508)
T ss_pred             CcEEEEEEecchHHHHhh-hh--------------------------------------------hccCeeEEEEccCcc
Confidence            999999999998775443 13                                            344455555555554


Q ss_pred             eEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEE
Q psy15995        243 FRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAV  322 (683)
Q Consensus       243 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~  322 (683)
                       .+++++.|.++++.-+..++++..+++|+..|+...|.++|..+++++.||+|++|+.++.+++.++...+...+|..+
T Consensus       320 -qiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv  398 (508)
T KOG0275|consen  320 -QILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSV  398 (508)
T ss_pred             -hhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeE
Confidence             3888899999999999999999999999999999999999999999999999999999999999999987788899999


Q ss_pred             EEcc-CCCEEEEEECCCcEEEEECCCCceeeEEEecCcc--eeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeee
Q psy15995        323 AWKP-DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQV--EDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIK  399 (683)
Q Consensus       323 ~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~  399 (683)
                      -..| +...+++|...+++.+.++. |+.++.+..+...  .......+|.|+++.+.++|+.++.|.... +...+++.
T Consensus       399 ~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~s-G~LE~tl~  476 (508)
T KOG0275|consen  399 ILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLS-GKLERTLP  476 (508)
T ss_pred             EEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeec-Cceeeeee
Confidence            8888 55688999999999999987 7788888766543  334556678999999999999999999988 55567788


Q ss_pred             eccccEEEEEEeCCCCEEEEEeCCCcEEEEc
Q psy15995        400 GHNKPITALALSPDRGTVFTGSHDGFITRWN  430 (683)
Q Consensus       400 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~  430 (683)
                      -|...+..++-+|..+.+++=++||.+++|.
T Consensus       477 VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  477 VHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             cccccccccccCcccchhhhhcccchhhhcC
Confidence            8999999999999999999999999999995

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=7.7e-33  Score=262.43  Aligned_cols=282  Identities=23%  Similarity=0.401  Sum_probs=250.0

Q ss_pred             ccCCCeEEEeeCCCCCeEEEec-CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccc
Q psy15995         42 TQRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHI  120 (683)
Q Consensus        42 ~~~~~~~~~~~s~~~~~l~~~~-~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~  120 (683)
                      .+++.+.+++++|++++|+++. ++.|.+|++.+++....+.+|...+.++.|+|++++|++++.||.|++||+.+++.+
T Consensus         7 ~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~   86 (289)
T cd00200           7 GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECV   86 (289)
T ss_pred             ccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccce
Confidence            4567899999999999999885 899999999999888889999999999999999999999999999999999987666


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeE
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRM  200 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  200 (683)
                      ..+..+.              ..+.++.|+++++++++++.++.+.+||+.+++....  +..+...+.+++|+|+++++
T Consensus        87 ~~~~~~~--------------~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l  150 (289)
T cd00200          87 RTLTGHT--------------SYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTT--LRGHTDWVNSVAFSPDGTFV  150 (289)
T ss_pred             EEEeccC--------------CcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEE--eccCCCcEEEEEEcCcCCEE
Confidence            6655443              5789999999999999999999999999997765443  34667889999999998888


Q ss_pred             EEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEE
Q psy15995        201 VVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRY  280 (683)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~  280 (683)
                      +++..++  .+.+|+.+.++....+..|...+.++.|+|+++. +++++.++.+++||...++....+..|...+.++.|
T Consensus       151 ~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~  227 (289)
T cd00200         151 ASSSQDG--TIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEK-LLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAF  227 (289)
T ss_pred             EEEcCCC--cEEEEEccccccceeEecCccccceEEECCCcCE-EEEecCCCcEEEEECCCCceecchhhcCCceEEEEE
Confidence            8776333  3788998888989999999999999999999985 888888999999999999888888889999999999


Q ss_pred             CCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEE
Q psy15995        281 SPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWD  344 (683)
Q Consensus       281 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  344 (683)
                      +|++.++++++.+|.|++|++.+++....+..  |...+.+++|+|+++.+++++.|+.+++|+
T Consensus       228 ~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         228 SPDGYLLASGSEDGTIRVWDLRTGECVQTLSG--HTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             cCCCcEEEEEcCCCcEEEEEcCCceeEEEccc--cCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            99988888888899999999999888888864  888999999999999999999999999996

>KOG0278|consensus

Probab=100.00  E-value=2.1e-34  Score=232.71  Aligned_cols=291  Identities=25%  Similarity=0.380  Sum_probs=257.9

Q ss_pred             eeeccccccCeEEEEECC---CCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEE
Q psy15995        265 KMTKQEHSRFVQAVRYSP---SGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCK  341 (683)
Q Consensus       265 ~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  341 (683)
                      .....+|..+|..++|+|   +|-+|++++.||.-.+-+-++|..+.++..  |++.|.+..+..+....++++.|-+-+
T Consensus         7 pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeg--hkgavw~~~l~~na~~aasaaadftak   84 (334)
T KOG0278|consen    7 PLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEG--HKGAVWSATLNKNATRAASAAADFTAK   84 (334)
T ss_pred             ceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeec--cCcceeeeecCchhhhhhhhcccchhh
Confidence            345678999999999986   788999999999999999999999999976  999999999999888899999999999


Q ss_pred             EEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEe
Q psy15995        342 LWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS  421 (683)
Q Consensus       342 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  421 (683)
                      +||.-++..+..+                                             .|..-|.+++|+.|.++|++|+
T Consensus        85 vw~a~tgdelhsf---------------------------------------------~hkhivk~~af~~ds~~lltgg  119 (334)
T KOG0278|consen   85 VWDAVTGDELHSF---------------------------------------------EHKHIVKAVAFSQDSNYLLTGG  119 (334)
T ss_pred             hhhhhhhhhhhhh---------------------------------------------hhhheeeeEEecccchhhhccc
Confidence            9999998876654                                             2677799999999999999999


Q ss_pred             CCCcEEEEcCCCCCcceeccCCCCcceeEEEEe--CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEE
Q psy15995        422 HDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLV  499 (683)
Q Consensus       422 ~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (683)
                      .+..+++||++..+.......+|...|..+.|.  .+.++++..|++||+||.+++                        
T Consensus       120 ~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTg------------------------  175 (334)
T KOG0278|consen  120 QEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTG------------------------  175 (334)
T ss_pred             hHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccC------------------------
Confidence            999999999998887777778999999999998  778888899999999999875                        


Q ss_pred             EEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEE
Q psy15995        500 TVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYL  579 (683)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  579 (683)
                                   ..+..+..+.+++++.++++|++|.++.. +.|.+||..+..++....  ....|.+..++|+...+
T Consensus       176 -------------t~v~sL~~~s~VtSlEvs~dG~ilTia~g-ssV~Fwdaksf~~lKs~k--~P~nV~SASL~P~k~~f  239 (334)
T KOG0278|consen  176 -------------TEVQSLEFNSPVTSLEVSQDGRILTIAYG-SSVKFWDAKSFGLLKSYK--MPCNVESASLHPKKEFF  239 (334)
T ss_pred             -------------cEEEEEecCCCCcceeeccCCCEEEEecC-ceeEEeccccccceeecc--CccccccccccCCCceE
Confidence                         56777888889999999999998877644 679999999988775555  44678999999999999


Q ss_pred             EEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCcee
Q psy15995        580 VASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKH  643 (683)
Q Consensus       580 ~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~  643 (683)
                      ++|++|..++.||..+++.+... ..+|.++|.|+.|+|||..-|+|++||+|++|....++..
T Consensus       240 VaGged~~~~kfDy~TgeEi~~~-nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~  302 (334)
T KOG0278|consen  240 VAGGEDFKVYKFDYNTGEEIGSY-NKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY  302 (334)
T ss_pred             EecCcceEEEEEeccCCceeeec-ccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence            99999999999999999887653 2459999999999999999999999999999998766544

>KOG0316|consensus

Probab=100.00  E-value=6.7e-33  Score=222.01  Aligned_cols=286  Identities=16%  Similarity=0.263  Sum_probs=244.0

Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEe
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD  300 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  300 (683)
                      ....+..+.++|..+.|+-+|+| .++++.|.+|++|+...+.+++++.+|..+|..++.+.|...+++++.|..+.+||
T Consensus         9 r~~~l~~~qgaV~avryN~dGnY-~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwD   87 (307)
T KOG0316|consen    9 RLSILDCAQGAVRAVRYNVDGNY-CLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWD   87 (307)
T ss_pred             hceeecccccceEEEEEccCCCE-EEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEE
Confidence            45667889999999999999997 88999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecC
Q psy15995        301 GASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS  380 (683)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  380 (683)
                      +++|+..+.+..  |.+.|..+.|+.+...+++++.|..+++||.++..                               
T Consensus        88 V~TGkv~Rr~rg--H~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s-------------------------------  134 (307)
T KOG0316|consen   88 VNTGKVDRRFRG--HLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRS-------------------------------  134 (307)
T ss_pred             cccCeeeeeccc--ccceeeEEEecCcceEEEeccccceeEEEEcccCC-------------------------------
Confidence            999999999987  99999999999999999999999999999998764                               


Q ss_pred             CcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEE
Q psy15995        381 GFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYT  460 (683)
Q Consensus       381 g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  460 (683)
                                 .+|++.+......|.++..+  +..+++|+.||+++.||++.+....-.                    
T Consensus       135 -----------~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~sDy--------------------  181 (307)
T KOG0316|consen  135 -----------FEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSSDY--------------------  181 (307)
T ss_pred             -----------CCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEeecceeehhh--------------------
Confidence                       34556666677888888875  467899999999999999887654332                    


Q ss_pred             EEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEc
Q psy15995        461 CGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGG  540 (683)
Q Consensus       461 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  540 (683)
                                                                                 ...++++++++++++..++++
T Consensus       182 -----------------------------------------------------------~g~pit~vs~s~d~nc~La~~  202 (307)
T KOG0316|consen  182 -----------------------------------------------------------FGHPITSVSFSKDGNCSLASS  202 (307)
T ss_pred             -----------------------------------------------------------cCCcceeEEecCCCCEEEEee
Confidence                                                                       123689999999999999999


Q ss_pred             CCCcEEEEEcCCCccCcceeecCCc--CeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeeccc-EEEEEec
Q psy15995        541 ADSKVHIYELNNKSLSPKAELDHLG--PVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAK-VNCVAWS  617 (683)
Q Consensus       541 ~dg~i~i~d~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~-v~~~~~s  617 (683)
                      .|+++++.|-++++++.... +|..  .-..++++.....+++|++||.|++||+.+...+.....  |... |.++.+.
T Consensus       203 l~stlrLlDk~tGklL~sYk-Ghkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~--~~~v~v~dl~~h  279 (307)
T KOG0316|consen  203 LDSTLRLLDKETGKLLKSYK-GHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSV--VSTVIVTDLSCH  279 (307)
T ss_pred             ccceeeecccchhHHHHHhc-ccccceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeecc--CCceeEEeeecc
Confidence            99999999999999875444 4433  345677888889999999999999999999888766554  5555 7999999


Q ss_pred             CCCCeEEEeecCCcEEEEe
Q psy15995        618 PDSALVASGSLDTTIIIWS  636 (683)
Q Consensus       618 ~d~~~l~~~~~d~~v~iw~  636 (683)
                      |.-.-++++.. +.+..|.
T Consensus       280 p~~~~f~~A~~-~~~~~~~  297 (307)
T KOG0316|consen  280 PTMDDFITATG-HGDLFWY  297 (307)
T ss_pred             cCccceeEecC-Cceecee
Confidence            98766777663 3455664

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=2.4e-32  Score=289.29  Aligned_cols=304  Identities=21%  Similarity=0.327  Sum_probs=236.8

Q ss_pred             CCeEEEEcCCCCceeee-----ccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCe--------eEEeccCCcccc
Q psy15995        251 DNTIAVFEGPPFKFKMT-----KQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASAD--------LVSELGNPAHKG  317 (683)
Q Consensus       251 d~~i~iw~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--------~~~~~~~~~~~~  317 (683)
                      +|.+++|+....+....     +..|...|.+++|+|+++++++|+.|+.|++|+.....        ....+.   +..
T Consensus       457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~---~~~  533 (793)
T PLN00181        457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA---SRS  533 (793)
T ss_pred             hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec---ccC
Confidence            56788888776655433     34589999999999999999999999999999975421        111221   456


Q ss_pred             CeEEEEEcc-CCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCccee
Q psy15995        318 GVYAVAWKP-DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIR  396 (683)
Q Consensus       318 ~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~  396 (683)
                      .+.+++|++ ++.+|++++.||.|++||+.+++.+.                                            
T Consensus       534 ~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~--------------------------------------------  569 (793)
T PLN00181        534 KLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVT--------------------------------------------  569 (793)
T ss_pred             ceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEE--------------------------------------------
Confidence            789999987 47889999999999999998765433                                            


Q ss_pred             eeeeccccEEEEEEeC-CCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCC
Q psy15995        397 VIKGHNKPITALALSP-DRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSN  475 (683)
Q Consensus       397 ~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~  475 (683)
                      .+.+|...|++++|+| ++.+|++|+.|+.|++||+.++.......                                  
T Consensus       570 ~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~----------------------------------  615 (793)
T PLN00181        570 EMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK----------------------------------  615 (793)
T ss_pred             EecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEe----------------------------------
Confidence            3467899999999997 78999999999999999998765433221                                  


Q ss_pred             cccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEE-ccCCCEEEEEcCCCcEEEEEcCCCc
Q psy15995        476 AYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISL-DHEHGLVAVGGADSKVHIYELNNKS  554 (683)
Q Consensus       476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~dg~i~i~d~~~~~  554 (683)
                                                                  ....+.++.+ ++++.++++|+.||.|++||+.+..
T Consensus       616 --------------------------------------------~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~  651 (793)
T PLN00181        616 --------------------------------------------TKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPK  651 (793)
T ss_pred             --------------------------------------------cCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence                                                        0113456666 4568899999999999999998765


Q ss_pred             cCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCc----cccccceeeecccEEEEEecCCCCeEEEeecCC
Q psy15995        555 LSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFE----LAHNKEWGFHSAKVNCVAWSPDSALVASGSLDT  630 (683)
Q Consensus       555 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~----~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~  630 (683)
                      .......+|...|.++.|. ++.+|++++.|++|++||+..+.    ......+.+|...+++++|+|++++||+|+.|+
T Consensus       652 ~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~  730 (793)
T PLN00181        652 LPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETN  730 (793)
T ss_pred             ccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence            4333445688999999997 78899999999999999997532    111234455999999999999999999999999


Q ss_pred             cEEEEeCCCCceeeEee-----------cCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEee
Q psy15995        631 TIIIWSLASPAKHIIIK-----------NAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       631 ~v~iw~~~~~~~~~~~~-----------~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~  680 (683)
                      .|++|+...+.......           ..+|...|.+++|+ ++..|++++.||.|++|++
T Consensus       731 ~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        731 EVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             EEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence            99999987665432221           12345679999999 7789999999999999986

>KOG0313|consensus

Probab=100.00  E-value=2.2e-33  Score=240.89  Aligned_cols=310  Identities=23%  Similarity=0.319  Sum_probs=232.4

Q ss_pred             ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCC---EEEEEcCCCcEEEEeCC
Q psy15995        226 SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGS---HFASAGFDGKVFLYDGA  302 (683)
Q Consensus       226 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~dg~i~iw~~~  302 (683)
                      ..|.+.|.++...  ++ .+++|+.||.+++|| ..|+....+.+|.++|.+++|.-...   .|++++.|.++++|..+
T Consensus       102 ~~hdDWVSsv~~~--~~-~IltgsYDg~~riWd-~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~  177 (423)
T KOG0313|consen  102 FLHDDWVSSVKGA--SK-WILTGSYDGTSRIWD-LKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWN  177 (423)
T ss_pred             ccchhhhhhhccc--Cc-eEEEeecCCeeEEEe-cCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEec
Confidence            3578888888887  33 499999999999999 57888999999999999888765433   59999999999999988


Q ss_pred             CCeeEEeccC--CccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecC
Q psy15995        303 SADLVSELGN--PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS  380 (683)
Q Consensus       303 ~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  380 (683)
                      .++.......  .+|...|.++...+++.++++++.|..|++|+.++. ...++.........                 
T Consensus       178 ~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~-~~~~~E~~s~~rrk-----------------  239 (423)
T KOG0313|consen  178 VGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETD-EEDELESSSNRRRK-----------------  239 (423)
T ss_pred             CchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCC-ccccccccchhhhh-----------------
Confidence            7765433322  269999999999999999999999999999993321 11111111000000                 


Q ss_pred             CcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEE
Q psy15995        381 GFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYT  460 (683)
Q Consensus       381 g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  460 (683)
                       .-+.-.......|+..+.+|..+|.++.|++ ...+++++.|.+|+.||+.++.......                   
T Consensus       240 -~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~-------------------  298 (423)
T KOG0313|consen  240 -KQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLT-------------------  298 (423)
T ss_pred             -hhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeee-------------------
Confidence             0000000111457788999999999999988 6788899999999999988765433221                   


Q ss_pred             EEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEc
Q psy15995        461 CGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGG  540 (683)
Q Consensus       461 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  540 (683)
                                                                                                      
T Consensus       299 --------------------------------------------------------------------------------  298 (423)
T KOG0313|consen  299 --------------------------------------------------------------------------------  298 (423)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCC--ccccccceeeecccEEEEEecC
Q psy15995        541 ADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDF--ELAHNKEWGFHSAKVNCVAWSP  618 (683)
Q Consensus       541 ~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~h~~~v~~~~~s~  618 (683)
                                            ......++..+|..++|++|+.|..+++||..++  ... ...+.+|.+.|.++.|+|
T Consensus       299 ----------------------~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v-~~s~~gH~nwVssvkwsp  355 (423)
T KOG0313|consen  299 ----------------------TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVV-SQSLIGHKNWVSSVKWSP  355 (423)
T ss_pred             ----------------------cCcceeEeecccccceeeecCCCCceeecCCCCCCCcee-EEeeecchhhhhheecCC
Confidence                                  1233556666666777777777777777776643  232 344555999999999999


Q ss_pred             C-CCeEEEeecCCcEEEEeCCCCc-eeeEeecCCCCCCeeEEEEccCCeEEEeeCCCcEEEEeeccC
Q psy15995        619 D-SALVASGSLDTTIIIWSLASPA-KHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIAPF  683 (683)
Q Consensus       619 d-~~~l~~~~~d~~v~iw~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~v~vw~~~~~  683 (683)
                      . ..+|++|+.|+++++||+++.. ++..+..  |.+.|.++.|.++..+++||.|+.|+++.-.++
T Consensus       356 ~~~~~~~S~S~D~t~klWDvRS~k~plydI~~--h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~~~  420 (423)
T KOG0313|consen  356 TNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAG--HNDKVLSVDWNEGGLIVSGGADNKLRIFKGSPI  420 (423)
T ss_pred             CCceEEEEEecCCeEEEEEeccCCCcceeecc--CCceEEEEeccCCceEEeccCcceEEEeccccc
Confidence            5 4678899999999999999988 6666655  799999999999999999999999999986653

>KOG0278|consensus

Probab=100.00  E-value=6e-34  Score=230.07  Aligned_cols=290  Identities=21%  Similarity=0.322  Sum_probs=255.2

Q ss_pred             eeecCCcCeEEEEeecC--CCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeC
Q psy15995        224 EISGQSKPINSCDFKPS--RPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDG  301 (683)
Q Consensus       224 ~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  301 (683)
                      ...+|..+|..++|+|-  ..+.|++++.|+.-.+-+-+++..+-++.+|.+.|++..++.+....|+++.|=+-++||.
T Consensus         9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a   88 (334)
T KOG0278|consen    9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDA   88 (334)
T ss_pred             EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhh
Confidence            45689999999999873  2346999999999999999999999999999999999999999988999999999999999


Q ss_pred             CCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCC
Q psy15995        302 ASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSG  381 (683)
Q Consensus       302 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g  381 (683)
                      -+|..+..+.   |+.-|.+++|+.|.++|++|+.+..++++|++..+                                
T Consensus        89 ~tgdelhsf~---hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~--------------------------------  133 (334)
T KOG0278|consen   89 VTGDELHSFE---HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK--------------------------------  133 (334)
T ss_pred             hhhhhhhhhh---hhheeeeEEecccchhhhccchHHHhhhhhccCCC--------------------------------
Confidence            9999999987   88999999999999999999999999999987543                                


Q ss_pred             cEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe-CCeEEE
Q psy15995        382 FISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT-GELLYT  460 (683)
Q Consensus       382 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~  460 (683)
                                 .+...+.+|.+.|..+.|....+.+++.+.|++|++||.+++.....+.  ....|+++... ...+++
T Consensus       134 -----------App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~--~~s~VtSlEvs~dG~ilT  200 (334)
T KOG0278|consen  134 -----------APPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE--FNSPVTSLEVSQDGRILT  200 (334)
T ss_pred             -----------CCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe--cCCCCcceeeccCCCEEE
Confidence                       3345678899999999999999999999999999999999999888775  55678888877 667778


Q ss_pred             EEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEc
Q psy15995        461 CGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGG  540 (683)
Q Consensus       461 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  540 (683)
                      ....+.|.+||..+...                                     +.....+..+.+.+++|+...+++|+
T Consensus       201 ia~gssV~Fwdaksf~~-------------------------------------lKs~k~P~nV~SASL~P~k~~fVaGg  243 (334)
T KOG0278|consen  201 IAYGSSVKFWDAKSFGL-------------------------------------LKSYKMPCNVESASLHPKKEFFVAGG  243 (334)
T ss_pred             EecCceeEEeccccccc-------------------------------------eeeccCccccccccccCCCceEEecC
Confidence            88889999999887532                                     33444566788999999999999999


Q ss_pred             CCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCcc
Q psy15995        541 ADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFEL  598 (683)
Q Consensus       541 ~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~  598 (683)
                      +|..++.||+.++..+.....+|.++|.|+.|+|||...++|++||+|++|.+.-++.
T Consensus       244 ed~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~  301 (334)
T KOG0278|consen  244 EDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKT  301 (334)
T ss_pred             cceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCc
Confidence            9999999999999887665568999999999999999999999999999999876554

>KOG0281|consensus

Probab=100.00  E-value=3.7e-34  Score=242.64  Aligned_cols=275  Identities=16%  Similarity=0.279  Sum_probs=225.8

Q ss_pred             eeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceec
Q psy15995        361 EDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       361 ~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~  440 (683)
                      .....+...+++.+++|..|++|++||... ....+.+.+|.+.|.|+.|.  .+.+++|+.|.+|++||.++++++..+
T Consensus       197 skgVYClQYDD~kiVSGlrDnTikiWD~n~-~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tl  273 (499)
T KOG0281|consen  197 SKGVYCLQYDDEKIVSGLRDNTIKIWDKNS-LECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTL  273 (499)
T ss_pred             CCceEEEEecchhhhcccccCceEEecccc-HHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHH
Confidence            334455566889999999999999999987 56677889999999999985  569999999999999999999999887


Q ss_pred             cCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecC
Q psy15995        441 GAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPI  520 (683)
Q Consensus       441 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  520 (683)
                       ..|...|..+.++++++++++.|.++.+||+.+.........+                                 ..+
T Consensus       274 -ihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVL---------------------------------vGH  319 (499)
T KOG0281|consen  274 -IHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVL---------------------------------VGH  319 (499)
T ss_pred             -hhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHH---------------------------------hhh
Confidence             6799999999999999999999999999999875321110000                                 012


Q ss_pred             CCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCcccc
Q psy15995        521 DYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAH  600 (683)
Q Consensus       521 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~  600 (683)
                      ...+..+.|+  .+++++++.|.+|++|++.+.+.+. ...+|...|.|+.+  .++++++|+.|.+|++||+..|.++.
T Consensus       320 rAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvR-tl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLR  394 (499)
T KOG0281|consen  320 RAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVR-TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLR  394 (499)
T ss_pred             hhheeeeccc--cceEEEecCCceEEEEeccceeeeh-hhhcccccceehhc--cCeEEEecCCCceEEEEeccccHHHH
Confidence            2344555554  5699999999999999999999884 44468888988887  68999999999999999999999986


Q ss_pred             ccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCcee-------eEeecCCCCCCeeEEEEccCCeEEEeeCCC
Q psy15995        601 NKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKH-------IIIKNAHPQSQITRLQWLDNDLLVSVGQDC  673 (683)
Q Consensus       601 ~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~-------~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~  673 (683)
                      ..+  ||..-|.++.|  |.+.+++|+.||+|++||+..+...       +......|++.|..+.|. .-.+++++.|.
T Consensus       395 vLe--GHEeLvRciRF--d~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD-~fqIvsssHdd  469 (499)
T KOG0281|consen  395 VLE--GHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIISSSHDD  469 (499)
T ss_pred             HHh--chHHhhhheee--cCceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeec-ceEEEeccCCC
Confidence            554  49999999999  6789999999999999999887654       222234478899999975 44788999999


Q ss_pred             cEEEEeecc
Q psy15995        674 NTKIWEIAP  682 (683)
Q Consensus       674 ~v~vw~~~~  682 (683)
                      +|.+||..+
T Consensus       470 tILiWdFl~  478 (499)
T KOG0281|consen  470 TILIWDFLN  478 (499)
T ss_pred             eEEEEEcCC
Confidence            999999875

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=4.3e-32  Score=287.43  Aligned_cols=322  Identities=16%  Similarity=0.181  Sum_probs=247.4

Q ss_pred             CCeEEEEeCCCCccccc-----ccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceee
Q psy15995         64 GNSVIIRNIENPAISDI-----YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTL  138 (683)
Q Consensus        64 ~~~i~v~~~~~~~~~~~-----~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  138 (683)
                      +|.+.+|+..+.+....     +..|...|.+++|+|+|++||+|+.|+.|+|||+........ ..+      ......
T Consensus       457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~-~~~------~~~~~~  529 (793)
T PLN00181        457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGR-DIH------YPVVEL  529 (793)
T ss_pred             hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCccccccc-ccc------cceEEe
Confidence            45677777776544322     445999999999999999999999999999999864211000 000      001112


Q ss_pred             eeecceeeeEeec-cceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcC-CCCeEEEEecCCceEEEEEEc
Q psy15995        139 LSLTSIRNILVLS-IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSP-DNQRMVVVGEGRERFGHVFMS  216 (683)
Q Consensus       139 ~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~~~~~~~~~~~~  216 (683)
                      .....+.+++|++ ++.+||+++.||+|++||+.+++.+  ..+..|.+.|.+++|+| ++.+|++++.++.  +.+|+.
T Consensus       530 ~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~--~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~--v~iWd~  605 (793)
T PLN00181        530 ASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLV--TEMKEHEKRVWSIDYSSADPTLLASGSDDGS--VKLWSI  605 (793)
T ss_pred             cccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEE--EEecCCCCCEEEEEEcCCCCCEEEEEcCCCE--EEEEEC
Confidence            2235688899987 4789999999999999999987755  34567889999999997 7788888877654  789999


Q ss_pred             cCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc-eeeeccccccCeEEEEECCCCCEEEEEcCCCc
Q psy15995        217 ETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK-FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGK  295 (683)
Q Consensus       217 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  295 (683)
                      .++..+..+..+ ..+.++.|++.....+++|+.||.|++||++..+ ....+.+|...|.++.|. ++..|++++.|+.
T Consensus       606 ~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~  683 (793)
T PLN00181        606 NQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNT  683 (793)
T ss_pred             CCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCE
Confidence            988888888755 6799999966433369999999999999998765 456778899999999997 6789999999999


Q ss_pred             EEEEeCCCC------eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEe
Q psy15995        296 VFLYDGASA------DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW  369 (683)
Q Consensus       296 i~iw~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  369 (683)
                      |++||+..+      ..+..+..  |...+..++|+|++++|++++.|+.+++|+......+..+........       
T Consensus       684 ikiWd~~~~~~~~~~~~l~~~~g--h~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~-------  754 (793)
T PLN00181        684 LKLWDLSMSISGINETPLHSFMG--HTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPV-------  754 (793)
T ss_pred             EEEEeCCCCccccCCcceEEEcC--CCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcc-------
Confidence            999998743      45566654  889999999999999999999999999999876654433321110000       


Q ss_pred             cCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcC
Q psy15995        370 QGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNA  431 (683)
Q Consensus       370 ~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~  431 (683)
                                              .-.....|...|.+++|+|++..|++|+.||.|++|++
T Consensus       755 ------------------------~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        755 ------------------------SGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             ------------------------cccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence                                    00112345678999999999999999999999999986

>KOG0316|consensus

Probab=100.00  E-value=8.2e-33  Score=221.48  Aligned_cols=281  Identities=16%  Similarity=0.224  Sum_probs=247.3

Q ss_pred             cccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEE
Q psy15995         78 SDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIA  157 (683)
Q Consensus        78 ~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  157 (683)
                      .+.+..|.++|.++.|+-||+|.++++.|.+|++|+...+.++.++..|.              ..|..++.+.|...++
T Consensus        10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG--------------~EVlD~~~s~Dnskf~   75 (307)
T KOG0316|consen   10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHG--------------HEVLDAALSSDNSKFA   75 (307)
T ss_pred             ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCC--------------ceeeeccccccccccc
Confidence            45688999999999999999999999999999999999999999999987              7899999999999999


Q ss_pred             eecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc--CCCceeeeecCCcCeEEE
Q psy15995        158 SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE--TGTSVGEISGQSKPINSC  235 (683)
Q Consensus       158 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~  235 (683)
                      +|+.|..+.+||+++|+..  .++.+|.+.|+.++|+.+...+++++-+..  +++|+-.  ..+++..+..-.+.|.++
T Consensus        76 s~GgDk~v~vwDV~TGkv~--Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s--~r~wDCRS~s~ePiQildea~D~V~Si  151 (307)
T KOG0316|consen   76 SCGGDKAVQVWDVNTGKVD--RRFRGHLAQVNTVRFNEESSVVASGSFDSS--VRLWDCRSRSFEPIQILDEAKDGVSSI  151 (307)
T ss_pred             cCCCCceEEEEEcccCeee--eecccccceeeEEEecCcceEEEeccccce--eEEEEcccCCCCccchhhhhcCceeEE
Confidence            9999999999999999965  567788899999999999999988887754  6778766  467888899999999999


Q ss_pred             EeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCcc
Q psy15995        236 DFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAH  315 (683)
Q Consensus       236 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~  315 (683)
                      .....   .+++|+.||+++.||++.++.....-+  .+|+++.|+++++..++++.|+++++.|-.+|+.+.....  |
T Consensus       152 ~v~~h---eIvaGS~DGtvRtydiR~G~l~sDy~g--~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkG--h  224 (307)
T KOG0316|consen  152 DVAEH---EIVAGSVDGTVRTYDIRKGTLSSDYFG--HPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKG--H  224 (307)
T ss_pred             Eeccc---EEEeeccCCcEEEEEeecceeehhhcC--CcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcc--c
Confidence            98876   499999999999999999987766654  5799999999999999999999999999999999999876  5


Q ss_pred             ccC--eEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcE
Q psy15995        316 KGG--VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFI  383 (683)
Q Consensus       316 ~~~--i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i  383 (683)
                      ...  -...+++.....+++|++||.+.+||+.....+..+..........+.+.|....++++...+..
T Consensus       225 kn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~~~  294 (307)
T KOG0316|consen  225 KNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATGHGDL  294 (307)
T ss_pred             ccceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecCCcee
Confidence            544  44567777788999999999999999999999999988888888889999977777766655443

>KOG0643|consensus

Probab=100.00  E-value=4.5e-32  Score=221.59  Aligned_cols=299  Identities=17%  Similarity=0.230  Sum_probs=243.0

Q ss_pred             eeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCC
Q psy15995        224 EISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS  303 (683)
Q Consensus       224 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  303 (683)
                      .+.+|..+++.+.++.+|.. |++++.|.+..+|-..+++.+-++.+|.+.|+|+..+.+.+.+++|+.|.++++||+++
T Consensus         5 ~l~GHERplTqiKyN~eGDL-lFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~t   83 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNREGDL-LFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVET   83 (327)
T ss_pred             ccccCccccceEEecCCCcE-EEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCC
Confidence            36789999999999999995 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeeEEeccCCccccCeEEEEEccCCCEEEEEECC-----CcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEe
Q psy15995        304 ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD-----KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVS  378 (683)
Q Consensus       304 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  378 (683)
                      |+.+..+.   ...+|..+.|+++|++++.+..+     +.|.++|++......                          
T Consensus        84 Gk~la~~k---~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~--------------------------  134 (327)
T KOG0643|consen   84 GKQLATWK---TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDI--------------------------  134 (327)
T ss_pred             CcEEEEee---cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhh--------------------------
Confidence            99999987   66789999999999988877543     457777776433210                          


Q ss_pred             cCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeE
Q psy15995        379 LSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELL  458 (683)
Q Consensus       379 ~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l  458 (683)
                                 ...+|...+..+.+.++.+-|.|-++.|++|.+||.|..||+++++........|.             
T Consensus       135 -----------~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~-------------  190 (327)
T KOG0643|consen  135 -----------DSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHS-------------  190 (327)
T ss_pred             -----------cccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhc-------------
Confidence                       01445666677889999999999999999999999999999999876544433333             


Q ss_pred             EEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEE
Q psy15995        459 YTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAV  538 (683)
Q Consensus       459 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  538 (683)
                                                                                     ..|+.+.+++|..++++
T Consensus       191 ---------------------------------------------------------------~~Ind~q~s~d~T~FiT  207 (327)
T KOG0643|consen  191 ---------------------------------------------------------------SKINDLQFSRDRTYFIT  207 (327)
T ss_pred             ---------------------------------------------------------------cccccccccCCcceEEe
Confidence                                                                           24677889999999999


Q ss_pred             EcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCe--EEEEECCCCccccc----------cceee
Q psy15995        539 GGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRK--VVLYRVPDFELAHN----------KEWGF  606 (683)
Q Consensus       539 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--i~i~~~~~~~~~~~----------~~~~~  606 (683)
                      ++.|.+-++||..+.+.+....  ...||++.+++|...+++.|+...-  |.-=+...++....          ....+
T Consensus       208 ~s~Dttakl~D~~tl~v~Kty~--te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkG  285 (327)
T KOG0643|consen  208 GSKDTTAKLVDVRTLEVLKTYT--TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKG  285 (327)
T ss_pred             cccCccceeeeccceeeEEEee--ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccc
Confidence            9999999999999888775544  6689999999997777776653221  22222223332211          23456


Q ss_pred             ecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCc
Q psy15995        607 HSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPA  641 (683)
Q Consensus       607 h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~  641 (683)
                      |-++|++++|+|||+..++|++||.|++..++...
T Consensus       286 HFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~~Y  320 (327)
T KOG0643|consen  286 HFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDSNY  320 (327)
T ss_pred             cccCcceeEECCCCcccccCCCCceEEEEEeccch
Confidence            99999999999999999999999999998776543

>KOG1407|consensus

Probab=100.00  E-value=1.1e-31  Score=218.53  Aligned_cols=279  Identities=19%  Similarity=0.242  Sum_probs=233.5

Q ss_pred             ccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeec-cceEEE
Q psy15995         79 DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS-IGFYIA  157 (683)
Q Consensus        79 ~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~  157 (683)
                      +.+++|.+.|.+++|+.+|.+||+|+.|+++++|++...+.........++            ..+..+++.| ....++
T Consensus        14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~------------~svdql~w~~~~~d~~a   81 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHT------------DSVDQLCWDPKHPDLFA   81 (313)
T ss_pred             HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCC------------cchhhheeCCCCCcceE
Confidence            457789999999999999999999999999999999988766666554433            5677788887 456899


Q ss_pred             eecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEe
Q psy15995        158 SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDF  237 (683)
Q Consensus       158 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  237 (683)
                      +++.|.+|++||+..+++.......   +.=..+.|+|+|++++++..+..  +...+..+.+.... ......++.++|
T Consensus        82 tas~dk~ir~wd~r~~k~~~~i~~~---~eni~i~wsp~g~~~~~~~kdD~--it~id~r~~~~~~~-~~~~~e~ne~~w  155 (313)
T KOG1407|consen   82 TASGDKTIRIWDIRSGKCTARIETK---GENINITWSPDGEYIAVGNKDDR--ITFIDARTYKIVNE-EQFKFEVNEISW  155 (313)
T ss_pred             EecCCceEEEEEeccCcEEEEeecc---CcceEEEEcCCCCEEEEecCccc--EEEEEecccceeeh-hcccceeeeeee
Confidence            9999999999999999987666554   34456899999999999887754  45555554444333 223455788889


Q ss_pred             ecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCcccc
Q psy15995        238 KPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKG  317 (683)
Q Consensus       238 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~  317 (683)
                      +.++.. ++.....|+|.|...+..+.+..++.|.....|+.|+|+|+++|+|+.|..+.+||++..-+.+.+..  +.-
T Consensus       156 ~~~nd~-Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isR--ldw  232 (313)
T KOG1407|consen  156 NNSNDL-FFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISR--LDW  232 (313)
T ss_pred             cCCCCE-EEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeecc--ccC
Confidence            877774 66666679999999999999999999999999999999999999999999999999999988888876  999


Q ss_pred             CeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceee
Q psy15995        318 GVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRV  397 (683)
Q Consensus       318 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~  397 (683)
                      +|..+.|+.||++|+++++|..|-|=+.++|..+.+++                                          
T Consensus       233 pVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~------------------------------------------  270 (313)
T KOG1407|consen  233 PVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP------------------------------------------  270 (313)
T ss_pred             ceEEEEeccCcceeeccCccceEEeEecccCCeEEEee------------------------------------------
Confidence            99999999999999999999999999999998776552                                          


Q ss_pred             eeeccccEEEEEEeCCCCEEEEEeCC
Q psy15995        398 IKGHNKPITALALSPDRGTVFTGSHD  423 (683)
Q Consensus       398 ~~~~~~~v~~~~~~~~~~~l~~~~~d  423 (683)
                         +.++...++|+|...+||-++.|
T Consensus       271 ---~~~~t~tVAWHPk~~LLAyA~dd  293 (313)
T KOG1407|consen  271 ---CEGPTFTVAWHPKRPLLAYACDD  293 (313)
T ss_pred             ---ccCCceeEEecCCCceeeEEecC
Confidence               56778889999999999877654

>KOG0275|consensus

Probab=100.00  E-value=5.1e-33  Score=233.56  Aligned_cols=287  Identities=17%  Similarity=0.239  Sum_probs=252.8

Q ss_pred             cCCCcccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCccccccc--------CcccceEEEEECCCCcEEEEecCCC
Q psy15995         37 ATLPRTQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYT--------EHSCAVNVAKYSPSGFYIASGDISG  107 (683)
Q Consensus        37 ~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~--------~h~~~v~~~~~s~d~~~las~~~dg  107 (683)
                      ..+.......+-|..|||||+||+++ .||.|.|||..+|++.+.++        -|.++|.|+.||.|...||+|+.||
T Consensus       206 r~IKFg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDG  285 (508)
T KOG0275|consen  206 RSIKFGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDG  285 (508)
T ss_pred             hheecccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCC
Confidence            34455566778889999999999999 59999999999998765544        4789999999999999999999999


Q ss_pred             CEEEEeCCCcccccccc-cccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCC
Q psy15995        108 KVRIWDTVNKEHILKNE-FHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGG  186 (683)
Q Consensus       108 ~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~  186 (683)
                      .|+||.+.+|.++.+++ .|.              ..|.++.||.|+..+++++.|.++++--+.+|+.+  ..+.+|..
T Consensus       286 kIKvWri~tG~ClRrFdrAHt--------------kGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~L--KEfrGHsS  349 (508)
T KOG0275|consen  286 KIKVWRIETGQCLRRFDRAHT--------------KGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCL--KEFRGHSS  349 (508)
T ss_pred             cEEEEEEecchHHHHhhhhhc--------------cCeeEEEEccCcchhhcccccceEEEeccccchhH--HHhcCccc
Confidence            99999999999999987 554              77999999999999999999999999999999965  56778899


Q ss_pred             CeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeec--CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce
Q psy15995        187 PIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISG--QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF  264 (683)
Q Consensus       187 ~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  264 (683)
                      -|+...|++||.++++++.+..  +.+|..++.+++.+++.  ...+|+.+..-|.++..++.+...+++.+.++. ++.
T Consensus       350 yvn~a~ft~dG~~iisaSsDgt--vkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQv  426 (508)
T KOG0275|consen  350 YVNEATFTDDGHHIISASSDGT--VKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQV  426 (508)
T ss_pred             cccceEEcCCCCeEEEecCCcc--EEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceE
Confidence            9999999999999999988765  78999999999888764  566899999999888889999999999999974 455


Q ss_pred             eeecc---ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEE
Q psy15995        265 KMTKQ---EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCK  341 (683)
Q Consensus       265 ~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  341 (683)
                      +..+.   ...+...+...+|.|+++.+.+.|+.++.+...+|+....+..  |...+..++-+|..+.+++-++||.++
T Consensus       427 VrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~V--hEkdvIGl~HHPHqNllAsYsEDgllK  504 (508)
T KOG0275|consen  427 VRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPV--HEKDVIGLTHHPHQNLLASYSEDGLLK  504 (508)
T ss_pred             EeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeec--ccccccccccCcccchhhhhcccchhh
Confidence            55553   2345667788999999999999999999999999999999876  999999999999999999999999999


Q ss_pred             EEE
Q psy15995        342 LWD  344 (683)
Q Consensus       342 iwd  344 (683)
                      +|.
T Consensus       505 LWk  507 (508)
T KOG0275|consen  505 LWK  507 (508)
T ss_pred             hcC
Confidence            995

>KOG0640|consensus

Probab=100.00  E-value=3.4e-32  Score=227.17  Aligned_cols=309  Identities=22%  Similarity=0.340  Sum_probs=240.3

Q ss_pred             ccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc---cccccccccCCCCccccee-eeeecceeeeEeeccce
Q psy15995         79 DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE---HILKNEFHPIGGPIKDIGT-LLSLTSIRNILVLSIGF  154 (683)
Q Consensus        79 ~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~  154 (683)
                      ..+..|++++.+.+|||||.++|+|+.|..|+|.|++..-   ....+..........-+.+ ..+...|+++.|.|...
T Consensus       106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~  185 (430)
T KOG0640|consen  106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET  185 (430)
T ss_pred             EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh
Confidence            3477899999999999999999999999999999997321   1111111110111111222 34567899999999999


Q ss_pred             EEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEE
Q psy15995        155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINS  234 (683)
Q Consensus       155 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  234 (683)
                      .|++|+.|++|+++|..........+.-..                                            ..+|.+
T Consensus       186 ILiS~srD~tvKlFDfsK~saKrA~K~~qd--------------------------------------------~~~vrs  221 (430)
T KOG0640|consen  186 ILISGSRDNTVKLFDFSKTSAKRAFKVFQD--------------------------------------------TEPVRS  221 (430)
T ss_pred             eEEeccCCCeEEEEecccHHHHHHHHHhhc--------------------------------------------cceeee
Confidence            999999999999999976432222221111                                            234556


Q ss_pred             EEeecCCCeEEEEeeCCCeEEEEcCCCCceeeec---cccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEecc
Q psy15995        235 CDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK---QEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG  311 (683)
Q Consensus       235 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  311 (683)
                      +.|+|.|.+ ++.|....++++||+++.++...-   .+|.+.|+++.+++.+++.++++.||.|++||--+++++.++.
T Consensus       222 iSfHPsGef-llvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~  300 (430)
T KOG0640|consen  222 ISFHPSGEF-LLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIG  300 (430)
T ss_pred             EeecCCCce-EEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHH
Confidence            666666664 777777788889998887765543   4689999999999999999999999999999999999999988


Q ss_pred             CCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecC----cceeceEEEEecCCEEEEEec-CCcEEEE
Q psy15995        312 NPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGN----QVEDQQVSCLWQGDYLLTVSL-SGFISYL  386 (683)
Q Consensus       312 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~-~g~i~~~  386 (683)
                      .......|.+..|..+++++++.+.|..+++|.+.+++.+.++....    ........+....++++.-.+ .+.+.-|
T Consensus       301 ~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsW  380 (430)
T KOG0640|consen  301 NAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSW  380 (430)
T ss_pred             hhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeec
Confidence            64445679999999999999999999999999999999999886552    223344555667777776654 5789999


Q ss_pred             ecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        387 DVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                      |.++..+....-.+|++.+..+.-+|.+..+++++.|-..++|--+
T Consensus       381 daRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  381 DARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR  426 (430)
T ss_pred             cccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence            9998777666677899999999999999999999999999999643

>KOG0313|consensus

Probab=100.00  E-value=1.4e-31  Score=229.95  Aligned_cols=286  Identities=21%  Similarity=0.325  Sum_probs=226.7

Q ss_pred             CcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccc---eEEEee
Q psy15995         83 EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIG---FYIASG  159 (683)
Q Consensus        83 ~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~  159 (683)
                      -|.+.|.++...  +++|.+|+.||.+++||.. |+....+..|.              .++..+++.-..   ..++++
T Consensus       103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-Gk~~~~~~Ght--------------~~ik~v~~v~~n~~~~~fvsa  165 (423)
T KOG0313|consen  103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-GKSIKTIVGHT--------------GPIKSVAWVIKNSSSCLFVSA  165 (423)
T ss_pred             cchhhhhhhccc--CceEEEeecCCeeEEEecC-CceEEEEecCC--------------cceeeeEEEecCCccceEEEe
Confidence            499999999988  7899999999999999964 55566666665              556655543332   369999


Q ss_pred             cCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeec
Q psy15995        160 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKP  239 (683)
Q Consensus       160 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  239 (683)
                      +.|.++++|.++.++........                                          ..||...|.++...+
T Consensus       166 s~Dqtl~Lw~~~~~~~~~~~~~~------------------------------------------~~GHk~~V~sVsv~~  203 (423)
T KOG0313|consen  166 SMDQTLRLWKWNVGENKVKALKV------------------------------------------CRGHKRSVDSVSVDS  203 (423)
T ss_pred             cCCceEEEEEecCchhhhhHHhH------------------------------------------hcccccceeEEEecC
Confidence            99999999999887644332221                                          115556666666666


Q ss_pred             CCCeEEEEeeCCCeEEEEcC-------------------------CCCceeeeccccccCeEEEEECCCCCEEEEEcCCC
Q psy15995        240 SRPFRIITGSEDNTIAVFEG-------------------------PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDG  294 (683)
Q Consensus       240 ~~~~~l~~~~~d~~i~iw~~-------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  294 (683)
                      ++. ++++|+.|.++.+|+.                         .+...+..+.+|..+|.++.|++ ...+++++.|.
T Consensus       204 sgt-r~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDH  281 (423)
T KOG0313|consen  204 SGT-RFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDH  281 (423)
T ss_pred             CCC-eEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccc
Confidence            665 4777777777777761                         12335667789999999999998 55799999999


Q ss_pred             cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEE
Q psy15995        295 KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL  374 (683)
Q Consensus       295 ~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  374 (683)
                      +|+.||+.++..+..+.   ....+.++..+|..++|++|+.|..+++||.+++.-                        
T Consensus       282 TIk~WDletg~~~~~~~---~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~g------------------------  334 (423)
T KOG0313|consen  282 TIKVWDLETGGLKSTLT---TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDG------------------------  334 (423)
T ss_pred             eEEEEEeecccceeeee---cCcceeEeecccccceeeecCCCCceeecCCCCCCC------------------------
Confidence            99999999999988886   567899999999999999999999999999998742                        


Q ss_pred             EEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEE
Q psy15995        375 LTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR-GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKA  453 (683)
Q Consensus       375 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~  453 (683)
                                       ......+.+|...|.++.|+|.. .+|++++.|+++++||+++.+.......+|...|.++.|
T Consensus       335 -----------------s~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW  397 (423)
T KOG0313|consen  335 -----------------SVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDW  397 (423)
T ss_pred             -----------------ceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEec
Confidence                             22235678899999999999955 667899999999999999988433334789999999999


Q ss_pred             e-CCeEEEEEcCCeEEEEeCC
Q psy15995        454 T-GELLYTCGIDDTIKQVDLS  473 (683)
Q Consensus       454 ~-~~~l~~~~~d~~i~~~~~~  473 (683)
                      . +..+++|+.|.+++++.-.
T Consensus       398 ~~~~~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  398 NEGGLIVSGGADNKLRIFKGS  418 (423)
T ss_pred             cCCceEEeccCcceEEEeccc
Confidence            9 7799999999999998754

>KOG1407|consensus

Probab=100.00  E-value=2.9e-31  Score=216.14  Aligned_cols=272  Identities=19%  Similarity=0.267  Sum_probs=236.9

Q ss_pred             ccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCccccc--ccCcccceEEEEECC-CCcEEEEecCCCCEEEEeCCCc
Q psy15995         42 TQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDI--YTEHSCAVNVAKYSP-SGFYIASGDISGKVRIWDTVNK  117 (683)
Q Consensus        42 ~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~--~~~h~~~v~~~~~s~-d~~~las~~~dg~i~iwd~~~~  117 (683)
                      .+..++..++|+-+|..|+.+ .++.+.||+++..+....  ..+|++.|-.++|+| ...++|+++.|.+|++||...+
T Consensus        18 ~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~   97 (313)
T KOG1407|consen   18 GHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSG   97 (313)
T ss_pred             hhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccC
Confidence            344578889999999999998 588999999998765443  568999999999998 5578999999999999999999


Q ss_pred             ccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCC
Q psy15995        118 EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDN  197 (683)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~  197 (683)
                      ++...+...               ..-..+.|+|+|.++++++.|..|...|..+.+.....++.   ..+..++|+.++
T Consensus        98 k~~~~i~~~---------------~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~---~e~ne~~w~~~n  159 (313)
T KOG1407|consen   98 KCTARIETK---------------GENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFK---FEVNEISWNNSN  159 (313)
T ss_pred             cEEEEeecc---------------CcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhccc---ceeeeeeecCCC
Confidence            887766554               23346789999999999999999999999887765554444   678889999777


Q ss_pred             CeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEE
Q psy15995        198 QRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQA  277 (683)
Q Consensus       198 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~  277 (683)
                      ..++...+.+  .+.+..+..-+++..++.|.....|+.|+|+|++ +++|+.|..+.+||++..-+++.+..+.-+|+.
T Consensus       160 d~Fflt~GlG--~v~ILsypsLkpv~si~AH~snCicI~f~p~Gry-fA~GsADAlvSLWD~~ELiC~R~isRldwpVRT  236 (313)
T KOG1407|consen  160 DLFFLTNGLG--CVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRY-FATGSADALVSLWDVDELICERCISRLDWPVRT  236 (313)
T ss_pred             CEEEEecCCc--eEEEEeccccccccccccCCcceEEEEECCCCce-EeeccccceeeccChhHhhhheeeccccCceEE
Confidence            6666655433  2677888889999999999999999999999997 999999999999999999999999999999999


Q ss_pred             EEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECC
Q psy15995        278 VRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD  337 (683)
Q Consensus       278 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  337 (683)
                      +.|+.||++||++++|..|-|=++++|..+..+.   +.++...++|+|...+|+.++.|
T Consensus       237 lSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~---~~~~t~tVAWHPk~~LLAyA~dd  293 (313)
T KOG1407|consen  237 LSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP---CEGPTFTVAWHPKRPLLAYACDD  293 (313)
T ss_pred             EEeccCcceeeccCccceEEeEecccCCeEEEee---ccCCceeEEecCCCceeeEEecC
Confidence            9999999999999999999999999999999987   88899999999999999888765

>KOG1446|consensus

Probab=100.00  E-value=8.2e-30  Score=214.58  Aligned_cols=293  Identities=19%  Similarity=0.302  Sum_probs=235.5

Q ss_pred             CceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC--CCc
Q psy15995        262 FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG--DKT  339 (683)
Q Consensus       262 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~  339 (683)
                      .+..+.+......|.++.|+++|..+++++.|..+++||..+++.+..+..  ++-.+..++|......++.++.  |.+
T Consensus         4 ~~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~s--kkyG~~~~~Fth~~~~~i~sStk~d~t   81 (311)
T KOG1446|consen    4 FRPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINS--KKYGVDLACFTHHSNTVIHSSTKEDDT   81 (311)
T ss_pred             cccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeec--ccccccEEEEecCCceEEEccCCCCCc
Confidence            344455666678899999999999999999999999999999999999975  6778889999887777777766  778


Q ss_pred             EEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEE
Q psy15995        340 CKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFT  419 (683)
Q Consensus       340 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  419 (683)
                      |+..++.+++.+                                            +.+.||...|.+++.+|-+..+++
T Consensus        82 IryLsl~dNkyl--------------------------------------------RYF~GH~~~V~sL~~sP~~d~FlS  117 (311)
T KOG1446|consen   82 IRYLSLHDNKYL--------------------------------------------RYFPGHKKRVNSLSVSPKDDTFLS  117 (311)
T ss_pred             eEEEEeecCceE--------------------------------------------EEcCCCCceEEEEEecCCCCeEEe
Confidence            999988887665                                            456899999999999999999999


Q ss_pred             EeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEE
Q psy15995        420 GSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLV  499 (683)
Q Consensus       420 ~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (683)
                      ++.|++|++||++..++......                                                         
T Consensus       118 ~S~D~tvrLWDlR~~~cqg~l~~---------------------------------------------------------  140 (311)
T KOG1446|consen  118 SSLDKTVRLWDLRVKKCQGLLNL---------------------------------------------------------  140 (311)
T ss_pred             cccCCeEEeeEecCCCCceEEec---------------------------------------------------------
Confidence            99999999999997666544321                                                         


Q ss_pred             EEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceee----cCCcCeeEEEECCC
Q psy15995        500 TVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL----DHLGPVTDCSFSPS  575 (683)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~~v~~~~~s~~  575 (683)
                                            ......|+.|+|-++|++...+.|++||++.-..-+....    +.....+.+.||||
T Consensus       141 ----------------------~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~d  198 (311)
T KOG1446|consen  141 ----------------------SGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPD  198 (311)
T ss_pred             ----------------------CCCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCC
Confidence                                  1234578999999999999888999999986533322222    24677899999999


Q ss_pred             CCEEEEEeCCCeEEEEECCCCccccccceeeecc-cEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCC
Q psy15995        576 NEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSA-KVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQ  654 (683)
Q Consensus       576 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~-~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~  654 (683)
                      |++|+.+...+.+++.|.-+|.+..........+ --.+.+|+||++++++|+.||+|.+|+++++..+..+.+. +..+
T Consensus       199 GK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~-~~~~  277 (311)
T KOG1446|consen  199 GKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGP-NGGP  277 (311)
T ss_pred             CCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCC-CCCC
Confidence            9999999999999999999999766544421122 1257789999999999999999999999999999998765 4789


Q ss_pred             eeEEEEccCCeEEEeeCCCcEEEEeec
Q psy15995        655 ITRLQWLDNDLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       655 v~~l~~~~~~~l~s~~~d~~v~vw~~~  681 (683)
                      +.++.|.|...+ -++.+..+.+|-.+
T Consensus       278 ~~~~~fnP~~~m-f~sa~s~l~fw~p~  303 (311)
T KOG1446|consen  278 VSCVRFNPRYAM-FVSASSNLVFWLPD  303 (311)
T ss_pred             ccccccCCceee-eeecCceEEEEecc
Confidence            999999876432 23345668888543

>KOG0283|consensus

Probab=100.00  E-value=5.1e-31  Score=251.21  Aligned_cols=181  Identities=22%  Similarity=0.335  Sum_probs=152.1

Q ss_pred             CCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECC-CCCEEEEEcCCCcEE
Q psy15995        219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSP-SGSHFASAGFDGKVF  297 (683)
Q Consensus       219 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~  297 (683)
                      .+++..+.||.+.|..+.|+.++  .|++++.|.+|++|++...+++..+. |.+.|+|++|+| |.+++++|+-||.++
T Consensus       359 ekP~~ef~GHt~DILDlSWSKn~--fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvR  435 (712)
T KOG0283|consen  359 EKPFCEFKGHTADILDLSWSKNN--FLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVR  435 (712)
T ss_pred             ccchhhhhccchhheecccccCC--eeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceE
Confidence            56788999999999999999998  59999999999999999999988886 999999999999 667999999999999


Q ss_pred             EEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEE
Q psy15995        298 LYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTV  377 (683)
Q Consensus       298 iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  377 (683)
                      ||++...+.+.-..   -..-|++++|.|||+..++|+.+|.+++|+....+....+.....                  
T Consensus       436 iWsI~d~~Vv~W~D---l~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~------------------  494 (712)
T KOG0283|consen  436 LWSISDKKVVDWND---LRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLH------------------  494 (712)
T ss_pred             EeecCcCeeEeehh---hhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeec------------------
Confidence            99999888877765   347899999999999999999999999999998887665532211                  


Q ss_pred             ecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCCcceecc
Q psy15995        378 SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR-GTVFTGSHDGFITRWNAKTGENDRVQG  441 (683)
Q Consensus       378 ~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~  441 (683)
                                  . .   +. ..|. .|+++.|.|.. ..+++.+.|..|+|+|.++...+..+.
T Consensus       495 ------------~-~---Kk-~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfK  541 (712)
T KOG0283|consen  495 ------------N-K---KK-KQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFK  541 (712)
T ss_pred             ------------c-C---cc-ccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhc
Confidence                        0 0   11 1233 89999999844 457788899999999998877766653

>KOG0288|consensus

Probab=100.00  E-value=3.3e-32  Score=236.32  Aligned_cols=290  Identities=20%  Similarity=0.350  Sum_probs=246.6

Q ss_pred             CceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCe--eEEeccCCccccCeEEEEEccCCCEEEEEECCCc
Q psy15995        262 FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASAD--LVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKT  339 (683)
Q Consensus       262 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  339 (683)
                      ......+..|.+.+..+.|-++...|++|+.|..|++|+....+  .+..+.+  ..++|+.+.|.++++.+++.+.|+.
T Consensus       165 S~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaG--s~g~it~~d~d~~~~~~iAas~d~~  242 (459)
T KOG0288|consen  165 SRALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAG--SLGNITSIDFDSDNKHVIAASNDKN  242 (459)
T ss_pred             hhhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhc--cCCCcceeeecCCCceEEeecCCCc
Confidence            33455667799999999999998899999999999999987766  5555544  7789999999999999999999999


Q ss_pred             EEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEE
Q psy15995        340 CKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFT  419 (683)
Q Consensus       340 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  419 (683)
                      +++|+....+..                                            .++.+|.+.|+++.|......+++
T Consensus       243 ~r~Wnvd~~r~~--------------------------------------------~TLsGHtdkVt~ak~~~~~~~vVs  278 (459)
T KOG0288|consen  243 LRLWNVDSLRLR--------------------------------------------HTLSGHTDKVTAAKFKLSHSRVVS  278 (459)
T ss_pred             eeeeeccchhhh--------------------------------------------hhhcccccceeeehhhccccceee
Confidence            999999876654                                            446789999999999887777999


Q ss_pred             EeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEE
Q psy15995        420 GSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLV  499 (683)
Q Consensus       420 ~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (683)
                      |+.|.+|+.||+....+.+...  ....+..|......++++..|++|++||.++.                        
T Consensus       279 gs~DRtiK~WDl~k~~C~kt~l--~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~------------------------  332 (459)
T KOG0288|consen  279 GSADRTIKLWDLQKAYCSKTVL--PGSQCNDIVCSISDVISGHFDKKVRFWDIRSA------------------------  332 (459)
T ss_pred             ccccchhhhhhhhhhheecccc--ccccccceEecceeeeecccccceEEEeccCC------------------------
Confidence            9999999999999988776654  44556666666888899999999999998875                        


Q ss_pred             EEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeec---CCcCeeEEEECCCC
Q psy15995        500 TVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELD---HLGPVTDCSFSPSN  576 (683)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~s~~~  576 (683)
                                   ......+....++++..++++..|.+.+.|..+.+.|+.+......+...   .....+.+.|||++
T Consensus       333 -------------~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~  399 (459)
T KOG0288|consen  333 -------------DKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDG  399 (459)
T ss_pred             -------------ceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCC
Confidence                         45566677778999999999999999999999999999998776444322   33458999999999


Q ss_pred             CEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEe
Q psy15995        577 EYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWS  636 (683)
Q Consensus       577 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~  636 (683)
                      .|+++|+.||.|+||++.++++............|++++|+|.|..|++++.++.+.+|.
T Consensus       400 ~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  400 SYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             ceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence            999999999999999999999987666552233799999999999999999999999993

>KOG0310|consensus

Probab=100.00  E-value=1.2e-30  Score=232.03  Aligned_cols=285  Identities=22%  Similarity=0.351  Sum_probs=237.0

Q ss_pred             cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee
Q psy15995        227 GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL  306 (683)
Q Consensus       227 ~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~  306 (683)
                      .....|.+++|+|..++-+++.+. -.+.+|+..+......+......+.++.|..||++|++|+..|.|++||.++...
T Consensus        24 ke~~~vssl~fsp~~P~d~aVt~S-~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~i  102 (487)
T KOG0310|consen   24 KEHNSVSSLCFSPKHPYDFAVTSS-VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVI  102 (487)
T ss_pred             cccCcceeEecCCCCCCceEEecc-cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHH
Confidence            345679999999998886766665 5799999888888887888889999999999999999999999999999777667


Q ss_pred             EEeccCCccccCeEEEEEcc-CCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEE
Q psy15995        307 VSELGNPAHKGGVYAVAWKP-DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY  385 (683)
Q Consensus       307 ~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~  385 (683)
                      +..+..  |..++..+.|+| ++..|++|+.|+.+++||+.+....                                  
T Consensus       103 LR~~~a--h~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~----------------------------------  146 (487)
T KOG0310|consen  103 LRQLYA--HQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQ----------------------------------  146 (487)
T ss_pred             HHHHhh--ccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEE----------------------------------
Confidence            777765  999999999999 5567788888999999999877631                                  


Q ss_pred             EecCCCCcceeeeeeccccEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcC
Q psy15995        386 LDVNNPSTPIRVIKGHNKPITALALSPDR-GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGID  464 (683)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d  464 (683)
                                ..+.+|++.|.|.+++|.. ..+++|+.||.|++||++....                            
T Consensus       147 ----------~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~----------------------------  188 (487)
T KOG0310|consen  147 ----------AELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTS----------------------------  188 (487)
T ss_pred             ----------EEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCc----------------------------
Confidence                      2357899999999999954 5788999999999999986531                            


Q ss_pred             CeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCc
Q psy15995        465 DTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSK  544 (683)
Q Consensus       465 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~  544 (683)
                                                                       .+.++.+..++..+.+-|.|.++++++. ..
T Consensus       189 -------------------------------------------------~v~elnhg~pVe~vl~lpsgs~iasAgG-n~  218 (487)
T KOG0310|consen  189 -------------------------------------------------RVVELNHGCPVESVLALPSGSLIASAGG-NS  218 (487)
T ss_pred             -------------------------------------------------eeEEecCCCceeeEEEcCCCCEEEEcCC-Ce
Confidence                                                             1122234446677888888889988876 57


Q ss_pred             EEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEE
Q psy15995        545 VHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVA  624 (683)
Q Consensus       545 i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~  624 (683)
                      |++||+.++.........|...|||+.+..++..|++++-|+.+++||+.+.+.+....   ..++|.+++.+||++.++
T Consensus       219 vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~---~~~pvLsiavs~dd~t~v  295 (487)
T KOG0310|consen  219 VKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK---YPGPVLSIAVSPDDQTVV  295 (487)
T ss_pred             EEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeee---cccceeeEEecCCCceEE
Confidence            99999996655544444599999999999999999999999999999999999887665   569999999999999999


Q ss_pred             EeecCCcEEEEeCCC
Q psy15995        625 SGSLDTTIIIWSLAS  639 (683)
Q Consensus       625 ~~~~d~~v~iw~~~~  639 (683)
                      .|..||.+.+-+...
T Consensus       296 iGmsnGlv~~rr~~~  310 (487)
T KOG0310|consen  296 IGMSNGLVSIRRREV  310 (487)
T ss_pred             Eecccceeeeehhhc
Confidence            999999888775443

>KOG0305|consensus

Probab=99.98  E-value=2.7e-30  Score=239.87  Aligned_cols=276  Identities=19%  Similarity=0.288  Sum_probs=245.3

Q ss_pred             EeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccc-ccC
Q psy15995         50 LGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF-HPI  128 (683)
Q Consensus        50 ~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~-~~~  128 (683)
                      ++|| ....+|.+.+..|++|+..+++.......+...|+++.|+++|++||+|..+|.|.|||..+.+.+..+.. |. 
T Consensus       183 ldWs-s~n~laValg~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~-  260 (484)
T KOG0305|consen  183 LDWS-SANVLAVALGQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHA-  260 (484)
T ss_pred             hhcc-cCCeEEEEecceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcC-
Confidence            5678 66789999999999999999997776666699999999999999999999999999999999988888877 44 


Q ss_pred             CCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCc
Q psy15995        129 GGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE  208 (683)
Q Consensus       129 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~  208 (683)
                                   ..|.+++|.  +..+.+|+.++.|..+|+...+.... .+..|...|..++|++|+.++|+++.++.
T Consensus       261 -------------~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~-~~~~H~qeVCgLkws~d~~~lASGgnDN~  324 (484)
T KOG0305|consen  261 -------------SRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVS-TLQGHRQEVCGLKWSPDGNQLASGGNDNV  324 (484)
T ss_pred             -------------ceeEEEecc--CceEEEecCCCcEEEEEEecchhhhh-hhhcccceeeeeEECCCCCeeccCCCccc
Confidence                         778888888  77899999999999999999887666 58889999999999999999999887765


Q ss_pred             eEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEee--CCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCE
Q psy15995        209 RFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGS--EDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSH  286 (683)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  286 (683)
                        +.+|+.....+...+..|...|.+++|+|-...+|++|+  .|++|++||..+++.+..... ...|..+.|++..+.
T Consensus       325 --~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt-gsQVcsL~Wsk~~kE  401 (484)
T KOG0305|consen  325 --VFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDT-GSQVCSLIWSKKYKE  401 (484)
T ss_pred             --eEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccccc-CCceeeEEEcCCCCE
Confidence              678888788899999999999999999998887888864  599999999999998887764 467999999999987


Q ss_pred             EEEE--cCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCC
Q psy15995        287 FASA--GFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETK  348 (683)
Q Consensus       287 l~~~--~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  348 (683)
                      |+++  ..++.|.||+..+.+.+..+..  |...|..++++|||..+++++.|.++++|++-..
T Consensus       402 i~sthG~s~n~i~lw~~ps~~~~~~l~g--H~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  402 LLSTHGYSENQITLWKYPSMKLVAELLG--HTSRVLYLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             EEEecCCCCCcEEEEeccccceeeeecC--CcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence            7664  4577899999999998888876  9999999999999999999999999999998765

>KOG0310|consensus

Probab=99.98  E-value=5.8e-30  Score=227.71  Aligned_cols=280  Identities=24%  Similarity=0.346  Sum_probs=235.4

Q ss_pred             CCCeEEEeeCCCCCe-EEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccc
Q psy15995         44 RGQPIVLGGDPKGKN-FLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILK  122 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~-l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~  122 (683)
                      .+.+.+++|||...+ +|.++.-.+.+|+..+....+.+......|.++.|-.||++||.|+..|.|+|+|..+...+..
T Consensus        26 ~~~vssl~fsp~~P~d~aVt~S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~  105 (487)
T KOG0310|consen   26 HNSVSSLCFSPKHPYDFAVTSSVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQ  105 (487)
T ss_pred             cCcceeEecCCCCCCceEEecccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHH
Confidence            468899999997776 7778888999999999999888888899999999999999999999999999999888777777


Q ss_pred             cccccCCCCcccceeeeeecceeeeEeecc-ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEE
Q psy15995        123 NEFHPIGGPIKDIGTLLSLTSIRNILVLSI-GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMV  201 (683)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  201 (683)
                      +..|.              .++..+.|+|+ ++.|++|+.|+.+++||+.+...                          
T Consensus       106 ~~ah~--------------apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v--------------------------  145 (487)
T KOG0310|consen  106 LYAHQ--------------APVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV--------------------------  145 (487)
T ss_pred             Hhhcc--------------CceeEEEecccCCeEEEecCCCceEEEEEcCCcEE--------------------------
Confidence            77776              77888889985 45777888888899999876531                          


Q ss_pred             EEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC-ceeeeccccccCeEEEEE
Q psy15995        202 VVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF-KFKMTKQEHSRFVQAVRY  280 (683)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~  280 (683)
                                          ..++.+|++.|.+.+++|..+.++++|+.||.|++||.+.. ..+.++ .|..+|..+.+
T Consensus       146 --------------------~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el-nhg~pVe~vl~  204 (487)
T KOG0310|consen  146 --------------------QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL-NHGCPVESVLA  204 (487)
T ss_pred             --------------------EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEe-cCCCceeeEEE
Confidence                                12346788888888888888878999999999999999887 444444 59999999999


Q ss_pred             CCCCCEEEEEcCCCcEEEEeCCCC-eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCc
Q psy15995        281 SPSGSHFASAGFDGKVFLYDGASA-DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQ  359 (683)
Q Consensus       281 ~~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  359 (683)
                      -|.|..+++++ ...|++||+.+| +.+..+..  |...|+|+.+..++..|++++-|+.+++||+.+.+.+..+.    
T Consensus       205 lpsgs~iasAg-Gn~vkVWDl~~G~qll~~~~~--H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~----  277 (487)
T KOG0310|consen  205 LPSGSLIASAG-GNSVKVWDLTTGGQLLTSMFN--HNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK----  277 (487)
T ss_pred             cCCCCEEEEcC-CCeEEEEEecCCceehhhhhc--ccceEEEEEeecCCceEeecccccceEEEEccceEEEEeee----
Confidence            99999999988 468999999855 55555543  99999999999999999999999999999988777665542    


Q ss_pred             ceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        360 VEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       360 ~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                                                               -.++|.+++.+|+++.++.|..+|.+.+-+..
T Consensus       278 -----------------------------------------~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~  309 (487)
T KOG0310|consen  278 -----------------------------------------YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRRE  309 (487)
T ss_pred             -----------------------------------------cccceeeEEecCCCceEEEecccceeeeehhh
Confidence                                                     35789999999999999999999988776443

>KOG0640|consensus

Probab=99.98  E-value=1.2e-30  Score=217.88  Aligned_cols=298  Identities=20%  Similarity=0.294  Sum_probs=240.6

Q ss_pred             eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC------------C------ceeeeccccccCeEEEEECCCC
Q psy15995        223 GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP------------F------KFKMTKQEHSRFVQAVRYSPSG  284 (683)
Q Consensus       223 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~------------~------~~~~~~~~~~~~v~~~~~~~~~  284 (683)
                      ..+..|..++.+.+|+|||.+ +++|+.|..|+|.|.+.            +      -.++++-.|..+|+++.|+|..
T Consensus       106 ~ylt~HK~~cR~aafs~DG~l-vATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre  184 (430)
T KOG0640|consen  106 KYLTSHKSPCRAAAFSPDGSL-VATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE  184 (430)
T ss_pred             EEEeecccceeeeeeCCCCcE-EEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh
Confidence            446789999999999999995 99999999999999651            1      1355677899999999999999


Q ss_pred             CEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceece
Q psy15995        285 SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQ  364 (683)
Q Consensus       285 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  364 (683)
                      ..|++++.|++|++||.......+.++......+|.++.|+|.|.+|++|..-..+++||+++.++...-          
T Consensus       185 ~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvsa----------  254 (430)
T KOG0640|consen  185 TILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSA----------  254 (430)
T ss_pred             heEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeec----------
Confidence            9999999999999999887655444443336779999999999999999999999999999987653221          


Q ss_pred             EEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCC
Q psy15995        365 VSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGH  444 (683)
Q Consensus       365 ~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~  444 (683)
                                                     ..-..|.+.|+++.+++.+++.++++.||.|++||--+++++..+...|
T Consensus       255 -------------------------------nPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH  303 (430)
T KOG0640|consen  255 -------------------------------NPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAH  303 (430)
T ss_pred             -------------------------------CcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhc
Confidence                                           0124589999999999999999999999999999999999988887666


Q ss_pred             CcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCC
Q psy15995        445 GNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEP  524 (683)
Q Consensus       445 ~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  524 (683)
                      .+.                                                                           ++
T Consensus       304 ~gs---------------------------------------------------------------------------ev  308 (430)
T KOG0640|consen  304 GGS---------------------------------------------------------------------------EV  308 (430)
T ss_pred             CCc---------------------------------------------------------------------------ee
Confidence            532                                                                           34


Q ss_pred             cEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeec----CCcCeeEEEECCCCCEEEEEe-CCCeEEEEECCCCccc
Q psy15995        525 SSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELD----HLGPVTDCSFSPSNEYLVASD-AHRKVVLYRVPDFELA  599 (683)
Q Consensus       525 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~  599 (683)
                      .+..|..+++++++.+.|..+++|++.+++.+......    ....-+...|.....|++.-+ ..+.+.-||..+....
T Consensus       309 cSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~  388 (430)
T KOG0640|consen  309 CSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRV  388 (430)
T ss_pred             eeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhh
Confidence            55667777888888888888888888877766544421    112234556777777777654 4577999999998877


Q ss_pred             cccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCC
Q psy15995        600 HNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       600 ~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~  638 (683)
                      .....+ |.+.+..+.-||.+.-+.+++.|-.+++|--+
T Consensus       389 ~l~slg-Hn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  389 ALLSLG-HNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR  426 (430)
T ss_pred             hhcccC-CCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence            766666 99999999999999999999999999999643

>KOG0268|consensus

Probab=99.97  E-value=2.3e-31  Score=227.08  Aligned_cols=294  Identities=18%  Similarity=0.259  Sum_probs=240.8

Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeC
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDG  301 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  301 (683)
                      +..+.+|.+.|.+++=+|..-..+++|+.||.|++||+.+..+...+..|.+.|..+++..  ..+++++.|.+|+.|.+
T Consensus        59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~  136 (433)
T KOG0268|consen   59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKI  136 (433)
T ss_pred             hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeec
Confidence            4567899999999999999855699999999999999999999999999999999999987  56888899999999997


Q ss_pred             CCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCC
Q psy15995        302 ASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSG  381 (683)
Q Consensus       302 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g  381 (683)
                      .. ....++.   ....+..+.-+..+..+++++.  .|.|||.+...+++.+                           
T Consensus       137 ~~-~p~~til---g~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~sm---------------------------  183 (433)
T KOG0268|consen  137 DG-PPLHTIL---GKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSM---------------------------  183 (433)
T ss_pred             cC-Ccceeee---ccccccccccccccccccccCc--eeeecccccCCcccee---------------------------
Confidence            65 3555553   4556777777777788898886  4899998866655443                           


Q ss_pred             cEEEEecCCCCcceeeeeeccccEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEE
Q psy15995        382 FISYLDVNNPSTPIRVIKGHNKPITALALSPDR-GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYT  460 (683)
Q Consensus       382 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  460 (683)
                                       ......|.++.|+|.. ..|+++..|+.|.+||++++.++.....                  
T Consensus       184 -----------------swG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~------------------  228 (433)
T KOG0268|consen  184 -----------------SWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVIL------------------  228 (433)
T ss_pred             -----------------ecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeee------------------
Confidence                             3445678999999965 5667788999999999998877655421                  


Q ss_pred             EEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEc
Q psy15995        461 CGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGG  540 (683)
Q Consensus       461 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  540 (683)
                                                                                  ......++|+|+.-.+++|+
T Consensus       229 ------------------------------------------------------------~mRTN~IswnPeafnF~~a~  248 (433)
T KOG0268|consen  229 ------------------------------------------------------------TMRTNTICWNPEAFNFVAAN  248 (433)
T ss_pred             ------------------------------------------------------------eccccceecCccccceeecc
Confidence                                                                        11346789999888899999


Q ss_pred             CCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCC
Q psy15995        541 ADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDS  620 (683)
Q Consensus       541 ~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~  620 (683)
                      +|..++.||+...........+|.+.|.+++|||.|+-+++|+.|.+|+||....+.-....... ....|.++.||.|.
T Consensus       249 ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtk-RMq~V~~Vk~S~Ds  327 (433)
T KOG0268|consen  249 EDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTK-RMQHVFCVKYSMDS  327 (433)
T ss_pred             ccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHh-hhheeeEEEEeccc
Confidence            99999999999887776777789999999999999999999999999999999876543222111 34569999999999


Q ss_pred             CeEEEeecCCcEEEEeCCCCceeeEe
Q psy15995        621 ALVASGSLDTTIIIWSLASPAKHIII  646 (683)
Q Consensus       621 ~~l~~~~~d~~v~iw~~~~~~~~~~~  646 (683)
                      +++++||+|+.|++|.....+.+..+
T Consensus       328 kyi~SGSdd~nvRlWka~Aseklgv~  353 (433)
T KOG0268|consen  328 KYIISGSDDGNVRLWKAKASEKLGVI  353 (433)
T ss_pred             cEEEecCCCcceeeeecchhhhcCCC
Confidence            99999999999999998776655443

>KOG1963|consensus

Probab=99.97  E-value=1.7e-28  Score=234.87  Aligned_cols=519  Identities=14%  Similarity=0.155  Sum_probs=336.3

Q ss_pred             eeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCC---cEEEEecCCCCEEEEeCCCccccccccccc
Q psy15995         51 GGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSG---FYIASGDISGKVRIWDTVNKEHILKNEFHP  127 (683)
Q Consensus        51 ~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~---~~las~~~dg~i~iwd~~~~~~~~~~~~~~  127 (683)
                      .||+|+++++...++.|.||...++++++.|.+|..+++.+.+.|..   .++.+++.||.|++||...++++..+..+.
T Consensus        23 vfSnD~k~l~~~~~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~  102 (792)
T KOG1963|consen   23 VFSNDAKFLFLCTGNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNL  102 (792)
T ss_pred             ccccCCcEEEEeeCCEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCC
Confidence            48999999999999999999999999999999999999999999844   477899999999999999999888876653


Q ss_pred             CCCCcccceeeeeecceeeeE-eec-cceEEEeec--CCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEE
Q psy15995        128 IGGPIKDIGTLLSLTSIRNIL-VLS-IGFYIASGD--ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV  203 (683)
Q Consensus       128 ~~~~~~~~~~~~~~~~i~~~~-~s~-~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  203 (683)
                      .-..   .............. .+. +-..+...+  ..++++-+.+.+-.....-....+ ..-..+.+++.|++...+
T Consensus       103 ~v~~---~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~-~~~~~I~~~~~ge~~~i~  178 (792)
T KOG1963|consen  103 PVHA---LVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEH-QEPKSIVDNNSGEFKGIV  178 (792)
T ss_pred             ceeE---EEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhh-cCCccEEEcCCceEEEEE
Confidence            1110   00000001111111 111 111111111  122222233222111110111111 125678899999888777


Q ss_pred             ecCCceEEEEEEccCCCce----eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC----CceeeeccccccCe
Q psy15995        204 GEGRERFGHVFMSETGTSV----GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP----FKFKMTKQEHSRFV  275 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~----~~~~~~~~~~~~~v  275 (683)
                      ....   +.+|....+...    ..-..|...+++.+++|++++ ++++..||.|.+|.--.    ......+.-|...|
T Consensus       179 ~~~~---~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~-~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V  254 (792)
T KOG1963|consen  179 HMCK---IHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERY-LAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEV  254 (792)
T ss_pred             Eeee---EEEEEecccceeeccchhhhhhcccceeEEeccccce-EEEeccCCcEEEEeccccccccccceEEEeccccc
Confidence            6654   455665553311    112346777999999999996 99999999999997322    22345667799999


Q ss_pred             EEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEE
Q psy15995        276 QAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       276 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  355 (683)
                      .+++|+++|.+|++|+.++.+.+|.+.+++ .+-+  |.-.++|..+.++||+.+.+....|+.|.+....+......+.
T Consensus       255 ~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfL--PRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIs  331 (792)
T KOG1963|consen  255 NSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFL--PRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTIS  331 (792)
T ss_pred             ceeEEecCCceEeecccceEEEEEeecCCC-cccc--cccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhcc
Confidence            999999999999999999999999999988 3333  3378899999999999999999999999999887666544432


Q ss_pred             ecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCC
Q psy15995        356 MGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE  435 (683)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~  435 (683)
                      .......                                 ..-....+-.+.++++|.-+.++-.+..|.|.+||+.+.+
T Consensus       332 gi~~~~~---------------------------------~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~  378 (792)
T KOG1963|consen  332 GIKPPTP---------------------------------STKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDS  378 (792)
T ss_pred             CccCCCc---------------------------------cccccccccceeEEEcCCCCceeecCCCceEEEEeccccc
Confidence            2111000                                 0011224456778889977788888899999999998877


Q ss_pred             cceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCcee
Q psy15995        436 NDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKV  515 (683)
Q Consensus       436 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  515 (683)
                      .+..+.........     +        |+.                                                 
T Consensus       379 ~i~~~~v~~~n~~~-----~--------~~n-------------------------------------------------  396 (792)
T KOG1963|consen  379 TIYKLQVCDENYSD-----G--------DVN-------------------------------------------------  396 (792)
T ss_pred             eeeeEEEEeecccC-----C--------cce-------------------------------------------------
Confidence            65443210000000     0        000                                                 


Q ss_pred             eeecCCCCCcEEEEccCCCEEEEEc--------CC--CcEEEEEcCCCcc----CcceeecCCcCeeEEEECC-CC-CEE
Q psy15995        516 SSLPIDYEPSSISLDHEHGLVAVGG--------AD--SKVHIYELNNKSL----SPKAELDHLGPVTDCSFSP-SN-EYL  579 (683)
Q Consensus       516 ~~~~~~~~~~~~~~~~~~~~l~~~~--------~d--g~i~i~d~~~~~~----~~~~~~~~~~~v~~~~~s~-~~-~~l  579 (683)
                          ....++.++.+..|.++++.-        .|  -.+++|-......    ..+...+|+..+...++.+ .. ...
T Consensus       397 ----~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~  472 (792)
T KOG1963|consen  397 ----IQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRC  472 (792)
T ss_pred             ----eEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCccccee
Confidence                001234444444555555542        22  3478887765432    2333446777766666654 22 378


Q ss_pred             EEEeCCCeEEEEECCCCcccc--------ccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCC-ceeeEeecCC
Q psy15995        580 VASDAHRKVVLYRVPDFELAH--------NKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASP-AKHIIIKNAH  650 (683)
Q Consensus       580 ~~~~~d~~i~i~~~~~~~~~~--------~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~-~~~~~~~~~~  650 (683)
                      ++++.||.+++|-+.+.+-+.        ......|..++++++||.||..|+.+ .|++|.+||..+. +.......  
T Consensus       473 vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~s-~~~~Itiwd~~~~~~l~~~~~~--  549 (792)
T KOG1963|consen  473 VTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAVS-FDDTITIWDYDTKNELLCTEGS--  549 (792)
T ss_pred             EEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEEEe-cCCEEEEecCCChhhhhccccc--
Confidence            999999999999984322211        11111378999999999999777655 5778999999984 33332221  


Q ss_pred             CCCCeeEEEEc---cCCeEEEeeCCCcEEEEeecc
Q psy15995        651 PQSQITRLQWL---DNDLLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       651 ~~~~v~~l~~~---~~~~l~s~~~d~~v~vw~~~~  682 (683)
                      ...++..+.|.   .....+.....+.+.+|++-+
T Consensus       550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~WNll~  584 (792)
T KOG1963|consen  550 RNWPIAELLFTAQTQNDGALVHATQQRLSVWNLLS  584 (792)
T ss_pred             cccchHhHhhhcccccccceeeccCceEehHhhhh
Confidence            23455566655   333455556677889998754

>KOG0772|consensus

Probab=99.97  E-value=1.1e-29  Score=227.19  Aligned_cols=312  Identities=21%  Similarity=0.324  Sum_probs=235.2

Q ss_pred             CCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee----EEeccCCccccCeEEEEEccCCCEEEEEEC
Q psy15995        261 PFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL----VSELGNPAHKGGVYAVAWKPDGTQLLTASG  336 (683)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  336 (683)
                      .+.....+.+|+..|.++++.|.|-.|++|+.|..|++||+.....    .+.+. |.....|.+++|++.+..|++.+.
T Consensus       156 P~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~-P~E~h~i~sl~ys~Tg~~iLvvsg  234 (641)
T KOG0772|consen  156 PGSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQ-PCETHQINSLQYSVTGDQILVVSG  234 (641)
T ss_pred             CccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccC-cccccccceeeecCCCCeEEEEec
Confidence            3445567788999999999999999999999999999999875432    22222 456778999999999999999998


Q ss_pred             CCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC-C
Q psy15995        337 DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR-G  415 (683)
Q Consensus       337 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~  415 (683)
                      ....+++|....+ +.++..+                        .-++-|+       ...++|...++|.+|+|+. .
T Consensus       235 ~aqakl~DRdG~~-~~e~~KG------------------------DQYI~Dm-------~nTKGHia~lt~g~whP~~k~  282 (641)
T KOG0772|consen  235 SAQAKLLDRDGFE-IVEFSKG------------------------DQYIRDM-------YNTKGHIAELTCGCWHPDNKE  282 (641)
T ss_pred             CcceeEEccCCce-eeeeecc------------------------chhhhhh-------hccCCceeeeeccccccCccc
Confidence            8999999976444 3333221                        1122222       2357899999999999965 6


Q ss_pred             EEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecC
Q psy15995        416 TVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDE  495 (683)
Q Consensus       416 ~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (683)
                      .+++++.||++++||+...+.......                             ....                    
T Consensus       283 ~FlT~s~DgtlRiWdv~~~k~q~qVik-----------------------------~k~~--------------------  313 (641)
T KOG0772|consen  283 EFLTCSYDGTLRIWDVNNTKSQLQVIK-----------------------------TKPA--------------------  313 (641)
T ss_pred             ceEEecCCCcEEEEecCCchhheeEEe-----------------------------eccC--------------------
Confidence            788999999999999987653322210                             0000                    


Q ss_pred             CeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceee--cCCc--CeeEEE
Q psy15995        496 NTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL--DHLG--PVTDCS  571 (683)
Q Consensus       496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~--~v~~~~  571 (683)
                                            -...-+++..+|++|++++|.|+.||.|.+|+..+....+....  .|..  .|+++.
T Consensus       314 ----------------------~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~  371 (641)
T KOG0772|consen  314 ----------------------GGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSIS  371 (641)
T ss_pred             ----------------------CCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEE
Confidence                                  01122568889999999999999999999999865544433333  3666  899999


Q ss_pred             ECCCCCEEEEEeCCCeEEEEECCCCcccccccee-eecccEEEEEecCCCCeEEEeec------CCcEEEEeCCCCceee
Q psy15995        572 FSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWG-FHSAKVNCVAWSPDSALVASGSL------DTTIIIWSLASPAKHI  644 (683)
Q Consensus       572 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~h~~~v~~~~~s~d~~~l~~~~~------d~~v~iw~~~~~~~~~  644 (683)
                      ||+||++|++-+.|+++++||+...+.......+ ...-+-+.++||||.++|++|..      .|++++||..+-+.+.
T Consensus       372 FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~  451 (641)
T KOG0772|consen  372 FSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVY  451 (641)
T ss_pred             eccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEE
Confidence            9999999999999999999999875543221111 12345678899999999999764      5689999999988888


Q ss_pred             EeecCCCCCCeeEEEEcc-CCeEEEeeCCCcEEEE
Q psy15995        645 IIKNAHPQSQITRLQWLD-NDLLVSVGQDCNTKIW  678 (683)
Q Consensus       645 ~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~v~vw  678 (683)
                      .+..  ....|..+.|.+ -+.++.++.||.++||
T Consensus       452 ki~i--~~aSvv~~~WhpkLNQi~~gsgdG~~~vy  484 (641)
T KOG0772|consen  452 KIDI--STASVVRCLWHPKLNQIFAGSGDGTAHVY  484 (641)
T ss_pred             EecC--CCceEEEEeecchhhheeeecCCCceEEE
Confidence            8866  468899999994 4678888889999887

>KOG0283|consensus

Probab=99.97  E-value=5e-30  Score=244.52  Aligned_cols=306  Identities=17%  Similarity=0.225  Sum_probs=212.2

Q ss_pred             eeeecc-ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc--CCCEEEEEECCCcE
Q psy15995        264 FKMTKQ-EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP--DGTQLLTASGDKTC  340 (683)
Q Consensus       264 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i  340 (683)
                      ..+.+. .|.+.|+++.|++||++||+|+.|+.|+||.+...+....     +...-.++.+.-  ++..-.+....+.+
T Consensus       258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~-----~~~~~~~~~~~~~~~s~~~p~~s~~~~~  332 (712)
T KOG0283|consen  258 VVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRV-----AEGDSSCMYFEYNANSQIEPSTSSEEKI  332 (712)
T ss_pred             EeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcc-----cccccchhhhhhhhccccCccccccccc
Confidence            344555 8999999999999999999999999999999876544111     222222222211  11100000000000


Q ss_pred             EE--EECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEE
Q psy15995        341 KL--WDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVF  418 (683)
Q Consensus       341 ~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  418 (683)
                      .-  -..+++..           ... ...|..               ...-..+|+..+.+|.+.|..+.|+.+ ++|+
T Consensus       333 ~~~~s~~~~~~~-----------s~~-~~~p~~---------------~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLL  384 (712)
T KOG0283|consen  333 SSRTSSSRKGSQ-----------SPC-VLLPLK---------------AFVFSEKPFCEFKGHTADILDLSWSKN-NFLL  384 (712)
T ss_pred             cccccccccccC-----------Ccc-ccCCCc---------------cccccccchhhhhccchhheecccccC-CeeE
Confidence            00  00000000           000 000000               000115678889999999999999976 6899


Q ss_pred             EEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeE
Q psy15995        419 TGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTL  498 (683)
Q Consensus       419 ~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (683)
                      +++.|.+|++|++...+++..+.  |..-                                                   
T Consensus       385 SSSMDKTVRLWh~~~~~CL~~F~--Hndf---------------------------------------------------  411 (712)
T KOG0283|consen  385 SSSMDKTVRLWHPGRKECLKVFS--HNDF---------------------------------------------------  411 (712)
T ss_pred             eccccccEEeecCCCcceeeEEe--cCCe---------------------------------------------------
Confidence            99999999999999888877764  4444                                                   


Q ss_pred             EEEEeceEEEEeCCceeeeecCCCCCcEEEEcc-CCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCC
Q psy15995        499 VTVTVKQISIVENGAKVSSLPIDYEPSSISLDH-EHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNE  577 (683)
Q Consensus       499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~  577 (683)
                                               |+|++|+| |.+++++|+-||+++||++...+...-..  -..-|++++|+|||+
T Consensus       412 -------------------------VTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D--l~~lITAvcy~PdGk  464 (712)
T KOG0283|consen  412 -------------------------VTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND--LRDLITAVCYSPDGK  464 (712)
T ss_pred             -------------------------eEEEEecccCCCcEeecccccceEEeecCcCeeEeehh--hhhhheeEEeccCCc
Confidence                                     45666666 56777888888888888887776653333  347799999999999


Q ss_pred             EEEEEeCCCeEEEEECCCCccccccceeee------cccEEEEEecCCC-CeEEEeecCCcEEEEeCCCCceeeEeecCC
Q psy15995        578 YLVASDAHRKVVLYRVPDFELAHNKEWGFH------SAKVNCVAWSPDS-ALVASGSLDTTIIIWSLASPAKHIIIKNAH  650 (683)
Q Consensus       578 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h------~~~v~~~~~s~d~-~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~  650 (683)
                      +.++|+.+|.+++|+....++........|      ...|+.+.|.|.. ..+++.+.|..|+|+|..+...+..+++.+
T Consensus       465 ~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~  544 (712)
T KOG0283|consen  465 GAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFR  544 (712)
T ss_pred             eEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccc
Confidence            999999999999999998777654433322      2379999999843 357777889999999999888888888766


Q ss_pred             CCCCeeEEEEc-cCCeEEEeeCCCcEEEEeecc
Q psy15995        651 PQSQITRLQWL-DNDLLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       651 ~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~~~  682 (683)
                      ....=..-.|+ |+++++++++|..|.+|+++.
T Consensus       545 n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~  577 (712)
T KOG0283|consen  545 NTSSQISASFSSDGKHIVSASEDSWVYIWKNDS  577 (712)
T ss_pred             cCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence            55555666777 999999999999999999854

>KOG0277|consensus

Probab=99.97  E-value=3.4e-29  Score=203.32  Aligned_cols=282  Identities=18%  Similarity=0.282  Sum_probs=226.2

Q ss_pred             eeEEEEcCC-CCeEEEEecC-----CceEEEEEEccCCCceeeee--cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcC
Q psy15995        188 IKDIAWSPD-NQRMVVVGEG-----RERFGHVFMSETGTSVGEIS--GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG  259 (683)
Q Consensus       188 i~~~~~s~~-~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~  259 (683)
                      =.++.|||- ..+|+++...     +...+.+.+...++-+.+..  .-.+.+..++|+++....+++++.||++++||.
T Consensus        11 GysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~   90 (311)
T KOG0277|consen   11 GYSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDL   90 (311)
T ss_pred             cceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEecc
Confidence            367889983 3444444321     12224455544344444433  456789999999998888999999999999995


Q ss_pred             C-CCceeeeccccccCeEEEEECCC-CCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc-CCCEEEEEEC
Q psy15995        260 P-PFKFKMTKQEHSRFVQAVRYSPS-GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP-DGTQLLTASG  336 (683)
Q Consensus       260 ~-~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~  336 (683)
                      . ..+++..++.|..+|.++.|++- ++.+++++.|++|++|+..-++.+.++..  |...|...+|+| ..+.+++++.
T Consensus        91 ~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~g--h~~~Iy~a~~sp~~~nlfas~Sg  168 (311)
T KOG0277|consen   91 TMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNG--HNSCIYQAAFSPHIPNLFASASG  168 (311)
T ss_pred             CCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecC--CccEEEEEecCCCCCCeEEEccC
Confidence            4 34577888999999999999995 45778889999999999999999999876  999999999999 6789999999


Q ss_pred             CCcEEEEECCCCceeeEEEecCcceeceEEEEe-cCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC-
Q psy15995        337 DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW-QGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR-  414 (683)
Q Consensus       337 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-  414 (683)
                      |+.+++||++.......+. .+..++.+..++. +...+++|+.|+.|+.||+++-..++..+.+|.-.|..+.|+|.. 
T Consensus       169 d~~l~lwdvr~~gk~~~i~-ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~  247 (311)
T KOG0277|consen  169 DGTLRLWDVRSPGKFMSIE-AHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHA  247 (311)
T ss_pred             CceEEEEEecCCCceeEEE-eccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchh
Confidence            9999999998764444443 3334444444443 678899999999999999999999999999999999999999954 


Q ss_pred             CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe---CCeEEEEEcCCeEEEEeC
Q psy15995        415 GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT---GELLYTCGIDDTIKQVDL  472 (683)
Q Consensus       415 ~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~~~~  472 (683)
                      ..|++++.|-++++||...+.........|..-+..+.++   +.++++++.|+.+++|+.
T Consensus       248 ~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  248 SLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             hHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            6788999999999999987665555556788889999887   889999999999999984

>KOG0289|consensus

Probab=99.97  E-value=8.4e-29  Score=216.67  Aligned_cols=286  Identities=17%  Similarity=0.188  Sum_probs=235.0

Q ss_pred             CCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccc
Q psy15995         44 RGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILK  122 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~  122 (683)
                      ...++++...|....+.++ .+..+.++|.+.++.+.+|+||...|+.+.|+|+...+++++.|..|+||..........
T Consensus       219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~  298 (506)
T KOG0289|consen  219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTS  298 (506)
T ss_pred             CCCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccc
Confidence            3456777777775556655 677999999999999999999999999999999999999999999999999988776655


Q ss_pred             cccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEE
Q psy15995        123 NEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVV  202 (683)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  202 (683)
                      ...|.              .+|+.+...|.|.||++++.|++..+.|++++..+....-...                  
T Consensus       299 ~~~h~--------------~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s------------------  346 (506)
T KOG0289|consen  299 SRPHE--------------EPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETS------------------  346 (506)
T ss_pred             ccccc--------------ccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccc------------------
Confidence            55554              7899999999999999999999999999988875543322111                  


Q ss_pred             EecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECC
Q psy15995        203 VGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSP  282 (683)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~  282 (683)
                                                .-.+++.+|+|||- ++.+|..|+.+++||+........+.+|.++|..++|+.
T Consensus       347 --------------------------~v~~ts~~fHpDgL-ifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsE  399 (506)
T KOG0289|consen  347 --------------------------DVEYTSAAFHPDGL-IFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSE  399 (506)
T ss_pred             --------------------------cceeEEeeEcCCce-EEeccCCCceEEEEEcCCccccccCCCCCCceeEEEecc
Confidence                                      11256667777776 489999999999999999999999999999999999999


Q ss_pred             CCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCccee
Q psy15995        283 SGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVED  362 (683)
Q Consensus       283 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  362 (683)
                      +|-+|++++.|+.|++||++..+..+++..+ ...++.++.|.+.|++|+.++.+=.|++++-.+.+             
T Consensus       400 NGY~Lat~add~~V~lwDLRKl~n~kt~~l~-~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~-------------  465 (506)
T KOG0289|consen  400 NGYWLATAADDGSVKLWDLRKLKNFKTIQLD-EKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKS-------------  465 (506)
T ss_pred             CceEEEEEecCCeEEEEEehhhcccceeecc-ccccceeEEEcCCCCeEEeecceeEEEEEeccccc-------------
Confidence            9999999999999999999998888777653 34479999999999999999776555555433322             


Q ss_pred             ceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcC
Q psy15995        363 QQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNA  431 (683)
Q Consensus       363 ~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~  431 (683)
                                                   ...+..+..|.+..+++.|....+++++++.|..++++.+
T Consensus       466 -----------------------------W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  466 -----------------------------WTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             -----------------------------ceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence                                         2223445667888999999999999999999999888754

>KOG0288|consensus

Probab=99.97  E-value=2.4e-30  Score=224.87  Aligned_cols=290  Identities=20%  Similarity=0.286  Sum_probs=243.0

Q ss_pred             CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc--eeeeccccccCeEEEEECCCCCEEEEEcCCCcEE
Q psy15995        220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK--FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVF  297 (683)
Q Consensus       220 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  297 (683)
                      .....+..|.+.+..+.|-++.. .|++|+.|..|++|+....+  ...++.+..+.|+++.|.++++.+++++.|+.++
T Consensus       166 ~~~~~ld~h~gev~~v~~l~~sd-tlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r  244 (459)
T KOG0288|consen  166 RALFVLDAHEGEVHDVEFLRNSD-TLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLR  244 (459)
T ss_pred             hhhhhhhccccccceeEEccCcc-hhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCcee
Confidence            34456778999999999999966 49999999999999987766  6777888889999999999999999999999999


Q ss_pred             EEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEE
Q psy15995        298 LYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTV  377 (683)
Q Consensus       298 iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  377 (683)
                      +|++.+.+...++.+  |...|+++.|......+++++.|.++++||+....+..+............    ....+++|
T Consensus       245 ~Wnvd~~r~~~TLsG--HtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~----~~~~~~Sg  318 (459)
T KOG0288|consen  245 LWNVDSLRLRHTLSG--HTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVC----SISDVISG  318 (459)
T ss_pred             eeeccchhhhhhhcc--cccceeeehhhccccceeeccccchhhhhhhhhhheeccccccccccceEe----cceeeeec
Confidence            999999999999987  999999999988777799999999999999999888777655443332222    26678888


Q ss_pred             ecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCe
Q psy15995        378 SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGEL  457 (683)
Q Consensus       378 ~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~  457 (683)
                      -.|+.|++||.+.. .+......+. .|+++..++++..+.+++.|.++.+.|+++.+....+....             
T Consensus       319 H~DkkvRfwD~Rs~-~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g-------------  383 (459)
T KOG0288|consen  319 HFDKKVRFWDIRSA-DKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEG-------------  383 (459)
T ss_pred             ccccceEEEeccCC-ceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccc-------------
Confidence            89999999999884 4445555544 89999999999999999999999999999877655542100             


Q ss_pred             EEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEE
Q psy15995        458 LYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVA  537 (683)
Q Consensus       458 l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  537 (683)
                                                                                  .......+.+.|||++.|++
T Consensus       384 ------------------------------------------------------------~k~asDwtrvvfSpd~~Yva  403 (459)
T KOG0288|consen  384 ------------------------------------------------------------FKCASDWTRVVFSPDGSYVA  403 (459)
T ss_pred             ------------------------------------------------------------cccccccceeEECCCCceee
Confidence                                                                        00111357789999999999


Q ss_pred             EEcCCCcEEEEEcCCCccCcceeecCCc-CeeEEEECCCCCEEEEEeCCCeEEEE
Q psy15995        538 VGGADSKVHIYELNNKSLSPKAELDHLG-PVTDCSFSPSNEYLVASDAHRKVVLY  591 (683)
Q Consensus       538 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~d~~i~i~  591 (683)
                      +|+.||.|+||++.++++.......+.. .|++++|+|.|..|++++.++.+.+|
T Consensus       404 AGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW  458 (459)
T KOG0288|consen  404 AGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW  458 (459)
T ss_pred             eccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence            9999999999999999988776665555 79999999999999999999999998

>KOG0647|consensus

Probab=99.97  E-value=2e-28  Score=204.21  Aligned_cols=275  Identities=18%  Similarity=0.351  Sum_probs=220.8

Q ss_pred             cccccCeEEEEECCC-CCEEEEEcCCCcEEEEeCCC-CeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECC
Q psy15995        269 QEHSRFVQAVRYSPS-GSHFASAGFDGKVFLYDGAS-ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIE  346 (683)
Q Consensus       269 ~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~  346 (683)
                      ....+.|.+++|||. ..++++++.||+|++|+++. +....... ..|.++|.+++|+.||..+++++.|+.+++||+.
T Consensus        24 ~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~-~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~  102 (347)
T KOG0647|consen   24 NPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQ-QSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLA  102 (347)
T ss_pred             CCcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhh-hccCCCeEEEEEccCCceEEeeccCCceEEEEcc
Confidence            345678999999994 45677899999999999987 34433322 2389999999999999999999999999999999


Q ss_pred             CCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCC--EEEEEeCCC
Q psy15995        347 TKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRG--TVFTGSHDG  424 (683)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg  424 (683)
                      +++..                                             .+..|..+|..+.|-+...  .|++|+.|.
T Consensus       103 S~Q~~---------------------------------------------~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDK  137 (347)
T KOG0647|consen  103 SGQVS---------------------------------------------QVAAHDAPVKTCHWVPGMNYQCLVTGSWDK  137 (347)
T ss_pred             CCCee---------------------------------------------eeeecccceeEEEEecCCCcceeEeccccc
Confidence            88643                                             3456999999999988655  899999999


Q ss_pred             cEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEec
Q psy15995        425 FITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVK  504 (683)
Q Consensus       425 ~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (683)
                      +|+.||++...++....  -..++.++.....+++.+..+..|.++++++....                          
T Consensus       138 TlKfWD~R~~~pv~t~~--LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te--------------------------  189 (347)
T KOG0647|consen  138 TLKFWDTRSSNPVATLQ--LPERVYAADVLYPMAVVATAERHIAVYNLENPPTE--------------------------  189 (347)
T ss_pred             ceeecccCCCCeeeeee--ccceeeehhccCceeEEEecCCcEEEEEcCCCcch--------------------------
Confidence            99999999887766654  56678888888899999999999999999865321                          


Q ss_pred             eEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeec-CC---------cCeeEEEECC
Q psy15995        505 QISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELD-HL---------GPVTDCSFSP  574 (683)
Q Consensus       505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~---------~~v~~~~~s~  574 (683)
                              .+...-+.+..+++++..+|....+.|+-+|.+.+..+..+.....+.+. |.         -+|.+++|+|
T Consensus       190 --------~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP  261 (347)
T KOG0647|consen  190 --------FKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHP  261 (347)
T ss_pred             --------hhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeec
Confidence                    11222345667899999999999999999999999999876333222221 22         2578899999


Q ss_pred             CCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEee
Q psy15995        575 SNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGS  627 (683)
Q Consensus       575 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~  627 (683)
                      ....|++++.||++.+||-+....+...+.  |..+|++.+|+.+|.++|.+.
T Consensus       262 ~hgtlvTaGsDGtf~FWDkdar~kLk~s~~--~~qpItcc~fn~~G~ifaYA~  312 (347)
T KOG0647|consen  262 VHGTLVTAGSDGTFSFWDKDARTKLKTSET--HPQPITCCSFNRNGSIFAYAL  312 (347)
T ss_pred             ccceEEEecCCceEEEecchhhhhhhccCc--CCCccceeEecCCCCEEEEEe
Confidence            999999999999999999887665544333  899999999999999988753

>KOG0289|consensus

Probab=99.97  E-value=1.8e-28  Score=214.63  Aligned_cols=286  Identities=24%  Similarity=0.322  Sum_probs=244.4

Q ss_pred             cCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEe
Q psy15995        230 KPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSE  309 (683)
Q Consensus       230 ~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~  309 (683)
                      ..+.++...|..+ .+++|+.|..+.++|.+..+.+..+.+|...|+.+.++|+...+++++.|-.|++|..........
T Consensus       220 pgi~ald~~~s~~-~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~  298 (506)
T KOG0289|consen  220 PGITALDIIPSSS-KILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTS  298 (506)
T ss_pred             CCeeEEeecCCCC-cceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccc
Confidence            4678888888755 499999999999999999999999999999999999999999999999999999999887776666


Q ss_pred             ccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecC
Q psy15995        310 LGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVN  389 (683)
Q Consensus       310 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~  389 (683)
                      ...  |..+|+.+..+|.|.+|++++.|++..+.|++++..+.....                                 
T Consensus       299 ~~~--h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~---------------------------------  343 (506)
T KOG0289|consen  299 SRP--HEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSD---------------------------------  343 (506)
T ss_pred             ccc--ccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEee---------------------------------
Confidence            654  999999999999999999999999999999999887654321                                 


Q ss_pred             CCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEE
Q psy15995        390 NPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQ  469 (683)
Q Consensus       390 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~  469 (683)
                               ....-.+++.+|+|||..+.+|..||.|++||+.+......+ .+|.+                       
T Consensus       344 ---------~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~F-pght~-----------------------  390 (506)
T KOG0289|consen  344 ---------ETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKF-PGHTG-----------------------  390 (506)
T ss_pred             ---------ccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccC-CCCCC-----------------------
Confidence                     112335889999999999999999999999999988765555 33544                       


Q ss_pred             EeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEE
Q psy15995        470 VDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYE  549 (683)
Q Consensus       470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d  549 (683)
                                                                           +|..++|+.+|-+|+++++|+.|++||
T Consensus       391 -----------------------------------------------------~vk~i~FsENGY~Lat~add~~V~lwD  417 (506)
T KOG0289|consen  391 -----------------------------------------------------PVKAISFSENGYWLATAADDGSVKLWD  417 (506)
T ss_pred             -----------------------------------------------------ceeEEEeccCceEEEEEecCCeEEEEE
Confidence                                                                 456677888899999999999999999


Q ss_pred             cCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecC
Q psy15995        550 LNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLD  629 (683)
Q Consensus       550 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d  629 (683)
                      ++..+..+.+.......+.++.|.+.|.+|+.++.+=+|++++-.+.+......+..|.+..+++.|....+++++++.|
T Consensus       418 LRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd  497 (506)
T KOG0289|consen  418 LRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMD  497 (506)
T ss_pred             ehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccch
Confidence            99888777777766668999999999999999988888888886666555545555588899999999999999999999


Q ss_pred             CcEEEEeC
Q psy15995        630 TTIIIWSL  637 (683)
Q Consensus       630 ~~v~iw~~  637 (683)
                      ..++++.+
T Consensus       498 ~~l~~~a~  505 (506)
T KOG0289|consen  498 AILRLYAL  505 (506)
T ss_pred             hheEEeec
Confidence            99988865

>KOG0641|consensus

Probab=99.97  E-value=3.2e-27  Score=188.39  Aligned_cols=306  Identities=22%  Similarity=0.231  Sum_probs=238.6

Q ss_pred             CcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCC-cccceeeeeecceeeeEeeccceEEEeecC
Q psy15995         83 EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGP-IKDIGTLLSLTSIRNILVLSIGFYIASGDI  161 (683)
Q Consensus        83 ~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  161 (683)
                      ..+..|.+++|.|.|.+.|.|+...+++|-....-..+..-...+...+ +..-....+...|.+.+|+|+|++||+|+.
T Consensus        30 ~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsn  109 (350)
T KOG0641|consen   30 EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSN  109 (350)
T ss_pred             cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCC
Confidence            3678899999999999999999999999876654332221111111111 111122335578999999999999999999


Q ss_pred             CccEEEEecccccee---eeccccccCCCeeEEEEcCC---CCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEE
Q psy15995        162 SGKVRIWDTVNKEHI---LKNEFHPIGGPIKDIAWSPD---NQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSC  235 (683)
Q Consensus       162 d~~i~iwd~~~~~~~---~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  235 (683)
                      |.+|++.-.+...+.   ...++.-|.+.|..++|-.+   +..+++.++.++..+++-+-.+|+....+.+|.+.|.++
T Consensus       110 dk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilal  189 (350)
T KOG0641|consen  110 DKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILAL  189 (350)
T ss_pred             CceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEE
Confidence            999999766543321   23456668899999999754   334444445556667888888999999999999999877


Q ss_pred             EeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc-------cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy15995        236 DFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE-------HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVS  308 (683)
Q Consensus       236 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~  308 (683)
                      - +-++- ++++|+.|.+|++||++-..++..+..       ....|.+++..|.|++|++|-.|....+||++.++.++
T Consensus       190 y-swn~~-m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq  267 (350)
T KOG0641|consen  190 Y-SWNGA-MFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQ  267 (350)
T ss_pred             E-EecCc-EEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceee
Confidence            3 22333 699999999999999987777766532       23679999999999999999999999999999999999


Q ss_pred             eccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEec
Q psy15995        309 ELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDV  388 (683)
Q Consensus       309 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~  388 (683)
                      .+..  |...|.++.|+|...++++++.|..|++-|++.. ...                                    
T Consensus       268 ~f~p--hsadir~vrfsp~a~yllt~syd~~ikltdlqgd-la~------------------------------------  308 (350)
T KOG0641|consen  268 RFHP--HSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGD-LAH------------------------------------  308 (350)
T ss_pred             eeCC--CccceeEEEeCCCceEEEEecccceEEEeecccc-hhh------------------------------------
Confidence            9976  9999999999999999999999999999998743 111                                    


Q ss_pred             CCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        389 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       389 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                         +.++.....|+..+..+.|+|..-.+++.+.|.++.+|-+.
T Consensus       309 ---el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  309 ---ELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             ---cCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence               22334556789999999999999999999999999999764

>KOG0772|consensus

Probab=99.97  E-value=5.7e-29  Score=222.57  Aligned_cols=302  Identities=20%  Similarity=0.313  Sum_probs=228.8

Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee----ee-ccccccCeEEEEECCCCCEEEEEcCCCcE
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK----MT-KQEHSRFVQAVRYSPSGSHFASAGFDGKV  296 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~----~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  296 (683)
                      ...+++|...|.++++.|.|. ++++|+.|.+|++||.......    +. .......|.++.|++.|..|++.+.....
T Consensus       160 Ei~l~hgtk~Vsal~~Dp~Ga-R~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqa  238 (641)
T KOG0772|consen  160 EIQLKHGTKIVSALAVDPSGA-RFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQA  238 (641)
T ss_pred             eEeccCCceEEEEeeecCCCc-eeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcce
Confidence            345778999999999999998 5999999999999997643211    11 12344579999999999999888888899


Q ss_pred             EEEeCCCCeeEEecc----------CCccccCeEEEEEccCC-CEEEEEECCCcEEEEECCCCceeeEEEecCcceeceE
Q psy15995        297 FLYDGASADLVSELG----------NPAHKGGVYAVAWKPDG-TQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQV  365 (683)
Q Consensus       297 ~iw~~~~~~~~~~~~----------~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  365 (683)
                      +++|-...+......          ..+|...+++.+|+|+. ..+++++.||++++||+.+.+........        
T Consensus       239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~--------  310 (641)
T KOG0772|consen  239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKT--------  310 (641)
T ss_pred             eEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEee--------
Confidence            999955444433322          24589999999999954 57899999999999999876532221110        


Q ss_pred             EEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceec--cCC
Q psy15995        366 SCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQ--GAG  443 (683)
Q Consensus       366 ~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~--~~~  443 (683)
                                                    +...+..-+++.++|+||++++|+|+.||.|.+|+..........  ...
T Consensus       311 ------------------------------k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~A  360 (641)
T KOG0772|consen  311 ------------------------------KPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDA  360 (641)
T ss_pred             ------------------------------ccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeec
Confidence                                          111234567899999999999999999999999998543221111  011


Q ss_pred             CCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCC
Q psy15995        444 HGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYE  523 (683)
Q Consensus       444 ~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  523 (683)
                      |.                                                                          ....
T Consensus       361 H~--------------------------------------------------------------------------~g~~  366 (641)
T KOG0772|consen  361 HL--------------------------------------------------------------------------PGQD  366 (641)
T ss_pred             cC--------------------------------------------------------------------------CCCc
Confidence            11                                                                          1126


Q ss_pred             CcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceee--cCCcCeeEEEECCCCCEEEEEe------CCCeEEEEECCC
Q psy15995        524 PSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL--DHLGPVTDCSFSPSNEYLVASD------AHRKVVLYRVPD  595 (683)
Q Consensus       524 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~------~d~~i~i~~~~~  595 (683)
                      |++++||+||++|++-+.|+++++||++..+.......  ...-+-+.++|||+.+++++|.      ..|.+.+||..+
T Consensus       367 Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t  446 (641)
T KOG0772|consen  367 ITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMT  446 (641)
T ss_pred             eeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccc
Confidence            89999999999999999999999999987654333222  2344568899999999999985      457899999999


Q ss_pred             CccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCC
Q psy15995        596 FELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       596 ~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~  638 (683)
                      .+.+....+  ....|..+.|+|.-+.|..|+.||++++|-=.
T Consensus       447 ~d~v~ki~i--~~aSvv~~~WhpkLNQi~~gsgdG~~~vyYdp  487 (641)
T KOG0772|consen  447 LDTVYKIDI--STASVVRCLWHPKLNQIFAGSGDGTAHVYYDP  487 (641)
T ss_pred             eeeEEEecC--CCceEEEEeecchhhheeeecCCCceEEEECc
Confidence            888877666  57789999999998889999999999987533

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=9.6e-28  Score=233.05  Aligned_cols=295  Identities=19%  Similarity=0.209  Sum_probs=219.3

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCc
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTS  221 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~  221 (683)
                      ..++....++|+..+++++.+.....|+...+..+                                    ++..+.|+.
T Consensus        21 ~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v------------------------------------~~~~~~G~~   64 (493)
T PTZ00421         21 LNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAV------------------------------------LKHTDYGKL   64 (493)
T ss_pred             eccccccccCCCCCcEeECCceEEEEEecCCceEE------------------------------------eeccccccC
Confidence            44555566777777777777777777765443211                                    111111221


Q ss_pred             ---eeeeecCCcCeEEEEeec-CCCeEEEEeeCCCeEEEEcCCCC-------ceeeeccccccCeEEEEECCCC-CEEEE
Q psy15995        222 ---VGEISGQSKPINSCDFKP-SRPFRIITGSEDNTIAVFEGPPF-------KFKMTKQEHSRFVQAVRYSPSG-SHFAS  289 (683)
Q Consensus       222 ---~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~  289 (683)
                         ...+.+|.+.|.+++|+| ++. +|++++.|++|++||+.+.       +.+..+.+|...|.+++|+|++ ++|++
T Consensus        65 ~~~~~~l~GH~~~V~~v~fsP~d~~-~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaS  143 (493)
T PTZ00421         65 ASNPPILLGQEGPIIDVAFNPFDPQ-KLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLAS  143 (493)
T ss_pred             CCCCceEeCCCCCEEEEEEcCCCCC-EEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEE
Confidence               234678999999999999 555 5999999999999998765       2456788999999999999986 68999


Q ss_pred             EcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEe
Q psy15995        290 AGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW  369 (683)
Q Consensus       290 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  369 (683)
                      ++.|+.|++||+++++.+..+..  |...|.+++|+|++++|++++.|+.|++||+++++.+..+............+.+
T Consensus       144 gs~DgtVrIWDl~tg~~~~~l~~--h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~  221 (493)
T PTZ00421        144 AGADMVVNVWDVERGKAVEVIKC--HSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAK  221 (493)
T ss_pred             EeCCCEEEEEECCCCeEEEEEcC--CCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcC
Confidence            99999999999999998888765  8999999999999999999999999999999999887776544433334455666


Q ss_pred             cCCEEEEEe----cCCcEEEEecCCCCcceeeeeecc-ccEEEEEEeCCCCEEEEEe-CCCcEEEEcCCCCCcceeccCC
Q psy15995        370 QGDYLLTVS----LSGFISYLDVNNPSTPIRVIKGHN-KPITALALSPDRGTVFTGS-HDGFITRWNAKTGENDRVQGAG  443 (683)
Q Consensus       370 ~~~~l~~~~----~~g~i~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~-~dg~i~~w~~~~~~~~~~~~~~  443 (683)
                      ++..+++++    .++.|++||++....+......+. ..+....|++++++|++++ .|+.|++||+.+++........
T Consensus       222 ~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~  301 (493)
T PTZ00421        222 RKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYS  301 (493)
T ss_pred             CCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeecc
Confidence            777776654    468999999987666665544333 4556667899999999887 5999999999998876655444


Q ss_pred             CCcceeEEEEeCCeEEEEEcCCeEEEEeCCCC
Q psy15995        444 HGNQINGMKATGELLYTCGIDDTIKQVDLSSN  475 (683)
Q Consensus       444 ~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~  475 (683)
                      +...+..+.+...+-+-...-...+++.+...
T Consensus       302 s~~~~~g~~~~pk~~~dv~~~Ei~r~~~l~~~  333 (493)
T PTZ00421        302 SVEPHKGLCMMPKWSLDTRKCEIARFYALTYH  333 (493)
T ss_pred             CCCCCcceEecccccccccceeeeEEEEecCC
Confidence            55566677666544443333444466665543

>KOG0299|consensus

Probab=99.97  E-value=1.4e-28  Score=217.16  Aligned_cols=291  Identities=19%  Similarity=0.264  Sum_probs=221.6

Q ss_pred             cccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccccc-----CCCCcccceeeeeecceeeeEeecc
Q psy15995         78 SDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHP-----IGGPIKDIGTLLSLTSIRNILVLSI  152 (683)
Q Consensus        78 ~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~s~~  152 (683)
                      ...+..|.-+|.|++++||+++.++++.+++|.=|++.+++....+...+     ++.+..... -.+...+.++++|+|
T Consensus       135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r-~~h~keil~~avS~D  213 (479)
T KOG0299|consen  135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESR-KGHVKEILTLAVSSD  213 (479)
T ss_pred             ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCccc-ccccceeEEEEEcCC
Confidence            45677899999999999999999999999999999999987552221111     111111111 134455666677777


Q ss_pred             ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCe
Q psy15995        153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPI  232 (683)
Q Consensus       153 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  232 (683)
                      |+|||+|+.|..|.||+..+.+.                                              +..+.+|.+.|
T Consensus       214 gkylatgg~d~~v~Iw~~~t~eh----------------------------------------------v~~~~ghr~~V  247 (479)
T KOG0299|consen  214 GKYLATGGRDRHVQIWDCDTLEH----------------------------------------------VKVFKGHRGAV  247 (479)
T ss_pred             CcEEEecCCCceEEEecCcccch----------------------------------------------hhcccccccce
Confidence            77777777776666676666553                                              33345566666


Q ss_pred             EEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccC
Q psy15995        233 NSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN  312 (683)
Q Consensus       233 ~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  312 (683)
                      .+++|-.... .+++++.|+.+++|+++....+.++.+|...|..+.....++.+-+|+.|+++++|++.....+ .+. 
T Consensus       248 ~~L~fr~gt~-~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesql-ifr-  324 (479)
T KOG0299|consen  248 SSLAFRKGTS-ELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQL-IFR-  324 (479)
T ss_pred             eeeeeecCcc-ceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccceeEEEecccccee-eee-
Confidence            6666655544 4999999999999999999999999999999999999988888888889999999999544332 232 


Q ss_pred             CccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcc-----------eeceEEEEecCCEEEEEecCC
Q psy15995        313 PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQV-----------EDQQVSCLWQGDYLLTVSLSG  381 (683)
Q Consensus       313 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~~~~~g  381 (683)
                       ++.+.+-|++|-. ...+++|+.+|.|.+|++...+++......+..           -...++..+..+++++|+.+|
T Consensus       325 -g~~~sidcv~~In-~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G  402 (479)
T KOG0299|consen  325 -GGEGSIDCVAFIN-DEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSG  402 (479)
T ss_pred             -CCCCCeeeEEEec-ccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCC
Confidence             3788999999985 457999999999999999999998877665543           234677778999999999999


Q ss_pred             cEEEEecCCCCcceeeeee--ccccEEEEEEeCCCCEEEEE
Q psy15995        382 FISYLDVNNPSTPIRVIKG--HNKPITALALSPDRGTVFTG  420 (683)
Q Consensus       382 ~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~  420 (683)
                      .+++|.+..+...+..+..  -.+-|++++|+++|+.+++|
T Consensus       403 ~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivag  443 (479)
T KOG0299|consen  403 CVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAG  443 (479)
T ss_pred             ceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEe
Confidence            9999999987554444332  56789999999999966655

>KOG0973|consensus

Probab=99.97  E-value=7.8e-29  Score=242.89  Aligned_cols=294  Identities=23%  Similarity=0.342  Sum_probs=232.3

Q ss_pred             CCcCeEEEEeecCCCeEEEEee--CCCeEEEEcCCC------------CceeeeccccccCeEEEEECCCCCEEEEEcCC
Q psy15995        228 QSKPINSCDFKPSRPFRIITGS--EDNTIAVFEGPP------------FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD  293 (683)
Q Consensus       228 ~~~~v~~~~~~~~~~~~l~~~~--~d~~i~iw~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  293 (683)
                      +...|.++..+|++. .+++|+  .|+.+++|+.+.            .+.+.....|.+.|.|+.|+|||++||+|+.|
T Consensus        12 ~~~~IfSIdv~pdg~-~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD   90 (942)
T KOG0973|consen   12 NEKSIFSIDVHPDGV-KFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDD   90 (942)
T ss_pred             CCeeEEEEEecCCce-eEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCc
Confidence            345689999999999 599999  899999997432            23455667899999999999999999999999


Q ss_pred             CcEEEEeCCC------------------CeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEE
Q psy15995        294 GKVFLYDGAS------------------ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       294 g~i~iw~~~~------------------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  355 (683)
                      +.|.+|+...                  .+....+..  |...|..++|+|++.+|++++.|++|.+||..+.+.+    
T Consensus        91 ~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~--H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~----  164 (942)
T KOG0973|consen   91 RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRG--HDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELL----  164 (942)
T ss_pred             ceEEEeeecccCCcccccccccccccceeeEEEEEec--CCCccceeccCCCccEEEEecccceEEEEccccceee----
Confidence            9999998762                  124445544  9999999999999999999999999999999887443    


Q ss_pred             ecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCC
Q psy15995        356 MGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE  435 (683)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~  435 (683)
                                                              ..+.+|.+.|..+.|.|-|+++++-+.|++|++|++.+-.
T Consensus       165 ----------------------------------------~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~  204 (942)
T KOG0973|consen  165 ----------------------------------------KVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWG  204 (942)
T ss_pred             ----------------------------------------eeeecccccccceEECCccCeeeeecCCceEEEEEcccce
Confidence                                                    4568899999999999999999999999999999976644


Q ss_pred             cceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCcee
Q psy15995        436 NDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKV  515 (683)
Q Consensus       436 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  515 (683)
                      .........                                                                       
T Consensus       205 i~k~It~pf-----------------------------------------------------------------------  213 (942)
T KOG0973|consen  205 IEKSITKPF-----------------------------------------------------------------------  213 (942)
T ss_pred             eeEeeccch-----------------------------------------------------------------------
Confidence            333332111                                                                       


Q ss_pred             eeecCCCCCcEEEEccCCCEEEEEcC----CCcEEEEEcCCCccCcceeecCCcCeeEEEECCC-----CC---------
Q psy15995        516 SSLPIDYEPSSISLDHEHGLVAVGGA----DSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPS-----NE---------  577 (683)
Q Consensus       516 ~~~~~~~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~-----~~---------  577 (683)
                      ...+.......+.|+|||.+|++...    -..+.|.+..+-+.. ....+|..+++++.|+|.     .+         
T Consensus       214 ~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~-~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~  292 (942)
T KOG0973|consen  214 EESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVD-KDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNC  292 (942)
T ss_pred             hhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceee-eeeecCCCceEEEEeChHHhccccccCCccCCCc
Confidence            01111223467899999999998754    335778777554433 455689999999999881     12         


Q ss_pred             ---EEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCc
Q psy15995        578 ---YLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPA  641 (683)
Q Consensus       578 ---~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~  641 (683)
                         .+|+|+.|++|.||.....+.+.....- ....|.+|+|+|||..|+.++.||+|.+..++..+
T Consensus       293 ~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~l-f~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~E  358 (942)
T KOG0973|consen  293 YYCIAAVGSQDRSLSVWNTALPRPLFVIHNL-FNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEKE  358 (942)
T ss_pred             ceEEEEEecCCccEEEEecCCCCchhhhhhh-hcCceeeeeEcCCCCeEEEEecCCeEEEEEcchHH
Confidence               6788999999999999776665433222 56789999999999999999999999999987654

>KOG0973|consensus

Probab=99.97  E-value=1e-28  Score=242.07  Aligned_cols=319  Identities=19%  Similarity=0.295  Sum_probs=243.7

Q ss_pred             CcccceEEEEECCCCcEEEEec--CCCCEEEEeCCCcccccccccccCCCCcccc-eeeeeecceeeeEeeccceEEEee
Q psy15995         83 EHSCAVNVAKYSPSGFYIASGD--ISGKVRIWDTVNKEHILKNEFHPIGGPIKDI-GTLLSLTSIRNILVLSIGFYIASG  159 (683)
Q Consensus        83 ~h~~~v~~~~~s~d~~~las~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~  159 (683)
                      .++..|.+++.+|||..+|||+  .|+.++||+.+.--.-....-.   .-...+ +...+...++|+.|+|||++||+|
T Consensus        11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~---~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsG   87 (942)
T KOG0973|consen   11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNE---NLPKHLCTMDDHDGSVNCVRFSPDGSYLASG   87 (942)
T ss_pred             cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhc---ccchhheeeccccCceeEEEECCCCCeEeec
Confidence            3467799999999999999999  8999999997542100000000   000111 223345789999999999999999


Q ss_pred             cCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeec
Q psy15995        160 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKP  239 (683)
Q Consensus       160 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  239 (683)
                      ++|+.|.||+....   .          ...+..+..               ...+.+.-+.+..+.+|...|..++|+|
T Consensus        88 SDD~~v~iW~~~~~---~----------~~~~fgs~g---------------~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp  139 (942)
T KOG0973|consen   88 SDDRLVMIWERAEI---G----------SGTVFGSTG---------------GAKNVESWKVVSILRGHDSDVLDVNWSP  139 (942)
T ss_pred             cCcceEEEeeeccc---C----------Ccccccccc---------------cccccceeeEEEEEecCCCccceeccCC
Confidence            99999999987541   0          000111100               1222334456778899999999999999


Q ss_pred             CCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCc----c
Q psy15995        240 SRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPA----H  315 (683)
Q Consensus       240 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~----~  315 (683)
                      ++.+ +++++.|++|.+|+..+++.+..+.+|...|..+.|.|-|++||+-+.|++|++|++.+....+.+..+.    .
T Consensus       140 ~~~~-lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~  218 (942)
T KOG0973|consen  140 DDSL-LVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPL  218 (942)
T ss_pred             CccE-EEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCC
Confidence            9996 9999999999999999999999999999999999999999999999999999999988776766665532    2


Q ss_pred             ccCeEEEEEccCCCEEEEEECC----CcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCC
Q psy15995        316 KGGVYAVAWKPDGTQLLTASGD----KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP  391 (683)
Q Consensus       316 ~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~  391 (683)
                      ...+..+.|+|||++|++...-    ..+.|.+-.+.                                           
T Consensus       219 ~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tW-------------------------------------------  255 (942)
T KOG0973|consen  219 TTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTW-------------------------------------------  255 (942)
T ss_pred             cceeeecccCCCcCeecchhhccCCcceeEEEecCCc-------------------------------------------
Confidence            3457889999999999987431    22334333222                                           


Q ss_pred             CcceeeeeeccccEEEEEEeCC-----CC------------EEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe
Q psy15995        392 STPIRVIKGHNKPITALALSPD-----RG------------TVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT  454 (683)
Q Consensus       392 ~~~~~~~~~~~~~v~~~~~~~~-----~~------------~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~  454 (683)
                       ..-..+-+|..++.+++|+|.     .+            .+|+|+.|++|.||.....++......-....|..++|+
T Consensus       256 -k~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWs  334 (942)
T KOG0973|consen  256 -KVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWS  334 (942)
T ss_pred             -eeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEc
Confidence             222446789999999999881     11            578999999999999988888877777778899999999


Q ss_pred             --CCeEEEEEcCCeEEEEeCCCCcc
Q psy15995        455 --GELLYTCGIDDTIKQVDLSSNAY  477 (683)
Q Consensus       455 --~~~l~~~~~d~~i~~~~~~~~~~  477 (683)
                        |-.|+.++.||+|.+..++...+
T Consensus       335 pdG~~LfacS~DGtV~~i~Fee~El  359 (942)
T KOG0973|consen  335 PDGFSLFACSLDGTVALIHFEEKEL  359 (942)
T ss_pred             CCCCeEEEEecCCeEEEEEcchHHh
Confidence              88999999999999999886644

>KOG0305|consensus

Probab=99.97  E-value=1.3e-28  Score=228.65  Aligned_cols=280  Identities=22%  Similarity=0.377  Sum_probs=226.1

Q ss_pred             eEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEE
Q psy15995        275 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEF  354 (683)
Q Consensus       275 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  354 (683)
                      ..-+.|+. .+.|++|. ...|++|+..+++.......  +...|+++.|+++|.+|++|..+|.+.|||..+.+.+..+
T Consensus       180 ~nlldWss-~n~laVal-g~~vylW~~~s~~v~~l~~~--~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~  255 (484)
T KOG0305|consen  180 LNLLDWSS-ANVLAVAL-GQSVYLWSASSGSVTELCSF--GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTL  255 (484)
T ss_pred             hhHhhccc-CCeEEEEe-cceEEEEecCCCceEEeEec--CCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccc
Confidence            34467774 44666665 56899999999987666654  4889999999999999999999999999999988888777


Q ss_pred             EecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC
Q psy15995        355 IMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG  434 (683)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~  434 (683)
                      ...+......  ..+++..+.+|+.++.|..+|++........+.+|...|..+.|++|++++|+|+.|+.+.|||....
T Consensus       256 ~~~h~~rvg~--laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~  333 (484)
T KOG0305|consen  256 RGSHASRVGS--LAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP  333 (484)
T ss_pred             cCCcCceeEE--EeccCceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCc
Confidence            6554444444  44569999999999999999999877777778999999999999999999999999999999999555


Q ss_pred             CcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCce
Q psy15995        435 ENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAK  514 (683)
Q Consensus       435 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (683)
                      ++...+ ..|.+.|                                                                  
T Consensus       334 ~p~~~~-~~H~aAV------------------------------------------------------------------  346 (484)
T KOG0305|consen  334 EPKFTF-TEHTAAV------------------------------------------------------------------  346 (484)
T ss_pred             cccEEE-eccceee------------------------------------------------------------------
Confidence            544443 3454444                                                                  


Q ss_pred             eeeecCCCCCcEEEEccC-CCEEEEEc--CCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEE--eCCCeEE
Q psy15995        515 VSSLPIDYEPSSISLDHE-HGLVAVGG--ADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVAS--DAHRKVV  589 (683)
Q Consensus       515 ~~~~~~~~~~~~~~~~~~-~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~d~~i~  589 (683)
                                .+++|+|- ..+||+|+  .|+.|++||..++..+....  ....|..+.|++..+-|+++  ..++.|.
T Consensus       347 ----------KA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd--tgsQVcsL~Wsk~~kEi~sthG~s~n~i~  414 (484)
T KOG0305|consen  347 ----------KALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVD--TGSQVCSLIWSKKYKELLSTHGYSENQIT  414 (484)
T ss_pred             ----------eEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccc--cCCceeeEEEcCCCCEEEEecCCCCCcEE
Confidence                      45555553 34666654  58999999999888774444  66889999999998777764  4677899


Q ss_pred             EEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCc
Q psy15995        590 LYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPA  641 (683)
Q Consensus       590 i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~  641 (683)
                      ||+.++.+.+.  .+.+|...|..+++||||..+++|+.|.++++|++-...
T Consensus       415 lw~~ps~~~~~--~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~~  464 (484)
T KOG0305|consen  415 LWKYPSMKLVA--ELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDER  464 (484)
T ss_pred             EEeccccceee--eecCCcceeEEEEECCCCCEEEEecccCcEEeccccCCC
Confidence            99999976654  444599999999999999999999999999999997753

>KOG1446|consensus

Probab=99.97  E-value=2.9e-27  Score=199.33  Aligned_cols=287  Identities=21%  Similarity=0.287  Sum_probs=244.6

Q ss_pred             ccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeC--CCeEEEEc
Q psy15995        181 FHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSE--DNTIAVFE  258 (683)
Q Consensus       181 ~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d~~i~iw~  258 (683)
                      +....+.|.++.|+++|.++++++.+..  +.+++..+++.++.+..+...+..++|...... ++.++.  |.+|+..+
T Consensus        10 f~~~~~~i~sl~fs~~G~~litss~dDs--l~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~-~i~sStk~d~tIryLs   86 (311)
T KOG1446|consen   10 FRETNGKINSLDFSDDGLLLITSSEDDS--LRLYDSLSGKQVKTINSKKYGVDLACFTHHSNT-VIHSSTKEDDTIRYLS   86 (311)
T ss_pred             cccCCCceeEEEecCCCCEEEEecCCCe--EEEEEcCCCceeeEeecccccccEEEEecCCce-EEEccCCCCCceEEEE
Confidence            3335689999999999999999777654  789999999999999999999999999887775 555555  89999999


Q ss_pred             CCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC
Q psy15995        259 GPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK  338 (683)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  338 (683)
                      +.+.+.++.+.+|...|.+++.+|-++.+++++.|++|++||++..++...+..    ..-..++|.|+|-.+|++....
T Consensus        87 l~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~----~~~pi~AfDp~GLifA~~~~~~  162 (311)
T KOG1446|consen   87 LHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNL----SGRPIAAFDPEGLIFALANGSE  162 (311)
T ss_pred             eecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEec----CCCcceeECCCCcEEEEecCCC
Confidence            999999999999999999999999999999999999999999998888777643    3445678999999999998888


Q ss_pred             cEEEEECCCC--ceeeEEEec--CcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccE---EEEEEe
Q psy15995        339 TCKLWDIETK--SVVSEFIMG--NQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPI---TALALS  411 (683)
Q Consensus       339 ~i~iwd~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v---~~~~~~  411 (683)
                      .|++||++.-  .+-..+...  ...+...+.++++|++++.++..+.+.+.|.-.+. ....+..+...-   ...+|+
T Consensus       163 ~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~-~~~tfs~~~~~~~~~~~a~ft  241 (311)
T KOG1446|consen  163 LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGT-VKSTFSGYPNAGNLPLSATFT  241 (311)
T ss_pred             eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCc-EeeeEeeccCCCCcceeEEEC
Confidence            9999999864  344444433  45667789999999999999999999999988744 555555554332   567899


Q ss_pred             CCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCC
Q psy15995        412 PDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSN  475 (683)
Q Consensus       412 ~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~  475 (683)
                      ||++++++|+.||+|.+|+++++.........+..++.++.|+..+...++.+..+.+|-....
T Consensus       242 Pds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s~l~fw~p~~~  305 (311)
T KOG1446|consen  242 PDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASSNLVFWLPDED  305 (311)
T ss_pred             CCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecCceEEEEecccc
Confidence            9999999999999999999999999988876689999999999999999999999999976643

>KOG0308|consensus

Probab=99.97  E-value=4.6e-29  Score=229.65  Aligned_cols=343  Identities=18%  Similarity=0.289  Sum_probs=268.2

Q ss_pred             ccceEEEeecCCccEEEEecccccee----eeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCC--Cceee
Q psy15995        151 SIGFYIASGDISGKVRIWDTVNKEHI----LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG--TSVGE  224 (683)
Q Consensus       151 ~~~~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~  224 (683)
                      |.++||.+|+.||.|++|+.......    ....+..|...|..++...+++.+++++.+..  +.+|....+  -+..+
T Consensus        35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtT--VK~W~~~~~~~~c~st  112 (735)
T KOG0308|consen   35 PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTT--VKVWNAHKDNTFCMST  112 (735)
T ss_pred             CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCce--EEEeecccCcchhHhh
Confidence            45778999999999999998764332    34567788899999999999999999988754  678888776  57788


Q ss_pred             eecCCcCeEEEEe-ecCCCeEEEEeeCCCeEEEEcCCCCc--eee--------ecc-ccccCeEEEEECCCCCEEEEEcC
Q psy15995        225 ISGQSKPINSCDF-KPSRPFRIITGSEDNTIAVFEGPPFK--FKM--------TKQ-EHSRFVQAVRYSPSGSHFASAGF  292 (683)
Q Consensus       225 ~~~~~~~v~~~~~-~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~--------~~~-~~~~~v~~~~~~~~~~~l~~~~~  292 (683)
                      +..|.+.|.|+++ .++.. ++++|+-|+.|.+||++++.  .+.        .+. ++...|.+++.++.|..+++|+.
T Consensus       113 ir~H~DYVkcla~~ak~~~-lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgt  191 (735)
T KOG0308|consen  113 IRTHKDYVKCLAYIAKNNE-LVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGT  191 (735)
T ss_pred             hhcccchheeeeecccCce-eEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCc
Confidence            9999999999999 55554 69999999999999998762  222        222 78889999999999999999999


Q ss_pred             CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCC
Q psy15995        293 DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD  372 (683)
Q Consensus       293 dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (683)
                      ++.+++||.++++.+..+..  |...|..+..++||..+++++.||+|++||+...+++.+                   
T Consensus       192 ek~lr~wDprt~~kimkLrG--HTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T-------------------  250 (735)
T KOG0308|consen  192 EKDLRLWDPRTCKKIMKLRG--HTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLAT-------------------  250 (735)
T ss_pred             ccceEEeccccccceeeeec--cccceEEEEEcCCCCeEeecCCCceEEeeeccccceeee-------------------
Confidence            99999999999999988875  999999999999999999999999999999998776654                   


Q ss_pred             EEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEE
Q psy15995        373 YLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK  452 (683)
Q Consensus       373 ~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~  452 (683)
                                               +..|...|+++..+|+-..+++|+.||.|..=|+++......+ .....+|..+.
T Consensus       251 -------------------------~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tli-ck~daPv~~l~  304 (735)
T KOG0308|consen  251 -------------------------YIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLI-CKEDAPVLKLH  304 (735)
T ss_pred             -------------------------EEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEe-ecCCCchhhhh
Confidence                                     4568888999999999999999999999999999985332222 33555666666


Q ss_pred             Ee--CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEc
Q psy15995        453 AT--GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLD  530 (683)
Q Consensus       453 ~~--~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  530 (683)
                      ..  .+.+.+++.|+.|+-|.....                                                   ..++
T Consensus       305 ~~~~~~~~WvtTtds~I~rW~~~~~---------------------------------------------------~~l~  333 (735)
T KOG0308|consen  305 LHEHDNSVWVTTTDSSIKRWKLEPD---------------------------------------------------IALS  333 (735)
T ss_pred             hccccCCceeeeccccceecCCccc---------------------------------------------------cccc
Confidence            65  566688899999999976532                                                   2333


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCcc
Q psy15995        531 HEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFEL  598 (683)
Q Consensus       531 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~  598 (683)
                      +.+++.. -+.|.....++...   .+........++...+.-.|.+++++-+..|.+.+||+-....
T Consensus       334 ~s~~~~~-~~T~~~~~~~~~~~---tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl~~~~  397 (735)
T KOG0308|consen  334 VSGDLDF-FSTDSNNHSCDLTN---TPDSVIPGGAAIKKHAMLNDKRHVLTKDAKGNVALWDILACVK  397 (735)
T ss_pred             cCCCCCc-ccccCCCccccccC---CCceeccCchhhhhhhhhcCcceEeeecCCCCEEEEEeeeeee
Confidence            4444433 22333333443322   1122233445667777778999999999999999999865444

>KOG0268|consensus

Probab=99.97  E-value=6.5e-30  Score=218.32  Aligned_cols=290  Identities=19%  Similarity=0.281  Sum_probs=239.2

Q ss_pred             ccccccCcccceEEEEECCCC-cEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE
Q psy15995         77 ISDIYTEHSCAVNVAKYSPSG-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY  155 (683)
Q Consensus        77 ~~~~~~~h~~~v~~~~~s~d~-~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  155 (683)
                      .+..|.||.+.|.|++=.|.. ..+|||+.||.|+|||+.+.++...++.|.              ..|..+++..  ..
T Consensus        58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~--------------G~V~Gi~v~~--~~  121 (433)
T KOG0268|consen   58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHE--------------GLVRGICVTQ--TS  121 (433)
T ss_pred             chhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeeccc--------------CceeeEEecc--cc
Confidence            345678999999999999977 789999999999999999999999998886              6788888887  78


Q ss_pred             EEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEE
Q psy15995        156 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSC  235 (683)
Q Consensus       156 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  235 (683)
                      +++++.|.+|+.|.++.. .+.  .+. ....+..+.-+..+..+++++..    +.+|+.+...++..+.-..+.|.++
T Consensus       122 ~~tvgdDKtvK~wk~~~~-p~~--til-g~s~~~gIdh~~~~~~FaTcGe~----i~IWD~~R~~Pv~smswG~Dti~sv  193 (433)
T KOG0268|consen  122 FFTVGDDKTVKQWKIDGP-PLH--TIL-GKSVYLGIDHHRKNSVFATCGEQ----IDIWDEQRDNPVSSMSWGADSISSV  193 (433)
T ss_pred             eEEecCCcceeeeeccCC-cce--eee-ccccccccccccccccccccCce----eeecccccCCccceeecCCCceeEE
Confidence            889999999999998763 221  111 23556677777777788888776    8999999999999999999999999


Q ss_pred             EeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCe-eEEeccCCc
Q psy15995        236 DFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASAD-LVSELGNPA  314 (683)
Q Consensus       236 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~  314 (683)
                      .|+|....+|+++.+|+.|.+||+++...+..... ...-+.++|+|++-.+++++.|..++.+|++..+ .+.....  
T Consensus       194 kfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~-~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~d--  270 (433)
T KOG0268|consen  194 KFNPVETSILASCASDRSIVLYDLRQASPLKKVIL-TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKD--  270 (433)
T ss_pred             ecCCCcchheeeeccCCceEEEecccCCccceeee-eccccceecCccccceeeccccccceehhhhhhcccchhhcc--
Confidence            99999999899999999999999999887765542 3345679999988889999999999999998764 4444443  


Q ss_pred             cccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcc
Q psy15995        315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTP  394 (683)
Q Consensus       315 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~  394 (683)
                      |...|.++.|+|.|+.+++|+.|.+|+||..+.+.....+                                        
T Consensus       271 hvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiY----------------------------------------  310 (433)
T KOG0268|consen  271 HVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIY----------------------------------------  310 (433)
T ss_pred             cceeEEEeccCCCcchhccccccceEEEeecCCCcchhhh----------------------------------------
Confidence            9999999999999999999999999999998876532111                                        


Q ss_pred             eeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCc
Q psy15995        395 IRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEN  436 (683)
Q Consensus       395 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~  436 (683)
                       .  ...-..|.|+.|+-|.+++++|+.|+.|++|.....+.
T Consensus       311 -h--tkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asek  349 (433)
T KOG0268|consen  311 -H--TKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEK  349 (433)
T ss_pred             -h--HhhhheeeEEEEeccccEEEecCCCcceeeeecchhhh
Confidence             0  01123589999999999999999999999998765544

>KOG1274|consensus

Probab=99.97  E-value=1.6e-25  Score=215.14  Aligned_cols=279  Identities=15%  Similarity=0.242  Sum_probs=221.3

Q ss_pred             cCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCc-ccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec
Q psy15995         82 TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNK-EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD  160 (683)
Q Consensus        82 ~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  160 (683)
                      ..|+..-+.++|.|+|.+|.+++.||.|++|+.... +....+..+.              ..+.  .+..++.+|++++
T Consensus        10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g--------------~~v~--~ia~~s~~f~~~s   73 (933)
T KOG1274|consen   10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISG--------------ELVS--SIACYSNHFLTGS   73 (933)
T ss_pred             hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccC--------------ceeE--EEeecccceEEee
Confidence            368999999999999999999999999999998776 3322222111              3333  3444566999999


Q ss_pred             CCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecC
Q psy15995        161 ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPS  240 (683)
Q Consensus       161 ~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  240 (683)
                      .+++|.+|...+++.-  ..+....-++..++|+.+|++++.++++..  +.+...........+.+|..+|.++.|+|+
T Consensus        74 ~~~tv~~y~fps~~~~--~iL~Rftlp~r~~~v~g~g~~iaagsdD~~--vK~~~~~D~s~~~~lrgh~apVl~l~~~p~  149 (933)
T KOG1274|consen   74 EQNTVLRYKFPSGEED--TILARFTLPIRDLAVSGSGKMIAAGSDDTA--VKLLNLDDSSQEKVLRGHDAPVLQLSYDPK  149 (933)
T ss_pred             ccceEEEeeCCCCCcc--ceeeeeeccceEEEEecCCcEEEeecCcee--EEEEeccccchheeecccCCceeeeeEcCC
Confidence            9999999999887632  122233478999999999999999887754  678888889999999999999999999999


Q ss_pred             CCeEEEEeeCCCeEEEEcCCCCceeeeccc--------cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccC
Q psy15995        241 RPFRIITGSEDNTIAVFEGPPFKFKMTKQE--------HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN  312 (683)
Q Consensus       241 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  312 (683)
                      +.+ |++.+.||.|++|+++++.....+.+        ....+..++|+|++..++..+.|+.|++|+..+.+....+..
T Consensus       150 ~~f-LAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~  228 (933)
T KOG1274|consen  150 GNF-LAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRD  228 (933)
T ss_pred             CCE-EEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecc
Confidence            996 99999999999999999887776643        145577899999988888888899999999999999988887


Q ss_pred             CccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEE
Q psy15995        313 PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYL  386 (683)
Q Consensus       313 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~  386 (683)
                      ..+...+..++|+|+|++|++++.+|.|.|||.++...     ......+.+.++.|+.+.+-.....|...++
T Consensus       229 ~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~-----~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~~  297 (933)
T KOG1274|consen  229 KLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHER-----HEFKRAVCCEAWKPNANAITLITALGTLGVS  297 (933)
T ss_pred             cccccceEEEEEcCCCcEEeeeccCCcEEEEecccchh-----ccccceeEEEecCCCCCeeEEEeeccccccC
Confidence            76777799999999999999999999999999997322     2223344555566666666555555544333

>KOG0308|consensus

Probab=99.97  E-value=7.6e-29  Score=228.23  Aligned_cols=348  Identities=18%  Similarity=0.244  Sum_probs=266.3

Q ss_pred             CCCCeEEEe-cCCeEEEEeCCCCc------ccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCc--ccccccc
Q psy15995         54 PKGKNFLYT-NGNSVIIRNIENPA------ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNK--EHILKNE  124 (683)
Q Consensus        54 ~~~~~l~~~-~~~~i~v~~~~~~~------~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~--~~~~~~~  124 (683)
                      |.+++|+++ .||.|++|+...-.      .+..++.|.+.|+.++..-+|+.|+++|.|-+|++|+...+  -++..+.
T Consensus        35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir  114 (735)
T KOG0308|consen   35 PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIR  114 (735)
T ss_pred             CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhh
Confidence            566667766 68999999986432      36678899999999999999999999999999999999887  4555555


Q ss_pred             cccCCCCcccceeeeeecceeeeEe-eccceEEEeecCCccEEEEeccccce--e------eecccc-ccCCCeeEEEEc
Q psy15995        125 FHPIGGPIKDIGTLLSLTSIRNILV-LSIGFYIASGDISGKVRIWDTVNKEH--I------LKNEFH-PIGGPIKDIAWS  194 (683)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~~~d~~i~iwd~~~~~~--~------~~~~~~-~~~~~i~~~~~s  194 (683)
                      .|.              .-|.++++ .++...+|+|+-|+.|.+||++++..  +      ....+. ++..+|++++.+
T Consensus       115 ~H~--------------DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N  180 (735)
T KOG0308|consen  115 THK--------------DYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMN  180 (735)
T ss_pred             ccc--------------chheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecC
Confidence            555              78999999 88999999999999999999998732  1      111222 566789999999


Q ss_pred             CCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccC
Q psy15995        195 PDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF  274 (683)
Q Consensus       195 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~  274 (683)
                      +.|..++.++..+.  +++|+..+++.+..+.+|...|..+..+++|. ++++++.||+|++||+...+++.++..|...
T Consensus       181 ~t~t~ivsGgtek~--lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt-~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~  257 (735)
T KOG0308|consen  181 QTGTIIVSGGTEKD--LRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGT-RLLSASSDGTIRLWDLGQQRCLATYIVHKEG  257 (735)
T ss_pred             CcceEEEecCcccc--eEEeccccccceeeeeccccceEEEEEcCCCC-eEeecCCCceEEeeeccccceeeeEEeccCc
Confidence            99977766665544  89999999999999999999999999999999 5999999999999999999999999999999


Q ss_pred             eEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEE
Q psy15995        275 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEF  354 (683)
Q Consensus       275 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  354 (683)
                      |+++..+|+-..+++|+.||.|..=|+++......+-.  ...+|..+..+...+-+-+++.|+.|+-|..+-...+   
T Consensus       258 VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick--~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l---  332 (735)
T KOG0308|consen  258 VWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICK--EDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIAL---  332 (735)
T ss_pred             eEEEeeCCCcceEEecCCCCcEEecccCCchhheEeec--CCCchhhhhhccccCCceeeeccccceecCCcccccc---
Confidence            99999999999999999999999999998543333332  5667888888765566678888999999976533211   


Q ss_pred             EecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC
Q psy15995        355 IMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG  434 (683)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~  434 (683)
                                   ...++... -+.+......+...  .+...+.| ...+...+.-.|.+++++-...|.+.+||+-..
T Consensus       333 -------------~~s~~~~~-~~T~~~~~~~~~~~--tp~~vi~G-g~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl~~  395 (735)
T KOG0308|consen  333 -------------SVSGDLDF-FSTDSNNHSCDLTN--TPDSVIPG-GAAIKKHAMLNDKRHVLTKDAKGNVALWDILAC  395 (735)
T ss_pred             -------------ccCCCCCc-ccccCCCccccccC--CCceeccC-chhhhhhhhhcCcceEeeecCCCCEEEEEeeee
Confidence                         11111111 11122222222211  11122222 223455556678899999999999999998776


Q ss_pred             Ccceec
Q psy15995        435 ENDRVQ  440 (683)
Q Consensus       435 ~~~~~~  440 (683)
                      .....+
T Consensus       396 ~~~~d~  401 (735)
T KOG0308|consen  396 VKVEDF  401 (735)
T ss_pred             eehhhc
Confidence            554443

>KOG2096|consensus

Probab=99.97  E-value=5.8e-28  Score=202.82  Aligned_cols=317  Identities=15%  Similarity=0.203  Sum_probs=223.9

Q ss_pred             EEEEeCCCCcc-----cccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeee
Q psy15995         67 VIIRNIENPAI-----SDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSL  141 (683)
Q Consensus        67 i~v~~~~~~~~-----~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (683)
                      ..-|+.+....     ...|++|.+.|++++||.||++|||++.|++|+||++..-+..    .|.      .+......
T Consensus        63 ~~~~k~~q~~f~Hpl~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~----eHr------~~R~nve~  132 (420)
T KOG2096|consen   63 NDQWKAKQPTFVHPLNVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENK----EHR------CIRQNVEY  132 (420)
T ss_pred             hhhhcccCCCcccchhhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhh----hhh------HhhccccC
Confidence            44455544432     3458899999999999999999999999999999999763211    111      11111112


Q ss_pred             cceeeeEeeccceEEEeec-CCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC
Q psy15995        142 TSIRNILVLSIGFYIASGD-ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT  220 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~  220 (683)
                      ...+.++|+||.+.++... ...++++|.+...+.   -     ..+...+-+..                         
T Consensus       133 dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~d---G-----~~~~~~v~~D~-------------------------  179 (420)
T KOG2096|consen  133 DHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTD---G-----SGSHHFVHIDN-------------------------  179 (420)
T ss_pred             CCceEEEECCCcceEEEEEccCCEEEEEEeeeccc---C-----CCCcccccccc-------------------------
Confidence            4567889999988665544 445688887654331   0     01111111100                         


Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEe
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD  300 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  300 (683)
                       ..--+.|.-.+..+-...++.+ +++++.|..|.+|++. ++.+..+......-...+.||+|+++++++....|++|.
T Consensus       180 -~~f~~kh~v~~i~iGiA~~~k~-imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE  256 (420)
T KOG2096|consen  180 -LEFERKHQVDIINIGIAGNAKY-IMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWE  256 (420)
T ss_pred             -cccchhcccceEEEeecCCceE-EEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEE
Confidence             0011234555556666666775 9999999999999998 888888877777778899999999999999999999997


Q ss_pred             CC---CC---eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCC-------ceeeEE---EecCcceece
Q psy15995        301 GA---SA---DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETK-------SVVSEF---IMGNQVEDQQ  364 (683)
Q Consensus       301 ~~---~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~---~~~~~~~~~~  364 (683)
                      +-   .|   +..+.+...+|...|..++|+++...+++.+.||.+++||+.-.       +.+.+.   ..........
T Consensus       257 ~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~R  336 (420)
T KOG2096|consen  257 PIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVR  336 (420)
T ss_pred             EEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceE
Confidence            53   22   33445555669999999999999999999999999999998532       222222   1223344557


Q ss_pred             EEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcC
Q psy15995        365 VSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNA  431 (683)
Q Consensus       365 ~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~  431 (683)
                      +..+|+++.+++. ....+.+|..+.+...-..-..|...|.+++|+++|+++++++ |..++++.-
T Consensus       337 L~lsP~g~~lA~s-~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~n  401 (420)
T KOG2096|consen  337 LELSPSGDSLAVS-FGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIRN  401 (420)
T ss_pred             EEeCCCCcEEEee-cCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeecC
Confidence            8888888877654 4567888888875554444567999999999999999999986 667777753

>KOG1445|consensus

Probab=99.97  E-value=1.1e-27  Score=219.88  Aligned_cols=457  Identities=18%  Similarity=0.284  Sum_probs=290.2

Q ss_pred             CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee------eeccccccCeEEEEECCCCCEEEEEcCC
Q psy15995        220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK------MTKQEHSRFVQAVRYSPSGSHFASAGFD  293 (683)
Q Consensus       220 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~d  293 (683)
                      +.+..+.+|.+.|+.+.|+|-...+|++++.|..|+||.+..+...      ..+.+....+.++.|+|...-|+..+..
T Consensus        70 r~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~  149 (1012)
T KOG1445|consen   70 RDIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAH  149 (1012)
T ss_pred             cccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccC
Confidence            3566788999999999999988888999999999999998743221      1223344578899999977656666668


Q ss_pred             CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCC-ceeeEEEecCcceeceEEEEecCC
Q psy15995        294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETK-SVVSEFIMGNQVEDQQVSCLWQGD  372 (683)
Q Consensus       294 g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  372 (683)
                      |++++||+.+++.+..+..  |...|.++.|+.||+.|++.+.|..|+|||.+.. +.++............+.+..+-.
T Consensus       150 g~v~i~D~stqk~~~el~~--h~d~vQSa~WseDG~llatscKdkqirifDPRa~~~piQ~te~H~~~rdsRv~w~Gn~~  227 (1012)
T KOG1445|consen  150 GSVYITDISTQKTAVELSG--HTDKVQSADWSEDGKLLATSCKDKQIRIFDPRASMEPIQTTEGHGGMRDSRVLWAGNWE  227 (1012)
T ss_pred             ceEEEEEcccCceeecccC--CchhhhccccccCCceEeeecCCcceEEeCCccCCCccccccccccchhheeeeccchh
Confidence            9999999999999988876  9999999999999999999999999999999864 455555444444444555544444


Q ss_pred             EEEEEecC----CcEEEEecCCCCcceeeeeec-cccEEEEEEeCCCCEEEE-EeCCCcEEEEcCCCCCcceeccCCCCc
Q psy15995        373 YLLTVSLS----GFISYLDVNNPSTPIRVIKGH-NKPITALALSPDRGTVFT-GSHDGFITRWNAKTGENDRVQGAGHGN  446 (683)
Q Consensus       373 ~l~~~~~~----g~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~-~~~dg~i~~w~~~~~~~~~~~~~~~~~  446 (683)
                      .+++.+.+    ..+++||.+.-..++.++.-. ...|.---|.||.++|+. |-.+..+..+.+...+........+..
T Consensus       228 rlisTGF~~~R~reV~~~Dtr~f~~p~~tleld~stGvLiPl~DpDt~llfLaGKG~~~l~~lE~~d~qPyLs~v~~~tl  307 (1012)
T KOG1445|consen  228 RLISTGFTTKRIREVRAYDTRKFGAPVHTLELDSSTGVLIPLYDPDTRLLFLAGKGTNKLFMLEMQDRQPYLSHVFELTL  307 (1012)
T ss_pred             hhhhcccchhhheeeeeeeccccCCcceeEEeecccceEeeeecCCCceEEEecCCcceEEEEEecCCCcchhhhhhhcc
Confidence            66655544    478999999877777766532 334555568898887764 445778888887765543221111110


Q ss_pred             ce----------eEEEEe---CCeEEEEEcCCeEE-------------------------------EEeCCCCcccCCce
Q psy15995        447 QI----------NGMKAT---GELLYTCGIDDTIK-------------------------------QVDLSSNAYSGPEV  482 (683)
Q Consensus       447 ~v----------~~~~~~---~~~l~~~~~d~~i~-------------------------------~~~~~~~~~~~~~~  482 (683)
                      .-          ..+...   -+.++--+....|-                               -|=-.++... ...
T Consensus       308 e~~~~GA~lvpkral~VM~~EV~rvlQLt~~~ivPi~y~VPRksyrdFH~DLfPeT~G~~p~~~ageWlnG~Nq~v-qKv  386 (1012)
T KOG1445|consen  308 EEQTLGATLVPKRALHVMDGEVDRVLQLTKSSIVPIPYIVPRKSYRDFHSDLFPETRGAEPGCTAGEWLNGTNQVV-QKV  386 (1012)
T ss_pred             hhhhccceecchhhhhhcchhhhhheecccCceeecccccchhhhhhhhhhhCccccCCccCcCccceecCccccc-ccc
Confidence            00          000000   00000000000000                               0111111111 111


Q ss_pred             ecCCCCcee--------e---------e--------cC--------------C----eEE-------------EEE----
Q psy15995        483 KLGSQPRGL--------D---------I--------DE--------------N----TLV-------------TVT----  502 (683)
Q Consensus       483 ~~~~~~~~~--------~---------~--------~~--------------~----~~~-------------~~~----  502 (683)
                      .+....+..        .         +        .+              +    ..+             ...    
T Consensus       387 Sl~Pa~r~h~~~pp~~~P~p~~a~t~sf~~v~~ppaaP~~~~n~~~~~~~~Pd~~~qpaV~~~~e~r~l~~~~~E~~~g~  466 (1012)
T KOG1445|consen  387 SLAPAQRSHSPPPPEPVPTPKVAQTPSFVPVPTPPAAPRPMSNNNSSSNNVPDVQEQPAVPKKEEVRELDYRPYEKENGV  466 (1012)
T ss_pred             ccCchhccCCCCCCCCCCCcccccCCCCccccCCCCCCCccccccccccCCCccccCCCcCcchhhhhhcccccccccCc
Confidence            110000000        0         0        00              0    000             000    


Q ss_pred             ---------------------eceEEEEeCCc-ee-------e--------eec----CC--------------------
Q psy15995        503 ---------------------VKQISIVENGA-KV-------S--------SLP----ID--------------------  521 (683)
Q Consensus       503 ---------------------~~~~~~~~~~~-~~-------~--------~~~----~~--------------------  521 (683)
                                           .+...+..... ..       .        ..+    ..                    
T Consensus       467 ~~~~~dad~~~g~sS~~s~~~~~~~~~~kP~S~plt~~~s~~s~~~P~~~ksvPe~~~~~~g~~~sat~~v~~s~s~r~~  546 (1012)
T KOG1445|consen  467 HTPNADADSTQGNSSPISTISPEPVTIVKPASTPLTDSVSTPSVVGPAFGKSVPEQPPVNFGKPISATNRVPLSQSVRPK  546 (1012)
T ss_pred             cCCCcccccccCCCCCccccCCCcccccCCCCcccccccccccccCccccccCCCCCCcccCCCcccccccccccccccc
Confidence                                 00000000000 00       0        000    00                    


Q ss_pred             ---------------------------------CCCcEEEEccCCCEEEE--EcCCCcEEEEEcCCCccCcceeec---C
Q psy15995        522 ---------------------------------YEPSSISLDHEHGLVAV--GGADSKVHIYELNNKSLSPKAELD---H  563 (683)
Q Consensus       522 ---------------------------------~~~~~~~~~~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~---~  563 (683)
                                                       .+..+=-|+.+...+|+  .+..|.|.||++.....++.-.+.   .
T Consensus       547 s~v~G~iSKFRH~~Gt~ghks~hi~NLrnln~~~PgEsnGfcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~N  626 (1012)
T KOG1445|consen  547 SCVVGQISKFRHVDGTQGHKSAHISNLRNLNTRLPGESNGFCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFN  626 (1012)
T ss_pred             ceeeccchheeeccCccccchhhhhhhhcccccCCCccCceeeccceEEEEecCCCceEEEEEcCCCCCCCccccccccc
Confidence                                             00000111122334443  355688999999765444333222   5


Q ss_pred             CcCeeEEEECC-CCCEEEEEeCCCeEEEEECCCCcc-----ccccceeeecccEEEEEecC-CCCeEEEeecCCcEEEEe
Q psy15995        564 LGPVTDCSFSP-SNEYLVASDAHRKVVLYRVPDFEL-----AHNKEWGFHSAKVNCVAWSP-DSALVASGSLDTTIIIWS  636 (683)
Q Consensus       564 ~~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~-----~~~~~~~~h~~~v~~~~~s~-d~~~l~~~~~d~~v~iw~  636 (683)
                      ...|+.+.|.| |.+.||++++||.|++|.+..+.+     .....+.+|...|+++.|+| -...|++++.|.+|++||
T Consensus       627 gt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWD  706 (1012)
T KOG1445|consen  627 GTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWD  706 (1012)
T ss_pred             CceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeee
Confidence            67799999999 889999999999999999986433     22344556999999999999 356899999999999999


Q ss_pred             CCCCceeeEeecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEeec
Q psy15995        637 LASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       637 ~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~~  681 (683)
                      +.+.+....+.+  |.+.|.+++|+ +++++++.+.||+|+||+-.
T Consensus       707 l~~~~~~~~l~g--HtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Pr  750 (1012)
T KOG1445|consen  707 LANAKLYSRLVG--HTDQIFGIAWSPDGRRIATVCKDGTLRVYEPR  750 (1012)
T ss_pred             hhhhhhhheecc--CcCceeEEEECCCCcceeeeecCceEEEeCCC
Confidence            999999999876  89999999999 88999999999999999753

>KOG0277|consensus

Probab=99.97  E-value=2.1e-28  Score=198.77  Aligned_cols=283  Identities=19%  Similarity=0.267  Sum_probs=228.6

Q ss_pred             eeeEeecc-ceEEEee-------cCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCe-EEEEecCCceEEEEEE
Q psy15995        145 RNILVLSI-GFYIASG-------DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQR-MVVVGEGRERFGHVFM  215 (683)
Q Consensus       145 ~~~~~s~~-~~~l~~~-------~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~~~~~~~~~~~~  215 (683)
                      -++.|||- ..+||++       ...|.+.|-++...+.+....--.-...+..++|++.... ++++++++.  .++|+
T Consensus        12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGS--Lrl~d   89 (311)
T KOG0277|consen   12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGS--LRLFD   89 (311)
T ss_pred             ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCce--EEEec
Confidence            35667773 2344432       2368899999975554444443334578999999997544 444444432  56666


Q ss_pred             cc-CCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCC-CCEEEEEcCC
Q psy15995        216 SE-TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPS-GSHFASAGFD  293 (683)
Q Consensus       216 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d  293 (683)
                      .. ...++..++.|...|.++.|++..+..+++++.|++|++|+....+.+.++.+|...|...+|+|. .+.+++++.|
T Consensus        90 ~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd  169 (311)
T KOG0277|consen   90 LTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGD  169 (311)
T ss_pred             cCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCC
Confidence            43 356888999999999999999988888999999999999999999999999999999999999995 5689999999


Q ss_pred             CcEEEEeCCCCeeEEeccCCccccCeEEEEEcc-CCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEe-cC
Q psy15995        294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKP-DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW-QG  371 (683)
Q Consensus       294 g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~  371 (683)
                      +.+++||++.......+.  .|...|.++.|+. +...+++++.|+.|+.||+++.+.......++......+.++| ..
T Consensus       170 ~~l~lwdvr~~gk~~~i~--ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~  247 (311)
T KOG0277|consen  170 GTLRLWDVRSPGKFMSIE--AHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHA  247 (311)
T ss_pred             ceEEEEEecCCCceeEEE--eccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchh
Confidence            999999998754444454  4999999999988 6778999999999999999986644333467778888888888 46


Q ss_pred             CEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeC-CCCEEEEEeCCCcEEEEcC
Q psy15995        372 DYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSP-DRGTVFTGSHDGFITRWNA  431 (683)
Q Consensus       372 ~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~w~~  431 (683)
                      ..|++++.|-++++||...+...+.+...|..-+..+.|++ +..++|+++.|+.+++|+.
T Consensus       248 ~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  248 SLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             hHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            78889999999999999988888888889999999999998 6689999999999999984

>KOG0300|consensus

Probab=99.97  E-value=2.1e-28  Score=205.40  Aligned_cols=294  Identities=22%  Similarity=0.343  Sum_probs=240.4

Q ss_pred             CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEE
Q psy15995        220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLY  299 (683)
Q Consensus       220 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  299 (683)
                      ..++++.+|.+.|+.++.....+ .+.+++.|.+.+||.+++++++..+.+|.+.|++++|++.+.++++++.|++-.||
T Consensus       139 ~lvre~~GHkDGiW~Vaa~~tqp-i~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW  217 (481)
T KOG0300|consen  139 RLVRELEGHKDGIWHVAADSTQP-ICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIW  217 (481)
T ss_pred             eehhhhcccccceeeehhhcCCc-ceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHH
Confidence            34567889999999999988888 59999999999999999999999999999999999999999999999999999999


Q ss_pred             eC------CCC----------------------------------eeEEeccCCccccCeEEEEEccCCCEEEEEECCCc
Q psy15995        300 DG------ASA----------------------------------DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKT  339 (683)
Q Consensus       300 ~~------~~~----------------------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  339 (683)
                      ..      ...                                  .++..+  .+|.+.|.+..|...++.+++++.|.+
T Consensus       218 ~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~l--tgH~~vV~a~dWL~gg~Q~vTaSWDRT  295 (481)
T KOG0300|consen  218 KAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRL--TGHRAVVSACDWLAGGQQMVTASWDRT  295 (481)
T ss_pred             HHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeee--eccccceEehhhhcCcceeeeeecccc
Confidence            52      110                                  011112  236666666667666777777777777


Q ss_pred             EEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEE
Q psy15995        340 CKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFT  419 (683)
Q Consensus       340 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  419 (683)
                      -.+||.+++..+                                            ..+.+|..+.+.++-+|..+++++
T Consensus       296 AnlwDVEtge~v--------------------------------------------~~LtGHd~ELtHcstHptQrLVvT  331 (481)
T KOG0300|consen  296 ANLWDVETGEVV--------------------------------------------NILTGHDSELTHCSTHPTQRLVVT  331 (481)
T ss_pred             ceeeeeccCcee--------------------------------------------ccccCcchhccccccCCcceEEEE
Confidence            777777766554                                            456889999999999999999999


Q ss_pred             EeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe-CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeE
Q psy15995        420 GSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT-GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTL  498 (683)
Q Consensus       420 ~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (683)
                      .+.|.+.++||++..-......++|...|++..|. ++.+++++.|.++++||+++..                      
T Consensus       332 sSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMR----------------------  389 (481)
T KOG0300|consen  332 SSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMR----------------------  389 (481)
T ss_pred             eccCceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeecccc----------------------
Confidence            99999999999996655555568999999999999 9999999999999999998763                      


Q ss_pred             EEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcce---eecCCcCeeEEEECCC
Q psy15995        499 VTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKA---ELDHLGPVTDCSFSPS  575 (683)
Q Consensus       499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~~v~~~~~s~~  575 (683)
                                    .++..+....++..++++..+.+++.-.++..|++||+...++....   ..+|...|+|++|..+
T Consensus       390 --------------splATIRtdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~ee  455 (481)
T KOG0300|consen  390 --------------SPLATIRTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEE  455 (481)
T ss_pred             --------------CcceeeecCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeecccc
Confidence                          34445556677889999999999999999999999999987665333   2358889999999764


Q ss_pred             C--CEEEEEeCCCeEEEEECCCC
Q psy15995        576 N--EYLVASDAHRKVVLYRVPDF  596 (683)
Q Consensus       576 ~--~~l~~~~~d~~i~i~~~~~~  596 (683)
                      .  .-|++++-|..+.=|.+...
T Consensus       456 hp~cnLftcGFDR~v~gW~in~p  478 (481)
T KOG0300|consen  456 HPACNLFTCGFDRMVAGWKINTP  478 (481)
T ss_pred             CcccccccccccceeeeeEeccc
Confidence            3  35778889999999988653

>PTZ00421 coronin; Provisional

Probab=99.96  E-value=1.6e-27  Score=231.42  Aligned_cols=230  Identities=12%  Similarity=0.203  Sum_probs=173.0

Q ss_pred             CeEEEEeCCCCcccc---cccCcccceEEEEECC-CCcEEEEecCCCCEEEEeCCCccc-------ccccccccCCCCcc
Q psy15995         65 NSVIIRNIENPAISD---IYTEHSCAVNVAKYSP-SGFYIASGDISGKVRIWDTVNKEH-------ILKNEFHPIGGPIK  133 (683)
Q Consensus        65 ~~i~v~~~~~~~~~~---~~~~h~~~v~~~~~s~-d~~~las~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~  133 (683)
                      +...++..+.++...   .+.+|.+.|++++|+| ++++||+|+.|++|++||+.++..       +..+..|       
T Consensus        52 g~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH-------  124 (493)
T PTZ00421         52 STAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGH-------  124 (493)
T ss_pred             ceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCC-------
Confidence            333344444444332   4789999999999999 889999999999999999986532       2222223       


Q ss_pred             cceeeeeecceeeeEeeccc-eEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEE
Q psy15995        134 DIGTLLSLTSIRNILVLSIG-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH  212 (683)
Q Consensus       134 ~~~~~~~~~~i~~~~~s~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~  212 (683)
                             ...|.+++|+|++ .+|++++.|++|+|||+.+++.+.                                   
T Consensus       125 -------~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~-----------------------------------  162 (493)
T PTZ00421        125 -------TKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVE-----------------------------------  162 (493)
T ss_pred             -------CCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEE-----------------------------------
Confidence                   2679999999986 699999999999999997754221                                   


Q ss_pred             EEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccC-eEEEEECCCCCEEEEEc
Q psy15995        213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF-VQAVRYSPSGSHFASAG  291 (683)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~  291 (683)
                                 .+.+|...|.+++|+|++.. |++++.|+.|++||.++++.+..+.+|... +..+.|.+++..+++++
T Consensus       163 -----------~l~~h~~~V~sla~spdG~l-Latgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G  230 (493)
T PTZ00421        163 -----------VIKCHSDQITSLEWNLDGSL-LCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLG  230 (493)
T ss_pred             -----------EEcCCCCceEEEEEECCCCE-EEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEe
Confidence                       12345566777777777774 999999999999999999998888888764 45678999888777654


Q ss_pred             ----CCCcEEEEeCCCCee-EEeccCCccccCeEEEEEccCCCEEEEEE-CCCcEEEEECCCCceeeEEEe
Q psy15995        292 ----FDGKVFLYDGASADL-VSELGNPAHKGGVYAVAWKPDGTQLLTAS-GDKTCKLWDIETKSVVSEFIM  356 (683)
Q Consensus       292 ----~dg~i~iw~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~  356 (683)
                          .|+.|++||+++... ...... .....+....|++++++|++++ .|+.|++||+.+++.......
T Consensus       231 ~s~s~Dr~VklWDlr~~~~p~~~~~~-d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~  300 (493)
T PTZ00421        231 CSKSQQRQIMLWDTRKMASPYSTVDL-DQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSY  300 (493)
T ss_pred             cCCCCCCeEEEEeCCCCCCceeEecc-CCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeec
Confidence                478999999987543 332221 1334566678899999999887 499999999998887655433

>KOG0274|consensus

Probab=99.96  E-value=7e-28  Score=233.82  Aligned_cols=280  Identities=22%  Similarity=0.320  Sum_probs=240.2

Q ss_pred             CCeEEEeeCCCCCeEEEecCCeEEEEeCCCCccccc-ccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccc
Q psy15995         45 GQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDI-YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKN  123 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~-~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~  123 (683)
                      ..+++..+. ++..+....+..|.+||..++..+.. +.||.+.|.+++|..-+.+|++|+.|.++++||..++++...+
T Consensus       209 ~~~~~~q~~-~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l  287 (537)
T KOG0274|consen  209 HVVLCLQLH-DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSL  287 (537)
T ss_pred             chhhhheee-cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEe
Confidence            355666667 55555555778899999999998888 9999999999999987889999999999999999999999999


Q ss_pred             ccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEE
Q psy15995        124 EFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV  203 (683)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  203 (683)
                      .+|.              ..+.++.  -...++++|+.|.+|++|+++++..+...  .+|.++|.++..+  +.+++++
T Consensus       288 ~gh~--------------stv~~~~--~~~~~~~sgs~D~tVkVW~v~n~~~l~l~--~~h~~~V~~v~~~--~~~lvsg  347 (537)
T KOG0274|consen  288 QGHT--------------SSVRCLT--IDPFLLVSGSRDNTVKVWDVTNGACLNLL--RGHTGPVNCVQLD--EPLLVSG  347 (537)
T ss_pred             cCCC--------------ceEEEEE--ccCceEeeccCCceEEEEeccCcceEEEe--ccccccEEEEEec--CCEEEEE
Confidence            8876              4555543  34567888999999999999998866443  4488999999998  7788888


Q ss_pred             ecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC-ceeeeccccccCeEEEEECC
Q psy15995        204 GEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF-KFKMTKQEHSRFVQAVRYSP  282 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~  282 (683)
                      +.+.  .+.+|+..+++++..+.+|...|.++.+.+. + .+++|+.|++|++||+.+. +++..+.+|..-+..+.+  
T Consensus       348 s~d~--~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~-~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~--  421 (537)
T KOG0274|consen  348 SYDG--TVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-N-RLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL--  421 (537)
T ss_pred             ecCc--eEEEEEhhhceeeeeecCCcceEEEEEecCc-c-eEEeeeeccceEeecCCchhhhhhhhcCCccccccccc--
Confidence            8776  4899999999999999999999999988886 3 5999999999999999999 999999999998855544  


Q ss_pred             CCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEE
Q psy15995        283 SGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEF  354 (683)
Q Consensus       283 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  354 (683)
                      .++.|++++.|++|++||..++++++.+..+ |...|..+++.  ...+++++.+|.+++||+++++..+.+
T Consensus       422 ~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~-~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l  490 (537)
T KOG0274|consen  422 RDNFLVSSSADGTIKLWDAEEGECLRTLEGR-HVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTL  490 (537)
T ss_pred             ccceeEeccccccEEEeecccCceeeeeccC-CcccEEEeecC--cceEEEEecCCeeEEEecccCchhhhh
Confidence            5678999999999999999999999999864 56888888876  467889999999999999999887765

>KOG1036|consensus

Probab=99.96  E-value=2.2e-27  Score=198.90  Aligned_cols=271  Identities=18%  Similarity=0.269  Sum_probs=220.5

Q ss_pred             cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCce
Q psy15995        271 HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSV  350 (683)
Q Consensus       271 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  350 (683)
                      ....|.++.|+|.+..|++++.||.+++||....+....+.   |..++.+++|.+ ...+++|+.||.|+.+|+.++..
T Consensus        12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~---~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~   87 (323)
T KOG1036|consen   12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK---HGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNE   87 (323)
T ss_pred             ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee---cCCceeeeeccC-CceEEEeccCceEEEEEecCCcc
Confidence            46789999999999999999999999999999887777776   899999999997 45689999999999999998764


Q ss_pred             eeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEc
Q psy15995        351 VSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN  430 (683)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~  430 (683)
                      .                                             .+..|..++.++.+++....+++|+.|++|++||
T Consensus        88 ~---------------------------------------------~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD  122 (323)
T KOG1036|consen   88 D---------------------------------------------QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWD  122 (323)
T ss_pred             e---------------------------------------------eeccCCCceEEEEeeccCCeEEEcccCccEEEEe
Confidence            2                                             3456999999999999889999999999999999


Q ss_pred             CCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEe
Q psy15995        431 AKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVE  510 (683)
Q Consensus       431 ~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (683)
                      .+.........  ....|.++...++.|+.|+.+..+.+||+++.....                               
T Consensus       123 ~R~~~~~~~~d--~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~-------------------------------  169 (323)
T KOG1036|consen  123 PRNKVVVGTFD--QGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPF-------------------------------  169 (323)
T ss_pred             ccccccccccc--cCceEEEEeccCCEEEEeecCceEEEEEcccccchh-------------------------------
Confidence            99755444443  445899999999999999999999999999764311                               


Q ss_pred             CCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcc--eee----------cCCcCeeEEEECCCCCE
Q psy15995        511 NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPK--AEL----------DHLGPVTDCSFSPSNEY  578 (683)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~----------~~~~~v~~~~~s~~~~~  578 (683)
                         +...-..+..+.++++-|++.=.++++-||.|.+=.++..+....  ..+          ..--+|.+++|+|-...
T Consensus       170 ---q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~t  246 (323)
T KOG1036|consen  170 ---QRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGT  246 (323)
T ss_pred             ---hhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccce
Confidence               222334556789999999988899999999988755554411111  111          12247999999999999


Q ss_pred             EEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeec
Q psy15995        579 LVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSL  628 (683)
Q Consensus       579 l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~  628 (683)
                      ||+|+.||.|.+||+.+.+.+.....  ....|.+++|+.||..||+++.
T Consensus       247 faTgGsDG~V~~Wd~~~rKrl~q~~~--~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  247 FATGGSDGIVNIWDLFNRKRLKQLAK--YETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             EEecCCCceEEEccCcchhhhhhccC--CCCceEEEEeccCCCeEEEEec
Confidence            99999999999999998887654432  4567999999999999999874

>KOG0299|consensus

Probab=99.96  E-value=1.1e-27  Score=211.67  Aligned_cols=298  Identities=19%  Similarity=0.295  Sum_probs=241.0

Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceee-----------------ec-cccccCeEEEEECCC
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM-----------------TK-QEHSRFVQAVRYSPS  283 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-----------------~~-~~~~~~v~~~~~~~~  283 (683)
                      ...+..|.-++.+++++|++.+ .++++.+++|.-|+..+++...                 .- ..|...+.+++.++|
T Consensus       135 ~~~~~~H~~s~~~vals~d~~~-~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~D  213 (479)
T KOG0299|consen  135 FRVIGKHQLSVTSVALSPDDKR-VFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSD  213 (479)
T ss_pred             ceeeccccCcceEEEeeccccc-eeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCC
Confidence            5567789999999999999996 9999999999999977766320                 11 268889999999999


Q ss_pred             CCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceec
Q psy15995        284 GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQ  363 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  363 (683)
                      |++|++|+.|..|.||+.++.+.++.+..  |.+.|.+++|-.....+++++.|+.+++|+++....+.++ .+++....
T Consensus       214 gkylatgg~d~~v~Iw~~~t~ehv~~~~g--hr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetl-yGHqd~v~  290 (479)
T KOG0299|consen  214 GKYLATGGRDRHVQIWDCDTLEHVKVFKG--HRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETL-YGHQDGVL  290 (479)
T ss_pred             CcEEEecCCCceEEEecCcccchhhcccc--cccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHH-hCCcccee
Confidence            99999999999999999999999999876  9999999999998889999999999999999987766554 45556666


Q ss_pred             eEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCC
Q psy15995        364 QVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAG  443 (683)
Q Consensus       364 ~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~  443 (683)
                      .+.....+..+-+|+.|.++++|++..  .....+.+|.+.+-|++|-.+ ..+++|+.+|.|.+|++...+++......
T Consensus       291 ~IdaL~reR~vtVGgrDrT~rlwKi~e--esqlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~~A  367 (479)
T KOG0299|consen  291 GIDALSRERCVTVGGRDRTVRLWKIPE--ESQLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSRLA  367 (479)
T ss_pred             eechhcccceEEeccccceeEEEeccc--cceeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeecccCceeEeecc
Confidence            677777788888888999999999954  444567888999999999855 78999999999999999999888777655


Q ss_pred             CCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCC
Q psy15995        444 HGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYE  523 (683)
Q Consensus       444 ~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  523 (683)
                      |.-.-.                                                                 ......+.-
T Consensus       368 Hgv~~~-----------------------------------------------------------------~~~~~~~~W  382 (479)
T KOG0299|consen  368 HGVIPE-----------------------------------------------------------------LDPVNGNFW  382 (479)
T ss_pred             ccccCC-----------------------------------------------------------------ccccccccc
Confidence            532100                                                                 001112245


Q ss_pred             CcEEEEccCCCEEEEEcCCCcEEEEEcCCC--ccCcceeecCCcCeeEEEECCCCCEEEEE-eCCCeEEEE
Q psy15995        524 PSSISLDHEHGLVAVGGADSKVHIYELNNK--SLSPKAELDHLGPVTDCSFSPSNEYLVAS-DAHRKVVLY  591 (683)
Q Consensus       524 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~  591 (683)
                      +++++..|...++|+|+.+|.|++|.+..+  .+.....+...+-|++++|+++|+++++| +....+--|
T Consensus       383 itsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagiGkEhRlGRW  453 (479)
T KOG0299|consen  383 ITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGIGKEHRLGRW  453 (479)
T ss_pred             eeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEeccccccccee
Confidence            789999999999999999999999999988  34334445577889999999999977765 333333333

>KOG0274|consensus

Probab=99.96  E-value=9.6e-28  Score=232.87  Aligned_cols=281  Identities=24%  Similarity=0.378  Sum_probs=236.9

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccc-cccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILK-NEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS  162 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  162 (683)
                      |...+.+..|.  ..++++++.+++|++||..++..+.. +..|.              ..+.++++..-+.+|++|+.|
T Consensus       207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~--------------g~V~~l~~~~~~~~lvsgS~D  270 (537)
T KOG0274|consen  207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHF--------------GGVWGLAFPSGGDKLVSGSTD  270 (537)
T ss_pred             Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCC--------------CCceeEEEecCCCEEEEEecC
Confidence            67788899888  45899999999999999999988887 88886              789999999888899999999


Q ss_pred             ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCC
Q psy15995        163 GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRP  242 (683)
Q Consensus       163 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  242 (683)
                      .++++||..++++...  +.+|...                                            |.++...+.  
T Consensus       271 ~t~rvWd~~sg~C~~~--l~gh~st--------------------------------------------v~~~~~~~~--  302 (537)
T KOG0274|consen  271 KTERVWDCSTGECTHS--LQGHTSS--------------------------------------------VRCLTIDPF--  302 (537)
T ss_pred             CcEEeEecCCCcEEEE--ecCCCce--------------------------------------------EEEEEccCc--
Confidence            9999999988875532  3333343                                            444433333  


Q ss_pred             eEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEE
Q psy15995        243 FRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAV  322 (683)
Q Consensus       243 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~  322 (683)
                       .+++|+.|.+|++|++++++.+..+.+|..+|.++..+  +.++++|+.|++|++||..+++++..+..  |...|.++
T Consensus       303 -~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~g--H~~~V~sl  377 (537)
T KOG0274|consen  303 -LLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSG--HTGRVYSL  377 (537)
T ss_pred             -eEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecC--CcceEEEE
Confidence             48889999999999999999999999999999999998  77999999999999999999999999987  99999999


Q ss_pred             EEccCCCEEEEEECCCcEEEEECCCC-ceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeee-
Q psy15995        323 AWKPDGTQLLTASGDKTCKLWDIETK-SVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKG-  400 (683)
Q Consensus       323 ~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~-  400 (683)
                      .+.+. ..+++|+.|+.|++||++++ +++..+.......   ......++.++.++.|+.|++||... ....+.+.+ 
T Consensus       378 ~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v---~~l~~~~~~Lvs~~aD~~Ik~WD~~~-~~~~~~~~~~  452 (537)
T KOG0274|consen  378 IVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLV---SSLLLRDNFLVSSSADGTIKLWDAEE-GECLRTLEGR  452 (537)
T ss_pred             EecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCcccc---cccccccceeEeccccccEEEeeccc-CceeeeeccC
Confidence            88765 89999999999999999999 7766654333222   44445789999999999999999998 555666776 


Q ss_pred             ccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceec
Q psy15995        401 HNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       401 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~  440 (683)
                      |...|..+++.  ...+++++.||.+.+||+++++..+..
T Consensus       453 ~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l  490 (537)
T KOG0274|consen  453 HVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTL  490 (537)
T ss_pred             CcccEEEeecC--cceEEEEecCCeeEEEecccCchhhhh
Confidence            67888888876  467889999999999999999887765

>KOG0300|consensus

Probab=99.96  E-value=3e-28  Score=204.40  Aligned_cols=331  Identities=15%  Similarity=0.236  Sum_probs=255.0

Q ss_pred             cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE
Q psy15995         76 AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY  155 (683)
Q Consensus        76 ~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  155 (683)
                      ++.+.|.||++.|+.++.......+.+++.|.+-+||.++++.++.++.+|.              ..|+++.|++.+.+
T Consensus       139 ~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~--------------GSVNsikfh~s~~L  204 (481)
T KOG0300|consen  139 RLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHT--------------GSVNSIKFHNSGLL  204 (481)
T ss_pred             eehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccc--------------cceeeEEeccccce
Confidence            4567789999999999988888899999999999999999999999999987              88999999999999


Q ss_pred             EEeecCCccEEEEeccccceeeeccc-cccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEE
Q psy15995        156 IASGDISGKVRIWDTVNKEHILKNEF-HPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINS  234 (683)
Q Consensus       156 l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  234 (683)
                      +++++.|++-.||...-.-.+..... ..|.+. ..+.-+.......-.+..      .-...-..++..+.+|...|.+
T Consensus       205 ~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsE-eE~e~sDe~~~d~d~~~~------sD~~tiRvPl~~ltgH~~vV~a  277 (481)
T KOG0300|consen  205 LLTASGDETAHIWKAAVNWEVPSNNAPSDHSSE-EEEEHSDEHNRDTDSSEK------SDGHTIRVPLMRLTGHRAVVSA  277 (481)
T ss_pred             EEEccCCcchHHHHHhhcCcCCCCCCCCCCCch-hhhhcccccccccccccc------cCCceeeeeeeeeeccccceEe
Confidence            99999999999998432211111000 011000 000000000000000000      0000012356778999999999


Q ss_pred             EEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC-eeEEeccCC
Q psy15995        235 CDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA-DLVSELGNP  313 (683)
Q Consensus       235 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~  313 (683)
                      +.|...++. +++++.|.+..+||+++++.+..+.+|....+.++-+|..+++++.+.|.+.++||.+.. ..+..+++ 
T Consensus       278 ~dWL~gg~Q-~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQG-  355 (481)
T KOG0300|consen  278 CDWLAGGQQ-MVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQG-  355 (481)
T ss_pred             hhhhcCcce-eeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecc-
Confidence            999999985 999999999999999999999999999999999999999999999999999999999843 33455554 


Q ss_pred             ccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCc
Q psy15995        314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPST  393 (683)
Q Consensus       314 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~  393 (683)
                       |...|+++.|..+. .+++++.|.+|++||+++.+.                                           
T Consensus       356 -HtdtVTS~vF~~dd-~vVSgSDDrTvKvWdLrNMRs-------------------------------------------  390 (481)
T KOG0300|consen  356 -HTDTVTSVVFNTDD-RVVSGSDDRTVKVWDLRNMRS-------------------------------------------  390 (481)
T ss_pred             -cccceeEEEEecCC-ceeecCCCceEEEeeeccccC-------------------------------------------
Confidence             99999999999765 589999999999999987642                                           


Q ss_pred             ceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCccee---ccCCCCcceeEEEEe----CCeEEEEEcCCe
Q psy15995        394 PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRV---QGAGHGNQINGMKAT----GELLYTCGIDDT  466 (683)
Q Consensus       394 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~---~~~~~~~~v~~~~~~----~~~l~~~~~d~~  466 (683)
                      ++.++. ...+++.++.+..++.++.-..+..|++||+......+.   ...+|..-|.+.+|.    -.-|++++.|..
T Consensus       391 plATIR-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~  469 (481)
T KOG0300|consen  391 PLATIR-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRM  469 (481)
T ss_pred             cceeee-cCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccccce
Confidence            122222 356788889988888888888889999999987665443   346888999999998    346889999999


Q ss_pred             EEEEeCCCC
Q psy15995        467 IKQVDLSSN  475 (683)
Q Consensus       467 i~~~~~~~~  475 (683)
                      +.-|.+...
T Consensus       470 v~gW~in~p  478 (481)
T KOG0300|consen  470 VAGWKINTP  478 (481)
T ss_pred             eeeeEeccc
Confidence            999988753

>KOG1538|consensus

Probab=99.96  E-value=1.4e-26  Score=214.12  Aligned_cols=273  Identities=17%  Similarity=0.231  Sum_probs=218.0

Q ss_pred             CeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccc
Q psy15995         46 QPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      .+..++|-|||.-|+.+.++.+.+||.++|.++.++++|++.|.|++||.||+++|+|+.|..|.+|+-+-...+ ++  
T Consensus        14 ci~d~afkPDGsqL~lAAg~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~L-kY--   90 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGIL-KY--   90 (1081)
T ss_pred             chheeEECCCCceEEEecCCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccccccee-ee--
Confidence            677899999999999999999999999999999999999999999999999999999999999999986543222 22  


Q ss_pred             ccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEec
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE  205 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  205 (683)
                                   .+...|.|+.|.|-.+.|++++-+ ..-+|....... .+..   ...++.+++|..||++++.+-.
T Consensus        91 -------------SH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V-~K~k---ss~R~~~CsWtnDGqylalG~~  152 (1081)
T KOG1538|consen   91 -------------SHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSV-SKHK---SSSRIICCSWTNDGQYLALGMF  152 (1081)
T ss_pred             -------------ccCCeeeEeecCchHHHhhhcchh-hccccChhhhhH-Hhhh---hheeEEEeeecCCCcEEEEecc
Confidence                         223789999999999999998753 567898776432 2222   2378999999999999999987


Q ss_pred             CCceEEEEEEccCCCceeee---ecCCcCeEEEEeecCCC----eEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEE
Q psy15995        206 GRERFGHVFMSETGTSVGEI---SGQSKPINSCDFKPSRP----FRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAV  278 (683)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~----~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~  278 (683)
                      ++.  +.+. ..+|++...+   .+...+|++++|+|...    ..+++.....++.++.+. |+.+..-+.-.-...|+
T Consensus       153 nGT--IsiR-Nk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~Ci  228 (1081)
T KOG1538|consen  153 NGT--ISIR-NKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRALNFDPCCI  228 (1081)
T ss_pred             Cce--EEee-cCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccCCCCchhh
Confidence            765  3333 3344444333   34778999999999743    246777777777777753 44444333445567899


Q ss_pred             EECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECC
Q psy15995        279 RYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIE  346 (683)
Q Consensus       279 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~  346 (683)
                      .+.++|++++.|+.|+.+.+|- +.|-.+.++..  ....|..++..|+++.++.|+.||+|..|++.
T Consensus       229 sYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~--~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~  293 (1081)
T KOG1538|consen  229 SYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGE--QDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI  293 (1081)
T ss_pred             eeccCCcEEEEccCCCceEEEe-ecCeEEeeccc--cceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence            9999999999999999999997 67777777765  77899999999999999999999999999875

>KOG0641|consensus

Probab=99.96  E-value=1.3e-25  Score=179.21  Aligned_cols=298  Identities=23%  Similarity=0.293  Sum_probs=227.0

Q ss_pred             cccCeEEEEECCCCCEEEEEcCCCcEEEEeCC------CCe-------eEEeccCCccccCeEEEEEccCCCEEEEEECC
Q psy15995        271 HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGA------SAD-------LVSELGNPAHKGGVYAVAWKPDGTQLLTASGD  337 (683)
Q Consensus       271 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~------~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  337 (683)
                      ....|++++|+|.|.+.++|+...++++....      .+.       .+..-....|.+.|.|.+|+|+|+++++|+.|
T Consensus        31 dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsnd  110 (350)
T KOG0641|consen   31 DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSND  110 (350)
T ss_pred             chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCC
Confidence            56789999999999999999999988876322      211       11111223489999999999999999999999


Q ss_pred             CcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCC----
Q psy15995        338 KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPD----  413 (683)
Q Consensus       338 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----  413 (683)
                      .+|++..++.......                                       -+-..+..|.+.|..++|..+    
T Consensus       111 k~ik~l~fn~dt~~~~---------------------------------------g~dle~nmhdgtirdl~fld~~~s~  151 (350)
T KOG0641|consen  111 KTIKVLPFNADTCNAT---------------------------------------GHDLEFNMHDGTIRDLAFLDDPESG  151 (350)
T ss_pred             ceEEEEeccccccccc---------------------------------------CcceeeeecCCceeeeEEecCCCcC
Confidence            9999987665432111                                       112345679999999999653    


Q ss_pred             CCEEEEEe-CCCcEEEEcCCCCCcceeccCCCCcceeEE-EEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCcee
Q psy15995        414 RGTVFTGS-HDGFITRWNAKTGENDRVQGAGHGNQINGM-KATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGL  491 (683)
Q Consensus       414 ~~~l~~~~-~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~-~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~  491 (683)
                      +..|++++ .|..|++-|...++....+ .+|.+.|.++ .|++-++++++.|.+|++||++-+......          
T Consensus       152 ~~il~s~gagdc~iy~tdc~~g~~~~a~-sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l----------  220 (350)
T KOG0641|consen  152 GAILASAGAGDCKIYITDCGRGQGFHAL-SGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTL----------  220 (350)
T ss_pred             ceEEEecCCCcceEEEeecCCCCcceee-cCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeec----------
Confidence            45666654 4677888888888877766 6788888876 566999999999999999999865331110          


Q ss_pred             eecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEE
Q psy15995        492 DIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCS  571 (683)
Q Consensus       492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~  571 (683)
                                        .+...-.- -....+.++++.|.|++|++|..|....+||+..++.++++ .+|...|.++.
T Consensus       221 ------------------~~~~~~~g-lessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f-~phsadir~vr  280 (350)
T KOG0641|consen  221 ------------------DNDFHDGG-LESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRF-HPHSADIRCVR  280 (350)
T ss_pred             ------------------cCcccCCC-cccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeee-CCCccceeEEE
Confidence                              00000000 01245788999999999999999999999999999988554 46999999999


Q ss_pred             ECCCCCEEEEEeCCCeEEEEECCCCc--cccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCC
Q psy15995        572 FSPSNEYLVASDAHRKVVLYRVPDFE--LAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       572 ~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~  638 (683)
                      |||...||++++.|..|++-|++..-  .+.......|...+..+.|+|..--+++.+.|.++.+|-+.
T Consensus       281 fsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  281 FSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             eCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence            99999999999999999999997421  12223334499999999999999889999999999999764

>KOG0294|consensus

Probab=99.96  E-value=2.9e-27  Score=198.49  Aligned_cols=238  Identities=17%  Similarity=0.255  Sum_probs=203.3

Q ss_pred             ccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCc--EEEEecCCCCEEEEeCCCcc
Q psy15995         42 TQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGF--YIASGDISGKVRIWDTVNKE  118 (683)
Q Consensus        42 ~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~--~las~~~dg~i~iwd~~~~~  118 (683)
                      .+.+.++++|.+  ++++|.| .|.+|.|||+.....+..+-.|.+.|+++.|.++-.  .|++|++||.|.+|+...-+
T Consensus        41 aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~  118 (362)
T KOG0294|consen   41 AHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWE  118 (362)
T ss_pred             ccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeE
Confidence            466788998876  7999988 578999999999999999999999999999999875  89999999999999999999


Q ss_pred             cccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCC
Q psy15995        119 HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQ  198 (683)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  198 (683)
                      ++..++.|.              ..|+.+++.|.|+.-++.+.|+.+++||+-+|+.-....+.   .....+.|+|.|.
T Consensus       119 ~~~slK~H~--------------~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~---~~at~v~w~~~Gd  181 (362)
T KOG0294|consen  119 LLKSLKAHK--------------GQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK---NKATLVSWSPQGD  181 (362)
T ss_pred             Eeeeecccc--------------cccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC---CcceeeEEcCCCC
Confidence            999998887              67999999999999999999999999999998765554444   3445599999999


Q ss_pred             eEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEE
Q psy15995        199 RMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAV  278 (683)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~  278 (683)
                      ++++...+.   +.+|..++.....++... ..+.++.|...+  .+++|..|+.|.+||.........+.+|...|.++
T Consensus       182 ~F~v~~~~~---i~i~q~d~A~v~~~i~~~-~r~l~~~~l~~~--~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i  255 (362)
T KOG0294|consen  182 HFVVSGRNK---IDIYQLDNASVFREIENP-KRILCATFLDGS--ELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDI  255 (362)
T ss_pred             EEEEEeccE---EEEEecccHhHhhhhhcc-ccceeeeecCCc--eEEEecCCceEEEeccCCCccceeeecchhheeee
Confidence            888887764   667777765555544333 556677776666  49999999999999999999999999999999999


Q ss_pred             EE--CCCCCEEEEEcCCCcEEEEeCCCC
Q psy15995        279 RY--SPSGSHFASAGFDGKVFLYDGASA  304 (683)
Q Consensus       279 ~~--~~~~~~l~~~~~dg~i~iw~~~~~  304 (683)
                      .+  .|++.+|++++.||.|++||++..
T Consensus       256 ~~~~~~~~~~lvTaSSDG~I~vWd~~~~  283 (362)
T KOG0294|consen  256 ASYTNPEHEYLVTASSDGFIKVWDIDME  283 (362)
T ss_pred             EEEecCCceEEEEeccCceEEEEEcccc
Confidence            84  567789999999999999998765

>KOG1445|consensus

Probab=99.96  E-value=1.5e-26  Score=212.55  Aligned_cols=568  Identities=15%  Similarity=0.220  Sum_probs=313.1

Q ss_pred             CCCCeEEEe---cCCeEEEEeCCCC----cccccccCcccceEEEEECC-CCcEEEEecCCCCEEEEeCCCccccccccc
Q psy15995         54 PKGKNFLYT---NGNSVIIRNIENP----AISDIYTEHSCAVNVAKYSP-SGFYIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        54 ~~~~~l~~~---~~~~i~v~~~~~~----~~~~~~~~h~~~v~~~~~s~-d~~~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      ..+.++|+-   .++.+-|..+...    +.+..+.+|.+.|+.+.||| +..+||+|+.|..|+||.+..+-.. .+..
T Consensus        41 aS~~flAFn~e~~G~~lgvlPl~~~Gr~~r~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q-~LSa  119 (1012)
T KOG1445|consen   41 ASADFLAFNIEGEGGKLGVLPLTAKGRRTRDIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQ-KLSA  119 (1012)
T ss_pred             cccceEEEeecCCCceEEEEeccccCccccccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCccc-ccCC
Confidence            345566665   3557777766532    34455789999999999999 5568999999999999999855110 0000


Q ss_pred             ccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEec
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE  205 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  205 (683)
                                                                         ....+.+.+-.+.++.|+|...-+++.+.
T Consensus       120 ---------------------------------------------------pe~~~g~~~~~vE~l~fHpTaDgil~s~a  148 (1012)
T KOG1445|consen  120 ---------------------------------------------------PEIDVGGGNVIVECLRFHPTADGILASGA  148 (1012)
T ss_pred             ---------------------------------------------------cceeecCCceEEEEeecccCcCceEEecc
Confidence                                                               00112222345778899987655555554


Q ss_pred             CCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC-CceeeeccccccC-eEEEEECCC
Q psy15995        206 GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP-FKFKMTKQEHSRF-VQAVRYSPS  283 (683)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~-v~~~~~~~~  283 (683)
                      .+.  +.+|+..+++.+.++.+|.+.|.+..|+.||.. +++++.|..|+|||-+. ++.++..++|.+. -..+.|.-+
T Consensus       149 ~g~--v~i~D~stqk~~~el~~h~d~vQSa~WseDG~l-latscKdkqirifDPRa~~~piQ~te~H~~~rdsRv~w~Gn  225 (1012)
T KOG1445|consen  149 HGS--VYITDISTQKTAVELSGHTDKVQSADWSEDGKL-LATSCKDKQIRIFDPRASMEPIQTTEGHGGMRDSRVLWAGN  225 (1012)
T ss_pred             Cce--EEEEEcccCceeecccCCchhhhccccccCCce-EeeecCCcceEEeCCccCCCccccccccccchhheeeeccc
Confidence            433  789999999999999999999999999999995 99999999999999654 5566667777653 234566655


Q ss_pred             CCEEEEEcCC----CcEEEEeCCCC-eeEEeccCCccccCeEEEEEccCCCEEEEEE-CCCcEEEEECCCCceeeEEEec
Q psy15995        284 GSHFASAGFD----GKVFLYDGASA-DLVSELGNPAHKGGVYAVAWKPDGTQLLTAS-GDKTCKLWDIETKSVVSEFIMG  357 (683)
Q Consensus       284 ~~~l~~~~~d----g~i~iw~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~  357 (683)
                      -..|++.+.+    ..|++||.+.. ..+.++... ....|.---|.||.++|+.++ .+..+..+.+...++...-...
T Consensus       226 ~~rlisTGF~~~R~reV~~~Dtr~f~~p~~tleld-~stGvLiPl~DpDt~llfLaGKG~~~l~~lE~~d~qPyLs~v~~  304 (1012)
T KOG1445|consen  226 WERLISTGFTTKRIREVRAYDTRKFGAPVHTLELD-SSTGVLIPLYDPDTRLLFLAGKGTNKLFMLEMQDRQPYLSHVFE  304 (1012)
T ss_pred             hhhhhhcccchhhheeeeeeeccccCCcceeEEee-cccceEeeeecCCCceEEEecCCcceEEEEEecCCCcchhhhhh
Confidence            5567666544    57999997753 333333321 334555567889888766554 4566777776544331100000


Q ss_pred             C--cceeceEEEEecCC------------------E-----------------------------EEEE----ecCCcEE
Q psy15995        358 N--QVEDQQVSCLWQGD------------------Y-----------------------------LLTV----SLSGFIS  384 (683)
Q Consensus       358 ~--~~~~~~~~~~~~~~------------------~-----------------------------l~~~----~~~g~i~  384 (683)
                      .  .......+..+...                  .                             ...+    +.+..+.
T Consensus       305 ~tle~~~~GA~lvpkral~VM~~EV~rvlQLt~~~ivPi~y~VPRksyrdFH~DLfPeT~G~~p~~~ageWlnG~Nq~vq  384 (1012)
T KOG1445|consen  305 LTLEEQTLGATLVPKRALHVMDGEVDRVLQLTKSSIVPIPYIVPRKSYRDFHSDLFPETRGAEPGCTAGEWLNGTNQVVQ  384 (1012)
T ss_pred             hcchhhhccceecchhhhhhcchhhhhheecccCceeecccccchhhhhhhhhhhCccccCCccCcCccceecCcccccc
Confidence            0  00000000000000                  0                             0000    0000000


Q ss_pred             EEecCCCC--------ccee----eeeeccccEEEEEEe--------------CCC-CEEEEEeCCCcEEEEcCCCCCcc
Q psy15995        385 YLDVNNPS--------TPIR----VIKGHNKPITALALS--------------PDR-GTVFTGSHDGFITRWNAKTGEND  437 (683)
Q Consensus       385 ~~~~~~~~--------~~~~----~~~~~~~~v~~~~~~--------------~~~-~~l~~~~~dg~i~~w~~~~~~~~  437 (683)
                      -..+....        ++.-    ...+.-.++......              ||- ..=++ .....++-.+.+..+..
T Consensus       385 KvSl~Pa~r~h~~~pp~~~P~p~~a~t~sf~~v~~ppaaP~~~~n~~~~~~~~Pd~~~qpaV-~~~~e~r~l~~~~~E~~  463 (1012)
T KOG1445|consen  385 KVSLAPAQRSHSPPPPEPVPTPKVAQTPSFVPVPTPPAAPRPMSNNNSSSNNVPDVQEQPAV-PKKEEVRELDYRPYEKE  463 (1012)
T ss_pred             ccccCchhccCCCCCCCCCCCcccccCCCCccccCCCCCCCccccccccccCCCccccCCCc-Ccchhhhhhcccccccc
Confidence            00000000        0000    000000000000000              110 00000 00000111110000000


Q ss_pred             ---------eeccCCCCc----------------------ceeEEE---E--------------------eCCeEEEEE-
Q psy15995        438 ---------RVQGAGHGN----------------------QINGMK---A--------------------TGELLYTCG-  462 (683)
Q Consensus       438 ---------~~~~~~~~~----------------------~v~~~~---~--------------------~~~~l~~~~-  462 (683)
                               .....+...                      .+....   .                    .+....+.+ 
T Consensus       464 ~g~~~~~~dad~~~g~sS~~s~~~~~~~~~~kP~S~plt~~~s~~s~~~P~~~ksvPe~~~~~~g~~~sat~~v~~s~s~  543 (1012)
T KOG1445|consen  464 NGVHTPNADADSTQGNSSPISTISPEPVTIVKPASTPLTDSVSTPSVVGPAFGKSVPEQPPVNFGKPISATNRVPLSQSV  543 (1012)
T ss_pred             cCccCCCcccccccCCCCCccccCCCcccccCCCCcccccccccccccCccccccCCCCCCcccCCCccccccccccccc
Confidence                     000000000                      000000   0                    000000000 


Q ss_pred             -----cCCeEEEEeCCCCcc----------cCCceecCCCCceeeecCCeEEEE---EeceEEEEeCCce-------eee
Q psy15995        463 -----IDDTIKQVDLSSNAY----------SGPEVKLGSQPRGLDIDENTLVTV---TVKQISIVENGAK-------VSS  517 (683)
Q Consensus       463 -----~d~~i~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------~~~  517 (683)
                           -=|.+.-+.-..+..          ......+++...++..+...+...   ....+.+++..+.       +..
T Consensus       544 r~~s~v~G~iSKFRH~~Gt~ghks~hi~NLrnln~~~PgEsnGfcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~  623 (1012)
T KOG1445|consen  544 RPKSCVVGQISKFRHVDGTQGHKSAHISNLRNLNTRLPGESNGFCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPG  623 (1012)
T ss_pred             cccceeeccchheeeccCccccchhhhhhhhcccccCCCccCceeeccceEEEEecCCCceEEEEEcCCCCCCCcccccc
Confidence                 001111111111100          011112233333333333332222   1344555543221       122


Q ss_pred             ecCCCCCcEEEEcc-CCCEEEEEcCCCcEEEEEcCCCccCc------ceeecCCcCeeEEEECC-CCCEEEEEeCCCeEE
Q psy15995        518 LPIDYEPSSISLDH-EHGLVAVGGADSKVHIYELNNKSLSP------KAELDHLGPVTDCSFSP-SNEYLVASDAHRKVV  589 (683)
Q Consensus       518 ~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~------~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~  589 (683)
                      +.....++.+.|.| |...||++++||.|++|.+..+.+..      .....|...|+++.|+| -...|++++.|-+|+
T Consensus       624 l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~  703 (1012)
T KOG1445|consen  624 LFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIE  703 (1012)
T ss_pred             cccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceee
Confidence            33455678888988 66789999999999999997664332      12234889999999999 567899999999999


Q ss_pred             EEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCCeEEE
Q psy15995        590 LYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVS  668 (683)
Q Consensus       590 i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s  668 (683)
                      +||+.+.+...  .+.+|.+.|..++|||||+.+|+.+.||+|++|+..+++....-..+.-...-..+.|. |+++++.
T Consensus       704 lWDl~~~~~~~--~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv  781 (1012)
T KOG1445|consen  704 LWDLANAKLYS--RLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIV  781 (1012)
T ss_pred             eeehhhhhhhh--eeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEE
Confidence            99999988764  44459999999999999999999999999999999888766554322223445677887 9999998


Q ss_pred             eeCCCc----EEEEee
Q psy15995        669 VGQDCN----TKIWEI  680 (683)
Q Consensus       669 ~~~d~~----v~vw~~  680 (683)
                      .|.|..    |.+|+-
T Consensus       782 ~Gfdk~SeRQv~~Y~A  797 (1012)
T KOG1445|consen  782 VGFDKSSERQVQMYDA  797 (1012)
T ss_pred             ecccccchhhhhhhhh
Confidence            887753    555553

>KOG0639|consensus

Probab=99.96  E-value=6.3e-28  Score=215.19  Aligned_cols=285  Identities=15%  Similarity=0.220  Sum_probs=231.4

Q ss_pred             CcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC
Q psy15995         83 EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS  162 (683)
Q Consensus        83 ~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  162 (683)
                      .|..-|.++++|...+++.||+. |.|+|||+....         ...++..+..+...+-++...+.|||+.|++|++-
T Consensus       417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg---------~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGea  486 (705)
T KOG0639|consen  417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPG---------NKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEA  486 (705)
T ss_pred             ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCC---------CCCccccccccCcccceeeeEecCCCceEEecccc
Confidence            59999999999999999999976 469999997651         22344444444455779999999999999999999


Q ss_pred             ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCC
Q psy15995        163 GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRP  242 (683)
Q Consensus       163 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  242 (683)
                      .++.|||+.......+.++....-...+++.                                            +||.+
T Consensus       487 stlsiWDLAapTprikaeltssapaCyALa~--------------------------------------------spDak  522 (705)
T KOG0639|consen  487 STLSIWDLAAPTPRIKAELTSSAPACYALAI--------------------------------------------SPDAK  522 (705)
T ss_pred             ceeeeeeccCCCcchhhhcCCcchhhhhhhc--------------------------------------------CCccc
Confidence            9999999988765544444432233344444                                            44444


Q ss_pred             eEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEE
Q psy15995        243 FRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAV  322 (683)
Q Consensus       243 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~  322 (683)
                       +.++++.||.|.|||+.+...+..+++|.+.+.|+.+++||..|-+|+-|.+|+.||++++..+....   ....|.++
T Consensus       523 -vcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd---F~SQIfSL  598 (705)
T KOG0639|consen  523 -VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD---FSSQIFSL  598 (705)
T ss_pred             -eeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh---hhhhheec
Confidence             37778889999999999999999999999999999999999999999999999999999998877765   56789999


Q ss_pred             EEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeecc
Q psy15995        323 AWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHN  402 (683)
Q Consensus       323 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~  402 (683)
                      ..+|++.+++.|-+++.+.+......+                                             ...+..|+
T Consensus       599 g~cP~~dWlavGMens~vevlh~skp~---------------------------------------------kyqlhlhe  633 (705)
T KOG0639|consen  599 GYCPTGDWLAVGMENSNVEVLHTSKPE---------------------------------------------KYQLHLHE  633 (705)
T ss_pred             ccCCCccceeeecccCcEEEEecCCcc---------------------------------------------ceeecccc
Confidence            999999999999999988887665332                                             13345689


Q ss_pred             ccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEE--EEeCCeEEEEEcCCeEEEEeC
Q psy15995        403 KPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGM--KATGELLYTCGIDDTIKQVDL  472 (683)
Q Consensus       403 ~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~~~~~  472 (683)
                      .-|.++.|.+.|+++++.+.|+.+..|...-+..+....  ....|.+.  +++++++++|+.|+...+|.+
T Consensus       634 ScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqsk--E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  634 SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK--ESSSVLSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             cEEEEEEecccCceeeecCchhhhhhccCccccceeecc--ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence            999999999999999999999999999998887765554  45555554  445889999999988888764

>KOG0647|consensus

Probab=99.96  E-value=1.2e-26  Score=193.59  Aligned_cols=283  Identities=21%  Similarity=0.274  Sum_probs=218.9

Q ss_pred             ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC-ce-eeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCC
Q psy15995        226 SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF-KF-KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS  303 (683)
Q Consensus       226 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  303 (683)
                      ....+.|.+++|+|...+++++++.|++||+|+++.. .. -+....|.++|.+++|+.||..+++|+.|+.+++||+.+
T Consensus        24 ~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S  103 (347)
T KOG0647|consen   24 NPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLAS  103 (347)
T ss_pred             CCcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccC
Confidence            3456789999999977667889999999999998763 22 244567999999999999999999999999999999999


Q ss_pred             CeeEEeccCCccccCeEEEEEccCCC--EEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCC
Q psy15995        304 ADLVSELGNPAHKGGVYAVAWKPDGT--QLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSG  381 (683)
Q Consensus       304 ~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g  381 (683)
                      ++....-.   |.++|..+.|-+...  .|++|+.|++|+.||++...++.++....    ...+..-....++++..+.
T Consensus       104 ~Q~~~v~~---Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPe----RvYa~Dv~~pm~vVata~r  176 (347)
T KOG0647|consen  104 GQVSQVAA---HDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPE----RVYAADVLYPMAVVATAER  176 (347)
T ss_pred             CCeeeeee---cccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccc----eeeehhccCceeEEEecCC
Confidence            96655433   999999999987554  89999999999999999988888776544    3334444567899999999


Q ss_pred             cEEEEecCCCCcceeeee-eccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceecc-CCCCcceeEEEEeCCeEE
Q psy15995        382 FISYLDVNNPSTPIRVIK-GHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQG-AGHGNQINGMKATGELLY  459 (683)
Q Consensus       382 ~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~-~~~~~~v~~~~~~~~~l~  459 (683)
                      .|.+|+++++....+... .-+-.++|++..+|....+.|+-+|.+.+..+..+.....+. ..|...-.          
T Consensus       177 ~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~----------  246 (347)
T KOG0647|consen  177 HIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNS----------  246 (347)
T ss_pred             cEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCC----------
Confidence            999999987655443332 234568899999998888999999999999887753321110 11111000          


Q ss_pred             EEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEE
Q psy15995        460 TCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVG  539 (683)
Q Consensus       460 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  539 (683)
                                                                               ....-+.+.+++|+|....|+++
T Consensus       247 ---------------------------------------------------------~~~~VYaVNsi~FhP~hgtlvTa  269 (347)
T KOG0647|consen  247 ---------------------------------------------------------VNDDVYAVNSIAFHPVHGTLVTA  269 (347)
T ss_pred             ---------------------------------------------------------CCCceEEecceEeecccceEEEe
Confidence                                                                     00011357889999999999999


Q ss_pred             cCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEe
Q psy15995        540 GADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASD  583 (683)
Q Consensus       540 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~  583 (683)
                      +.||++.+||-+....+... ..|..+|+++.|+.+|.++|.+.
T Consensus       270 GsDGtf~FWDkdar~kLk~s-~~~~qpItcc~fn~~G~ifaYA~  312 (347)
T KOG0647|consen  270 GSDGTFSFWDKDARTKLKTS-ETHPQPITCCSFNRNGSIFAYAL  312 (347)
T ss_pred             cCCceEEEecchhhhhhhcc-CcCCCccceeEecCCCCEEEEEe
Confidence            99999999998776655332 34889999999999999998653

>KOG0294|consensus

Probab=99.96  E-value=2.4e-26  Score=192.99  Aligned_cols=283  Identities=21%  Similarity=0.319  Sum_probs=222.3

Q ss_pred             EEEEeeCCCeEEEEcCCC------------CceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEecc
Q psy15995        244 RIITGSEDNTIAVFEGPP------------FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG  311 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  311 (683)
                      .+++|+....|.=+++..            ......+..|...|++++.+  +.++|+|+.|-+|++||++....+..+.
T Consensus         3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll   80 (362)
T KOG0294|consen    3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILL   80 (362)
T ss_pred             eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhccee
Confidence            467777766666665322            22355667899999999984  7899999999999999999998888886


Q ss_pred             CCccccCeEEEEEccCCC--EEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecC
Q psy15995        312 NPAHKGGVYAVAWKPDGT--QLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVN  389 (683)
Q Consensus       312 ~~~~~~~i~~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~  389 (683)
                      .  |.+.|+++.|.+.-.  .|++|+.||.|.+|+......+                                      
T Consensus        81 ~--HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~--------------------------------------  120 (362)
T KOG0294|consen   81 S--HAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELL--------------------------------------  120 (362)
T ss_pred             c--cccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEe--------------------------------------
Confidence            6  999999999998765  8999999999999998765443                                      


Q ss_pred             CCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEE
Q psy15995        390 NPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQ  469 (683)
Q Consensus       390 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~  469 (683)
                            ..+++|.+.|+.++++|.+++.++.+.|+.++.||+-.++........                          
T Consensus       121 ------~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~--------------------------  168 (362)
T KOG0294|consen  121 ------KSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK--------------------------  168 (362)
T ss_pred             ------eeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC--------------------------
Confidence                  456789999999999999999999999999999999887754443211                          


Q ss_pred             EeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEE
Q psy15995        470 VDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYE  549 (683)
Q Consensus       470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d  549 (683)
                                                                          ...+.+.|+|.|.+++++..+ .|-+|.
T Consensus       169 ----------------------------------------------------~~at~v~w~~~Gd~F~v~~~~-~i~i~q  195 (362)
T KOG0294|consen  169 ----------------------------------------------------NKATLVSWSPQGDHFVVSGRN-KIDIYQ  195 (362)
T ss_pred             ----------------------------------------------------CcceeeEEcCCCCEEEEEecc-EEEEEe
Confidence                                                                123457889999988888775 599999


Q ss_pred             cCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEe--cCCCCeEEEee
Q psy15995        550 LNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAW--SPDSALVASGS  627 (683)
Q Consensus       550 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~--s~d~~~l~~~~  627 (683)
                      +++..+......+  ..+.++.|- ++..|++|.+|+.|.+||..+....  ..+.+|...|.++.+  .|++.+|++++
T Consensus       196 ~d~A~v~~~i~~~--~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~--~~~~AH~~RVK~i~~~~~~~~~~lvTaS  270 (362)
T KOG0294|consen  196 LDNASVFREIENP--KRILCATFL-DGSELLVGGDNEWISLKDTDSDTPL--TEFLAHENRVKDIASYTNPEHEYLVTAS  270 (362)
T ss_pred             cccHhHhhhhhcc--ccceeeeec-CCceEEEecCCceEEEeccCCCccc--eeeecchhheeeeEEEecCCceEEEEec
Confidence            9988776555432  456666664 5778999999999999999985554  344559999999985  56789999999


Q ss_pred             cCCcEEEEeCCCC-----ceeeEeecCCCCCCeeEEEEc
Q psy15995        628 LDTTIIIWSLASP-----AKHIIIKNAHPQSQITRLQWL  661 (683)
Q Consensus       628 ~d~~v~iw~~~~~-----~~~~~~~~~~~~~~v~~l~~~  661 (683)
                      .||.|+|||++..     +.+..+..   +..++++...
T Consensus       271 SDG~I~vWd~~~~~k~~~~~l~e~n~---~~RltCl~~~  306 (362)
T KOG0294|consen  271 SDGFIKVWDIDMETKKRPTLLAELNT---NVRLTCLRVK  306 (362)
T ss_pred             cCceEEEEEccccccCCcceeEEeec---CCccceeeeh
Confidence            9999999999876     33333332   5677777654

>PTZ00420 coronin; Provisional

Probab=99.96  E-value=5.2e-26  Score=221.52  Aligned_cols=254  Identities=13%  Similarity=0.159  Sum_probs=190.1

Q ss_pred             EeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCC-CCEEEEEcCCCcEEEEeCCCCe--------eEEeccCCcccc
Q psy15995        247 TGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPS-GSHFASAGFDGKVFLYDGASAD--------LVSELGNPAHKG  317 (683)
Q Consensus       247 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~--------~~~~~~~~~~~~  317 (683)
                      .|+.++.+++|+......+..+.+|...|.+++|+|+ +++|++|+.||.|++||+.++.        .+..+.  +|..
T Consensus        49 gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~--gH~~  126 (568)
T PTZ00420         49 GGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILK--GHKK  126 (568)
T ss_pred             CCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEee--cCCC
Confidence            3667889999998777788889999999999999997 7899999999999999997642        222333  4899


Q ss_pred             CeEEEEEccCCCE-EEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCccee
Q psy15995        318 GVYAVAWKPDGTQ-LLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIR  396 (683)
Q Consensus       318 ~i~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~  396 (683)
                      .|.+++|+|++.. +++++.|+.|++||+++++....+                                          
T Consensus       127 ~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i------------------------------------------  164 (568)
T PTZ00420        127 KISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQI------------------------------------------  164 (568)
T ss_pred             cEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEE------------------------------------------
Confidence            9999999998876 468899999999999987644322                                          


Q ss_pred             eeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCc
Q psy15995        397 VIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNA  476 (683)
Q Consensus       397 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~  476 (683)
                        . |...|.+++|+|+|.+|++++.|+.|++||+++++..... .+|...+....                        
T Consensus       165 --~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl-~gH~g~~~s~~------------------------  216 (568)
T PTZ00420        165 --N-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSF-HIHDGGKNTKN------------------------  216 (568)
T ss_pred             --e-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEE-ecccCCceeEE------------------------
Confidence              1 3457999999999999999999999999999988766544 33443322110                        


Q ss_pred             ccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCC----cEEEEEcCC
Q psy15995        477 YSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADS----KVHIYELNN  552 (683)
Q Consensus       477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg----~i~i~d~~~  552 (683)
                                                                     +....++++++++++++.|+    .|++||+..
T Consensus       217 -----------------------------------------------v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~  249 (568)
T PTZ00420        217 -----------------------------------------------IWIDGLGGDDNYILSTGFSKNNMREMKLWDLKN  249 (568)
T ss_pred             -----------------------------------------------EEeeeEcCCCCEEEEEEcCCCCccEEEEEECCC
Confidence                                                           12234567888888877664    699999885


Q ss_pred             -CccCcceeec-CCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCC
Q psy15995        553 -KSLSPKAELD-HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDS  620 (683)
Q Consensus       553 -~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~  620 (683)
                       ...+...... +.+.+......+++.++++|..|+.|++|++..+.+.....+. +..+..+++|.|+.
T Consensus       250 ~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~-s~~p~~g~~f~Pkr  318 (568)
T PTZ00420        250 TTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYK-SCSPFRSFGFLPKQ  318 (568)
T ss_pred             CCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEeecccc-cCCCccceEEcccc
Confidence             3333222222 2223333344557999999999999999999887655444444 77889999999964

>KOG0639|consensus

Probab=99.96  E-value=1.5e-27  Score=212.87  Aligned_cols=284  Identities=19%  Similarity=0.261  Sum_probs=237.6

Q ss_pred             cccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC---eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEEC
Q psy15995        269 QEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA---DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI  345 (683)
Q Consensus       269 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  345 (683)
                      ..|..-|.++.++...+.+++|+ .|.|+|||+...   ..+..+........|.++.+.|||+.|++|+.-.++.|||+
T Consensus       416 L~HGEvVcAvtIS~~trhVyTgG-kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDL  494 (705)
T KOG0639|consen  416 LAHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDL  494 (705)
T ss_pred             hccCcEEEEEEecCCcceeEecC-CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeec
Confidence            35888899999999999999998 689999998653   23444443335678999999999999999999999999999


Q ss_pred             CCCceeeEEEe-cCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCC
Q psy15995        346 ETKSVVSEFIM-GNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDG  424 (683)
Q Consensus       346 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  424 (683)
                      ........... ........++.+++.+..+++..+|.|.+||+.+ ...++.+++|.+.+.|+.+++||..|-+|+-|+
T Consensus       495 AapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhn-q~~VrqfqGhtDGascIdis~dGtklWTGGlDn  573 (705)
T KOG0639|consen  495 AAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISKDGTKLWTGGLDN  573 (705)
T ss_pred             cCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEccc-ceeeecccCCCCCceeEEecCCCceeecCCCcc
Confidence            87665333322 2344567788899999999999999999999998 778899999999999999999999999999999


Q ss_pred             cEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEec
Q psy15995        425 FITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVK  504 (683)
Q Consensus       425 ~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (683)
                      +|+.||++++.......                                                               
T Consensus       574 tvRcWDlregrqlqqhd---------------------------------------------------------------  590 (705)
T KOG0639|consen  574 TVRCWDLREGRQLQQHD---------------------------------------------------------------  590 (705)
T ss_pred             ceeehhhhhhhhhhhhh---------------------------------------------------------------
Confidence            99999999877654331                                                               


Q ss_pred             eEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeC
Q psy15995        505 QISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDA  584 (683)
Q Consensus       505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  584 (683)
                                     +...|.++..+|.+.+|++|-+++.+.+-.....+..  ....|++-|.++.|++.|+++++.+.
T Consensus       591 ---------------F~SQIfSLg~cP~~dWlavGMens~vevlh~skp~ky--qlhlheScVLSlKFa~cGkwfvStGk  653 (705)
T KOG0639|consen  591 ---------------FSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKY--QLHLHESCVLSLKFAYCGKWFVSTGK  653 (705)
T ss_pred             ---------------hhhhheecccCCCccceeeecccCcEEEEecCCccce--eecccccEEEEEEecccCceeeecCc
Confidence                           2234677888999999999999999988877665543  22238899999999999999999999


Q ss_pred             CCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeC
Q psy15995        585 HRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSL  637 (683)
Q Consensus       585 d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~  637 (683)
                      |+-+..|...-|.-+....   ....|.++.+|.|.++++||+.|....||.+
T Consensus       654 DnlLnawrtPyGasiFqsk---E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  654 DNLLNAWRTPYGASIFQSK---ESSSVLSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             hhhhhhccCccccceeecc---ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence            9999999999887765444   6788999999999999999999998888875

>PTZ00420 coronin; Provisional

Probab=99.96  E-value=1.4e-25  Score=218.55  Aligned_cols=245  Identities=16%  Similarity=0.226  Sum_probs=186.8

Q ss_pred             EEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc--------eeeeccccccCeEEEEECC
Q psy15995        211 GHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK--------FKMTKQEHSRFVQAVRYSP  282 (683)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--------~~~~~~~~~~~v~~~~~~~  282 (683)
                      +.+|.......+..+.+|.+.|.+++|+|+...+|++|+.|++|++||+.+..        ....+.+|...|.+++|+|
T Consensus        56 I~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P  135 (568)
T PTZ00420         56 IRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNP  135 (568)
T ss_pred             EEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECC
Confidence            55666556667778899999999999999844469999999999999987542        2345678999999999999


Q ss_pred             CCCE-EEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcce
Q psy15995        283 SGSH-FASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVE  361 (683)
Q Consensus       283 ~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  361 (683)
                      ++.. |++++.|+.|++||+++++....+.   +...|.+++|+|+|++|++++.|+.|++||+++++.+.++.......
T Consensus       136 ~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~---~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~  212 (568)
T PTZ00420        136 MNYYIMCSSGFDSFVNIWDIENEKRAFQIN---MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGK  212 (568)
T ss_pred             CCCeEEEEEeCCCeEEEEECCCCcEEEEEe---cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCc
Confidence            9875 5788999999999999998777664   55789999999999999999999999999999999887775443321


Q ss_pred             ec-eE---EEEecCCEEEEEecCC----cEEEEecCCCCcceeeeeec--cccEEEEEEeCCCCEEEEEeCCCcEEEEcC
Q psy15995        362 DQ-QV---SCLWQGDYLLTVSLSG----FISYLDVNNPSTPIRVIKGH--NKPITALALSPDRGTVFTGSHDGFITRWNA  431 (683)
Q Consensus       362 ~~-~~---~~~~~~~~l~~~~~~g----~i~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~  431 (683)
                      .. .+   .+.++++++++++.++    .+++||++....++.....+  .+.+......+++.++++|+.|+.|++|++
T Consensus       213 ~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~  292 (568)
T PTZ00420        213 NTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQH  292 (568)
T ss_pred             eeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEc
Confidence            11 11   2236788899888774    79999999766666654432  233333434556888999999999999999


Q ss_pred             CCCCcceeccCCCCcceeEEEEeCCeE
Q psy15995        432 KTGENDRVQGAGHGNQINGMKATGELL  458 (683)
Q Consensus       432 ~~~~~~~~~~~~~~~~v~~~~~~~~~l  458 (683)
                      ..+.........+..+..++.+..+..
T Consensus       293 ~~~~~~~l~~~~s~~p~~g~~f~Pkr~  319 (568)
T PTZ00420        293 SLGSIRKVNEYKSCSPFRSFGFLPKQI  319 (568)
T ss_pred             cCCcEEeecccccCCCccceEEccccc
Confidence            877544433334556666777664443

>KOG1963|consensus

Probab=99.95  E-value=2.2e-24  Score=206.92  Aligned_cols=466  Identities=17%  Similarity=0.219  Sum_probs=311.4

Q ss_pred             ccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccc---eEEE
Q psy15995         81 YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIG---FYIA  157 (683)
Q Consensus        81 ~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~  157 (683)
                      +-|-...=....||+|+++++....+ .|.|+...+++++..++.+.              .++..+.+.|..   .++.
T Consensus        12 lgg~n~~~~~avfSnD~k~l~~~~~~-~V~VyS~~Tg~~i~~l~~~~--------------a~l~s~~~~~~~~~~~~~~   76 (792)
T KOG1963|consen   12 LGGRNGNKSPAVFSNDAKFLFLCTGN-FVKVYSTATGECITSLEDHT--------------APLTSVIVLPSSENANYLI   76 (792)
T ss_pred             eccccceecccccccCCcEEEEeeCC-EEEEEecchHhhhhhccccc--------------CccceeeecCCCccceEEE
Confidence            33444444456799999999887654 89999999999998777765              566666666643   4788


Q ss_pred             eecCCccEEEEeccccceeeeccccccCCCeeEEEEcCC---CCeEEEEecCCceEEEEEEccCCC-------------c
Q psy15995        158 SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPD---NQRMVVVGEGRERFGHVFMSETGT-------------S  221 (683)
Q Consensus       158 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~~~~~~~~~~~~~~~~-------------~  221 (683)
                      +++.+|.|++||...++.+......   .++..+.+.|.   ....+..+............+..+             .
T Consensus        77 ~~sl~G~I~vwd~~~~~Llkt~~~~---~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~  153 (792)
T KOG1963|consen   77 VCSLDGTIRVWDWSDGELLKTFDNN---LPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAK  153 (792)
T ss_pred             EEecCccEEEecCCCcEEEEEEecC---CceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccc
Confidence            9999999999999998876555443   45555555431   112222222211111111111111             1


Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeee----ccccccCeEEEEECCCCCEEEEEcCCCcEE
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT----KQEHSRFVQAVRYSPSGSHFASAGFDGKVF  297 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  297 (683)
                      ...+..|.. -..+.+++.+.  +.....+..+.+|..+.......    -..|...+++.+++|+++++|++..||+|.
T Consensus       154 ~d~~~~~~~-~~~I~~~~~ge--~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~  230 (792)
T KOG1963|consen  154 GDFLKEHQE-PKSIVDNNSGE--FKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRIL  230 (792)
T ss_pred             hhhhhhhcC-CccEEEcCCce--EEEEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEE
Confidence            111222322 46778888886  44444566788898776542111    124777799999999999999999999999


Q ss_pred             EEeCCC--C--eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCE
Q psy15995        298 LYDGAS--A--DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDY  373 (683)
Q Consensus       298 iw~~~~--~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (683)
                      +|.--.  +  .....+..  |...|.+++|+++|.+|++|+.++.+.+|.+.+++  +++                   
T Consensus       231 vw~d~~~~~~~~t~t~lHW--H~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~--kqf-------------------  287 (792)
T KOG1963|consen  231 VWRDFGSSDDSETCTLLHW--HHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK--KQF-------------------  287 (792)
T ss_pred             EEeccccccccccceEEEe--cccccceeEEecCCceEeecccceEEEEEeecCCC--ccc-------------------
Confidence            996322  1  12233333  88899999999999999999999999999999887  222                   


Q ss_pred             EEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEE
Q psy15995        374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKA  453 (683)
Q Consensus       374 l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~  453 (683)
                                              +..-.++|..+.++||+.+.+....|+.|.+....+.+.......        +.+
T Consensus       288 ------------------------LPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsg--------i~~  335 (792)
T KOG1963|consen  288 ------------------------LPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISG--------IKP  335 (792)
T ss_pred             ------------------------ccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccC--------ccC
Confidence                                    233467899999999999999999999999998766554433310        000


Q ss_pred             e-CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccC
Q psy15995        454 T-GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHE  532 (683)
Q Consensus       454 ~-~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  532 (683)
                      . ..+                                                           .-....-.+.++++|.
T Consensus       336 ~~~~~-----------------------------------------------------------k~~~~~l~t~~~idpr  356 (792)
T KOG1963|consen  336 PTPST-----------------------------------------------------------KTRPQSLTTGVSIDPR  356 (792)
T ss_pred             CCccc-----------------------------------------------------------cccccccceeEEEcCC
Confidence            0 000                                                           0001112356777887


Q ss_pred             CCEEEEEcCCCcEEEEEcCCCccCcceeec----------CCcCeeEEEECCCCCEEEEEe--------CC--CeEEEEE
Q psy15995        533 HGLVAVGGADSKVHIYELNNKSLSPKAELD----------HLGPVTDCSFSPSNEYLVASD--------AH--RKVVLYR  592 (683)
Q Consensus       533 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----------~~~~v~~~~~s~~~~~l~~~~--------~d--~~i~i~~  592 (683)
                      -+.++..+..|.|++||+.+...+......          +.-.+++++.+..|.++++..        .|  -.+++|.
T Consensus       357 ~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~  436 (792)
T KOG1963|consen  357 TNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQ  436 (792)
T ss_pred             CCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEE
Confidence            777888888899999999877655443321          233578888888999999874        22  3578887


Q ss_pred             CCCC----ccccccceeeecccEEEEEecC-C-CCeEEEeecCCcEEEEeCCCCcee--------eEeecCCCCCCeeEE
Q psy15995        593 VPDF----ELAHNKEWGFHSAKVNCVAWSP-D-SALVASGSLDTTIIIWSLASPAKH--------IIIKNAHPQSQITRL  658 (683)
Q Consensus       593 ~~~~----~~~~~~~~~~h~~~v~~~~~s~-d-~~~l~~~~~d~~v~iw~~~~~~~~--------~~~~~~~~~~~v~~l  658 (683)
                      ....    .+....... |...+...++.+ . ....++++.||.+++|-+...+..        +......|..+++++
T Consensus       437 ~n~~~kt~~L~T~I~~P-H~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~  515 (792)
T KOG1963|consen  437 YNPNSKTFILNTKINNP-HGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITAL  515 (792)
T ss_pred             EcCCcceeEEEEEEecC-CCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccch
Confidence            6542    222222223 777766666654 2 238999999999999998432221        222223378999999


Q ss_pred             EEccCCeEEEeeCCCcEEEEeecc
Q psy15995        659 QWLDNDLLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       659 ~~~~~~~l~s~~~d~~v~vw~~~~  682 (683)
                      +|+.++-+++++.|+.|.+|+..+
T Consensus       516 ~fs~dGslla~s~~~~Itiwd~~~  539 (792)
T KOG1963|consen  516 CFSQDGSLLAVSFDDTITIWDYDT  539 (792)
T ss_pred             hhcCCCcEEEEecCCEEEEecCCC
Confidence            999666888899999999999865

>KOG2096|consensus

Probab=99.95  E-value=4e-26  Score=191.90  Aligned_cols=299  Identities=18%  Similarity=0.257  Sum_probs=221.4

Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeee----ccccccCeEEEEECCCCCEEEE-EcCCCcE
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT----KQEHSRFVQAVRYSPSGSHFAS-AGFDGKV  296 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i  296 (683)
                      +..+++|.+.|++++|+.+|++ |++++.|++|++|+++.......    ..-.-+-.+.++|+||-+-++. .-...++
T Consensus        79 ~~~LKgH~~~vt~~~FsSdGK~-lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l  157 (420)
T KOG2096|consen   79 VSVLKGHKKEVTDVAFSSDGKK-LATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKL  157 (420)
T ss_pred             hhhhhccCCceeeeEEcCCCce-eEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEE
Confidence            4567899999999999999996 99999999999999877542211    1112235678999999885554 4445679


Q ss_pred             EEEeCCCCe---eEEe--------ccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceE
Q psy15995        297 FLYDGASAD---LVSE--------LGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQV  365 (683)
Q Consensus       297 ~iw~~~~~~---~~~~--------~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  365 (683)
                      ++|.+...+   ....        +. ..|.-.+..+-...+++++++++.|..|.+|++. |+.+..+. .........
T Consensus       158 ~vyk~~K~~dG~~~~~~v~~D~~~f~-~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~id-tnq~~n~~a  234 (420)
T KOG2096|consen  158 CVYKLVKKTDGSGSHHFVHIDNLEFE-RKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSID-TNQSSNYDA  234 (420)
T ss_pred             EEEEeeecccCCCCcccccccccccc-hhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeec-cccccccce
Confidence            999654321   1110        11 1266677788888889999999999999999999 77777654 334456677


Q ss_pred             EEEecCCEEEEEecCCcEEEEecCCCC-------cceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcce
Q psy15995        366 SCLWQGDYLLTVSLSGFISYLDVNNPS-------TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDR  438 (683)
Q Consensus       366 ~~~~~~~~l~~~~~~g~i~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~  438 (683)
                      +.+|+|+++++++....+.+|.+--..       ..+..+++|...|..++|+++...+++.+.||.+++||..-.-...
T Consensus       235 avSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~  314 (420)
T KOG2096|consen  235 AVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAG  314 (420)
T ss_pred             eeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecC
Confidence            889999999999999999999974321       2345688999999999999999999999999999999975321110


Q ss_pred             eccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeee
Q psy15995        439 VQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSL  518 (683)
Q Consensus       439 ~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  518 (683)
                      .-     ..+                  ++.                                          +. ....
T Consensus       315 qD-----pk~------------------Lk~------------------------------------------g~-~pl~  328 (420)
T KOG2096|consen  315 QD-----PKI------------------LKE------------------------------------------GS-APLH  328 (420)
T ss_pred             CC-----chH------------------hhc------------------------------------------CC-cchh
Confidence            00     000                  000                                          00 0000


Q ss_pred             cCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEE
Q psy15995        519 PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYR  592 (683)
Q Consensus       519 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~  592 (683)
                      .....+..++++|+++.||+... ..+++|..++++.......-|...|++++|+++|+++++++ |..++++.
T Consensus       329 aag~~p~RL~lsP~g~~lA~s~g-s~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~  400 (420)
T KOG2096|consen  329 AAGSEPVRLELSPSGDSLAVSFG-SDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIR  400 (420)
T ss_pred             hcCCCceEEEeCCCCcEEEeecC-CceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence            11224557899999999998755 56999999999888777777999999999999999999987 56777776

>KOG4283|consensus

Probab=99.95  E-value=4.1e-26  Score=189.62  Aligned_cols=317  Identities=20%  Similarity=0.295  Sum_probs=230.8

Q ss_pred             ccCcccceEEEEECC-CCcEEEEecCCCCEEEEeCCCcccccccccccCCC-CcccceeeeeecceeeeEeec-cceEEE
Q psy15995         81 YTEHSCAVNVAKYSP-SGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGG-PIKDIGTLLSLTSIRNILVLS-IGFYIA  157 (683)
Q Consensus        81 ~~~h~~~v~~~~~s~-d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~s~-~~~~l~  157 (683)
                      -..|.+.|+++.+.+ .|+|+++|+.||.|.+||+++......-....... .+.......+.-.|..+.|.| |...+.
T Consensus        39 ~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFt  118 (397)
T KOG4283|consen   39 VRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFT  118 (397)
T ss_pred             eccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceee
Confidence            346899999999998 88999999999999999998764221110000000 011111223446788888999 555888


Q ss_pred             eecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCC--eEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEE
Q psy15995        158 SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQ--RMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSC  235 (683)
Q Consensus       158 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  235 (683)
                      +++.|.++++||.++.+....+.+.   +.|.+-++||-..  .|++++ .++..+++.+...|..-+.+.+|.+.|.++
T Consensus       119 ssSFDhtlKVWDtnTlQ~a~~F~me---~~VYshamSp~a~sHcLiA~g-tr~~~VrLCDi~SGs~sH~LsGHr~~vlaV  194 (397)
T KOG4283|consen  119 SSSFDHTLKVWDTNTLQEAVDFKME---GKVYSHAMSPMAMSHCLIAAG-TRDVQVRLCDIASGSFSHTLSGHRDGVLAV  194 (397)
T ss_pred             cccccceEEEeecccceeeEEeecC---ceeehhhcChhhhcceEEEEe-cCCCcEEEEeccCCcceeeeccccCceEEE
Confidence            8999999999999998776666655   8899999999543  344333 334458999999999999999999999999


Q ss_pred             EeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEecc-CCc
Q psy15995        236 DFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG-NPA  314 (683)
Q Consensus       236 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~  314 (683)
                      .|+|...+.|++|+.||.|++||++..                              .|..++.|..+++....++ .++
T Consensus       195 ~Wsp~~e~vLatgsaDg~irlWDiRra------------------------------sgcf~~lD~hn~k~~p~~~~n~a  244 (397)
T KOG4283|consen  195 EWSPSSEWVLATGSADGAIRLWDIRRA------------------------------SGCFRVLDQHNTKRPPILKTNTA  244 (397)
T ss_pred             EeccCceeEEEecCCCceEEEEEeecc------------------------------cceeEEeecccCccCcccccccc
Confidence            999999999999999999999997532                              1222333333322222222 356


Q ss_pred             cccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeE-EEecCcceeceEEE---EecCCEEEEEecCCcEEEEecCC
Q psy15995        315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSE-FIMGNQVEDQQVSC---LWQGDYLLTVSLSGFISYLDVNN  390 (683)
Q Consensus       315 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~l~~~~~~g~i~~~~~~~  390 (683)
                      |.+.+..++|+.++.++++++.|..+++|+..+|+.... +-.........+.+   +.+...++..-.++.+.++.+-.
T Consensus       245 h~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~~lall~~~s  324 (397)
T KOG4283|consen  245 HYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDGSLALLNLLE  324 (397)
T ss_pred             ccceeeeeeecccchhhhhccCccceEEeecccCcccccccccccccccccceEEEeecccceEEEEecCCeEEEEEccC
Confidence            999999999999999999999999999999998764321 11111111111111   22344455555568888888887


Q ss_pred             CCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        391 PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       391 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                       ...++.+..|...+.|.++.|+-+...+|..|+.|..|-..
T Consensus       325 -gs~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p~  365 (397)
T KOG4283|consen  325 -GSFVRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWSPA  365 (397)
T ss_pred             -ceEEEeeecccceeeEEeecCchhhhhccccCCcccccccc
Confidence             56678889999999999999999999999999999999863

>KOG0301|consensus

Probab=99.95  E-value=3.7e-26  Score=212.42  Aligned_cols=284  Identities=17%  Similarity=0.262  Sum_probs=230.1

Q ss_pred             CcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceee-eEeec-c
Q psy15995         75 PAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRN-ILVLS-I  152 (683)
Q Consensus        75 ~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~-~  152 (683)
                      -++.+.+.||+..|..+++.++. .++++++||++++|+-..++.+....+...            ...+.. +++.+ +
T Consensus         4 Y~ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~------------~g~i~~~i~y~e~~   70 (745)
T KOG0301|consen    4 YKLSHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGKQYLETHAFEGP------------KGFIANSICYAESD   70 (745)
T ss_pred             ceeEEEeccCccchheeEecCCe-EEeecCCCCceeeeeccCcccccceecccC------------cceeeccceecccc
Confidence            35667899999999999977665 889999999999999766654432222211            133333 66664 4


Q ss_pred             ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCe
Q psy15995        153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPI  232 (683)
Q Consensus       153 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  232 (683)
                      +-+|++|+.|.++.+|...+..++  ..+.+|+..|.++....++. +++++-+.    .+..|..++....+.+|+..|
T Consensus        71 ~~~l~~g~~D~~i~v~~~~~~~P~--~~LkgH~snVC~ls~~~~~~-~iSgSWD~----TakvW~~~~l~~~l~gH~asV  143 (745)
T KOG0301|consen   71 KGRLVVGGMDTTIIVFKLSQAEPL--YTLKGHKSNVCSLSIGEDGT-LISGSWDS----TAKVWRIGELVYSLQGHTASV  143 (745)
T ss_pred             CcceEeecccceEEEEecCCCCch--hhhhccccceeeeecCCcCc-eEeccccc----ceEEecchhhhcccCCcchhe
Confidence            557999999999999999988855  66788999999999888887 77777774    566777788888899999999


Q ss_pred             EEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccC
Q psy15995        233 NSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN  312 (683)
Q Consensus       233 ~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  312 (683)
                      +++..-|++  .+++|+.|.+|++|..  ++.+.++.+|.+.|+.+++-+++. +++++.||.|++|++ +++.+.+...
T Consensus       144 WAv~~l~e~--~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~-flScsNDg~Ir~w~~-~ge~l~~~~g  217 (745)
T KOG0301|consen  144 WAVASLPEN--TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSH-FLSCSNDGSIRLWDL-DGEVLLEMHG  217 (745)
T ss_pred             eeeeecCCC--cEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCCC-eEeecCCceEEEEec-cCceeeeeec
Confidence            999999999  4999999999999985  778899999999999999999874 888999999999998 7888888765


Q ss_pred             CccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCC
Q psy15995        313 PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS  392 (683)
Q Consensus       313 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~  392 (683)
                        |..-++++....++..++++++|+++++|+..  .+.+.+                                      
T Consensus       218 --htn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I--------------------------------------  255 (745)
T KOG0301|consen  218 --HTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVI--------------------------------------  255 (745)
T ss_pred             --cceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEE--------------------------------------
Confidence              99999999988888999999999999999876  333332                                      


Q ss_pred             cceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCC
Q psy15995        393 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       393 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~  433 (683)
                            .-....|+++.+-++|. +++|+.||.|++|....
T Consensus       256 ------~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k  289 (745)
T KOG0301|consen  256 ------TLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDK  289 (745)
T ss_pred             ------ecCccceEEEEEeeCCC-EEEeccCceEEEEEecc
Confidence                  22234678888777764 67788899999998764

>KOG0646|consensus

Probab=99.95  E-value=1.9e-26  Score=204.29  Aligned_cols=302  Identities=18%  Similarity=0.249  Sum_probs=232.2

Q ss_pred             EecCCC-CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec-CCccEEEEeccccceeeec
Q psy15995        102 SGDISG-KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD-ISGKVRIWDTVNKEHILKN  179 (683)
Q Consensus       102 s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~  179 (683)
                      +++.|. .+.+||+.+|....+++......             -..+..- .+.|++++. ....+.+|.+.......  
T Consensus        12 ssS~d~~~~~~~dl~TGt~~~~ykg~~~a~-------------~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~--   75 (476)
T KOG0646|consen   12 SSSFDPINCIVWDLRTGTSLLQYKGSYLAQ-------------AASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVV--   75 (476)
T ss_pred             ccCCCCcceeEEecCCCceeEEecCccccc-------------chhhhhh-chhheeeecccCccccccccCchhhhh--
Confidence            444454 59999999998887776552100             0000011 124555554 44579999998765444  


Q ss_pred             cccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcC
Q psy15995        180 EFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG  259 (683)
Q Consensus       180 ~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~  259 (683)
                      ...-.++++.+++-+|+|.+|+.++..+.  +++|...+|..+..+..|-..|+++.|+.|+.+ +++|+.||.|.+|.+
T Consensus        76 q~~v~Pg~v~al~s~n~G~~l~ag~i~g~--lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~-iiTgskDg~V~vW~l  152 (476)
T KOG0646|consen   76 QYIVLPGPVHALASSNLGYFLLAGTISGN--LYLWELSSGILLNVLSAHYQSITCLKFSDDGSH-IITGSKDGAVLVWLL  152 (476)
T ss_pred             hhcccccceeeeecCCCceEEEeecccCc--EEEEEeccccHHHHHHhhccceeEEEEeCCCcE-EEecCCCccEEEEEE
Confidence            22234589999999999999998865544  799999999999999999999999999999996 999999999999963


Q ss_pred             C---------CCceeeeccccccCeEEEEECCCC--CEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCC
Q psy15995        260 P---------PFKFKMTKQEHSRFVQAVRYSPSG--SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDG  328 (683)
Q Consensus       260 ~---------~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  328 (683)
                      .         +-+....+..|.-+|+++...+.|  .++++++.|.++++||+..+..+..+.   ....+.+++.+|-+
T Consensus       153 ~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~---fp~si~av~lDpae  229 (476)
T KOG0646|consen  153 TDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT---FPSSIKAVALDPAE  229 (476)
T ss_pred             EeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe---cCCcceeEEEcccc
Confidence            2         345677888999999999998764  489999999999999999999998887   56789999999999


Q ss_pred             CEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccc--cEE
Q psy15995        329 TQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNK--PIT  406 (683)
Q Consensus       329 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~--~v~  406 (683)
                      +.+++|+.+|.|.+.++..-.....-.                          ..+.++..  ...+..+.+|.+  +|+
T Consensus       230 ~~~yiGt~~G~I~~~~~~~~~~~~~~v--------------------------~~k~~~~~--~t~~~~~~Gh~~~~~IT  281 (476)
T KOG0646|consen  230 RVVYIGTEEGKIFQNLLFKLSGQSAGV--------------------------NQKGRHEE--NTQINVLVGHENESAIT  281 (476)
T ss_pred             cEEEecCCcceEEeeehhcCCcccccc--------------------------cccccccc--cceeeeeccccCCccee
Confidence            999999999999998876543211100                          00001111  334556778887  999


Q ss_pred             EEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe
Q psy15995        407 ALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT  454 (683)
Q Consensus       407 ~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~  454 (683)
                      |++++-||..|++|+.||.|++||+.+.++++.... ..++|+.+.+.
T Consensus       282 cLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~-~kgpVtnL~i~  328 (476)
T KOG0646|consen  282 CLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQT-SKGPVTNLQIN  328 (476)
T ss_pred             EEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhh-hccccceeEee
Confidence            999999999999999999999999999998887742 56777777763

>KOG1036|consensus

Probab=99.95  E-value=1.3e-25  Score=188.38  Aligned_cols=279  Identities=22%  Similarity=0.300  Sum_probs=218.4

Q ss_pred             CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy15995        228 QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLV  307 (683)
Q Consensus       228 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~  307 (683)
                      ..+.|..+.|+|.+.. |++++.||++++|+.........+. |..++.+++|.++. .+++|+.||.|+.+|+.+++..
T Consensus        12 P~d~IS~v~f~~~~~~-LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d~~-~~~~G~~dg~vr~~Dln~~~~~   88 (323)
T KOG1036|consen   12 PEDGISSVKFSPSSSD-LLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFADES-TIVTGGLDGQVRRYDLNTGNED   88 (323)
T ss_pred             ChhceeeEEEcCcCCc-EEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccCCc-eEEEeccCceEEEEEecCCcce
Confidence            3567999999998886 7888899999999998886555554 88999999999854 6899999999999999988776


Q ss_pred             EeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEe
Q psy15995        308 SELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLD  387 (683)
Q Consensus       308 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~  387 (683)
                      ....   |..+|.++.+++....+++|+.|++|++||.+.......+....    ...+.+-.++.|++|+.+..+.+||
T Consensus        89 ~igt---h~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~k----kVy~~~v~g~~LvVg~~~r~v~iyD  161 (323)
T KOG1036|consen   89 QIGT---HDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGK----KVYCMDVSGNRLVVGTSDRKVLIYD  161 (323)
T ss_pred             eecc---CCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCc----eEEEEeccCCEEEEeecCceEEEEE
Confidence            5544   99999999999988899999999999999999755444433222    5556666899999999999999999


Q ss_pred             cCCCCcceeee-eeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceecc---CCCCcceeEEEEeCCeEEEEEc
Q psy15995        388 VNNPSTPIRVI-KGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQG---AGHGNQINGMKATGELLYTCGI  463 (683)
Q Consensus       388 ~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~---~~~~~~v~~~~~~~~~l~~~~~  463 (683)
                      +++...+.+.. ..-+-.+.++++-|++.-.++++-||.|.+=.+...+......   ..|...               .
T Consensus       162 LRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~---------------~  226 (323)
T KOG1036|consen  162 LRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLS---------------E  226 (323)
T ss_pred             cccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecc---------------c
Confidence            99876655322 2345678999999998889999999999887666552211110   111100               0


Q ss_pred             CCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCC
Q psy15995        464 DDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADS  543 (683)
Q Consensus       464 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg  543 (683)
                      ++                                                    ...-.++.+++|+|-.+.+|+|+.||
T Consensus       227 ~~----------------------------------------------------~~~~yPVNai~Fhp~~~tfaTgGsDG  254 (323)
T KOG1036|consen  227 KD----------------------------------------------------TEIIYPVNAIAFHPIHGTFATGGSDG  254 (323)
T ss_pred             CC----------------------------------------------------ceEEEEeceeEeccccceEEecCCCc
Confidence            00                                                    01224689999999999999999999


Q ss_pred             cEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeC
Q psy15995        544 KVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDA  584 (683)
Q Consensus       544 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  584 (683)
                      .|.+||+.+.+.+..+. .....|.+++|+.||..||.++.
T Consensus       255 ~V~~Wd~~~rKrl~q~~-~~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  255 IVNIWDLFNRKRLKQLA-KYETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             eEEEccCcchhhhhhcc-CCCCceEEEEeccCCCeEEEEec
Confidence            99999999887764443 34577999999999999999874

>KOG0646|consensus

Probab=99.95  E-value=3.5e-26  Score=202.60  Aligned_cols=292  Identities=18%  Similarity=0.214  Sum_probs=218.9

Q ss_pred             EEEEEEccCCCceeeeecC-CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEE
Q psy15995        210 FGHVFMSETGTSVGEISGQ-SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFA  288 (683)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  288 (683)
                      ...+|+..+|.....+++. ...-.++..-. +.+.+.+-.....+.+|.+...........-.++|.+++-+|+|.+|+
T Consensus        19 ~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l~-~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~   97 (476)
T KOG0646|consen   19 NCIVWDLRTGTSLLQYKGSYLAQAASLTALN-NEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFLL   97 (476)
T ss_pred             ceeEEecCCCceeEEecCcccccchhhhhhc-hhheeeecccCccccccccCchhhhhhhcccccceeeeecCCCceEEE
Confidence            3678888888888777765 22222222211 234455555567899999766555543444577899999999999999


Q ss_pred             EEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEE
Q psy15995        289 SAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCL  368 (683)
Q Consensus       289 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  368 (683)
                      .|+..|.|++|.+.+|..+..+..  |-..|+++.|+-|+.+|++++.||.|.+|.+..--.                  
T Consensus        98 ag~i~g~lYlWelssG~LL~v~~a--HYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~------------------  157 (476)
T KOG0646|consen   98 AGTISGNLYLWELSSGILLNVLSA--HYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVS------------------  157 (476)
T ss_pred             eecccCcEEEEEeccccHHHHHHh--hccceeEEEEeCCCcEEEecCCCccEEEEEEEeecc------------------
Confidence            998999999999999999999865  999999999999999999999999999998753210                  


Q ss_pred             ecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCC--CCEEEEEeCCCcEEEEcCCCCCcceeccCCCCc
Q psy15995        369 WQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPD--RGTVFTGSHDGFITRWNAKTGENDRVQGAGHGN  446 (683)
Q Consensus       369 ~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~  446 (683)
                              ...++         .-.+...+..|.-+|+++...+.  ..++++++.|.++++||+..+..+....     
T Consensus       158 --------a~~~~---------~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-----  215 (476)
T KOG0646|consen  158 --------ADNDH---------SVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-----  215 (476)
T ss_pred             --------cccCC---------CccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-----
Confidence                    00000         14566788899999999998765  4689999999999999998876554432     


Q ss_pred             ceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcE
Q psy15995        447 QINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSS  526 (683)
Q Consensus       447 ~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  526 (683)
                                                                                               .+..+.+
T Consensus       216 -------------------------------------------------------------------------fp~si~a  222 (476)
T KOG0646|consen  216 -------------------------------------------------------------------------FPSSIKA  222 (476)
T ss_pred             -------------------------------------------------------------------------cCCccee
Confidence                                                                                     2234667


Q ss_pred             EEEccCCCEEEEEcCCCcEEEEEcCCCccC---------------cceeecCCc--CeeEEEECCCCCEEEEEeCCCeEE
Q psy15995        527 ISLDHEHGLVAVGGADSKVHIYELNNKSLS---------------PKAELDHLG--PVTDCSFSPSNEYLVASDAHRKVV  589 (683)
Q Consensus       527 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---------------~~~~~~~~~--~v~~~~~s~~~~~l~~~~~d~~i~  589 (683)
                      ++++|.++.+++|+++|.|.+.++......               .....+|.+  +|+|++.+-||..|++|+.||.++
T Consensus       223 v~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~Vc  302 (476)
T KOG0646|consen  223 VALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVC  302 (476)
T ss_pred             EEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEE
Confidence            777777777777777777777666433210               112235666  999999999999999999999999


Q ss_pred             EEECCCCccccccceeeecccEEEEEecCC
Q psy15995        590 LYRVPDFELAHNKEWGFHSAKVNCVAWSPD  619 (683)
Q Consensus       590 i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d  619 (683)
                      |||+.+.+++.....  ..++|+.+.+.|-
T Consensus       303 vWdi~S~Q~iRtl~~--~kgpVtnL~i~~~  330 (476)
T KOG0646|consen  303 VWDIYSKQCIRTLQT--SKGPVTNLQINPL  330 (476)
T ss_pred             EEecchHHHHHHHhh--hccccceeEeecc
Confidence            999999988876552  3578999998664

>KOG2055|consensus

Probab=99.95  E-value=6.1e-26  Score=200.59  Aligned_cols=287  Identities=17%  Similarity=0.276  Sum_probs=224.9

Q ss_pred             ccCeEEEEECCCCCEEEEEcCCCcEEEEeCCC--CeeEEeccCCccccCeEEEEEccCCC-EEEEEECCCcEEEEECCCC
Q psy15995        272 SRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS--ADLVSELGNPAHKGGVYAVAWKPDGT-QLLTASGDKTCKLWDIETK  348 (683)
Q Consensus       272 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~  348 (683)
                      .+.|+++.|+|....+++++.|+.+++|.+..  ...++.+..  ...+|.+.+|.|+|. .+++++....++.||+.+.
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l--~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~a  290 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHL--EKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETA  290 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeee--ccCccceeeecCCCceEEEecccceEEEEeecccc
Confidence            46799999999999999999999999997654  345666655  778999999999999 8999999999999999987


Q ss_pred             ceeeEEEec--CcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcE
Q psy15995        349 SVVSEFIMG--NQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFI  426 (683)
Q Consensus       349 ~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  426 (683)
                      +....-...  .......+.+++++++++..+..|.|.+....+ .+.+..++ -.+.|..++|+.+++.|++++.+|.|
T Consensus       291 k~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT-~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV  368 (514)
T KOG2055|consen  291 KVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKT-KELITSFK-IEGVVSDFTFSSDSKELLASGGTGEV  368 (514)
T ss_pred             ccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhh-hhhhheee-eccEEeeEEEecCCcEEEEEcCCceE
Confidence            764433222  223456778889999999999999999998877 44444444 36789999999999999999999999


Q ss_pred             EEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceE
Q psy15995        427 TRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQI  506 (683)
Q Consensus       427 ~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (683)
                      .+||++...++.....                     +|.+                                       
T Consensus       369 ~v~nl~~~~~~~rf~D---------------------~G~v---------------------------------------  388 (514)
T KOG2055|consen  369 YVWNLRQNSCLHRFVD---------------------DGSV---------------------------------------  388 (514)
T ss_pred             EEEecCCcceEEEEee---------------------cCcc---------------------------------------
Confidence            9999998766554421                     1111                                       


Q ss_pred             EEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCC----ccCccee-ecCCcCeeEEEECCCCCEEEE
Q psy15995        507 SIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNK----SLSPKAE-LDHLGPVTDCSFSPSNEYLVA  581 (683)
Q Consensus       507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~-~~~~~~v~~~~~s~~~~~l~~  581 (683)
                                      .-+++|.++++.++|+|+..|.|.|||.++.    .+.+... ..-...|+++.|+||.+.||.
T Consensus       389 ----------------~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAi  452 (514)
T KOG2055|consen  389 ----------------HGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAI  452 (514)
T ss_pred             ----------------ceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhh
Confidence                            1367888999999999999999999997543    2222222 225567999999999999998


Q ss_pred             Ee--CCCeEEEEECCCCcccccccee-eecccEEEEEecCCCCeEEEeecCCcEEEEeCC
Q psy15995        582 SD--AHRKVVLYRVPDFELAHNKEWG-FHSAKVNCVAWSPDSALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       582 ~~--~d~~i~i~~~~~~~~~~~~~~~-~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~  638 (683)
                      ++  ....+++-.+++.......... ..-+.|+||+|||.+.+||.|.++|.|.+|.+.
T Consensus       453 aS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  453 ASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             hhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence            77  4567999998876654332221 133569999999999999999999999999874

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.95  E-value=8.6e-25  Score=207.89  Aligned_cols=276  Identities=14%  Similarity=0.151  Sum_probs=207.5

Q ss_pred             eEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEE-EEecCCCCEEEEeCCCcccccccccccCCCCcccc
Q psy15995         58 NFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDI  135 (683)
Q Consensus        58 ~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l-as~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  135 (683)
                      .++++ .++.|.+||.++++....+.+|.. +.+++|+|+|+++ ++++.++.|++||..+++....+..+         
T Consensus         3 ~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~---------   72 (300)
T TIGR03866         3 AYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSG---------   72 (300)
T ss_pred             EEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCC---------
Confidence            44444 588999999999998888876654 6789999999877 56778899999999988765544332         


Q ss_pred             eeeeeecceeeeEeeccceEEEee-cCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEE
Q psy15995        136 GTLLSLTSIRNILVLSIGFYIASG-DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF  214 (683)
Q Consensus       136 ~~~~~~~~i~~~~~s~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~  214 (683)
                            ..+..++++|+++.++++ ..++.+++||+.+++.+.....   ...+.+++|+|+++.++++..+.. ...++
T Consensus        73 ------~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~---~~~~~~~~~~~dg~~l~~~~~~~~-~~~~~  142 (300)
T TIGR03866        73 ------PDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV---GVEPEGMAVSPDGKIVVNTSETTN-MAHFI  142 (300)
T ss_pred             ------CCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC---CCCcceEEECCCCCEEEEEecCCC-eEEEE
Confidence                  234567899999877654 5689999999998765443321   245688999999999988876543 24556


Q ss_pred             EccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccc-------cCeEEEEECCCCCEE
Q psy15995        215 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS-------RFVQAVRYSPSGSHF  287 (683)
Q Consensus       215 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l  287 (683)
                      +.++++....+.. ......++|+|+++.+++++..++.|++||.++++....+..+.       .....++|+|+++.+
T Consensus       143 d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~  221 (300)
T TIGR03866       143 DTKTYEIVDNVLV-DQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTA  221 (300)
T ss_pred             eCCCCeEEEEEEc-CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEE
Confidence            7666665544432 33457899999999745666679999999999887766553221       123568899999975


Q ss_pred             EEE-cCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEE-ECCCcEEEEECCCCceeeEEEec
Q psy15995        288 ASA-GFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA-SGDKTCKLWDIETKSVVSEFIMG  357 (683)
Q Consensus       288 ~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~  357 (683)
                      +++ +.++.+.+||.++++....+.   +...+.+++|+|++++|+++ ..++.|++||+++++.+.++..+
T Consensus       222 ~~~~~~~~~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~  290 (300)
T TIGR03866       222 FVALGPANRVAVVDAKTYEVLDYLL---VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG  290 (300)
T ss_pred             EEEcCCCCeEEEEECCCCcEEEEEE---eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc
Confidence            543 456789999999888776553   44578999999999999886 45899999999999998888654

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0301|consensus

Probab=99.95  E-value=1e-25  Score=209.49  Aligned_cols=271  Identities=11%  Similarity=0.174  Sum_probs=231.0

Q ss_pred             CeEEEeeCCCCCeEEEecCCeEEEEeCCCCccc--ccccCcccceEE-EEECC-CCcEEEEecCCCCEEEEeCCCccccc
Q psy15995         46 QPIVLGGDPKGKNFLYTNGNSVIIRNIENPAIS--DIYTEHSCAVNV-AKYSP-SGFYIASGDISGKVRIWDTVNKEHIL  121 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~--~~~~~h~~~v~~-~~~s~-d~~~las~~~dg~i~iwd~~~~~~~~  121 (683)
                      .+..+++.+....+..+.++++.+|+-..++.+  +.+.+|.+-|.+ ++|-+ |+-+|++|+.|..|.+|.+.+..++.
T Consensus        16 DVr~v~~~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~   95 (745)
T KOG0301|consen   16 DVRAVAVTDGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLY   95 (745)
T ss_pred             chheeEecCCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchh
Confidence            344555566555555566899999998766654  347788888888 88886 55679999999999999999999999


Q ss_pred             ccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEE
Q psy15995        122 KNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMV  201 (683)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  201 (683)
                      .+..|.              ..|.++....++. +++|+.|.++++|.....    .....+|...|.++++-|++ .++
T Consensus        96 ~LkgH~--------------snVC~ls~~~~~~-~iSgSWD~TakvW~~~~l----~~~l~gH~asVWAv~~l~e~-~~v  155 (745)
T KOG0301|consen   96 TLKGHK--------------SNVCSLSIGEDGT-LISGSWDSTAKVWRIGEL----VYSLQGHTASVWAVASLPEN-TYV  155 (745)
T ss_pred             hhhccc--------------cceeeeecCCcCc-eEecccccceEEecchhh----hcccCCcchheeeeeecCCC-cEE
Confidence            999997              7888888888887 999999999999988653    34588999999999999998 566


Q ss_pred             EEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEEC
Q psy15995        202 VVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYS  281 (683)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~  281 (683)
                      +++.++    .+..|+.++.++++.+|.+.|+.+++-+++.  +++++.||.|+.|++ +++.+..+.+|+..|.++...
T Consensus       156 TgsaDK----tIklWk~~~~l~tf~gHtD~VRgL~vl~~~~--flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~  228 (745)
T KOG0301|consen  156 TGSADK----TIKLWKGGTLLKTFSGHTDCVRGLAVLDDSH--FLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMA  228 (745)
T ss_pred             eccCcc----eeeeccCCchhhhhccchhheeeeEEecCCC--eEeecCCceEEEEec-cCceeeeeeccceEEEEEEec
Confidence            666663    6777888999999999999999999999975  999999999999998 889999999999999999988


Q ss_pred             CCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCC
Q psy15995        282 PSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETK  348 (683)
Q Consensus       282 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  348 (683)
                      +++..++++++|+++++|+..  ++.+.+..  ....|.++.+-++|. +++|+.||.|++|..+..
T Consensus       229 ~~~~~Ivs~gEDrtlriW~~~--e~~q~I~l--PttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k~  290 (745)
T KOG0301|consen  229 LSDGLIVSTGEDRTLRIWKKD--ECVQVITL--PTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDKD  290 (745)
T ss_pred             CCCCeEEEecCCceEEEeecC--ceEEEEec--CccceEEEEEeeCCC-EEEeccCceEEEEEeccc
Confidence            888899999999999999965  78888875  445899999988887 788889999999987643

>KOG2055|consensus

Probab=99.95  E-value=2e-25  Score=197.43  Aligned_cols=290  Identities=18%  Similarity=0.290  Sum_probs=241.2

Q ss_pred             CCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce
Q psy15995        185 GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF  264 (683)
Q Consensus       185 ~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  264 (683)
                      .+.|+++.|+|....+++++-++...++-.+-+....+..+.-...+|.+++|.|+|...+++++....++.||+.+.+.
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~  292 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV  292 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence            47899999999999999999887755555555567788888888999999999999997799999999999999988775


Q ss_pred             eee--cccc-ccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEE
Q psy15995        265 KMT--KQEH-SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCK  341 (683)
Q Consensus       265 ~~~--~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  341 (683)
                      ...  ..++ ...+.....+|++++|+..+..|.|.+....+++.+..+.   -.+.|..++|+.|++.|++++.+|.|.
T Consensus       293 ~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K---ieG~v~~~~fsSdsk~l~~~~~~GeV~  369 (514)
T KOG2055|consen  293 TKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK---IEGVVSDFTFSSDSKELLASGGTGEVY  369 (514)
T ss_pred             ccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee---eccEEeeEEEecCCcEEEEEcCCceEE
Confidence            443  2233 3457788999999999999999999999999999999987   677899999999999999999999999


Q ss_pred             EEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCC-----CCcceeeeeeccccEEEEEEeCCCCE
Q psy15995        342 LWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN-----PSTPIRVIKGHNKPITALALSPDRGT  416 (683)
Q Consensus       342 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~  416 (683)
                      +||++...++.++..........++.+.++.++++|+..|.|.+||..+     ..+|+..+..-...|++++|+||.+.
T Consensus       370 v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qi  449 (514)
T KOG2055|consen  370 VWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQI  449 (514)
T ss_pred             EEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhh
Confidence            9999999999999998888888999999999999999999999999653     34566667677788999999999999


Q ss_pred             EEEEeC--CCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeec
Q psy15995        417 VFTGSH--DGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDID  494 (683)
Q Consensus       417 l~~~~~--dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (683)
                      |+.++.  ...+++-.+.+......++.. .                                                 
T Consensus       450 LAiaS~~~knalrLVHvPS~TVFsNfP~~-n-------------------------------------------------  479 (514)
T KOG2055|consen  450 LAIASRVKKNALRLVHVPSCTVFSNFPTS-N-------------------------------------------------  479 (514)
T ss_pred             hhhhhhccccceEEEeccceeeeccCCCC-C-------------------------------------------------
Confidence            997775  445666655543332222110 0                                                 


Q ss_pred             CCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcC
Q psy15995        495 ENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELN  551 (683)
Q Consensus       495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~  551 (683)
                                              ..-..++|++|+|.+.+||+|..+|.+.+|.+.
T Consensus       480 ------------------------~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  480 ------------------------TKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             ------------------------CcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence                                    011357999999999999999999999999864

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.95  E-value=2.8e-24  Score=204.36  Aligned_cols=285  Identities=17%  Similarity=0.185  Sum_probs=210.1

Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEE-EEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEE
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHF-ASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAV  322 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~  322 (683)
                      ++++++.|+.+++||..+++....+..+. .+.+++|+|+++.+ ++++.++.|++||..+++....+..  + ..+..+
T Consensus         3 ~~~s~~~d~~v~~~d~~t~~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~-~~~~~~   78 (300)
T TIGR03866         3 AYVSNEKDNTISVIDTATLEVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPS--G-PDPELF   78 (300)
T ss_pred             EEEEecCCCEEEEEECCCCceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccC--C-CCccEE
Confidence            58899999999999999998888877654 46789999999976 5667789999999999888776643  3 335678


Q ss_pred             EEccCCCEEEEE-ECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeec
Q psy15995        323 AWKPDGTQLLTA-SGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGH  401 (683)
Q Consensus       323 ~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~  401 (683)
                      +|+|+++.++++ ..++.+++||+++.+.+..+.                                             +
T Consensus        79 ~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~---------------------------------------------~  113 (300)
T TIGR03866        79 ALHPNGKILYIANEDDNLVTVIDIETRKVLAEIP---------------------------------------------V  113 (300)
T ss_pred             EECCCCCEEEEEcCCCCeEEEEECCCCeEEeEee---------------------------------------------C
Confidence            999999977655 458899999998765543321                                             1


Q ss_pred             cccEEEEEEeCCCCEEEEEeCCC-cEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCC
Q psy15995        402 NKPITALALSPDRGTVFTGSHDG-FITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGP  480 (683)
Q Consensus       402 ~~~v~~~~~~~~~~~l~~~~~dg-~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~  480 (683)
                      ...+.+++|+|+++++++++.++ .+..||..+++......                                       
T Consensus       114 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~---------------------------------------  154 (300)
T TIGR03866       114 GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVL---------------------------------------  154 (300)
T ss_pred             CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEE---------------------------------------
Confidence            12356789999999999888765 45667765543321110                                       


Q ss_pred             ceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEc-CCCcEEEEEcCCCccCcce
Q psy15995        481 EVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGG-ADSKVHIYELNNKSLSPKA  559 (683)
Q Consensus       481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~  559 (683)
                                                             ....+..++++|+++++++++ .++.|++||+.+++.....
T Consensus       155 ---------------------------------------~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~  195 (300)
T TIGR03866       155 ---------------------------------------VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKI  195 (300)
T ss_pred             ---------------------------------------cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeee
Confidence                                                   011245688999999886554 5899999999987654433


Q ss_pred             eec----C--CcCeeEEEECCCCCEEEEE-eCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEe-ecCCc
Q psy15995        560 ELD----H--LGPVTDCSFSPSNEYLVAS-DAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASG-SLDTT  631 (683)
Q Consensus       560 ~~~----~--~~~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~-~~d~~  631 (683)
                      ...    +  ......++|+|++++++++ ..++.+.+||+.+++......   +...+.+++|+|+|++|+++ +.++.
T Consensus       196 ~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~~~~~~  272 (300)
T TIGR03866       196 TFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL---VGQRVWQLAFTPDEKYLLTTNGVSND  272 (300)
T ss_pred             eecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE---eCCCcceEEECCCCCEEEEEcCCCCe
Confidence            221    1  1124568899999986554 556789999999887754332   45679999999999999886 46899


Q ss_pred             EEEEeCCCCceeeEeecCCCCCCeeEEEEc
Q psy15995        632 IIIWSLASPAKHIIIKNAHPQSQITRLQWL  661 (683)
Q Consensus       632 v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~  661 (683)
                      |++||+.+++.+..+..   ....+.++++
T Consensus       273 i~v~d~~~~~~~~~~~~---~~~~~~~~~~  299 (300)
T TIGR03866       273 VSVIDVAALKVIKSIKV---GRLPWGVVVR  299 (300)
T ss_pred             EEEEECCCCcEEEEEEc---ccccceeEeC
Confidence            99999999998888865   3556787764

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1332|consensus

Probab=99.95  E-value=2.3e-26  Score=185.83  Aligned_cols=256  Identities=21%  Similarity=0.291  Sum_probs=202.7

Q ss_pred             cccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc---cccccccccCCCCcccceeeeeecceeeeEeec--cce
Q psy15995         80 IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE---HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS--IGF  154 (683)
Q Consensus        80 ~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~  154 (683)
                      .-..|++.|..+...-.|++|||++.|++|+|+.+.+..   .+.++.+|.              .++..++|..  .|.
T Consensus         6 idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~--------------GPVwqv~wahPk~G~   71 (299)
T KOG1332|consen    6 IDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHS--------------GPVWKVAWAHPKFGT   71 (299)
T ss_pred             hhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCC--------------CCeeEEeecccccCc
Confidence            345799999999999999999999999999999997654   455566665              7788888887  899


Q ss_pred             EEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEE
Q psy15995        155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINS  234 (683)
Q Consensus       155 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  234 (683)
                      .||+++.||.|.||.-++++-........|...|++++|.|.+--                                   
T Consensus        72 iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheyg-----------------------------------  116 (299)
T KOG1332|consen   72 ILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYG-----------------------------------  116 (299)
T ss_pred             EeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccc-----------------------------------
Confidence            999999999999999998865556666677777777777775422                                   


Q ss_pred             EEeecCCCeEEEEeeCCCeEEEEcCCCC---ceeeeccccccCeEEEEECCC---C-----------CEEEEEcCCCcEE
Q psy15995        235 CDFKPSRPFRIITGSEDNTIAVFEGPPF---KFKMTKQEHSRFVQAVRYSPS---G-----------SHFASAGFDGKVF  297 (683)
Q Consensus       235 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~---~-----------~~l~~~~~dg~i~  297 (683)
                              +.|++++.||.|.|.+.+..   ........|.-.|++++|.|.   |           +.|++|+.|..|+
T Consensus       117 --------l~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~Vk  188 (299)
T KOG1332|consen  117 --------LLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVK  188 (299)
T ss_pred             --------eEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCcccee
Confidence                    24888899999999876544   233445679999999999996   4           5699999999999


Q ss_pred             EEeCCCCeeEEeccCCccccCeEEEEEccCC----CEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCE
Q psy15995        298 LYDGASADLVSELGNPAHKGGVYAVAWKPDG----TQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDY  373 (683)
Q Consensus       298 iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (683)
                      ||+..+++.+..-...+|.+.|..++|.|.-    ..+++++.||++.||..+......+                    
T Consensus       189 iW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk--------------------  248 (299)
T KOG1332|consen  189 IWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWK--------------------  248 (299)
T ss_pred             eeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCccc--------------------
Confidence            9999887554443345599999999999954    4799999999999998763211111                    


Q ss_pred             EEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCC
Q psy15995        374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       374 l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~  433 (683)
                                           ...+......+..+.|+..|+.|++++.|+.|.+|.-..
T Consensus       249 ---------------------~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~  287 (299)
T KOG1332|consen  249 ---------------------KTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV  287 (299)
T ss_pred             ---------------------ccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence                                 122334567899999999999999999999999997543

>KOG1332|consensus

Probab=99.94  E-value=8.4e-26  Score=182.63  Aligned_cols=249  Identities=22%  Similarity=0.351  Sum_probs=193.1

Q ss_pred             ccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCc
Q psy15995        314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPST  393 (683)
Q Consensus       314 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~  393 (683)
                      .|...|..+...--|++|++++.|++|+|+..++...                                         ..
T Consensus         9 ~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~-----------------------------------------s~   47 (299)
T KOG1332|consen    9 QHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQ-----------------------------------------SK   47 (299)
T ss_pred             hhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCC-----------------------------------------ce
Confidence            3788888887777789999999999999998886653                                         13


Q ss_pred             ceeeeeeccccEEEEEEeC--CCCEEEEEeCCCcEEEEcCCCCCcceecc-CCCCcceeEEEEeCCeEEEEEcCCeEEEE
Q psy15995        394 PIRVIKGHNKPITALALSP--DRGTVFTGSHDGFITRWNAKTGENDRVQG-AGHGNQINGMKATGELLYTCGIDDTIKQV  470 (683)
Q Consensus       394 ~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~w~~~~~~~~~~~~-~~~~~~v~~~~~~~~~l~~~~~d~~i~~~  470 (683)
                      ++..+.+|.++|..++|..  .|..|++++.||.|.||.-.+++..+... ..|...|+                     
T Consensus        48 ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVN---------------------  106 (299)
T KOG1332|consen   48 LLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVN---------------------  106 (299)
T ss_pred             eeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccce---------------------
Confidence            3467899999999999976  89999999999999999988875443322 23444444                     


Q ss_pred             eCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccC--CCEEEEEcCCCcEEEE
Q psy15995        471 DLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHE--HGLVAVGGADSKVHIY  548 (683)
Q Consensus       471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~dg~i~i~  548 (683)
                                                                             ++++.|.  |-.|++++.||.|.+.
T Consensus       107 -------------------------------------------------------sV~wapheygl~LacasSDG~vsvl  131 (299)
T KOG1332|consen  107 -------------------------------------------------------SVAWAPHEYGLLLACASSDGKVSVL  131 (299)
T ss_pred             -------------------------------------------------------eecccccccceEEEEeeCCCcEEEE
Confidence                                                                   4444443  4577888888888888


Q ss_pred             EcCCC--ccCcceeecCCcCeeEEEECCC---C-----------CEEEEEeCCCeEEEEECCCCccccccceeeecccEE
Q psy15995        549 ELNNK--SLSPKAELDHLGPVTDCSFSPS---N-----------EYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVN  612 (683)
Q Consensus       549 d~~~~--~~~~~~~~~~~~~v~~~~~s~~---~-----------~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~  612 (683)
                      ++++.  -...+....|.-.|++++|.|-   |           +.|++|+.|..|+||+..+++......+.+|.+.|+
T Consensus       132 ~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVR  211 (299)
T KOG1332|consen  132 TYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVR  211 (299)
T ss_pred             EEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhh
Confidence            77654  2223344458888999999885   5           679999999999999999987766666777999999


Q ss_pred             EEEecCCC----CeEEEeecCCcEEEEeCCCCcee--eEeecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEee
Q psy15995        613 CVAWSPDS----ALVASGSLDTTIIIWSLASPAKH--IIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       613 ~~~~s~d~----~~l~~~~~d~~v~iw~~~~~~~~--~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~  680 (683)
                      .++|.|.-    ..||+++.||+|.||..+.....  ..+... -...+..+.|+ .++.|+.++.|+.|.+|.=
T Consensus       212 DVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~-f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke  285 (299)
T KOG1332|consen  212 DVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEE-FPDVVWRVSWSLSGNILAVSGGDNKVTLWKE  285 (299)
T ss_pred             hhhhccccCCCceeeEEecCCCcEEEEEecCccCccccccccc-CCcceEEEEEeccccEEEEecCCcEEEEEEe
Confidence            99999964    57999999999999987743222  222111 35789999999 8889999999999999974

>KOG0650|consensus

Probab=99.94  E-value=8.5e-26  Score=206.23  Aligned_cols=297  Identities=17%  Similarity=0.306  Sum_probs=230.2

Q ss_pred             ccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccce--EE
Q psy15995         79 DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF--YI  156 (683)
Q Consensus        79 ~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l  156 (683)
                      ..+.||++.|.||...|.|.+||+|+.||+|+||.+.+++++.+..+.               ..|.+++|+|.+.  .|
T Consensus       394 lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d---------------~~I~~vaw~P~~~~~vL  458 (733)
T KOG0650|consen  394 LVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFD---------------SEIRSVAWNPLSDLCVL  458 (733)
T ss_pred             eeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeec---------------ceeEEEEecCCCCceeE
Confidence            347799999999999999999999999999999999999999988877               5788888888754  34


Q ss_pred             EeecCC--------------------------------ccEEEEeccccceee--eccccccCCCeeEEEEcCCCCeEEE
Q psy15995        157 ASGDIS--------------------------------GKVRIWDTVNKEHIL--KNEFHPIGGPIKDIAWSPDNQRMVV  202 (683)
Q Consensus       157 ~~~~~d--------------------------------~~i~iwd~~~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~  202 (683)
                      |++-..                                +.+..|.-...+...  ....-.|...|..+.|+.+|.||++
T Consensus       459 AvA~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlat  538 (733)
T KOG0650|consen  459 AVAVGECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLAT  538 (733)
T ss_pred             EEEecCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEE
Confidence            433322                                233344333211111  0112235678999999999999999


Q ss_pred             EecC-CceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEEC
Q psy15995        203 VGEG-RERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYS  281 (683)
Q Consensus       203 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~  281 (683)
                      +..+ ....+.++.+.......-+....+.|.++.|+|..++ |++++. ..|++||+.....+..+......|..++++
T Consensus       539 V~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~-lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msih  616 (733)
T KOG0650|consen  539 VMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPY-LFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSIH  616 (733)
T ss_pred             eccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCce-EEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeeec
Confidence            8764 3344677777777777777777888999999999996 555554 679999999888888888888899999999


Q ss_pred             CCCCEEEEEcCCCcEEEEeCCCC-eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcc
Q psy15995        282 PSGSHFASAGFDGKVFLYDGASA-DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQV  360 (683)
Q Consensus       282 ~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  360 (683)
                      |.|..|+.++.|+.+..+|+.-. +..+.+..  |...+++++|++.-.++++|+.||++.++.-.-...+..       
T Consensus       617 p~GDnli~gs~d~k~~WfDldlsskPyk~lr~--H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~q-------  687 (733)
T KOG0650|consen  617 PNGDNLILGSYDKKMCWFDLDLSSKPYKTLRL--HEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQ-------  687 (733)
T ss_pred             CCCCeEEEecCCCeeEEEEcccCcchhHHhhh--hhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhc-------
Confidence            99999999999999999998755 45566665  999999999999999999999999999985321111000       


Q ss_pred             eeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeecccc----EEEEEEeCCCCEEEEEeCCCcEEEE
Q psy15995        361 EDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKP----ITALALSPDRGTVFTGSHDGFITRW  429 (683)
Q Consensus       361 ~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~dg~i~~w  429 (683)
                                +                  ..-.+++.+.+|...    |..+.|+|...+|++++.||+|++|
T Consensus       688 ----------n------------------pliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  688 ----------N------------------PLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             ----------C------------------CceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence                      0                  001245667777665    8899999999999999999999998

>KOG0264|consensus

Probab=99.94  E-value=2.4e-25  Score=196.94  Aligned_cols=275  Identities=17%  Similarity=0.264  Sum_probs=202.2

Q ss_pred             CcccceEEEEECCCC-cEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeee-eecceeeeEeeccc-eEEEee
Q psy15995         83 EHSCAVNVAKYSPSG-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLL-SLTSIRNILVLSIG-FYIASG  159 (683)
Q Consensus        83 ~h~~~v~~~~~s~d~-~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~s~~~-~~l~~~  159 (683)
                      .|.+.|+.+.+-|+. ..+|+.+..+.|.|||..+..-......     ....--.+. +...-..++|++.. .+|+++
T Consensus       122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~-----~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~  196 (422)
T KOG0264|consen  122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASG-----ECRPDLRLKGHEKEGYGLSWNRQQEGTLLSG  196 (422)
T ss_pred             cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccc-----cCCCceEEEeecccccccccccccceeEeec
Confidence            599999999999965 5667888899999999876533222110     000000111 11224557888854 489999


Q ss_pred             cCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeec
Q psy15995        160 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKP  239 (683)
Q Consensus       160 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  239 (683)
                      +.|++|++||+......         .++                              -.+...+.+|...|..++|++
T Consensus       197 ~~d~~i~lwdi~~~~~~---------~~~------------------------------~~p~~~~~~h~~~VeDV~~h~  237 (422)
T KOG0264|consen  197 SDDHTICLWDINAESKE---------DKV------------------------------VDPKTIFSGHEDVVEDVAWHP  237 (422)
T ss_pred             cCCCcEEEEeccccccC---------Ccc------------------------------ccceEEeecCCcceehhhccc
Confidence            99999999999764311         000                              012234678999999999999


Q ss_pred             CCCeEEEEeeCCCeEEEEcCC--CCceeeeccccccCeEEEEECCCCC-EEEEEcCCCcEEEEeCCCCe-eEEeccCCcc
Q psy15995        240 SRPFRIITGSEDNTIAVFEGP--PFKFKMTKQEHSRFVQAVRYSPSGS-HFASAGFDGKVFLYDGASAD-LVSELGNPAH  315 (683)
Q Consensus       240 ~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~~  315 (683)
                      ....++.+++.|+.+.|||.+  +.+......+|.++|.|++|+|-+. .||+|+.|++|.+||+++.. .+..+..  |
T Consensus       238 ~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~--H  315 (422)
T KOG0264|consen  238 LHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEG--H  315 (422)
T ss_pred             cchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccC--C
Confidence            888889999999999999999  6667777889999999999999654 78899999999999999864 4555554  9


Q ss_pred             ccCeEEEEEccC-CCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcc
Q psy15995        316 KGGVYAVAWKPD-GTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTP  394 (683)
Q Consensus       316 ~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~  394 (683)
                      ...|..+.|+|. ...|++++.|+.+.+||+..-...+......                              ..+.++
T Consensus       316 ~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~------------------------------dgppEl  365 (422)
T KOG0264|consen  316 EDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAE------------------------------DGPPEL  365 (422)
T ss_pred             CcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhc------------------------------cCCcce
Confidence            999999999995 5678889999999999997543322111000                              011233


Q ss_pred             eeeeeeccccEEEEEEeCCCCE-EEEEeCCCcEEEEcCCC
Q psy15995        395 IRVIKGHNKPITALALSPDRGT-VFTGSHDGFITRWNAKT  433 (683)
Q Consensus       395 ~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~w~~~~  433 (683)
                      +..-.||...|..+.|+|+..+ +++.+.|+.+.||.+..
T Consensus       366 lF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~  405 (422)
T KOG0264|consen  366 LFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE  405 (422)
T ss_pred             eEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence            4556789999999999998866 55888999999999763

>KOG1538|consensus

Probab=99.94  E-value=7.5e-24  Score=196.21  Aligned_cols=461  Identities=14%  Similarity=0.183  Sum_probs=297.9

Q ss_pred             ceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEE
Q psy15995         87 AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVR  166 (683)
Q Consensus        87 ~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~  166 (683)
                      .|..++|-|||..|+.+..+ .+.++|.+.|..+..++.|.              ..|.+++++.||+.+|+|+.|..|.
T Consensus        14 ci~d~afkPDGsqL~lAAg~-rlliyD~ndG~llqtLKgHK--------------DtVycVAys~dGkrFASG~aDK~VI   78 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQPLKGHK--------------DTVYCVAYAKDGKRFASGSADKSVI   78 (1081)
T ss_pred             chheeEECCCCceEEEecCC-EEEEEeCCCccccccccccc--------------ceEEEEEEccCCceeccCCCceeEE
Confidence            79999999999988877544 79999999999999999997              8899999999999999999999999


Q ss_pred             EEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEE
Q psy15995        167 IWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRII  246 (683)
Q Consensus       167 iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  246 (683)
                      +|+..-. .+++   ..|...|.++.|+|-...|++++-+.   .-+|..+.....  -......+.+++|..||++ ++
T Consensus        79 ~W~~klE-G~Lk---YSH~D~IQCMsFNP~~h~LasCsLsd---FglWS~~qK~V~--K~kss~R~~~CsWtnDGqy-la  148 (1081)
T KOG1538|consen   79 IWTSKLE-GILK---YSHNDAIQCMSFNPITHQLASCSLSD---FGLWSPEQKSVS--KHKSSSRIICCSWTNDGQY-LA  148 (1081)
T ss_pred             Eeccccc-ceee---eccCCeeeEeecCchHHHhhhcchhh---ccccChhhhhHH--hhhhheeEEEeeecCCCcE-EE
Confidence            9986542 2222   24678999999999999999887654   334444322211  1223457889999999996 99


Q ss_pred             EeeCCCeEEEEcCCCCceeeec---cccccCeEEEEECCCC-----CEEEEEcCCCcEEEEeCCCCeeEEeccCCccccC
Q psy15995        247 TGSEDNTIAVFEGPPFKFKMTK---QEHSRFVQAVRYSPSG-----SHFASAGFDGKVFLYDGASADLVSELGNPAHKGG  318 (683)
Q Consensus       247 ~~~~d~~i~iw~~~~~~~~~~~---~~~~~~v~~~~~~~~~-----~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~  318 (683)
                      .|-.+|+|.+-+. +++....+   .+...+|.+++|+|..     ..+++.....++.++.+. |+.+..-..  -.-.
T Consensus       149 lG~~nGTIsiRNk-~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~--L~Fd  224 (1081)
T KOG1538|consen  149 LGMFNGTISIRNK-NGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRA--LNFD  224 (1081)
T ss_pred             EeccCceEEeecC-CCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeeccccc--CCCC
Confidence            9999999999974 33333333   3577899999999963     378888888888888864 444442221  3345


Q ss_pred             eEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeee
Q psy15995        319 VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI  398 (683)
Q Consensus       319 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~  398 (683)
                      ..|+.+.++|.+++.|+.|+.+++|..+ |-.+                                            .++
T Consensus       225 P~CisYf~NGEy~LiGGsdk~L~~fTR~-GvrL--------------------------------------------GTv  259 (1081)
T KOG1538|consen  225 PCCISYFTNGEYILLGGSDKQLSLFTRD-GVRL--------------------------------------------GTV  259 (1081)
T ss_pred             chhheeccCCcEEEEccCCCceEEEeec-CeEE--------------------------------------------eec
Confidence            6789999999999999999999998643 2222                                            222


Q ss_pred             eeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceecc------------------CCCCcce------eEEEEe
Q psy15995        399 KGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQG------------------AGHGNQI------NGMKAT  454 (683)
Q Consensus       399 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~------------------~~~~~~v------~~~~~~  454 (683)
                      ......|+.++..|+++.++.|+.||+|..|++..........                  .+....|      ..++..
T Consensus       260 g~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~fSTVH~ly~~RYA~R~sMtDVivQhLi~~qkvrIkC~DLVkKiaiY  339 (1081)
T KOG1538|consen  260 GEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCKDLVKKIAIY  339 (1081)
T ss_pred             cccceeEEEEEEccCCceEEEEEccCeeehhhhHHhHhhhhhHHhhhhhhhhHHHHHHHHhhcceeeeeHHHHHHHHHhh
Confidence            3346789999999999999999999999999876433211110                  0111111      111111


Q ss_pred             CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCC
Q psy15995        455 GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHG  534 (683)
Q Consensus       455 ~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  534 (683)
                      .+.++.- -...|.+|.+.+............                              .+......+-+.+.  ++
T Consensus       340 rnrLAVQ-Lpeki~iYel~se~~~~mhY~v~e------------------------------kI~kkf~cSLlVVc--~~  386 (1081)
T KOG1538|consen  340 RNRLAVQ-LPEKILIYELYSEDLSDMHYRVKE------------------------------KIIKKFECSLLVVC--AN  386 (1081)
T ss_pred             hhhheec-ccceEEEEeccccccccchhHHHH------------------------------HHHhhccceEEEEE--cC
Confidence            2222221 223444555443322111110000                              00011111111111  22


Q ss_pred             EEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEE--CC-CCCEEEEEeCCCeEEEEECCCCccccccceeeecccE
Q psy15995        535 LVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSF--SP-SNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKV  611 (683)
Q Consensus       535 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~--s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v  611 (683)
                      .++. +.+..+.-+|..+-... ...  ..+-|.-+..  -| ...-|+.|-.+|.|.-.=+++.-.+....   ....|
T Consensus       387 HiVl-CqekrLqClDF~Gvk~R-eW~--M~S~iRYikV~GGP~gREgL~vGlknGqV~kiF~dN~~PiLl~~---~~tAv  459 (1081)
T KOG1538|consen  387 HIVL-CQEKRLQCLDFSGVKER-EWQ--MESLIRYIKVIGGPPGREGLLVGLKNGQVLKIFVDNLFPILLLK---QATAV  459 (1081)
T ss_pred             eEEE-Ecccceeeecccchhhh-hhh--HHHHHHhhhhhcCCCCcceeEEEecCCcEEEEEecCCchhheec---cccee
Confidence            2332 34566777777653221 000  0011111111  12 23457788888876543344333222221   45689


Q ss_pred             EEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc--cCCeEE
Q psy15995        612 NCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL--DNDLLV  667 (683)
Q Consensus       612 ~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~~l~  667 (683)
                      .|+..+...+.||+..+.++..++|+.+++.+.+-+      .+.+++|.  .+++|.
T Consensus       460 rClDINA~R~kLAvVDD~~~c~v~DI~t~elL~QEp------g~nSV~wNT~~E~Mlc  511 (1081)
T KOG1538|consen  460 RCLDINASRKKLAVVDDNDTCLVYDIDTKELLFQEP------GANSVAWNTQCEDMLC  511 (1081)
T ss_pred             EEeeccCCcceEEEEccCCeEEEEEccCCceEeecC------CCceEEeeccccceEE
Confidence            999999999999999999999999999998776653      46788887  444444

>KOG1274|consensus

Probab=99.94  E-value=3.7e-24  Score=205.94  Aligned_cols=286  Identities=20%  Similarity=0.298  Sum_probs=224.3

Q ss_pred             ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC-ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC
Q psy15995        226 SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF-KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA  304 (683)
Q Consensus       226 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  304 (683)
                      ..|....+.++|.|+|.+ +++++.||.|++|+.... +....+..+...|.+++..  +.+|++++.+++|.+|...++
T Consensus        10 yaht~G~t~i~~d~~gef-i~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~   86 (933)
T KOG1274|consen   10 YAHTGGLTLICYDPDGEF-ICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPSG   86 (933)
T ss_pred             hhccCceEEEEEcCCCCE-EEEecCCCceEEeecCCcccCCchhhccCceeEEEeec--ccceEEeeccceEEEeeCCCC
Confidence            368888999999999996 999999999999986555 4444444467777776654  458999999999999999888


Q ss_pred             eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEE
Q psy15995        305 DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFIS  384 (683)
Q Consensus       305 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~  384 (683)
                      +.-..+..  ..-++.+++|+.+|++++.|+.|-.|++.+..+....                                 
T Consensus        87 ~~~~iL~R--ftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~---------------------------------  131 (933)
T KOG1274|consen   87 EEDTILAR--FTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQE---------------------------------  131 (933)
T ss_pred             Cccceeee--eeccceEEEEecCCcEEEeecCceeEEEEeccccchh---------------------------------
Confidence            76544432  5568999999999999999999999999998765433                                 


Q ss_pred             EEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcC
Q psy15995        385 YLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGID  464 (683)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d  464 (683)
                                 ..+++|..+|.++.|+|++++||+.+-||.|++||+.++........-.                    
T Consensus       132 -----------~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~--------------------  180 (933)
T KOG1274|consen  132 -----------KVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVD--------------------  180 (933)
T ss_pred             -----------eeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCC--------------------
Confidence                       4568899999999999999999999999999999999887665542100                    


Q ss_pred             CeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCc
Q psy15995        465 DTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSK  544 (683)
Q Consensus       465 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~  544 (683)
                         +..+.                                              .....+..++|+|++..+++.+.|+.
T Consensus       181 ---k~n~~----------------------------------------------~~s~i~~~~aW~Pk~g~la~~~~d~~  211 (933)
T KOG1274|consen  181 ---KDNEF----------------------------------------------ILSRICTRLAWHPKGGTLAVPPVDNT  211 (933)
T ss_pred             ---ccccc----------------------------------------------cccceeeeeeecCCCCeEEeeccCCe
Confidence               00000                                              00123467899999999999999999


Q ss_pred             EEEEEcCCCccCcceeec-CCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeE
Q psy15995        545 VHIYELNNKSLSPKAELD-HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALV  623 (683)
Q Consensus       545 i~i~d~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l  623 (683)
                      |.+|+..+.......... +...+..++|+|+|+|||+++.+|.|.|||.++.+.   .+   ....|++++|-|+..-+
T Consensus       212 Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~---~~---~~~~Vc~~aw~p~~n~i  285 (933)
T KOG1274|consen  212 VKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHER---HE---FKRAVCCEAWKPNANAI  285 (933)
T ss_pred             EEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccchh---cc---ccceeEEEecCCCCCee
Confidence            999999998877555544 344499999999999999999999999999998333   12   34689999999998766


Q ss_pred             EEeecCCcEEEE
Q psy15995        624 ASGSLDTTIIIW  635 (683)
Q Consensus       624 ~~~~~d~~v~iw  635 (683)
                      -.....|...+|
T Consensus       286 t~~~~~g~~~~~  297 (933)
T KOG1274|consen  286 TLITALGTLGVS  297 (933)
T ss_pred             EEEeeccccccC
Confidence            655555544444

>KOG4283|consensus

Probab=99.94  E-value=2.8e-24  Score=178.82  Aligned_cols=301  Identities=19%  Similarity=0.278  Sum_probs=222.4

Q ss_pred             cccccCeEEEEECC-CCCEEEEEcCCCcEEEEeCCCCee-------------EEeccCCccccCeEEEEEcc-CCCEEEE
Q psy15995        269 QEHSRFVQAVRYSP-SGSHFASAGFDGKVFLYDGASADL-------------VSELGNPAHKGGVYAVAWKP-DGTQLLT  333 (683)
Q Consensus       269 ~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~-------------~~~~~~~~~~~~i~~~~~~~-~~~~l~~  333 (683)
                      ..|.+.|+++.+.+ .|+++++|+.||.|.+||+++...             +..-....|+-.|.++.|.| |..++.+
T Consensus        40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts  119 (397)
T KOG4283|consen   40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS  119 (397)
T ss_pred             ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence            45889999999988 578999999999999999976431             11111234888999999999 7778999


Q ss_pred             EECCCcEEEEECCCCceeeEEEecCcceeceEEEEec-CCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeC
Q psy15995        334 ASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ-GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSP  412 (683)
Q Consensus       334 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  412 (683)
                      ++.|.++++||..+.+....|..+...-...++.... .-++++|..+-.|++-|+.. +...+.+.+|.+.|.++.|+|
T Consensus       120 sSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~S-Gs~sH~LsGHr~~vlaV~Wsp  198 (397)
T KOG4283|consen  120 SSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIAS-GSFSHTLSGHRDGVLAVEWSP  198 (397)
T ss_pred             ccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccC-CcceeeeccccCceEEEEecc
Confidence            9999999999999999888887766554444443333 45788888899999999998 556688999999999999999


Q ss_pred             CCCE-EEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCcee
Q psy15995        413 DRGT-VFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGL  491 (683)
Q Consensus       413 ~~~~-l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~  491 (683)
                      ...+ |++|+.||.|++||++...                             |                          
T Consensus       199 ~~e~vLatgsaDg~irlWDiRras-----------------------------g--------------------------  223 (397)
T KOG4283|consen  199 SSEWVLATGSADGAIRLWDIRRAS-----------------------------G--------------------------  223 (397)
T ss_pred             CceeEEEecCCCceEEEEEeeccc-----------------------------c--------------------------
Confidence            7765 5689999999999986421                             1                          


Q ss_pred             eecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCc--ceeecCCcCeeE
Q psy15995        492 DIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSP--KAELDHLGPVTD  569 (683)
Q Consensus       492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~v~~  569 (683)
                                                                          ..++.|..+++..+  +....|.+.+..
T Consensus       224 ----------------------------------------------------cf~~lD~hn~k~~p~~~~n~ah~gkvng  251 (397)
T KOG4283|consen  224 ----------------------------------------------------CFRVLDQHNTKRPPILKTNTAHYGKVNG  251 (397)
T ss_pred             ----------------------------------------------------eeEEeecccCccCccccccccccceeee
Confidence                                                                12222222211111  123458899999


Q ss_pred             EEECCCCCEEEEEeCCCeEEEEECCCCcccccccee-eecccEEEEEe---cCCCCeEEEeecCCcEEEEeCCCCceeeE
Q psy15995        570 CSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWG-FHSAKVNCVAW---SPDSALVASGSLDTTIIIWSLASPAKHII  645 (683)
Q Consensus       570 ~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~h~~~v~~~~~---s~d~~~l~~~~~d~~v~iw~~~~~~~~~~  645 (683)
                      ++|+.|+.++++.+.|..+++|+..+|+-....... .|+.. .++++   +-+...++--=.|+.+.++++-++..+..
T Consensus       252 la~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~-~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~ir~  330 (397)
T KOG4283|consen  252 LAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQT-TSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFVRR  330 (397)
T ss_pred             eeecccchhhhhccCccceEEeecccCccccccccccccccc-ccceEEEeecccceEEEEecCCeEEEEEccCceEEEe
Confidence            999999999999999999999999877643221110 02211 11111   22333444444568899999999999988


Q ss_pred             eecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEee
Q psy15995        646 IKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       646 ~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~  680 (683)
                      +..  |-..|.+.++. +=+.+.++..|+.+..|-.
T Consensus       331 l~~--h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p  364 (397)
T KOG4283|consen  331 LST--HLKRINCAAYRPDFEQCFTGDMNGNIYMWSP  364 (397)
T ss_pred             eec--ccceeeEEeecCchhhhhccccCCccccccc
Confidence            876  67788888877 5578999999999999975

>KOG0321|consensus

Probab=99.93  E-value=2.9e-24  Score=197.92  Aligned_cols=323  Identities=20%  Similarity=0.285  Sum_probs=219.7

Q ss_pred             EEee--cCCCeEEEEeeCCCeEEEEcCCCCcee------eeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee
Q psy15995        235 CDFK--PSRPFRIITGSEDNTIAVFEGPPFKFK------MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL  306 (683)
Q Consensus       235 ~~~~--~~~~~~l~~~~~d~~i~iw~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~  306 (683)
                      ..|+  |+...+|+.+.+||.|.++|.......      .....|.+.|..+.|.|....|++++.|.++++||+++.++
T Consensus        55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l  134 (720)
T KOG0321|consen   55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRL  134 (720)
T ss_pred             ccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeecccee
Confidence            4444  445567999999999999997655443      45567999999999999666899999999999999999988


Q ss_pred             EEeccCCccccCeEEEEEccC-CCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEE
Q psy15995        307 VSELGNPAHKGGVYAVAWKPD-GTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY  385 (683)
Q Consensus       307 ~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~  385 (683)
                      ...-...+|.+.+.+++|.|. ...|++|+.||.+.|||++....-.......               .+.+..++. - 
T Consensus       135 ~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~---------------~~~~~~n~~-p-  197 (720)
T KOG0321|consen  135 VGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDN---------------RIYGRHNTA-P-  197 (720)
T ss_pred             ecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhh---------------hhhccccCC-C-
Confidence            877333459999999999994 5578999999999999998654110000000               000000000 0 


Q ss_pred             EecCCCCcceeeeeeccccEEE---EEEeCCCCEEEEEeC-CCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEE
Q psy15995        386 LDVNNPSTPIRVIKGHNKPITA---LALSPDRGTVFTGSH-DGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTC  461 (683)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~v~~---~~~~~~~~~l~~~~~-dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~  461 (683)
                      -......+.++....+...|.+   +.+..|...||+++. |+.|++||++.................            
T Consensus       198 tpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~------------  265 (720)
T KOG0321|consen  198 TPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYP------------  265 (720)
T ss_pred             CCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCcc------------
Confidence            0000001112233345555555   555667788888877 999999999876554333211000000            


Q ss_pred             EcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcC
Q psy15995        462 GIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGA  541 (683)
Q Consensus       462 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  541 (683)
                                                                            ........+.++.....|.+|.+.+.
T Consensus       266 ------------------------------------------------------t~skrs~G~~nL~lDssGt~L~AsCt  291 (720)
T KOG0321|consen  266 ------------------------------------------------------THSKRSVGQVNLILDSSGTYLFASCT  291 (720)
T ss_pred             ------------------------------------------------------CcccceeeeEEEEecCCCCeEEEEec
Confidence                                                                  00001124567777888899999999


Q ss_pred             CCcEEEEEcCCCccCcceeecCC---cCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecC
Q psy15995        542 DSKVHIYELNNKSLSPKAELDHL---GPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSP  618 (683)
Q Consensus       542 dg~i~i~d~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~  618 (683)
                      |+.|++|++.+....+.....+.   .--..-..+||+.+|++|+.|...++|.+.+.+.-.....+ |...|++++|.|
T Consensus       292 D~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~G-ht~eVt~V~w~p  370 (720)
T KOG0321|consen  292 DNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLG-HTREVTTVRWLP  370 (720)
T ss_pred             CCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhC-cceEEEEEeecc
Confidence            99999999988765544443221   11123356899999999999999999999988776555554 999999999987


Q ss_pred             CC-CeEEEeecCCcEEEEeCCCCc
Q psy15995        619 DS-ALVASGSLDTTIIIWSLASPA  641 (683)
Q Consensus       619 d~-~~l~~~~~d~~v~iw~~~~~~  641 (683)
                      .. .-+|++++|..+++|++..+-
T Consensus       371 S~~t~v~TcSdD~~~kiW~l~~~l  394 (720)
T KOG0321|consen  371 SATTPVATCSDDFRVKIWRLSNGL  394 (720)
T ss_pred             ccCCCceeeccCcceEEEeccCch
Confidence            42 346677999999999996653

>KOG1273|consensus

Probab=99.93  E-value=4e-24  Score=179.67  Aligned_cols=283  Identities=16%  Similarity=0.196  Sum_probs=212.3

Q ss_pred             eEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEE
Q psy15995         88 VNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRI  167 (683)
Q Consensus        88 v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~i  167 (683)
                      -.|+.||+.|.+||+|..||.|.|||+.+-..-..+..|-              .+|.+++||+||+.|++++.|..|.+
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~--------------~pi~sl~WS~dgr~LltsS~D~si~l   91 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHV--------------RPITSLCWSRDGRKLLTSSRDWSIKL   91 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccc--------------cceeEEEecCCCCEeeeecCCceeEE
Confidence            6899999999999999999999999999987766666665              78999999999999999999999999


Q ss_pred             EeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCC----cCeEEEEeecCCCe
Q psy15995        168 WDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQS----KPINSCDFKPSRPF  243 (683)
Q Consensus       168 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~  243 (683)
                      ||+..|.++....+.   .+|....|.|..+..+++.--... -.+.....++...--....    ..-.+..|.+.|++
T Consensus        92 wDl~~gs~l~rirf~---spv~~~q~hp~k~n~~va~~~~~s-p~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~y  167 (405)
T KOG1273|consen   92 WDLLKGSPLKRIRFD---SPVWGAQWHPRKRNKCVATIMEES-PVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKY  167 (405)
T ss_pred             EeccCCCceeEEEcc---CccceeeeccccCCeEEEEEecCC-cEEEEecCCceeeccCCCccccccccccccccCCCCE
Confidence            999999988777776   899999999977665555433222 1233332211111001111    11223368889996


Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeeccccc-cCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC-------ee--EEeccCC
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTKQEHS-RFVQAVRYSPSGSHFASAGFDGKVFLYDGASA-------DL--VSELGNP  313 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-------~~--~~~~~~~  313 (683)
                       +++|...|.+.+++..+.+++..++... ..|..+.++..|+.|+.-+.|..|+.|+++.-       +.  .+.+..-
T Consensus       168 -IitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDv  246 (405)
T KOG1273|consen  168 -IITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDV  246 (405)
T ss_pred             -EEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHH
Confidence             9999999999999999999999887666 78999999999999999999999999987621       11  1122111


Q ss_pred             ccccCeEEEEEccCCCEEEEEEC-CCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCC
Q psy15995        314 AHKGGVYAVAWKPDGTQLLTASG-DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN  390 (683)
Q Consensus       314 ~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~  390 (683)
                      -.+.+=.+++|+.+|.++++++. ...+++|.-..|..++.+..........+.+.|-...++.. ..|.+++|....
T Consensus       247 VNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~~  323 (405)
T KOG1273|consen  247 VNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVVQ  323 (405)
T ss_pred             HhhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEeec
Confidence            12334567899999999887764 46799999999999887765554555555555555555554 788999998654

>KOG0264|consensus

Probab=99.93  E-value=2.2e-24  Score=190.94  Aligned_cols=249  Identities=16%  Similarity=0.253  Sum_probs=204.3

Q ss_pred             eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC----------ceeeeccccccCeEEEEECCCCC-EEEEEcCC
Q psy15995        225 ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF----------KFKMTKQEHSRFVQAVRYSPSGS-HFASAGFD  293 (683)
Q Consensus       225 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d  293 (683)
                      .-.|.+.|+.+.+.|..+.++++.+..+.+.|||....          .....+.+|...-..++|++... .|++++.|
T Consensus       120 ~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d  199 (422)
T KOG0264|consen  120 KINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDD  199 (422)
T ss_pred             eccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCC
Confidence            34689999999999999998999999999999995432          22336788998888899999765 89999999


Q ss_pred             CcEEEEeCCCCee-------EEeccCCccccCeEEEEEcc-CCCEEEEEECCCcEEEEECCCC-ceeeEEEecCcceece
Q psy15995        294 GKVFLYDGASADL-------VSELGNPAHKGGVYAVAWKP-DGTQLLTASGDKTCKLWDIETK-SVVSEFIMGNQVEDQQ  364 (683)
Q Consensus       294 g~i~iw~~~~~~~-------~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~  364 (683)
                      +.|.+||+.....       ...+  .+|...|..++|++ +...|.+++.|+.+.|||++++ .........+.....+
T Consensus       200 ~~i~lwdi~~~~~~~~~~~p~~~~--~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~  277 (422)
T KOG0264|consen  200 HTICLWDINAESKEDKVVDPKTIF--SGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNC  277 (422)
T ss_pred             CcEEEEeccccccCCccccceEEe--ecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeE
Confidence            9999999875433       2233  34999999999999 5678899999999999999963 2233344556677788


Q ss_pred             EEEEe-cCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCCcce----
Q psy15995        365 VSCLW-QGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR-GTVFTGSHDGFITRWNAKTGENDR----  438 (683)
Q Consensus       365 ~~~~~-~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~----  438 (683)
                      +.+.| ++..|++++.|++|.+||+++...++..+.+|...|.++.|+|.. ..|++++.|+.+.+||+..-...+    
T Consensus       278 ~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~ed  357 (422)
T KOG0264|consen  278 VAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPED  357 (422)
T ss_pred             EEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhh
Confidence            88888 566788889999999999999999999999999999999999954 678899999999999987533222    


Q ss_pred             ---------eccCCCCcceeEEEEe---CCeEEEEEcCCeEEEEeCCCC
Q psy15995        439 ---------VQGAGHGNQINGMKAT---GELLYTCGIDDTIKQVDLSSN  475 (683)
Q Consensus       439 ---------~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~~~~~~~  475 (683)
                               ....+|...|..+.++   .-.+++.+.|+.+.+|+....
T Consensus       358 a~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~~  406 (422)
T KOG0264|consen  358 AEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAEN  406 (422)
T ss_pred             hccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecccc
Confidence                     3346899999999998   557889999999999998754

>KOG0269|consensus

Probab=99.93  E-value=2.5e-24  Score=202.95  Aligned_cols=282  Identities=18%  Similarity=0.290  Sum_probs=211.0

Q ss_pred             cCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecC----c--ceeceEEE-EecCCEEEEEecCCcEEEEecC
Q psy15995        317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGN----Q--VEDQQVSC-LWQGDYLLTVSLSGFISYLDVN  389 (683)
Q Consensus       317 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~--~~~~~~~~-~~~~~~l~~~~~~g~i~~~~~~  389 (683)
                      ....++...++-..++.++.. .+++|.+.............    .  .....+.+ ....++|++++.+|.|.+||+.
T Consensus        40 ~~~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdln  118 (839)
T KOG0269|consen   40 AKANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLN  118 (839)
T ss_pred             cccceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecC
Confidence            345667777887778877754 67888776433222111110    0  01111111 2257899999999999999998


Q ss_pred             C--CCcceeeeeeccccEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCe
Q psy15995        390 N--PSTPIRVIKGHNKPITALALSPDR-GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDT  466 (683)
Q Consensus       390 ~--~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~  466 (683)
                      .  ....+..+..|...+.++.|++.. .+|++|++||.|++||++..+....+.. ...                    
T Consensus       119 k~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~-nSE--------------------  177 (839)
T KOG0269|consen  119 KSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRS-NSE--------------------  177 (839)
T ss_pred             ccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccc-cch--------------------
Confidence            7  344556789999999999999854 6788999999999999998776655531 221                    


Q ss_pred             EEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccC-CCEEEEEcCCCcE
Q psy15995        467 IKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHE-HGLVAVGGADSKV  545 (683)
Q Consensus       467 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~dg~i  545 (683)
                                                                              .++.+.|+|. +.+++++.+.|.+
T Consensus       178 --------------------------------------------------------SiRDV~fsp~~~~~F~s~~dsG~l  201 (839)
T KOG0269|consen  178 --------------------------------------------------------SIRDVKFSPGYGNKFASIHDSGYL  201 (839)
T ss_pred             --------------------------------------------------------hhhceeeccCCCceEEEecCCceE
Confidence                                                                    3556666664 5678888999999


Q ss_pred             EEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCC-eEE
Q psy15995        546 HIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSA-LVA  624 (683)
Q Consensus       546 ~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~-~l~  624 (683)
                      ++||++...........|.++|.++.|+|++.+||+|+.|+.|+|||+.+.+........ ...+|.+++|-|+.+ .||
T Consensus       202 qlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~hLA  280 (839)
T KOG0269|consen  202 QLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTIN-TIAPVGRVKWRPARSYHLA  280 (839)
T ss_pred             EEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEe-ecceeeeeeeccCccchhh
Confidence            999998877665666679999999999999999999999999999999977665444333 567899999999865 466


Q ss_pred             Eee--cCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc--cCCeEEEeeCCCcEEEE
Q psy15995        625 SGS--LDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL--DNDLLVSVGQDCNTKIW  678 (683)
Q Consensus       625 ~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~d~~v~vw  678 (683)
                      +++  .|-.|+|||+..+......... |...++.++|.  |...|.+++.|++|..-
T Consensus       281 tcsmv~dtsV~VWDvrRPYIP~~t~~e-H~~~vt~i~W~~~d~~~l~s~sKD~tv~qh  337 (839)
T KOG0269|consen  281 TCSMVVDTSVHVWDVRRPYIPYATFLE-HTDSVTGIAWDSGDRINLWSCSKDGTVLQH  337 (839)
T ss_pred             hhhccccceEEEEeeccccccceeeec-cCccccceeccCCCceeeEeecCccHHHHh
Confidence            654  4778999999998876554433 68999999998  56799999999987543

>KOG1273|consensus

Probab=99.93  E-value=2.6e-23  Score=174.88  Aligned_cols=286  Identities=17%  Similarity=0.292  Sum_probs=209.0

Q ss_pred             eEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEE
Q psy15995        275 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEF  354 (683)
Q Consensus       275 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  354 (683)
                      -.|+.|++.|.+||+|+.||.|.+||+.+...-+.+..  |..+|.+++|++||+.|++++.|..+.+||+..+.+++++
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsa--H~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri  103 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSA--HVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI  103 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhc--cccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE
Confidence            68899999999999999999999999999887777765  9999999999999999999999999999999999887765


Q ss_pred             EecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEE-EeCCCcEEEEcCCC
Q psy15995        355 IMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFT-GSHDGFITRWNAKT  433 (683)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~~w~~~~  433 (683)
                      .                                             ...+|+...|+|.....+. .-.+..-.+-++..
T Consensus       104 r---------------------------------------------f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~  138 (405)
T KOG1273|consen  104 R---------------------------------------------FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSD  138 (405)
T ss_pred             E---------------------------------------------ccCccceeeeccccCCeEEEEEecCCcEEEEecC
Confidence            3                                             3567888888885433222 21222222222222


Q ss_pred             CCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCc
Q psy15995        434 GENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGA  513 (683)
Q Consensus       434 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (683)
                      ... ..++.                   ..|+.                                               
T Consensus       139 ~~h-~~Lp~-------------------d~d~d-----------------------------------------------  151 (405)
T KOG1273|consen  139 PKH-SVLPK-------------------DDDGD-----------------------------------------------  151 (405)
T ss_pred             Cce-eeccC-------------------CCccc-----------------------------------------------
Confidence            110 00000                   00000                                               


Q ss_pred             eeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEEC
Q psy15995        514 KVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRV  593 (683)
Q Consensus       514 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~  593 (683)
                            .+....+..+.+.|+++++|...|.+.+||.++.+.+..........|..+.|+..|++|+.-+.|+.|+.|++
T Consensus       152 ------ln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~  225 (405)
T KOG1273|consen  152 ------LNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEI  225 (405)
T ss_pred             ------cccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEeh
Confidence                  11122344688899999999999999999999998876666555578999999999999999999999999998


Q ss_pred             CC-------Cccccccce--eeecccEEEEEecCCCCeEEEeecC-CcEEEEeCCCCceeeEeecCCCCCCeeEEEEccC
Q psy15995        594 PD-------FELAHNKEW--GFHSAKVNCVAWSPDSALVASGSLD-TTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDN  663 (683)
Q Consensus       594 ~~-------~~~~~~~~~--~~h~~~v~~~~~s~d~~~l~~~~~d-~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~  663 (683)
                      ..       +++.....+  --....-.+++||.||.|++.++.. ..++||.-..|..+..+.+.. ......+.|.+-
T Consensus       226 ~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~k-gE~l~DV~whp~  304 (405)
T KOG1273|consen  226 SDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTK-GEELLDVNWHPV  304 (405)
T ss_pred             hhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCc-hhheeecccccc
Confidence            73       222211110  0023345678999999999887743 479999999999888886532 366788999966


Q ss_pred             CeEEEeeCCCcEEEEeec
Q psy15995        664 DLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       664 ~~l~s~~~d~~v~vw~~~  681 (683)
                      .-++..-..|.+.+|...
T Consensus       305 rp~i~si~sg~v~iw~~~  322 (405)
T KOG1273|consen  305 RPIIASIASGVVYIWAVV  322 (405)
T ss_pred             eeeeeeccCCceEEEEee
Confidence            544444488999999864

>KOG4328|consensus

Probab=99.93  E-value=5.4e-24  Score=188.23  Aligned_cols=304  Identities=16%  Similarity=0.201  Sum_probs=229.4

Q ss_pred             EeCCCCcccccccCcccceEEEEECCCC--cEEEEecCCCCEEEEeCCCccc----ccccccccCCCCcccceeeeeecc
Q psy15995         70 RNIENPAISDIYTEHSCAVNVAKYSPSG--FYIASGDISGKVRIWDTVNKEH----ILKNEFHPIGGPIKDIGTLLSLTS  143 (683)
Q Consensus        70 ~~~~~~~~~~~~~~h~~~v~~~~~s~d~--~~las~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  143 (683)
                      +|+.+-......+-|.++|++++|.|..  +++|+|+..|+|-+||+.+.+.    +..+..|.              .+
T Consensus       171 l~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs--------------~~  236 (498)
T KOG4328|consen  171 LDLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHS--------------GP  236 (498)
T ss_pred             cccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCC--------------cc
Confidence            4555556666677899999999999943  6889999999999999963321    22222222              67


Q ss_pred             eeeeEeeccc-eEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC-c
Q psy15995        144 IRNILVLSIG-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT-S  221 (683)
Q Consensus       144 i~~~~~s~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~-~  221 (683)
                      |.++.|+|.. ..+.+.+.||+|++-|+++...-..+..........++.|+.+...++++..-+  ...+|+..++. .
T Consensus       237 Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G--~f~~iD~R~~~s~  314 (498)
T KOG4328|consen  237 VSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVG--NFNVIDLRTDGSE  314 (498)
T ss_pred             ccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeeccc--ceEEEEeecCCcc
Confidence            9999999954 588899999999999999875433344433456778899999888887776554  46888888755 4


Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceee----eccccccCeEEEEECCCCCEEEEEcCCCcEE
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM----TKQEHSRFVQAVRYSPSGSHFASAGFDGKVF  297 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  297 (683)
                      ...+..|...|..++++|-.++.+++++.|++.+|||++......    ....|...|.+..|||.+-.|++.+.|..|+
T Consensus       315 ~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IR  394 (498)
T KOG4328|consen  315 YENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIR  394 (498)
T ss_pred             chhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceE
Confidence            777889999999999999999999999999999999987654333    3457999999999999988899999999999


Q ss_pred             EEeCC----CCeeEEeccCCccc-c--CeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCc-ceeceEEEEe
Q psy15995        298 LYDGA----SADLVSELGNPAHK-G--GVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQ-VEDQQVSCLW  369 (683)
Q Consensus       298 iw~~~----~~~~~~~~~~~~~~-~--~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~  369 (683)
                      |||..    ..+....+..+... .  ......|.|+..+++++-.-..|-++|-..++.+.++-.... .......++|
T Consensus       395 v~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP  474 (498)
T KOG4328|consen  395 VFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHP  474 (498)
T ss_pred             EeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecc
Confidence            99973    33444444321111 1  234568999999999999989999999999988877655444 3334566777


Q ss_pred             cCC-EEEEEecCCcEEEEecC
Q psy15995        370 QGD-YLLTVSLSGFISYLDVN  389 (683)
Q Consensus       370 ~~~-~l~~~~~~g~i~~~~~~  389 (683)
                      -+. .++.++..|.|++|--.
T Consensus       475 ~~~~~~aG~~s~Gki~vft~k  495 (498)
T KOG4328|consen  475 MRDTLAAGGNSSGKIYVFTNK  495 (498)
T ss_pred             cccceeccCCccceEEEEecC
Confidence            777 44455567888887643

>KOG0269|consensus

Probab=99.93  E-value=3.3e-24  Score=202.14  Aligned_cols=286  Identities=16%  Similarity=0.249  Sum_probs=217.5

Q ss_pred             CCeeEEEEcCCCCeEEEEecCCceEEEEEEccCC----CceeeeecCC---cCeEEEEeecCCCeEEEEeeCCCeEEEEc
Q psy15995        186 GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG----TSVGEISGQS---KPINSCDFKPSRPFRIITGSEDNTIAVFE  258 (683)
Q Consensus       186 ~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~~~d~~i~iw~  258 (683)
                      ....++...++-..+++++..-   ..++..+..    ++........   .....+.|......+|++++..|.|.+||
T Consensus        40 ~~~nAIs~nr~~~qiv~AGrs~---lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWd  116 (839)
T KOG0269|consen   40 AKANAISVNRDINQIVVAGRSL---LKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWD  116 (839)
T ss_pred             cccceEeecCCcceeEEecccc---eeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEe
Confidence            5667788888888888887654   334443321    1111112211   23456677766666799999999999999


Q ss_pred             CCC---CceeeeccccccCeEEEEECCCCC-EEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc-CCCEEEE
Q psy15995        259 GPP---FKFKMTKQEHSRFVQAVRYSPSGS-HFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP-DGTQLLT  333 (683)
Q Consensus       259 ~~~---~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~  333 (683)
                      +..   .+.+..+..|...+.++.|++-.. +|++|+.||.|++||++..+-...+..  ....|..+.|+| .+..|++
T Consensus       117 lnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~--nSESiRDV~fsp~~~~~F~s  194 (839)
T KOG0269|consen  117 LNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRS--NSESIRDVKFSPGYGNKFAS  194 (839)
T ss_pred             cCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccc--cchhhhceeeccCCCceEEE
Confidence            887   667778899999999999999654 889999999999999999988888875  788999999999 5778888


Q ss_pred             EECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCC
Q psy15995        334 ASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPD  413 (683)
Q Consensus       334 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  413 (683)
                      +...|.+++||++..                                           ......+..|.++|.|+.|+|+
T Consensus       195 ~~dsG~lqlWDlRqp-------------------------------------------~r~~~k~~AH~GpV~c~nwhPn  231 (839)
T KOG0269|consen  195 IHDSGYLQLWDLRQP-------------------------------------------DRCEKKLTAHNGPVLCLNWHPN  231 (839)
T ss_pred             ecCCceEEEeeccCc-------------------------------------------hhHHHHhhcccCceEEEeecCC
Confidence            888899999998754                                           3334556789999999999999


Q ss_pred             CCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeee
Q psy15995        414 RGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDI  493 (683)
Q Consensus       414 ~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (683)
                      +.+||+|++|+.|+|||..+.+......                                                    
T Consensus       232 r~~lATGGRDK~vkiWd~t~~~~~~~~t----------------------------------------------------  259 (839)
T KOG0269|consen  232 REWLATGGRDKMVKIWDMTDSRAKPKHT----------------------------------------------------  259 (839)
T ss_pred             CceeeecCCCccEEEEeccCCCccceeE----------------------------------------------------
Confidence            9999999999999999998755432221                                                    


Q ss_pred             cCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCE-EEEEc--CCCcEEEEEcCCCccCcceeecCCcCeeEE
Q psy15995        494 DENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGL-VAVGG--ADSKVHIYELNNKSLSPKAELDHLGPVTDC  570 (683)
Q Consensus       494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~  570 (683)
                                              +....++.++.|-|+..+ ||+++  .|..|+|||+...-+.......|...++.+
T Consensus       260 ------------------------InTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i  315 (839)
T KOG0269|consen  260 ------------------------INTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGI  315 (839)
T ss_pred             ------------------------EeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccce
Confidence                                    112234567777777665 44433  377899999998887777777899999999


Q ss_pred             EECC-CCCEEEEEeCCCeEEEEECCC
Q psy15995        571 SFSP-SNEYLVASDAHRKVVLYRVPD  595 (683)
Q Consensus       571 ~~s~-~~~~l~~~~~d~~i~i~~~~~  595 (683)
                      +|.. |...|.+++.|+.+..-.+++
T Consensus       316 ~W~~~d~~~l~s~sKD~tv~qh~~kn  341 (839)
T KOG0269|consen  316 AWDSGDRINLWSCSKDGTVLQHLFKN  341 (839)
T ss_pred             eccCCCceeeEeecCccHHHHhhhhc
Confidence            9965 667788888888876554443

>KOG1912|consensus

Probab=99.92  E-value=2.2e-21  Score=183.24  Aligned_cols=556  Identities=14%  Similarity=0.130  Sum_probs=337.1

Q ss_pred             eEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCC------------CcEEEEecCCCCEEEEeC
Q psy15995         47 PIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPS------------GFYIASGDISGKVRIWDT  114 (683)
Q Consensus        47 ~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d------------~~~las~~~dg~i~iwd~  114 (683)
                      -.+++|+|.| +|||+++..|.|-|..+.+.+..+.-|...|+.+.|.|-            .-+||+++..|.|.+||.
T Consensus        18 ~~A~Dw~~~G-LiAygshslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~   96 (1062)
T KOG1912|consen   18 RNAADWSPSG-LIAYGSHSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDF   96 (1062)
T ss_pred             ccccccCccc-eEEEecCceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEe
Confidence            5567788876 999999999999999999999999999999999999872            126788999999999999


Q ss_pred             CCcccccccccccCCCCcccceeeeeecceeeeEeecc---c-eEEEeecCCccEEEEeccccceeeeccccccCCCeeE
Q psy15995        115 VNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI---G-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKD  190 (683)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~  190 (683)
                      ..+..+..+..+.              .++..++|-+.   . ..|++-....++.+|+..+|+.++++....  ....+
T Consensus        97 ~~~s~~~~l~~~~--------------~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~--~iLs~  160 (1062)
T KOG1912|consen   97 VLASVINWLSHSN--------------DSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSH--EILSC  160 (1062)
T ss_pred             hhhhhhhhhcCCC--------------cchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCC--cceee
Confidence            9998887777665              55677777663   3 467777778899999999999888877653  56677


Q ss_pred             EEEcCC-CCeEEEEecCCceEEEEEEcc------CCCceeeeecCCc----------------C---------eEEEEee
Q psy15995        191 IAWSPD-NQRMVVVGEGRERFGHVFMSE------TGTSVGEISGQSK----------------P---------INSCDFK  238 (683)
Q Consensus       191 ~~~s~~-~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~----------------~---------v~~~~~~  238 (683)
                      +.+.|- .+.+.+.+..+. ....-+..      .|+....-..|.+                .         ...++|+
T Consensus       161 f~~DPfd~rh~~~l~s~g~-vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~  239 (1062)
T KOG1912|consen  161 FRVDPFDSRHFCVLGSKGF-VLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFS  239 (1062)
T ss_pred             eeeCCCCcceEEEEccCce-EEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcC
Confidence            888884 455555554432 11111111      1222222223322                0         1235678


Q ss_pred             cCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCC--EEEEEcCCCcEEEEeCCCCeeEEe-------
Q psy15995        239 PSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGS--HFASAGFDGKVFLYDGASADLVSE-------  309 (683)
Q Consensus       239 ~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~iw~~~~~~~~~~-------  309 (683)
                      |.-++ ++.......+.++|++-...+....-..+.+.-+.+-|+++  .|++.-.||.+.+|-.+......+       
T Consensus       240 p~~rn-~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~  318 (1062)
T KOG1912|consen  240 PHWRN-ILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLS  318 (1062)
T ss_pred             hhhhc-eEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhc
Confidence            87776 55555667899999988888777776677777778887765  788999999999996544211111       


Q ss_pred             ---------ccCCccccCeEEEEEccC-CCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEe-----cCCEE
Q psy15995        310 ---------LGNPAHKGGVYAVAWKPD-GTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW-----QGDYL  374 (683)
Q Consensus       310 ---------~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l  374 (683)
                               +.. ..+..+......|. ...++.--.+|.+.+|.+.+++.-.............+.+..     ....+
T Consensus       319 ~dl~~Q~~~vr~-m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l  397 (1062)
T KOG1912|consen  319 MDLGEQVHVVRP-MEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSL  397 (1062)
T ss_pred             cccccceEEEee-chhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccc
Confidence                     110 01122222233343 333444445778899999877654332221111111111111     01112


Q ss_pred             EEEecCCcEEEEecCCCCcceeeeeeccccEEEEEE-----------eCCC-------CEEEEEeCCCcEEEEcCCCCCc
Q psy15995        375 LTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALAL-----------SPDR-------GTVFTGSHDGFITRWNAKTGEN  436 (683)
Q Consensus       375 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-----------~~~~-------~~l~~~~~dg~i~~w~~~~~~~  436 (683)
                      ..-+.+|                  +|....++...           .|.+       ..++.|...|+|.++|+.++..
T Consensus       398 ~~LS~dg------------------~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v  459 (1062)
T KOG1912|consen  398 ISLSDDG------------------SHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAV  459 (1062)
T ss_pred             cchhhcC------------------CCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhh
Confidence            2222222                  12222222211           1111       3678999999999999999887


Q ss_pred             ceeccCCCCcceeEEEEeCC-eEEEEEc----------CCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEece
Q psy15995        437 DRVQGAGHGNQINGMKATGE-LLYTCGI----------DDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQ  505 (683)
Q Consensus       437 ~~~~~~~~~~~v~~~~~~~~-~l~~~~~----------d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (683)
                      ...+ ..|...|.++.|.|+ .+++.+.          -+.+.+-|++++.-...                         
T Consensus       460 ~~~f-svht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~f-------------------------  513 (1062)
T KOG1912|consen  460 AASF-SVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRF-------------------------  513 (1062)
T ss_pred             hhhh-cccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEccccccccc-------------------------
Confidence            7666 679999999999954 4554432          23455555555421110                         


Q ss_pred             EEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcC-eeEEEEC-----------
Q psy15995        506 ISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGP-VTDCSFS-----------  573 (683)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-v~~~~~s-----------  573 (683)
                              +...-+...+|..+..+..++||+....+.-+.+||+++.........  .-+ ++.+.|+           
T Consensus       514 --------R~l~~~despI~~irvS~~~~yLai~Fr~~plEiwd~kt~~~lr~mS~--a~P~it~leWsl~~~~si~qk~  583 (1062)
T KOG1912|consen  514 --------RGLQKPDESPIRAIRVSSSGRYLAILFRREPLEIWDLKTLRMLRLMSL--ALPLITVLEWSLPKHPSIKQKE  583 (1062)
T ss_pred             --------ccCCCCCcCcceeeeecccCceEEEEecccchHHHhhccchHHHHHhh--cCCcEEEEeecccCCCCccccc
Confidence                    111223456889999999999999999999999999976543211110  000 1111111           


Q ss_pred             ----------------------------------------------------CCCCEEEEEeCCCeEEEEECCCCccccc
Q psy15995        574 ----------------------------------------------------PSNEYLVASDAHRKVVLYRVPDFELAHN  601 (683)
Q Consensus       574 ----------------------------------------------------~~~~~l~~~~~d~~i~i~~~~~~~~~~~  601 (683)
                                                                          -.+..|+.|+.+|.+.+||+...+-...
T Consensus       584 ls~q~sms~n~vv~ds~es~~~~~~~~a~~~sdgsq~~~a~esfafal~~mAwk~d~lv~GD~~GNl~~WDlg~R~SRg~  663 (1062)
T KOG1912|consen  584 LSKQSSMSENLVVLDSVESRIYHITLSALVVSDGSQVNTAWESFAFALCAMAWKDDILVVGDVEGNLVVWDLGRRQSRGV  663 (1062)
T ss_pred             chhhhhhhhceeeeccccchheehhhhhhhhccccchhhHHHHHHHHHHhhhccCCeeEeecccCceeEEecccccccCc
Confidence                                                                1245799999999999999865433221


Q ss_pred             cceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEccCCeEEEeeCCCcEEEE
Q psy15995        602 KEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIW  678 (683)
Q Consensus       602 ~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~v~vw  678 (683)
                      .....|........+-|....++.--.|+ +-+||.+....+..+.+....-.+..+.|.....++... |.++++-
T Consensus       664 ~d~p~~ra~~l~~~~ipG~~~~lvl~~d~-~~lwdtk~~~lV~siag~dssfrlldvdlc~~~~~~l~~-d~~~Rf~  738 (1062)
T KOG1912|consen  664 RDSPDPRAHSLTFPQIPGDHTTLVLELDW-LPLWDTKADTLVLSIAGMDSSFRLLDVDLCEKSPLVLPN-DNKERFR  738 (1062)
T ss_pred             cCCCCchhhheecccCCCCceEEEEecCc-ceecccccceeeeeeccCCcceEEEEEEecccCceecCC-CCceeEE
Confidence            11111333333334445322333344454 778887777666666433333445555555333333322 2255543

>KOG1524|consensus

Probab=99.92  E-value=1e-21  Score=177.41  Aligned_cols=493  Identities=13%  Similarity=0.140  Sum_probs=300.9

Q ss_pred             CeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccce-EEEEECC-------CCcEEEEecCCCCEEEEeCCCc
Q psy15995         46 QPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAV-NVAKYSP-------SGFYIASGDISGKVRIWDTVNK  117 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v-~~~~~s~-------d~~~las~~~dg~i~iwd~~~~  117 (683)
                      .+.++.|+.....+..++|..+.+|+-.+......+.-...-| +.+-.-+       ....++.++.||.+.|-+ ..+
T Consensus        16 ~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~-k~~   94 (737)
T KOG1524|consen   16 KVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILN-KSA   94 (737)
T ss_pred             eEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEec-ccc
Confidence            3468889999999999999888888765543332222111111 1111111       224678888999999887 444


Q ss_pred             ccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCC
Q psy15995        118 EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDN  197 (683)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~  197 (683)
                      +.-..+..|.              ..+.+-.|+|||.-|++.++||.|++|.-...   +...+.....+|.|++|.|+.
T Consensus        95 rVE~sv~AH~--------------~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGM---LRStl~Q~~~~v~c~~W~p~S  157 (737)
T KOG1524|consen   95 RVERSISAHA--------------AAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM---LRSTVVQNEESIRCARWAPNS  157 (737)
T ss_pred             hhhhhhhhhh--------------hhhhhcccCCCCceeeeecCCceEEEEeccch---HHHHHhhcCceeEEEEECCCC
Confidence            4444555554              77889999999999999999999999986543   334444556899999999999


Q ss_pred             CeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEE
Q psy15995        198 QRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQA  277 (683)
Q Consensus       198 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~  277 (683)
                      +.++.+.++.   +.+-.......+-..+.|.+-|.++.|++..+. +++|++|-..++||. .|..+..-..|..+|++
T Consensus       158 ~~vl~c~g~h---~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~l-I~sgGED~kfKvWD~-~G~~Lf~S~~~ey~ITS  232 (737)
T KOG1524|consen  158 NSIVFCQGGH---ISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNI-IASGGEDFRFKIWDA-QGANLFTSAAEEYAITS  232 (737)
T ss_pred             CceEEecCCe---EEEeecccccceeEEeccCcEEEEeecCccccc-eeecCCceeEEeecc-cCcccccCChhccceee
Confidence            8888877664   566677777777888999999999999999984 999999999999995 56677777889999999


Q ss_pred             EEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEec
Q psy15995        278 VRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMG  357 (683)
Q Consensus       278 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  357 (683)
                      ++|+|+ +.++.++. .+.+            +. ....+.|..++|++||..++.|+..|.+.+=..-..+...     
T Consensus       233 va~npd-~~~~v~S~-nt~R------------~~-~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~A~~ieq~l~~-----  292 (737)
T KOG1524|consen  233 VAFNPE-KDYLLWSY-NTAR------------FS-SPRVGSIFNLSWSADGTQATCGTSTGQLIVAYAIEQQLVS-----  292 (737)
T ss_pred             eeeccc-cceeeeee-eeee------------ec-CCCccceEEEEEcCCCceeeccccCceEEEeeeehhhhhh-----
Confidence            999999 66666664 3444            22 1266789999999999999999998877654332222111     


Q ss_pred             CcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcc
Q psy15995        358 NQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEND  437 (683)
Q Consensus       358 ~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~  437 (683)
                                   ++.-++......|.+-|+.++-.   ........+......  -.+|+++. ...|++|.-..-...
T Consensus       293 -------------~n~~~t~~~r~~I~vrdV~~~v~---d~LE~p~rv~k~sL~--Y~hLvvaT-s~qvyiys~knwntp  353 (737)
T KOG1524|consen  293 -------------GNLKATSKSRKSITVRDVATGVQ---DILEFPQRVVKFSLG--YGHLVVAT-SLQVYIYSEKNWNTP  353 (737)
T ss_pred             -------------ccceeEeeccceEEeehhhhhHH---HHhhCccceeeeeec--eeEEEEEe-ccEEEEEecCCccCc
Confidence                         01111112222233333322111   111122233333322  12333322 123444432211100


Q ss_pred             eeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeee
Q psy15995        438 RVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSS  517 (683)
Q Consensus       438 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (683)
                      ..                                                                     ++.....  
T Consensus       354 ii---------------------------------------------------------------------idgre~t--  362 (737)
T KOG1524|consen  354 II---------------------------------------------------------------------IDGREDT--  362 (737)
T ss_pred             EE---------------------------------------------------------------------Eeccccc--
Confidence            00                                                                     0000000  


Q ss_pred             ecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeec-CCcCeeEEEECCCCCEEEEE--eCCCeEEEEEC-
Q psy15995        518 LPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELD-HLGPVTDCSFSPSNEYLVAS--DAHRKVVLYRV-  593 (683)
Q Consensus       518 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~--~~d~~i~i~~~-  593 (683)
                               ..+-..++......+..+|.+|..+..........+ .....+.=..|-....|+.-  .+...+.+||. 
T Consensus       363 ---------r~lieq~ek~fli~dgsSi~lytyegR~~~np~~Pg~~~dlL~~rtlsLandtLaird~ad~kvlhlFd~i  433 (737)
T KOG1524|consen  363 ---------RNLIEQGEKYFLILDGSSIWLYTYEGRLHLNPRYPGSQIDLLTWRTLSLANDTLAIRDNADPKVLHLFDLI  433 (737)
T ss_pred             ---------hhHhhhhhhheEEecCcEEEEEEecCceecCCCCCCcccccccceeeecccceEEeecCCCCeeEEeccCC
Confidence                     000011111111223345677766554332111111 11111111122222344443  23456789998 


Q ss_pred             CCCccccccceeeecccEEEEEec----CCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEccCCeEEEe
Q psy15995        594 PDFELAHNKEWGFHSAKVNCVAWS----PDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSV  669 (683)
Q Consensus       594 ~~~~~~~~~~~~~h~~~v~~~~~s----~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~  669 (683)
                      .+++.......-.|...|..++..    ++.+.+|--+..+.++|=.+.+-.....+..  -..-|..++|.|..-++.+
T Consensus       434 stgk~qgDgk~L~hk~~IveIAldqkG~tnDrkVAFiDknrdl~ItsvKrfgkee~I~K--iGTmVhtLawndttNiLcg  511 (737)
T KOG1524|consen  434 STGKRQGDGKSLRHKQQIVEIALDQKGLTNDRKVAFIDKNRDLFITSVKRFGKEEEIYK--IGTMVHTLAWNDTTNILCG  511 (737)
T ss_pred             CCCcccCCccccchhhhHHHhHhhccCCCccceEEEEecCCcEEEEeehhcCchhhhhh--hhhhhhhhhhccccceeee
Confidence            777776554422377788877774    4567888888888888888765433322211  2467889999999889999


Q ss_pred             eCCCcEEEEeecc
Q psy15995        670 GQDCNTKIWEIAP  682 (683)
Q Consensus       670 ~~d~~v~vw~~~~  682 (683)
                      -.|+++.||-.++
T Consensus       512 lqDt~fsVWy~pn  524 (737)
T KOG1524|consen  512 LQDTCFSVWYYPN  524 (737)
T ss_pred             eccceEEEEEcCC
Confidence            9999999998765

>KOG0650|consensus

Probab=99.92  E-value=4.5e-23  Score=188.65  Aligned_cols=316  Identities=16%  Similarity=0.177  Sum_probs=234.4

Q ss_pred             eeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCC--EEEEEECCCcEE
Q psy15995        264 FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGT--QLLTASGDKTCK  341 (683)
Q Consensus       264 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~dg~i~  341 (683)
                      +...+.+|.+.|+++...|.|.+|++|+.||+|++|.+.++.++..+.   ..+.|.+++|+|.+.  .|+++- ...+.
T Consensus       392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~---~d~~I~~vaw~P~~~~~vLAvA~-~~~~~  467 (733)
T KOG0650|consen  392 CALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ---FDSEIRSVAWNPLSDLCVLAVAV-GECVL  467 (733)
T ss_pred             eeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe---ecceeEEEEecCCCCceeEEEEe-cCceE
Confidence            344567999999999999999999999999999999999999999987   567899999999665  344444 44477


Q ss_pred             EEECCCCceeeEEEecCcceeceEEEEecCCEEEEE----ecCCcEEEEecCCC---CcceeeeeeccccEEEEEEeCCC
Q psy15995        342 LWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTV----SLSGFISYLDVNNP---STPIRVIKGHNKPITALALSPDR  414 (683)
Q Consensus       342 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~g~i~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~  414 (683)
                      +.+..-|..+....              ....++.+    ..++.+..|.-...   ..-+...-.|...|..+.|+..|
T Consensus       468 ivnp~~G~~~e~~~--------------t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkG  533 (733)
T KOG0650|consen  468 IVNPIFGDRLEVGP--------------TKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKG  533 (733)
T ss_pred             EeCccccchhhhcc--------------hhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCC
Confidence            77766553222110              01111111    22446667765522   22244556689999999999999


Q ss_pred             CEEEEEeCC---CcEEEEcCCCCCcceeccCCCCcceeEEEEe--CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCc
Q psy15995        415 GTVFTGSHD---GFITRWNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPR  489 (683)
Q Consensus       415 ~~l~~~~~d---g~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~  489 (683)
                      .+|++...+   ..|.|.++.....+..+ ....+.+.++.|.  ..+|+.+ ....|++||+.........        
T Consensus       534 DYlatV~~~~~~~~VliHQLSK~~sQ~PF-~kskG~vq~v~FHPs~p~lfVa-Tq~~vRiYdL~kqelvKkL--------  603 (733)
T KOG0650|consen  534 DYLATVMPDSGNKSVLIHQLSKRKSQSPF-RKSKGLVQRVKFHPSKPYLFVA-TQRSVRIYDLSKQELVKKL--------  603 (733)
T ss_pred             ceEEEeccCCCcceEEEEecccccccCch-hhcCCceeEEEecCCCceEEEE-eccceEEEehhHHHHHHHH--------
Confidence            999987654   46889998876655333 3456778888888  3444444 4578999998875432211        


Q ss_pred             eeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeE
Q psy15995        490 GLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTD  569 (683)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~  569 (683)
                                                  ++....+..++++|.|.-|++|+.|+.+..||++-.....+...-|...+++
T Consensus       604 ----------------------------~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~  655 (733)
T KOG0650|consen  604 ----------------------------LTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRS  655 (733)
T ss_pred             ----------------------------hcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhh
Confidence                                        1223457899999999999999999999999998776555555569999999


Q ss_pred             EEECCCCCEEEEEeCCCeEEEEECC-------CCccccccceeeeccc----EEEEEecCCCCeEEEeecCCcEEEE
Q psy15995        570 CSFSPSNEYLVASDAHRKVVLYRVP-------DFELAHNKEWGFHSAK----VNCVAWSPDSALVASGSLDTTIIIW  635 (683)
Q Consensus       570 ~~~s~~~~~l~~~~~d~~i~i~~~~-------~~~~~~~~~~~~h~~~----v~~~~~s~d~~~l~~~~~d~~v~iw  635 (683)
                      ++|++.-.++++|+.||++.||.-.       +..++....+.+|...    |....|+|...+|++++.||+|++|
T Consensus       656 Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  656 VAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             hhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence            9999999999999999999998532       2333444455557655    8999999999999999999999998

>KOG0321|consensus

Probab=99.92  E-value=5.9e-23  Score=189.38  Aligned_cols=282  Identities=20%  Similarity=0.220  Sum_probs=215.5

Q ss_pred             ceEEEeecCCccEEEEecccccee----eeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceee--ee
Q psy15995        153 GFYIASGDISGKVRIWDTVNKEHI----LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGE--IS  226 (683)
Q Consensus       153 ~~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~  226 (683)
                      ...||.+.+||.|.++|.......    .......|.+.|..+.|.|....|+.+.++..  +++|+.+.++....  +.
T Consensus        64 eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT--~r~Wdvk~s~l~G~~~~~  141 (720)
T KOG0321|consen   64 EHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDST--IRPWDVKTSRLVGGRLNL  141 (720)
T ss_pred             cceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCce--eeeeeeccceeecceeec
Confidence            458999999999999998764322    22456678899999999995556666655543  78999999888877  89


Q ss_pred             cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc---------------------------eeeeccccccCeEE--
Q psy15995        227 GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK---------------------------FKMTKQEHSRFVQA--  277 (683)
Q Consensus       227 ~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---------------------------~~~~~~~~~~~v~~--  277 (683)
                      +|...|.+++|.|.++..+++|+.||.|.|||++...                           .......+...|.+  
T Consensus       142 GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssv  221 (720)
T KOG0321|consen  142 GHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSV  221 (720)
T ss_pred             ccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeee
Confidence            9999999999999999999999999999999965322                           01111234455555  


Q ss_pred             -EEECCCCCEEEEEcC-CCcEEEEeCCCCeeEEecc------CCcc---ccCeEEEEEccCCCEEEEEECCCcEEEEECC
Q psy15995        278 -VRYSPSGSHFASAGF-DGKVFLYDGASADLVSELG------NPAH---KGGVYAVAWKPDGTQLLTASGDKTCKLWDIE  346 (683)
Q Consensus       278 -~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~------~~~~---~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~  346 (683)
                       +.+..|...||+++. |+.|++||++.........      .+.|   .-.+.++.....|.+|++.+.|+.|..||+.
T Consensus       222 Tvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~  301 (720)
T KOG0321|consen  222 TVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMR  301 (720)
T ss_pred             EEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEecc
Confidence             666778888999887 9999999998765443332      1223   3467778888888999888889999999998


Q ss_pred             CCcee--eEEEecC-cceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC-CEEEEEeC
Q psy15995        347 TKSVV--SEFIMGN-QVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR-GTVFTGSH  422 (683)
Q Consensus       347 ~~~~~--~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~  422 (683)
                      ....-  ..+.... ......-..+|++.++++|+.+...++|.+.....+...+.+|...|++++|.|.. .-+++++.
T Consensus       302 s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSd  381 (720)
T KOG0321|consen  302 SLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSD  381 (720)
T ss_pred             ccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeecc
Confidence            65432  2221111 11122344567999999999999999999999999999999999999999998843 45777799


Q ss_pred             CCcEEEEcCCCCCc
Q psy15995        423 DGFITRWNAKTGEN  436 (683)
Q Consensus       423 dg~i~~w~~~~~~~  436 (683)
                      |..+++|++..+-.
T Consensus       382 D~~~kiW~l~~~l~  395 (720)
T KOG0321|consen  382 DFRVKIWRLSNGLE  395 (720)
T ss_pred             CcceEEEeccCchh
Confidence            99999999965543

>KOG4378|consensus

Probab=99.92  E-value=9.3e-23  Score=182.23  Aligned_cols=296  Identities=18%  Similarity=0.264  Sum_probs=225.7

Q ss_pred             CeEEEecCCeEEEEeCCCCcccccccCcc--cceEEEEECCCCc-EEEEecCCCCEEEEeCCCcccccccccccCCCCcc
Q psy15995         57 KNFLYTNGNSVIIRNIENPAISDIYTEHS--CAVNVAKYSPSGF-YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIK  133 (683)
Q Consensus        57 ~~l~~~~~~~i~v~~~~~~~~~~~~~~h~--~~v~~~~~s~d~~-~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  133 (683)
                      ++.++..+..+.+||....+....+..|+  ..+.++.|+.... .+|+.+.|..+++|.-...  .-+...-       
T Consensus         4 Nl~~aS~gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~--~~~Vp~~-------   74 (673)
T KOG4378|consen    4 NLHVASTGDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGK--TPEVPRV-------   74 (673)
T ss_pred             ceeeeccCCceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCC--CCcccee-------
Confidence            35666677899999998765544444342  3488999988764 2344557778999974433  1111100       


Q ss_pred             cceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEE
Q psy15995        134 DIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHV  213 (683)
Q Consensus       134 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~  213 (683)
                        .. .....-.|++......|+++|+..+.|+|||+....  ....+..|...|+++.++....++|+++.+++  +.+
T Consensus        75 --~k-~~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl--~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGd--iii  147 (673)
T KOG4378|consen   75 --RK-LTGDNAFCVACASQSLYEISGGQSGCVKIWDLRAKL--IHRFLKDHQSTVTYVDYNNTDEYIASVSDGGD--III  147 (673)
T ss_pred             --ec-cccchHHHHhhhhcceeeeccCcCceeeehhhHHHH--HhhhccCCcceeEEEEecCCcceeEEeccCCc--EEE
Confidence              00 001233455555556899999999999999998543  34556778899999999999999999998877  567


Q ss_pred             EEccCCCceeeeecC-CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeec-cccccCeEEEEECCCCC-EEEEE
Q psy15995        214 FMSETGTSVGEISGQ-SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK-QEHSRFVQAVRYSPSGS-HFASA  290 (683)
Q Consensus       214 ~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~-~l~~~  290 (683)
                      ....++....++... ...|.-+.|+|..+++|.+++.+|.|.+||......+... ..|..+...++|+|..+ +|++.
T Consensus       148 h~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsV  227 (673)
T KOG4378|consen  148 HGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSV  227 (673)
T ss_pred             EecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEe
Confidence            777787777777665 4456699999999999999999999999999887776654 57999999999999765 77889


Q ss_pred             cCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEec
Q psy15995        291 GFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ  370 (683)
Q Consensus       291 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (683)
                      +.|..|.+||.........+.   -..+...++|.++|.+|++|...|.|..||++..                      
T Consensus       228 G~Dkki~~yD~~s~~s~~~l~---y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~----------------------  282 (673)
T KOG4378|consen  228 GYDKKINIYDIRSQASTDRLT---YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRST----------------------  282 (673)
T ss_pred             cccceEEEeecccccccceee---ecCCcceeeecCCceEEEeecCCceEEEEecccC----------------------
Confidence            999999999999877776665   5668999999999999999999999999999864                      


Q ss_pred             CCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC
Q psy15995        371 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR  414 (683)
Q Consensus       371 ~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  414 (683)
                                           ..|+..+..|...|++++|-|..
T Consensus       283 ---------------------k~Pv~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  283 ---------------------KAPVAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             ---------------------CCCceEeeecccceeEEEeeecc
Confidence                                 33455667788888888887754

>KOG2445|consensus

Probab=99.92  E-value=1.9e-22  Score=169.24  Aligned_cols=279  Identities=17%  Similarity=0.269  Sum_probs=189.3

Q ss_pred             ccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeec--cceEEEe
Q psy15995         81 YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS--IGFYIAS  158 (683)
Q Consensus        81 ~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~  158 (683)
                      -.+|.+-|.|+.|.+-|+++|+|+.|++|+|||......-....          ..+..+...|..+.|.+  -|+.+|+
T Consensus         9 ~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~T----------s~Wrah~~Si~rV~WAhPEfGqvvA~   78 (361)
T KOG2445|consen    9 DSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCT----------SSWRAHDGSIWRVVWAHPEFGQVVAT   78 (361)
T ss_pred             ccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEe----------eeEEecCCcEEEEEecCccccceEEE
Confidence            45899999999999999999999999999999975543222111          11223336788888876  5899999


Q ss_pred             ecCCccEEEEeccccceeeeccccccC-CCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEe
Q psy15995        159 GDISGKVRIWDTVNKEHILKNEFHPIG-GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDF  237 (683)
Q Consensus       159 ~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  237 (683)
                      ++.|+++.||.=....      ...+. ..+                                ....+......|+.+.|
T Consensus        79 cS~Drtv~iWEE~~~~------~~~~~~~Wv--------------------------------~~ttl~DsrssV~DV~F  120 (361)
T KOG2445|consen   79 CSYDRTVSIWEEQEKS------EEAHGRRWV--------------------------------RRTTLVDSRSSVTDVKF  120 (361)
T ss_pred             EecCCceeeeeecccc------cccccceeE--------------------------------EEEEeecCCcceeEEEe
Confidence            9999999999753111      11110 011                                11223344556778888


Q ss_pred             ecCC-CeEEEEeeCCCeEEEEcCCCC------ceeeecc-------ccccCeEEEEECCC---CCEEEEEcCC-----Cc
Q psy15995        238 KPSR-PFRIITGSEDNTIAVFEGPPF------KFKMTKQ-------EHSRFVQAVRYSPS---GSHFASAGFD-----GK  295 (683)
Q Consensus       238 ~~~~-~~~l~~~~~d~~i~iw~~~~~------~~~~~~~-------~~~~~v~~~~~~~~---~~~l~~~~~d-----g~  295 (683)
                      .|.. ...+++++.||.++||+...-      .+...++       .+.....|+.|+|.   .++||+|+.+     +.
T Consensus       121 aP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~  200 (361)
T KOG2445|consen  121 APKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNK  200 (361)
T ss_pred             cchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccc
Confidence            7753 236899999999999985432      2222333       46677889999984   4578888765     47


Q ss_pred             EEEEeCCCC--eeEEeccCCccccCeEEEEEccC----CCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEe
Q psy15995        296 VFLYDGASA--DLVSELGNPAHKGGVYAVAWKPD----GTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW  369 (683)
Q Consensus       296 i~iw~~~~~--~~~~~~~~~~~~~~i~~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  369 (683)
                      ++||....+  +....-..+.|..+|++++|.|+    -..|++++.|| |+||++....... ...+.           
T Consensus       201 ~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i-~~ee~-----------  267 (361)
T KOG2445|consen  201 VKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAI-EEEEV-----------  267 (361)
T ss_pred             eEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchh-hhhcc-----------
Confidence            888865443  44444444569999999999995    35789999999 9999987532111 00000           


Q ss_pred             cCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        370 QGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       370 ~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                           .....-+.   +    +-+.+..+..|+++|..+.|+-.|..|++.+.||.|++|...
T Consensus       268 -----~~~~~~~~---l----~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan  318 (361)
T KOG2445|consen  268 -----LAPDLMTD---L----PVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN  318 (361)
T ss_pred             -----cCCCCccc---c----ceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence                 00000000   0    012345577899999999999999999999999999999754

>KOG4378|consensus

Probab=99.91  E-value=1.2e-22  Score=181.60  Aligned_cols=297  Identities=19%  Similarity=0.264  Sum_probs=223.0

Q ss_pred             EcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEE--ECCCcEEEEECCCCc-eeeEEEecCcceeceEE
Q psy15995        290 AGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA--SGDKTCKLWDIETKS-VVSEFIMGNQVEDQQVS  366 (683)
Q Consensus       290 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~--~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~  366 (683)
                      ++....+++||....+....+........+.++.|..... |+++  +.|..+++|.-.... .+............++.
T Consensus         8 aS~gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~-lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~   86 (673)
T KOG4378|consen    8 ASTGDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNF-LVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVA   86 (673)
T ss_pred             eccCCceEEeecccccCccccccCCCCCcceeeeccccce-EEEeecCCceeEEEecccCCCCccceeeccccchHHHHh
Confidence            3334579999988766555443322333489999987654 4444  457778888654331 12222222333455666


Q ss_pred             EEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCc
Q psy15995        367 CLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGN  446 (683)
Q Consensus       367 ~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~  446 (683)
                      +.....++++|+..+.+++||++. ....+.+++|...|+++.++-...+||+++..|.|.+..+.++.....+..+...
T Consensus        87 ~~s~S~y~~sgG~~~~Vkiwdl~~-kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgq  165 (673)
T KOG4378|consen   87 CASQSLYEISGGQSGCVKIWDLRA-KLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQ  165 (673)
T ss_pred             hhhcceeeeccCcCceeeehhhHH-HHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCC
Confidence            666778999999999999999994 6667888999999999999999999999999999999999887765544321111


Q ss_pred             ceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcE
Q psy15995        447 QINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSS  526 (683)
Q Consensus       447 ~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  526 (683)
                                                                                                  .+..
T Consensus       166 ----------------------------------------------------------------------------svRl  169 (673)
T KOG4378|consen  166 ----------------------------------------------------------------------------SVRL  169 (673)
T ss_pred             ----------------------------------------------------------------------------eEEE
Confidence                                                                                        1233


Q ss_pred             EEEccCCC-EEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECC-CCCEEEEEeCCCeEEEEECCCCccccccce
Q psy15995        527 ISLDHEHG-LVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSP-SNEYLVASDAHRKVVLYRVPDFELAHNKEW  604 (683)
Q Consensus       527 ~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~  604 (683)
                      +.++|..+ +|.+++.+|.|.+||.....+.......|..+...++|+| +..+|++.+.|..|.+||....+...... 
T Consensus       170 l~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-  248 (673)
T KOG4378|consen  170 LRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT-  248 (673)
T ss_pred             eecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceee-
Confidence            45555544 5667889999999999999888777777999999999999 56677889999999999998776654444 


Q ss_pred             eeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEccCCeEEE
Q psy15995        605 GFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVS  668 (683)
Q Consensus       605 ~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s  668 (683)
                        ...+..+++|+++|.+|+.|...|.|..||++..+.......+ |...|++++|-+...+++
T Consensus       249 --y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sa-h~~sVt~vafq~s~tvlt  309 (673)
T KOG4378|consen  249 --YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSA-HDASVTRVAFQPSPTVLT  309 (673)
T ss_pred             --ecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeee-cccceeEEEeeecceeee
Confidence              5678899999999999999999999999999987766555544 477899999986554443

>KOG2445|consensus

Probab=99.91  E-value=3.7e-22  Score=167.45  Aligned_cols=254  Identities=17%  Similarity=0.265  Sum_probs=185.9

Q ss_pred             eeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCccee---ccCCCCcceeEEEEe----CCeEEEEEcCCeEEEEe
Q psy15995        399 KGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRV---QGAGHGNQINGMKAT----GELLYTCGIDDTIKQVD  471 (683)
Q Consensus       399 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~---~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~~~~  471 (683)
                      .+|.+-|.++.|.+.|+.+++++.|++|+|||.+.....-.   .-..|.+.|..+.+.    |+.+++++.|+++.+|.
T Consensus        10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE   89 (361)
T KOG2445|consen   10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE   89 (361)
T ss_pred             cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence            56889999999999999999999999999999754433211   225689999999987    99999999999999998


Q ss_pred             CCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccC--CCEEEEEcCCCcEEEEE
Q psy15995        472 LSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHE--HGLVAVGGADSKVHIYE  549 (683)
Q Consensus       472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~dg~i~i~d  549 (683)
                      -..........         .                  -............+..+.|.|.  |-.||+++.||.++||+
T Consensus        90 E~~~~~~~~~~---------~------------------Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYE  142 (361)
T KOG2445|consen   90 EQEKSEEAHGR---------R------------------WVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYE  142 (361)
T ss_pred             ecccccccccc---------e------------------eEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEe
Confidence            64222111000         0                  0011112234456788888885  66899999999999999


Q ss_pred             cCCCccCcceee------------cCCcCeeEEEECC---CCCEEEEEeCC-----CeEEEEECCCC--ccccccceeee
Q psy15995        550 LNNKSLSPKAEL------------DHLGPVTDCSFSP---SNEYLVASDAH-----RKVVLYRVPDF--ELAHNKEWGFH  607 (683)
Q Consensus       550 ~~~~~~~~~~~~------------~~~~~v~~~~~s~---~~~~l~~~~~d-----~~i~i~~~~~~--~~~~~~~~~~h  607 (683)
                      .....-.....+            .+..+-.|+.|+|   ...+||+|+.+     +.++||....+  +.....++.+|
T Consensus       143 A~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~  222 (361)
T KOG2445|consen  143 APDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDH  222 (361)
T ss_pred             cCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCC
Confidence            865422211111            2556678899987   35688888766     57899987643  44444555569


Q ss_pred             cccEEEEEecCC----CCeEEEeecCCcEEEEeCCCCc------------e-----e-eEeecCCCCCCeeEEEEc-cCC
Q psy15995        608 SAKVNCVAWSPD----SALVASGSLDTTIIIWSLASPA------------K-----H-IIIKNAHPQSQITRLQWL-DND  664 (683)
Q Consensus       608 ~~~v~~~~~s~d----~~~l~~~~~d~~v~iw~~~~~~------------~-----~-~~~~~~~~~~~v~~l~~~-~~~  664 (683)
                      ..+|++++|+|+    -.+||+++.|| |+||.+....            .     + ..-....|++.|..+.|. -+.
T Consensus       223 ~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGt  301 (361)
T KOG2445|consen  223 TDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGT  301 (361)
T ss_pred             CCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeee
Confidence            999999999996    35799999999 9999987311            0     1 111245589999999999 899


Q ss_pred             eEEEeeCCCcEEEEee
Q psy15995        665 LLVSVGQDCNTKIWEI  680 (683)
Q Consensus       665 ~l~s~~~d~~v~vw~~  680 (683)
                      .|.+.|.||+|++|+.
T Consensus       302 iLsStGdDG~VRLWka  317 (361)
T KOG2445|consen  302 ILSSTGDDGCVRLWKA  317 (361)
T ss_pred             EEeecCCCceeeehhh
Confidence            9999999999999974

>KOG1034|consensus

Probab=99.91  E-value=1.6e-22  Score=171.22  Aligned_cols=303  Identities=19%  Similarity=0.285  Sum_probs=220.8

Q ss_pred             eecCCcCeEEEEeec----CCCeEEEEeeCCCeEEEEcCCCCc---eeeec--cccccCeEEEEECCC----CCEEEEEc
Q psy15995        225 ISGQSKPINSCDFKP----SRPFRIITGSEDNTIAVFEGPPFK---FKMTK--QEHSRFVQAVRYSPS----GSHFASAG  291 (683)
Q Consensus       225 ~~~~~~~v~~~~~~~----~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~--~~~~~~v~~~~~~~~----~~~l~~~~  291 (683)
                      ...|..+|..++|++    +.+..+++.+. ..+.+|+.....   .++..  ..|......++|+-+    ..++|+++
T Consensus        34 ~ed~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G  112 (385)
T KOG1034|consen   34 KEDHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGG  112 (385)
T ss_pred             hccCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeec
Confidence            356788899999884    33334555444 678888754333   22222  136666777888764    34889999


Q ss_pred             CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccC-CCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEec
Q psy15995        292 FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPD-GTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ  370 (683)
Q Consensus       292 ~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (683)
                      .-|.|++.|+.++++...+..  |...|..+.+.|+ .+++++++.|..|++|++++..++..+                
T Consensus       113 ~~GvIrVid~~~~~~~~~~~g--hG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~Vf----------------  174 (385)
T KOG1034|consen  113 YLGVIRVIDVVSGQCSKNYRG--HGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVF----------------  174 (385)
T ss_pred             ceeEEEEEecchhhhccceec--cCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEe----------------
Confidence            999999999999999999876  9999999999995 478999999999999999999887665                


Q ss_pred             CCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcce------------
Q psy15995        371 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDR------------  438 (683)
Q Consensus       371 ~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~------------  438 (683)
                                               .-+.+|.+.|.++.|+++|.++++++.|.++++|++...+...            
T Consensus       175 -------------------------GG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~  229 (385)
T KOG1034|consen  175 -------------------------GGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNK  229 (385)
T ss_pred             -------------------------cccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCC
Confidence                                     2246799999999999999999999999999999987322100            


Q ss_pred             ---------------eccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEe
Q psy15995        439 ---------------VQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTV  503 (683)
Q Consensus       439 ---------------~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (683)
                                     .....|...|.++.|-++++++-+.++.|..|....-+........+...               
T Consensus       230 t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~---------------  294 (385)
T KOG1034|consen  230 TTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESA---------------  294 (385)
T ss_pred             ccCcCCccccccccccccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccc---------------
Confidence                           01134777888888889999999999999999874221110000000000               


Q ss_pred             ceEEEEeCCceeeeecC-CCCCc--EEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeec---CCcCeeEEEECCCCC
Q psy15995        504 KQISIVENGAKVSSLPI-DYEPS--SISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELD---HLGPVTDCSFSPSNE  577 (683)
Q Consensus       504 ~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~s~~~~  577 (683)
                              ......++. ...++  ..++.|-++.||.|...|.|.+||++.........+.   ....|...+||.|+.
T Consensus       295 --------~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs  366 (385)
T KOG1034|consen  295 --------TTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGS  366 (385)
T ss_pred             --------eeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCc
Confidence                    011111111 11233  3566778899999999999999999988764333332   456789999999999


Q ss_pred             EEEEEeCCCeEEEEECC
Q psy15995        578 YLVASDAHRKVVLYRVP  594 (683)
Q Consensus       578 ~l~~~~~d~~i~i~~~~  594 (683)
                      .|+...+|++|.-||.-
T Consensus       367 ~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  367 ILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             EEEEEeCCCcEEEEEee
Confidence            99999999999999853

>KOG0267|consensus

Probab=99.91  E-value=5.2e-24  Score=199.14  Aligned_cols=246  Identities=18%  Similarity=0.292  Sum_probs=218.7

Q ss_pred             CeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecce
Q psy15995         65 NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSI  144 (683)
Q Consensus        65 ~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  144 (683)
                      -.+.+||..      .+..|...|.|+..-..++.+++|+.|..+-+|.+.....+..+..|.              .+|
T Consensus        14 t~Lr~~~~~------~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~he--------------spI   73 (825)
T KOG0267|consen   14 TKLRVWDTR------EFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHE--------------SPI   73 (825)
T ss_pred             eccccccch------hhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccC--------------Ccc
Confidence            345566642      244688999999987788999999999999999998887777777776              889


Q ss_pred             eeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceee
Q psy15995        145 RNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGE  224 (683)
Q Consensus       145 ~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  224 (683)
                      .++.|.++..+|++|..+|+|++||++..+.+  ..+.+|...+.++.|+|-+.+.+.++.+.+  +.+|+.....+.+.
T Consensus        74 eSl~f~~~E~LlaagsasgtiK~wDleeAk~v--rtLtgh~~~~~sv~f~P~~~~~a~gStdtd--~~iwD~Rk~Gc~~~  149 (825)
T KOG0267|consen   74 ESLTFDTSERLLAAGSASGTIKVWDLEEAKIV--RTLTGHLLNITSVDFHPYGEFFASGSTDTD--LKIWDIRKKGCSHT  149 (825)
T ss_pred             eeeecCcchhhhcccccCCceeeeehhhhhhh--hhhhccccCcceeeeccceEEecccccccc--ceehhhhccCceee
Confidence            99999999999999999999999999988755  467788899999999999999977666655  78899988889999


Q ss_pred             eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC
Q psy15995        225 ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA  304 (683)
Q Consensus       225 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  304 (683)
                      +.+|...|..+.|+|+|.+ ++.+++|.+++|||...++....+..|...+.++.|+|..-++++|+.|+++++||+++-
T Consensus       150 ~~s~~~vv~~l~lsP~Gr~-v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletf  228 (825)
T KOG0267|consen  150 YKSHTRVVDVLRLSPDGRW-VASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETF  228 (825)
T ss_pred             ecCCcceeEEEeecCCCce-eeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeecccee
Confidence            9999999999999999996 999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEeccCCccccCeEEEEEccCCCEEEEEECC
Q psy15995        305 DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD  337 (683)
Q Consensus       305 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  337 (683)
                      +.+.....  ....|.+.+|+|++..+++|...
T Consensus       229 e~I~s~~~--~~~~v~~~~fn~~~~~~~~G~q~  259 (825)
T KOG0267|consen  229 EVISSGKP--ETDGVRSLAFNPDGKIVLSGEQI  259 (825)
T ss_pred             EEeeccCC--ccCCceeeeecCCceeeecCchh
Confidence            99888875  68899999999999988887654

>KOG4497|consensus

Probab=99.90  E-value=4.8e-22  Score=168.39  Aligned_cols=404  Identities=13%  Similarity=0.203  Sum_probs=250.4

Q ss_pred             EEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEE-ecCCCCEEEEeCCCccccccccccc
Q psy15995         49 VLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIAS-GDISGKVRIWDTVNKEHILKNEFHP  127 (683)
Q Consensus        49 ~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las-~~~dg~i~iwd~~~~~~~~~~~~~~  127 (683)
                      ..+|||+|+++|...+-.+.|-|.++-++.+.+. --+.|.-+.|+.|.-++.. .+.++.|.+|++...+-..++...+
T Consensus        13 ~c~fSp~g~yiAs~~~yrlviRd~~tlq~~qlf~-cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~   91 (447)
T KOG4497|consen   13 FCSFSPCGNYIASLSRYRLVIRDSETLQLHQLFL-CLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQ   91 (447)
T ss_pred             ceeECCCCCeeeeeeeeEEEEeccchhhHHHHHH-HHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCC
Confidence            3469999999999999999999999998877655 3667889999999877765 5788999999999988877777665


Q ss_pred             CCCCcccceeeeeecceeeeEeeccce-EEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecC
Q psy15995        128 IGGPIKDIGTLLSLTSIRNILVLSIGF-YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEG  206 (683)
Q Consensus       128 ~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~  206 (683)
                                    .++..+.|||||+ .|.+...+-.|.+|.+.+.+......   ....+..++|+|||++.+.+...
T Consensus        92 --------------agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~---pK~~~kg~~f~~dg~f~ai~sRr  154 (447)
T KOG4497|consen   92 --------------AGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPH---PKTNVKGYAFHPDGQFCAILSRR  154 (447)
T ss_pred             --------------CcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecc---cccCceeEEECCCCceeeeeecc
Confidence                          7789999999996 55566778999999999876543222   22556889999999988876543


Q ss_pred             CceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCE
Q psy15995        207 RERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSH  286 (683)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  286 (683)
                      .-.                                          ..+.+........+..+.-.+-..+.+.|+|||+.
T Consensus       155 DCk------------------------------------------dyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~  192 (447)
T KOG4497|consen  155 DCK------------------------------------------DYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNW  192 (447)
T ss_pred             cHH------------------------------------------HHHHHHhhHHHHHHHhcCCCcccccCceECCCCcE
Confidence            100                                          00111111122223333333444566777777766


Q ss_pred             EEEEcC--CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceece
Q psy15995        287 FASAGF--DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQ  364 (683)
Q Consensus       287 l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  364 (683)
                      |++-..  +-.|..|.              ..-.+..++|+|.+++|++|+.|+.+++.+--+-+...++.......   
T Consensus       193 laVwd~~Leykv~aYe--------------~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~---  255 (447)
T KOG4497|consen  193 LAVWDNVLEYKVYAYE--------------RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYH---  255 (447)
T ss_pred             EEEecchhhheeeeee--------------eccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhcc---
Confidence            654322  11121111              22356677778877788888888777776655444443332111100   


Q ss_pred             EEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCC-cceeccCC
Q psy15995        365 VSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE-NDRVQGAG  443 (683)
Q Consensus       365 ~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~-~~~~~~~~  443 (683)
                                     +....+...       .....-.....++.|.|..         -...+|...... .+....  
T Consensus       256 ---------------dp~~~~~~k-------e~~~~~ql~~~cLsf~p~~---------~~a~~~~~se~~YE~~~~p--  302 (447)
T KOG4497|consen  256 ---------------DPTLHLLEK-------ETFSIVQLLHHCLSFTPTD---------LEAHIWEESETIYEQQMTP--  302 (447)
T ss_pred             ---------------Cchhhhhhh-------hhcchhhhcccccccCCCc---------cccCccccchhhhhhhhcc--
Confidence                           000000000       0000001112344454431         011122211000 000000  


Q ss_pred             CCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeee-cCCC
Q psy15995        444 HGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSL-PIDY  522 (683)
Q Consensus       444 ~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  522 (683)
                                             +++-.+                                        ++.... ....
T Consensus       303 -----------------------v~~~~l----------------------------------------kp~tD~pnPk~  319 (447)
T KOG4497|consen  303 -----------------------VKVHKL----------------------------------------KPPTDFPNPKC  319 (447)
T ss_pred             -----------------------eeeecc----------------------------------------cCCCCCCCccc
Confidence                                   000000                                        000000 0123


Q ss_pred             CCcEEEEccCCCEEEEEcCC--CcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCcccc
Q psy15995        523 EPSSISLDHEHGLVAVGGAD--SKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAH  600 (683)
Q Consensus       523 ~~~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~  600 (683)
                      .+.-++|++|..++++-.+.  +.+.+||+...++....  ....+|.+..|.|....|+.+....++++|.......+.
T Consensus       320 g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avL--iQk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~  397 (447)
T KOG4497|consen  320 GAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVL--IQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVG  397 (447)
T ss_pred             ccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhh--hhccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEe
Confidence            56789999999999987653  56999999987765333  367789999999999999998888889999987755544


Q ss_pred             ccceeeecccEEEEEecCCCCeEEEeecCC
Q psy15995        601 NKEWGFHSAKVNCVAWSPDSALVASGSLDT  630 (683)
Q Consensus       601 ~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~  630 (683)
                      ...   ..-.|..++|..+|..++..+.|.
T Consensus       398 vP~---~GF~i~~l~W~~~g~~i~l~~kDa  424 (447)
T KOG4497|consen  398 VPK---KGFNIQKLQWLQPGEFIVLCGKDA  424 (447)
T ss_pred             cCC---CCceeeeEEecCCCcEEEEEcCCc
Confidence            333   336799999999999999999886

>KOG4328|consensus

Probab=99.90  E-value=9.2e-22  Score=174.28  Aligned_cols=303  Identities=16%  Similarity=0.196  Sum_probs=226.1

Q ss_pred             CceeeeecCCcCeEEEEeecCCC-eEEEEeeCCCeEEEEcCCC----CceeeeccccccCeEEEEECCCCC-EEEEEcCC
Q psy15995        220 TSVGEISGQSKPINSCDFKPSRP-FRIITGSEDNTIAVFEGPP----FKFKMTKQEHSRFVQAVRYSPSGS-HFASAGFD  293 (683)
Q Consensus       220 ~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~i~iw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d  293 (683)
                      ......+-+..+|++++|+|..+ .++++|..-|.|-+||+.+    ..-+..+..|..+|.++.|+|... .+++.+.|
T Consensus       177 ~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyD  256 (498)
T KOG4328|consen  177 RILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYD  256 (498)
T ss_pred             eecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccC
Confidence            34456677899999999999877 6789999999999999852    223456778999999999999654 88999999


Q ss_pred             CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEe-cCC
Q psy15995        294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW-QGD  372 (683)
Q Consensus       294 g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  372 (683)
                      |+|++-|++.......+........+..+.|+.+...++.+..=|.+.+||++++.........+...+..+.+.| ...
T Consensus       257 GtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~  336 (498)
T KOG4328|consen  257 GTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPW  336 (498)
T ss_pred             ceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCch
Confidence            9999999988754444433225556788889988888888888889999999987764333334444778888888 567


Q ss_pred             EEEEEecCCcEEEEecCCCCc---ceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC----CCCcceeccCCCC
Q psy15995        373 YLLTVSLSGFISYLDVNNPST---PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK----TGENDRVQGAGHG  445 (683)
Q Consensus       373 ~l~~~~~~g~i~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~----~~~~~~~~~~~~~  445 (683)
                      ++++++.|++.++||++.-..   +......|...|.+..|||.+..|++.+.|..|+|||..    ..+....+.  |.
T Consensus       337 ~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~--Hn  414 (498)
T KOG4328|consen  337 FLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIP--HN  414 (498)
T ss_pred             heeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceee--cc
Confidence            899999999999999985332   334455799999999999998889999999999999974    111111111  11


Q ss_pred             cceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCc
Q psy15995        446 NQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPS  525 (683)
Q Consensus       446 ~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  525 (683)
                      ..-      ++             |                                                   -.+-
T Consensus       415 ~~t------~R-------------w---------------------------------------------------lT~f  424 (498)
T KOG4328|consen  415 NRT------GR-------------W---------------------------------------------------LTPF  424 (498)
T ss_pred             Ccc------cc-------------c---------------------------------------------------ccch
Confidence            000      00             0                                                   0123


Q ss_pred             EEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeE-EEECCCCC-EEEEEeCCCeEEEEECC
Q psy15995        526 SISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTD-CSFSPSNE-YLVASDAHRKVVLYRVP  594 (683)
Q Consensus       526 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~s~~~~-~l~~~~~d~~i~i~~~~  594 (683)
                      ...|.|+..++++|..-..|-|+|-..++.+.....+....|.+ ..|+|-+. +++.++..|.|+||--+
T Consensus       425 KA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k  495 (498)
T KOG4328|consen  425 KAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK  495 (498)
T ss_pred             hheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEEEEecC
Confidence            45788999999999999999999999998765544444444554 47999777 55556678889988654

>KOG0302|consensus

Probab=99.90  E-value=5.5e-22  Score=171.15  Aligned_cols=250  Identities=19%  Similarity=0.303  Sum_probs=189.4

Q ss_pred             eeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc----------------CCCceeeeecCCcCeEEEEeecC
Q psy15995        177 LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE----------------TGTSVGEISGQSKPINSCDFKPS  240 (683)
Q Consensus       177 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~v~~~~~~~~  240 (683)
                      ......+|.+.+..+.-++-++-.++++-.....+.||+..                ..+++.++.+|...=..++|+|-
T Consensus       143 ~~~~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~  222 (440)
T KOG0302|consen  143 IEMKSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPI  222 (440)
T ss_pred             ccccccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccc
Confidence            34444556677777777776655555554444446777764                24577788999999999999996


Q ss_pred             CCeEEEEeeCCCeEEEEcCCCCceee---eccccccCeEEEEECCCCC-EEEEEcCCCcEEEEeCCCCeeEEeccCCccc
Q psy15995        241 RPFRIITGSEDNTIAVFEGPPFKFKM---TKQEHSRFVQAVRYSPSGS-HFASAGFDGKVFLYDGASADLVSELGNPAHK  316 (683)
Q Consensus       241 ~~~~l~~~~~d~~i~iw~~~~~~~~~---~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~  316 (683)
                      ..-.|++|..-+.|++|...++....   .+.+|+..|-.++|||..+ .|++|+.||+|+|||++.+.....+...+|.
T Consensus       223 ~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~  302 (440)
T KOG0302|consen  223 KTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHN  302 (440)
T ss_pred             cccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccC
Confidence            55569999999999999988876543   4567999999999999755 8899999999999999998544444446699


Q ss_pred             cCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCccee
Q psy15995        317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIR  396 (683)
Q Consensus       317 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~  396 (683)
                      +.|..+.|+.+-.+|++|+.||+++|||++..+.                                         ..++.
T Consensus       303 sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~-----------------------------------------~~pVA  341 (440)
T KOG0302|consen  303 SDVNVISWNRREPLLASGGDDGTLSIWDLRQFKS-----------------------------------------GQPVA  341 (440)
T ss_pred             CceeeEEccCCcceeeecCCCceEEEEEhhhccC-----------------------------------------CCcce
Confidence            9999999999888999999999999999987553                                         45667


Q ss_pred             eeeeccccEEEEEEeCC-CCEEEEEeCCCcEEEEcCCCCCcce-----------------eccCCCCcceeEEEEe---C
Q psy15995        397 VIKGHNKPITALALSPD-RGTVFTGSHDGFITRWNAKTGENDR-----------------VQGAGHGNQINGMKAT---G  455 (683)
Q Consensus       397 ~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~w~~~~~~~~~-----------------~~~~~~~~~v~~~~~~---~  455 (683)
                      .++.|..+|+++.|+|. ...+++++.|..|.+||+....-..                 .+...-...+..+.|+   .
T Consensus       342 ~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiP  421 (440)
T KOG0302|consen  342 TFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIP  421 (440)
T ss_pred             eEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCC
Confidence            78899999999999994 4678888999999999986433210                 0111123455566666   6


Q ss_pred             CeEEEEEcCCeE
Q psy15995        456 ELLYTCGIDDTI  467 (683)
Q Consensus       456 ~~l~~~~~d~~i  467 (683)
                      .++++.+.||.-
T Consensus       422 G~lvsTa~dGfn  433 (440)
T KOG0302|consen  422 GLLVSTAIDGFN  433 (440)
T ss_pred             CeEEEeccccee
Confidence            677777777643

>KOG0307|consensus

Probab=99.90  E-value=6.8e-23  Score=202.62  Aligned_cols=290  Identities=19%  Similarity=0.284  Sum_probs=222.5

Q ss_pred             eeccCCCCCCceeecCCCCCCceeee--cccceee------------cCCCcccCCCeEEEeeCCCCCe----EEEe-cC
Q psy15995          4 ATLPRTQRGQPIVLGGDPKGKNFLYT--NGNKYIF------------ATLPRTQRGQPIVLGGDPKGKN----FLYT-NG   64 (683)
Q Consensus         4 ~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~------------~~~~~~~~~~~~~~~~s~~~~~----l~~~-~~   64 (683)
                      +.+.++|++..+...|+..+......  ....+++            .--+.....+...++|++.|..    ||.| .+
T Consensus        10 a~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~ed   89 (1049)
T KOG0307|consen   10 ATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGLED   89 (1049)
T ss_pred             ceEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCccceeeccccC
Confidence            45678888865666666554443211  1111111            1112222345678999988887    6766 68


Q ss_pred             CeEEEEeCCC------CcccccccCcccceEEEEECCCCc-EEEEecCCCCEEEEeCCCcccccccccccCCCCccccee
Q psy15995         65 NSVIIRNIEN------PAISDIYTEHSCAVNVAKYSPSGF-YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGT  137 (683)
Q Consensus        65 ~~i~v~~~~~------~~~~~~~~~h~~~v~~~~~s~d~~-~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  137 (683)
                      |.|.+||...      ...+.++..|++.|..+.|++.+. +||+|+.||.|.|||+.+-+.-....            .
T Consensus        90 G~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~------------~  157 (1049)
T KOG0307|consen   90 GNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG------------S  157 (1049)
T ss_pred             CceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC------------C
Confidence            9999999865      245677889999999999999665 99999999999999998865443332            1


Q ss_pred             eeeecceeeeEeecc-ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCe-EEEE-ecCCceEEEEE
Q psy15995        138 LLSLTSIRNILVLSI-GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQR-MVVV-GEGRERFGHVF  214 (683)
Q Consensus       138 ~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~-~~~~~~~~~~~  214 (683)
                      ......|.+++|... ...||+++.+|.+.|||++..+.+...........+..++|+|+... ++++ .+++...+.+|
T Consensus       158 ~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlW  237 (1049)
T KOG0307|consen  158 QAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLW  237 (1049)
T ss_pred             CCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEee
Confidence            112267888999874 45788999999999999999988777766655567889999998743 3333 34455567788


Q ss_pred             Ecc-CCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCC-EEEEEcC
Q psy15995        215 MSE-TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGS-HFASAGF  292 (683)
Q Consensus       215 ~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~  292 (683)
                      +.+ ...+++++.+|...|.++.|++.+..++++++.|+.|.+|+.++++.+..+....+++..+.|+|... .+++++.
T Consensus       238 DlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asf  317 (1049)
T KOG0307|consen  238 DLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASF  317 (1049)
T ss_pred             cccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhhee
Confidence            866 45688889999999999999999977799999999999999999999999998899999999999877 7888899


Q ss_pred             CCcEEEEeCCCCe
Q psy15995        293 DGKVFLYDGASAD  305 (683)
Q Consensus       293 dg~i~iw~~~~~~  305 (683)
                      ||.|.|+.+.+..
T Consensus       318 dgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  318 DGKISIYSLQGTD  330 (1049)
T ss_pred             ccceeeeeeecCC
Confidence            9999999987654

>KOG0267|consensus

Probab=99.89  E-value=2.3e-23  Score=194.89  Aligned_cols=230  Identities=24%  Similarity=0.412  Sum_probs=199.3

Q ss_pred             CcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEecccccee
Q psy15995         97 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHI  176 (683)
Q Consensus        97 ~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~  176 (683)
                      +.+++....+-.+++||.+....      |.              ..+.++..-..++.+++|+.|..+-+|.+.....+
T Consensus         4 ~~~~m~~~~~t~Lr~~~~~~~~~------hs--------------aav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i   63 (825)
T KOG0267|consen    4 MEFLMKTKRATKLRVWDTREFVA------HS--------------AAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAI   63 (825)
T ss_pred             ccccceeeeeeccccccchhhhh------hh--------------hhhceeeeeccceeeccCCCceeeccccccCCchh
Confidence            33455555666788888754421      21              45666666677889999999999999998765544


Q ss_pred             eeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEE
Q psy15995        177 LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAV  256 (683)
Q Consensus       177 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i  256 (683)
                        ..+.+|..+|.++.|+++..+++++..++.  +.+|+++.++.++.+.+|...+..+.|+|-+.+ .+.|+.|+.+++
T Consensus        64 --~S~~~hespIeSl~f~~~E~Llaagsasgt--iK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~-~a~gStdtd~~i  138 (825)
T KOG0267|consen   64 --TSLTGHESPIESLTFDTSERLLAAGSASGT--IKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEF-FASGSTDTDLKI  138 (825)
T ss_pred             --heeeccCCcceeeecCcchhhhcccccCCc--eeeeehhhhhhhhhhhccccCcceeeeccceEE-ecccccccccee
Confidence              347788999999999999998888877654  899999999999999999999999999999997 799999999999


Q ss_pred             EcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC
Q psy15995        257 FEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG  336 (683)
Q Consensus       257 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  336 (683)
                      ||.+...+...+.+|...+..++|+|+|++++.++.|..+++||...|+....+..  |.+.+..+.|+|..-+++.|+.
T Consensus       139 wD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~--~e~~v~sle~hp~e~Lla~Gs~  216 (825)
T KOG0267|consen  139 WDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKS--HEGKVQSLEFHPLEVLLAPGSS  216 (825)
T ss_pred             hhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccccccccccccc--ccccccccccCchhhhhccCCC
Confidence            99999999999999999999999999999999999999999999999999999976  9999999999999999999999


Q ss_pred             CCcEEEEECCCCceeeE
Q psy15995        337 DKTCKLWDIETKSVVSE  353 (683)
Q Consensus       337 dg~i~iwd~~~~~~~~~  353 (683)
                      |+++++||+++.+.+..
T Consensus       217 d~tv~f~dletfe~I~s  233 (825)
T KOG0267|consen  217 DRTVRFWDLETFEVISS  233 (825)
T ss_pred             CceeeeeccceeEEeec
Confidence            99999999998766543

>KOG1009|consensus

Probab=99.89  E-value=2.2e-21  Score=169.28  Aligned_cols=316  Identities=19%  Similarity=0.306  Sum_probs=209.4

Q ss_pred             CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC---------ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEE
Q psy15995        229 SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF---------KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLY  299 (683)
Q Consensus       229 ~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  299 (683)
                      ..++.++.|.++....+++|+.|..|++|-+...         +....+..|...|+++.|+|+|+.||+|+.+|.|.+|
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW   92 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW   92 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence            4578889999888767999999999999975432         2345677899999999999999999999999999999


Q ss_pred             eCC--------C------CeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceE
Q psy15995        300 DGA--------S------ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQV  365 (683)
Q Consensus       300 ~~~--------~------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  365 (683)
                      ...        +      ...+......+|...|..++|+|++.++++++.|..+++||+..++....            
T Consensus        93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~------------  160 (434)
T KOG1009|consen   93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAI------------  160 (434)
T ss_pred             EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEee------------
Confidence            755        2      11222222234899999999999999999999999999999999876543            


Q ss_pred             EEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCC
Q psy15995        366 SCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHG  445 (683)
Q Consensus       366 ~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~  445 (683)
                                                      +..|...+..++|.|-++++++-+.|...+.+.+...+.......   
T Consensus       161 --------------------------------~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~---  205 (434)
T KOG1009|consen  161 --------------------------------LDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGL---  205 (434)
T ss_pred             --------------------------------ccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeee---
Confidence                                            356888899999999999999988888666666554433222110   


Q ss_pred             cceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCc
Q psy15995        446 NQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPS  525 (683)
Q Consensus       446 ~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  525 (683)
                      ....+-...      .......+++.=++                                             .+.-..
T Consensus       206 ~~m~~~~~~------~~e~~s~rLfhDeT---------------------------------------------lksFFr  234 (434)
T KOG1009|consen  206 DIMPAKAFN------EREGKSTRLFHDET---------------------------------------------LKSFFR  234 (434)
T ss_pred             eEeeecccC------CCCcceeeeeecCc---------------------------------------------hhhhhh
Confidence            000000000      00001111111111                                             111235


Q ss_pred             EEEEccCCCEEEEEcC----CC-----cEEEEEcCCCccCcceeecCCcCeeEEEECC-----------------CCCEE
Q psy15995        526 SISLDHEHGLVAVGGA----DS-----KVHIYELNNKSLSPKAELDHLGPVTDCSFSP-----------------SNEYL  579 (683)
Q Consensus       526 ~~~~~~~~~~l~~~~~----dg-----~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~-----------------~~~~l  579 (683)
                      .++|+|+|.+|++...    .+     ..++|+-...+...........+...+.|+|                 --+.+
T Consensus       235 RlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlv  314 (434)
T KOG1009|consen  235 RLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLV  314 (434)
T ss_pred             hcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceE
Confidence            5678888888877543    12     2344443322221111112333344444433                 01233


Q ss_pred             EEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCcee
Q psy15995        580 VASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKH  643 (683)
Q Consensus       580 ~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~  643 (683)
                      ++....+.|.+||.++.+.......- |-..|+.++|++||..|+..+.||...+-.++..+.-
T Consensus       315 faiAt~~svyvydtq~~~P~~~v~ni-hy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~elg  377 (434)
T KOG1009|consen  315 FAIATKNSVYVYDTQTLEPLAVVDNI-HYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWELG  377 (434)
T ss_pred             EEEeecceEEEeccccccceEEEeee-eeeeecceeecCCCcEEEEeccCCceEEEEEcchhcc
Confidence            33344567999999987776554444 8999999999999999999999998777776665543

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.89  E-value=9.1e-19  Score=177.88  Aligned_cols=372  Identities=27%  Similarity=0.449  Sum_probs=280.4

Q ss_pred             cccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc-cccccccccCCCCcccceeeeeecceeeeEe-eccce-EE
Q psy15995         80 IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE-HILKNEFHPIGGPIKDIGTLLSLTSIRNILV-LSIGF-YI  156 (683)
Q Consensus        80 ~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~~~-~l  156 (683)
                      .+..|...|.++.+.+.+..++.++.|+.+.+|+...+. .+..+.....             ..+..+.+ .+++. .+
T Consensus        60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~  126 (466)
T COG2319          60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHD-------------SSVSKLALSSPDGNSIL  126 (466)
T ss_pred             eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCC-------------CceeeEEEECCCcceEE
Confidence            466899999999999999999999999999999998886 4444333210             24555555 77776 55


Q ss_pred             EeecC-CccEEEEeccc-cceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEE
Q psy15995        157 ASGDI-SGKVRIWDTVN-KEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINS  234 (683)
Q Consensus       157 ~~~~~-d~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  234 (683)
                      +..+. |+.+.+|+... ..  ....+..|...|..++|+|++..++.++. .+..+.+|+...+..+..+.+|...|.+
T Consensus       127 ~~~~~~d~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~  203 (466)
T COG2319         127 LASSSLDGTVKLWDLSTPGK--LIRTLEGHSESVTSLAFSPDGKLLASGSS-LDGTIKLWDLRTGKPLSTLAGHTDPVSS  203 (466)
T ss_pred             eccCCCCccEEEEEecCCCe--EEEEEecCcccEEEEEECCCCCEEEecCC-CCCceEEEEcCCCceEEeeccCCCceEE
Confidence            55444 99999999987 33  33445567789999999999997777654 3445788888888899999999999999


Q ss_pred             EEeecCCCeEEEEeeCCCeEEEEcCCCCceee-eccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee-EEeccC
Q psy15995        235 CDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM-TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL-VSELGN  312 (683)
Q Consensus       235 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~  312 (683)
                      ++|+|+++..+++++.|+.+++||...+.... .+..|.... ...|+|++..+++++.|+.+++|+...... ...+  
T Consensus       204 ~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--  280 (466)
T COG2319         204 LAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTL--  280 (466)
T ss_pred             EEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEE--
Confidence            99999998545556999999999988777777 688888875 448999998899999999999999987664 4444  


Q ss_pred             CccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEE-ecCcceeceEEEEecCCEEEEE-ecCCcEEEEecCC
Q psy15995        313 PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFI-MGNQVEDQQVSCLWQGDYLLTV-SLSGFISYLDVNN  390 (683)
Q Consensus       313 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~-~~~g~i~~~~~~~  390 (683)
                      ..|...+.++.|.|++..+++++.|+.+.+|+........... ..+......+.+.+++..+..+ ..++.+.+|+...
T Consensus       281 ~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  360 (466)
T COG2319         281 SGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRT  360 (466)
T ss_pred             ecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCC
Confidence            3478999999999988888889889889999998887666654 2222234445452232455555 6778899999887


Q ss_pred             CCcceeeeeeccccEEEEEEeCCCCEEEE-EeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe--CCeEEEEEcCCeE
Q psy15995        391 PSTPIRVIKGHNKPITALALSPDRGTVFT-GSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTI  467 (683)
Q Consensus       391 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i  467 (683)
                      .. ....... ...+..+.+.+ ...+.. +..++.+.+|+.............. ..+....+.  +..++.++.++.+
T Consensus       361 ~~-~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  436 (466)
T COG2319         361 GK-PLKTLEG-HSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHT-SRVTSLDFSPDGKSLASGSSDNTI  436 (466)
T ss_pred             Cc-eeEEecC-CceEEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCCC-CcEEEEEECCCCcEEEEecCCCcE
Confidence            55 2222222 22288888888 544444 6889999999999887766654332 455555555  6777888999999


Q ss_pred             EEEeCCC
Q psy15995        468 KQVDLSS  474 (683)
Q Consensus       468 ~~~~~~~  474 (683)
                      ++|+...
T Consensus       437 ~~~~~~~  443 (466)
T COG2319         437 RLWDLKT  443 (466)
T ss_pred             EEEeccC
Confidence            9999887

>KOG0270|consensus

Probab=99.89  E-value=2e-21  Score=171.63  Aligned_cols=282  Identities=14%  Similarity=0.172  Sum_probs=204.1

Q ss_pred             CCCCCceeecCCCCCCcee----eecccceeecCCCcccCCCeEEEee-------CCCCCeEEEe-cCCeEEEEeCCCCc
Q psy15995          9 TQRGQPIVLGGDPKGKNFL----YTNGNKYIFATLPRTQRGQPIVLGG-------DPKGKNFLYT-NGNSVIIRNIENPA   76 (683)
Q Consensus         9 ~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-------s~~~~~l~~~-~~~~i~v~~~~~~~   76 (683)
                      -|....|+..-..++...+    +....+..|...-.-.+..+.|+.|       ...|+++|.| -+..|.|||+.-..
T Consensus       134 ~psDnlIl~ar~eddvs~LEvYVyn~~e~nlYvHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d  213 (463)
T KOG0270|consen  134 KPSDNLILCARNEDDVSYLEVYVYNEEEENLYVHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVD  213 (463)
T ss_pred             ccCCcEEEEeeccCCceEEEEEEEcCCCcceeEecceeccCcchhhhhhhcCCCCCCCcceEEEeccCceeEEecccccc
Confidence            3666666666665555433    2233333444333333344455544       2357799998 47899999986321


Q ss_pred             ---ccc------------------cccCcccceEEEEECCCC-cEEEEecCCCCEEEEeCCCcccccccccccCCCCccc
Q psy15995         77 ---ISD------------------IYTEHSCAVNVAKYSPSG-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKD  134 (683)
Q Consensus        77 ---~~~------------------~~~~h~~~v~~~~~s~d~-~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  134 (683)
                         +..                  .-.+|+..|.+++|+.+- ..|||||.|.+|++||+.++++...+..|.       
T Consensus       214 ~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~-------  286 (463)
T KOG0270|consen  214 AVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHG-------  286 (463)
T ss_pred             ccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcC-------
Confidence               101                  123799999999999855 578999999999999999999988888665       


Q ss_pred             ceeeeeecceeeeEeecc-ceEEEeecCCccEEEEecccccee-eeccccccCCCeeEEEEcCCCCeEEEEecCCceEEE
Q psy15995        135 IGTLLSLTSIRNILVLSI-GFYIASGDISGKVRIWDTVNKEHI-LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH  212 (683)
Q Consensus       135 ~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~  212 (683)
                             ..|.++.|.|. ..+|++|+.|++|.+.|....... ....   ..+.|..++|.|.....+.++.+... ++
T Consensus       287 -------k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk---~~g~VEkv~w~~~se~~f~~~tddG~-v~  355 (463)
T KOG0270|consen  287 -------KKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK---FDGEVEKVAWDPHSENSFFVSTDDGT-VY  355 (463)
T ss_pred             -------CceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE---eccceEEEEecCCCceeEEEecCCce-EE
Confidence                   78999999995 679999999999999999842211 1122   24889999999998888888766544 34


Q ss_pred             EEEcc-CCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee--eeccccccCeEEEEECCCCC-EEE
Q psy15995        213 VFMSE-TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK--MTKQEHSRFVQAVRYSPSGS-HFA  288 (683)
Q Consensus       213 ~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~-~l~  288 (683)
                      -++.+ .++++.+++.|.++|.++++++..+.++++++.|+.+++|++......  ......-+...|.++.|+-. .++
T Consensus       356 ~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la  435 (463)
T KOG0270|consen  356 YFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLA  435 (463)
T ss_pred             eeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCCcceEEE
Confidence            44444 579999999999999999999999999999999999999996544332  21111223467788888765 677


Q ss_pred             EEcCCCcEEEEeCCCCeeEE
Q psy15995        289 SAGFDGKVFLYDGASADLVS  308 (683)
Q Consensus       289 ~~~~dg~i~iw~~~~~~~~~  308 (683)
                      .|+..+.+++||+.+...+.
T Consensus       436 ~GG~k~~~~vwd~~~~~~V~  455 (463)
T KOG0270|consen  436 FGGEKAVLRVWDIFTNSPVR  455 (463)
T ss_pred             ecCccceEEEeecccChhHH
Confidence            88888889999988776543

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.89  E-value=3.1e-18  Score=174.02  Aligned_cols=373  Identities=27%  Similarity=0.434  Sum_probs=281.3

Q ss_pred             ccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC-ceeeeecCCc-CeEEEEe-ecCCCeEEEEe-eCCCeEEE
Q psy15995        181 FHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT-SVGEISGQSK-PINSCDF-KPSRPFRIITG-SEDNTIAV  256 (683)
Q Consensus       181 ~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~v~~~~~-~~~~~~~l~~~-~~d~~i~i  256 (683)
                      ...+...+..+.+.+.+..++..+.+.  .+.+|+...+. ....+..+.. .+..+.+ .+++...++.. ..|+.+.+
T Consensus        61 ~~~~~~~i~~~~~~~~~~~~~~~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  138 (466)
T COG2319          61 LRGHEDSITSIAFSPDGELLLSGSSDG--TIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKL  138 (466)
T ss_pred             eeeccceEEEEEECCCCcEEEEecCCC--cEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEE
Confidence            345668899999999999998887443  36788877776 6667776443 7777777 77777334444 44999999


Q ss_pred             EcCCC-CceeeeccccccCeEEEEECCCCCEEEEEcC-CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCC-EEEE
Q psy15995        257 FEGPP-FKFKMTKQEHSRFVQAVRYSPSGSHFASAGF-DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGT-QLLT  333 (683)
Q Consensus       257 w~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~  333 (683)
                      |+... ......+..|...|..++|+|+++.+++++. ++.+++|+...+..+..+..  |...+.+++|+|++. .+++
T Consensus       139 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~  216 (466)
T COG2319         139 WDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAG--HTDPVSSLAFSPDGGLLIAS  216 (466)
T ss_pred             EEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeecc--CCCceEEEEEcCCcceEEEE
Confidence            99988 7888889999999999999999998888885 99999999998888888876  899999999999998 5555


Q ss_pred             EECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCC
Q psy15995        334 ASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPD  413 (683)
Q Consensus       334 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  413 (683)
                      ++.|+.+++||...+.........+.... ...+.+++..+++++.++.+++|+..........+..|...+.++.|.|+
T Consensus       217 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  295 (466)
T COG2319         217 GSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPD  295 (466)
T ss_pred             ecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCC
Confidence            58999999999887766663222222222 22677788888899999999999998766534444678899999999998


Q ss_pred             CCEEEEEeCCCcEEEEcCCCCCcceecc-CCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceee
Q psy15995        414 RGTVFTGSHDGFITRWNAKTGENDRVQG-AGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLD  492 (683)
Q Consensus       414 ~~~l~~~~~dg~i~~w~~~~~~~~~~~~-~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~  492 (683)
                      +..+++++.|+.+.+|+........... ..|..                                              
T Consensus       296 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------  329 (466)
T COG2319         296 GKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEG----------------------------------------------  329 (466)
T ss_pred             CCEEEEeeCCCcEEEEEcCCCceEEEeeecccCC----------------------------------------------
Confidence            8899889999889999877665443331 11111                                              


Q ss_pred             ecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEE-cCCCcEEEEEcCCCccCcceeecCCcCeeEEE
Q psy15995        493 IDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVG-GADSKVHIYELNNKSLSPKAELDHLGPVTDCS  571 (683)
Q Consensus       493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~  571 (683)
                                                    .+..+.+.+++..++.+ ..|+.+.+|+.....  ..........+..+.
T Consensus       330 ------------------------------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~  377 (466)
T COG2319         330 ------------------------------PVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK--PLKTLEGHSNVLSVS  377 (466)
T ss_pred             ------------------------------ceEEEEECCCCCEEEEeecCCCcEEeeecCCCc--eeEEecCCceEEEEE
Confidence                                          23444442222344444 577888889988776  122222333388899


Q ss_pred             ECCCCCEEEE-EeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCC
Q psy15995        572 FSPSNEYLVA-SDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLAS  639 (683)
Q Consensus       572 ~s~~~~~l~~-~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~  639 (683)
                      +++ ...... +..++.+.+|+............  +...+....+++++..+++++.++.+++|+...
T Consensus       378 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (466)
T COG2319         378 FSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDG--HTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKT  443 (466)
T ss_pred             ECC-CCCEEEEecCCCceEEEecccCeeeeeccC--CCCcEEEEEECCCCcEEEEecCCCcEEEEeccC
Confidence            988 544444 68899999999998777654432  117899999999999999999999999999988

>KOG2919|consensus

Probab=99.89  E-value=5.1e-21  Score=161.82  Aligned_cols=285  Identities=16%  Similarity=0.187  Sum_probs=204.7

Q ss_pred             EEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEee-------ccceEEEeecCC
Q psy15995         90 VAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVL-------SIGFYIASGDIS  162 (683)
Q Consensus        90 ~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-------~~~~~l~~~~~d  162 (683)
                      .+.|||||..|.+-+.|..+.+|++.....-........ ......-.......|-..+|.       |+..++|+.+.+
T Consensus        54 gckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~-~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~  132 (406)
T KOG2919|consen   54 GCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLN-FSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRD  132 (406)
T ss_pred             cceeCCCCceEEeecccCeeeEEecChhhcccCCCCccc-cccceeEEeccCCEEEEEEeeeccccCCCccceeeecccc
Confidence            568999999999999999999999865421111100000 000000011112334444444       567799999999


Q ss_pred             ccEEEEeccccceeeeccccccCC---CeeEEEEcCCCCeEEEEecCCceEEEEEEc-cCCCceee-------eecCCcC
Q psy15995        163 GKVRIWDTVNKEHILKNEFHPIGG---PIKDIAWSPDNQRMVVVGEGRERFGHVFMS-ETGTSVGE-------ISGQSKP  231 (683)
Q Consensus       163 ~~i~iwd~~~~~~~~~~~~~~~~~---~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~  231 (683)
                      .-|.+||.-+|+....+..-.|..   ...+++|+|||..|+++....   +++++. ..|.....       -.+..+.
T Consensus       133 ~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrc---irvFdt~RpGr~c~vy~t~~~~k~gq~gi  209 (406)
T KOG2919|consen  133 QPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRC---IRVFDTSRPGRDCPVYTTVTKGKFGQKGI  209 (406)
T ss_pred             CceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccce---EEEeeccCCCCCCcchhhhhcccccccce
Confidence            999999999998766655444443   457899999999999876543   677777 34442222       2234677


Q ss_pred             eEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC-CCcEEEEeCCCC-eeEEe
Q psy15995        232 INSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF-DGKVFLYDGASA-DLVSE  309 (683)
Q Consensus       232 v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~-~~~~~  309 (683)
                      +.+++|+|.....++.++....+-|+.-..+..+..+.+|.+.|+.+.|.++|+.|++|.. +-.|..||++.- .++..
T Consensus       210 isc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~  289 (406)
T KOG2919|consen  210 ISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYA  289 (406)
T ss_pred             eeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhh
Confidence            8999999998877999999999999999999999999999999999999999999999986 678999999864 44445


Q ss_pred             ccCCcccc---CeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEE
Q psy15995        310 LGNPAHKG---GVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYL  386 (683)
Q Consensus       310 ~~~~~~~~---~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~  386 (683)
                      +..  |..   .-.-....|+++.|++|+.||.|++||+....                                     
T Consensus       290 L~r--hv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~g-------------------------------------  330 (406)
T KOG2919|consen  290 LER--HVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLG-------------------------------------  330 (406)
T ss_pred             hhh--hccCccceEEEecCCCCceeeccCCCccEEEEecCCCC-------------------------------------
Confidence            543  433   22233446788999999999999999987622                                     


Q ss_pred             ecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCC
Q psy15995        387 DVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHD  423 (683)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  423 (683)
                            .+...+..+...++.++++|--..+++++..
T Consensus       331 ------n~~sv~~~~sd~vNgvslnP~mpilatssGq  361 (406)
T KOG2919|consen  331 ------NEVSVTGNYSDTVNGVSLNPIMPILATSSGQ  361 (406)
T ss_pred             ------CcccccccccccccceecCcccceeeeccCc
Confidence                  1223345678889999999987777777643

>KOG4497|consensus

Probab=99.88  E-value=1.1e-20  Score=160.24  Aligned_cols=386  Identities=16%  Similarity=0.164  Sum_probs=226.8

Q ss_pred             EEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc
Q psy15995        190 DIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ  269 (683)
Q Consensus       190 ~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~  269 (683)
                      -..|||+|+++|++...+   ..+.+.++-+....+. --+.|..+.|..+..+.+.....++.|.+|++..-+....+.
T Consensus        13 ~c~fSp~g~yiAs~~~yr---lviRd~~tlq~~qlf~-cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckId   88 (447)
T KOG4497|consen   13 FCSFSPCGNYIASLSRYR---LVIRDSETLQLHQLFL-CLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKID   88 (447)
T ss_pred             ceeECCCCCeeeeeeeeE---EEEeccchhhHHHHHH-HHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEec
Confidence            478999999999988763   4555555444333222 245688899999998888888999999999999988888888


Q ss_pred             ccccCeEEEEECCCCCE-EEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECC--
Q psy15995        270 EHSRFVQAVRYSPSGSH-FASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIE--  346 (683)
Q Consensus       270 ~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~--  346 (683)
                      ....++.+++|||||+. |.+...+-+|.+|++.+.+....-.   .+..+..++|+|||++.+.+++-......++.  
T Consensus        89 eg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~---pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c  165 (447)
T KOG4497|consen   89 EGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPH---PKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSC  165 (447)
T ss_pred             cCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecc---cccCceeEEECCCCceeeeeecccHHHHHHHHhh
Confidence            88999999999999975 4556668899999998877655432   44567899999999998888764222111111  


Q ss_pred             -CCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCc
Q psy15995        347 -TKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGF  425 (683)
Q Consensus       347 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  425 (683)
                       .-..+..+.. .......+..+|+|..+++         ||.--..+..  .....-.+..++|+|.+++|++|+.|+.
T Consensus       166 ~~W~ll~~f~~-dT~DltgieWsPdg~~laV---------wd~~Leykv~--aYe~~lG~k~v~wsP~~qflavGsyD~~  233 (447)
T KOG4497|consen  166 KAWILLKEFKL-DTIDLTGIEWSPDGNWLAV---------WDNVLEYKVY--AYERGLGLKFVEWSPCNQFLAVGSYDQM  233 (447)
T ss_pred             HHHHHHHhcCC-CcccccCceECCCCcEEEE---------ecchhhheee--eeeeccceeEEEeccccceEEeeccchh
Confidence             1111111110 1111222333333333332         2111000000  0011123444444444444444444444


Q ss_pred             EEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEece
Q psy15995        426 ITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQ  505 (683)
Q Consensus       426 i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (683)
                      +++.+--+-+....+.                                                                
T Consensus       234 lrvlnh~tWk~f~efl----------------------------------------------------------------  249 (447)
T KOG4497|consen  234 LRVLNHFTWKPFGEFL----------------------------------------------------------------  249 (447)
T ss_pred             hhhhceeeeeehhhhc----------------------------------------------------------------
Confidence            4443322111111100                                                                


Q ss_pred             EEEEeCCcee-eee------cCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcC-------CCc-cCcc----e-eecCCc
Q psy15995        506 ISIVENGAKV-SSL------PIDYEPSSISLDHEHGLVAVGGADSKVHIYELN-------NKS-LSPK----A-ELDHLG  565 (683)
Q Consensus       506 ~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~-------~~~-~~~~----~-~~~~~~  565 (683)
                       ..-.-..+. ..+      +......++.|.|..         -...+|...       ... ....    . .....-
T Consensus       250 -hl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~---------~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~  319 (447)
T KOG4497|consen  250 -HLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTD---------LEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKC  319 (447)
T ss_pred             -cchhccCchhhhhhhhhcchhhhcccccccCCCc---------cccCccccchhhhhhhhcceeeecccCCCCCCCccc
Confidence             000000000 000      001112333443322         111222211       100 0000    0 011234


Q ss_pred             CeeEEEECCCCCEEEEEeCC--CeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCcee
Q psy15995        566 PVTDCSFSPSNEYLVASDAH--RKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKH  643 (683)
Q Consensus       566 ~v~~~~~s~~~~~l~~~~~d--~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~  643 (683)
                      .+.-++||+|..++++-.+.  +.+.+||++..++.....   ...+|....|.|....|+.+.....+++|...-...+
T Consensus       320 g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi---Qk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V  396 (447)
T KOG4497|consen  320 GAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI---QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVV  396 (447)
T ss_pred             ccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh---hccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEE
Confidence            57789999999999986543  578999999988766555   4578999999999888888877888999998775555


Q ss_pred             eEeecCCCCCCeeEEEEc-cCCeEEEeeCCCc
Q psy15995        644 IIIKNAHPQSQITRLQWL-DNDLLVSVGQDCN  674 (683)
Q Consensus       644 ~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~  674 (683)
                      .....   .-.|..++|. +++.++-.+.|.-
T Consensus       397 ~vP~~---GF~i~~l~W~~~g~~i~l~~kDaf  425 (447)
T KOG4497|consen  397 GVPKK---GFNIQKLQWLQPGEFIVLCGKDAF  425 (447)
T ss_pred             ecCCC---CceeeeEEecCCCcEEEEEcCCce
Confidence            44433   4689999999 9999999998853

>KOG0302|consensus

Probab=99.88  E-value=4.8e-21  Score=165.41  Aligned_cols=223  Identities=19%  Similarity=0.314  Sum_probs=163.9

Q ss_pred             ccCcccceEEEEECCCC--cEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEe
Q psy15995         81 YTEHSCAVNVAKYSPSG--FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIAS  158 (683)
Q Consensus        81 ~~~h~~~v~~~~~s~d~--~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  158 (683)
                      ..+|.+.++.+..++-|  .+.|+=+..|.|.|||+...-.  .+...                                
T Consensus       147 ~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~--~l~~~--------------------------------  192 (440)
T KOG0302|consen  147 SIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLN--ALSEP--------------------------------  192 (440)
T ss_pred             ccccccccceeeecccCCcceeeeecccCcEEEEEchhhhh--hhcCc--------------------------------
Confidence            44688888888888855  4666778899999999865411  11100                                


Q ss_pred             ecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCe-EEEEecCCceEEEEEEccCCCc---eeeeecCCcCeEE
Q psy15995        159 GDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQR-MVVVGEGRERFGHVFMSETGTS---VGEISGQSKPINS  234 (683)
Q Consensus       159 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~  234 (683)
                          +. .+=+ ...+  ..+++..|.+.=+.|+|||-..- |+++  +....+++|...+|.-   ...+.+|...|-.
T Consensus       193 ----~~-~~~~-s~~~--Pl~t~~ghk~EGy~LdWSp~~~g~LlsG--Dc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVED  262 (440)
T KOG0302|consen  193 ----GL-EVKD-SEFR--PLFTFNGHKGEGYGLDWSPIKTGRLLSG--DCVKGIHLWEPSTGSWKVDQRPFTGHTKSVED  262 (440)
T ss_pred             ----cc-cccc-cccC--ceEEecccCccceeeecccccccccccC--ccccceEeeeeccCceeecCccccccccchhh
Confidence                00 0000 1112  23455667788899999993222 3322  2223367777666542   2346779999999


Q ss_pred             EEeecCCCeEEEEeeCCCeEEEEcCCCCce--eeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCC---CeeEEe
Q psy15995        235 CDFKPSRPFRIITGSEDNTIAVFEGPPFKF--KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS---ADLVSE  309 (683)
Q Consensus       235 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~---~~~~~~  309 (683)
                      ++|+|....++++|+.||+|+|||++.+..  ....+.|...|+.+.|+.+-.+||+|+.||+++|||++.   ++++..
T Consensus       263 LqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~  342 (440)
T KOG0302|consen  263 LQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVAT  342 (440)
T ss_pred             hccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCccee
Confidence            999999988999999999999999988732  223378999999999999988999999999999999875   456777


Q ss_pred             ccCCccccCeEEEEEcc-CCCEEEEEECCCcEEEEECCCCc
Q psy15995        310 LGNPAHKGGVYAVAWKP-DGTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       310 ~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      +..  |..+|+++.|+| +...|++++.|.+|.+||+....
T Consensus       343 fk~--Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~  381 (440)
T KOG0302|consen  343 FKY--HKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEA  381 (440)
T ss_pred             EEe--ccCCeeEEEeccccCceEEeccCCCcEEEEEeeccC
Confidence            766  999999999999 55678888999999999997544

>KOG1009|consensus

Probab=99.88  E-value=5.3e-20  Score=160.78  Aligned_cols=327  Identities=15%  Similarity=0.223  Sum_probs=217.1

Q ss_pred             CCCeeEEEEcCCCC-eEEEEecCCceEEEEEEccCCC---------ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeE
Q psy15995        185 GGPIKDIAWSPDNQ-RMVVVGEGRERFGHVFMSETGT---------SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTI  254 (683)
Q Consensus       185 ~~~i~~~~~s~~~~-~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i  254 (683)
                      ..++.++.|.++.. .+++++.+.+  +++|..+.+.         ....+..|...|+++.|+|+|+. +++|+.+|.+
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~--iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gel-LASg~D~g~v   89 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKD--IRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGEL-LASGGDGGEV   89 (434)
T ss_pred             CCceEEEEeccCcccceecccCccc--eeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCe-eeecCCCceE
Confidence            37889999998877 8888887765  5677665432         24457899999999999999995 9999999999


Q ss_pred             EEEcCC--------C--------CceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccC
Q psy15995        255 AVFEGP--------P--------FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGG  318 (683)
Q Consensus       255 ~iw~~~--------~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~  318 (683)
                      .+|...        +        ......+.+|...|..++|+|++.++++++.|..+++||+..|.....+..  |...
T Consensus        90 ~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~d--h~~y  167 (434)
T KOG1009|consen   90 FLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDD--HEHY  167 (434)
T ss_pred             EEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccc--cccc
Confidence            999644        2        334556778999999999999999999999999999999999999999876  9999


Q ss_pred             eEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecC---CcEEEEecCCCCcce
Q psy15995        319 VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS---GFISYLDVNNPSTPI  395 (683)
Q Consensus       319 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---g~i~~~~~~~~~~~~  395 (683)
                      +..++|.|-++++++-+.|...+.+.+...+.+......              ...+-....   ...++|.-++     
T Consensus       168 vqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~--------------~m~~~~~~~~e~~s~rLfhDeT-----  228 (434)
T KOG1009|consen  168 VQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLD--------------IMPAKAFNEREGKSTRLFHDET-----  228 (434)
T ss_pred             cceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeee--------------EeeecccCCCCcceeeeeecCc-----
Confidence            999999999999999999987888777766554433210              000000011   1112221111     


Q ss_pred             eeeeeccccEEEEEEeCCCCEEEEEeC----CCcE-----EEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCe
Q psy15995        396 RVIKGHNKPITALALSPDRGTVFTGSH----DGFI-----TRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDT  466 (683)
Q Consensus       396 ~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i-----~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~  466 (683)
                           -..-...++|+|+|..+++.+.    .+.+     ++++-...+...............+.++.           
T Consensus       229 -----lksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~p-----------  292 (434)
T KOG1009|consen  229 -----LKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSP-----------  292 (434)
T ss_pred             -----hhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeee-----------
Confidence                 1123456789999999987642    1111     22221110000000001111111111100           


Q ss_pred             EEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEE
Q psy15995        467 IKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVH  546 (683)
Q Consensus       467 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~  546 (683)
                       ..+.++..                                             ..... +-.-|-+-.+|+++. ..|+
T Consensus       293 -Vy~elrp~---------------------------------------------~~~~~-~~~lpyrlvfaiAt~-~svy  324 (434)
T KOG1009|consen  293 -VYYELRPL---------------------------------------------SSEKF-LFVLPYRLVFAIATK-NSVY  324 (434)
T ss_pred             -eEEEeccc---------------------------------------------ccccc-ccccccceEEEEeec-ceEE
Confidence             00111000                                             00000 112234445566655 5799


Q ss_pred             EEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccc
Q psy15995        547 IYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELA  599 (683)
Q Consensus       547 i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~  599 (683)
                      +||.++..+......-|-.+++.++|++||..|+..+.||...+..++..++-
T Consensus       325 vydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~elg  377 (434)
T KOG1009|consen  325 VYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWELG  377 (434)
T ss_pred             EeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchhcc
Confidence            99998877765555558999999999999999999999999998888776664

>KOG1034|consensus

Probab=99.88  E-value=1.3e-20  Score=159.86  Aligned_cols=244  Identities=19%  Similarity=0.254  Sum_probs=183.1

Q ss_pred             CCCeeEEEEcCC---CC-eEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC
Q psy15995        185 GGPIKDIAWSPD---NQ-RMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP  260 (683)
Q Consensus       185 ~~~i~~~~~s~~---~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~  260 (683)
                      +.....++|+-|   +. ++++++  ....+++.+..+++....+.+|...|+.+.+.|+.+.++++++.|..|++|+++
T Consensus        89 ~Esfytcsw~yd~~~~~p~la~~G--~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~  166 (385)
T KOG1034|consen   89 DESFYTCSWSYDSNTGNPFLAAGG--YLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ  166 (385)
T ss_pred             CcceEEEEEEecCCCCCeeEEeec--ceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence            344555666543   22 344444  445688999999999999999999999999999998889999999999999999


Q ss_pred             CCceeeec---cccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEecc--------------------------
Q psy15995        261 PFKFKMTK---QEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG--------------------------  311 (683)
Q Consensus       261 ~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--------------------------  311 (683)
                      +..++..+   .+|.+.|.++.|+++|.++++++.|.++++|++...+....+.                          
T Consensus       167 ~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst  246 (385)
T KOG1034|consen  167 TDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFST  246 (385)
T ss_pred             CCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccc
Confidence            99999887   4799999999999999999999999999999987432211110                          


Q ss_pred             CCccccCeEEEEEccCCCEEEEEECCCcEEEEECC-CCceeeEE---------EecC-----cceeceEEEEecCCEEEE
Q psy15995        312 NPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIE-TKSVVSEF---------IMGN-----QVEDQQVSCLWQGDYLLT  376 (683)
Q Consensus       312 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~---------~~~~-----~~~~~~~~~~~~~~~l~~  376 (683)
                      ...|...|-|+.|.  |+++++-+-++.|..|... -++.+...         ....     ..-...+++.+-.+.|+.
T Consensus       247 ~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~  324 (385)
T KOG1034|consen  247 TDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLAL  324 (385)
T ss_pred             cccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhh
Confidence            01256666677776  6788988889999999872 11111111         1111     111234555667889999


Q ss_pred             EecCCcEEEEecCCCCcceeeeee---ccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        377 VSLSGFISYLDVNNPSTPIRVIKG---HNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       377 ~~~~g~i~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                      |...|.+.+||++....+......   ....|...+|+.|+..|+....|+.|.-||..
T Consensus       325 gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  325 GNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             ccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence            999999999999986653322222   24568899999999999999999999999853

>KOG0307|consensus

Probab=99.87  E-value=6.7e-22  Score=195.65  Aligned_cols=294  Identities=23%  Similarity=0.376  Sum_probs=220.8

Q ss_pred             EEEECCCCc-EEEEec----------CCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE---
Q psy15995         90 VAKYSPSGF-YIASGD----------ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY---  155 (683)
Q Consensus        90 ~~~~s~d~~-~las~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~---  155 (683)
                      .++|||++. ++|+|.          .+.++.||.+.....         .......+.+........++|.+.|..   
T Consensus        11 ~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~---------~~dlk~~~s~~s~~rF~kL~W~~~g~~~~G   81 (1049)
T KOG0307|consen   11 TFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDE---------SSDLKPVGSLQSSNRFNKLAWGSYGSHSHG   81 (1049)
T ss_pred             eEEecCCCchhhHHHhhhhccccccccccccceeeecccCc---------cccccccccccccccceeeeecccCCCccc
Confidence            568999886 666654          234455665543321         122233444555577889999998775   


Q ss_pred             -EEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEE
Q psy15995        156 -IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINS  234 (683)
Q Consensus       156 -l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  234 (683)
                       ||.|.+||.|.+||...-.       .             +                    .....+.+...|.+.|..
T Consensus        82 lIaGG~edG~I~ly~p~~~~-------~-------------~--------------------~~~~~la~~~~h~G~V~g  121 (1049)
T KOG0307|consen   82 LIAGGLEDGNIVLYDPASII-------A-------------N--------------------ASEEVLATKSKHTGPVLG  121 (1049)
T ss_pred             eeeccccCCceEEecchhhc-------c-------------C--------------------cchHHHhhhcccCCceee
Confidence             8899999999999975410       0             0                    001223445678889999


Q ss_pred             EEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc--ccccCeEEEEECCCCC-EEEEEcCCCcEEEEeCCCCeeEEecc
Q psy15995        235 CDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ--EHSRFVQAVRYSPSGS-HFASAGFDGKVFLYDGASADLVSELG  311 (683)
Q Consensus       235 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~  311 (683)
                      +.|++....+|++|+.||.|.|||+...+......  .....|.+++|+..-. .|++++.+|.+.|||++..+.+-.+.
T Consensus       122 LDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls  201 (1049)
T KOG0307|consen  122 LDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLS  201 (1049)
T ss_pred             eeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccc
Confidence            99999888789999999999999998766555442  2467899999998654 77888999999999999998887776


Q ss_pred             CCccccCeEEEEEccCC-CEEEEEECCC---cEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEe
Q psy15995        312 NPAHKGGVYAVAWKPDG-TQLLTASGDK---TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLD  387 (683)
Q Consensus       312 ~~~~~~~i~~~~~~~~~-~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~  387 (683)
                      .......+..++|+|+. ..+++++.|.   .|.+||++                                         
T Consensus       202 ~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR-----------------------------------------  240 (1049)
T KOG0307|consen  202 DTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLR-----------------------------------------  240 (1049)
T ss_pred             cCCCccceeeeeeCCCCceeeeeecCCCCCceeEeeccc-----------------------------------------
Confidence            53334457899999965 4566666553   35666655                                         


Q ss_pred             cCCCCcceeeeeeccccEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe---CCeEEEEEc
Q psy15995        388 VNNPSTPIRVIKGHNKPITALALSPDR-GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT---GELLYTCGI  463 (683)
Q Consensus       388 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~  463 (683)
                        ....+++.+.+|...|.++.|++.+ .+|++++.|+.|.+|+.++++.+..+.. ....+..+.|+   ...+++++-
T Consensus       241 --~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~-~~nW~fdv~w~pr~P~~~A~asf  317 (1049)
T KOG0307|consen  241 --FASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA-QGNWCFDVQWCPRNPSVMAAASF  317 (1049)
T ss_pred             --ccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC-CCcceeeeeecCCCcchhhhhee
Confidence              3356677788999999999999966 8889999999999999999998888754 67788889998   568899999


Q ss_pred             CCeEEEEeCCCCc
Q psy15995        464 DDTIKQVDLSSNA  476 (683)
Q Consensus       464 d~~i~~~~~~~~~  476 (683)
                      ||.|.++.+.+..
T Consensus       318 dgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  318 DGKISIYSLQGTD  330 (1049)
T ss_pred             ccceeeeeeecCC
Confidence            9999999988765

>KOG0270|consensus

Probab=99.87  E-value=3e-20  Score=164.21  Aligned_cols=282  Identities=18%  Similarity=0.246  Sum_probs=203.8

Q ss_pred             eeEEEEcCCCCeEEEEecC-CceEEEEEEccCCCceeeeecC-----CcCeEEEEeecC-------CCeEEEEeeCCCeE
Q psy15995        188 IKDIAWSPDNQRMVVVGEG-RERFGHVFMSETGTSVGEISGQ-----SKPINSCDFKPS-------RPFRIITGSEDNTI  254 (683)
Q Consensus       188 i~~~~~s~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~-------~~~~l~~~~~d~~i  254 (683)
                      ...+..-|....++++-.. ......+|..+....  .+--|     .....|+.|...       |+ +++.|+.|..|
T Consensus       128 ~de~~V~psDnlIl~ar~eddvs~LEvYVyn~~e~--nlYvHHD~ilpafPLC~ewld~~~~~~~~gN-yvAiGtmdp~I  204 (463)
T KOG0270|consen  128 KDEEQVKPSDNLILCARNEDDVSYLEVYVYNEEEE--NLYVHHDFILPAFPLCIEWLDHGSKSGGAGN-YVAIGTMDPEI  204 (463)
T ss_pred             cccceeccCCcEEEEeeccCCceEEEEEEEcCCCc--ceeEecceeccCcchhhhhhhcCCCCCCCcc-eEEEeccCcee
Confidence            4456677877777666543 334456666665441  11112     222345555332       34 59999999999


Q ss_pred             EEEcCCCCc---------------------eeeeccccccCeEEEEECCCCC-EEEEEcCCCcEEEEeCCCCeeEEeccC
Q psy15995        255 AVFEGPPFK---------------------FKMTKQEHSRFVQAVRYSPSGS-HFASAGFDGKVFLYDGASADLVSELGN  312 (683)
Q Consensus       255 ~iw~~~~~~---------------------~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~  312 (683)
                      .|||+.-..                     ......+|+..|.+++|+..-+ .||+|+.|.+|++||+.++++...+..
T Consensus       205 eIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~  284 (463)
T KOG0270|consen  205 EIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITH  284 (463)
T ss_pred             EEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhh
Confidence            999954211                     1112246888999999988754 889999999999999999999999975


Q ss_pred             CccccCeEEEEEcc-CCCEEEEEECCCcEEEEECCCCce-eeEEEecCcceeceEEEEe-cCCEEEEEecCCcEEEEecC
Q psy15995        313 PAHKGGVYAVAWKP-DGTQLLTASGDKTCKLWDIETKSV-VSEFIMGNQVEDQQVSCLW-QGDYLLTVSLSGFISYLDVN  389 (683)
Q Consensus       313 ~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~~~~  389 (683)
                        |.+.|.++.|+| ....|++|+.|+++.+.|.+.... -..+..  ......+.+.+ ....+++++.+|.++-+|++
T Consensus       285 --~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~--~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R  360 (463)
T KOG0270|consen  285 --HGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKF--DGEVEKVAWDPHSENSFFVSTDDGTVYYFDIR  360 (463)
T ss_pred             --cCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEe--ccceEEEEecCCCceeEEEecCCceEEeeecC
Confidence              999999999999 577899999999999999985222 122222  22334455555 45678888999999999999


Q ss_pred             CCCcceeeeeeccccEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCCcceeccCC-CCcceeEEEEe---CCeEEEEEcC
Q psy15995        390 NPSTPIRVIKGHNKPITALALSPDR-GTVFTGSHDGFITRWNAKTGENDRVQGAG-HGNQINGMKAT---GELLYTCGID  464 (683)
Q Consensus       390 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~~~-~~~~v~~~~~~---~~~l~~~~~d  464 (683)
                      ...+++.+++.|.++|.++++++.- .++++++.|+.|++|++............ .-+...|++++   .-.++.|+..
T Consensus       361 ~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k  440 (463)
T KOG0270|consen  361 NPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEK  440 (463)
T ss_pred             CCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCCcceEEEecCcc
Confidence            9999999999999999999998854 57889999999999998766553332211 12234455555   5678888889


Q ss_pred             CeEEEEeCCCCc
Q psy15995        465 DTIKQVDLSSNA  476 (683)
Q Consensus       465 ~~i~~~~~~~~~  476 (683)
                      +.+++||+.+..
T Consensus       441 ~~~~vwd~~~~~  452 (463)
T KOG0270|consen  441 AVLRVWDIFTNS  452 (463)
T ss_pred             ceEEEeecccCh
Confidence            999999998764

>KOG2919|consensus

Probab=99.87  E-value=8.1e-20  Score=154.64  Aligned_cols=278  Identities=18%  Similarity=0.165  Sum_probs=204.0

Q ss_pred             CCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCC-------ccc-----cccc-CcccceEEEEEC-------CCCcEEEEe
Q psy15995         45 GQPIVLGGDPKGKNFLYT-NGNSVIIRNIENP-------AIS-----DIYT-EHSCAVNVAKYS-------PSGFYIASG  103 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~-------~~~-----~~~~-~h~~~v~~~~~s-------~d~~~las~  103 (683)
                      +..-...|||||.-|.+. .++.+.+|++...       ...     ..++ .-...|...+|-       |+..++|+.
T Consensus        50 nf~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~s  129 (406)
T KOG2919|consen   50 NFLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVS  129 (406)
T ss_pred             hhhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeec
Confidence            344456799999987776 6889999998531       110     0111 123445555554       677899999


Q ss_pred             cCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEec-cccceeeecccc
Q psy15995        104 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDT-VNKEHILKNEFH  182 (683)
Q Consensus       104 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~-~~~~~~~~~~~~  182 (683)
                      +.+.-|.+||.-+|+....+..-.+...         .....+++|+|||.+|.+|. .+.|+++|+ ..|+....+...
T Consensus       130 sr~~PIh~wdaftG~lraSy~~ydh~de---------~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~  199 (406)
T KOG2919|consen  130 SRDQPIHLWDAFTGKLRASYRAYDHQDE---------YTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTV  199 (406)
T ss_pred             cccCceeeeeccccccccchhhhhhHHh---------hhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhh
Confidence            9999999999999988776654432211         24567899999999998876 579999999 444332222211


Q ss_pred             -----ccCCCeeEEEEcCCCC-eEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeC-CCeEE
Q psy15995        183 -----PIGGPIKDIAWSPDNQ-RMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSE-DNTIA  255 (683)
Q Consensus       183 -----~~~~~i~~~~~s~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~i~  255 (683)
                           +..+-+.+++|+|-.. .+++.+....  .-++.+..+.++..+.+|.+.|+.++|.++|+. |++|.. |..|.
T Consensus       200 ~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~--~giy~~~~~~pl~llggh~gGvThL~~~edGn~-lfsGaRk~dkIl  276 (406)
T KOG2919|consen  200 TKGKFGQKGIISCFAFSPMDSKTLAVGSYGQR--VGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNK-LFSGARKDDKIL  276 (406)
T ss_pred             hcccccccceeeeeeccCCCCcceeeecccce--eeeEecCCCCceeeecccCCCeeeEEeccCcCe-ecccccCCCeEE
Confidence                 2246789999999665 6666665543  678899999999999999999999999999995 776654 78899


Q ss_pred             EEcCCCCc-eeeecccccc---CeEEEEECCCCCEEEEEcCCCcEEEEeCCC-CeeEEeccCCccccCeEEEEEccCCCE
Q psy15995        256 VFEGPPFK-FKMTKQEHSR---FVQAVRYSPSGSHFASAGFDGKVFLYDGAS-ADLVSELGNPAHKGGVYAVAWKPDGTQ  330 (683)
Q Consensus       256 iw~~~~~~-~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~  330 (683)
                      .||++..+ .+..+..|..   .=.-....|++++|++|+.||.|++||+++ +..+..+..  +...+..++++|--..
T Consensus       277 ~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~--~sd~vNgvslnP~mpi  354 (406)
T KOG2919|consen  277 CWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGN--YSDTVNGVSLNPIMPI  354 (406)
T ss_pred             EEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccccc--ccccccceecCcccce
Confidence            99987644 4455555544   222355678999999999999999999988 666666654  8889999999998778


Q ss_pred             EEEEECC
Q psy15995        331 LLTASGD  337 (683)
Q Consensus       331 l~~~~~d  337 (683)
                      +++++..
T Consensus       355 latssGq  361 (406)
T KOG2919|consen  355 LATSSGQ  361 (406)
T ss_pred             eeeccCc
Confidence            8887654

>KOG2110|consensus

Probab=99.87  E-value=5.4e-19  Score=152.77  Aligned_cols=323  Identities=17%  Similarity=0.176  Sum_probs=219.4

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCc
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISG  163 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~  163 (683)
                      ....+..+.|..|...|..|+.|| .++++.+.-..........              ..|..+.|+..=--|+...+.+
T Consensus         4 ~~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~--------------~~IvEmLFSSSLvaiV~~~qpr   68 (391)
T KOG2110|consen    4 KKPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEG--------------VSIVEMLFSSSLVAIVSIKQPR   68 (391)
T ss_pred             CCcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCC--------------eEEEEeecccceeEEEecCCCc
Confidence            345677888999999999999997 7888877654422222111              4566777776655555555556


Q ss_pred             cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeec---CCcCeEEEEeecC
Q psy15995        164 KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISG---QSKPINSCDFKPS  240 (683)
Q Consensus       164 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~  240 (683)
                      .+++.+...+..++...++   .+|.++.++.+  +|+++-.+.   +++++.+..+.++++..   +...+.++.+++.
T Consensus        69 ~Lkv~~~Kk~~~ICe~~fp---t~IL~VrmNr~--RLvV~Lee~---IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~  140 (391)
T KOG2110|consen   69 KLKVVHFKKKTTICEIFFP---TSILAVRMNRK--RLVVCLEES---IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNA  140 (391)
T ss_pred             eEEEEEcccCceEEEEecC---CceEEEEEccc--eEEEEEccc---EEEEecccceeehhhhccCCCccceEeeccCCC
Confidence            7999999998888888776   78999999764  455554443   89999999998888765   4455666666666


Q ss_pred             CCeEEEEee-CCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCc-EEEEeCCCCeeEEeccCCccccC
Q psy15995        241 RPFRIITGS-EDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGK-VFLYDGASADLVSELGNPAHKGG  318 (683)
Q Consensus       241 ~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iw~~~~~~~~~~~~~~~~~~~  318 (683)
                      +.++.+=++ ..|.|.+||..+.+....+..|.+.+.+++|+++|.+||+++..|+ ||++.+.+|+.+.+++.-.....
T Consensus       141 n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~  220 (391)
T KOG2110|consen  141 NCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVS  220 (391)
T ss_pred             CceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeE
Confidence            666333333 3689999999999999999999999999999999999999999996 78999999999999876445668


Q ss_pred             eEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeee
Q psy15995        319 VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI  398 (683)
Q Consensus       319 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~  398 (683)
                      |.+++|+|++++|.+.+..++|+++.++..... ...  .+.. ..-...+-.+.+..--..+.-.+|+........+.-
T Consensus       221 IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~~~-~~~--~p~~-~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~  296 (391)
T KOG2110|consen  221 IYSLSFSPDSQFLAASSNTETVHIFKLEKVSNN-PPE--SPTA-GTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLP  296 (391)
T ss_pred             EEEEEECCCCCeEEEecCCCeEEEEEecccccC-CCC--CCCC-CCcccchhhhhhhhhcchhhhhhhhhccceeEEEcc
Confidence            999999999999999999999999998764411 000  0000 000000000000000001111223333211111111


Q ss_pred             eeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCC
Q psy15995        399 KGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       399 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~  433 (683)
                      ......+..+.-.+...++..++.||.+..|.+..
T Consensus       297 ~s~~~~~~~l~~~~~~~~v~vas~dG~~y~y~l~~  331 (391)
T KOG2110|consen  297 ESGRKNICSLSSIQKIPRVLVASYDGHLYSYRLPP  331 (391)
T ss_pred             CCCccceEEeeccCCCCEEEEEEcCCeEEEEEcCC
Confidence            11112344444445778999999999999998764

>KOG0322|consensus

Probab=99.87  E-value=8.6e-21  Score=155.73  Aligned_cols=289  Identities=18%  Similarity=0.248  Sum_probs=203.7

Q ss_pred             cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE
Q psy15995         76 AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY  155 (683)
Q Consensus        76 ~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  155 (683)
                      .+...|++|.+.|+++.|-.+++ |.+|..-|.|++|++++.+.+..+..+.             ...|+.+...|+ ..
T Consensus         5 dP~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g-------------~~~it~lq~~p~-d~   69 (323)
T KOG0322|consen    5 DPFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFG-------------RLFITNLQSIPN-DS   69 (323)
T ss_pred             CCeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhc-------------cceeeceeecCC-cc
Confidence            34556779999999999999885 8899999999999999998877776321             156777777777 57


Q ss_pred             EEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcC-----CCC----eEEEEecCCceEEEEEEccCCCc--eee
Q psy15995        156 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSP-----DNQ----RMVVVGEGRERFGHVFMSETGTS--VGE  224 (683)
Q Consensus       156 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-----~~~----~l~~~~~~~~~~~~~~~~~~~~~--~~~  224 (683)
                      |.+-+.|..+.+|++..+..+....     -.++++-|.+     +++    .++.-+.+.+.   +...+-+..  +..
T Consensus        70 l~tqgRd~~L~lw~ia~s~~i~i~S-----i~~nslgFCrfSl~~~~k~~eqll~yp~rgsde---~h~~D~g~~tqv~i  141 (323)
T KOG0322|consen   70 LDTQGRDPLLILWTIAYSAFISIHS-----IVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDE---THKQDGGDTTQVQI  141 (323)
T ss_pred             hhhcCCCceEEEEEccCcceEEEee-----eeccccccccceeccCCCcchhheecCCcccch---hhhhccCccceeEc
Confidence            8889999999999998765433222     2233333332     221    12221211111   111111221  111


Q ss_pred             e----ecCCcCeEEEEee--cCCCeEEEEeeCCCeEEEEcCCCC----------ceeeeccccccCeEEEEECCCCCEEE
Q psy15995        225 I----SGQSKPINSCDFK--PSRPFRIITGSEDNTIAVFEGPPF----------KFKMTKQEHSRFVQAVRYSPSGSHFA  288 (683)
Q Consensus       225 ~----~~~~~~v~~~~~~--~~~~~~l~~~~~d~~i~iw~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~  288 (683)
                      .    .+..+.+.+..+.  .....++++|.++|.+.+||+.++          +.......|..+|.++.|.+.-..=+
T Consensus       142 ~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGi  221 (323)
T KOG0322|consen  142 ADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGI  221 (323)
T ss_pred             cCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCc
Confidence            1    1234556666532  234456888999999999999887          44445567999999999998776778


Q ss_pred             EEcCCCcEEEEeCCCC--eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEE
Q psy15995        289 SAGFDGKVFLYDGASA--DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVS  366 (683)
Q Consensus       289 ~~~~dg~i~iw~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  366 (683)
                      +|+.+..+..|+++..  .+.......-..-.|..+..-||++.+++++.|+.+++|+.++..++               
T Consensus       222 sgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pL---------------  286 (323)
T KOG0322|consen  222 SGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPL---------------  286 (323)
T ss_pred             CCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCch---------------
Confidence            8888888999987643  22111111114456888999999999999999999999999887654               


Q ss_pred             EEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcC
Q psy15995        367 CLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNA  431 (683)
Q Consensus       367 ~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~  431 (683)
                                                   ..++-|...|.+++|+|+.+.+|.++.|++|.+|++
T Consensus       287 -----------------------------AVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  287 -----------------------------AVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             -----------------------------hhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence                                         345669999999999999999999999999999986

>KOG0322|consensus

Probab=99.86  E-value=1e-20  Score=155.34  Aligned_cols=285  Identities=16%  Similarity=0.240  Sum_probs=197.6

Q ss_pred             cceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe-CCeEEEEEcCCeEEEEe
Q psy15995        393 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT-GELLYTCGIDDTIKQVD  471 (683)
Q Consensus       393 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~~~  471 (683)
                      .+...+++|.+.++++.|..+++ |.+|..-|.|.+|++++..........+...|+.+... ++.+.+-+.|..+.+|+
T Consensus         5 dP~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d~l~tqgRd~~L~lw~   83 (323)
T KOG0322|consen    5 DPFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPNDSLDTQGRDPLLILWT   83 (323)
T ss_pred             CCeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCCcchhhcCCCceEEEEE
Confidence            34566778999999999988765 89999999999999999988877766788888888877 68999999999999999


Q ss_pred             CCCCcccCCceecCC----CCceeeecCC---eEEEEEece---EEEEeCCceeeee-------cCCCCCcEEEEcc-C-
Q psy15995        472 LSSNAYSGPEVKLGS----QPRGLDIDEN---TLVTVTVKQ---ISIVENGAKVSSL-------PIDYEPSSISLDH-E-  532 (683)
Q Consensus       472 ~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~-  532 (683)
                      +....+.........    -...+...+.   .+.....+.   ....+.+.+....       +....+.+..+.. + 
T Consensus        84 ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~  163 (323)
T KOG0322|consen   84 IAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACG  163 (323)
T ss_pred             ccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeecccccc
Confidence            987443221110000    0000000000   000000000   0011111111110       1112233333211 1 


Q ss_pred             -CCEEEEEcCCCcEEEEEcCCCccCcc---------eeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCC--Ccccc
Q psy15995        533 -HGLVAVGGADSKVHIYELNNKSLSPK---------AELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPD--FELAH  600 (683)
Q Consensus       533 -~~~l~~~~~dg~i~i~d~~~~~~~~~---------~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~--~~~~~  600 (683)
                       .-++++|-++|.+.+||+.++.....         ....|..+|.++.|.+.-..=++|+.+..+..|++..  +.+..
T Consensus       164 s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~  243 (323)
T KOG0322|consen  164 STFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQI  243 (323)
T ss_pred             ceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccc
Confidence             23577888999999999998732211         1124889999999998766777888888999998863  44443


Q ss_pred             ccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEccC-CeEEEeeCCCcEEEEe
Q psy15995        601 NKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDN-DLLVSVGQDCNTKIWE  679 (683)
Q Consensus       601 ~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~l~s~~~d~~v~vw~  679 (683)
                      ..+..-..-.|..+..-||++.+||++.|+.||||+.++..++..++.  |++.|++++|+++ ++++++|.|++|.+|+
T Consensus       244 ~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLky--Hsagvn~vAfspd~~lmAaaskD~rISLWk  321 (323)
T KOG0322|consen  244 RKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKY--HSAGVNAVAFSPDCELMAAASKDARISLWK  321 (323)
T ss_pred             cceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhh--hhcceeEEEeCCCCchhhhccCCceEEeee
Confidence            333332344588899999999999999999999999999999999987  8999999999954 8999999999999998


Q ss_pred             e
Q psy15995        680 I  680 (683)
Q Consensus       680 ~  680 (683)
                      +
T Consensus       322 L  322 (323)
T KOG0322|consen  322 L  322 (323)
T ss_pred             c
Confidence            6

>KOG1188|consensus

Probab=99.86  E-value=3.7e-20  Score=158.05  Aligned_cols=282  Identities=15%  Similarity=0.228  Sum_probs=200.1

Q ss_pred             cEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeec--cceEEEeecCCccEEEEeccccce
Q psy15995         98 FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS--IGFYIASGDISGKVRIWDTVNKEH  175 (683)
Q Consensus        98 ~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~d~~i~iwd~~~~~~  175 (683)
                      ..+|++-..|.|+++|..++..+..++.++              ..++.+.|..  ....+.+++.||+|++||+.....
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~--------------~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e  106 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPP--------------ATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAE  106 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCC--------------CcccceEEecCCCCCeeEEeccCCeEEEEEeecchh
Confidence            568888889999999999999999998887              6677788877  466899999999999999998776


Q ss_pred             eeeccccccC-CCeeEEEEcCCCCeEEEEecC--CceEEEEEEccCCCc-eee-eecCCcCeEEEEeecCCCeEEEEeeC
Q psy15995        176 ILKNEFHPIG-GPIKDIAWSPDNQRMVVVGEG--RERFGHVFMSETGTS-VGE-ISGQSKPINSCDFKPSRPFRIITGSE  250 (683)
Q Consensus       176 ~~~~~~~~~~-~~i~~~~~s~~~~~l~~~~~~--~~~~~~~~~~~~~~~-~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~  250 (683)
                      ...+....++ .+..+++....++.++++...  .+..+.+|++...+. ++. ...|.+.|+++.|+|..+.+|++|+.
T Consensus       107 ~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSv  186 (376)
T KOG1188|consen  107 SARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSV  186 (376)
T ss_pred             hhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecc
Confidence            6666666555 566777777778888777643  445677888887655 555 45799999999999999999999999


Q ss_pred             CCeEEEEcCCCCce---eeeccccccCeEEEEECCCC-CEEEEEcCCCcEEEEeCCCCeeEEeccCCccc----------
Q psy15995        251 DNTIAVFEGPPFKF---KMTKQEHSRFVQAVRYSPSG-SHFASAGFDGKVFLYDGASADLVSELGNPAHK----------  316 (683)
Q Consensus       251 d~~i~iw~~~~~~~---~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~----------  316 (683)
                      ||.|.+||+.....   +...-.|...|.++.|..++ +.+.+-+......+|+++.+.....+..+...          
T Consensus       187 DGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~  266 (376)
T KOG1188|consen  187 DGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNC  266 (376)
T ss_pred             cceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhh
Confidence            99999999765432   22223477789999999887 35888888999999999998866555432110          


Q ss_pred             cCeEEEEEcc-CCCEEEEEEC-CCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcc
Q psy15995        317 GGVYAVAWKP-DGTQLLTASG-DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTP  394 (683)
Q Consensus       317 ~~i~~~~~~~-~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~  394 (683)
                      ..+... .+| +...++.++. .+...++-+......                                      +....
T Consensus       267 dY~I~~-~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~--------------------------------------~~~~~  307 (376)
T KOG1188|consen  267 DYVINE-HSPGDKDTCALAGTDSNKGTIFPLVDTSSG--------------------------------------SLLTE  307 (376)
T ss_pred             hheeec-ccCCCcceEEEeccccCceeEEEeeecccc--------------------------------------cccCc
Confidence            001111 112 2233333322 233333322210000                                      00222


Q ss_pred             eeeeee-ccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        395 IRVIKG-HNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       395 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                      ...+.+ |..-|+++.|...+..+++|++||.+.+|...
T Consensus       308 ~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~  346 (376)
T KOG1188|consen  308 PAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVE  346 (376)
T ss_pred             cccccCCcHHHHHHHhhhcccceeeccCCCceEEEEecC
Confidence            333444 77788899998889999999999999999863

>KOG0303|consensus

Probab=99.84  E-value=3.7e-19  Score=154.84  Aligned_cols=238  Identities=24%  Similarity=0.311  Sum_probs=188.2

Q ss_pred             CCCeEEEEecC--CceEEEEEEccCCCc---eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC-------c
Q psy15995        196 DNQRMVVVGEG--RERFGHVFMSETGTS---VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF-------K  263 (683)
Q Consensus       196 ~~~~l~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-------~  263 (683)
                      +.+++++....  +..+..+-..++|+.   .....+|.++|..++|+|.+...+++|++|.+|.||.+...       +
T Consensus        43 NPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~lte  122 (472)
T KOG0303|consen   43 NPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTE  122 (472)
T ss_pred             CCceEEEEEecCCCcceeecccccccccCCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCccc
Confidence            34566655432  223333334445543   44568999999999999998889999999999999997654       3


Q ss_pred             eeeeccccccCeEEEEECCCC-CEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEE
Q psy15995        264 FKMTKQEHSRFVQAVRYSPSG-SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKL  342 (683)
Q Consensus       264 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  342 (683)
                      .+..+.+|...|--++|+|.. +.|++++.|..|.+|++.+++.+..+.   |...|.++.|+.||.+|++.+.|..|++
T Consensus       123 pvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~---hpd~i~S~sfn~dGs~l~TtckDKkvRv  199 (472)
T KOG0303|consen  123 PVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD---HPDMVYSMSFNRDGSLLCTTCKDKKVRV  199 (472)
T ss_pred             ceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC---CCCeEEEEEeccCCceeeeecccceeEE
Confidence            456778999999999999975 478899999999999999999988876   9999999999999999999999999999


Q ss_pred             EECCCCceeeEEEecCcceeceEEEEecCCEEEEEe---cCCcEEEEecCCCCcceeeeee-ccccEEEEEEeCCCCEEE
Q psy15995        343 WDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVS---LSGFISYLDVNNPSTPIRVIKG-HNKPITALALSPDRGTVF  418 (683)
Q Consensus       343 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~g~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~  418 (683)
                      ||.++++.+.+-............+..++..+.+|.   .+..+-+||..+-.+++....- ....|.---|.+|.+.++
T Consensus       200 ~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivY  279 (472)
T KOG0303|consen  200 IDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVY  279 (472)
T ss_pred             EcCCCCcEeeecccccCCCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEE
Confidence            999999999988666667777778888888555553   3568999999887776543322 344566666888888777


Q ss_pred             -EEeCCCcEEEEcCCCCCc
Q psy15995        419 -TGSHDGFITRWNAKTGEN  436 (683)
Q Consensus       419 -~~~~dg~i~~w~~~~~~~  436 (683)
                       +|-.|+.|+.|.+....+
T Consensus       280 l~GKGD~~IRYyEit~d~P  298 (472)
T KOG0303|consen  280 LCGKGDSSIRYFEITNEPP  298 (472)
T ss_pred             EEecCCcceEEEEecCCCc
Confidence             555699999999987764

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.84  E-value=1.6e-17  Score=158.52  Aligned_cols=276  Identities=12%  Similarity=0.162  Sum_probs=178.7

Q ss_pred             EEEcCCCcEEEEeCCC-Ce--eEEeccCCccccCeEEEEEccCCCEEEEEE-CCCcEEEEECCC-CceeeEEEecCccee
Q psy15995        288 ASAGFDGKVFLYDGAS-AD--LVSELGNPAHKGGVYAVAWKPDGTQLLTAS-GDKTCKLWDIET-KSVVSEFIMGNQVED  362 (683)
Q Consensus       288 ~~~~~dg~i~iw~~~~-~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~~~~~~~~~~~~~  362 (683)
                      ++...++.|.+|++.+ ++  .+..+.   ..+....++++|++++|++++ .++.|.+|++.. ++....-........
T Consensus         6 ~~~~~~~~I~~~~~~~~g~l~~~~~~~---~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p   82 (330)
T PRK11028          6 IASPESQQIHVWNLNHEGALTLLQVVD---VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSP   82 (330)
T ss_pred             EEcCCCCCEEEEEECCCCceeeeeEEe---cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCc
Confidence            3446689999999964 33  334443   445677899999999987765 478899999973 332211111222345


Q ss_pred             ceEEEEecCCEEEEEec-CCcEEEEecCCCCcc---eeeeeeccccEEEEEEeCCCCEEEEEe-CCCcEEEEcCCCCCcc
Q psy15995        363 QQVSCLWQGDYLLTVSL-SGFISYLDVNNPSTP---IRVIKGHNKPITALALSPDRGTVFTGS-HDGFITRWNAKTGEND  437 (683)
Q Consensus       363 ~~~~~~~~~~~l~~~~~-~g~i~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~w~~~~~~~~  437 (683)
                      ..+.+++++++++++.. ++.+.+|++......   ...+. +.....+++++|+++++++++ .++.|.+||+.+....
T Consensus        83 ~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l  161 (330)
T PRK11028         83 THISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHL  161 (330)
T ss_pred             eEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcc
Confidence            67888899998888764 789999999743322   22222 234467788999999886554 5689999998753321


Q ss_pred             eeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeee
Q psy15995        438 RVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSS  517 (683)
Q Consensus       438 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (683)
                      .... ..                                                                      ...
T Consensus       162 ~~~~-~~----------------------------------------------------------------------~~~  170 (330)
T PRK11028        162 VAQE-PA----------------------------------------------------------------------EVT  170 (330)
T ss_pred             cccC-CC----------------------------------------------------------------------cee
Confidence            1100 00                                                                      000


Q ss_pred             ecCCCCCcEEEEccCCCEEEEEcC-CCcEEEEEcCC--CccCcceeec-------CCcCeeEEEECCCCCEEEEEeC-CC
Q psy15995        518 LPIDYEPSSISLDHEHGLVAVGGA-DSKVHIYELNN--KSLSPKAELD-------HLGPVTDCSFSPSNEYLVASDA-HR  586 (683)
Q Consensus       518 ~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~--~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~~~~~-d~  586 (683)
                      .+....+..++++|+++++++++. ++.|.+|+++.  +.........       +......+.++|++++|+++.. ++
T Consensus       171 ~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~  250 (330)
T PRK11028        171 TVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTAS  250 (330)
T ss_pred             cCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCC
Confidence            011224577899999999988876 89999999974  2321111111       1122346899999999999864 78


Q ss_pred             eEEEEECCCCcccc--ccceeeecccEEEEEecCCCCeEEEeec-CCcEEEEeCCC
Q psy15995        587 KVVLYRVPDFELAH--NKEWGFHSAKVNCVAWSPDSALVASGSL-DTTIIIWSLAS  639 (683)
Q Consensus       587 ~i~i~~~~~~~~~~--~~~~~~h~~~v~~~~~s~d~~~l~~~~~-d~~v~iw~~~~  639 (683)
                      .|.+|++.......  ..... -......++++|||++|+++.. +++|.+|+++.
T Consensus       251 ~I~v~~i~~~~~~~~~~~~~~-~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~  305 (330)
T PRK11028        251 LISVFSVSEDGSVLSFEGHQP-TETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG  305 (330)
T ss_pred             eEEEEEEeCCCCeEEEeEEEe-ccccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence            99999996432111  11110 1124568899999999998776 88999998853

>KOG1007|consensus

Probab=99.84  E-value=1.6e-18  Score=144.46  Aligned_cols=271  Identities=18%  Similarity=0.255  Sum_probs=195.2

Q ss_pred             CCeEEEEeCCC--Ccc-cccccCcccceEEEEECC-CCcEEEEecCC-------CCEEEEeCCCcccccccccccCCCCc
Q psy15995         64 GNSVIIRNIEN--PAI-SDIYTEHSCAVNVAKYSP-SGFYIASGDIS-------GKVRIWDTVNKEHILKNEFHPIGGPI  132 (683)
Q Consensus        64 ~~~i~v~~~~~--~~~-~~~~~~h~~~v~~~~~s~-d~~~las~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~  132 (683)
                      ++.|.+..++.  +++ -+.|..|.+.|..++-+| |.+.|+|+..+       -.+.||.+......      ....+.
T Consensus        39 dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~------S~~~tl  112 (370)
T KOG1007|consen   39 DNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQ------SNSSTL  112 (370)
T ss_pred             cceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCc------cccchh
Confidence            46666666544  333 345777899999999999 66777877542       13889998765321      001111


Q ss_pred             ccceeee--eecceeeeEeeccceEEEeecCCccEEEEecccccee-eecc---ccccCCCeeEEEEcC--CCCeEEEEe
Q psy15995        133 KDIGTLL--SLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHI-LKNE---FHPIGGPIKDIAWSP--DNQRMVVVG  204 (683)
Q Consensus       133 ~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~-~~~~---~~~~~~~i~~~~~s~--~~~~l~~~~  204 (683)
                      ..+..+.  ....+.++.|.|++..+++-. |..|.+|++..+..+ ....   -..+....++-+|+|  |++.+++.+
T Consensus       113 E~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~  191 (370)
T KOG1007|consen  113 ECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS  191 (370)
T ss_pred             hHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeC
Confidence            1122211  225789999999999999877 889999999987652 1111   112345677888998  788888887


Q ss_pred             cCCceEEEEEEccCCCceeee-ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC-ceeeeccccccCeEEEEECC
Q psy15995        205 EGRERFGHVFMSETGTSVGEI-SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF-KFKMTKQEHSRFVQAVRYSP  282 (683)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~  282 (683)
                      +..   ...|+..+.+....+ ..|...|..+.|+|+.++.|++++.||.|++||.+.- ..++.+.+|...|.++.|+|
T Consensus       192 d~t---l~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~  268 (370)
T KOG1007|consen  192 DST---LQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNP  268 (370)
T ss_pred             CCc---EEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecC
Confidence            764   567777776655554 4688999999999999999999999999999997754 46788899999999999999


Q ss_pred             CC-CEEEEEcCCCcEEEEeCCCCe-----------------------------eEEeccCCccccCeEEEEEccCC-CEE
Q psy15995        283 SG-SHFASAGFDGKVFLYDGASAD-----------------------------LVSELGNPAHKGGVYAVAWKPDG-TQL  331 (683)
Q Consensus       283 ~~-~~l~~~~~dg~i~iw~~~~~~-----------------------------~~~~~~~~~~~~~i~~~~~~~~~-~~l  331 (683)
                      .- +++++++.|..|.+|....-.                             .+.++.  .|...|++++|+.-. =.|
T Consensus       269 ~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tyd--ehEDSVY~~aWSsadPWiF  346 (370)
T KOG1007|consen  269 EHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYD--EHEDSVYALAWSSADPWIF  346 (370)
T ss_pred             ccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhccccccccccccc--ccccceEEEeeccCCCeeE
Confidence            65 478899999999999542110                             112232  389999999998744 467


Q ss_pred             EEEECCCcEEEEECC
Q psy15995        332 LTASGDKTCKLWDIE  346 (683)
Q Consensus       332 ~~~~~dg~i~iwd~~  346 (683)
                      ++-+.||.+.|=.+.
T Consensus       347 ASLSYDGRviIs~V~  361 (370)
T KOG1007|consen  347 ASLSYDGRVIISSVP  361 (370)
T ss_pred             EEeccCceEEeecCC
Confidence            778999998876554

>KOG1517|consensus

Probab=99.84  E-value=1.7e-18  Score=169.68  Aligned_cols=294  Identities=19%  Similarity=0.320  Sum_probs=218.1

Q ss_pred             cCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecccc---ccCeEEEEECCC--CCEEEEEcCCCcEEEEeCCC-
Q psy15995        230 KPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH---SRFVQAVRYSPS--GSHFASAGFDGKVFLYDGAS-  303 (683)
Q Consensus       230 ~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~---~~~v~~~~~~~~--~~~l~~~~~dg~i~iw~~~~-  303 (683)
                      .+-..+.|+|-.+ .++++...-.|++||.+.++....+..+   ...|+.+.+-.+  ..++++++.||.|+||+--. 
T Consensus      1065 ~~pk~~~~hpf~p-~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~ 1143 (1387)
T KOG1517|consen 1065 QPPKTLKFHPFEP-QIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYAD 1143 (1387)
T ss_pred             CCCceeeecCCCc-eeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccc
Confidence            3456788888888 4888888889999999998887776543   456888888664  44899999999999996322 


Q ss_pred             ----CeeEEeccC-----CccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEe-cCCE
Q psy15995        304 ----ADLVSELGN-----PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW-QGDY  373 (683)
Q Consensus       304 ----~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  373 (683)
                          .+.+.....     ++..+.-.-+.|.....+|++++.-..|+|||......+..+..+.......++... .++.
T Consensus      1144 ~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~ 1223 (1387)
T KOG1517|consen 1144 KWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNI 1223 (1387)
T ss_pred             ccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCce
Confidence                222222211     111112244678777777888777889999999999988888777666666665554 5799


Q ss_pred             EEEEecCCcEEEEecCCCCc--ceeeeeecccc--EEEEEEeCCCC-EEEEEeCCCcEEEEcCCCCCcceeccCCCCcce
Q psy15995        374 LLTVSLSGFISYLDVNNPST--PIRVIKGHNKP--ITALALSPDRG-TVFTGSHDGFITRWNAKTGENDRVQGAGHGNQI  448 (683)
Q Consensus       374 l~~~~~~g~i~~~~~~~~~~--~~~~~~~~~~~--v~~~~~~~~~~-~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v  448 (683)
                      +++|..||.+++||.+....  .+...+.|...  |..+.+.+.|- .|++|+.||.|++||++.........       
T Consensus      1224 i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~------- 1296 (1387)
T KOG1517|consen 1224 IAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLT------- 1296 (1387)
T ss_pred             EEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccce-------
Confidence            99999999999999986544  77788889888  99999998764 49999999999999998752221110       


Q ss_pred             eEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEE
Q psy15995        449 NGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSIS  528 (683)
Q Consensus       449 ~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  528 (683)
                                       .+.-|+.                                                ....+++.
T Consensus      1297 -----------------iv~~~~y------------------------------------------------Gs~lTal~ 1311 (1387)
T KOG1517|consen 1297 -----------------IVAHWEY------------------------------------------------GSALTALT 1311 (1387)
T ss_pred             -----------------eeecccc------------------------------------------------Cccceeee
Confidence                             0011111                                                11357888


Q ss_pred             EccCCCEEEEEcCCCcEEEEEcCCCccCccee-----ecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q psy15995        529 LDHEHGLVAVGGADSKVHIYELNNKSLSPKAE-----LDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFE  597 (683)
Q Consensus       529 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~  597 (683)
                      ++++..++|+|+. +.|.||++.+.++.....     ....+.+.+++|+|-.-+||+|+.|.+|.||.....+
T Consensus      1312 VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1312 VHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred             eccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCcC
Confidence            9999999999988 899999998766543222     1245678999999999999999999999999877654

>KOG0642|consensus

Probab=99.84  E-value=1.3e-19  Score=165.27  Aligned_cols=273  Identities=16%  Similarity=0.211  Sum_probs=193.8

Q ss_pred             eeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCC--------CeeEEeccCCccccCeEEEEEccCCCEEEEEEC
Q psy15995        265 KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS--------ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG  336 (683)
Q Consensus       265 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  336 (683)
                      ..++..|...|+.++|.|....|++++.||.+.+|+++.        -+.+.++.  +|.++|.|+++.++++.+++|+.
T Consensus       287 k~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfr--aH~gPVl~v~v~~n~~~~ysgg~  364 (577)
T KOG0642|consen  287 KFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFR--AHEGPVLCVVVPSNGEHCYSGGI  364 (577)
T ss_pred             eeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEe--cccCceEEEEecCCceEEEeecc
Confidence            346677899999999999999999999999999999832        13455554  49999999999999999999999


Q ss_pred             CCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCE
Q psy15995        337 DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGT  416 (683)
Q Consensus       337 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  416 (683)
                      ||+|+.|++......                                  +|...+......+.||.+.++.+++++....
T Consensus       365 Dg~I~~w~~p~n~dp----------------------------------~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~  410 (577)
T KOG0642|consen  365 DGTIRCWNLPPNQDP----------------------------------DDSYDPSVLSGTLLGHTDAVWLLALSSTKDR  410 (577)
T ss_pred             CceeeeeccCCCCCc----------------------------------ccccCcchhccceeccccceeeeeecccccc
Confidence            999999988733211                                  1111112334568899999999999999999


Q ss_pred             EEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCC
Q psy15995        417 VFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDEN  496 (683)
Q Consensus       417 l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (683)
                      |++++.||+++.|+.........-.......-.++.+....++-...+.....+.+............+...        
T Consensus       411 Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~--------  482 (577)
T KOG0642|consen  411 LLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSA--------  482 (577)
T ss_pred             eeeecCCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccC--------
Confidence            999999999999998877662222122223334444443332222233333333333322111111111000        


Q ss_pred             eEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCC
Q psy15995        497 TLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSN  576 (683)
Q Consensus       497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~  576 (683)
                                        .........+..+..+|...+.+++.+|+.|+++|..++.++.... .|...++++++.|+|
T Consensus       483 ------------------~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~-a~~~svtslai~~ng  543 (577)
T KOG0642|consen  483 ------------------SPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMV-AHKDSVTSLAIDPNG  543 (577)
T ss_pred             ------------------CCcccccCccceEEecCCCCeeEecccCCceecccccccccchhee-eccceecceeecCCC
Confidence                              0000012345677888999999999999999999999998875444 588999999999999


Q ss_pred             CEEEEEeCCCeEEEEECCCCcccc
Q psy15995        577 EYLVASDAHRKVVLYRVPDFELAH  600 (683)
Q Consensus       577 ~~l~~~~~d~~i~i~~~~~~~~~~  600 (683)
                      .+|++++.|+.+++|.+....+..
T Consensus       544 ~~l~s~s~d~sv~l~kld~k~~~~  567 (577)
T KOG0642|consen  544 PYLMSGSHDGSVRLWKLDVKTCVL  567 (577)
T ss_pred             ceEEeecCCceeehhhccchheee
Confidence            999999999999999997665543

>KOG1912|consensus

Probab=99.84  E-value=2.5e-17  Score=156.28  Aligned_cols=459  Identities=17%  Similarity=0.185  Sum_probs=284.4

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeecc-----------
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI-----------  152 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-----------  152 (683)
                      |...-.++.|+|.| ++|-|+.. .|.+-|..+-+.+..++.|+              ..|+.+.|.|-           
T Consensus        14 ~~sN~~A~Dw~~~G-LiAygshs-lV~VVDs~s~q~iqsie~h~--------------s~V~~VrWap~~~p~~llS~~~   77 (1062)
T KOG1912|consen   14 SRSNRNAADWSPSG-LIAYGSHS-LVSVVDSRSLQLIQSIELHQ--------------SAVTSVRWAPAPSPRDLLSPSS   77 (1062)
T ss_pred             CcccccccccCccc-eEEEecCc-eEEEEehhhhhhhhccccCc--------------cceeEEEeccCCCchhccCccc
Confidence            33446789999999 77777655 79999999999998888886              55666666553           


Q ss_pred             -ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcC---CCCe-EEEEecCCceEEEEEEccCCCceeeeec
Q psy15995        153 -GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSP---DNQR-MVVVGEGRERFGHVFMSETGTSVGEISG  227 (683)
Q Consensus       153 -~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (683)
                       .-.||++...|.|.+||...+..+  ..+..+..++..++|-+   +.+. |++....  ..+.+|+.++|+.......
T Consensus        78 ~~lliAsaD~~GrIil~d~~~~s~~--~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~s--s~lvLwntdtG~k~Wk~~y  153 (1062)
T KOG1912|consen   78 SQLLIASADISGRIILVDFVLASVI--NWLSHSNDSVQDLCWVPARDDSRDVLLAIHGS--STLVLWNTDTGEKFWKYDY  153 (1062)
T ss_pred             cceeEEeccccCcEEEEEehhhhhh--hhhcCCCcchhheeeeeccCcchheeEEecCC--cEEEEEEccCCceeecccc
Confidence             237888999999999999887654  34455668889999876   3433 3443333  2378888899999988888


Q ss_pred             CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC-------CCceeeecccccc-------------------------Ce
Q psy15995        228 QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP-------PFKFKMTKQEHSR-------------------------FV  275 (683)
Q Consensus       228 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~-------~~~~~~~~~~~~~-------------------------~v  275 (683)
                      ......|+.+.|-+...+..-+..|.+.+-+.-       .++..+....|..                         ..
T Consensus       154 s~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~  233 (1062)
T KOG1912|consen  154 SHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYC  233 (1062)
T ss_pred             CCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHH
Confidence            888888999999766556666666776666421       1222222222221                         01


Q ss_pred             EEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccC--CCEEEEEECCCcEEEEECCC------
Q psy15995        276 QAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPD--GTQLLTASGDKTCKLWDIET------  347 (683)
Q Consensus       276 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~------  347 (683)
                      ..++|+|.-+.++.......+.++|++-..++.....  ..+.+.-+.+.|+  ...|++...||.+.+|-.+.      
T Consensus       234 a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpi--er~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~  311 (1062)
T KOG1912|consen  234 AQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPI--ERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFK  311 (1062)
T ss_pred             HhhhcChhhhceEEEEeccceEEEcchhhceeEEEEe--ccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCcccc
Confidence            2356788766555555678899999999888888876  5555566666665  45789999999999997654      


Q ss_pred             ----------CceeeEEEecCcceeceEEEEec-CCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCC---
Q psy15995        348 ----------KSVVSEFIMGNQVEDQQVSCLWQ-GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPD---  413 (683)
Q Consensus       348 ----------~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---  413 (683)
                                +.....+...+........+.|. ...++....+|...+|.+.++........+...-+..+.|+-.   
T Consensus       312 ~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~  391 (1062)
T KOG1912|consen  312 KPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKL  391 (1062)
T ss_pred             ccchhhccccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceee
Confidence                      22222222223333334444443 5666677778889999988644332221111111222222211   


Q ss_pred             --CCEEEEEeCCCcEEEEcCCCCCcceeccCCCC-c------ceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceec
Q psy15995        414 --RGTVFTGSHDGFITRWNAKTGENDRVQGAGHG-N------QINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKL  484 (683)
Q Consensus       414 --~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~-~------~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~  484 (683)
                        ...+..-+.||     ....|........... .      .-......-.+++.|...|+|.++|+.++.........
T Consensus       392 v~k~~l~~LS~dg-----~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v~~~fsvh  466 (1062)
T KOG1912|consen  392 VGKTSLISLSDDG-----SHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAVAASFSVH  466 (1062)
T ss_pred             hhhccccchhhcC-----CCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhhhhhhccc
Confidence              12334444454     1111111111100000 0      00001111346788999999999999998776655555


Q ss_pred             CCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcce--eec
Q psy15995        485 GSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKA--ELD  562 (683)
Q Consensus       485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~  562 (683)
                      ....+++.+.+...                           -+.++-....=++++--+.+.+-|+.+|.-....  ...
T Consensus       467 t~~VkgleW~g~ss---------------------------lvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~  519 (1062)
T KOG1912|consen  467 TSLVKGLEWLGNSS---------------------------LVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKP  519 (1062)
T ss_pred             ccceeeeeecccee---------------------------EEEeeeccccccccceeeeEEEEEcccccccccccCCCC
Confidence            55555554443311                           1111111111123333456788888888654333  234


Q ss_pred             CCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCC
Q psy15995        563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDF  596 (683)
Q Consensus       563 ~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~  596 (683)
                      .+.+|+.+..|..++||+....+.-+.+||+++.
T Consensus       520 despI~~irvS~~~~yLai~Fr~~plEiwd~kt~  553 (1062)
T KOG1912|consen  520 DESPIRAIRVSSSGRYLAILFRREPLEIWDLKTL  553 (1062)
T ss_pred             CcCcceeeeecccCceEEEEecccchHHHhhccc
Confidence            6789999999999999999999999999999653

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.84  E-value=1.7e-17  Score=156.40  Aligned_cols=332  Identities=15%  Similarity=0.123  Sum_probs=210.1

Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEE
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVA  323 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~  323 (683)
                      .+++-..++.+.+.|..+.+.+..+......-..+.++|||+++++++.||.|.++|+.+++.+.++.   -.....+++
T Consensus         8 ~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~---~G~~~~~i~   84 (369)
T PF02239_consen    8 FYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIK---VGGNPRGIA   84 (369)
T ss_dssp             EEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE----SSEEEEEE
T ss_pred             EEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEe---cCCCcceEE
Confidence            45667778999999999999999887655544567899999999999999999999999999999987   445678999


Q ss_pred             EccCCCEEEEEE-CCCcEEEEECCCCceeeEEEecCc------ceeceEEEEecCC-EEEEEecCCcEEEEecCCCCcce
Q psy15995        324 WKPDGTQLLTAS-GDKTCKLWDIETKSVVSEFIMGNQ------VEDQQVSCLWQGD-YLLTVSLSGFISYLDVNNPSTPI  395 (683)
Q Consensus       324 ~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~l~~~~~~g~i~~~~~~~~~~~~  395 (683)
                      +++||++++++. ..+.+.++|.++.+.++.+.....      .....+..++... +++..-..+.+.+.|........
T Consensus        85 ~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~  164 (369)
T PF02239_consen   85 VSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLK  164 (369)
T ss_dssp             E--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEE
T ss_pred             EcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccc
Confidence            999999998775 578999999999999988765432      2233444556666 55555667899999988765444


Q ss_pred             eeeeeccccEEEEEEeCCCCEEEEE-eCCCcEEEEcCCCCCcceeccC---CCCcceeEEEEeCCeEEEEEcCCeEEEEe
Q psy15995        396 RVIKGHNKPITALALSPDRGTVFTG-SHDGFITRWNAKTGENDRVQGA---GHGNQINGMKATGELLYTCGIDDTIKQVD  471 (683)
Q Consensus       396 ~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~w~~~~~~~~~~~~~---~~~~~v~~~~~~~~~l~~~~~d~~i~~~~  471 (683)
                      ..............|+|++++++.+ ..+..|.++|..+++.......   .|..+...+-.                  
T Consensus       165 ~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~ph------------------  226 (369)
T PF02239_consen  165 VTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPH------------------  226 (369)
T ss_dssp             EEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEE------------------
T ss_pred             eeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccC------------------
Confidence            3344445667889999999987664 5567899999888766544321   12222221111                  


Q ss_pred             CCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcC
Q psy15995        472 LSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELN  551 (683)
Q Consensus       472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~  551 (683)
                                                                       ...-.--+....+...+..-....+.+|+..
T Consensus       227 -------------------------------------------------p~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~  257 (369)
T PF02239_consen  227 -------------------------------------------------PGFGPVWATSGLGYFAIPLIGTDPVSVHDDY  257 (369)
T ss_dssp             -------------------------------------------------TTTEEEEEEEBSSSSEEEEEE--TTT-STTT
T ss_pred             -------------------------------------------------CCcceEEeeccccceecccccCCccccchhh
Confidence                                                             1000001111222222222222345567777


Q ss_pred             CCccCcceeecCCcCeeEEEECCCCCEEEEE----eCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEee
Q psy15995        552 NKSLSPKAELDHLGPVTDCSFSPSNEYLVAS----DAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGS  627 (683)
Q Consensus       552 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~----~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~  627 (683)
                      ..+........ ..+ .-+..+|+++++.+.    ...++|.++|..+.+........ ....+..+.|++||+.+....
T Consensus       258 ~wkvv~~I~~~-G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~-~~~~~~h~ef~~dG~~v~vS~  334 (369)
T PF02239_consen  258 AWKVVKTIPTQ-GGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPG-PGKRVVHMEFNPDGKEVWVSV  334 (369)
T ss_dssp             BTSEEEEEE-S-SSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHH-HT--EEEEEE-TTSSEEEEEE
T ss_pred             cCeEEEEEECC-CCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEecc-CCCcEeccEECCCCCEEEEEE
Confidence            77766555542 333 778889999999988    45689999999998776554422 223489999999999766544


Q ss_pred             cCC--cEEEEeCCCCceeeEeec
Q psy15995        628 LDT--TIIIWSLASPAKHIIIKN  648 (683)
Q Consensus       628 ~d~--~v~iw~~~~~~~~~~~~~  648 (683)
                      .++  .|.+||..+.+...+++.
T Consensus       335 ~~~~~~i~v~D~~Tl~~~~~i~~  357 (369)
T PF02239_consen  335 WDGNGAIVVYDAKTLKEKKRIPV  357 (369)
T ss_dssp             E--TTEEEEEETTTTEEEEEEE-
T ss_pred             ecCCCEEEEEECCCcEEEEEEEe
Confidence            443  699999999999888864

...

>KOG4227|consensus

Probab=99.83  E-value=1.1e-18  Score=151.72  Aligned_cols=322  Identities=17%  Similarity=0.220  Sum_probs=224.9

Q ss_pred             ccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEe
Q psy15995         79 DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIAS  158 (683)
Q Consensus        79 ~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  158 (683)
                      +.+.+|.+-|+++.||.++++||+|+.|..+++|++...-..+.  ..    ++ .+..-.+...|.+++|....++|.+
T Consensus        50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~--~K----PI-~~~~~~H~SNIF~L~F~~~N~~~~S  122 (609)
T KOG4227|consen   50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKT--PK----PI-GVMEHPHRSNIFSLEFDLENRFLYS  122 (609)
T ss_pred             hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcC--CC----Cc-eeccCccccceEEEEEccCCeeEec
Confidence            34668999999999999999999999999999999865311111  00    00 0111223367999999999999999


Q ss_pred             ecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC---ceeeeecCCcCeEEE
Q psy15995        159 GDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT---SVGEISGQSKPINSC  235 (683)
Q Consensus       159 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~  235 (683)
                      |..+++|.+-|+++.+.+....-....+.|+.+..+|-.+.+++++.++.  +.+|+.....   ....+.........+
T Consensus       123 G~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~--V~~~D~Rd~~~~~~~~~~AN~~~~F~t~  200 (609)
T KOG4227|consen  123 GERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKL--VSFIDNRDRQNPISLVLPANSGKNFYTA  200 (609)
T ss_pred             CCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCce--EEEEeccCCCCCCceeeecCCCccceee
Confidence            99999999999999887766655555679999999999888888887643  5566655332   222333455667899


Q ss_pred             EeecCCCeEEEEeeCCCeEEEEcCCCCceee-------eccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee-E
Q psy15995        236 DFKPSRPFRIITGSEDNTIAVFEGPPFKFKM-------TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL-V  307 (683)
Q Consensus       236 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-~  307 (683)
                      .|+|..+.+|++.+..+-+-+||.+......       .++.....-..+.|+|+|+.|++--....-.+||+-+..+ +
T Consensus       201 ~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V  280 (609)
T KOG4227|consen  201 EFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFV  280 (609)
T ss_pred             eecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeeccccee
Confidence            9999999889999999999999976443211       1111122235678999999998887766777888877443 3


Q ss_pred             EeccC----CccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEE-ecCcceeceEEEEecCCEEEEEecCCc
Q psy15995        308 SELGN----PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFI-MGNQVEDQQVSCLWQGDYLLTVSLSGF  382 (683)
Q Consensus       308 ~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~g~  382 (683)
                      ..+..    ......+.+++|..|- .+++|+.+-.|.+|.+.......-+. .++........      .++       
T Consensus       281 ~k~D~N~~GY~N~~T~KS~~F~~D~-~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~------~~i-------  346 (609)
T KOG4227|consen  281 LKSDHNPNGYCNIKTIKSMTFIDDY-TVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSE------IFI-------  346 (609)
T ss_pred             EeccCCCCcceeeeeeeeeeeecce-eeeccCcccceEEEecCCCccccCccccCcchhhCchh------hee-------
Confidence            33321    0123457788887554 48999999899999886433221110 01100000000      000       


Q ss_pred             EEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        383 ISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       383 i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                               ...+..+++|..-+..+.|+|...+|++.+-.+.+++|.-.
T Consensus       347 ---------~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~~  387 (609)
T KOG4227|consen  347 ---------EKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSDH  387 (609)
T ss_pred             ---------cceeEEEecccccccceeecCCcceEeccchhhheeccccc
Confidence                     33456789999999999999999999999999999999743

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.83  E-value=1.4e-17  Score=158.86  Aligned_cols=269  Identities=12%  Similarity=0.117  Sum_probs=176.6

Q ss_pred             EecCCeEEEEeCCC-Cc--ccccccCcccceEEEEECCCCcEEEEe-cCCCCEEEEeCCCcccccccccccCCCCcccce
Q psy15995         61 YTNGNSVIIRNIEN-PA--ISDIYTEHSCAVNVAKYSPSGFYIASG-DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIG  136 (683)
Q Consensus        61 ~~~~~~i~v~~~~~-~~--~~~~~~~h~~~v~~~~~s~d~~~las~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  136 (683)
                      ...++.|.+|++.+ ++  .+..+. +.+....++++||+++|+++ ..++.|.+|++.....+......+         
T Consensus         8 ~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~---------   77 (330)
T PRK11028          8 SPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP---------   77 (330)
T ss_pred             cCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec---------
Confidence            34678999999964 33  344443 44667889999999998765 457889999997321111111111         


Q ss_pred             eeeeecceeeeEeeccceEEEeecC-CccEEEEeccccceee-eccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEE
Q psy15995        137 TLLSLTSIRNILVLSIGFYIASGDI-SGKVRIWDTVNKEHIL-KNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF  214 (683)
Q Consensus       137 ~~~~~~~i~~~~~s~~~~~l~~~~~-d~~i~iwd~~~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~  214 (683)
                         .......++++|++++|++++. ++.|.+|++++...+. .............++++|++++++++....+. +.+|
T Consensus        78 ---~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~-v~v~  153 (330)
T PRK11028         78 ---LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDR-IRLF  153 (330)
T ss_pred             ---CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCE-EEEE
Confidence               0123567999999998887764 7899999997432111 11111122456788999999999887765443 7888


Q ss_pred             EccCCCceee-----ee-cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC--Cc--eeeecccc------ccCeEEE
Q psy15995        215 MSETGTSVGE-----IS-GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP--FK--FKMTKQEH------SRFVQAV  278 (683)
Q Consensus       215 ~~~~~~~~~~-----~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~--~~--~~~~~~~~------~~~v~~~  278 (683)
                      ++++...+..     .. ........+.|+|++++++++...++.|.+|+++.  ++  ....+..+      ......+
T Consensus       154 d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i  233 (330)
T PRK11028        154 TLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADI  233 (330)
T ss_pred             EECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeE
Confidence            8876332211     11 12344678999999997444444599999999873  22  23222211      1233468


Q ss_pred             EECCCCCEEEEEcC-CCcEEEEeCCCCe----eEEeccCCccccCeEEEEEccCCCEEEEEEC-CCcEEEEECC
Q psy15995        279 RYSPSGSHFASAGF-DGKVFLYDGASAD----LVSELGNPAHKGGVYAVAWKPDGTQLLTASG-DKTCKLWDIE  346 (683)
Q Consensus       279 ~~~~~~~~l~~~~~-dg~i~iw~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~  346 (683)
                      .++|++++++++.. ++.|.+|++....    .+..+.   -......+.++|++++|+++.. ++.|.+|++.
T Consensus       234 ~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~---~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~  304 (330)
T PRK11028        234 HITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQP---TETQPRGFNIDHSGKYLIAAGQKSHHISVYEID  304 (330)
T ss_pred             EECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEe---ccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence            89999999998864 6899999985432    222222   1124567899999999998775 8899999875

>KOG1188|consensus

Probab=99.83  E-value=6.4e-19  Score=150.58  Aligned_cols=284  Identities=18%  Similarity=0.238  Sum_probs=194.0

Q ss_pred             CEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc--CCCEEEEEECCCcEEEEECCCCceeeEEEecCccee
Q psy15995        285 SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP--DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVED  362 (683)
Q Consensus       285 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  362 (683)
                      ..+|++...|.|++||..+++.+..+..  +...+..+.|..  ....+.+++.||+|++||++.......+........
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~--~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~  118 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKG--PPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGT  118 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecC--CCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCC
Confidence            4688888899999999999999999976  777888888876  466899999999999999998877766655544422


Q ss_pred             ceEEEE--ecCCEEEEEec----CCcEEEEecCCCCcceee-eeeccccEEEEEEeCC-CCEEEEEeCCCcEEEEcCCCC
Q psy15995        363 QQVSCL--WQGDYLLTVSL----SGFISYLDVNNPSTPIRV-IKGHNKPITALALSPD-RGTVFTGSHDGFITRWNAKTG  434 (683)
Q Consensus       363 ~~~~~~--~~~~~l~~~~~----~g~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~w~~~~~  434 (683)
                      ...++.  .+++.+++|++    +-.+.+||.+...++++. ...|.+.|++++|+|. .++|++|+.||.|.+||+...
T Consensus       119 ~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d  198 (376)
T KOG1188|consen  119 PFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD  198 (376)
T ss_pred             cceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence            333333  35667777754    567999999987775554 4569999999999994 578999999999999999765


Q ss_pred             Cccee--ccCCCCcceeEEEEeC---CeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEE
Q psy15995        435 ENDRV--QGAGHGNQINGMKATG---ELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIV  509 (683)
Q Consensus       435 ~~~~~--~~~~~~~~v~~~~~~~---~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (683)
                      .....  ....+...|..+.|.+   +.+.+.+..+...+|++..+................                  
T Consensus       199 ~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~------------------  260 (376)
T KOG1188|consen  199 NEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDL------------------  260 (376)
T ss_pred             cchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhH------------------
Confidence            33221  1135677899999983   369999999999999998875221111000000000                  


Q ss_pred             eCCceeeeecCCCCCcEEEEccCCCEEEEEcC-CCcEEEEEcC---CCcc---CcceeecCCcCeeEEEECCCCCEEEEE
Q psy15995        510 ENGAKVSSLPIDYEPSSISLDHEHGLVAVGGA-DSKVHIYELN---NKSL---SPKAELDHLGPVTDCSFSPSNEYLVAS  582 (683)
Q Consensus       510 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~---~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~  582 (683)
                           .......+-|.+. ...+....++++. -++..++-+.   ++..   ......+|..-|.++.|...+.++.+|
T Consensus       261 -----r~~~~~dY~I~~~-~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TG  334 (376)
T KOG1188|consen  261 -----RKEDNCDYVINEH-SPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTG  334 (376)
T ss_pred             -----Hhhhhhhheeecc-cCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeecc
Confidence                 0000000011111 1123344444444 5555555443   2222   222223467778899999899999999


Q ss_pred             eCCCeEEEEECC
Q psy15995        583 DAHRKVVLYRVP  594 (683)
Q Consensus       583 ~~d~~i~i~~~~  594 (683)
                      ++||.+.+|..+
T Consensus       335 GEDG~l~~Wk~~  346 (376)
T KOG1188|consen  335 GEDGLLQAWKVE  346 (376)
T ss_pred             CCCceEEEEecC
Confidence            999999999963

>KOG0303|consensus

Probab=99.83  E-value=2.4e-18  Score=149.91  Aligned_cols=261  Identities=17%  Similarity=0.260  Sum_probs=186.8

Q ss_pred             CCCeEEEe----cCCeEEEEeCC-CCcc---cccccCcccceEEEEECC-CCcEEEEecCCCCEEEEeCCCccccccccc
Q psy15995         55 KGKNFLYT----NGNSVIIRNIE-NPAI---SDIYTEHSCAVNVAKYSP-SGFYIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        55 ~~~~l~~~----~~~~i~v~~~~-~~~~---~~~~~~h~~~v~~~~~s~-d~~~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      +.++||..    .+|...|.-+. +|+.   ...+.||+++|..++|+| +...|||||+|.+|.||++..+....    
T Consensus        43 NPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~----  118 (472)
T KOG0303|consen   43 NPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTR----  118 (472)
T ss_pred             CCceEEEEEecCCCcceeecccccccccCCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCccccc----
Confidence            45777764    23455555543 4433   334679999999999999 66789999999999999986652110    


Q ss_pred             ccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEec
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE  205 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  205 (683)
                                                                            .+                        
T Consensus       119 ------------------------------------------------------~l------------------------  120 (472)
T KOG0303|consen  119 ------------------------------------------------------DL------------------------  120 (472)
T ss_pred             ------------------------------------------------------Cc------------------------
Confidence                                                                  00                        


Q ss_pred             CCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCC
Q psy15995        206 GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGS  285 (683)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~  285 (683)
                                   -+++..+.+|...|..++|+|...+.|++++.|.+|.+|++.+++.+.++. |.+.|.++.|+.||.
T Consensus       121 -------------tepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs  186 (472)
T KOG0303|consen  121 -------------TEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGS  186 (472)
T ss_pred             -------------ccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCc
Confidence                         023445678889999999999988899999999999999999999998888 999999999999999


Q ss_pred             EEEEEcCCCcEEEEeCCCCeeEEeccCCcccc-CeEEEEEccCCCEEEEEE---CCCcEEEEECCCCceeeEEE-ecCcc
Q psy15995        286 HFASAGFDGKVFLYDGASADLVSELGNPAHKG-GVYAVAWKPDGTQLLTAS---GDKTCKLWDIETKSVVSEFI-MGNQV  360 (683)
Q Consensus       286 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~-~~~~~  360 (683)
                      +|++++.|..|++||.++++.+..-..  |.+ .-..+.|..++..+-+|-   .+..+.+||..+.+.-..+. .....
T Consensus       187 ~l~TtckDKkvRv~dpr~~~~v~e~~~--heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSn  264 (472)
T KOG0303|consen  187 LLCTTCKDKKVRVIDPRRGTVVSEGVA--HEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSN  264 (472)
T ss_pred             eeeeecccceeEEEcCCCCcEeeeccc--ccCCCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEeccCC
Confidence            999999999999999999999888743  543 345566777888444442   36789999987654432222 22222


Q ss_pred             eeceEEEEecCCEE-EEEecCCcEEEEecCCCCcceeeeee--ccccEEEEEEeCC
Q psy15995        361 EDQQVSCLWQGDYL-LTVSLSGFISYLDVNNPSTPIRVIKG--HNKPITALALSPD  413 (683)
Q Consensus       361 ~~~~~~~~~~~~~l-~~~~~~g~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~  413 (683)
                      ....-.+.++.+.+ ++|-.|+.|+.|.+.+...-+..+..  ...+-..+.|.|.
T Consensus       265 Gvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln~f~S~epQRG~g~mPK  320 (472)
T KOG0303|consen  265 GVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLNTFSSKEPQRGMGFMPK  320 (472)
T ss_pred             ceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEecccccCCcccccccccc
Confidence            22222233444444 56667999999999885544444433  2345556666664

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.83  E-value=1.1e-17  Score=157.77  Aligned_cols=310  Identities=17%  Similarity=0.150  Sum_probs=204.5

Q ss_pred             cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeec
Q psy15995         63 NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLT  142 (683)
Q Consensus        63 ~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (683)
                      .++.|.|.|.++.+.+..+......-..+.|+|||+++.+++.||.|.++|+.+.+.+.++...               .
T Consensus        14 ~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G---------------~   78 (369)
T PF02239_consen   14 GSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVG---------------G   78 (369)
T ss_dssp             GGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-S---------------S
T ss_pred             CCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecC---------------C
Confidence            5789999999999999988865555556789999999999999999999999999988877665               5


Q ss_pred             ceeeeEeeccceEEEeec-CCccEEEEeccccceeeecccccc-----CCCeeEEEEcCCCCeEEEEecCCceEEEEEEc
Q psy15995        143 SIRNILVLSIGFYIASGD-ISGKVRIWDTVNKEHILKNEFHPI-----GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMS  216 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~-----~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~  216 (683)
                      ....+++|+||++++++. .++.+.++|.++.+.+........     ..++.++..+|....+++.-.+... +.+.+.
T Consensus        79 ~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~-I~vVdy  157 (369)
T PF02239_consen   79 NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGE-IWVVDY  157 (369)
T ss_dssp             EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTE-EEEEET
T ss_pred             CcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCe-EEEEEe
Confidence            567899999999998775 589999999999887765544332     3467888889988866666555433 334444


Q ss_pred             cCCCcee-eeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc----ccccCeEEEE-------E--CC
Q psy15995        217 ETGTSVG-EISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ----EHSRFVQAVR-------Y--SP  282 (683)
Q Consensus       217 ~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~----~~~~~v~~~~-------~--~~  282 (683)
                      ...+.+. .............|+|++++++++...++.|.++|..+++....+.    .|..+...+-       |  ..
T Consensus       158 ~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~  237 (369)
T PF02239_consen  158 SDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSG  237 (369)
T ss_dssp             TTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEB
T ss_pred             ccccccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeecc
Confidence            4433332 2333455677899999999877777888899999999988776542    2443433321       1  11


Q ss_pred             CCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEE----ECCCcEEEEECCCCceeeEEEecC
Q psy15995        283 SGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA----SGDKTCKLWDIETKSVVSEFIMGN  358 (683)
Q Consensus       283 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~----~~dg~i~iwd~~~~~~~~~~~~~~  358 (683)
                      .+...++.-....+.+|+..+.+.++.+..  ...+ .-+..+|+++++.+.    ...+.|.++|.++.+.+.++....
T Consensus       238 ~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~--~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~  314 (369)
T PF02239_consen  238 LGYFAIPLIGTDPVSVHDDYAWKVVKTIPT--QGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGP  314 (369)
T ss_dssp             SSSSEEEEEE--TTT-STTTBTSEEEEEE---SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHH
T ss_pred             ccceecccccCCccccchhhcCeEEEEEEC--CCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccC
Confidence            222222222234566788889999999875  4445 788889999999998    445789999999997776665445


Q ss_pred             cceeceEEEEecCCEEEEEecCC--cEEEEecCCC
Q psy15995        359 QVEDQQVSCLWQGDYLLTVSLSG--FISYLDVNNP  391 (683)
Q Consensus       359 ~~~~~~~~~~~~~~~l~~~~~~g--~i~~~~~~~~  391 (683)
                      ......+.++++|+++.+...++  .|.+||..+.
T Consensus       315 ~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl  349 (369)
T PF02239_consen  315 GKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTL  349 (369)
T ss_dssp             T--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTT
T ss_pred             CCcEeccEECCCCCEEEEEEecCCCEEEEEECCCc
Confidence            55578889999999877766544  6999999873

...

>KOG1524|consensus

Probab=99.82  E-value=2.3e-17  Score=149.67  Aligned_cols=271  Identities=16%  Similarity=0.143  Sum_probs=188.7

Q ss_pred             CcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC
Q psy15995         83 EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS  162 (683)
Q Consensus        83 ~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  162 (683)
                      .|...|.|+.|+.+...+.+++++..+.-||+.+.+ .......+.--+     +..+.. -.+..=-.....++.++.|
T Consensus        12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s-~~~~~~p~df~p-----t~~h~~-~rs~~~g~~~d~~~i~s~D   84 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDS-VEVAKLPDDFVP-----TDMHLG-GRSSGGGKGSDTLLICSND   84 (737)
T ss_pred             ccceeEEeecccccceEEEeccCceEEEeecccchh-hhhhhCCcccCC-----cccccc-ccccCCCCCcceEEEEcCC
Confidence            577888899999988777777666555555554432 221111110000     000000 0000001123478888999


Q ss_pred             ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc-CCCceeeeecCCcCeEEEEeecCC
Q psy15995        163 GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE-TGTSVGEISGQSKPINSCDFKPSR  241 (683)
Q Consensus       163 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~  241 (683)
                      |.+.+.+-...   ......+|.+.+.+-.|+|||.-|+++++++    .+-.|. +|....++.....+|.|++|.|+.
T Consensus        85 Gkf~il~k~~r---VE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG----~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S  157 (737)
T KOG1524|consen   85 GRFVILNKSAR---VERSISAHAAAISSGRWSPDGAGLLTAGEDG----VIKIWSRSGMLRSTVVQNEESIRCARWAPNS  157 (737)
T ss_pred             ceEEEecccch---hhhhhhhhhhhhhhcccCCCCceeeeecCCc----eEEEEeccchHHHHHhhcCceeEEEEECCCC
Confidence            99988875432   3456778889999999999999999999884    445554 466666677788899999999999


Q ss_pred             CeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEE
Q psy15995        242 PFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYA  321 (683)
Q Consensus       242 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~  321 (683)
                      +..+++.+  +.+.|=.+.....+...+.|.+-|.++.|++..+.+++|+.|-..++||.. |..+..-.  .|..+|++
T Consensus       158 ~~vl~c~g--~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~--~~ey~ITS  232 (737)
T KOG1524|consen  158 NSIVFCQG--GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSA--AEEYAITS  232 (737)
T ss_pred             CceEEecC--CeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCC--hhccceee
Confidence            87555544  556666666666777888999999999999999999999999999999954 55444443  39999999


Q ss_pred             EEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeec
Q psy15995        322 VAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGH  401 (683)
Q Consensus       322 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~  401 (683)
                      ++|.|+ +.++.++. +++++=                                                       ...
T Consensus       233 va~npd-~~~~v~S~-nt~R~~-------------------------------------------------------~p~  255 (737)
T KOG1524|consen  233 VAFNPE-KDYLLWSY-NTARFS-------------------------------------------------------SPR  255 (737)
T ss_pred             eeeccc-cceeeeee-eeeeec-------------------------------------------------------CCC
Confidence            999999 66666654 344411                                                       113


Q ss_pred             cccEEEEEEeCCCCEEEEEeCCCcEEEE
Q psy15995        402 NKPITALALSPDRGTVFTGSHDGFITRW  429 (683)
Q Consensus       402 ~~~v~~~~~~~~~~~l~~~~~dg~i~~w  429 (683)
                      .+.|..++|++||..++.|...|.+.+=
T Consensus       256 ~GSifnlsWS~DGTQ~a~gt~~G~v~~A  283 (737)
T KOG1524|consen  256 VGSIFNLSWSADGTQATCGTSTGQLIVA  283 (737)
T ss_pred             ccceEEEEEcCCCceeeccccCceEEEe
Confidence            4668889999999999999888877553

>KOG4227|consensus

Probab=99.82  E-value=4.7e-18  Score=147.87  Aligned_cols=317  Identities=15%  Similarity=0.108  Sum_probs=217.3

Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC------Cceeeecc-ccccCeEEEEECCCCCEEEEEcCC
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP------FKFKMTKQ-EHSRFVQAVRYSPSGSHFASAGFD  293 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d  293 (683)
                      ..+.+.+|.+.|+++.|+.++++ |++|+.|..+++|++..      .+.+.... .|...|.|++|......+++|..+
T Consensus        48 ~qKD~~~H~GCiNAlqFS~N~~~-L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~  126 (609)
T KOG4227|consen   48 CQKDVREHTGCINALQFSHNDRF-LASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERW  126 (609)
T ss_pred             hhhhhhhhccccceeeeccCCeE-EeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCc
Confidence            34457799999999999999986 99999999999998653      23343333 456899999999999999999999


Q ss_pred             CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCc-eeeEEEec-CcceeceEEEEe-c
Q psy15995        294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKS-VVSEFIMG-NQVEDQQVSCLW-Q  370 (683)
Q Consensus       294 g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~-~~~~~~~~~~~~-~  370 (683)
                      ++|...|+++.+.+..+......+.|+.+..+|-.+.|++.+.++.|.+||.+..+ ....+... .........+.| .
T Consensus       127 ~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~  206 (609)
T KOG4227|consen  127 GTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPET  206 (609)
T ss_pred             ceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCC
Confidence            99999999999999888754455699999999999999999999999999998766 33333222 223334455566 4


Q ss_pred             CCEEEEEecCCcEEEEecCCCCcceeeeeec------cccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCC-
Q psy15995        371 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGH------NKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAG-  443 (683)
Q Consensus       371 ~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~-  443 (683)
                      ..++++.+..+.+.+||.+.+..++....+.      ...-.++.|+|+|+.+.+--....-.+||+.+..+....... 
T Consensus       207 P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N  286 (609)
T KOG4227|consen  207 PALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHN  286 (609)
T ss_pred             ceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCC
Confidence            5678888999999999999877665443322      223467889999999988776666677787665443332211 


Q ss_pred             -----CCcceeEEEEe-CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeee
Q psy15995        444 -----HGNQINGMKAT-GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSS  517 (683)
Q Consensus       444 -----~~~~v~~~~~~-~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (683)
                           ....+.+++|. ...+++|+.+-.|.+|.+....-..                                      
T Consensus       287 ~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~~~ds~--------------------------------------  328 (609)
T KOG4227|consen  287 PNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPRANDSY--------------------------------------  328 (609)
T ss_pred             CCcceeeeeeeeeeeecceeeeccCcccceEEEecCCCcccc--------------------------------------
Confidence                 11234444554 3335555666666666654321000                                      


Q ss_pred             ecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECC
Q psy15995        518 LPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVP  594 (683)
Q Consensus       518 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~  594 (683)
                           ..+.+  ..+...+     -..|.|    .+.  .....+|.+-+..+.|+|...+|++.+-.+.++||.-.
T Consensus       329 -----G~~~I--G~~~~~~-----~~~~~i----~~~--~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~~  387 (609)
T KOG4227|consen  329 -----GFTQI--GHDEEEM-----PSEIFI----EKE--LTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSDH  387 (609)
T ss_pred             -----Ccccc--CcchhhC-----chhhee----cce--eEEEecccccccceeecCCcceEeccchhhheeccccc
Confidence                 00000  0000000     000000    001  12334688899999999999999999999999999754

>KOG0649|consensus

Probab=99.82  E-value=4.4e-17  Score=132.49  Aligned_cols=236  Identities=16%  Similarity=0.194  Sum_probs=176.4

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEecccc--------ceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEE
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNK--------EHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHV  213 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~--------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~  213 (683)
                      ..|..-+++|.+++|++|..+|.|.+..+.+-        ........++|+++++.++|.  ..+|++++.+   .++-
T Consensus        11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~gdG---~V~g   85 (325)
T KOG0649|consen   11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGGDG---LVYG   85 (325)
T ss_pred             HHHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeeccCc---eEEE
Confidence            34556689999999999999999999988642        112233457899999999999  4466666653   2566


Q ss_pred             EEccCCCc------eeee--ecC-----CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEE
Q psy15995        214 FMSETGTS------VGEI--SGQ-----SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRY  280 (683)
Q Consensus       214 ~~~~~~~~------~~~~--~~~-----~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~  280 (683)
                      |.|+....      +.+.  ..|     -..|+++...|..+. ++.++.|+.++-||+++++..+.+++|++.|.++.-
T Consensus        86 w~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enS-i~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~  164 (325)
T KOG0649|consen   86 WEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENS-ILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVG  164 (325)
T ss_pred             eeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCc-EEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeee
Confidence            66664322      1111  112     246899999998886 666668999999999999999999999999999998


Q ss_pred             CCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCcc--------ccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceee
Q psy15995        281 SPSGSHFASAGFDGKVFLYDGASADLVSELGNPAH--------KGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVS  352 (683)
Q Consensus       281 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~--------~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  352 (683)
                      -.....+++|+.||++++||.++++.+..+....+        ...|-+++.+  ...+++|+. ..+.+|+++..+...
T Consensus       165 R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~--edWlvCGgG-p~lslwhLrsse~t~  241 (325)
T KOG0649|consen  165 RNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVN--EDWLVCGGG-PKLSLWHLRSSESTC  241 (325)
T ss_pred             cccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEecc--CceEEecCC-CceeEEeccCCCceE
Confidence            66666799999999999999999999888764222        2345555554  557777654 579999999999888


Q ss_pred             EEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCC
Q psy15995        353 EFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN  390 (683)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~  390 (683)
                      .+.....    .-.+....+.+++++..+.+.-|.+..
T Consensus       242 vfpipa~----v~~v~F~~d~vl~~G~g~~v~~~~l~G  275 (325)
T KOG0649|consen  242 VFPIPAR----VHLVDFVDDCVLIGGEGNHVQSYTLNG  275 (325)
T ss_pred             EEecccc----eeEeeeecceEEEeccccceeeeeecc
Confidence            8765433    233445778888999888888888764

>KOG1007|consensus

Probab=99.82  E-value=6.2e-18  Score=141.03  Aligned_cols=259  Identities=19%  Similarity=0.266  Sum_probs=190.2

Q ss_pred             ccceeecCCCcccCCCeEEEeeCCCCCeEEEe-cC--------CeEEEEeCCCC---------ccccccc-CcccceEEE
Q psy15995         31 GNKYIFATLPRTQRGQPIVLGGDPKGKNFLYT-NG--------NSVIIRNIENP---------AISDIYT-EHSCAVNVA   91 (683)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~--------~~i~v~~~~~~---------~~~~~~~-~h~~~v~~~   91 (683)
                      +...+....-..+.|.+..++-+|-.+.|.+. ..        ..+.||.++..         +.+..|. .+-+.|.|+
T Consensus        50 e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cv  129 (370)
T KOG1007|consen   50 EGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCV  129 (370)
T ss_pred             ccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeE
Confidence            33344444445567889999999966665543 21        26889998653         2333444 566799999


Q ss_pred             EECCCCcEEEEecCCCCEEEEeCCCcccc-cccccccCCCCcccceeeeeecceeeeEeec--cceEEEeecCCccEEEE
Q psy15995         92 KYSPSGFYIASGDISGKVRIWDTVNKEHI-LKNEFHPIGGPIKDIGTLLSLTSIRNILVLS--IGFYIASGDISGKVRIW  168 (683)
Q Consensus        92 ~~s~d~~~las~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~d~~i~iw  168 (683)
                      .|-|+++.||+-. |..|.+|++.....+ ..+....         .........+-+|+|  ||..+++.+ |++++.|
T Consensus       130 ew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~---------s~e~~~~ftsg~WspHHdgnqv~tt~-d~tl~~~  198 (370)
T KOG1007|consen  130 EWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSE---------SAEMRHSFTSGAWSPHHDGNQVATTS-DSTLQFW  198 (370)
T ss_pred             EEcCCCCeeEEec-cCceEEEEcccCcchheeecccc---------cccccceecccccCCCCccceEEEeC-CCcEEEE
Confidence            9999999999876 778999999988653 2222211         111224556677888  777777665 7899999


Q ss_pred             eccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc-CCCceeeeecCCcCeEEEEeecCCCeEEEE
Q psy15995        169 DTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE-TGTSVGEISGQSKPINSCDFKPSRPFRIIT  247 (683)
Q Consensus       169 d~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  247 (683)
                      |+.+.++...+. .+|...+..+.|+|+.+++++.+++.. .+++|+.. +..++.++.+|...|+++.|+|....++++
T Consensus       199 D~RT~~~~~sI~-dAHgq~vrdlDfNpnkq~~lvt~gDdg-yvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs  276 (370)
T KOG1007|consen  199 DLRTMKKNNSIE-DAHGQRVRDLDFNPNKQHILVTCGDDG-YVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILS  276 (370)
T ss_pred             Eccchhhhcchh-hhhcceeeeccCCCCceEEEEEcCCCc-cEEEEeccCCCccccccCCCceEEEEEEecCccceEEEe
Confidence            999877655443 457788999999999988777766543 36777766 467899999999999999999988778999


Q ss_pred             eeCCCeEEEEcCCC-----------------------------CceeeeccccccCeEEEEECCCCC-EEEEEcCCCcEE
Q psy15995        248 GSEDNTIAVFEGPP-----------------------------FKFKMTKQEHSRFVQAVRYSPSGS-HFASAGFDGKVF  297 (683)
Q Consensus       248 ~~~d~~i~iw~~~~-----------------------------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~  297 (683)
                      ++.|..|.+|....                             ...+.++..|.+.|.+++|+.-.. .+|+-+.||.+.
T Consensus       277 ~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRvi  356 (370)
T KOG1007|consen  277 GGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVI  356 (370)
T ss_pred             cCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEE
Confidence            99999999994221                             112345678999999999998777 567789999998


Q ss_pred             EEeCC
Q psy15995        298 LYDGA  302 (683)
Q Consensus       298 iw~~~  302 (683)
                      |=.+.
T Consensus       357 Is~V~  361 (370)
T KOG1007|consen  357 ISSVP  361 (370)
T ss_pred             eecCC
Confidence            86654

>KOG1587|consensus

Probab=99.82  E-value=5.1e-18  Score=163.78  Aligned_cols=271  Identities=16%  Similarity=0.240  Sum_probs=194.4

Q ss_pred             CeEEEEeCCCC-cccccccCcccceEEEEECC-CCcEEEEecCCCCEEEEeCCCccc--ccccccccCCCCcccceeeee
Q psy15995         65 NSVIIRNIENP-AISDIYTEHSCAVNVAKYSP-SGFYIASGDISGKVRIWDTVNKEH--ILKNEFHPIGGPIKDIGTLLS  140 (683)
Q Consensus        65 ~~i~v~~~~~~-~~~~~~~~h~~~v~~~~~s~-d~~~las~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~  140 (683)
                      ..+.||+++.. .....+ .-...|+|++|+| +..+||.|..+|+|.+||+..+..  ...+..+          ...+
T Consensus       222 ~~~~vW~~~~p~~Pe~~~-~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~----------~~sh  290 (555)
T KOG1587|consen  222 GVLLVWSLKNPNTPELVL-ESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSAL----------EVSH  290 (555)
T ss_pred             ceEEEEecCCCCCceEEE-ecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccc----------cccC
Confidence            37999999887 333333 3567899999999 667888999999999999988765  2222222          1223


Q ss_pred             ecceeeeEeeccce--EEEeecCCccEEEEeccccceeee-----ccc-----cccCCCeeEEEEcCCCCeEEEEecCCc
Q psy15995        141 LTSIRNILVLSIGF--YIASGDISGKVRIWDTVNKEHILK-----NEF-----HPIGGPIKDIAWSPDNQRMVVVGEGRE  208 (683)
Q Consensus       141 ~~~i~~~~~s~~~~--~l~~~~~d~~i~iwd~~~~~~~~~-----~~~-----~~~~~~i~~~~~s~~~~~l~~~~~~~~  208 (683)
                      ..++..+.|..+..  -+++++.||.|..|++..-.....     ...     ......+++++|.+.....++++.+.+
T Consensus       291 ~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G  370 (555)
T KOG1587|consen  291 SEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEG  370 (555)
T ss_pred             CcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCc
Confidence            36777787777554  499999999999998865332111     011     012256889999997655555555543


Q ss_pred             eEEEEEEccC---C----CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC-CCceeeeccccccCeEEEEE
Q psy15995        209 RFGHVFMSET---G----TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP-PFKFKMTKQEHSRFVQAVRY  280 (683)
Q Consensus       209 ~~~~~~~~~~---~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~~~~v~~~~~  280 (683)
                      .+........   .    +.......|.++|+++.++|-....+++++ |-++++|... ....+..+..+...+++++|
T Consensus       371 ~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaW  449 (555)
T KOG1587|consen  371 KVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAW  449 (555)
T ss_pred             EEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhccceeeeeEE
Confidence            3222122221   1    223456778999999999999987566665 9999999977 66677777788888999999


Q ss_pred             CCCCC-EEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCC
Q psy15995        281 SPSGS-HFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIET  347 (683)
Q Consensus       281 ~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  347 (683)
                      ||-.. .++++..||.+.+||+...........+.+......+.|+++++.|++|...|.+.+|++..
T Consensus       450 SptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  450 SPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             cCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            99876 77788889999999997654433333333566677888888999999999999999999964

>KOG1517|consensus

Probab=99.81  E-value=8.9e-18  Score=164.76  Aligned_cols=302  Identities=18%  Similarity=0.239  Sum_probs=214.9

Q ss_pred             cCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCc-cccCeEEEEEcc--CCCEEEEEECCCcEEEEECCCCc
Q psy15995        273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPA-HKGGVYAVAWKP--DGTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       273 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      .....+.|+|-...++++...-.|++||.+.++....+.... ....|+.+.+-.  |..++++++.||.|+||+-....
T Consensus      1065 ~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~ 1144 (1387)
T KOG1517|consen 1065 QPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADK 1144 (1387)
T ss_pred             CCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccc
Confidence            356778899998999999878899999999999887775422 345788888865  56689999999999999754332


Q ss_pred             -eeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEE
Q psy15995        350 -VVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITR  428 (683)
Q Consensus       350 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~  428 (683)
                       ...+                    ++++        |..-.     ....+..+.=.-+.|.....+|++++.-..|+|
T Consensus      1145 ~~~~e--------------------LVTa--------w~~Ls-----~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRI 1191 (1387)
T KOG1517|consen 1145 WKKPE--------------------LVTA--------WSSLS-----DQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRI 1191 (1387)
T ss_pred             cCCce--------------------eEEe--------ecccc-----ccCccCCCCCeeeehhhhCCeEEecCCeeEEEE
Confidence             1111                    1111        00000     001111111133567777777777777889999


Q ss_pred             EcCCCCCcceeccCCCCcceeEEEEe---CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEece
Q psy15995        429 WNAKTGENDRVQGAGHGNQINGMKAT---GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQ  505 (683)
Q Consensus       429 w~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (683)
                      ||..........+.+....+++++.+   ++.+++|..||.+++||.+.......                         
T Consensus      1192 WDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~------------------------- 1246 (1387)
T KOG1517|consen 1192 WDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSL------------------------- 1246 (1387)
T ss_pred             EecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCcccc-------------------------
Confidence            99999988888888888889999887   79999999999999999876532110                         


Q ss_pred             EEEEeCCceeeeecCCC--CCcEEEEccCCC-EEEEEcCCCcEEEEEcCCCccCcceeec----CCcCeeEEEECCCCCE
Q psy15995        506 ISIVENGAKVSSLPIDY--EPSSISLDHEHG-LVAVGGADSKVHIYELNNKSLSPKAELD----HLGPVTDCSFSPSNEY  578 (683)
Q Consensus       506 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~  578 (683)
                      +.        ..-++..  +|..+.+.+.|- .|++|+.||.|++||++...........    ..+..+++..+++...
T Consensus      1247 v~--------~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapi 1318 (1387)
T KOG1517|consen 1247 VC--------VYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPI 1318 (1387)
T ss_pred             ce--------eecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCe
Confidence            00        0111222  267777777554 5999999999999999885322222221    2346999999999999


Q ss_pred             EEEEeCCCeEEEEECCCCcccccc----ceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCc
Q psy15995        579 LVASDAHRKVVLYRVPDFELAHNK----EWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPA  641 (683)
Q Consensus       579 l~~~~~d~~i~i~~~~~~~~~~~~----~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~  641 (683)
                      +|+|+. +.|+||++...++-...    ..+...+.+.|++|+|---+||+|+.|.+|.||....+.
T Consensus      1319 iAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1319 IASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred             eeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCcC
Confidence            999998 99999999764442211    111134668999999999999999999999999987654

>KOG2110|consensus

Probab=99.81  E-value=1.7e-16  Score=137.54  Aligned_cols=321  Identities=14%  Similarity=0.085  Sum_probs=220.0

Q ss_pred             CeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccc
Q psy15995         46 QPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      .+....|..|...|..|....-.+|+.+..............|..+-||..---|+...+-+.+++.+.+.+..+..+.+
T Consensus         7 ti~~~~~Nqd~~~lsvGs~~Gyk~~~~~~~~k~~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~f   86 (391)
T KOG2110|consen    7 TINFIGFNQDSTLLSVGSKDGYKIFSCSPFEKCFSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTICEIFF   86 (391)
T ss_pred             ceeeeeeccceeEEEccCCCceeEEecCchHHhhcccCCCeEEEEeecccceeEEEecCCCceEEEEEcccCceEEEEec
Confidence            45566689999999999877888888876655333333445677777887643333343335699999999888877766


Q ss_pred             ccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeecccc-ccCCCeeEEEEcCCCCeEEEEe
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFH-PIGGPIKDIAWSPDNQRMVVVG  204 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~  204 (683)
                      .               ..|.++.+..  ++|+++-++. |.|||+.+.+.+..+... ++...+.++++++.+.+++.-+
T Consensus        87 p---------------t~IL~VrmNr--~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~  148 (391)
T KOG2110|consen   87 P---------------TSILAVRMNR--KRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPG  148 (391)
T ss_pred             C---------------CceEEEEEcc--ceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecC
Confidence            5               5666666654  4565555443 999999999887666654 4556688888888888999987


Q ss_pred             cCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCe-EEEEcCCCCceeeecccc--ccCeEEEEEC
Q psy15995        205 EGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNT-IAVFEGPPFKFKMTKQEH--SRFVQAVRYS  281 (683)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-i~iw~~~~~~~~~~~~~~--~~~v~~~~~~  281 (683)
                      .....-+.+|+..+-+.+..+..|.+.+.+++|+++|.. |+++++.|+ |||+.+++++.+..++.-  ...|.+++|+
T Consensus       149 s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~l-lATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs  227 (391)
T KOG2110|consen  149 STTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTL-LATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFS  227 (391)
T ss_pred             CCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCE-EEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEEC
Confidence            766666899999999999999999999999999999995 999999997 589999999999888743  3468899999


Q ss_pred             CCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcce
Q psy15995        282 PSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVE  361 (683)
Q Consensus       282 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  361 (683)
                      |++++|++.+..++|++|.++... ......+....+ ..-.++   +.+.+---.+.-.+||.+..-...++.......
T Consensus       228 ~ds~~L~~sS~TeTVHiFKL~~~~-~~~~~~p~~~~~-~~~~~s---k~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~  302 (391)
T KOG2110|consen  228 PDSQFLAASSNTETVHIFKLEKVS-NNPPESPTAGTS-WFGKVS---KAATSYLPSQVSSVLDQSRKFATAKLPESGRKN  302 (391)
T ss_pred             CCCCeEEEecCCCeEEEEEecccc-cCCCCCCCCCCc-ccchhh---hhhhhhcchhhhhhhhhccceeEEEccCCCccc
Confidence            999999999999999999987654 111110000000 000010   001110001112234444322222222222223


Q ss_pred             eceEEEEecCCEEEEEecCCcEEEEecCC
Q psy15995        362 DQQVSCLWQGDYLLTVSLSGFISYLDVNN  390 (683)
Q Consensus       362 ~~~~~~~~~~~~l~~~~~~g~i~~~~~~~  390 (683)
                      ...+...+...++.+++.+|.++.|.+..
T Consensus       303 ~~~l~~~~~~~~v~vas~dG~~y~y~l~~  331 (391)
T KOG2110|consen  303 ICSLSSIQKIPRVLVASYDGHLYSYRLPP  331 (391)
T ss_pred             eEEeeccCCCCEEEEEEcCCeEEEEEcCC
Confidence            33333345788999999999999998875

>KOG0771|consensus

Probab=99.80  E-value=3e-18  Score=151.23  Aligned_cols=205  Identities=20%  Similarity=0.307  Sum_probs=153.9

Q ss_pred             EEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEE
Q psy15995         89 NVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIW  168 (683)
Q Consensus        89 ~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw  168 (683)
                      .+++|+.||..|++++.||++|||++.+...+.....|.              ..|.++.|+|||++|++-+.| ..+||
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~--------------~eV~DL~FS~dgk~lasig~d-~~~VW  212 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHH--------------AEVKDLDFSPDGKFLASIGAD-SARVW  212 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhc--------------CccccceeCCCCcEEEEecCC-ceEEE
Confidence            789999999999999999999999988877666655554              789999999999999999999 99999


Q ss_pred             eccccceeeeccccccCCCeeEEEEcCCC---CeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEE
Q psy15995        169 DTVNKEHILKNEFHPIGGPIKDIAWSPDN---QRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRI  245 (683)
Q Consensus       169 d~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  245 (683)
                      +.+++..+........+.....+.|+.|+   .+.+++...+                                .+.  +
T Consensus       213 ~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~--------------------------------~~~--v  258 (398)
T KOG0771|consen  213 SVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFP--------------------------------GGG--V  258 (398)
T ss_pred             EeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCC--------------------------------CCc--e
Confidence            99999666555544444556677777765   2222221111                                000  1


Q ss_pred             EEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEc
Q psy15995        246 ITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWK  325 (683)
Q Consensus       246 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~  325 (683)
                      ..    ..+.+|+-...-...........|++++.+++|++++.|+.||.|.+++..+.+.++..+ ..|...|+.+.|+
T Consensus       259 ~~----~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk-~aH~~~VT~ltF~  333 (398)
T KOG0771|consen  259 RL----CDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVK-EAHLGFVTGLTFS  333 (398)
T ss_pred             eE----EEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeeh-hhheeeeeeEEEc
Confidence            11    123444432111111122234569999999999999999999999999999988887776 4699999999999


Q ss_pred             cCCCEEEEEECCCcEEEEECCC
Q psy15995        326 PDGTQLLTASGDKTCKLWDIET  347 (683)
Q Consensus       326 ~~~~~l~~~~~dg~i~iwd~~~  347 (683)
                      ||.+++++.+.+....+..+.-
T Consensus       334 Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  334 PDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             CCcCcccccccCCceeEEEEee
Confidence            9999999999998888887764

>KOG0649|consensus

Probab=99.80  E-value=2.5e-17  Score=133.87  Aligned_cols=245  Identities=14%  Similarity=0.183  Sum_probs=179.5

Q ss_pred             cEEEEEEeCCCCEEEEEeCCCcEEEEcCCC---------CCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCC
Q psy15995        404 PITALALSPDRGTVFTGSHDGFITRWNAKT---------GENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSS  474 (683)
Q Consensus       404 ~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~  474 (683)
                      .|.+-+++|.+++|+.|..+|.|.+..+.+         ++......+.|..++..+.+..+.|++++. |.|+-|..+.
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~~Lls~gd-G~V~gw~W~E   90 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDDFLLSGGD-GLVYGWEWNE   90 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeehhheeeccC-ceEEEeeehh
Confidence            455667899999999999999999998754         222333337899999999999988888875 9999998765


Q ss_pred             CcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeee-ecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCC
Q psy15995        475 NAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSS-LPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNK  553 (683)
Q Consensus       475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~  553 (683)
                      ........+                        .++-..+... .-.-.+|+++.+.|..+-++.++.|+.++-||++++
T Consensus        91 ~~es~~~K~------------------------lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G  146 (325)
T KOG0649|consen   91 EEESLATKR------------------------LWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDG  146 (325)
T ss_pred             hhhhccchh------------------------hhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCC
Confidence            432100000                        0000000000 111236889999999888888889999999999999


Q ss_pred             ccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeee--------cccEEEEEecCCCCeEEE
Q psy15995        554 SLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFH--------SAKVNCVAWSPDSALVAS  625 (683)
Q Consensus       554 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h--------~~~v~~~~~s~d~~~l~~  625 (683)
                      ++. +...+|.+.|.++.--.....+++|++||++++||.++++.+...+...|        ...|-+++-  +..+|++
T Consensus       147 ~i~-r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvC  223 (325)
T KOG0649|consen  147 RIQ-REYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVC  223 (325)
T ss_pred             EEE-EEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec--cCceEEe
Confidence            987 45558999999999866667888999999999999999887654432212        233566665  4558888


Q ss_pred             eecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEccCCeEEEeeCCCcEEEEeec
Q psy15995        626 GSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       626 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~v~vw~~~  681 (683)
                      |+ .-.+.+|+++..++...++.   .+++..+.|.++ .++++|..+.|.-|.+.
T Consensus       224 Gg-Gp~lslwhLrsse~t~vfpi---pa~v~~v~F~~d-~vl~~G~g~~v~~~~l~  274 (325)
T KOG0649|consen  224 GG-GPKLSLWHLRSSESTCVFPI---PARVHLVDFVDD-CVLIGGEGNHVQSYTLN  274 (325)
T ss_pred             cC-CCceeEEeccCCCceEEEec---ccceeEeeeecc-eEEEeccccceeeeeec
Confidence            76 45699999999999988876   467888888766 66777777888888764

>KOG0644|consensus

Probab=99.79  E-value=8.3e-19  Score=167.42  Aligned_cols=280  Identities=16%  Similarity=0.170  Sum_probs=214.4

Q ss_pred             cCCCeEEEeeCCCCCeEEEec-CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccc
Q psy15995         43 QRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHIL  121 (683)
Q Consensus        43 ~~~~~~~~~~s~~~~~l~~~~-~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~  121 (683)
                      +++.+.|+.|...|+++++++ +..+.||..++..++..+.||++.|+.++.+.+..++|+++.|..|++|.+.++..+.
T Consensus       189 H~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvs  268 (1113)
T KOG0644|consen  189 HRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVS  268 (1113)
T ss_pred             hhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHH
Confidence            567789999999999999995 5689999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeee-cccc-ccCCCeeEEEEcCCCCe
Q psy15995        122 KNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILK-NEFH-PIGGPIKDIAWSPDNQR  199 (683)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~-~~~~~i~~~~~s~~~~~  199 (683)
                      .+..|.              ..|++++|+|-.    +.+.||++++||..-.-.+.. .... ....-+.++.|...+..
T Consensus       269 vLrght--------------gavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~  330 (1113)
T KOG0644|consen  269 VLRGHT--------------GAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDR  330 (1113)
T ss_pred             HHhccc--------------cceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccc
Confidence            998887              889999999965    788899999999871110000 0000 11234556666666666


Q ss_pred             EEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEE
Q psy15995        200 MVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVR  279 (683)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~  279 (683)
                      .++++.+.....+  .      ...+..+...+.-+.++.+-....+++-.+-.+.+|++.++...+.+.+|...+..+.
T Consensus       331 f~Tgs~d~ea~n~--e------~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd  402 (1113)
T KOG0644|consen  331 FLTGSRDGEARNH--E------FEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLD  402 (1113)
T ss_pred             cccccCCcccccc--h------hhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeee
Confidence            6665554322111  0      1111222333333333333333466677788899999999999999999999999999


Q ss_pred             ECCCCCE-EEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCce
Q psy15995        280 YSPSGSH-FASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSV  350 (683)
Q Consensus       280 ~~~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  350 (683)
                      ++|-... ..+++.||...|||+-.|..++....  ....+..-+|++||..++....-|.+.|.....++.
T Consensus       403 ~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~--gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~s  472 (1113)
T KOG0644|consen  403 VHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFI--GHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQSKS  472 (1113)
T ss_pred             ecCCCcHhhhhccCCCceEeeecccCCcceeeec--ccceeeccccCCCCceEecCCCCCceEEeccCCCcc
Confidence            9997664 45788999999999999988877764  356777889999999999988889999987765543

>KOG1240|consensus

Probab=99.79  E-value=2.4e-17  Score=164.42  Aligned_cols=357  Identities=15%  Similarity=0.172  Sum_probs=220.9

Q ss_pred             CCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC-------ceeeeccccccCeEEEEECCCCCEEEEE
Q psy15995        218 TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF-------KFKMTKQEHSRFVQAVRYSPSGSHFASA  290 (683)
Q Consensus       218 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~  290 (683)
                      .|..+..+..|...+..++.++....++++|+.||+|++|+.+..       +...++......+.++...+.++.+|++
T Consensus      1037 ~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~ 1116 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVS 1116 (1431)
T ss_pred             cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEE
Confidence            467778888999999999998887446999999999999996532       2233334456789999999999999999


Q ss_pred             cCCCcEEEEeCCCCe-------eEEeccCCccccCeEEE-EEcc-CCC-EEEEEECCCcEEEEECCCCceeeEEEecCcc
Q psy15995        291 GFDGKVFLYDGASAD-------LVSELGNPAHKGGVYAV-AWKP-DGT-QLLTASGDKTCKLWDIETKSVVSEFIMGNQV  360 (683)
Q Consensus       291 ~~dg~i~iw~~~~~~-------~~~~~~~~~~~~~i~~~-~~~~-~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  360 (683)
                      +.||.|++.++.-.+       ........ ..+.+.++ +|.. ... .++.+...+.+..||++......+.+     
T Consensus      1117 t~DG~v~~~~id~~~~~~~~~~~~ri~n~~-~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk----- 1190 (1431)
T KOG1240|consen 1117 TKDGSVRVLRIDHYNVSKRVATQVRIPNLK-KDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLK----- 1190 (1431)
T ss_pred             cCCCeEEEEEccccccccceeeeeeccccc-CCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhh-----
Confidence            999999999876521       11111111 22223332 3322 222 56666667777777776654433221     


Q ss_pred             eeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceec
Q psy15995        361 EDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       361 ~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~  440 (683)
                                                           .....+.|++++.+|.+++++.|...|.+.+||++-+..+...
T Consensus      1191 -------------------------------------~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw 1233 (1431)
T KOG1240|consen 1191 -------------------------------------NQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSW 1233 (1431)
T ss_pred             -------------------------------------cCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecc
Confidence                                                 1223578999999999999999999999999999999988888


Q ss_pred             cCCCCcceeEEEEe---C--CeEEEEE--cCCeEEEEeCCCCcccCCceecCCCCce-eeecCCeEEEEEeceEEEEeCC
Q psy15995        441 GAGHGNQINGMKAT---G--ELLYTCG--IDDTIKQVDLSSNAYSGPEVKLGSQPRG-LDIDENTLVTVTVKQISIVENG  512 (683)
Q Consensus       441 ~~~~~~~v~~~~~~---~--~~l~~~~--~d~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  512 (683)
                      ..++..++..+..+   +  ...++++  ..+.+.+|++.++............+.- ...+.                 
T Consensus      1234 ~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps----------------- 1296 (1431)
T KOG1240|consen 1234 EHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPS----------------- 1296 (1431)
T ss_pred             cCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhccc-----------------
Confidence            77777888887776   3  4555554  4788999999987432221111011100 00000                 


Q ss_pred             ceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeE-EEE
Q psy15995        513 AKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKV-VLY  591 (683)
Q Consensus       513 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i-~i~  591 (683)
                      . ....+........++...+..+.+|+.|..|+.||............+..........+.+ ..++.++.--.. .+.
T Consensus      1297 ~-~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~-~~~i~~~~~i~e~i~~ 1374 (1431)
T KOG1240|consen 1297 N-DARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYD-LSTIPGSQFIDEFIIY 1374 (1431)
T ss_pred             c-cCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhcc-ccccCCCccchhhhhh
Confidence            0 0001222233445566667899999999999999998766542121122112222222211 111211110000 000


Q ss_pred             EC-----------CCCccccccceeeecccEEEEEecCC-CCeEEEeecCCcEEEEe
Q psy15995        592 RV-----------PDFELAHNKEWGFHSAKVNCVAWSPD-SALVASGSLDTTIIIWS  636 (683)
Q Consensus       592 ~~-----------~~~~~~~~~~~~~h~~~v~~~~~s~d-~~~l~~~~~d~~v~iw~  636 (683)
                      ..           ..-.........+|..+|++|++... ..+|++++.||.|++|.
T Consensus      1375 ~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1375 QQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred             hhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence            00           00011111223348899999998654 46899999999999994

>KOG0642|consensus

Probab=99.79  E-value=2.2e-18  Score=157.47  Aligned_cols=256  Identities=18%  Similarity=0.298  Sum_probs=183.6

Q ss_pred             cccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcc
Q psy15995        315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTP  394 (683)
Q Consensus       315 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~  394 (683)
                      |...|..++|.|-...|++++.||.+++|+++....-..                                    ...++
T Consensus       293 ~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~------------------------------------~~~ep  336 (577)
T KOG0642|consen  293 HDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAE------------------------------------KDVEP  336 (577)
T ss_pred             chhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccc------------------------------------cceee
Confidence            888899999999999999999999999999943111000                                    01356


Q ss_pred             eeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCC---------cceeccCCCCcceeEEEEe--CCeEEEEEc
Q psy15995        395 IRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE---------NDRVQGAGHGNQINGMKAT--GELLYTCGI  463 (683)
Q Consensus       395 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~---------~~~~~~~~~~~~v~~~~~~--~~~l~~~~~  463 (683)
                      +.++.+|.++|.|+++.+++..+++|+.||+|+.|++....         .......+|...+..+.++  .+.|++++.
T Consensus       337 i~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~  416 (577)
T KOG0642|consen  337 ILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSS  416 (577)
T ss_pred             eEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecC
Confidence            67889999999999999999999999999999999765221         2223346899999999888  788999999


Q ss_pred             CCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCC-CEEEEEcCC
Q psy15995        464 DDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEH-GLVAVGGAD  542 (683)
Q Consensus       464 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d  542 (683)
                      ||+++.|+.............                                   ...-+.++.+-... ...+   .+
T Consensus       417 DgTvr~w~~~~~~~~~f~~~~-----------------------------------e~g~Plsvd~~ss~~a~~~---~s  458 (577)
T KOG0642|consen  417 DGTVRLWEPTEESPCTFGEPK-----------------------------------EHGYPLSVDRTSSRPAHSL---AS  458 (577)
T ss_pred             CceEEeeccCCcCccccCCcc-----------------------------------ccCCcceEeeccchhHhhh---hh
Confidence            999999998765431000000                                   00112222222211 1111   12


Q ss_pred             CcEEEEEcCCCccCcceee---------cCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEE
Q psy15995        543 SKVHIYELNNKSLSPKAEL---------DHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNC  613 (683)
Q Consensus       543 g~i~i~d~~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~  613 (683)
                      .....+++..........+         .....+..+...|.+.+.+++..|+.|+++|..++++++....  |...+++
T Consensus       459 ~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a--~~~svts  536 (577)
T KOG0642|consen  459 FRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVA--HKDSVTS  536 (577)
T ss_pred             cccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheee--ccceecc
Confidence            2233333332222111111         0224567788899999999999999999999999999876554  9999999


Q ss_pred             EEecCCCCeEEEeecCCcEEEEeCCCCceeeEe
Q psy15995        614 VAWSPDSALVASGSLDTTIIIWSLASPAKHIII  646 (683)
Q Consensus       614 ~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~  646 (683)
                      +++.|+|.+|++++.|+.+++|.+....+....
T Consensus       537 lai~~ng~~l~s~s~d~sv~l~kld~k~~~~es  569 (577)
T KOG0642|consen  537 LAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLES  569 (577)
T ss_pred             eeecCCCceEEeecCCceeehhhccchheeecc
Confidence            999999999999999999999999887766544

>KOG0290|consensus

Probab=99.79  E-value=8.7e-17  Score=134.43  Aligned_cols=274  Identities=15%  Similarity=0.258  Sum_probs=189.1

Q ss_pred             CCeeEEEEcC--C-CCeEEEEecCCc--eEEEEEEcc--CCCceee-eecCCcCeEEEEeecCCC----eEEEEeeCCCe
Q psy15995        186 GPIKDIAWSP--D-NQRMVVVGEGRE--RFGHVFMSE--TGTSVGE-ISGQSKPINSCDFKPSRP----FRIITGSEDNT  253 (683)
Q Consensus       186 ~~i~~~~~s~--~-~~~l~~~~~~~~--~~~~~~~~~--~~~~~~~-~~~~~~~v~~~~~~~~~~----~~l~~~~~d~~  253 (683)
                      -++.++.|+.  + ..++++++-..+  ..+.+...+  +++.+.. -..|..+++.+.|.|+..    .+|+++  +..
T Consensus        45 ~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs--~D~  122 (364)
T KOG0290|consen   45 WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATS--SDF  122 (364)
T ss_pred             CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhcc--cCe
Confidence            5678888883  3 345666553222  123333322  3333322 247899999999999863    234443  357


Q ss_pred             EEEEcCCCCceee----e-----ccccccCeEEEEECC-CCCEEEEEcCCCcEEEEeCCCCee---EEeccCCccccCeE
Q psy15995        254 IAVFEGPPFKFKM----T-----KQEHSRFVQAVRYSP-SGSHFASAGFDGKVFLYDGASADL---VSELGNPAHKGGVY  320 (683)
Q Consensus       254 i~iw~~~~~~~~~----~-----~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~~~~~i~  320 (683)
                      +++|.+...+...    .     -..+..++++..|+. +-+++.+.+-|-+..+||++++..   ...+  .+|...|.
T Consensus       123 LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQL--IAHDKEV~  200 (364)
T KOG0290|consen  123 LRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQL--IAHDKEVY  200 (364)
T ss_pred             EEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEE--EecCccee
Confidence            9999876322111    1     124667899999987 455888999999999999998732   2233  35999999


Q ss_pred             EEEEccCC-CEEEEEECCCcEEEEECCCCceeeEEEecCcceec--eEEEEe-cCCEEEEEecC-CcEEEEecCCCCcce
Q psy15995        321 AVAWKPDG-TQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQ--QVSCLW-QGDYLLTVSLS-GFISYLDVNNPSTPI  395 (683)
Q Consensus       321 ~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~l~~~~~~-g~i~~~~~~~~~~~~  395 (683)
                      .++|...+ +.|++++.||.++++|++..+....+.........  .++..+ +.+++++...+ ..|.+.|++.+..++
T Consensus       201 DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpv  280 (364)
T KOG0290|consen  201 DIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPV  280 (364)
T ss_pred             EEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcce
Confidence            99999854 47899999999999999987765544433332333  333333 44566665554 579999999999999


Q ss_pred             eeeeeccccEEEEEEeCC-CCEEEEEeCCCcEEEEcCCCCCcce----eccCCCCcceeEEEEe---CCeEEEEEc
Q psy15995        396 RVIKGHNKPITALALSPD-RGTVFTGSHDGFITRWNAKTGENDR----VQGAGHGNQINGMKAT---GELLYTCGI  463 (683)
Q Consensus       396 ~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~w~~~~~~~~~----~~~~~~~~~v~~~~~~---~~~l~~~~~  463 (683)
                      ..+++|...|++++|.|. ...+.+++.|..+.+||+.+.....    ...-.....|..+.|.   ++.++.+..
T Consensus       281 a~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~~~  356 (364)
T KOG0290|consen  281 ARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIAICFG  356 (364)
T ss_pred             ehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEEEEec
Confidence            999999999999999995 5789999999999999998654311    1112356788888887   677766653

>KOG1240|consensus

Probab=99.79  E-value=4.4e-17  Score=162.59  Aligned_cols=293  Identities=16%  Similarity=0.175  Sum_probs=190.4

Q ss_pred             CCcccccccCcccceEEEEECCCC-cEEEEecCCCCEEEEeCCCcccccccccccCCCCccccee-eeeecceeeeEeec
Q psy15995         74 NPAISDIYTEHSCAVNVAKYSPSG-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGT-LLSLTSIRNILVLS  151 (683)
Q Consensus        74 ~~~~~~~~~~h~~~v~~~~~s~d~-~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~s~  151 (683)
                      .|.++..+..|+..|..++.+++. .+++|||.||+|++||...-..-        ++..+...+ ......+.++...+
T Consensus      1037 ~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~--------~~s~rS~ltys~~~sr~~~vt~~~ 1108 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGE--------GGSARSELTYSPEGSRVEKVTMCG 1108 (1431)
T ss_pred             cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcC--------cceeeeeEEEeccCCceEEEEecc
Confidence            456777888999999999998855 99999999999999998654211        111111111 22447788999999


Q ss_pred             cceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcC
Q psy15995        152 IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKP  231 (683)
Q Consensus       152 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (683)
                      .+..+|+++.||.|++.++...... +.  ......+....  .+|.                                -
T Consensus      1109 ~~~~~Av~t~DG~v~~~~id~~~~~-~~--~~~~~ri~n~~--~~g~--------------------------------v 1151 (1431)
T KOG1240|consen 1109 NGDQFAVSTKDGSVRVLRIDHYNVS-KR--VATQVRIPNLK--KDGV--------------------------------V 1151 (1431)
T ss_pred             CCCeEEEEcCCCeEEEEEccccccc-cc--eeeeeeccccc--CCCc--------------------------------e
Confidence            9999999999999999998652100 00  00000000000  0010                                1


Q ss_pred             eEEEEeecCCC-eEEEEeeCCCeEEEEcCCCCceeeecc--ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy15995        232 INSCDFKPSRP-FRIITGSEDNTIAVFEGPPFKFKMTKQ--EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVS  308 (683)
Q Consensus       232 v~~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~  308 (683)
                      |..-+|..... ..++.+...+.|..||.........++  ...+.|++++.+|.++++++|+..|.+.+||++-+..+.
T Consensus      1152 v~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~ 1231 (1431)
T KOG1240|consen 1152 VSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPIL 1231 (1431)
T ss_pred             EEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceee
Confidence            11122222221 258888888999999987766554443  345789999999999999999999999999999999999


Q ss_pred             eccCCccccCeEEEEEccC---CCEEEEEE--CCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcE
Q psy15995        309 ELGNPAHKGGVYAVAWKPD---GTQLLTAS--GDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFI  383 (683)
Q Consensus       309 ~~~~~~~~~~i~~~~~~~~---~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i  383 (683)
                      ....+. ..+|..+..+|-   ....++++  ..+.+.+|++.++.....+............                 
T Consensus      1232 sw~~P~-~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~----------------- 1293 (1431)
T KOG1240|consen 1232 SWEHPA-RAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYA----------------- 1293 (1431)
T ss_pred             cccCcc-cCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhh-----------------
Confidence            888654 478888887763   24444444  4678999999999766555433111111100                 


Q ss_pred             EEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcc
Q psy15995        384 SYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEND  437 (683)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~  437 (683)
                          ...  .  ..-+.+.-......+...+..+.+|+.|..|+.||....+..
T Consensus      1294 ----~Ps--~--~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~s 1339 (1431)
T KOG1240|consen 1294 ----LPS--N--DARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEIS 1339 (1431)
T ss_pred             ----ccc--c--cCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccc
Confidence                000  0  000112222333344455678899999999999998776544

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.79  E-value=1.9e-17  Score=162.47  Aligned_cols=234  Identities=15%  Similarity=0.173  Sum_probs=162.2

Q ss_pred             CeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCC---CCEEEEeCCCcccccccccccCCCCcccceeeeee
Q psy15995         65 NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDIS---GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSL  141 (683)
Q Consensus        65 ~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (683)
                      ..|.+||.+... .+.+..|...+.+.+|||||++||.++.+   ..|.+||+.+++........               
T Consensus       184 ~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~---------------  247 (429)
T PRK01742        184 YEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFR---------------  247 (429)
T ss_pred             EEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCC---------------
Confidence            589999987665 45577888999999999999999987643   36999999887532111111               


Q ss_pred             cceeeeEeeccceEEEeec-CCccEEEE--eccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccC
Q psy15995        142 TSIRNILVLSIGFYIASGD-ISGKVRIW--DTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSET  218 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~-~d~~i~iw--d~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~  218 (683)
                      .....++|+|||++|+.+. .+|.+.||  |+.+++..   .+..+...+.+..|+|||+.+++++.... ...+|.++.
T Consensus       248 g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~---~lt~~~~~~~~~~wSpDG~~i~f~s~~~g-~~~I~~~~~  323 (429)
T PRK01742        248 GHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPS---QLTSGAGNNTEPSWSPDGQSILFTSDRSG-SPQVYRMSA  323 (429)
T ss_pred             CccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeE---eeccCCCCcCCEEECCCCCEEEEEECCCC-CceEEEEEC
Confidence            1233578999999888764 67776655  66555432   23334566889999999999888764322 246666654


Q ss_pred             C-CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEE
Q psy15995        219 G-TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVF  297 (683)
Q Consensus       219 ~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  297 (683)
                      . .....+ .+..  ....|+|+++. ++..+.++ +.+||+.+++.......+  ....+.|+|+|++|+.++.++...
T Consensus       324 ~~~~~~~l-~~~~--~~~~~SpDG~~-ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~  396 (429)
T PRK01742        324 SGGGASLV-GGRG--YSAQISADGKT-LVMINGDN-VVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGK  396 (429)
T ss_pred             CCCCeEEe-cCCC--CCccCCCCCCE-EEEEcCCC-EEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCce
Confidence            2 222222 3433  46789999996 66666555 556998888755433222  235678999999999999899888


Q ss_pred             EEeC--CCCeeEEeccCCccccCeEEEEEccC
Q psy15995        298 LYDG--ASADLVSELGNPAHKGGVYAVAWKPD  327 (683)
Q Consensus       298 iw~~--~~~~~~~~~~~~~~~~~i~~~~~~~~  327 (683)
                      +|.+  .++.....+..  |.+.+...+|+|-
T Consensus       397 ~l~~~~~~G~~~~~l~~--~~g~~~~p~wsp~  426 (429)
T PRK01742        397 VLQLVSADGRFKARLPG--SDGQVKFPAWSPY  426 (429)
T ss_pred             EEEEEECCCCceEEccC--CCCCCCCcccCCC
Confidence            7765  35777777754  7788889999984

>KOG0644|consensus

Probab=99.78  E-value=6.4e-19  Score=168.18  Aligned_cols=293  Identities=17%  Similarity=0.273  Sum_probs=223.5

Q ss_pred             CCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEE
Q psy15995        219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL  298 (683)
Q Consensus       219 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  298 (683)
                      .+.+..+.+|-..|.|..|...+.+ +++|+.|..++||..++..++....+|.+.|+.++.+.+..++++++.|..|++
T Consensus       180 mk~ikrLlgH~naVyca~fDrtg~~-Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrv  258 (1113)
T KOG0644|consen  180 MKNIKRLLGHRNAVYCAIFDRTGRY-IITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRV  258 (1113)
T ss_pred             HHHHHHHHhhhhheeeeeeccccce-EeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEE
Confidence            3456678899999999999999996 999999999999999999999999999999999999999999999999999999


Q ss_pred             EeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEe
Q psy15995        299 YDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVS  378 (683)
Q Consensus       299 w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  378 (683)
                      |.+.++.++..+..  |.+.|++++|+|-.    +.+.||++++||.+-....  +.                       
T Consensus       259 Wrl~~~~pvsvLrg--htgavtaiafsP~~----sss~dgt~~~wd~r~~~~~--y~-----------------------  307 (1113)
T KOG0644|consen  259 WRLPDGAPVSVLRG--HTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRI--YV-----------------------  307 (1113)
T ss_pred             EecCCCchHHHHhc--cccceeeeccCccc----cCCCCCceEeccccccccc--cC-----------------------
Confidence            99999999999986  99999999999954    6788999999998811110  00                       


Q ss_pred             cCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeE
Q psy15995        379 LSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELL  458 (683)
Q Consensus       379 ~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l  458 (683)
                                   ..+..  ......+.++.|..++..+++++.|+.-..|.+.........                .+
T Consensus       308 -------------prp~~--~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~----------------li  356 (1113)
T KOG0644|consen  308 -------------PRPLK--FTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNL----------------LI  356 (1113)
T ss_pred             -------------CCCCC--cccccceeeeeccccccccccccCCcccccchhhHhhhhccc----------------eE
Confidence                         00000  011245666777778888899999988777765432211100                00


Q ss_pred             EEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEE
Q psy15995        459 YTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAV  538 (683)
Q Consensus       459 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  538 (683)
                      ++.+..                                                                  .-..+.++
T Consensus       357 f~t~ss------------------------------------------------------------------d~~~~~~~  370 (1113)
T KOG0644|consen  357 FVTRSS------------------------------------------------------------------DLSSIVVT  370 (1113)
T ss_pred             EEeccc------------------------------------------------------------------ccccccee
Confidence            000000                                                                  00124445


Q ss_pred             EcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCC-CCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEec
Q psy15995        539 GGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPS-NEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWS  617 (683)
Q Consensus       539 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s  617 (683)
                      +-.+-.+.+|++.++.+. ....+|...+..+.++|- .+...+++.||...|||+-.|..+.....+ | ..+..-+||
T Consensus       371 ar~~~~~~vwnl~~g~l~-H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~g-h-~kl~d~kFS  447 (1113)
T KOG0644|consen  371 ARNDHRLCVWNLYTGQLL-HNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIG-H-GKLVDGKFS  447 (1113)
T ss_pred             eeeeeEeeeeecccchhh-hhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecc-c-ceeeccccC
Confidence            556677899999998876 344578999999999994 455567899999999999998887665543 4 456677999


Q ss_pred             CCCCeEEEeecCCcEEEEeCCCCcee
Q psy15995        618 PDSALVASGSLDTTIIIWSLASPAKH  643 (683)
Q Consensus       618 ~d~~~l~~~~~d~~v~iw~~~~~~~~  643 (683)
                      +||..++....-|.++|.....++..
T Consensus       448 qdgts~~lsd~hgql~i~g~gqs~s~  473 (1113)
T KOG0644|consen  448 QDGTSIALSDDHGQLYILGTGQSKSQ  473 (1113)
T ss_pred             CCCceEecCCCCCceEEeccCCCccc
Confidence            99999999998999999987665544

>KOG2041|consensus

Probab=99.78  E-value=4.5e-15  Score=139.98  Aligned_cols=547  Identities=12%  Similarity=0.150  Sum_probs=344.1

Q ss_pred             CCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCC---------------cccccccCcccceEEEEECCCCcEEEEecCCCC
Q psy15995         45 GQPIVLGGDPKGKNFLYT-NGNSVIIRNIENP---------------AISDIYTEHSCAVNVAKYSPSGFYIASGDISGK  108 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~---------------~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~  108 (683)
                      .+..|++|.....++|.+ .+|.+.|.-+.+.               ....+|.||++.|.-+.|+.+.+.|-|.+.+|.
T Consensus        15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~Gl   94 (1189)
T KOG2041|consen   15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGL   94 (1189)
T ss_pred             ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCce
Confidence            466789999999999987 6888888876542               234568899999999999999999999999999


Q ss_pred             EEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCe
Q psy15995        109 VRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPI  188 (683)
Q Consensus       109 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i  188 (683)
                      |.||-+-.+.......-..            ..+.|.+++|..||+.+...-.||.|.+=.++.. .++...+.+  ...
T Consensus        95 IiVWmlykgsW~EEMiNnR------------nKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGN-RIwgKeLkg--~~l  159 (1189)
T KOG2041|consen   95 IIVWMLYKGSWCEEMINNR------------NKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGN-RIWGKELKG--QLL  159 (1189)
T ss_pred             EEEEeeecccHHHHHhhCc------------CccEEEEEEEcCCCcEEEEEEccCCEEEEeeccc-eecchhcch--hec
Confidence            9999998886544332221            1166899999999999999999999988777654 333333332  345


Q ss_pred             eEEEEcCCCCeEEEEecCCceEEEEEEccCCC-------c-e---eeeecCCcCeEEEEee--------cCCCeEEEEee
Q psy15995        189 KDIAWSPDNQRMVVVGEGRERFGHVFMSETGT-------S-V---GEISGQSKPINSCDFK--------PSRPFRIITGS  249 (683)
Q Consensus       189 ~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~-------~-~---~~~~~~~~~v~~~~~~--------~~~~~~l~~~~  249 (683)
                      ..+.|++|.+.++..-.++.  .++++.+..-       + +   ..+......|..+.|.        |+.+ +++.+.
T Consensus       160 ~hv~ws~D~~~~Lf~~ange--~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP-~lavcy  236 (1189)
T KOG2041|consen  160 AHVLWSEDLEQALFKKANGE--THLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRP-RLAVCY  236 (1189)
T ss_pred             cceeecccHHHHHhhhcCCc--EEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCC-EEEEEE
Confidence            57899999887776655543  4555544210       1 0   0112222335555553        4566 699999


Q ss_pred             CCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCC---------CcEEEEeCCCCeeEEeccCCccccCeE
Q psy15995        250 EDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD---------GKVFLYDGASADLVSELGNPAHKGGVY  320 (683)
Q Consensus       250 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------g~i~iw~~~~~~~~~~~~~~~~~~~i~  320 (683)
                      .+|.+.+...........+. ..-.+....|+++|..|++++.+         +.|.+|. .-|+.+..++.  ....|+
T Consensus       237 ~nGr~QiMR~eND~~Pvv~d-tgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fys-p~G~i~gtlkv--pg~~It  312 (1189)
T KOG2041|consen  237 ANGRMQIMRSENDPEPVVVD-TGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYS-PYGHIVGTLKV--PGSCIT  312 (1189)
T ss_pred             cCceehhhhhcCCCCCeEEe-cccEeecceecCCCcEEEEccCcccccCccccceEEEec-cchhheEEEec--CCceee
Confidence            99999888644333222222 23568899999999999998764         2566665 56777777776  667899


Q ss_pred             EEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEec-----CCcEEEEecCCCCcce
Q psy15995        321 AVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSL-----SGFISYLDVNNPSTPI  395 (683)
Q Consensus       321 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~g~i~~~~~~~~~~~~  395 (683)
                      +++|-..|-.++.+ -|+.|.+=+++..-....+                .+.++....     .-.|.+||..+..+.+
T Consensus       313 ~lsWEg~gLriA~A-vdsfiyfanIRP~ykWgy~----------------e~TvVy~y~~~e~p~y~i~Fwdtk~nek~v  375 (1189)
T KOG2041|consen  313 GLSWEGTGLRIAIA-VDSFIYFANIRPEYKWGYI----------------EETVVYVYQKEELPQYGIMFWDTKTNEKTV  375 (1189)
T ss_pred             eeEEcCCceEEEEE-ecceEEEEeecccceEEEe----------------eeEEEEEEccCCCcceEEEEEecccChhhh
Confidence            99998777666665 4678888777654322211                111111111     1257789988766655


Q ss_pred             eeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC-Cccee------ccCCCCcceeEEEEe----CCeEEEEEcC
Q psy15995        396 RVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG-ENDRV------QGAGHGNQINGMKAT----GELLYTCGID  464 (683)
Q Consensus       396 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~-~~~~~------~~~~~~~~v~~~~~~----~~~l~~~~~d  464 (683)
                      +...    +..++++..+.-.|+.-..||.+.-++.-.. .....      ....-....+.+.+.    +...+...+.
T Consensus       376 K~V~----~~~~~a~~~ehCvL~~~~d~~~i~e~s~le~~~~~~~l~LCNSIGT~lD~kytdirP~Fv~vn~~~vviAS~  451 (1189)
T KOG2041|consen  376 KTVT----HFENMAFYREHCVLINRQDDGVIPEYSTLENRSRVYFLQLCNSIGTSLDYKYTDIRPKFVCVNGICVVIASE  451 (1189)
T ss_pred             hhhc----ceeehheecccEEEEeccccCCCcchhhhhcccceEEEeeecccCCcCCCCcceeeeeEEEecceEEEEecc
Confidence            5443    3456777777777777777887766632111 11100      111122233333322    3444444456


Q ss_pred             CeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCc
Q psy15995        465 DTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSK  544 (683)
Q Consensus       465 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~  544 (683)
                      ..+.+|.....+.............+. +..+.....  ..-...+.+ .........+|.+++.+  .+++.++-..|.
T Consensus       452 e~~~iWhy~~pK~~s~l~~~k~rkegr-~h~Ddtp~g--a~d~~l~ys-~kt~~G~~DpICAl~~s--dk~l~vareSG~  525 (1189)
T KOG2041|consen  452 ERYFIWHYVLPKFNSVLAGVKIRKEGR-FHGDDTPEG--AQDRTLEYS-TKTLLGSKDPICALCIS--DKFLMVARESGG  525 (1189)
T ss_pred             ccEEEEEEeccchhhhhhhhhhccccc-ccCCCCccc--hhhceeecc-ceeeccCCCcceeeeec--ceEEEEEeccCc
Confidence            677888876554332211100000000 000000000  000000111 11122344567777666  568999999999


Q ss_pred             EEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECC---CCccccccceeeecccEEEEEecCCCC
Q psy15995        545 VHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVP---DFELAHNKEWGFHSAKVNCVAWSPDSA  621 (683)
Q Consensus       545 i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~---~~~~~~~~~~~~h~~~v~~~~~s~d~~  621 (683)
                      |.-|.+.+..+.....  -...+.+++..-+...+|.-.--|.+.+.|+.   ++..+.. ........|..+.|..|+.
T Consensus       526 I~rySl~nv~l~n~y~--~n~~~y~~~lNCnstRlAiId~~gv~tf~dLd~d~~g~ql~~-~~~~errDVWd~~Wa~dNp  602 (1189)
T KOG2041|consen  526 IYRYSLNNVVLTNSYP--VNPSIYSIKLNCNSTRLAIIDLVGVVTFQDLDYDFDGDQLKL-IYTSERRDVWDYEWAQDNP  602 (1189)
T ss_pred             eEEEEecceeeeeccc--cCchheeEeeccCcchhhhhhhhceeeeeecccccCcceeee-eehhhhhhhhhhhhccCCc
Confidence            9999998877664443  45678899999999999999989999999887   2222211 2222456799999999887


Q ss_pred             eEEEeecCCcEEEEeCCCCcee
Q psy15995        622 LVASGSLDTTIIIWSLASPAKH  643 (683)
Q Consensus       622 ~l~~~~~d~~v~iw~~~~~~~~  643 (683)
                      .|..--+...++|++=.+++..
T Consensus       603 ~llAlmeKtrmyifrgndpeEp  624 (1189)
T KOG2041|consen  603 NLLALMEKTRMYIFRGNDPEEP  624 (1189)
T ss_pred             hHHhhhhhceEEEecCcCcccc
Confidence            7777666777888886665544

>KOG0771|consensus

Probab=99.78  E-value=3.8e-17  Score=144.32  Aligned_cols=199  Identities=18%  Similarity=0.174  Sum_probs=161.3

Q ss_pred             EEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccC
Q psy15995        233 NSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN  312 (683)
Q Consensus       233 ~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  312 (683)
                      ..++|+.+|.. +++++.||++|+|+.+....+.....|...|.++.|+|||+.|++.+.| ..++|+.+++..+.....
T Consensus       148 k~vaf~~~gs~-latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~  225 (398)
T KOG0771|consen  148 KVVAFNGDGSK-LATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTP  225 (398)
T ss_pred             eEEEEcCCCCE-eeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCC
Confidence            78999999985 9999999999999999998888889999999999999999999999999 899999999987777664


Q ss_pred             CccccCeEEEEEccCC---CE--EEEEECCCcEEEEECCCCce----eeEEEecCcceeceEEEEecCCEEEEEecCCcE
Q psy15995        313 PAHKGGVYAVAWKPDG---TQ--LLTASGDKTCKLWDIETKSV----VSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFI  383 (683)
Q Consensus       313 ~~~~~~i~~~~~~~~~---~~--l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i  383 (683)
                      ...+.....+.|+.|+   .+  ++....-+.++.|++.....    ..............+.++.+|++++.|+.+|.|
T Consensus       226 ~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsV  305 (398)
T KOG0771|consen  226 FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSV  305 (398)
T ss_pred             cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcE
Confidence            4455667788888776   22  23333345677766653322    111122233467788999999999999999999


Q ss_pred             EEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCC
Q psy15995        384 SYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~  433 (683)
                      .+++....+.....-+.|...|+.+.|+||.+++++.+.+....+..+..
T Consensus       306 ai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  306 AIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             EEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            99999887766666778999999999999999999999998888877654

>KOG1587|consensus

Probab=99.78  E-value=1.8e-16  Score=153.23  Aligned_cols=273  Identities=19%  Similarity=0.274  Sum_probs=193.9

Q ss_pred             cEEEEecCCCCcceeeeeeccccEEEEEEeC-CCCEEEEEeCCCcEEEEcCCCCCcc-----eeccCCCCcceeEEEEe-
Q psy15995        382 FISYLDVNNPSTPIRVIKGHNKPITALALSP-DRGTVFTGSHDGFITRWNAKTGEND-----RVQGAGHGNQINGMKAT-  454 (683)
Q Consensus       382 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~w~~~~~~~~-----~~~~~~~~~~v~~~~~~-  454 (683)
                      .+.+|++..+..+...+. -...|++++|+| +..+++.|..+|.|.+||++.+...     ......|..++..+.+. 
T Consensus       223 ~~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~  301 (555)
T KOG1587|consen  223 VLLVWSLKNPNTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQ  301 (555)
T ss_pred             eEEEEecCCCCCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEec
Confidence            788999999866666555 467899999999 5577888999999999999887662     22235688889988887 


Q ss_pred             ---CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEcc
Q psy15995        455 ---GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDH  531 (683)
Q Consensus       455 ---~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  531 (683)
                         +.-+++++.||.|..|+++................                        ..........++++.|.+
T Consensus       302 ~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~------------------------~~~~~~~~~~~t~~~F~~  357 (555)
T KOG1587|consen  302 NEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKH------------------------KGQQSSKAVGATSLKFEP  357 (555)
T ss_pred             cCCCCceEEEecCCcEeeeeccccccchhhcccccccc------------------------cccccccccceeeEeecc
Confidence               45699999999999998775543222221111110                        001111233567777776


Q ss_pred             C-CCEEEEEcCCCcEEEEEcCCCccCc-------ceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECC-CCcccccc
Q psy15995        532 E-HGLVAVGGADSKVHIYELNNKSLSP-------KAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVP-DFELAHNK  602 (683)
Q Consensus       532 ~-~~~l~~~~~dg~i~i~d~~~~~~~~-------~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~-~~~~~~~~  602 (683)
                      . -..+++|+++|.|.--+..+.+...       .....|.++|.++.++|=+..++..+.|-+++||... ....+...
T Consensus       358 ~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~  437 (555)
T KOG1587|consen  358 TDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSL  437 (555)
T ss_pred             CCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhh
Confidence            4 4568899999988875544433322       1223488999999999976666555559999999987 44444333


Q ss_pred             ceeeecccEEEEEecCCC-CeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEee
Q psy15995        603 EWGFHSAKVNCVAWSPDS-ALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       603 ~~~~h~~~v~~~~~s~d~-~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~  680 (683)
                      ..  +...+++++|||-. ..++++..||.+.+||+............-+....+.+.|+ +++.|+.|...|.+.+|++
T Consensus       438 ~~--~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l  515 (555)
T KOG1587|consen  438 DS--SPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKL  515 (555)
T ss_pred             hh--ccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEc
Confidence            32  67779999999964 56778888999999999776554443322235667788888 4889999999999999998


Q ss_pred             c
Q psy15995        681 A  681 (683)
Q Consensus       681 ~  681 (683)
                      .
T Consensus       516 ~  516 (555)
T KOG1587|consen  516 S  516 (555)
T ss_pred             C
Confidence            5

>KOG1523|consensus

Probab=99.78  E-value=2.9e-17  Score=139.37  Aligned_cols=249  Identities=17%  Similarity=0.210  Sum_probs=181.2

Q ss_pred             CCCeeEEEEcCCCCeEEEEecCCceEEEEEEccC---CCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcC-C
Q psy15995        185 GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSET---GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG-P  260 (683)
Q Consensus       185 ~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~-~  260 (683)
                      ..+|++.+|++|.+.++++..+.+  +.++.+..   -+..+++..|...|+.++|+|..+ +|++++.|..-++|.. .
T Consensus        10 ~~pitchAwn~drt~iAv~~~~~e--vhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~sn-rIvtcs~drnayVw~~~~   86 (361)
T KOG1523|consen   10 LEPITCHAWNSDRTQIAVSPNNHE--VHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSN-RIVTCSHDRNAYVWTQPS   86 (361)
T ss_pred             cCceeeeeecCCCceEEeccCCce--EEEEEecCCCCceeceehhhhCcceeEEeecCCCC-ceeEccCCCCccccccCC
Confidence            489999999999999999988876  45555543   457888999999999999999998 4999999999999987 3


Q ss_pred             CC--ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeE--EeccCCccccCeEEEEEccCCCEEEEEEC
Q psy15995        261 PF--KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLV--SELGNPAHKGGVYAVAWKPDGTQLLTASG  336 (683)
Q Consensus       261 ~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  336 (683)
                      .+  +....+..++...+++.|+|.++.+|+|+....|.+|-.+..+.-  .......+...|.++.|+|++-+|++|+.
T Consensus        87 ~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~  166 (361)
T KOG1523|consen   87 GGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGST  166 (361)
T ss_pred             CCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceeccccc
Confidence            33  344556778999999999999999999999999999876654322  22222337788999999999999999999


Q ss_pred             CCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCC-CcceeeeeeccccEEEEEEeCCCC
Q psy15995        337 DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP-STPIRVIKGHNKPITALALSPDRG  415 (683)
Q Consensus       337 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~  415 (683)
                      |+..+++..--+..-.. ....                          -|+-+.+ +..+..+....+.+..+.|+|+|.
T Consensus       167 D~k~rVfSayIK~Vdek-pap~--------------------------pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~  219 (361)
T KOG1523|consen  167 DGKCRVFSAYIKGVDEK-PAPT--------------------------PWGSKMPFGQLMSEASSSGGWVHGVLFSPSGN  219 (361)
T ss_pred             CcceeEEEEeeeccccC-CCCC--------------------------CCccCCcHHHHHHhhccCCCceeeeEeCCCCC
Confidence            99999997542211100 0000                          0110000 122233334567899999999999


Q ss_pred             EEEEEeCCCcEEEEcCCCCCc-ceeccCCCCcceeEEEEe-CCeEEEEEcC
Q psy15995        416 TVFTGSHDGFITRWNAKTGEN-DRVQGAGHGNQINGMKAT-GELLYTCGID  464 (683)
Q Consensus       416 ~l~~~~~dg~i~~w~~~~~~~-~~~~~~~~~~~v~~~~~~-~~~l~~~~~d  464 (683)
                      .|+-.+.|+.+.+-|...... .......+ -+..++.+- .+.++.++.|
T Consensus       220 ~lawv~Hds~v~~~da~~p~~~v~~~~~~~-lP~ls~~~ise~~vv~ag~~  269 (361)
T KOG1523|consen  220 RLAWVGHDSTVSFVDAAGPSERVQSVATAQ-LPLLSVSWISENSVVAAGYD  269 (361)
T ss_pred             EeeEecCCCceEEeecCCCchhccchhhcc-CCceeeEeecCCceeecCCC
Confidence            999999999999999876653 22222222 555555554 5556666655

>KOG0974|consensus

Probab=99.77  E-value=1.8e-14  Score=142.24  Aligned_cols=261  Identities=16%  Similarity=0.097  Sum_probs=181.3

Q ss_pred             CeEEEecCCeEEEEeCCCCccccccc------Ccc--cceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccC
Q psy15995         57 KNFLYTNGNSVIIRNIENPAISDIYT------EHS--CAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPI  128 (683)
Q Consensus        57 ~~l~~~~~~~i~v~~~~~~~~~~~~~------~h~--~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~  128 (683)
                      .||.++.+..|.+||+..+.++..+.      .|.  +.+.     -.+-+++++..-+.+..=+...+.. ..+.    
T Consensus        18 ~~llag~gp~i~~yd~~s~~li~~~~~~~~~~~H~~e~~~~-----l~~~~~v~~~~~~~v~~~~~~~~~~-~~~s----   87 (967)
T KOG0974|consen   18 DYLLAGSGPEILVYDLSSGCLIRHLIQSKILEVHRGEGKVK-----LLSGKIVTCAKSDEVYVKEASNQII-ERFS----   87 (967)
T ss_pred             ceeeecCCCceEEeeCCchhHhhhhhhhcccccccccccce-----eccceEEEEEeecceeecchhhhhh-hhcc----
Confidence            78999999999999999987665433      340  0000     1233455555444443322222110 0000    


Q ss_pred             CCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccC--CCeeEEEEcCCCCeEEEEecC
Q psy15995        129 GGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIG--GPIKDIAWSPDNQRMVVVGEG  206 (683)
Q Consensus       129 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~i~~~~~s~~~~~l~~~~~~  206 (683)
                                   ..+..-.+..+...++.++.++.+.+||...+....+..-....  ....-+.++++.-+++++...
T Consensus        88 -------------~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~  154 (967)
T KOG0974|consen   88 -------------DWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVF  154 (967)
T ss_pred             -------------ccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEecccc
Confidence                         23333455666778899999999999999887644332211100  112223455565566665554


Q ss_pred             CceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceee-eccccccCeEEEEECCCCC
Q psy15995        207 RERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM-TKQEHSRFVQAVRYSPSGS  285 (683)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~  285 (683)
                      +.  +.+|.+...+.-..+.+|.+.|..+.++.+|.+ +++.++|.++++|++++.+... ..-+|+..|..+.|.|+  
T Consensus       155 ~~--iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~-i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--  229 (967)
T KOG0974|consen  155 GE--IIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRY-IASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--  229 (967)
T ss_pred             cc--EEEEeccccCCcceecccCCceEEEEEccCCcE-EEEEecCcceeeeecccccccCcccccccceeEEEEeccc--
Confidence            43  567777633333368999999999999999996 9999999999999999988777 66789999999999999  


Q ss_pred             EEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCC
Q psy15995        286 HFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIET  347 (683)
Q Consensus       286 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  347 (683)
                      .+++++.|-+.++|+.+ +..+..+.. .....|..++..++....++++.|+.+++|++..
T Consensus       230 ~i~t~gedctcrvW~~~-~~~l~~y~~-h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~  289 (967)
T KOG0974|consen  230 RIITVGEDCTCRVWGVN-GTQLEVYDE-HSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG  289 (967)
T ss_pred             eeEEeccceEEEEEecc-cceehhhhh-hhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence            89999999999999754 444445543 2346789999999999999999999999999853

>KOG2111|consensus

Probab=99.77  E-value=6.1e-15  Score=125.44  Aligned_cols=239  Identities=21%  Similarity=0.344  Sum_probs=171.4

Q ss_pred             eEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEE-eecC-----
Q psy15995         88 VNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIA-SGDI-----  161 (683)
Q Consensus        88 v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~-----  161 (683)
                      ...++|+.|...++.|.++| .+||+.+--+...+......+            ..+..+.|-.  ++|| +|+.     
T Consensus         8 ~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G------------~~~veMLfR~--N~laLVGGg~~pky   72 (346)
T KOG2111|consen    8 TLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGG------------FKIVEMLFRS--NYLALVGGGSRPKY   72 (346)
T ss_pred             eeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCc------------hhhhhHhhhh--ceEEEecCCCCCCC
Confidence            34599999999999988776 999998764433333333211            1122222221  2333 2333     


Q ss_pred             -CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc-CCCceeeeecCCcCeEEEEeec
Q psy15995        162 -SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE-TGTSVGEISGQSKPINSCDFKP  239 (683)
Q Consensus       162 -d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~  239 (683)
                       .+.|.|||-...+++....+.   .+|.++.+.++  .++++-.+.   +.+|... .-+.++.+.....+=--++..|
T Consensus        73 ~pNkviIWDD~k~~~i~el~f~---~~I~~V~l~r~--riVvvl~~~---I~VytF~~n~k~l~~~et~~NPkGlC~~~~  144 (346)
T KOG2111|consen   73 PPNKVIIWDDLKERCIIELSFN---SEIKAVKLRRD--RIVVVLENK---IYVYTFPDNPKLLHVIETRSNPKGLCSLCP  144 (346)
T ss_pred             CCceEEEEecccCcEEEEEEec---cceeeEEEcCC--eEEEEecCe---EEEEEcCCChhheeeeecccCCCceEeecC
Confidence             257999997777776666665   89999999876  566665553   6777766 4566666655443322444444


Q ss_pred             C--CCeEEEEeeCCCeEEEEcCCCCce--eeeccccccCeEEEEECCCCCEEEEEcCCCc-EEEEeCCCCeeEEeccCCc
Q psy15995        240 S--RPFRIITGSEDNTIAVFEGPPFKF--KMTKQEHSRFVQAVRYSPSGSHFASAGFDGK-VFLYDGASADLVSELGNPA  314 (683)
Q Consensus       240 ~--~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iw~~~~~~~~~~~~~~~  314 (683)
                      .  ...+..=|-.-|.|+|-|+...+.  ...+..|...|.|++.+.+|..+|+++..|+ |+|||..+|+.+.+++.-.
T Consensus       145 ~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~  224 (346)
T KOG2111|consen  145 TSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGV  224 (346)
T ss_pred             CCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCC
Confidence            3  332222355679999999876665  4677899999999999999999999999997 7999999999999998655


Q ss_pred             cccCeEEEEEccCCCEEEEEECCCcEEEEECCCCc
Q psy15995        315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       315 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      ....|.+++|+|+..+|++++..|++.++.++...
T Consensus       225 d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~  259 (346)
T KOG2111|consen  225 DRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTE  259 (346)
T ss_pred             chheEEEEEeCCCccEEEEEcCCCeEEEEEeecCC
Confidence            67889999999999999999999999999987644

>KOG0290|consensus

Probab=99.76  E-value=1.6e-16  Score=132.88  Aligned_cols=242  Identities=16%  Similarity=0.190  Sum_probs=175.8

Q ss_pred             cccCCCeEEEeeCCCCC----eEEEecCCeEEEEeCCC--Ccc--cccc-----cCcccceEEEEECC-CCcEEEEecCC
Q psy15995         41 RTQRGQPIVLGGDPKGK----NFLYTNGNSVIIRNIEN--PAI--SDIY-----TEHSCAVNVAKYSP-SGFYIASGDIS  106 (683)
Q Consensus        41 ~~~~~~~~~~~~s~~~~----~l~~~~~~~i~v~~~~~--~~~--~~~~-----~~h~~~v~~~~~s~-d~~~las~~~d  106 (683)
                      ..++-.++.+.|.||.+    -|.+.++..+++|.+..  .+.  ...|     ..+.+++++..|+. |-++|.+.+-|
T Consensus        93 fd~~YP~tK~~wiPd~~g~~pdlLATs~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiD  172 (364)
T KOG0290|consen   93 FDHPYPVTKLMWIPDSKGVYPDLLATSSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSID  172 (364)
T ss_pred             CCCCCCccceEecCCccccCcchhhcccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeeccc
Confidence            34555677888988874    24455666999999874  221  1112     24678999999998 77899999999


Q ss_pred             CCEEEEeCCCccc---ccccccccCCCCcccceeeeeecceeeeEeeccce-EEEeecCCccEEEEeccccceee-eccc
Q psy15995        107 GKVRIWDTVNKEH---ILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF-YIASGDISGKVRIWDTVNKEHIL-KNEF  181 (683)
Q Consensus       107 g~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~d~~i~iwd~~~~~~~~-~~~~  181 (683)
                      -+..|||++++..   ...              -+.|...|..++|...+. .+|+.+.||++|++|+...+.-. .++-
T Consensus       173 TTCTiWdie~~~~~~vkTQ--------------LIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~  238 (364)
T KOG0290|consen  173 TTCTIWDIETGVSGTVKTQ--------------LIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYED  238 (364)
T ss_pred             CeEEEEEEeeccccceeeE--------------EEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecC
Confidence            9999999998721   111              233347899999999664 88999999999999998865432 2222


Q ss_pred             cccCCCeeEEEEcCC-CCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC
Q psy15995        182 HPIGGPIKDIAWSPD-NQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP  260 (683)
Q Consensus       182 ~~~~~~i~~~~~s~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~  260 (683)
                      +....+...++|++. -+++|+...+....+.+-......++.++++|...|+.++|.|.....+++++.|..+.+||++
T Consensus       239 p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~  318 (364)
T KOG0290|consen  239 PSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQ  318 (364)
T ss_pred             CCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecc
Confidence            222567888999985 4667776666555433333446789999999999999999999998889999999999999987


Q ss_pred             CCce------eeeccccccCeEEEEECCC-CCEEEEEcCCCcEEE
Q psy15995        261 PFKF------KMTKQEHSRFVQAVRYSPS-GSHFASAGFDGKVFL  298 (683)
Q Consensus       261 ~~~~------~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i  298 (683)
                      ..-.      +.... -.++|..+.|++. ..+++.+. +.++.+
T Consensus       319 q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~-~kklei  361 (364)
T KOG0290|consen  319 QMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAICF-GKKLEI  361 (364)
T ss_pred             cccccCCCCchhhhh-ccceeeeeeecccCCCEEEEEe-cCeeeE
Confidence            5432      11222 4678999999964 55787776 344443

>KOG1523|consensus

Probab=99.76  E-value=1.4e-16  Score=135.28  Aligned_cols=234  Identities=18%  Similarity=0.239  Sum_probs=178.3

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc---cccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE---HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD  160 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  160 (683)
                      -.++|+|.||++|+..+|.+-....|.|+......   ...+++.|.              ..++.+.|+|....|++++
T Consensus         9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd--------------~~vtgvdWap~snrIvtcs   74 (361)
T KOG1523|consen    9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHD--------------KIVTGVDWAPKSNRIVTCS   74 (361)
T ss_pred             ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhC--------------cceeEEeecCCCCceeEcc
Confidence            45799999999999999999999999999987665   333333343              6789999999999999999


Q ss_pred             CCccEEEEec-cccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCc----eeeeecCCcCeEEE
Q psy15995        161 ISGKVRIWDT-VNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTS----VGEISGQSKPINSC  235 (683)
Q Consensus       161 ~d~~i~iwd~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~  235 (683)
                      .|..-++|.. ..++-.....+..+....+++.|+|.++.++++++.+.  +.|+..+....    .+.-+.+...|+++
T Consensus        75 ~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~--isVcy~E~ENdWWVsKhikkPirStv~sl  152 (361)
T KOG1523|consen   75 HDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARL--ISVCYYEQENDWWVSKHIKKPIRSTVTSL  152 (361)
T ss_pred             CCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccE--EEEEEEecccceehhhhhCCccccceeee
Confidence            9999999999 55655555556667789999999999999999988765  45555543322    22334567789999


Q ss_pred             EeecCCCeEEEEeeCCCeEEEEcC------------------CCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEE
Q psy15995        236 DFKPSRPFRIITGSEDNTIAVFEG------------------PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVF  297 (683)
Q Consensus       236 ~~~~~~~~~l~~~~~d~~i~iw~~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  297 (683)
                      +|+|++-. +++|+.|+..+++..                  +-+++...+....+.+..+.|+|+|..|+-.+.|..+.
T Consensus       153 dWhpnnVL-laaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~  231 (361)
T KOG1523|consen  153 DWHPNNVL-LAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVS  231 (361)
T ss_pred             eccCCcce-ecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceE
Confidence            99999984 999999999999952                  11233334445678899999999999999999999999


Q ss_pred             EEeCCCCe-eEEeccCCccccCeEEEEEccCCCEEEEEECC
Q psy15995        298 LYDGASAD-LVSELGNPAHKGGVYAVAWKPDGTQLLTASGD  337 (683)
Q Consensus       298 iw~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  337 (683)
                      +-|..... .+.....  ..-+..++.|-.+.. ++.++.|
T Consensus       232 ~~da~~p~~~v~~~~~--~~lP~ls~~~ise~~-vv~ag~~  269 (361)
T KOG1523|consen  232 FVDAAGPSERVQSVAT--AQLPLLSVSWISENS-VVAAGYD  269 (361)
T ss_pred             EeecCCCchhccchhh--ccCCceeeEeecCCc-eeecCCC
Confidence            99976654 3444433  336778888876544 4444454

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.75  E-value=1.2e-16  Score=156.82  Aligned_cols=213  Identities=13%  Similarity=0.078  Sum_probs=146.2

Q ss_pred             CCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC---ccEEEEeccccceeeecccc
Q psy15995        106 SGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS---GKVRIWDTVNKEHILKNEFH  182 (683)
Q Consensus       106 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~  182 (683)
                      +..|.+||...... ..+..+.              ..+....|+|||+.|+..+.+   ..|++||+.+++......+.
T Consensus       183 ~~~i~i~d~dg~~~-~~lt~~~--------------~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~  247 (429)
T PRK01742        183 PYEVRVADYDGFNQ-FIVNRSS--------------QPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFR  247 (429)
T ss_pred             eEEEEEECCCCCCc-eEeccCC--------------CccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCC
Confidence            46899999866542 2222222              567889999999999987643   46999999887643333232


Q ss_pred             ccCCCeeEEEEcCCCCeEEEEec-CCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC
Q psy15995        183 PIGGPIKDIAWSPDNQRMVVVGE-GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP  261 (683)
Q Consensus       183 ~~~~~i~~~~~s~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~  261 (683)
                         +....++|+|||+.|+++.. ++...+++++.+.+ ....+..+...+....|+|+++.+++++..++...+|+++.
T Consensus       248 ---g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~-~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~  323 (429)
T PRK01742        248 ---GHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGG-TPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSA  323 (429)
T ss_pred             ---CccCceeECCCCCEEEEEEecCCcEEEEEEECCCC-CeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEEC
Confidence               34457899999999988764 33322333344444 45566777778889999999997555666778888887643


Q ss_pred             Cc-eeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcE
Q psy15995        262 FK-FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTC  340 (683)
Q Consensus       262 ~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i  340 (683)
                      .. ....+ .+..  ....|+|+|+.|+..+.++ +.+||+.+++.......  .  ....+.|+||+++++.++.++..
T Consensus       324 ~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~--~--~~~~~~~sPdG~~i~~~s~~g~~  395 (429)
T PRK01742        324 SGGGASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSST--F--LDESPSISPNGIMIIYSSTQGLG  395 (429)
T ss_pred             CCCCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCC--C--CCCCceECCCCCEEEEEEcCCCc
Confidence            22 12222 3333  4578999999998887654 66699988876543321  1  23567899999999999999888


Q ss_pred             EEEEC
Q psy15995        341 KLWDI  345 (683)
Q Consensus       341 ~iwd~  345 (683)
                      .+|++
T Consensus       396 ~~l~~  400 (429)
T PRK01742        396 KVLQL  400 (429)
T ss_pred             eEEEE
Confidence            88775

>KOG2139|consensus

Probab=99.74  E-value=2.3e-15  Score=130.09  Aligned_cols=280  Identities=13%  Similarity=0.102  Sum_probs=179.6

Q ss_pred             eecccceeecCCCcccCCCeEEEeeCCCCC-eEEEecCCeEEEEeCCCCcc--------------cccccCcccceEEEE
Q psy15995         28 YTNGNKYIFATLPRTQRGQPIVLGGDPKGK-NFLYTNGNSVIIRNIENPAI--------------SDIYTEHSCAVNVAK   92 (683)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~~~i~v~~~~~~~~--------------~~~~~~h~~~v~~~~   92 (683)
                      .+.........+.......+++++|-|.+. .|+.++.+-|.+|.....-.              +....|| .+|++++
T Consensus       124 iy~ksst~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmq  202 (445)
T KOG2139|consen  124 IYDKSSTCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQ  202 (445)
T ss_pred             EeccCCCCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEE
Confidence            333333555555565667899999998654 58888889999998753211              1123356 6899999


Q ss_pred             ECCCCcEEEEec-CCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEecc
Q psy15995         93 YSPSGFYIASGD-ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTV  171 (683)
Q Consensus        93 ~s~d~~~las~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~  171 (683)
                      |.+||..|++++ .|..|.|||..++..+.-.....              ..+.-+.|||||.+|.++.-|+..++|+..
T Consensus       203 wn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~gl--------------gg~slLkwSPdgd~lfaAt~davfrlw~e~  268 (445)
T KOG2139|consen  203 WNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGL--------------GGFSLLKWSPDGDVLFAATCDAVFRLWQEN  268 (445)
T ss_pred             EcCCCCEEeecccCcceEEEEcCCCCCcccccccCC--------------CceeeEEEcCCCCEEEEecccceeeeehhc
Confidence            999999999987 45679999999986654332222              668889999999999999999999999654


Q ss_pred             ccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCC
Q psy15995        172 NKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSED  251 (683)
Q Consensus       172 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  251 (683)
                      ...-.  ....-..+.|..-+|+|+|++|+.+..+...                      +.++.|........-.++..
T Consensus       269 q~wt~--erw~lgsgrvqtacWspcGsfLLf~~sgsp~----------------------lysl~f~~~~~~~~~~~~~k  324 (445)
T KOG2139|consen  269 QSWTK--ERWILGSGRVQTACWSPCGSFLLFACSGSPR----------------------LYSLTFDGEDSVFLRPQSIK  324 (445)
T ss_pred             cccee--cceeccCCceeeeeecCCCCEEEEEEcCCce----------------------EEEEeecCCCccccCcccce
Confidence            43211  1222234699999999999999888766432                      44455544433111122222


Q ss_pred             CeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCC--------cEEEEeCCCCeeEEecc-CCccccCeEEE
Q psy15995        252 NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDG--------KVFLYDGASADLVSELG-NPAHKGGVYAV  322 (683)
Q Consensus       252 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------~i~iw~~~~~~~~~~~~-~~~~~~~i~~~  322 (683)
                      ...-+-|++.-.......--.+++.+++|.|.|++||+.-..+        .|.+||.+....+.... ..........+
T Consensus       325 ~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~I  404 (445)
T KOG2139|consen  325 RVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYI  404 (445)
T ss_pred             eeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceE
Confidence            3333334332211111112356789999999999999876433        46778766544333221 00122224566


Q ss_pred             EEcc---CCCEEEEEECCCcEEEEECC
Q psy15995        323 AWKP---DGTQLLTASGDKTCKLWDIE  346 (683)
Q Consensus       323 ~~~~---~~~~l~~~~~dg~i~iwd~~  346 (683)
                      +|.|   ++.+|..+=..|.+.-|++.
T Consensus       405 sF~pl~n~g~lLsiaWsTGriq~ypl~  431 (445)
T KOG2139|consen  405 SFGPLKNEGRLLSIAWSTGRIQRYPLT  431 (445)
T ss_pred             EeeecccCCcEEEEEeccCceEeeeeE
Confidence            6766   56667777667777777654

>KOG1334|consensus

Probab=99.74  E-value=5e-17  Score=145.87  Aligned_cols=300  Identities=17%  Similarity=0.264  Sum_probs=211.8

Q ss_pred             ccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeec--cce
Q psy15995         77 ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS--IGF  154 (683)
Q Consensus        77 ~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~  154 (683)
                      +...|.+|.+.|+.+.|...|..|++|+.|.+|.+||+..+.....+...-             ...|-.-.|.|  +.+
T Consensus       134 l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH-------------~~NvfQaKFiP~s~d~  200 (559)
T KOG1334|consen  134 LQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGH-------------CNNVFQAKFIPFSGDR  200 (559)
T ss_pred             hhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCccccccccc-------------ccchhhhhccCCCCCc
Confidence            345577999999999999999999999999999999999998776654321             13344444666  456


Q ss_pred             EEEeecCCccEEEEeccc-cceeeeccccccCCCeeEEEEcCCCCeEEE-EecCCceEEEEEEccCCCcee---eeecCC
Q psy15995        155 YIASGDISGKVRIWDTVN-KEHILKNEFHPIGGPIKDIAWSPDNQRMVV-VGEGRERFGHVFMSETGTSVG---EISGQS  229 (683)
Q Consensus       155 ~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~  229 (683)
                      .+++++.||.+++=.+.. +.......+..|.++|..++.-|+..+-+. ++++.  .+.-++...+.+..   .-..+.
T Consensus       201 ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~--~v~~~Dlr~~~pa~~~~cr~~~~  278 (559)
T KOG1334|consen  201 TIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDA--VVFHIDLRQDVPAEKFVCREADE  278 (559)
T ss_pred             CceeccccCceeeeeeccccceecceecccccCccceeeecCCCCCccccccccc--ceeeeeeccCCccceeeeeccCC
Confidence            899999999999987654 333335667788999999999998755444 44442  23333444333222   222233


Q ss_pred             c---CeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee------eecc------ccccCeEEEEECCCCCEEEEEcCCC
Q psy15995        230 K---PINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK------MTKQ------EHSRFVQAVRYSPSGSHFASAGFDG  294 (683)
Q Consensus       230 ~---~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~------~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg  294 (683)
                      .   ....++..|...+.+++++.|..+++||.+.....      ..+.      .....|++++|+.++.-|++...|-
T Consensus       279 ~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe  358 (559)
T KOG1334|consen  279 KERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDE  358 (559)
T ss_pred             ccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeeccc
Confidence            3   56789999999988999999999999996543322      1111      2345699999998887777777788


Q ss_pred             cEEEEeCCCCe------------eEEe-ccCCccccCeEEEEE-ccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcc
Q psy15995        295 KVFLYDGASAD------------LVSE-LGNPAHKGGVYAVAW-KPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQV  360 (683)
Q Consensus       295 ~i~iw~~~~~~------------~~~~-~~~~~~~~~i~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  360 (683)
                      .|+++.-.-+.            .+.. ++.......|..+-| -|...++++|+.-|.|.||+-.+++.++        
T Consensus       359 ~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~--------  430 (559)
T KOG1334|consen  359 DIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIR--------  430 (559)
T ss_pred             ceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHH--------
Confidence            89999533221            1112 222112334677765 5678889999888999999887776543        


Q ss_pred             eeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCC
Q psy15995        361 EDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE  435 (683)
Q Consensus       361 ~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~  435 (683)
                                                          .+.+...-|+|+.-+|--..||+.+-|..|+||...+.+
T Consensus       431 ------------------------------------~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~e  469 (559)
T KOG1334|consen  431 ------------------------------------FMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTAE  469 (559)
T ss_pred             ------------------------------------HhhcccceEeccCCCCCCchhhccCCccceeeecCCccc
Confidence                                                334444478999999999999999999999999875544

>KOG1334|consensus

Probab=99.74  E-value=6.4e-17  Score=145.19  Aligned_cols=312  Identities=16%  Similarity=0.246  Sum_probs=227.9

Q ss_pred             ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc--CCCEEEEEECCCcE
Q psy15995        263 KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP--DGTQLLTASGDKTC  340 (683)
Q Consensus       263 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i  340 (683)
                      .....+..|.+.|..+.|+..|..|++++.|..|.+||...+.....+.. +|...|....|.|  +.+.+++++.||.+
T Consensus       133 ~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~S-GH~~NvfQaKFiP~s~d~ti~~~s~dgqv  211 (559)
T KOG1334|consen  133 RLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFES-GHCNNVFQAKFIPFSGDRTIVTSSRDGQV  211 (559)
T ss_pred             hhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCccccccc-ccccchhhhhccCCCCCcCceeccccCce
Confidence            34556778999999999999999999999999999999999988877763 6888998888988  45679999999999


Q ss_pred             EEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC-CEEEE
Q psy15995        341 KLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR-GTVFT  419 (683)
Q Consensus       341 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~  419 (683)
                      ++=.+.....+.                                         ....+..|.++|..++.-|+. ..|.+
T Consensus       212 r~s~i~~t~~~e-----------------------------------------~t~rl~~h~g~vhklav~p~sp~~f~S  250 (559)
T KOG1334|consen  212 RVSEILETGYVE-----------------------------------------NTKRLAPHEGPVHKLAVEPDSPKPFLS  250 (559)
T ss_pred             eeeeecccccee-----------------------------------------cceecccccCccceeeecCCCCCcccc
Confidence            887654332211                                         123345689999999999966 56779


Q ss_pred             EeCCCcEEEEcCCCCCcceecc--CCCCc---ceeEEEEe---CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCcee
Q psy15995        420 GSHDGFITRWNAKTGENDRVQG--AGHGN---QINGMKAT---GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGL  491 (683)
Q Consensus       420 ~~~dg~i~~w~~~~~~~~~~~~--~~~~~---~v~~~~~~---~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~  491 (683)
                      ++.|+.+.-+|++++.......  ..+..   ....++.+   ...+++++.|..+++||.+.-........+..     
T Consensus       251 ~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~-----  325 (559)
T KOG1334|consen  251 CGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDK-----  325 (559)
T ss_pred             cccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhh-----
Confidence            9999999999998876544332  22222   44555555   56899999999999999875432211000000     


Q ss_pred             eecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCc------------cCcce
Q psy15995        492 DIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKS------------LSPKA  559 (683)
Q Consensus       492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------------~~~~~  559 (683)
                       +.+.                ..+ . .....|++++++.++.-|.+.-.|-.|+++.-..+.            ..++.
T Consensus       326 -f~p~----------------hl~-~-d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~v  386 (559)
T KOG1334|consen  326 -FCPH----------------HLV-E-DDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRV  386 (559)
T ss_pred             -cCCc----------------ccc-c-cCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchh
Confidence             0000                000 0 234568999999888888888888889999543221            12222


Q ss_pred             eecCCc--CeeEEE-ECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEe
Q psy15995        560 ELDHLG--PVTDCS-FSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWS  636 (683)
Q Consensus       560 ~~~~~~--~v~~~~-~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~  636 (683)
                      ..+|..  .|..+- |-|...|+++|+.-|.|.||+-.+++++...+..  ..-|+||.-+|--..||+.+-|..|+||-
T Consensus       387 YKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegD--r~VVNCLEpHP~~PvLAsSGid~DVKIWT  464 (559)
T KOG1334|consen  387 YKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGD--RHVVNCLEPHPHLPVLASSGIDHDVKIWT  464 (559)
T ss_pred             hcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcc--cceEeccCCCCCCchhhccCCccceeeec
Confidence            334433  355554 5788999999999999999999999998766654  33899999999999999999999999999


Q ss_pred             CCCCce
Q psy15995        637 LASPAK  642 (683)
Q Consensus       637 ~~~~~~  642 (683)
                      ..+.+.
T Consensus       465 P~~~er  470 (559)
T KOG1334|consen  465 PLTAER  470 (559)
T ss_pred             CCcccc
Confidence            755443

>KOG2394|consensus

Probab=99.74  E-value=4.3e-16  Score=141.73  Aligned_cols=216  Identities=17%  Similarity=0.241  Sum_probs=154.7

Q ss_pred             eCCCCEEEEEeCCCcEEEEcCCCCCcceecc---CCCCcceeEEEEe---CCeEEEEEcCCeEEEEeCCCCcccCCceec
Q psy15995        411 SPDRGTVFTGSHDGFITRWNAKTGENDRVQG---AGHGNQINGMKAT---GELLYTCGIDDTIKQVDLSSNAYSGPEVKL  484 (683)
Q Consensus       411 ~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~---~~~~~~v~~~~~~---~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~  484 (683)
                      .|.+--++.|-..|.|.+.|....+..+.+.   ......++++.|-   ...++.+-.+|.+.++|..-..-       
T Consensus       182 ~~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~-------  254 (636)
T KOG2394|consen  182 TPKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCG-------  254 (636)
T ss_pred             CCCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeecccccc-------
Confidence            4566678888889999999987644333221   2345788999987   66788888999999998632110       


Q ss_pred             CCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCC
Q psy15995        485 GSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHL  564 (683)
Q Consensus       485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  564 (683)
                                                           ....+....+++..+++...-+.      .+..++.+..+ ..
T Consensus       255 -------------------------------------~t~p~~~~~k~~~~f~i~t~ksk------~~rNPv~~w~~-~~  290 (636)
T KOG2394|consen  255 -------------------------------------ATAPSYQALKDGDQFAILTSKSK------KTRNPVARWHI-GE  290 (636)
T ss_pred             -------------------------------------CCCCcccccCCCCeeEEeeeecc------ccCCccceeEe-cc
Confidence                                                 00111222234444433221110      11122223333 34


Q ss_pred             cCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceee
Q psy15995        565 GPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHI  644 (683)
Q Consensus       565 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~  644 (683)
                      +.|...+|||||++||+.+.||.++|||..+.+++....-  .-+...|++|||||++|++|++|..|.||.+...+.+.
T Consensus       291 g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkS--YFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVA  368 (636)
T KOG2394|consen  291 GSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKS--YFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVA  368 (636)
T ss_pred             ccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHh--hccceEEEEEcCCccEEEecCCcceEEEEEeccceEEE
Confidence            5899999999999999999999999999999888755433  45779999999999999999999999999999888777


Q ss_pred             EeecCCCCCCeeEEEEc-------------------------------------------------cCCeEEEeeCCCcE
Q psy15995        645 IIKNAHPQSQITRLQWL-------------------------------------------------DNDLLVSVGQDCNT  675 (683)
Q Consensus       645 ~~~~~~~~~~v~~l~~~-------------------------------------------------~~~~l~s~~~d~~v  675 (683)
                      +-..  |.+.|..++|.                                                 ..-++-++|.|..+
T Consensus       369 RGqG--HkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~~~~~v~YRfGSVGqDTql  446 (636)
T KOG2394|consen  369 RGQG--HKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFNRINSVTYRFGSVGQDTQL  446 (636)
T ss_pred             eccc--cccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCcccccccccceEEEeecccccceE
Confidence            7655  89999999986                                                 01168899999999


Q ss_pred             EEEeec
Q psy15995        676 KIWEIA  681 (683)
Q Consensus       676 ~vw~~~  681 (683)
                      .+||+.
T Consensus       447 cLWDlt  452 (636)
T KOG2394|consen  447 CLWDLT  452 (636)
T ss_pred             EEEecc
Confidence            999985

>KOG1310|consensus

Probab=99.74  E-value=3.4e-16  Score=142.66  Aligned_cols=217  Identities=18%  Similarity=0.252  Sum_probs=161.5

Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeec-cccccCeEEEEECCC--CCEEEEEcCCCcEE
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK-QEHSRFVQAVRYSPS--GSHFASAGFDGKVF  297 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~  297 (683)
                      ...++.||.+.|+++.|+.+|.+ |++|+.|-.+.|||.-..+.+..+ .+|...|.++.|-|.  .+.+++|..|..|+
T Consensus        42 lE~eL~GH~GCVN~LeWn~dG~l-L~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~  120 (758)
T KOG1310|consen   42 LEAELTGHTGCVNCLEWNADGEL-LASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK  120 (758)
T ss_pred             hhhhhccccceecceeecCCCCE-EeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence            45678999999999999999996 999999999999998877777766 589999999999995  45889999999999


Q ss_pred             EEeCCCC----------eeEEeccCCccccCeEEEEEccCC-CEEEEEECCCcEEEEECCCCceeeEEE---------ec
Q psy15995        298 LYDGASA----------DLVSELGNPAHKGGVYAVAWKPDG-TQLLTASGDKTCKLWDIETKSVVSEFI---------MG  357 (683)
Q Consensus       298 iw~~~~~----------~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~---------~~  357 (683)
                      ++|+...          +......  .|...|..++..|++ ..+.++++||+++-+|++.......-.         ..
T Consensus       121 lfdl~~~~~~~~d~~~~~~~~~~~--cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~  198 (758)
T KOG1310|consen  121 LFDLDSSKEGGMDHGMEETTRCWS--CHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNP  198 (758)
T ss_pred             EEecccccccccccCccchhhhhh--hhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhch
Confidence            9998742          2223333  388999999999988 789999999999999998633211100         11


Q ss_pred             CcceeceEEEEe-cCCEEEEEecCCcEEEEecCCCCc------------c-----eeee-eecc-----------ccEEE
Q psy15995        358 NQVEDQQVSCLW-QGDYLLTVSLSGFISYLDVNNPST------------P-----IRVI-KGHN-----------KPITA  407 (683)
Q Consensus       358 ~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~~~~~~~~------------~-----~~~~-~~~~-----------~~v~~  407 (683)
                      .-....++.++| +..++++|+.+...++||.+...+            +     +..+ .+|.           ..++-
T Consensus       199 ~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~  278 (758)
T KOG1310|consen  199 QLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTY  278 (758)
T ss_pred             hhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEE
Confidence            123445666666 567899999999999999432111            0     1111 1221           12566


Q ss_pred             EEEeCCCCEEEEEeCCCcEEEEcCCCCCcceec
Q psy15995        408 LALSPDRGTVFTGSHDGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       408 ~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~  440 (683)
                      ++|+|+|.-|++.-..-.|+++|+..++.....
T Consensus       279 vtfnpNGtElLvs~~gEhVYlfdvn~~~~~~~y  311 (758)
T KOG1310|consen  279 VTFNPNGTELLVSWGGEHVYLFDVNEDKSPTPY  311 (758)
T ss_pred             EEECCCCcEEEEeeCCeEEEEEeecCCCCceee
Confidence            789999988777666678999999887665443

>KOG2111|consensus

Probab=99.73  E-value=1.4e-14  Score=123.32  Aligned_cols=274  Identities=15%  Similarity=0.211  Sum_probs=192.5

Q ss_pred             cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceec-cCCCCcceeEEEEeCCeEEEEEcC-------CeEEEEeCCCC
Q psy15995        404 PITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQ-GAGHGNQINGMKATGELLYTCGID-------DTIKQVDLSSN  475 (683)
Q Consensus       404 ~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~-~~~~~~~v~~~~~~~~~l~~~~~d-------~~i~~~~~~~~  475 (683)
                      ...+++|+.|..-++++..+| .++|+.+.-+..... .....-.+..+-+..++++..+..       ..+.+|| +..
T Consensus         7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWD-D~k   84 (346)
T KOG2111|consen    7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWD-DLK   84 (346)
T ss_pred             ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEe-ccc
Confidence            345589999999999887666 899988764332111 111223444555556666554432       4799999 334


Q ss_pred             cccCCceecCCCCceeeecCCeEEEEEeceEEEEeCC---ceeeeecCCCCC---cEEEEccCCCEEEEE-cCCCcEEEE
Q psy15995        476 AYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENG---AKVSSLPIDYEP---SSISLDHEHGLVAVG-GADSKVHIY  548 (683)
Q Consensus       476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~l~~~-~~dg~i~i~  548 (683)
                      .....+.........+.+..+.++....+.+.++.-.   +....++....+   .+++-..+..+||.- ..-|.|++-
T Consensus        85 ~~~i~el~f~~~I~~V~l~r~riVvvl~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~  164 (346)
T KOG2111|consen   85 ERCIIELSFNSEIKAVKLRRDRIVVVLENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIV  164 (346)
T ss_pred             CcEEEEEEeccceeeEEEcCCeEEEEecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEE
Confidence            4444556777888899999999999999999988643   445555443323   333333344455543 446899999


Q ss_pred             EcCCCcc-CcceeecCCcCeeEEEECCCCCEEEEEeCCCe-EEEEECCCCccccccceeeecccEEEEEecCCCCeEEEe
Q psy15995        549 ELNNKSL-SPKAELDHLGPVTDCSFSPSNEYLVASDAHRK-VVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASG  626 (683)
Q Consensus       549 d~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~  626 (683)
                      |+...+. .+.....|.+.|.+++++.+|..+|+++..|+ |+|||..+|+.+...+.+.....|.+|+||||+.+||++
T Consensus       165 dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~Lavs  244 (346)
T KOG2111|consen  165 DLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVS  244 (346)
T ss_pred             EhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEE
Confidence            9987766 33455569999999999999999999999997 699999999999887777677889999999999999999


Q ss_pred             ecCCcEEEEeCCCCceeeE-----------e-----------ecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEe
Q psy15995        627 SLDTTIIIWSLASPAKHII-----------I-----------KNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWE  679 (683)
Q Consensus       627 ~~d~~v~iw~~~~~~~~~~-----------~-----------~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~  679 (683)
                      |+-|++.|+.+........           +           +..-..+...-++|- +.+.++..+.||+-.-+.
T Consensus       245 SdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgsy~k~~  320 (346)
T KOG2111|consen  245 SDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQGTQCIIAFGSETNTVIAICADGSYYKFK  320 (346)
T ss_pred             cCCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCCCcEEEEecCCCCeEEEEEeCCcEEEEE
Confidence            9999999999876331111           0           011124566677777 436777778888654433

>KOG2139|consensus

Probab=99.73  E-value=6.9e-15  Score=127.19  Aligned_cols=314  Identities=14%  Similarity=0.143  Sum_probs=187.6

Q ss_pred             CeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccC-cccceEEEEECCCC-cEEEEecCCCCEEEEeCCCcccccc
Q psy15995         46 QPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTE-HSCAVNVAKYSPSG-FYIASGDISGKVRIWDTVNKEHILK  122 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~-h~~~v~~~~~s~d~-~~las~~~dg~i~iwd~~~~~~~~~  122 (683)
                      ....++|++----+|++ .+..|++||-+. .....++. -...|+|++|-|.+ +-|+.|...| |.||.........+
T Consensus       100 dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r  177 (445)
T KOG2139|consen  100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANR  177 (445)
T ss_pred             ceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCccccccc
Confidence            34467788733333333 678999999877 33344543 35689999999954 6777777665 99999764422221


Q ss_pred             cccccCCCCcccceeeeeecceeeeEeeccceEEEeecC-CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEE
Q psy15995        123 NEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI-SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMV  201 (683)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  201 (683)
                      ... ..+.....+-.-..+..|+.+.|.+||..|++++. |..|.|||..++..+.....  ..+.+.-+.||||+.+++
T Consensus       178 ~~~-~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~--glgg~slLkwSPdgd~lf  254 (445)
T KOG2139|consen  178 NIR-MMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPK--GLGGFSLLKWSPDGDVLF  254 (445)
T ss_pred             ccc-cccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccccc--CCCceeeEEEcCCCCEEE
Confidence            100 00011111222233478999999999999998765 57899999999876544422  347889999999999999


Q ss_pred             EEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEEC
Q psy15995        202 VVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYS  281 (683)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~  281 (683)
                      ++..+..  ..+|...............+.|...+|+|.|.++|++.+..-.  +|                   ++.|.
T Consensus       255 aAt~dav--frlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgsp~--ly-------------------sl~f~  311 (445)
T KOG2139|consen  255 AATCDAV--FRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSGSPR--LY-------------------SLTFD  311 (445)
T ss_pred             Eecccce--eeeehhcccceecceeccCCceeeeeecCCCCEEEEEEcCCce--EE-------------------EEeec
Confidence            9887743  5666333222222233344589999999999987777664432  22                   23333


Q ss_pred             CCCCEEE-EEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC--------cEEEEECCCCceee
Q psy15995        282 PSGSHFA-SAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK--------TCKLWDIETKSVVS  352 (683)
Q Consensus       282 ~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------~i~iwd~~~~~~~~  352 (683)
                      .....+. .++......+-|+..-....-.  ..-.+++.+++|.|.|.+|++.-..+        .|.+||.+....+.
T Consensus       312 ~~~~~~~~~~~~k~~lliaDL~e~ti~ag~--~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~ve  389 (445)
T KOG2139|consen  312 GEDSVFLRPQSIKRVLLIADLQEVTICAGQ--RLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVE  389 (445)
T ss_pred             CCCccccCcccceeeeeeccchhhhhhcCc--ccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceE
Confidence            2221111 2222222223333211111000  01456789999999999999876543        36677777554433


Q ss_pred             EEEec--CcceeceEEEEe---cCCEEEEEecCCcEEEEecC
Q psy15995        353 EFIMG--NQVEDQQVSCLW---QGDYLLTVSLSGFISYLDVN  389 (683)
Q Consensus       353 ~~~~~--~~~~~~~~~~~~---~~~~l~~~~~~g~i~~~~~~  389 (683)
                      -...+  .......+++.+   ++..+.++-..|.+..|++.
T Consensus       390 ls~cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl~  431 (445)
T KOG2139|consen  390 LSYCGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRIQRYPLT  431 (445)
T ss_pred             EEecccccCCCCceEEeeecccCCcEEEEEeccCceEeeeeE
Confidence            33211  122234444444   56677777777777777654

>KOG2394|consensus

Probab=99.73  E-value=2e-15  Score=137.42  Aligned_cols=249  Identities=18%  Similarity=0.215  Sum_probs=175.5

Q ss_pred             CCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccc------cccCcccceEEEEE-----CCCCcEEEEecCCCCEEEEe
Q psy15995         45 GQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISD------IYTEHSCAVNVAKY-----SPSGFYIASGDISGKVRIWD  113 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~------~~~~h~~~v~~~~~-----s~d~~~las~~~dg~i~iwd  113 (683)
                      +..+....+-.|.+|++..+..+++|+...+....      .++  ...-+|=+|     .|.+--|..|-.-|.|.+.|
T Consensus       124 g~~~~~~~~~~gd~lcFnvg~~lyv~~~~g~~~~~~pi~k~~y~--gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~id  201 (636)
T KOG2394|consen  124 GIVTNTNQSGKGDRLCFNVGRELYVYSYRGAADLSKPIDKREYK--GTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLID  201 (636)
T ss_pred             cceeeccccCCCCEEEEecCCeEEEEEccCcchhccchhhhccc--CCCCceecccccccCCCCcceEEeeccCceEEec
Confidence            34556667889999999999999999988543221      122  122334444     35666677787888999998


Q ss_pred             CCCcccccccccccCCCCcccceeeeeecceeeeEeeccce-EEEeecCCccEEEEeccccceeeeccccccCCCeeEEE
Q psy15995        114 TVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF-YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIA  192 (683)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~  192 (683)
                      ....+..+.+...          .......++++.|-|.+. .++++-.+|.+.+||.+....          ..-.+-.
T Consensus       202 p~~~~~sklfne~----------r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~----------~t~p~~~  261 (636)
T KOG2394|consen  202 PINFEVSKLFNEE----------RLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCG----------ATAPSYQ  261 (636)
T ss_pred             chhhHHHHhhhhc----------ccccccceEEEEEEeCCCceEEEEEecCceEEeecccccc----------CCCCccc
Confidence            7763322222211          112227799999999554 555667789999998732110          0111112


Q ss_pred             EcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccc
Q psy15995        193 WSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS  272 (683)
Q Consensus       193 ~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~  272 (683)
                      ..+++..+.+....        .-.+..++..+.--.+.|+..+|+|||++ |++.+.||.++|||..+.+++-.++..-
T Consensus       262 ~~k~~~~f~i~t~k--------sk~~rNPv~~w~~~~g~in~f~FS~DG~~-LA~VSqDGfLRvF~fdt~eLlg~mkSYF  332 (636)
T KOG2394|consen  262 ALKDGDQFAILTSK--------SKKTRNPVARWHIGEGSINEFAFSPDGKY-LATVSQDGFLRIFDFDTQELLGVMKSYF  332 (636)
T ss_pred             ccCCCCeeEEeeee--------ccccCCccceeEeccccccceeEcCCCce-EEEEecCceEEEeeccHHHHHHHHHhhc
Confidence            22344444432211        11122455555556668999999999996 9999999999999999998888888888


Q ss_pred             cCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc
Q psy15995        273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP  326 (683)
Q Consensus       273 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~  326 (683)
                      +...|++|||||+++++|++|--|.||.+...+.+..-..  |+..|..++|.|
T Consensus       333 GGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqG--HkSWVs~VaFDp  384 (636)
T KOG2394|consen  333 GGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQG--HKSWVSVVAFDP  384 (636)
T ss_pred             cceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccc--cccceeeEeecc
Confidence            8999999999999999999999999999999999888765  999999999983

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.71  E-value=2.3e-12  Score=116.03  Aligned_cols=508  Identities=16%  Similarity=0.183  Sum_probs=284.8

Q ss_pred             CCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEE-----e--cCCCCEEEEeCCCcccccccccccC
Q psy15995         56 GKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIAS-----G--DISGKVRIWDTVNKEHILKNEFHPI  128 (683)
Q Consensus        56 ~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las-----~--~~dg~i~iwd~~~~~~~~~~~~~~~  128 (683)
                      |..+.+.+...+..+++.+++.++ +..|-+-|+...|+|||+.+|.     +  ...+.+.+.+.+.|+...-.-+.  
T Consensus        50 GD~IiFt~~DdlWe~slk~g~~~r-itS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~Ge~kRiTyfG--  126 (668)
T COG4946          50 GDRIIFTCCDDLWEYSLKDGKPLR-ITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDGEAKRITYFG--  126 (668)
T ss_pred             CcEEEEEechHHHHhhhccCCeeE-EecccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCCcEEEEEEec--
Confidence            566666666677778888888765 6779999999999999999886     2  23345888888888654322221  


Q ss_pred             CCCcccceeeeeecceeeeEeeccceEEEeecCCccE----EEEeccccce-eeeccccccCCCeeEEEEcCCCCeEEEE
Q psy15995        129 GGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKV----RIWDTVNKEH-ILKNEFHPIGGPIKDIAWSPDNQRMVVV  203 (683)
Q Consensus       129 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i----~iwd~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~  203 (683)
                       .           ..-.-.-|.|||..|++...-.-.    .+|.++.... ....    .-++.+.+.+- || .++.+
T Consensus       127 -r-----------~fT~VaG~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~~e~L----nlGpathiv~~-dg-~ivig  188 (668)
T COG4946         127 -R-----------RFTRVAGWIPDGEIIVSTDFHTPFSQWTELYKVNVDGIKTEPL----NLGPATHIVIK-DG-IIVIG  188 (668)
T ss_pred             -c-----------ccceeeccCCCCCEEEEeccCCCcccceeeeEEccCCceeeec----cCCceeeEEEe-CC-EEEEc
Confidence             1           122234588888888876543222    2333322110 0001    11344444443 33 22222


Q ss_pred             ecC----------CceEEEEEEccCCC----ceee-----------------eecCCc--CeEEEEe-------------
Q psy15995        204 GEG----------RERFGHVFMSETGT----SVGE-----------------ISGQSK--PINSCDF-------------  237 (683)
Q Consensus       204 ~~~----------~~~~~~~~~~~~~~----~~~~-----------------~~~~~~--~v~~~~~-------------  237 (683)
                      -..          +.....+|.-..+.    ..-.                 +..|.+  .+.++.+             
T Consensus       189 RntydLP~WK~YkGGtrGklWis~d~g~tFeK~vdl~~~vS~PmIV~~RvYFlsD~eG~GnlYSvdldGkDlrrHTnFtd  268 (668)
T COG4946         189 RNTYDLPHWKGYKGGTRGKLWISSDGGKTFEKFVDLDGNVSSPMIVGERVYFLSDHEGVGNLYSVDLDGKDLRRHTNFTD  268 (668)
T ss_pred             cCcccCcccccccCCccceEEEEecCCcceeeeeecCCCcCCceEEcceEEEEecccCccceEEeccCCchhhhcCCchh
Confidence            110          11113444433221    1111                 222221  2333332             


Q ss_pred             ------ecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc--------cccCeE---EEE-ECC-CCCEEEEEcCCCcEEE
Q psy15995        238 ------KPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE--------HSRFVQ---AVR-YSP-SGSHFASAGFDGKVFL  298 (683)
Q Consensus       238 ------~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~--------~~~~v~---~~~-~~~-~~~~l~~~~~dg~i~i  298 (683)
                            +.+|+.  +.-+..|.|.+||..+.+....--+        ....+.   -+. |++ +|++++..+ .|...+
T Consensus       269 YY~R~~nsDGkr--IvFq~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VS-RGkaFi  345 (668)
T COG4946         269 YYPRNANSDGKR--IVFQNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVS-RGKAFI  345 (668)
T ss_pred             ccccccCCCCcE--EEEecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEe-cCcEEE
Confidence                  344552  3334557899998665443221111        001111   111 232 578888888 478888


Q ss_pred             EeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC-cEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEE
Q psy15995        299 YDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK-TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTV  377 (683)
Q Consensus       299 w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  377 (683)
                      .+...+-.++.-    +.+.|.-..+..+++-++.|..|| .+-++|.++++....  ...-.....+..+++|++++++
T Consensus       346 ~~~~~~~~iqv~----~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~--e~~lg~I~av~vs~dGK~~vva  419 (668)
T COG4946         346 MRPWDGYSIQVG----KKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRI--EKDLGNIEAVKVSPDGKKVVVA  419 (668)
T ss_pred             ECCCCCeeEEcC----CCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEe--eCCccceEEEEEcCCCcEEEEE
Confidence            876666555442    677788888888888999999999 899999998875432  2333456678888999999999


Q ss_pred             ecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCC----cEEEEcCCCCCcceeccCCCCcceeEEEE
Q psy15995        378 SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDG----FITRWNAKTGENDRVQGAGHGNQINGMKA  453 (683)
Q Consensus       378 ~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~~w~~~~~~~~~~~~~~~~~~v~~~~~  453 (683)
                      .....+.++|+.++... ..-+...+-|+.+.|+|+++++|-+--+|    .|+++|+.+++...........-..++..
T Consensus       420 Ndr~el~vididngnv~-~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~  498 (668)
T COG4946         420 NDRFELWVIDIDNGNVR-LIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDP  498 (668)
T ss_pred             cCceEEEEEEecCCCee-EecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCC
Confidence            99999999999985443 22344567899999999999999877665    68999999988766554333333344444


Q ss_pred             eCCeEEEEEc-------CCeEEEEeCCCCcccCCce-ecC-C-------CCceeeecCCeEEEEEeceEEEEeCCceeee
Q psy15995        454 TGELLYTCGI-------DDTIKQVDLSSNAYSGPEV-KLG-S-------QPRGLDIDENTLVTVTVKQISIVENGAKVSS  517 (683)
Q Consensus       454 ~~~~l~~~~~-------d~~i~~~~~~~~~~~~~~~-~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (683)
                      ++++|.--+.       |..+.-+.+..  ...+.. .+. +       .+.......+        ...+  +      
T Consensus       499 d~ryLYfLs~RsLdPs~Drv~fnf~f~~--vskPylv~L~~g~~sP~~q~p~~~~~ea~--------e~dl--e------  560 (668)
T COG4946         499 DGRYLYFLSARSLDPSNDRVIFNFSFQR--VSKPYLVVLGRGYYSPFNQPPDEANSEAG--------EVDL--E------  560 (668)
T ss_pred             CCcEEEEEeccccCCCCCeeEEEEEEee--eccceEEEecCCCCChhhcCchhcCcccc--------ceeh--h------
Confidence            4666554432       22221111111  000000 000 0       0000000000        0000  0      


Q ss_pred             ecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q psy15995        518 LPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFE  597 (683)
Q Consensus       518 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~  597 (683)
                       .....+.-+-+.+..-..+++-.+|+|.++...-...                |   ..++-.+-.-|.+.+||+++.+
T Consensus       561 -~ie~r~eP~pVee~dY~sI~~lk~~killfs~pi~Ge----------------f---s~yy~gq~~kG~l~~ydletkk  620 (668)
T COG4946         561 -GIEDRVEPFPVEEGDYRSIAGLKNGKILLFSYPIHGE----------------F---SQYYWGQPEKGRLEKYDLETKK  620 (668)
T ss_pred             -hhcccccccccCccceeEeeecCCCeEEEEEeeccch----------------h---hhhhcCCCccceEEEEecchhh
Confidence             0000111111122222344555566666655431111                1   1122234467889999998876


Q ss_pred             cccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCC
Q psy15995        598 LAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLAS  639 (683)
Q Consensus       598 ~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~  639 (683)
                      ...      -...+.++..|+|++.+.. -.||.+++++++.
T Consensus       621 ~~e------~k~nvss~rlS~D~s~ilv-k~d~kl~~f~vek  655 (668)
T COG4946         621 VEE------YKDNVSSFRLSSDGSKILV-KLDGKLRLFDVEK  655 (668)
T ss_pred             HHH------HhcccceEEEcCCCCEEEE-EeCCeEEEEeccc
Confidence            643      2356899999999998888 7799999999987

>KOG2321|consensus

Probab=99.71  E-value=7.6e-15  Score=134.83  Aligned_cols=282  Identities=15%  Similarity=0.202  Sum_probs=204.9

Q ss_pred             CcccceEEEEECCCCcEE-EEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC
Q psy15995         83 EHSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI  161 (683)
Q Consensus        83 ~h~~~v~~~~~s~d~~~l-as~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  161 (683)
                      +|...-+.|..||||+|+ |||..-..|++||+.+-.+...-....              ..|.-..++.|-..++.-..
T Consensus        49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDa--------------e~V~feiLsDD~SK~v~L~~  114 (703)
T KOG2321|consen   49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDA--------------EVVDFEILSDDYSKSVFLQN  114 (703)
T ss_pred             CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccc--------------cceeEEEeccchhhheEeec
Confidence            477888999999999987 667788899999998876554433332              34444455555556666666


Q ss_pred             CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCC
Q psy15995        162 SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSR  241 (683)
Q Consensus       162 d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  241 (683)
                      |.+|.+-......  ....++   ..-.+++++.-.--|++++.+.+  ++-++++.|..+..+....+.++++..++..
T Consensus       115 DR~IefHak~G~h--y~~RIP---~~GRDm~y~~~scDly~~gsg~e--vYRlNLEqGrfL~P~~~~~~~lN~v~in~~h  187 (703)
T KOG2321|consen  115 DRTIEFHAKYGRH--YRTRIP---KFGRDMKYHKPSCDLYLVGSGSE--VYRLNLEQGRFLNPFETDSGELNVVSINEEH  187 (703)
T ss_pred             CceeeehhhcCee--eeeecC---cCCccccccCCCccEEEeecCcc--eEEEEccccccccccccccccceeeeecCcc
Confidence            7777665432221  111222   23355666644444444444433  5677788899999999999999999999998


Q ss_pred             CeEEEEeeCCCeEEEEcCCCCceeeecc------cccc-----CeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEec
Q psy15995        242 PFRIITGSEDNTIAVFEGPPFKFKMTKQ------EHSR-----FVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL  310 (683)
Q Consensus       242 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~------~~~~-----~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~  310 (683)
                      .. |++|+.+|.|..||.+....+..+.      .|..     .|+++.|+.+|-.+++|+.+|.+.+||+++.+++..-
T Consensus       188 gL-la~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~k  266 (703)
T KOG2321|consen  188 GL-LACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVK  266 (703)
T ss_pred             ce-EEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeec
Confidence            84 9999999999999987765544432      2333     4999999999999999999999999999998877654


Q ss_pred             cCCccccCeEEEEEccC--CCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEec
Q psy15995        311 GNPAHKGGVYAVAWKPD--GTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDV  388 (683)
Q Consensus       311 ~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~  388 (683)
                      . ....-+|..+.|.+.  .+.+++. ....++|||-.+++....+.....  ...+++.|++..++++..++.+..|-+
T Consensus       267 d-h~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEpt~~--lND~C~~p~sGm~f~Ane~~~m~~yyi  342 (703)
T KOG2321|consen  267 D-HGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEPTSD--LNDFCFVPGSGMFFTANESSKMHTYYI  342 (703)
T ss_pred             c-cCCccceeeecccccCCCceEEec-chHHhhhcccccCCceeeccccCC--cCceeeecCCceEEEecCCCcceeEEc
Confidence            4 224568899999774  3455554 456899999999998777654443  667778889999999999998887776


Q ss_pred             CC
Q psy15995        389 NN  390 (683)
Q Consensus       389 ~~  390 (683)
                      ..
T Consensus       343 P~  344 (703)
T KOG2321|consen  343 PS  344 (703)
T ss_pred             cc
Confidence            54

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.71  E-value=7.9e-15  Score=143.49  Aligned_cols=236  Identities=14%  Similarity=0.123  Sum_probs=159.6

Q ss_pred             eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEec---CCCCEEEEeCCCcccccccccccCCCCcccceeeeeec
Q psy15995         66 SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD---ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLT  142 (683)
Q Consensus        66 ~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (683)
                      .|.++|.+..... .+..+...+.+.+|||||+.||..+   .+..|.+||+.+++........               .
T Consensus       180 ~l~~~d~dg~~~~-~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~---------------~  243 (429)
T PRK03629        180 ELRVSDYDGYNQF-VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP---------------R  243 (429)
T ss_pred             eEEEEcCCCCCCE-EeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCC---------------C
Confidence            7999998876554 3555778899999999999998654   2346999999887532221111               2


Q ss_pred             ceeeeEeeccceEEEee-cCCc--cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCc-eEEEEEEccC
Q psy15995        143 SIRNILVLSIGFYIASG-DISG--KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE-RFGHVFMSET  218 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~~~-~~d~--~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~-~~~~~~~~~~  218 (683)
                      ....+.|+|||+.|+.. +.+|  .|.+||+.+++...   +......+....|+|||+.++..+.... ..++.++.+.
T Consensus       244 ~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~---lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~  320 (429)
T PRK03629        244 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ---VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNING  320 (429)
T ss_pred             CcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE---ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCC
Confidence            23457899999988864 4444  58899998876432   2223356788999999999988876432 2233334444


Q ss_pred             CCceeeeecCCcCeEEEEeecCCCeEEEEeeCC--CeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCc-
Q psy15995        219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSED--NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGK-  295 (683)
Q Consensus       219 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-  295 (683)
                      ++ ...+..+........|+|+++.++++...+  ..|.+||+.+++.......  .......|+|||+.|+.++.++. 
T Consensus       321 g~-~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~Lt~~--~~~~~p~~SpDG~~i~~~s~~~~~  397 (429)
T PRK03629        321 GA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLTDT--FLDETPSIAPNGTMVIYSSSQGMG  397 (429)
T ss_pred             CC-eEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEEeCCC--CCCCCceECCCCCEEEEEEcCCCc
Confidence            43 344444555567889999999744444433  3588899887764432222  22346789999999998887764 


Q ss_pred             --EEEEeCCCCeeEEeccCCccccCeEEEEEcc
Q psy15995        296 --VFLYDGASADLVSELGNPAHKGGVYAVAWKP  326 (683)
Q Consensus       296 --i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~  326 (683)
                        +.++++ ++.....+..  |.+.+...+|+|
T Consensus       398 ~~l~~~~~-~G~~~~~l~~--~~~~~~~p~Wsp  427 (429)
T PRK03629        398 SVLNLVST-DGRFKARLPA--TDGQVKFPAWSP  427 (429)
T ss_pred             eEEEEEEC-CCCCeEECcc--CCCCcCCcccCC
Confidence              677776 4555555543  777888888887

>KOG1272|consensus

Probab=99.71  E-value=8.5e-17  Score=143.48  Aligned_cols=271  Identities=15%  Similarity=0.210  Sum_probs=213.4

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc-CCC
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE-TGT  220 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~-~~~  220 (683)
                      ...-.+.++.+|+.|+.|+..|.|..+|..+++....+...   ..|.++.|-.+.+++|++-..     +++..+ .|.
T Consensus       130 FGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~---Etv~Dv~~LHneq~~AVAQK~-----y~yvYD~~Gt  201 (545)
T KOG1272|consen  130 FGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVM---ETVRDVTFLHNEQFFAVAQKK-----YVYVYDNNGT  201 (545)
T ss_pred             cCCeeeeecCCccEEEecCCccceeeeecccceeeeeeehh---hhhhhhhhhcchHHHHhhhhc-----eEEEecCCCc
Confidence            34567889999999999999999999999999877666554   789999999999999987765     333333 577


Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEe
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD  300 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  300 (683)
                      .++.++.|. .|..+.|.|..- +|++++..|.++--|+.+|+.+..+....+.+..++-+|-+..+-+|...|+|.+|+
T Consensus       202 ElHClk~~~-~v~rLeFLPyHf-LL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWS  279 (545)
T KOG1272|consen  202 ELHCLKRHI-RVARLEFLPYHF-LLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWS  279 (545)
T ss_pred             EEeehhhcC-chhhhcccchhh-eeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecC
Confidence            777777664 588999999875 599999999999999999999999998899999999999998999999999999999


Q ss_pred             CCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecC
Q psy15995        301 GASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS  380 (683)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  380 (683)
                      ....+++..+..  |.++|.++++.++|+++++.+.|..++|||++....+.++...  .....+++  ...-+++.+..
T Consensus       280 P~skePLvKiLc--H~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp--~~a~~ls~--SqkglLA~~~G  353 (545)
T KOG1272|consen  280 PNSKEPLVKILC--HRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTP--HPASNLSL--SQKGLLALSYG  353 (545)
T ss_pred             CCCcchHHHHHh--cCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecC--CCcccccc--ccccceeeecC
Confidence            999998888866  9999999999999999999999999999999988876666542  23333333  34446666777


Q ss_pred             CcEEEEecCCCCc--ceeeeeec--cccEEEEEEeCCCCEEEEEeCCCcEEE
Q psy15995        381 GFISYLDVNNPST--PIRVIKGH--NKPITALALSPDRGTVFTGSHDGFITR  428 (683)
Q Consensus       381 g~i~~~~~~~~~~--~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~~  428 (683)
                      ..+.+|.-.....  ....+-.|  .++|..+.|.|-...|-.|...|.-.+
T Consensus       354 ~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~tsi  405 (545)
T KOG1272|consen  354 DHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGITSI  405 (545)
T ss_pred             CeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCCceeE
Confidence            7888886432211  11111112  347889999997777766655553333

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.70  E-value=6.9e-12  Score=131.99  Aligned_cols=452  Identities=14%  Similarity=0.142  Sum_probs=255.4

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEE----eCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEee
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIW----DTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASG  159 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iw----d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  159 (683)
                      ..+.|.++.|-+|...|+.+..+|.|.+.    +..+...-             .++.  ....|.+++||||+..||..
T Consensus        74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E-------------~VG~--vd~GI~a~~WSPD~Ella~v  138 (928)
T PF04762_consen   74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIE-------------IVGS--VDSGILAASWSPDEELLALV  138 (928)
T ss_pred             CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeE-------------EEEE--EcCcEEEEEECCCcCEEEEE
Confidence            45789999999999999999999999999    44333211             1111  11679999999999999999


Q ss_pred             cCCccEEEEeccccceeeeccccccC---CCeeEEEEcCCCCeEEEEecCCceEEEEEEccC-CCceeeeecCCcCeEEE
Q psy15995        160 DISGKVRIWDTVNKEHILKNEFHPIG---GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSET-GTSVGEISGQSKPINSC  235 (683)
Q Consensus       160 ~~d~~i~iwd~~~~~~~~~~~~~~~~---~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~  235 (683)
                      +.++++.+-+ .+-+.+....+....   ..-.++-|-...+.+=- +.++...-...+... ......+. +.+.-..+
T Consensus       139 T~~~~l~~mt-~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~G-s~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~I  215 (928)
T PF04762_consen  139 TGEGNLLLMT-RDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHG-SAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRI  215 (928)
T ss_pred             eCCCEEEEEe-ccceEEEEeecCccccCCCceeeeccCcccCccCc-chhhhhhhhccCCCCCccccCccc-cCCCceEE
Confidence            9998887764 222333222222111   11122222221111000 000000000000000 00112233 55677889


Q ss_pred             EeecCCCeEEEEeeC---C---CeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC---CCcEEEEeCCCCee
Q psy15995        236 DFKPSRPFRIITGSE---D---NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF---DGKVFLYDGASADL  306 (683)
Q Consensus       236 ~~~~~~~~~l~~~~~---d---~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~~  306 (683)
                      +|-.||.+ +++.+-   .   ..++||+-+ |+...+...-.+--.+++|.|.|+++|+...   ...|.+|. ++|-.
T Consensus       216 SWRGDG~y-FAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLr  292 (928)
T PF04762_consen  216 SWRGDGEY-FAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLR  292 (928)
T ss_pred             EECCCCcE-EEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcE
Confidence            99999997 555543   2   589999954 6655555544455567999999999998765   35688887 56655


Q ss_pred             EEeccCC--ccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEE
Q psy15995        307 VSELGNP--AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFIS  384 (683)
Q Consensus       307 ~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~  384 (683)
                      ...+..+  .....|..++|++|+..|+....|. |.+|-..+...-.+....                           
T Consensus       293 hgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~---------------------------  344 (928)
T PF04762_consen  293 HGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIR---------------------------  344 (928)
T ss_pred             eeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEE---------------------------
Confidence            5555443  3567899999999999999987665 999988776532211100                           


Q ss_pred             EEecCCCCcceeeeeeccccEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEc
Q psy15995        385 YLDVNNPSTPIRVIKGHNKPITALALSPDR-GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGI  463 (683)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~  463 (683)
                                    ......+..+.|+|.. ..|...+.+|.+..++..-..........+..          -.+..-.
T Consensus       345 --------------~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~----------g~vaVID  400 (928)
T PF04762_consen  345 --------------FSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDN----------GTVAVID  400 (928)
T ss_pred             --------------ccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCc----------eEEEEEe
Confidence                          0112223347777743 44666666566655543211110000000111          1111112


Q ss_pred             CCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCC
Q psy15995        464 DDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADS  543 (683)
Q Consensus       464 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg  543 (683)
                      ...+++-.++....+++                                -....+..+.++..++|++++..+++-..||
T Consensus       401 G~~lllTpf~~a~VPPP--------------------------------Ms~~~l~~~~~v~~vaf~~~~~~~avl~~d~  448 (928)
T PF04762_consen  401 GNKLLLTPFRRAVVPPP--------------------------------MSSYELELPSPVNDVAFSPSNSRFAVLTSDG  448 (928)
T ss_pred             CCeEEEecccccCCCch--------------------------------HhceEEcCCCCcEEEEEeCCCCeEEEEECCC
Confidence            22334433333222111                                1123344567899999999998899999999


Q ss_pred             cEEEEEcCCCccC--------cceee---------cCCcCeeEEEECCCCCEEEEEeCC---CeEEEEECCCCcccccc-
Q psy15995        544 KVHIYELNNKSLS--------PKAEL---------DHLGPVTDCSFSPSNEYLVASDAH---RKVVLYRVPDFELAHNK-  602 (683)
Q Consensus       544 ~i~i~d~~~~~~~--------~~~~~---------~~~~~v~~~~~s~~~~~l~~~~~d---~~i~i~~~~~~~~~~~~-  602 (683)
                      .+.+|........        .....         .....+..++|..+...++....+   ..+.++++...+..... 
T Consensus       449 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  528 (928)
T PF04762_consen  449 SLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDIDDSENSASVE  528 (928)
T ss_pred             CEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEEeccCCCceeEE
Confidence            9999986543221        01100         123457788888887777766654   67888888543321111 


Q ss_pred             ceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCC
Q psy15995        603 EWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASP  640 (683)
Q Consensus       603 ~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~  640 (683)
                      ....-.+.+..+...++...++.-..||.+...+....
T Consensus       529 ~~~~~~~~~~~~~~~~~~~~~~~q~~~G~v~~~~~~~~  566 (928)
T PF04762_consen  529 SSTEVDGVVLIISSSPDSGSLYIQTNDGKVFQLSSDGE  566 (928)
T ss_pred             EEeccCceEEEEeeCCCCcEEEEEECCCEEEEeecCCC
Confidence            11112344555555555554666677888876655443

>KOG2315|consensus

Probab=99.70  E-value=2.6e-13  Score=124.93  Aligned_cols=309  Identities=13%  Similarity=0.152  Sum_probs=197.4

Q ss_pred             EEEecCCeEEEEeCCCCcccccccCc---ccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccc
Q psy15995         59 FLYTNGNSVIIRNIENPAISDIYTEH---SCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDI  135 (683)
Q Consensus        59 l~~~~~~~i~v~~~~~~~~~~~~~~h---~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  135 (683)
                      +++-..-.+.+|+..........-.+   ..+.+..++|++|+++|.+.. ..++|++..+...+.+...          
T Consensus         5 ~aVRsSe~~~l~~~~~~~~~~~~f~~~~~~~~~~v~~~S~~G~lfA~~~~-~~v~i~~~~~~~~~lt~~~----------   73 (566)
T KOG2315|consen    5 YAVRSSEGFYLFNGPGSKDAVTVFEQNKTSRPCNVFAYSNNGRLFAYSDN-QVVKVFEIATLKVVLCVEL----------   73 (566)
T ss_pred             EEEEccceeEEeccCCccccccccccCCCCCcceeEEEcCCCcEEEEEcC-CeEEEEEccCCcEEEEecc----------
Confidence            44445567888887654333222233   556788999999999988754 4899999988853322221          


Q ss_pred             eeeeeecceeeeEeeccceEEEee-----cC-----CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEec
Q psy15995        136 GTLLSLTSIRNILVLSIGFYIASG-----DI-----SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE  205 (683)
Q Consensus       136 ~~~~~~~~i~~~~~s~~~~~l~~~-----~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  205 (683)
                            ....++.|+|-|.+|.+-     ..     .-.+.+|+++++.....+......+  .++.|++|..+.+-...
T Consensus        74 ------~~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~--W~~qfs~dEsl~arlv~  145 (566)
T KOG2315|consen   74 ------KKTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNG--WVPQFSIDESLAARLVS  145 (566)
T ss_pred             ------ceeeeeeecccccccccccccccccCCCCCCCceeeeeeccceehhheehhhhcC--cccccccchhhhhhhhc
Confidence                  357789999999998762     11     2357899999954433333222222  58999999887766555


Q ss_pred             CCceEEEEEEccCCCceeeeecCCcCeEEEEeecCC-CeEEEE-----eeCCCeEEEEcCCCCceeeecc---ccccCeE
Q psy15995        206 GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSR-PFRIIT-----GSEDNTIAVFEGPPFKFKMTKQ---EHSRFVQ  276 (683)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~-----~~~d~~i~iw~~~~~~~~~~~~---~~~~~v~  276 (683)
                      +.   +++++.... ..-.-.-|...|+.+.++|.. ...+++     .+.-+.+++|.......-..+.   -....=.
T Consensus       146 ne---v~f~~~~~f-~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkv  221 (566)
T KOG2315|consen  146 NE---VQFYDLGSF-KTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKV  221 (566)
T ss_pred             ce---EEEEecCCc-cceeeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhcccccccee
Confidence            43   455555542 122234467889999999984 333443     3556789999876322211111   1122234


Q ss_pred             EEEECCCCCE-EEEEc--CC---------CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEE--CCCcEEE
Q psy15995        277 AVRYSPSGSH-FASAG--FD---------GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS--GDKTCKL  342 (683)
Q Consensus       277 ~~~~~~~~~~-l~~~~--~d---------g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i  342 (683)
                      .+.|++-|.- |+.++  -|         .++++.+++.......+.   ..++|.++.|+|+++.++++-  .--.+.+
T Consensus       222 qm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~---k~GPVhdv~W~~s~~EF~VvyGfMPAkvti  298 (566)
T KOG2315|consen  222 QMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLL---KEGPVHDVTWSPSGREFAVVYGFMPAKVTI  298 (566)
T ss_pred             EEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecC---CCCCceEEEECCCCCEEEEEEecccceEEE
Confidence            5789888873 33222  22         468888887555555554   688999999999998877654  3456788


Q ss_pred             EECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeC
Q psy15995        343 WDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSH  422 (683)
Q Consensus       343 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  422 (683)
                      +|++. ..+..+                                              ..++=.++-|+|.|++++.++-
T Consensus       299 fnlr~-~~v~df----------------------------------------------~egpRN~~~fnp~g~ii~lAGF  331 (566)
T KOG2315|consen  299 FNLRG-KPVFDF----------------------------------------------PEGPRNTAFFNPHGNIILLAGF  331 (566)
T ss_pred             EcCCC-CEeEeC----------------------------------------------CCCCccceEECCCCCEEEEeec
Confidence            88763 222221                                              2455677889999999987765


Q ss_pred             ---CCcEEEEcCCCCCcceec
Q psy15995        423 ---DGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       423 ---dg~i~~w~~~~~~~~~~~  440 (683)
                         .|.+-+||+.+.+.+...
T Consensus       332 GNL~G~mEvwDv~n~K~i~~~  352 (566)
T KOG2315|consen  332 GNLPGDMEVWDVPNRKLIAKF  352 (566)
T ss_pred             CCCCCceEEEeccchhhcccc
Confidence               478899998876655443

>KOG2315|consensus

Probab=99.70  E-value=1.6e-13  Score=126.30  Aligned_cols=317  Identities=16%  Similarity=0.156  Sum_probs=207.6

Q ss_pred             eEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEE-----ecCCC-----CEEEEeCCC
Q psy15995         47 PIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIAS-----GDISG-----KVRIWDTVN  116 (683)
Q Consensus        47 ~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las-----~~~dg-----~i~iwd~~~  116 (683)
                      ....++|++|+++|++.+..+.|++..++..+.+..  ...+.++.|||-|.||.+     ...++     .+.+|++++
T Consensus        37 ~~v~~~S~~G~lfA~~~~~~v~i~~~~~~~~~lt~~--~~~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet  114 (566)
T KOG2315|consen   37 CNVFAYSNNGRLFAYSDNQVVKVFEIATLKVVLCVE--LKKTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVET  114 (566)
T ss_pred             ceeEEEcCCCcEEEEEcCCeEEEEEccCCcEEEEec--cceeeeeeecccccccccccccccccCCCCCCCceeeeeecc
Confidence            356679999999999999999999999885433322  227899999999999976     22232     378999999


Q ss_pred             cccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCC
Q psy15995        117 KEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPD  196 (683)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~  196 (683)
                      +.....+....              ..-.++.|++|..+.| --..+.+.+|++.+-+..   ...-+...|..+.+||.
T Consensus       115 ~~~~s~~q~k~--------------Q~~W~~qfs~dEsl~a-rlv~nev~f~~~~~f~~~---~~kl~~~~i~~f~lSpg  176 (566)
T KOG2315|consen  115 GVQRSQIQKKM--------------QNGWVPQFSIDESLAA-RLVSNEVQFYDLGSFKTI---QHKLSVSGITMLSLSPG  176 (566)
T ss_pred             ceehhheehhh--------------hcCcccccccchhhhh-hhhcceEEEEecCCccce---eeeeeccceeeEEecCC
Confidence            65544443321              1224777888875332 233567999998873322   12223478899999987


Q ss_pred             CC--eEEEEe---cCCceEEEEEEccCCCceee---eecCCcCeEEEEeecCCCeEEEEeeC-----------CCeEEEE
Q psy15995        197 NQ--RMVVVG---EGRERFGHVFMSETGTSVGE---ISGQSKPINSCDFKPSRPFRIITGSE-----------DNTIAVF  257 (683)
Q Consensus       197 ~~--~l~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~~~-----------d~~i~iw  257 (683)
                      +.  .+|+-.   .+.-..+++|....+..-..   -.-....-..+.|++.+.-+|+..+.           ..++++.
T Consensus       177 p~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll  256 (566)
T KOG2315|consen  177 PEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLL  256 (566)
T ss_pred             CCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEE
Confidence            44  333322   12222344444331111111   11112233466788777765555443           2467777


Q ss_pred             cCCCCceeeeccccccCeEEEEECCCCCEEEEEc--CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEE
Q psy15995        258 EGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAG--FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS  335 (683)
Q Consensus       258 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  335 (683)
                      +.+.......+ ...++|.++.|+|+++.++++.  .-..+.++|++ +..+..+    ..++-.++-|+|.|++++.++
T Consensus       257 ~t~g~s~~V~L-~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df----~egpRN~~~fnp~g~ii~lAG  330 (566)
T KOG2315|consen  257 ATQGESVSVPL-LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF----PEGPRNTAFFNPHGNIILLAG  330 (566)
T ss_pred             EecCceEEEec-CCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC----CCCCccceEECCCCCEEEEee
Confidence            77633333333 3578999999999998776543  45689999964 5666666    556778999999999998887


Q ss_pred             C---CCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeC
Q psy15995        336 G---DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSP  412 (683)
Q Consensus       336 ~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  412 (683)
                      -   .|.+.+||..+.+.+..+.                                              ...-+-+.|+|
T Consensus       331 FGNL~G~mEvwDv~n~K~i~~~~----------------------------------------------a~~tt~~eW~P  364 (566)
T KOG2315|consen  331 FGNLPGDMEVWDVPNRKLIAKFK----------------------------------------------AANTTVFEWSP  364 (566)
T ss_pred             cCCCCCceEEEeccchhhccccc----------------------------------------------cCCceEEEEcC
Confidence            6   4779999998877665442                                              12234578999


Q ss_pred             CCCEEEEEeC------CCcEEEEcCCCCC
Q psy15995        413 DRGTVFTGSH------DGFITRWNAKTGE  435 (683)
Q Consensus       413 ~~~~l~~~~~------dg~i~~w~~~~~~  435 (683)
                      ||++++++..      |+.++||+.....
T Consensus       365 dGe~flTATTaPRlrvdNg~KiwhytG~~  393 (566)
T KOG2315|consen  365 DGEYFLTATTAPRLRVDNGIKIWHYTGSL  393 (566)
T ss_pred             CCcEEEEEeccccEEecCCeEEEEecCce
Confidence            9999998765      6778999976543

>KOG2321|consensus

Probab=99.69  E-value=1.2e-14  Score=133.68  Aligned_cols=296  Identities=12%  Similarity=0.160  Sum_probs=213.1

Q ss_pred             cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee
Q psy15995        227 GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL  306 (683)
Q Consensus       227 ~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~  306 (683)
                      .+...-+.+..+|||+|++++|...-.|++||+....+...-.-....|.-.-++.|-..++.-..|.+|.+.... |..
T Consensus        49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~-G~h  127 (703)
T KOG2321|consen   49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKY-GRH  127 (703)
T ss_pred             CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhc-Cee
Confidence            4667788999999999999999999999999998776655544445556666666665556666668888776522 221


Q ss_pred             EEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEE
Q psy15995        307 VSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYL  386 (683)
Q Consensus       307 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~  386 (683)
                       ..+..   ...-..++++.-.--|+.++....|+-++++.|+.+..+                                
T Consensus       128 -y~~RI---P~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~--------------------------------  171 (703)
T KOG2321|consen  128 -YRTRI---PKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPF--------------------------------  171 (703)
T ss_pred             -eeeec---CcCCccccccCCCccEEEeecCcceEEEEcccccccccc--------------------------------
Confidence             22221   122345566543333444445557888899988766544                                


Q ss_pred             ecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCe
Q psy15995        387 DVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDT  466 (683)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~  466 (683)
                                  ....+.++++..++...+|++|+.+|.|..||.++......+.....  |.+.               
T Consensus       172 ------------~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~--v~s~---------------  222 (703)
T KOG2321|consen  172 ------------ETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASS--VNSH---------------  222 (703)
T ss_pred             ------------ccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccc--cCCC---------------
Confidence                        22346789999999999999999999999999988765544421100  0000               


Q ss_pred             EEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEE
Q psy15995        467 IKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVH  546 (683)
Q Consensus       467 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~  546 (683)
                                                                       ........++++.|+.+|-.+++|+.+|.+.
T Consensus       223 -------------------------------------------------pg~~~~~svTal~F~d~gL~~aVGts~G~v~  253 (703)
T KOG2321|consen  223 -------------------------------------------------PGGDAAPSVTALKFRDDGLHVAVGTSTGSVL  253 (703)
T ss_pred             -------------------------------------------------ccccccCcceEEEecCCceeEEeeccCCcEE
Confidence                                                             0000123578999999999999999999999


Q ss_pred             EEEcCCCccCcceeecCCcCeeEEEECCC--CCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEE
Q psy15995        547 IYELNNKSLSPKAELDHLGPVTDCSFSPS--NEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVA  624 (683)
Q Consensus       547 i~d~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~  624 (683)
                      |||+...++.........-+|..+.|-+.  +..+++. ....++|||-.+|+.....+   ....++.+|+-|++.+++
T Consensus       254 iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiE---pt~~lND~C~~p~sGm~f  329 (703)
T KOG2321|consen  254 IYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIE---PTSDLNDFCFVPGSGMFF  329 (703)
T ss_pred             EEEcccCCceeecccCCccceeeecccccCCCceEEec-chHHhhhcccccCCceeecc---ccCCcCceeeecCCceEE
Confidence            99999998876666566778999999774  4455544 45779999999999887766   456699999999999999


Q ss_pred             EeecCCcEEEEeCCCCc
Q psy15995        625 SGSLDTTIIIWSLASPA  641 (683)
Q Consensus       625 ~~~~d~~v~iw~~~~~~  641 (683)
                      ++-++..+..|=+..-.
T Consensus       330 ~Ane~~~m~~yyiP~LG  346 (703)
T KOG2321|consen  330 TANESSKMHTYYIPSLG  346 (703)
T ss_pred             EecCCCcceeEEccccC
Confidence            99999988888776544

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.68  E-value=1.4e-13  Score=124.96  Aligned_cols=340  Identities=14%  Similarity=0.149  Sum_probs=233.9

Q ss_pred             EEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceee
Q psy15995         67 VIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRN  146 (683)
Q Consensus        67 i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  146 (683)
                      =.+|+.++......+.....++..+.+||.|++|++.... .|.+|+-.....+.++..                ..+..
T Consensus        14 ~~f~~~~s~~~~~~~~~~~~p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~~~~----------------~~V~~   76 (561)
T COG5354          14 SVFWNSQSEVIHTRFESENWPVAYVSESPLGTYLFSEHAA-GVECWGGPSKAKLVRFRH----------------PDVKY   76 (561)
T ss_pred             EEeecCccccccccccccCcchhheeecCcchheehhhcc-ceEEccccchhheeeeec----------------CCcee
Confidence            3456666666555566678899999999999999997666 599999887764444332                56889


Q ss_pred             eEeeccceEEEeecC---------------CccEEEEeccccceeeeccccccCCCee-EEEEcCCCCeEEEEecCCceE
Q psy15995        147 ILVLSIGFYIASGDI---------------SGKVRIWDTVNKEHILKNEFHPIGGPIK-DIAWSPDNQRMVVVGEGRERF  210 (683)
Q Consensus       147 ~~~s~~~~~l~~~~~---------------d~~i~iwd~~~~~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~~~~~~~  210 (683)
                      +.|+|.++||.+-+.               ++.+.+||..++..+..+.......... -+.|+-+.+++|-...+.   
T Consensus        77 ~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~s---  153 (561)
T COG5354          77 LDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSS---  153 (561)
T ss_pred             cccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccCe---
Confidence            999999999998654               2359999999998776666554332244 689999999888775543   


Q ss_pred             EEEEEccCCCc-eeeee-cCCcCeEEEEeecCCCe-EEEE-----eeCCCeEEEEcCCCCceeeeccccccCeEEEEECC
Q psy15995        211 GHVFMSETGTS-VGEIS-GQSKPINSCDFKPSRPF-RIIT-----GSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSP  282 (683)
Q Consensus       211 ~~~~~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~-~l~~-----~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~  282 (683)
                      +.++.. ++.. ...+. .....|....|+|.++. .|+.     .+.++.+++|.+.....+....-....=..+.|.+
T Consensus       154 l~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~  232 (561)
T COG5354         154 LYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQV  232 (561)
T ss_pred             EEEEec-CCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEec
Confidence            455554 2211 11111 12466888899997432 1333     45678999999887666554443344445688999


Q ss_pred             CCCEEEEEc-----------CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEE--CCCcEEEEECCCCc
Q psy15995        283 SGSHFASAG-----------FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS--GDKTCKLWDIETKS  349 (683)
Q Consensus       283 ~~~~l~~~~-----------~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~  349 (683)
                      .|++|+.--           .+..++++++....+.... .  ..++|...+|.|.++.+++++  .+-.+.++|++.+ 
T Consensus       233 ~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~-~--~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-  308 (561)
T COG5354         233 LGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEK-D--LKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-  308 (561)
T ss_pred             CCceEEEEEEEeeecccceeccceEEEEeecccccceec-c--ccccceeeeecccCCceeEEecccccceeecccccc-
Confidence            999765421           1356888887744443332 2  578999999999998887766  4667888998866 


Q ss_pred             eeeEEEecCcceeceEEEEecCCEEEEEecC---CcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEe-----
Q psy15995        350 VVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS---GFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS-----  421 (683)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----  421 (683)
                      ....+   .......+.++|.+++++.++.+   |.+.+||.......+..+.+..  ..-+.|+||++++.+..     
T Consensus       309 l~~~~---Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n--~s~~~wspd~qF~~~~~ts~k~  383 (561)
T COG5354         309 LRFYF---PEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLN--TSYCDWSPDGQFYDTDTTSEKL  383 (561)
T ss_pred             eEEec---CCcccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeecCC--ceEeeccCCceEEEecCCCccc
Confidence            32222   22334556678889988886654   6899999987666554555433  34467999999888654     


Q ss_pred             -CCCcEEEEcCCCCCc
Q psy15995        422 -HDGFITRWNAKTGEN  436 (683)
Q Consensus       422 -~dg~i~~w~~~~~~~  436 (683)
                       .|..+.+||+.....
T Consensus       384 ~~Dn~i~l~~v~g~~~  399 (561)
T COG5354         384 RVDNSIKLWDVYGAKV  399 (561)
T ss_pred             ccCcceEEEEecCchh
Confidence             367899999876543

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.68  E-value=1.5e-14  Score=142.42  Aligned_cols=236  Identities=14%  Similarity=0.144  Sum_probs=155.2

Q ss_pred             eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCC---CCEEEEeCCCcccccccccccCCCCcccceeeeeec
Q psy15995         66 SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDIS---GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLT  142 (683)
Q Consensus        66 ~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (683)
                      .|.+||...... +.+..|...+.+.+|||||++|+..+.+   ..|.+||+.+++........               .
T Consensus       185 ~l~i~D~~g~~~-~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~---------------g  248 (433)
T PRK04922        185 ALQVADSDGYNP-QTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFR---------------G  248 (433)
T ss_pred             EEEEECCCCCCc-eEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCC---------------C
Confidence            699999865544 4466788899999999999999987633   46999999877542211111               2


Q ss_pred             ceeeeEeeccceEEEe-ecCCc--cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCC-ceEEEEEEccC
Q psy15995        143 SIRNILVLSIGFYIAS-GDISG--KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR-ERFGHVFMSET  218 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~~-~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~-~~~~~~~~~~~  218 (683)
                      ......|+|||+.|+. .+.+|  .|.+||+.+++...   +..+.......+|+|||+.+++.+... ...+++++.+.
T Consensus       249 ~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~---lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~  325 (433)
T PRK04922        249 INGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTR---LTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASG  325 (433)
T ss_pred             CccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeEE---CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCC
Confidence            2346789999997764 44444  59999998876432   223334556789999999999887543 22244444444


Q ss_pred             CCceeeeecCCcCeEEEEeecCCCeEEEEeeCCC--eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCC---
Q psy15995        219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDN--TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD---  293 (683)
Q Consensus       219 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---  293 (683)
                      ++ ...+..+.......+|+|+++.++++...++  .|.+||..+++... +. +........|+|||++++..+.+   
T Consensus       326 g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~-Lt-~~~~~~~p~~spdG~~i~~~s~~~g~  402 (433)
T PRK04922        326 GS-AERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRT-LT-PGSLDESPSFAPNGSMVLYATREGGR  402 (433)
T ss_pred             CC-eEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeEE-CC-CCCCCCCceECCCCCEEEEEEecCCc
Confidence            44 3333334444557899999997444433333  68999988876553 33 22245567999999987766653   


Q ss_pred             CcEEEEeCCCCeeEEeccCCccccCeEEEEEcc
Q psy15995        294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKP  326 (683)
Q Consensus       294 g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~  326 (683)
                      +.+.+++... .....+..  +.+.+...+|+|
T Consensus       403 ~~L~~~~~~g-~~~~~l~~--~~g~~~~p~wsp  432 (433)
T PRK04922        403 GVLAAVSTDG-RVRQRLVS--ADGEVREPAWSP  432 (433)
T ss_pred             eEEEEEECCC-CceEEccc--CCCCCCCCccCC
Confidence            4688888754 44454443  455667777775

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.67  E-value=1.7e-14  Score=141.37  Aligned_cols=235  Identities=13%  Similarity=0.138  Sum_probs=151.4

Q ss_pred             CeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCC---CCEEEEeCCCcccccccccccCCCCcccceeeeee
Q psy15995         65 NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDIS---GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSL  141 (683)
Q Consensus        65 ~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (683)
                      ..|.++|..... .+.+..+...+.+.+|||||+.||..+.+   ..|.+||+.+++........               
T Consensus       176 ~~L~~~D~dG~~-~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~---------------  239 (427)
T PRK02889        176 YQLQISDADGQN-AQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFK---------------  239 (427)
T ss_pred             cEEEEECCCCCC-ceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCC---------------
Confidence            368888875443 34456788899999999999999876643   35999999888543211111               


Q ss_pred             cceeeeEeeccceEEE-eecCCccEEEEec--cccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc-
Q psy15995        142 TSIRNILVLSIGFYIA-SGDISGKVRIWDT--VNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE-  217 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~-~~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~-  217 (683)
                      ......+|+|||+.|+ +.+.+|...||.+  .++.. .  .+..+.+......|+|||+.++..+..... ..+|..+ 
T Consensus       240 g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~--~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~-~~Iy~~~~  315 (427)
T PRK02889        240 GSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGL-R--RLTQSSGIDTEPFFSPDGRSIYFTSDRGGA-PQIYRMPA  315 (427)
T ss_pred             CCccceEECCCCCEEEEEEccCCCceEEEEECCCCCc-E--ECCCCCCCCcCeEEcCCCCEEEEEecCCCC-cEEEEEEC
Confidence            2345789999999887 4677887666654  44432 1  222333456678999999999887653221 3455443 


Q ss_pred             -CCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCC---eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCC
Q psy15995        218 -TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDN---TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD  293 (683)
Q Consensus       218 -~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  293 (683)
                       .+. ...+..+........|+|+|++ ++..+.++   .|.+||+.+++.......  .......|+|||+.|+.++.+
T Consensus       316 ~~g~-~~~lt~~g~~~~~~~~SpDG~~-Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~--~~~~~p~~spdg~~l~~~~~~  391 (427)
T PRK02889        316 SGGA-AQRVTFTGSYNTSPRISPDGKL-LAYISRVGGAFKLYVQDLATGQVTALTDT--TRDESPSFAPNGRYILYATQQ  391 (427)
T ss_pred             CCCc-eEEEecCCCCcCceEECCCCCE-EEEEEccCCcEEEEEEECCCCCeEEccCC--CCccCceECCCCCEEEEEEec
Confidence             333 3333333334456889999997 55444433   699999988775543322  234678999999988877654


Q ss_pred             C---cEEEEeCCCCeeEEeccCCccccCeEEEEEcc
Q psy15995        294 G---KVFLYDGASADLVSELGNPAHKGGVYAVAWKP  326 (683)
Q Consensus       294 g---~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~  326 (683)
                      +   .+.+.+. ++.....+..  +.+.+...+|+|
T Consensus       392 ~g~~~l~~~~~-~g~~~~~l~~--~~g~~~~p~wsp  424 (427)
T PRK02889        392 GGRSVLAAVSS-DGRIKQRLSV--QGGDVREPSWGP  424 (427)
T ss_pred             CCCEEEEEEEC-CCCceEEeec--CCCCCCCCccCC
Confidence            3   3555565 4555555543  556677778876

>KOG1272|consensus

Probab=99.67  E-value=8.1e-16  Score=137.34  Aligned_cols=232  Identities=17%  Similarity=0.206  Sum_probs=190.3

Q ss_pred             ccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCcc
Q psy15995         85 SCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGK  164 (683)
Q Consensus        85 ~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~  164 (683)
                      .-.-..+.++.+|++|+.|+.-|.|.-+|+.++.+..++...               ..|..+.|..+.+++|++- ...
T Consensus       129 eFGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~---------------Etv~Dv~~LHneq~~AVAQ-K~y  192 (545)
T KOG1272|consen  129 EFGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVM---------------ETVRDVTFLHNEQFFAVAQ-KKY  192 (545)
T ss_pred             ccCCeeeeecCCccEEEecCCccceeeeecccceeeeeeehh---------------hhhhhhhhhcchHHHHhhh-hce
Confidence            445568899999999999999999999999999988877666               6788999999999998876 467


Q ss_pred             EEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeE
Q psy15995        165 VRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFR  244 (683)
Q Consensus       165 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  244 (683)
                      +.|||-..-+ +....-   ...|..+.|-|.--+|++++..  .+....+..+|+.+..+....+.+..+.-+|-+. .
T Consensus       193 ~yvYD~~GtE-lHClk~---~~~v~rLeFLPyHfLL~~~~~~--G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~Na-V  265 (545)
T KOG1272|consen  193 VYVYDNNGTE-LHCLKR---HIRVARLEFLPYHFLLVAASEA--GFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNA-V  265 (545)
T ss_pred             EEEecCCCcE-Eeehhh---cCchhhhcccchhheeeecccC--CceEEEeechhhhhHHHHccCCccchhhcCCccc-e
Confidence            8999965433 222221   2678899999987666665544  3467888889999999999999999999999887 5


Q ss_pred             EEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEE
Q psy15995        245 IITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW  324 (683)
Q Consensus       245 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~  324 (683)
                      +-+|..+|+|.+|.....+.+..+..|.++|.++++.++|++++|++.|..++|||++.-..+.++..   .-+...+++
T Consensus       266 ih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t---p~~a~~ls~  342 (545)
T KOG1272|consen  266 IHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT---PHPASNLSL  342 (545)
T ss_pred             EEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec---CCCcccccc
Confidence            88999999999999999999999999999999999999999999999999999999998887766653   345677888


Q ss_pred             ccCCCEEEEEECCCcEEEEE
Q psy15995        325 KPDGTQLLTASGDKTCKLWD  344 (683)
Q Consensus       325 ~~~~~~l~~~~~dg~i~iwd  344 (683)
                      |..|  +++++....+.+|.
T Consensus       343 Sqkg--lLA~~~G~~v~iw~  360 (545)
T KOG1272|consen  343 SQKG--LLALSYGDHVQIWK  360 (545)
T ss_pred             cccc--ceeeecCCeeeeeh
Confidence            8654  34444445799995

>KOG2314|consensus

Probab=99.66  E-value=1.1e-13  Score=126.86  Aligned_cols=316  Identities=16%  Similarity=0.167  Sum_probs=214.7

Q ss_pred             CCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecC-----------CCCEEEE
Q psy15995         44 RGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDI-----------SGKVRIW  112 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~-----------dg~i~iw  112 (683)
                      +-.-+.+.|||.|.||++---..|.+|--++-..++.|. |. .|.-+.|||+.+||+|-+.           ...++||
T Consensus       210 nWTetyv~wSP~GTYL~t~Hk~GI~lWGG~~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IW  287 (698)
T KOG2314|consen  210 NWTETYVRWSPKGTYLVTFHKQGIALWGGESFDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIW  287 (698)
T ss_pred             cceeeeEEecCCceEEEEEeccceeeecCccHHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEE
Confidence            345678999999999999988889999888777777665 65 5889999999999998542           1469999


Q ss_pred             eCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEE
Q psy15995        113 DTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIA  192 (683)
Q Consensus       113 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~  192 (683)
                      |+.+|.....+.....+.           ....-..||.|++|+|--.. .+|.||+..+-..+-...+..  ..|....
T Consensus       288 DI~tG~lkrsF~~~~~~~-----------~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki--~gIr~Fs  353 (698)
T KOG2314|consen  288 DIATGLLKRSFPVIKSPY-----------LKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKI--SGIRDFS  353 (698)
T ss_pred             EccccchhcceeccCCCc-----------cccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCC--ccccCcc
Confidence            999998888776532111           22334579999999998776 579999988755444444332  6789999


Q ss_pred             EcCCCCeEEEEecCCc---eEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEe----------eCCCeEEEEcC
Q psy15995        193 WSPDNQRMVVVGEGRE---RFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITG----------SEDNTIAVFEG  259 (683)
Q Consensus       193 ~s~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~----------~~d~~i~iw~~  259 (683)
                      |+|.++.||.-....+   ..+.+....+++.++...-+.-.=..+-|-.+|.+ |+.-          +.-..+.|+.+
T Consensus       354 wsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdy-LcvkvdR~tK~~~~g~f~n~eIfri  432 (698)
T KOG2314|consen  354 WSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDY-LCVKVDRHTKSKVKGQFSNLEIFRI  432 (698)
T ss_pred             cCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcE-EEEEEEeeccccccceEeeEEEEEe
Confidence            9999999887654322   22344444556666655555444445667777775 3321          11223555555


Q ss_pred             CCCceeeeccccccCeEEEEECCCCCEEEEEcC---CCcEEEEeCCCC----eeEEeccCCccccCeEEEEEccCCCEEE
Q psy15995        260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF---DGKVFLYDGASA----DLVSELGNPAHKGGVYAVAWKPDGTQLL  332 (683)
Q Consensus       260 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~  332 (683)
                      +........-.-...|...+|-|.|+.+++-+.   ..++.+|.+++.    +.+..+    .......+.|+|.|++++
T Consensus       433 reKdIpve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~----dk~~~N~vfwsPkG~fvv  508 (698)
T KOG2314|consen  433 REKDIPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKEL----DKKFANTVFWSPKGRFVV  508 (698)
T ss_pred             eccCCCceeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhh----cccccceEEEcCCCcEEE
Confidence            544433333345677899999999997776543   357888887732    222233    445678899999999988


Q ss_pred             EEE---CCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCC
Q psy15995        333 TAS---GDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSG  381 (683)
Q Consensus       333 ~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g  381 (683)
                      .+.   ..|.+.++|+..... .............+.+.|.|+++++++...
T Consensus       509 va~l~s~~g~l~F~D~~~a~~-k~~~~~eh~~at~veWDPtGRYvvT~ss~w  559 (698)
T KOG2314|consen  509 VAALVSRRGDLEFYDTDYADL-KDTASPEHFAATEVEWDPTGRYVVTSSSSW  559 (698)
T ss_pred             EEEecccccceEEEecchhhh-hhccCccccccccceECCCCCEEEEeeehh
Confidence            764   468899999874222 122223334455677888999999887643

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.66  E-value=4.9e-14  Score=139.16  Aligned_cols=235  Identities=15%  Similarity=0.119  Sum_probs=155.1

Q ss_pred             eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecC---CCCEEEEeCCCcccccccccccCCCCcccceeeeeec
Q psy15995         66 SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDI---SGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLT  142 (683)
Q Consensus        66 ~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (683)
                      .|.++|.++... +.+..|...+.+.+|||||+.|+..+.   +..|.+||+.+++... +...+              .
T Consensus       183 ~l~~~d~dg~~~-~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~-l~~~~--------------g  246 (435)
T PRK05137        183 RLAIMDQDGANV-RYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQREL-VGNFP--------------G  246 (435)
T ss_pred             EEEEECCCCCCc-EEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEE-eecCC--------------C
Confidence            799999865554 457788889999999999999987653   4579999998875421 11111              3


Q ss_pred             ceeeeEeeccceEEE-eecCCcc--EEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCC-ceEEEEEEccC
Q psy15995        143 SIRNILVLSIGFYIA-SGDISGK--VRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR-ERFGHVFMSET  218 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~-~~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~-~~~~~~~~~~~  218 (683)
                      .+....|+|||+.|+ +.+.++.  |.+||+.+++...   +..+.+......|+|||+.++..+... ...+++++.+.
T Consensus       247 ~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~---Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g  323 (435)
T PRK05137        247 MTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTR---LTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADG  323 (435)
T ss_pred             cccCcEECCCCCEEEEEEecCCCceEEEEECCCCceEE---ccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCC
Confidence            456778999998776 4455554  7777888775432   333445567899999999999877432 23345555544


Q ss_pred             CCceeeeecCCcCeEEEEeecCCCeEEEEeeCC--CeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCC---
Q psy15995        219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSED--NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD---  293 (683)
Q Consensus       219 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---  293 (683)
                      +. ...+..+...+....|+|+++.++++....  ..|.+||...+.. ..+. ....+....|+|||+.|+..+.+   
T Consensus       324 ~~-~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~  400 (435)
T PRK05137        324 SN-PRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT-SGFLVEGPTWAPNGRVIMFFRQTPGS  400 (435)
T ss_pred             CC-eEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Eecc-CCCCCCCCeECCCCCEEEEEEccCCC
Confidence            43 444554556677889999999744443322  3678888755543 2232 22346788999999988765442   


Q ss_pred             ---CcEEEEeCCCCeeEEeccCCccccCeEEEEEcc
Q psy15995        294 ---GKVFLYDGASADLVSELGNPAHKGGVYAVAWKP  326 (683)
Q Consensus       294 ---g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~  326 (683)
                         ..++++|+..+.. ..+.   ..+.+...+|+|
T Consensus       401 ~~~~~L~~~dl~g~~~-~~l~---~~~~~~~p~Wsp  432 (435)
T PRK05137        401 GGAPKLYTVDLTGRNE-REVP---TPGDASDPAWSP  432 (435)
T ss_pred             CCcceEEEEECCCCce-EEcc---CCCCccCcccCC
Confidence               2578888766554 3443   233456667765

>KOG2041|consensus

Probab=99.65  E-value=4.3e-12  Score=120.27  Aligned_cols=494  Identities=11%  Similarity=0.076  Sum_probs=287.0

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceee-eeecceeeeEeeccceEEEeecCC
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTL-LSLTSIRNILVLSIGFYIASGDIS  162 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~d  162 (683)
                      ......|++|+....|+|.|+.||.++|-.+.+...-....+-....+...-+++ .+...|..+.|..+.+.|-+...+
T Consensus        13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~   92 (1189)
T KOG2041|consen   13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTS   92 (1189)
T ss_pred             CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCC
Confidence            3456789999999999999999999999999876543332221111111111222 234678889999999999999999


Q ss_pred             ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCC
Q psy15995        163 GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRP  242 (683)
Q Consensus       163 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  242 (683)
                      |.|.+|-+-++.-.-..........|.+++|+.||+.++.+..++..++--  . .|..+.--.-.......+.|++|.+
T Consensus        93 GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGs--v-dGNRIwgKeLkg~~l~hv~ws~D~~  169 (1189)
T KOG2041|consen   93 GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGS--V-DGNRIWGKELKGQLLAHVLWSEDLE  169 (1189)
T ss_pred             ceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEe--e-ccceecchhcchheccceeecccHH
Confidence            999999998886554444444567899999999999999988876432211  1 1222211111122244788999988


Q ss_pred             eEEEEeeCCCeEEEEcCCCCc-------eeee----ccccccCeEEEEEC--------CCCCEEEEEcCCCcEEEEeCCC
Q psy15995        243 FRIITGSEDNTIAVFEGPPFK-------FKMT----KQEHSRFVQAVRYS--------PSGSHFASAGFDGKVFLYDGAS  303 (683)
Q Consensus       243 ~~l~~~~~d~~i~iw~~~~~~-------~~~~----~~~~~~~v~~~~~~--------~~~~~l~~~~~dg~i~iw~~~~  303 (683)
                      . ++.+-.+|.+.++|.+..-       +...    +......|-.+.|.        |+...|+++-.+|.+.+-.-.+
T Consensus       170 ~-~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eN  248 (1189)
T KOG2041|consen  170 Q-ALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSEN  248 (1189)
T ss_pred             H-HHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcC
Confidence            4 7778888999999854321       1000    11112234455553        4778999999999998876555


Q ss_pred             CeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcE
Q psy15995        304 ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFI  383 (683)
Q Consensus       304 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i  383 (683)
                      ......+.   ..-.+....|+++|..|++++.+..     ....+..                             +.|
T Consensus       249 D~~Pvv~d---tgm~~vgakWnh~G~vLAvcG~~~d-----a~~~~d~-----------------------------n~v  291 (1189)
T KOG2041|consen  249 DPEPVVVD---TGMKIVGAKWNHNGAVLAVCGNDSD-----ADEPTDS-----------------------------NKV  291 (1189)
T ss_pred             CCCCeEEe---cccEeecceecCCCcEEEEccCccc-----ccCcccc-----------------------------ceE
Confidence            44433333   3357889999999999999987531     1111100                             111


Q ss_pred             EEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEE-
Q psy15995        384 SYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCG-  462 (683)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-  462 (683)
                      .+|..-  +..+.+++-....|++++|-..|-.++.+ -|+.|.+=+++..-.-...              .+.++-.- 
T Consensus       292 ~Fysp~--G~i~gtlkvpg~~It~lsWEg~gLriA~A-vdsfiyfanIRP~ykWgy~--------------e~TvVy~y~  354 (1189)
T KOG2041|consen  292 HFYSPY--GHIVGTLKVPGSCITGLSWEGTGLRIAIA-VDSFIYFANIRPEYKWGYI--------------EETVVYVYQ  354 (1189)
T ss_pred             EEeccc--hhheEEEecCCceeeeeEEcCCceEEEEE-ecceEEEEeecccceEEEe--------------eeEEEEEEc
Confidence            111111  33455666677889999998888777766 5778877776543221111              01111000 


Q ss_pred             ----cCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEE
Q psy15995        463 ----IDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAV  538 (683)
Q Consensus       463 ----~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  538 (683)
                          -.-.|.+||..+++.....                                       -.+..++++..+.-.|+.
T Consensus       355 ~~e~p~y~i~Fwdtk~nek~vK~---------------------------------------V~~~~~~a~~~ehCvL~~  395 (1189)
T KOG2041|consen  355 KEELPQYGIMFWDTKTNEKTVKT---------------------------------------VTHFENMAFYREHCVLIN  395 (1189)
T ss_pred             cCCCcceEEEEEecccChhhhhh---------------------------------------hcceeehheecccEEEEe
Confidence                0124667887765421111                                       112345556666556666


Q ss_pred             EcCCCcEEEEEcC-CCccCccee----ec--CCcCeeEE---EECCCCCEEEEEeCCCeEEEEECCCCcc----------
Q psy15995        539 GGADSKVHIYELN-NKSLSPKAE----LD--HLGPVTDC---SFSPSNEYLVASDAHRKVVLYRVPDFEL----------  598 (683)
Q Consensus       539 ~~~dg~i~i~d~~-~~~~~~~~~----~~--~~~~v~~~---~~s~~~~~l~~~~~d~~i~i~~~~~~~~----------  598 (683)
                      -..|+.+.-++.- +........    ++  -....+.+   -..-++.+++.++.+. +.+|.....+.          
T Consensus       396 ~~d~~~i~e~s~le~~~~~~~l~LCNSIGT~lD~kytdirP~Fv~vn~~~vviAS~e~-~~iWhy~~pK~~s~l~~~k~r  474 (1189)
T KOG2041|consen  396 RQDDGVIPEYSTLENRSRVYFLQLCNSIGTSLDYKYTDIRPKFVCVNGICVVIASEER-YFIWHYVLPKFNSVLAGVKIR  474 (1189)
T ss_pred             ccccCCCcchhhhhcccceEEEeeecccCCcCCCCcceeeeeEEEecceEEEEecccc-EEEEEEeccchhhhhhhhhhc
Confidence            6666665544221 111000000    00  11111111   1122556666666554 67776532111          


Q ss_pred             ---------------ccc-----cceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEE
Q psy15995        599 ---------------AHN-----KEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRL  658 (683)
Q Consensus       599 ---------------~~~-----~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l  658 (683)
                                     ...     ....|...+|.+++.|  .++|..+-..|.|.-|++.+.........   +..|.++
T Consensus       475 kegr~h~Ddtp~ga~d~~l~ys~kt~~G~~DpICAl~~s--dk~l~vareSG~I~rySl~nv~l~n~y~~---n~~~y~~  549 (1189)
T KOG2041|consen  475 KEGRFHGDDTPEGAQDRTLEYSTKTLLGSKDPICALCIS--DKFLMVARESGGIYRYSLNNVVLTNSYPV---NPSIYSI  549 (1189)
T ss_pred             ccccccCCCCccchhhceeeccceeeccCCCcceeeeec--ceEEEEEeccCceEEEEecceeeeecccc---CchheeE
Confidence                           000     1112245678888886  56899999999999999988765554433   4455666


Q ss_pred             EEc-cCCeEEEeeCCCcEEEEee
Q psy15995        659 QWL-DNDLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       659 ~~~-~~~~l~s~~~d~~v~vw~~  680 (683)
                      ... +..+++....-|.+.+.++
T Consensus       550 ~lNCnstRlAiId~~gv~tf~dL  572 (1189)
T KOG2041|consen  550 KLNCNSTRLAIIDLVGVVTFQDL  572 (1189)
T ss_pred             eeccCcchhhhhhhhceeeeeec
Confidence            555 4444444444444444443

>KOG1409|consensus

Probab=99.64  E-value=6.4e-14  Score=120.52  Aligned_cols=326  Identities=17%  Similarity=0.261  Sum_probs=230.0

Q ss_pred             CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcC-CCCceeeec-cccccCeEEEEECCCCCEEEEEcCCCcEE
Q psy15995        220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG-PPFKFKMTK-QEHSRFVQAVRYSPSGSHFASAGFDGKVF  297 (683)
Q Consensus       220 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~-~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  297 (683)
                      ..+..++||.+.++....-|..+. +++.+.|.++++|-- +.++.-..+ .....+++++.+.++...|++|-..|++.
T Consensus        15 ~ll~~~eG~~d~vn~~~l~~~e~g-v~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvt   93 (404)
T KOG1409|consen   15 ELLSKIEGSQDDVNAAILIPKEEG-VISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVT   93 (404)
T ss_pred             hhhhhhcCchhhhhhheeccCCCC-eEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEE
Confidence            345667899999999988888875 999999999999953 333332222 23456899999999999999999999999


Q ss_pred             EEeCCC----CeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCE
Q psy15995        298 LYDGAS----ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDY  373 (683)
Q Consensus       298 iw~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (683)
                      -+.+..    ....+..  ..|...+..+-|+...+.+++.+.|..+.---.+.+..+..+............+.    +
T Consensus        94 efs~sedfnkm~~~r~~--~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~----~  167 (404)
T KOG1409|consen   94 EFALSEDFNKMTFLKDY--LAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDAL----Y  167 (404)
T ss_pred             EEEhhhhhhhcchhhhh--hhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeE----E
Confidence            886543    2233333  34999999999999889999999998776655666665554444333333332222    6


Q ss_pred             EEEEecCCcEEEEecCCC-CcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEE
Q psy15995        374 LLTVSLSGFISYLDVNNP-STPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK  452 (683)
Q Consensus       374 l~~~~~~g~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~  452 (683)
                      ...|...|.+....+... -.++..+.+|.+.+++++|.|....|.+|..|..+.+||+...+.......+|...|..+.
T Consensus       168 ~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~  247 (404)
T KOG1409|consen  168 AFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALS  247 (404)
T ss_pred             EEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhh
Confidence            777888888877776543 4567788999999999999999999999999999999999988887777788998888887


Q ss_pred             Ee--CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCcee----------------------------------eecCC
Q psy15995        453 AT--GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGL----------------------------------DIDEN  496 (683)
Q Consensus       453 ~~--~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~  496 (683)
                      ..  -..+++++.||.|.+|+.+......+...........                                  ..+..
T Consensus       248 ~~~~t~~l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~~  327 (404)
T KOG1409|consen  248 YAQHTRQLISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSNR  327 (404)
T ss_pred             hhhhheeeeeccCCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccCc
Confidence            76  7889999999999999998765544433222110000                                  00000


Q ss_pred             eE--EEEEeceEE--------EEeCCceeeee--cCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy15995        497 TL--VTVTVKQIS--------IVENGAKVSSL--PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNN  552 (683)
Q Consensus       497 ~~--~~~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~  552 (683)
                      ..  .....-.+.        +..........  +....|+.+.+.....+|++++.|..|+|||+..
T Consensus       328 ~~~p~mg~e~~vR~~~~c~~~i~~~~~t~LA~phei~tgItamhlqetlglLvTsG~~Rvi~iwd~~~  395 (404)
T KOG1409|consen  328 SSYPTMGFEFSVRVCDSCYPTIKDEERTPLAIPHEIKTGITAMHLQETLGLLVTSGTDRVIKIWDVRS  395 (404)
T ss_pred             cccccccceeEEEEecccchhhhcCCCCccccccccccceeEEEhhhhccceeecCCceEEEEEechh
Confidence            00  000000111        11111111122  2345678888888889999999999999999864

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.64  E-value=3.8e-12  Score=121.17  Aligned_cols=300  Identities=12%  Similarity=0.186  Sum_probs=187.9

Q ss_pred             EEEEcCC----CcEEEEeC--CCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC----CCcEEEEECCCC-ceeeEEE
Q psy15995        287 FASAGFD----GKVFLYDG--ASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG----DKTCKLWDIETK-SVVSEFI  355 (683)
Q Consensus       287 l~~~~~d----g~i~iw~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~-~~~~~~~  355 (683)
                      +++|+..    +.|++|++  .+++....-. .........++++|++++|++..+    ++.|..|++... ..+..+.
T Consensus         2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~-~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~   80 (345)
T PF10282_consen    2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQT-VAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLN   80 (345)
T ss_dssp             EEEEECCSSSSTEEEEEEEETTTTEEEEEEE-EEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEE
T ss_pred             EEEEcCCCCCCCcEEEEEEcCCCCCceEeee-ecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEee
Confidence            4455554    67888877  5554432221 124456678999999999999987    468888888764 2222221


Q ss_pred             -ec-CcceeceEEEEecCCEEEEEe-cCCcEEEEecCCCCcceeee--ee-----------ccccEEEEEEeCCCCEEEE
Q psy15995        356 -MG-NQVEDQQVSCLWQGDYLLTVS-LSGFISYLDVNNPSTPIRVI--KG-----------HNKPITALALSPDRGTVFT  419 (683)
Q Consensus       356 -~~-~~~~~~~~~~~~~~~~l~~~~-~~g~i~~~~~~~~~~~~~~~--~~-----------~~~~v~~~~~~~~~~~l~~  419 (683)
                       .. .......+...+++++++++. .+|.+.++++..........  ..           ......++.++|+++++++
T Consensus        81 ~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v  160 (345)
T PF10282_consen   81 SVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYV  160 (345)
T ss_dssp             EEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEE
T ss_pred             eeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEE
Confidence             11 344556778888999988887 58899999998754433221  11           1245778999999998887


Q ss_pred             EeC-CCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeE
Q psy15995        420 GSH-DGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTL  498 (683)
Q Consensus       420 ~~~-dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (683)
                      ... ...|.+|++.........                                                          
T Consensus       161 ~dlG~D~v~~~~~~~~~~~l~~----------------------------------------------------------  182 (345)
T PF10282_consen  161 PDLGADRVYVYDIDDDTGKLTP----------------------------------------------------------  182 (345)
T ss_dssp             EETTTTEEEEEEE-TTS-TEEE----------------------------------------------------------
T ss_pred             EecCCCEEEEEEEeCCCceEEE----------------------------------------------------------
Confidence            653 346777776554311000                                                          


Q ss_pred             EEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcC-CCcEEEEEcC--CCccCcceeec-------CCcCee
Q psy15995        499 VTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGA-DSKVHIYELN--NKSLSPKAELD-------HLGPVT  568 (683)
Q Consensus       499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~--~~~~~~~~~~~-------~~~~v~  568 (683)
                                    ......+....++.++|+|+++++++.++ ++.|.+|++.  ++.+.......       ......
T Consensus       183 --------------~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  248 (345)
T PF10282_consen  183 --------------VDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPA  248 (345)
T ss_dssp             --------------EEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEE
T ss_pred             --------------eeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCce
Confidence                          00112334456889999999998876654 7789999998  44322111111       122578


Q ss_pred             EEEECCCCCEEEEEe-CCCeEEEEECC--CCccccccceeeecccEEEEEecCCCCeEEEee-cCCcEEEEeCC--CCce
Q psy15995        569 DCSFSPSNEYLVASD-AHRKVVLYRVP--DFELAHNKEWGFHSAKVNCVAWSPDSALVASGS-LDTTIIIWSLA--SPAK  642 (683)
Q Consensus       569 ~~~~s~~~~~l~~~~-~d~~i~i~~~~--~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~-~d~~v~iw~~~--~~~~  642 (683)
                      .++++|||++|.++. ..+.|.+|++.  ++++...............++++|+|++|+++. .++.|.+|+++  ++..
T Consensus       249 ~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l  328 (345)
T PF10282_consen  249 EIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKL  328 (345)
T ss_dssp             EEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred             eEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcE
Confidence            899999999998765 56789999993  455544333332234489999999999999877 45689999874  4444


Q ss_pred             eeEeecCCCCCCeeEEEE
Q psy15995        643 HIIIKNAHPQSQITRLQW  660 (683)
Q Consensus       643 ~~~~~~~~~~~~v~~l~~  660 (683)
                      ...... ..-....+|.|
T Consensus       329 ~~~~~~-~~~~~p~ci~f  345 (345)
T PF10282_consen  329 TPVGSS-VPIPSPVCIVF  345 (345)
T ss_dssp             EEEEEE-EESSSEEEEEE
T ss_pred             EEeccc-ccCCCCEEEeC
Confidence            333221 12456677766

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.64  E-value=1.5e-10  Score=122.02  Aligned_cols=520  Identities=13%  Similarity=0.125  Sum_probs=277.1

Q ss_pred             cccCCCeEEEeeCCCCCeEEEe-cCCeEEEE----eCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCC
Q psy15995         41 RTQRGQPIVLGGDPKGKNFLYT-NGNSVIIR----NIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTV  115 (683)
Q Consensus        41 ~~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~----~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~  115 (683)
                      ....+.+..+.+-+|..-++.+ .+|.|.+.    +..+... .....-...|.|++||||+..||..+.++++.+-+ .
T Consensus        72 ~~~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~-E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt-~  149 (928)
T PF04762_consen   72 DDPNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEI-EIVGSVDSGILAASWSPDEELLALVTGEGNLLLMT-R  149 (928)
T ss_pred             cCCCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCcee-EEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEe-c
Confidence            3455788999999988877666 68888888    5544433 22223467899999999999999999899888875 3


Q ss_pred             CcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccE--EEEeccccceeeeccccccCCCeeEEEE
Q psy15995        116 NKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKV--RIWDTVNKEHILKNEFHPIGGPIKDIAW  193 (683)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i--~iwd~~~~~~~~~~~~~~~~~~i~~~~~  193 (683)
                      +-+.+.+...++.....         .....+-|-.....+ =|+.....  .+=|..-. ..-...+. ....-..++|
T Consensus       150 ~fd~i~E~~l~~~~~~~---------~~~VsVGWGkKeTQF-~Gs~gK~aa~~~~~p~~~-~~d~~~~s-~dd~~~~ISW  217 (928)
T PF04762_consen  150 DFDPISEVPLDSDDFGE---------SKHVSVGWGKKETQF-HGSAGKAAARQLRDPTVP-KVDEGKLS-WDDGRVRISW  217 (928)
T ss_pred             cceEEEEeecCccccCC---------CceeeeccCcccCcc-CcchhhhhhhhccCCCCC-ccccCccc-cCCCceEEEE
Confidence            33333333333211000         000111111100000 00000000  00000000 00011122 3345678999


Q ss_pred             cCCCCeEEEEec--C-C-ceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeC---CCeEEEEcCC---CCc
Q psy15995        194 SPDNQRMVVVGE--G-R-ERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSE---DNTIAVFEGP---PFK  263 (683)
Q Consensus       194 s~~~~~l~~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~i~iw~~~---~~~  263 (683)
                      -.||+++|+..-  . + .+.++||+-+ |........-.+--.+++|.|.|+. +++...   ...|.+|+-+   -++
T Consensus       218 RGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~l-IA~~q~~~~~~~VvFfErNGLrhge  295 (928)
T PF04762_consen  218 RGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNL-IASSQRLPDRHDVVFFERNGLRHGE  295 (928)
T ss_pred             CCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCE-EEEEEEcCCCcEEEEEecCCcEeee
Confidence            999999999875  2 2 4566777665 5444444444444568899999984 665543   3567777733   233


Q ss_pred             eeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEE--eccCCccccCeEEEEEccC-CCEEEEEECCCcE
Q psy15995        264 FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVS--ELGNPAHKGGVYAVAWKPD-GTQLLTASGDKTC  340 (683)
Q Consensus       264 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i  340 (683)
                      ....+......|..+.|++|+..||....|. |.+|-..+.....  .+..+ ....+..+.|+|. ...|...+.+|.+
T Consensus       296 F~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~-~~~~~~~~~Wdpe~p~~L~v~t~~g~~  373 (928)
T PF04762_consen  296 FTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFS-SSESVNFVKWDPEKPLRLHVLTSNGQY  373 (928)
T ss_pred             EecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEcc-CCCCCCceEECCCCCCEEEEEecCCcE
Confidence            3333334567899999999999999877554 9999988876433  33221 2334556999994 4557777776777


Q ss_pred             EEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCC--cceee-eeeccccEEEEEEeCCCCEE
Q psy15995        341 KLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS--TPIRV-IKGHNKPITALALSPDRGTV  417 (683)
Q Consensus       341 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~--~~~~~-~~~~~~~v~~~~~~~~~~~l  417 (683)
                      ..++..-.....   ....         +++.-.++.-....+.+-.++..-  .|... .-.-..+|.+++|++++..+
T Consensus       374 ~~~~~~~~v~~s---~~~~---------~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~  441 (928)
T PF04762_consen  374 EIYDFAWDVSRS---PGSS---------PNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRF  441 (928)
T ss_pred             EEEEEEEEEEec---CCCC---------ccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeE
Confidence            766543111100   0000         111122222222334444433211  12211 11235789999999999889


Q ss_pred             EEEeCCCcEEEEcCCCCCcce--------ecc---------CCCCcceeEEEEe-CCeEEE-EEcC---CeEEEEeCCCC
Q psy15995        418 FTGSHDGFITRWNAKTGENDR--------VQG---------AGHGNQINGMKAT-GELLYT-CGID---DTIKQVDLSSN  475 (683)
Q Consensus       418 ~~~~~dg~i~~w~~~~~~~~~--------~~~---------~~~~~~v~~~~~~-~~~l~~-~~~d---~~i~~~~~~~~  475 (683)
                      ++-..||.|.+|.........        ...         ......+..+.+. .+.++. ...+   ..+.++++...
T Consensus       442 avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  521 (928)
T PF04762_consen  442 AVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDIDDS  521 (928)
T ss_pred             EEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEEeccC
Confidence            999999999999855432211        000         0122344555555 333332 2222   45556655322


Q ss_pred             cccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCcc
Q psy15995        476 AYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSL  555 (683)
Q Consensus       476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  555 (683)
                      ....                                 ...........+..+...++...++.-..+|.+..++......
T Consensus       522 ~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~G~v~~~~~~~~~~  568 (928)
T PF04762_consen  522 ENSA---------------------------------SVESSTEVDGVVLIISSSPDSGSLYIQTNDGKVFQLSSDGELS  568 (928)
T ss_pred             CCce---------------------------------eEEEEeccCceEEEEeeCCCCcEEEEEECCCEEEEeecCCCcc
Confidence            1100                                 0001111222333444444544466667788888666655433


Q ss_pred             CcceeecCCcCeeEEEECCCCC---EEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcE
Q psy15995        556 SPKAELDHLGPVTDCSFSPSNE---YLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTI  632 (683)
Q Consensus       556 ~~~~~~~~~~~v~~~~~s~~~~---~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v  632 (683)
                      .. ..++...+-..+....+..   .++.-+..|.+++    ++..        -...+++++..  +.+|+.......+
T Consensus       569 ~~-~~fp~~c~~~~~~~~~~~~~~~~~~GLs~~~~Ly~----n~~~--------la~~~tSF~v~--~~~Ll~TT~~h~l  633 (928)
T PF04762_consen  569 QI-VKFPQPCPWMEVCQINGSEDKRVLFGLSSNGRLYA----NSRL--------LASNCTSFAVT--DSFLLFTTTQHTL  633 (928)
T ss_pred             cc-ccCCCCCcEEEEEEECCccceeEEEEECCCCEEEE----CCEE--------EecCCceEEEE--cCEEEEEecCceE
Confidence            32 1122222222222222222   3443344454443    2222        23567888875  4477777777889


Q ss_pred             EEEeCC
Q psy15995        633 IIWSLA  638 (683)
Q Consensus       633 ~iw~~~  638 (683)
                      ++.++.
T Consensus       634 ~fv~L~  639 (928)
T PF04762_consen  634 KFVHLN  639 (928)
T ss_pred             EEEECc
Confidence            999998

>KOG1310|consensus

Probab=99.64  E-value=7.3e-15  Score=134.15  Aligned_cols=168  Identities=18%  Similarity=0.333  Sum_probs=129.7

Q ss_pred             eeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc--CCCEEEEEECCCcEE
Q psy15995        264 FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP--DGTQLLTASGDKTCK  341 (683)
Q Consensus       264 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~  341 (683)
                      ....+.+|++.|.+++|+.+|.+|++|+.|-.+.|||.-..+.+..+. .+|...|.++.|-|  +++.+++|..|..|+
T Consensus        42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~-TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~  120 (758)
T KOG1310|consen   42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSIS-TGHTANIFSVKFVPYTNNRIVLSGAGDKLIK  120 (758)
T ss_pred             hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeee-cccccceeEEeeeccCCCeEEEeccCcceEE
Confidence            456788999999999999999999999999999999999888888887 47999999999998  567899999999999


Q ss_pred             EEECCCCcee---------eEEEecCcceeceEEEEecC-CEEEEEecCCcEEEEecCCCCcceee---------eeecc
Q psy15995        342 LWDIETKSVV---------SEFIMGNQVEDQQVSCLWQG-DYLLTVSLSGFISYLDVNNPSTPIRV---------IKGHN  402 (683)
Q Consensus       342 iwd~~~~~~~---------~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~g~i~~~~~~~~~~~~~~---------~~~~~  402 (683)
                      ++|+...+.-         ...-.-+......++..|++ ..+.++++||.++-+|++.+...-..         +...-
T Consensus       121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~l  200 (758)
T KOG1310|consen  121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQL  200 (758)
T ss_pred             EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhh
Confidence            9999852210         01111122333445555655 78999999999999999875432211         11222


Q ss_pred             ccEEEEEEeCCC-CEEEEEeCCCcEEEEcCC
Q psy15995        403 KPITALALSPDR-GTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       403 ~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~  432 (683)
                      -...++.++|.. .+|++|+.|-..++||.+
T Consensus       201 ielk~ltisp~rp~~laVGgsdpfarLYD~R  231 (758)
T KOG1310|consen  201 IELKCLTISPSRPYYLAVGGSDPFARLYDRR  231 (758)
T ss_pred             heeeeeeecCCCCceEEecCCCchhhhhhhh
Confidence            457789999954 678899999999999964

>KOG2314|consensus

Probab=99.64  E-value=4.7e-13  Score=122.83  Aligned_cols=343  Identities=15%  Similarity=0.167  Sum_probs=226.5

Q ss_pred             eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeeccee
Q psy15995         66 SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIR  145 (683)
Q Consensus        66 ~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  145 (683)
                      ....|+.........-..-.-.=+-+.|||-|.||+|--..| |.+|-=.+-..+.++..                ..+.
T Consensus       191 ~svfwN~~~n~p~~ie~RenWTetyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~H----------------p~Vq  253 (698)
T KOG2314|consen  191 VSVFWNSKFNEPSLIEERENWTETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFYH----------------PGVQ  253 (698)
T ss_pred             eEEEccccCCchhhhhhhhcceeeeEEecCCceEEEEEeccc-eeeecCccHHHHHhccC----------------CCce
Confidence            366788765443332223344567899999999999986665 99997665555544432                5688


Q ss_pred             eeEeeccceEEEeecC-----------CccEEEEeccccceeeeccccccCC-CeeEEEEcCCCCeEEEEecCCceEEEE
Q psy15995        146 NILVLSIGFYIASGDI-----------SGKVRIWDTVNKEHILKNEFHPIGG-PIKDIAWSPDNQRMVVVGEGRERFGHV  213 (683)
Q Consensus       146 ~~~~s~~~~~l~~~~~-----------d~~i~iwd~~~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~~~~~~~~~~  213 (683)
                      .+.|||..+||++-+.           ...++|||+.+|.....+.....+. .-.-..||.|++++|....+.   +.+
T Consensus       254 ~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~s---isI  330 (698)
T KOG2314|consen  254 FIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNS---ISI  330 (698)
T ss_pred             eeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccce---EEE
Confidence            9999999999998543           2579999999998655444321222 234478999999999988764   566


Q ss_pred             EEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeC-----CCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEE
Q psy15995        214 FMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSE-----DNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFA  288 (683)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  288 (683)
                      +...+-.++..-.-....|....|+|.+.. |+--..     -..+.+..+++++.+++..-+.-.=..+.|-.+|.+|+
T Consensus       331 yEtpsf~lld~Kslki~gIr~FswsP~~~l-lAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLc  409 (698)
T KOG2314|consen  331 YETPSFMLLDKKSLKISGIRDFSWSPTSNL-LAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLC  409 (698)
T ss_pred             EecCceeeecccccCCccccCcccCCCcce-EEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEE
Confidence            665553333333344567889999999874 554332     24567777888887777766665556678888898887


Q ss_pred             EEc----------CCCcEEEEeCCCCee-EEeccCCccccCeEEEEEccCCCEEEEEEC---CCcEEEEECCC-CceeeE
Q psy15995        289 SAG----------FDGKVFLYDGASADL-VSELGNPAHKGGVYAVAWKPDGTQLLTASG---DKTCKLWDIET-KSVVSE  353 (683)
Q Consensus       289 ~~~----------~dg~i~iw~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~iwd~~~-~~~~~~  353 (683)
                      .--          .-..+.|+.++.... +..+.   -...|...+|-|.|+.+++.+.   ..++.+|.+++ .....-
T Consensus       410 vkvdR~tK~~~~g~f~n~eIfrireKdIpve~ve---lke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~l  486 (698)
T KOG2314|consen  410 VKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVE---LKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSL  486 (698)
T ss_pred             EEEEeeccccccceEeeEEEEEeeccCCCceeee---cchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhh
Confidence            532          112355666554432 22222   5678999999999998887654   35688888873 222211


Q ss_pred             EEecCcceeceEEEEecCCEEEEEec---CCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCC------C
Q psy15995        354 FIMGNQVEDQQVSCLWQGDYLLTVSL---SGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHD------G  424 (683)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~l~~~~~---~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g  424 (683)
                      ...-.......+.++|.|++++++..   .|.+.++|.............| ...+.+.|.|.|+++++++..      .
T Consensus       487 Vk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh-~~at~veWDPtGRYvvT~ss~wrhk~d~  565 (698)
T KOG2314|consen  487 VKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEH-FAATEVEWDPTGRYVVTSSSSWRHKVDN  565 (698)
T ss_pred             hhhhcccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccc-cccccceECCCCCEEEEeeehhhhcccc
Confidence            22223355677889999999887754   6889999988522222222223 346778999999999998763      3


Q ss_pred             cEEEEcCCC
Q psy15995        425 FITRWNAKT  433 (683)
Q Consensus       425 ~i~~w~~~~  433 (683)
                      --++|+.+.
T Consensus       566 GYri~tfqG  574 (698)
T KOG2314|consen  566 GYRIFTFQG  574 (698)
T ss_pred             ceEEEEeec
Confidence            345555543

>KOG0974|consensus

Probab=99.64  E-value=3.3e-12  Score=126.66  Aligned_cols=469  Identities=13%  Similarity=0.101  Sum_probs=264.4

Q ss_pred             ccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCcc
Q psy15995         85 SCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGK  164 (683)
Q Consensus        85 ~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~  164 (683)
                      -+++++.++-.  +||..|+ ...|.++|+..+..+..+..-..-.-.          .+... .--.+.+++++..-+.
T Consensus         7 ~~~l~~~~~~~--~~llag~-gp~i~~yd~~s~~li~~~~~~~~~~~H----------~~e~~-~~l~~~~~v~~~~~~~   72 (967)
T KOG0974|consen    7 LGPLNLPQLVS--DYLLAGS-GPEILVYDLSSGCLIRHLIQSKILEVH----------RGEGK-VKLLSGKIVTCAKSDE   72 (967)
T ss_pred             cccccchhhcc--ceeeecC-CCceEEeeCCchhHhhhhhhhcccccc----------ccccc-ceeccceEEEEEeecc
Confidence            34445555444  5776654 347999999998776655432110000          00000 0011234444444433


Q ss_pred             EEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCe----EEEEeecC
Q psy15995        165 VRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPI----NSCDFKPS  240 (683)
Q Consensus       165 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~~~  240 (683)
                      +..-+....      ........+....+.-+.+.++.....+.  +.++++..+.....+.......    .-+.++++
T Consensus        73 v~~~~~~~~------~~~~~s~wi~g~~l~~e~k~i~l~~~~ns--~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~  144 (967)
T KOG0974|consen   73 VYVKEASNQ------IIERFSDWIFGAKLFEENKKIALVTSRNS--LLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAE  144 (967)
T ss_pred             eeecchhhh------hhhhccccccccchhhhcceEEEEEcCce--EEEEecccCceehhcCCCceEEEEeEEEEeccCc
Confidence            333222211      11122345555666667777777776643  5677777666665554433322    22234444


Q ss_pred             CCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeE
Q psy15995        241 RPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVY  320 (683)
Q Consensus       241 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~  320 (683)
                      .- .+++|+.-+.|.+|+....+....+.+|.+.|.++.++.||.++++.+.|.++++|++++.+...... -+|...+.
T Consensus       145 ~~-~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~-fgHsaRvw  222 (967)
T KOG0974|consen  145 EL-YIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTG-FGHSARVW  222 (967)
T ss_pred             EE-EEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCccc-ccccceeE
Confidence            44 59999999999999977444444688999999999999999999999999999999999988776222 34999999


Q ss_pred             EEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeee
Q psy15995        321 AVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKG  400 (683)
Q Consensus       321 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~  400 (683)
                      .++|.|+  .+++++.|-+.++|+.. +..+..+..........+....+...+++++.|+.+++|++.....     .+
T Consensus       223 ~~~~~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r~~-----e~  294 (967)
T KOG0974|consen  223 ACCFLPN--RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGRGL-----EG  294 (967)
T ss_pred             EEEeccc--eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhcccc-----cc
Confidence            9999988  89999999999999655 4444566555666677777778888999999999999999875221     11


Q ss_pred             ccccEEE---------EEEeC---------CCCEEEEEeC--CCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEE
Q psy15995        401 HNKPITA---------LALSP---------DRGTVFTGSH--DGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYT  460 (683)
Q Consensus       401 ~~~~v~~---------~~~~~---------~~~~l~~~~~--dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  460 (683)
                      |......         ..|-.         .+..+.....  ++.+...+.           .....+..-....+.++.
T Consensus       295 ~~~~~~~~~s~~kl~~~~f~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~s~~~i~~~~~~~~~v~~  363 (967)
T KOG0974|consen  295 HVEQSSLLSSIVKLKDDQFVKCDTLLNFANHGGKLSILGNKGEKELITFES-----------DSMLRIIFSCTNDDWVAH  363 (967)
T ss_pred             ceeeeeeecchhhhcceeeeehHHHHHHHhcCCeEeecccccccceeeeee-----------ccCccceehccccceeee
Confidence            1111000         00100         1111111111  222222211           112222222222445555


Q ss_pred             EEcCCeEEEEeCCCCcccCCce---ecCCCCceeeec---CCeEEEEEeceEE------------EEeCCceeeeecCCC
Q psy15995        461 CGIDDTIKQVDLSSNAYSGPEV---KLGSQPRGLDID---ENTLVTVTVKQIS------------IVENGAKVSSLPIDY  522 (683)
Q Consensus       461 ~~~d~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~  522 (683)
                      .+..+.+.+.-...........   .....+......   ..........+.+            ..-........+...
T Consensus       364 ~~~k~~~~v~~~~~~~~~~~~~~h~~~s~~~~~~~~~~~~~~~~~~~g~~~~r~~~~~~~~~ad~~~i~~~~~f~~~~~~  443 (967)
T KOG0974|consen  364 MSNKGDIYVAWHQNTIVITTSSLHRKLSANPISQVCEASYVASKLIDGSIQVRNLSGSLESFADVLNIRSLKEFRLPFAF  443 (967)
T ss_pred             ccCCCcEEEEEeecccCccchhHHHHHhhCcccceeeeeeehhhccCCcchhhhhhcccccccceeEEeeeeeeccccCC
Confidence            5555555554443332111110   000000000000   0000000000000            000112333455667


Q ss_pred             CCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceee------cCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCC
Q psy15995        523 EPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL------DHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDF  596 (683)
Q Consensus       523 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~  596 (683)
                      .+.++.-.+....++.|+.-|.+.+|++..+........      ...+.+....--++..++.+.+.||...++.+...
T Consensus       444 ~~~~l~~~~~~~~~l~Gs~~g~lv~~~l~~~~~~~~~~~~~~~~~~~~~si~~~~~kdn~~~~~~~g~dg~~~~~~~~r~  523 (967)
T KOG0974|consen  444 RIPCLTSVVEDNLILIGSRHGELVLYNLDEPNDDIVLSLSRSHELDTGSSITCIRSKDNSAIFMTTGRDGYWSTIELIRG  523 (967)
T ss_pred             CCcceecccCcceEEEccCcCcEEEecCCCCCccceeeccCcccccccccEEEEecCCCcEEEEEecCCcEEEEEEEecC
Confidence            788888889999999999999999999987654332221      11223333333344556667788898888887653

>KOG3881|consensus

Probab=99.63  E-value=8.9e-14  Score=121.87  Aligned_cols=276  Identities=10%  Similarity=0.092  Sum_probs=185.5

Q ss_pred             cccCeEEEEECCCCC--EEEEEcCCCcEEEEeCCCCeeEEec----cCCccccCeEEEEEccCCCEEEEEECCCcEEEEE
Q psy15995        271 HSRFVQAVRYSPSGS--HFASAGFDGKVFLYDGASADLVSEL----GNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWD  344 (683)
Q Consensus       271 ~~~~v~~~~~~~~~~--~l~~~~~dg~i~iw~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  344 (683)
                      ....|..++|.-+++  .+...+.+..+..+......+...+    .......+|..++..  +..|++|-.+|.+.+|.
T Consensus        54 ~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~--dg~Litc~~sG~l~~~~  131 (412)
T KOG3881|consen   54 ELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA--DGTLITCVSSGNLQVRH  131 (412)
T ss_pred             hhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc--CCEEEEEecCCcEEEEe
Confidence            345677788876655  4444446667777776666555443    112245667776665  34688888899999998


Q ss_pred             CCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCC-EEEEEeCC
Q psy15995        345 IETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRG-TVFTGSHD  423 (683)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d  423 (683)
                      ...+..-.                                        .+...+.. ...+..+.-++... .+++|+..
T Consensus       132 ~k~~d~hs----------------------------------------s~l~~la~-g~g~~~~r~~~~~p~Iva~GGke  170 (412)
T KOG3881|consen  132 DKSGDLHS----------------------------------------SKLIKLAT-GPGLYDVRQTDTDPYIVATGGKE  170 (412)
T ss_pred             ccCCcccc----------------------------------------ccceeeec-CCceeeeccCCCCCceEecCchh
Confidence            87553210                                        01111111 13444555555444 45568888


Q ss_pred             --CcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEE
Q psy15995        424 --GFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTV  501 (683)
Q Consensus       424 --g~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (683)
                        ..+.+||+.+.+.+......... -.              +=.+.+|+                              
T Consensus       171 ~~n~lkiwdle~~~qiw~aKNvpnD-~L--------------~LrVPvW~------------------------------  205 (412)
T KOG3881|consen  171 NINELKIWDLEQSKQIWSAKNVPND-RL--------------GLRVPVWI------------------------------  205 (412)
T ss_pred             cccceeeeecccceeeeeccCCCCc-cc--------------cceeeeee------------------------------
Confidence              78999999877443322111000 00              11233333                              


Q ss_pred             EeceEEEEeCCceeeeecCCCCCcEEEEccC--CCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEE
Q psy15995        502 TVKQISIVENGAKVSSLPIDYEPSSISLDHE--HGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYL  579 (683)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  579 (683)
                                             +.+.|-+.  ...+|+++.-+.+++||...++......--.+.+++++...|+++++
T Consensus       206 -----------------------tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~I  262 (412)
T KOG3881|consen  206 -----------------------TDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFI  262 (412)
T ss_pred             -----------------------ccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEE
Confidence                                   44566665  77899999999999999986654322222257889999999999999


Q ss_pred             EEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEE
Q psy15995        580 VASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQ  659 (683)
Q Consensus       580 ~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~  659 (683)
                      ++|...+.+..||+..+++.... +.+-.+.|+++..+|..++||+++-|..|||+|+++.+.+.....   .+.++.|.
T Consensus       263 y~gn~~g~l~~FD~r~~kl~g~~-~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYv---Ks~lt~il  338 (412)
T KOG3881|consen  263 YTGNTKGQLAKFDLRGGKLLGCG-LKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYV---KSRLTFIL  338 (412)
T ss_pred             EEecccchhheecccCceeeccc-cCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhh---hccccEEE
Confidence            99999999999999999887543 344789999999999999999999999999999999666555443   45677777


Q ss_pred             Ec
Q psy15995        660 WL  661 (683)
Q Consensus       660 ~~  661 (683)
                      +.
T Consensus       339 ~~  340 (412)
T KOG3881|consen  339 LR  340 (412)
T ss_pred             ec
Confidence            75

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.63  E-value=1.2e-13  Score=136.14  Aligned_cols=237  Identities=17%  Similarity=0.181  Sum_probs=156.7

Q ss_pred             ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCC-ceEEEEEEccCCCceeeeecCCcCeEEEEeecCC
Q psy15995        163 GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR-ERFGHVFMSETGTSVGEISGQSKPINSCDFKPSR  241 (683)
Q Consensus       163 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  241 (683)
                      ..|.+||.......   .+..+...+.+.+|+|||+.++.++... ...+.+++.+.++.. .+....+......|+|++
T Consensus       184 ~~l~i~D~~g~~~~---~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~g~~~~~~~SpDG  259 (433)
T PRK04922        184 YALQVADSDGYNPQ---TILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE-LVASFRGINGAPSFSPDG  259 (433)
T ss_pred             EEEEEECCCCCCce---EeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE-EeccCCCCccCceECCCC
Confidence            46899998654322   2334457789999999999999887443 334667777666543 334444555688999999


Q ss_pred             CeEEEEeeCCC--eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC-CCc--EEEEeCCCCeeEEeccCCccc
Q psy15995        242 PFRIITGSEDN--TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF-DGK--VFLYDGASADLVSELGNPAHK  316 (683)
Q Consensus       242 ~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~--i~iw~~~~~~~~~~~~~~~~~  316 (683)
                      +.++++.+.+|  .|.+||+.+++.. .+..+.......+|+|||+.|+..+. +|.  |+++++.+++..... .  +.
T Consensus       260 ~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt-~--~g  335 (433)
T PRK04922        260 RRLALTLSRDGNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLT-F--QG  335 (433)
T ss_pred             CEEEEEEeCCCCceEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEee-c--CC
Confidence            97556666665  5999998887654 44555555678899999998887653 444  777787776643332 2  33


Q ss_pred             cCeEEEEEccCCCEEEEEECCC---cEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecC---CcEEEEecCC
Q psy15995        317 GGVYAVAWKPDGTQLLTASGDK---TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS---GFISYLDVNN  390 (683)
Q Consensus       317 ~~i~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---g~i~~~~~~~  390 (683)
                      ......+|+|||+.++..+.++   .|.+||+.+++.. .+...  .......++++++.++..+..   +.+.+++...
T Consensus       336 ~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~--~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g  412 (433)
T PRK04922        336 NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPG--SLDESPSFAPNGSMVLYATREGGRGVLAAVSTDG  412 (433)
T ss_pred             CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCC--CCCCCceECCCCCEEEEEEecCCceEEEEEECCC
Confidence            3445789999999998876543   5999999887654 22221  123455788899988877664   3466666643


Q ss_pred             CCcceeeeeeccccEEEEEEeC
Q psy15995        391 PSTPIRVIKGHNKPITALALSP  412 (683)
Q Consensus       391 ~~~~~~~~~~~~~~v~~~~~~~  412 (683)
                        .....+..+.+.+...+|+|
T Consensus       413 --~~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        413 --RVRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             --CceEEcccCCCCCCCCccCC
Confidence              33344444555666677765

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.63  E-value=1.3e-13  Score=134.94  Aligned_cols=215  Identities=13%  Similarity=0.032  Sum_probs=141.8

Q ss_pred             CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec---CCccEEEEeccccceeeecccccc
Q psy15995        108 KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD---ISGKVRIWDTVNKEHILKNEFHPI  184 (683)
Q Consensus       108 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~  184 (683)
                      .|.+||........ +..+.              ..+...+|+|||+.|+..+   .+..|.+|++.+++......+.  
T Consensus       180 ~l~~~d~dg~~~~~-lt~~~--------------~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~--  242 (429)
T PRK03629        180 ELRVSDYDGYNQFV-VHRSP--------------QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP--  242 (429)
T ss_pred             eEEEEcCCCCCCEE-eecCC--------------CceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCC--
Confidence            68899887653322 11111              4678899999999988653   3457999999887643333332  


Q ss_pred             CCCeeEEEEcCCCCeEEEEec-CCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEE--cCCC
Q psy15995        185 GGPIKDIAWSPDNQRMVVVGE-GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVF--EGPP  261 (683)
Q Consensus       185 ~~~i~~~~~s~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw--~~~~  261 (683)
                       +....++|+|||+.|+.... ++...+++++.++++. ..+..+...+....|+|+++.++++...++...+|  +..+
T Consensus       243 -~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~-~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~  320 (429)
T PRK03629        243 -RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNING  320 (429)
T ss_pred             -CCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCE-EEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCC
Confidence             44567899999999988744 3333466667766654 34444556778999999999644444444554555  6655


Q ss_pred             CceeeeccccccCeEEEEECCCCCEEEEEcCC---CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC
Q psy15995        262 FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD---GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK  338 (683)
Q Consensus       262 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  338 (683)
                      ++.. .+..+........|+|||++++..+.+   ..|.+||+.+++... +..   ........|+|||+.|+..+.++
T Consensus       321 g~~~-~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~-Lt~---~~~~~~p~~SpDG~~i~~~s~~~  395 (429)
T PRK03629        321 GAPQ-RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LTD---TFLDETPSIAPNGTMVIYSSSQG  395 (429)
T ss_pred             CCeE-EeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEE-eCC---CCCCCCceECCCCCEEEEEEcCC
Confidence            5433 333344456678999999988876543   358889998886543 321   11234678999999999988776


Q ss_pred             c---EEEEECC
Q psy15995        339 T---CKLWDIE  346 (683)
Q Consensus       339 ~---i~iwd~~  346 (683)
                      .   +.++++.
T Consensus       396 ~~~~l~~~~~~  406 (429)
T PRK03629        396 MGSVLNLVSTD  406 (429)
T ss_pred             CceEEEEEECC
Confidence            4   5566664

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.61  E-value=2.1e-12  Score=117.48  Aligned_cols=348  Identities=14%  Similarity=0.121  Sum_probs=231.8

Q ss_pred             cCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCC---------------
Q psy15995         43 QRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISG---------------  107 (683)
Q Consensus        43 ~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg---------------  107 (683)
                      .......+.+||.|++|++..-..|.+|.-+....+..+. | ..|..+.|||+++||.+=+..+               
T Consensus        31 ~~~p~~~~~~SP~G~~l~~~~~~~V~~~~g~~~~~l~~~~-~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n  108 (561)
T COG5354          31 ENWPVAYVSESPLGTYLFSEHAAGVECWGGPSKAKLVRFR-H-PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKN  108 (561)
T ss_pred             cCcchhheeecCcchheehhhccceEEccccchhheeeee-c-CCceecccCcccceeeeeccCCccChhhccCCccccC
Confidence            3345667889999999999988899999988776555443 3 4689999999999999855433               


Q ss_pred             CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeecccccc-CC
Q psy15995        108 KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPI-GG  186 (683)
Q Consensus       108 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~  186 (683)
                      .+.+||..++..+..+...+...           ..-.-+.|+.+..|+|=. ....+.|+++ ++. +....+... ..
T Consensus       109 ~~~vwd~~sg~iv~sf~~~~q~~-----------~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n-~~~~p~~~lr~~  174 (561)
T COG5354         109 NVFVWDIASGMIVFSFNGISQPY-----------LGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDN-IEEHPFKNLRPV  174 (561)
T ss_pred             ceeEEeccCceeEeeccccCCcc-----------cccceeeeeecchhhhhh-ccCeEEEEec-CCc-cccCchhhcccc
Confidence            49999999999988887765221           122356788888877755 3457899997 322 112222222 26


Q ss_pred             CeeEEEEcCCCC--eEEEEe---cCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeC----------C
Q psy15995        187 PIKDIAWSPDNQ--RMVVVG---EGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSE----------D  251 (683)
Q Consensus       187 ~i~~~~~s~~~~--~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----------d  251 (683)
                      .+....|+|.++  .++.-.   .+......++....+..+..-.-....=..+.|.+.|+++++-.-.          .
T Consensus       175 gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfge  254 (561)
T COG5354         175 GILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGE  254 (561)
T ss_pred             ceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceecc
Confidence            788899999753  233332   1223334555555444444433333334567888888875443211          2


Q ss_pred             CeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEc--CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCC
Q psy15995        252 NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAG--FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGT  329 (683)
Q Consensus       252 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  329 (683)
                      .++.++++......... ...++|...+|.|.++.+++.+  .+..+.++|++.. ....+    ....=..+.|+|.++
T Consensus       255 snLyl~~~~e~~i~V~~-~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~----Pe~~rNT~~fsp~~r  328 (561)
T COG5354         255 SNLYLLRITERSIPVEK-DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYF----PEQKRNTIFFSPHER  328 (561)
T ss_pred             ceEEEEeecccccceec-cccccceeeeecccCCceeEEecccccceeecccccc-eEEec----CCcccccccccCccc
Confidence            46777877644333332 5678999999999998776554  6778999998766 44333    334456788999999


Q ss_pred             EEEEEECC---CcEEEEECCCCceee-EEEecCcceeceEEEEecCCEEEEEec------CCcEEEEecCCCCcceeeee
Q psy15995        330 QLLTASGD---KTCKLWDIETKSVVS-EFIMGNQVEDQQVSCLWQGDYLLTVSL------SGFISYLDVNNPSTPIRVIK  399 (683)
Q Consensus       330 ~l~~~~~d---g~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~------~g~i~~~~~~~~~~~~~~~~  399 (683)
                      +++.++-+   |.+.+||......+. .+.   ........++|+++++.+...      |..+.+||+....       
T Consensus       329 ~il~agF~nl~gni~i~~~~~rf~~~~~~~---~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~-------  398 (561)
T COG5354         329 YILFAGFDNLQGNIEIFDPAGRFKVAGAFN---GLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK-------  398 (561)
T ss_pred             EEEEecCCccccceEEeccCCceEEEEEee---cCCceEeeccCCceEEEecCCCcccccCcceEEEEecCch-------
Confidence            99997765   679999988765544 332   223344556778888777653      6678999987521       


Q ss_pred             eccccEEEEEEeCCCCEEEEEeCCC
Q psy15995        400 GHNKPITALALSPDRGTVFTGSHDG  424 (683)
Q Consensus       400 ~~~~~v~~~~~~~~~~~l~~~~~dg  424 (683)
                        ....+.+.|.|.+++..+.+.+.
T Consensus       399 --~fel~~~~W~p~~~~~ttsSs~~  421 (561)
T COG5354         399 --VFELTNITWDPSGQYVTTSSSCP  421 (561)
T ss_pred             --hhhhhhccccCCcccceeeccCC
Confidence              12567788999888777666554

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.61  E-value=6.9e-12  Score=119.38  Aligned_cols=274  Identities=18%  Similarity=0.192  Sum_probs=177.8

Q ss_pred             CCeEEEEeC--CCCcccccc-cCcccceEEEEECCCCcEEEEecC----CCCEEEEeCCCc-ccccccccccCCCCcccc
Q psy15995         64 GNSVIIRNI--ENPAISDIY-TEHSCAVNVAKYSPSGFYIASGDI----SGKVRIWDTVNK-EHILKNEFHPIGGPIKDI  135 (683)
Q Consensus        64 ~~~i~v~~~--~~~~~~~~~-~~h~~~v~~~~~s~d~~~las~~~----dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~  135 (683)
                      ++.|.+|.+  +++++...- ..-......++++|++++|.+...    ++.|..|++... ..+..+...+.       
T Consensus        12 ~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~-------   84 (345)
T PF10282_consen   12 GGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPS-------   84 (345)
T ss_dssp             STEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEE-------
T ss_pred             CCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeecc-------
Confidence            368888887  455443211 123456678999999999988765    568999888764 22222111110       


Q ss_pred             eeeeeecceeeeEeeccceEEEeec-CCccEEEEeccc-cceeeecc-c----------cccCCCeeEEEEcCCCCeEEE
Q psy15995        136 GTLLSLTSIRNILVLSIGFYIASGD-ISGKVRIWDTVN-KEHILKNE-F----------HPIGGPIKDIAWSPDNQRMVV  202 (683)
Q Consensus       136 ~~~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~iwd~~~-~~~~~~~~-~----------~~~~~~i~~~~~s~~~~~l~~  202 (683)
                          .......++++|++++|+++. .+|.|.++++.. +....... .          ........++.|+||++++++
T Consensus        85 ----~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v  160 (345)
T PF10282_consen   85 ----GGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYV  160 (345)
T ss_dssp             ----SSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEE
T ss_pred             ----CCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEE
Confidence                114556789999999988876 589999999987 33222111 1          112345789999999999999


Q ss_pred             EecCCceEEEEEEccCCC--ce--eeee-cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC--CCce--eeeccc---
Q psy15995        203 VGEGRERFGHVFMSETGT--SV--GEIS-GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP--PFKF--KMTKQE---  270 (683)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~--~~--~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~--~~~~~~---  270 (683)
                      ..-+.+. +.++.++...  ..  ..+. ......+.+.|+|++++..++...+++|.+++..  +++.  ......   
T Consensus       161 ~dlG~D~-v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~  239 (345)
T PF10282_consen  161 PDLGADR-VYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPE  239 (345)
T ss_dssp             EETTTTE-EEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCET
T ss_pred             EecCCCE-EEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccc
Confidence            8877665 6777776544  21  2222 3456688999999999877888889999999977  4332  121111   


Q ss_pred             ---cccCeEEEEECCCCCEEEEEcC-CCcEEEEeCC--CCee--EEeccCCccccCeEEEEEccCCCEEEEEEC-CCcEE
Q psy15995        271 ---HSRFVQAVRYSPSGSHFASAGF-DGKVFLYDGA--SADL--VSELGNPAHKGGVYAVAWKPDGTQLLTASG-DKTCK  341 (683)
Q Consensus       271 ---~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~--~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~  341 (683)
                         .......++++|||++|+++.. .+.|.+|++.  +++.  +..+..  .......++++|++++|+++.. ++.|.
T Consensus       240 ~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~--~G~~Pr~~~~s~~g~~l~Va~~~s~~v~  317 (345)
T PF10282_consen  240 GFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPT--GGKFPRHFAFSPDGRYLYVANQDSNTVS  317 (345)
T ss_dssp             TSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEE--SSSSEEEEEE-TTSSEEEEEETTTTEEE
T ss_pred             cccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeC--CCCCccEEEEeCCCCEEEEEecCCCeEE
Confidence               1225788999999998887664 5689999983  3333  333321  3445899999999999998874 56899


Q ss_pred             EEEC--CCCcee
Q psy15995        342 LWDI--ETKSVV  351 (683)
Q Consensus       342 iwd~--~~~~~~  351 (683)
                      +|++  +++.+.
T Consensus       318 vf~~d~~tG~l~  329 (345)
T PF10282_consen  318 VFDIDPDTGKLT  329 (345)
T ss_dssp             EEEEETTTTEEE
T ss_pred             EEEEeCCCCcEE
Confidence            8876  455543

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.60  E-value=2e-13  Score=134.03  Aligned_cols=187  Identities=16%  Similarity=0.179  Sum_probs=125.4

Q ss_pred             cceeeeEeeccceEEEeecCC---ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEec-CCceEEEEEEcc
Q psy15995        142 TSIRNILVLSIGFYIASGDIS---GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE-GRERFGHVFMSE  217 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-~~~~~~~~~~~~  217 (683)
                      ..+...+|+|||+.|+..+.+   ..|.+||+.+++.....   ...+.....+|+|||+.++.... ++.  ..+|..+
T Consensus       196 ~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~---~~~g~~~~~~~SPDG~~la~~~~~~g~--~~Iy~~d  270 (427)
T PRK02889        196 EPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVA---NFKGSNSAPAWSPDGRTLAVALSRDGN--SQIYTVN  270 (427)
T ss_pred             CCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEee---cCCCCccceEECCCCCEEEEEEccCCC--ceEEEEE
Confidence            557788999999999876643   45999999988653322   23356678999999999886543 333  3455443


Q ss_pred             -CCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcC--CCCceeeeccccccCeEEEEECCCCCEEEEEcCCC
Q psy15995        218 -TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG--PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDG  294 (683)
Q Consensus       218 -~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  294 (683)
                       .+.....+..+........|+|+|+.+++++..++...+|.+  .+++... +..+.......+|+|+|++++..+.++
T Consensus       271 ~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~-lt~~g~~~~~~~~SpDG~~Ia~~s~~~  349 (427)
T PRK02889        271 ADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQR-VTFTGSYNTSPRISPDGKLLAYISRVG  349 (427)
T ss_pred             CCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEE-EecCCCCcCceEECCCCCEEEEEEccC
Confidence             233345566666667788999999974555545566666654  4443322 222223345678999999998776554


Q ss_pred             ---cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC
Q psy15995        295 ---KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK  338 (683)
Q Consensus       295 ---~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  338 (683)
                         .|.+||+.+++......    ........|+||++.|+..+.++
T Consensus       350 g~~~I~v~d~~~g~~~~lt~----~~~~~~p~~spdg~~l~~~~~~~  392 (427)
T PRK02889        350 GAFKLYVQDLATGQVTALTD----TTRDESPSFAPNGRYILYATQQG  392 (427)
T ss_pred             CcEEEEEEECCCCCeEEccC----CCCccCceECCCCCEEEEEEecC
Confidence               69999998887554332    22346789999999988877644

>KOG1409|consensus

Probab=99.60  E-value=8.3e-13  Score=113.81  Aligned_cols=339  Identities=17%  Similarity=0.240  Sum_probs=220.6

Q ss_pred             CCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCc-ccccccccccCCCCcccceeeeeecceeeeEeecc
Q psy15995         74 NPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNK-EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI  152 (683)
Q Consensus        74 ~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  152 (683)
                      ...+++.++||.+.|++...-|-..-+++.+.|.+++||--.+. +.-..+. +            .-..+++++.+.+.
T Consensus        13 kp~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~-~------------~mP~~~~~~~y~~e   79 (404)
T KOG1409|consen   13 KPELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIY-H------------YMPSPCSAMEYVSE   79 (404)
T ss_pred             chhhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhh-h------------hCCCCceEeeeecc
Confidence            44567789999999999999997778999999999999964332 2111111 1            11267889999999


Q ss_pred             ceEEEeecCCccEEEEecccc--ceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCc
Q psy15995        153 GFYIASGDISGKVRIWDTVNK--EHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSK  230 (683)
Q Consensus       153 ~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (683)
                      ...|++|-..|++.-+.+...  +.........|..++..+.|+-..+.+++.+.+.....  .-.+.+..+....-.. 
T Consensus        80 ~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~--hc~e~~~~lg~Y~~~~-  156 (404)
T KOG1409|consen   80 SRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAW--HCTESGNRLGGYNFET-  156 (404)
T ss_pred             ceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEE--EeeccCCcccceEeec-
Confidence            999999999999988876542  22334456678899999999999999988887764322  2223333222211000 


Q ss_pred             CeEEEEeecCCCeEEEEeeCCCeEEEEc--CCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy15995        231 PINSCDFKPSRPFRIITGSEDNTIAVFE--GPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVS  308 (683)
Q Consensus       231 ~v~~~~~~~~~~~~l~~~~~d~~i~iw~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~  308 (683)
                      .-+++.+.-.   ....|...|.|.+-.  ......+..+.+|.+.+.+++|.+....|.+|..|..+.+||+...+.+.
T Consensus       157 ~~t~~~~d~~---~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~  233 (404)
T KOG1409|consen  157 PASALQFDAL---YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTA  233 (404)
T ss_pred             cCCCCceeeE---EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCccee
Confidence            0001111111   134444455554443  34455677889999999999999999999999999999999987654433


Q ss_pred             -eccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeE-EEecCc---------------------------
Q psy15995        309 -ELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSE-FIMGNQ---------------------------  359 (683)
Q Consensus       309 -~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~---------------------------  359 (683)
                       .+.  +|...|..+...+--+.+++++.||.|.+|++........ +.....                           
T Consensus       234 ~el~--gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~  311 (404)
T KOG1409|consen  234 YELQ--GHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHH  311 (404)
T ss_pred             eeec--cchhhhhhhhhhhhheeeeeccCCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhh
Confidence             333  4899999999988889999999999999999975443211 100000                           


Q ss_pred             ----ceeceEEEEecCCEEEEEecCCcEEEEecCC------CCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEE
Q psy15995        360 ----VEDQQVSCLWQGDYLLTVSLSGFISYLDVNN------PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRW  429 (683)
Q Consensus       360 ----~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w  429 (683)
                          ....+..++.+.......+..-.+++.|.-.      ...++.....-...|+.+.+...-.+|++++.|..|++|
T Consensus       312 crkcg~avc~~c~s~~~~~p~mg~e~~vR~~~~c~~~i~~~~~t~LA~phei~tgItamhlqetlglLvTsG~~Rvi~iw  391 (404)
T KOG1409|consen  312 CRKCGKAVCGKCSSNRSSYPTMGFEFSVRVCDSCYPTIKDEERTPLAIPHEIKTGITAMHLQETLGLLVTSGTDRVIKIW  391 (404)
T ss_pred             hhhhhhhcCcccccCccccccccceeEEEEecccchhhhcCCCCccccccccccceeEEEhhhhccceeecCCceEEEEE
Confidence                0001111111111222222222344433211      123344444445578999988888999999999999999


Q ss_pred             cCCC
Q psy15995        430 NAKT  433 (683)
Q Consensus       430 ~~~~  433 (683)
                      |++.
T Consensus       392 d~~~  395 (404)
T KOG1409|consen  392 DVRS  395 (404)
T ss_pred             echh
Confidence            9864

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.59  E-value=8.6e-12  Score=114.56  Aligned_cols=270  Identities=13%  Similarity=0.029  Sum_probs=172.8

Q ss_pred             CeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecC----------CCCEEEEeCCCcccccccccccCCCCccc
Q psy15995         65 NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDI----------SGKVRIWDTVNKEHILKNEFHPIGGPIKD  134 (683)
Q Consensus        65 ~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  134 (683)
                      +.|.|.|.++++.+..+..-..+- .+ +||||+.|..+..          +..|.+||..+.+.+.++...+.....  
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~--  102 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFL--  102 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhh--
Confidence            789999999999888777443333 24 9999998876644          678999999999998887765321100  


Q ss_pred             ceeeeeecceeeeEeeccceEEEeec-C-CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEE
Q psy15995        135 IGTLLSLTSIRNILVLSIGFYIASGD-I-SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH  212 (683)
Q Consensus       135 ~~~~~~~~~i~~~~~s~~~~~l~~~~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~  212 (683)
                           .......++++|||++|++.. . +..|.+.|+.+++.+.....+.   ...-...+++. ..+.+.++..  ..
T Consensus       103 -----~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~---~~~vy~t~e~~-~~~~~~Dg~~--~~  171 (352)
T TIGR02658       103 -----VGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD---CYHIFPTANDT-FFMHCRDGSL--AK  171 (352)
T ss_pred             -----ccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC---CcEEEEecCCc-cEEEeecCce--EE
Confidence                 113445789999999998766 3 6899999999998776665432   22222222222 2222222211  11


Q ss_pred             EEEccCCCce-ee---eecCCcCeE-EEEeec-CCCeEEEEeeCCCeEEEEcCCCC-----ceeeecc-------ccccC
Q psy15995        213 VFMSETGTSV-GE---ISGQSKPIN-SCDFKP-SRPFRIITGSEDNTIAVFEGPPF-----KFKMTKQ-------EHSRF  274 (683)
Q Consensus       213 ~~~~~~~~~~-~~---~~~~~~~v~-~~~~~~-~~~~~l~~~~~d~~i~iw~~~~~-----~~~~~~~-------~~~~~  274 (683)
                      +-.-+.|+.. ..   +.+...++. .-.|.+ ++.. +....+ |+|.+.|+...     +....+.       -....
T Consensus       172 v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~-~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g  249 (352)
T TIGR02658       172 VGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRL-VWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGG  249 (352)
T ss_pred             EEecCCCceEEeeeeeecCCccccccCCceEcCCCcE-EEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCc
Confidence            1111222211 00   111001110 014456 6764 444444 99999995332     2222211       12334


Q ss_pred             eEEEEECCCCCEEEEEc----------CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCC-EEEEEE-CCCcEEE
Q psy15995        275 VQAVRYSPSGSHFASAG----------FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGT-QLLTAS-GDKTCKL  342 (683)
Q Consensus       275 v~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~-~dg~i~i  342 (683)
                      ..-++++++++.+++..          ..+.|.++|..+++.+..+.   -...+..++++||++ +|++.. .++.|.+
T Consensus       250 ~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~---vG~~~~~iavS~Dgkp~lyvtn~~s~~VsV  326 (352)
T TIGR02658       250 WQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIE---LGHEIDSINVSQDAKPLLYALSTGDKTLYI  326 (352)
T ss_pred             ceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEe---CCCceeeEEECCCCCeEEEEeCCCCCcEEE
Confidence            45599999999887743          12579999999999999886   356899999999999 887766 5788999


Q ss_pred             EECCCCceeeEE
Q psy15995        343 WDIETKSVVSEF  354 (683)
Q Consensus       343 wd~~~~~~~~~~  354 (683)
                      +|..+++.+.++
T Consensus       327 iD~~t~k~i~~i  338 (352)
T TIGR02658       327 FDAETGKELSSV  338 (352)
T ss_pred             EECcCCeEEeee
Confidence            999999988876

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.59  E-value=4.3e-11  Score=105.00  Aligned_cols=305  Identities=12%  Similarity=0.123  Sum_probs=191.2

Q ss_pred             CCeEEEEcCCCCc--e-eeeccccccCeEEEEECCCCCEEEEEcCC---CcEEEEeCCC--CeeEEeccCCccccCeEEE
Q psy15995        251 DNTIAVFEGPPFK--F-KMTKQEHSRFVQAVRYSPSGSHFASAGFD---GKVFLYDGAS--ADLVSELGNPAHKGGVYAV  322 (683)
Q Consensus       251 d~~i~iw~~~~~~--~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~--~~~~~~~~~~~~~~~i~~~  322 (683)
                      +.-|.+|++.+..  . ...+-.+...++-++|+|+++.|.++..+   |.|..|.+..  |+....-.......+.+.+
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv   94 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV   94 (346)
T ss_pred             CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence            5679999876322  1 11223466778999999999999887654   6777776654  5443332222244455899


Q ss_pred             EEccCCCEEEEEEC-CCcEEEEECCCCceeeEE-EecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeee
Q psy15995        323 AWKPDGTQLLTASG-DKTCKLWDIETKSVVSEF-IMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKG  400 (683)
Q Consensus       323 ~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~  400 (683)
                      ++++++++++++.. .|.|.++-++....+... ....                            +..  ..+ . .+.
T Consensus        95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~----------------------------h~g--~~p-~-~rQ  142 (346)
T COG2706          95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVK----------------------------HTG--SGP-H-ERQ  142 (346)
T ss_pred             EECCCCCEEEEEEccCceEEEEEcccCCccccceeeee----------------------------cCC--CCC-C-ccc
Confidence            99999999988865 577888888653222211 0000                            000  000 0 011


Q ss_pred             ccccEEEEEEeCCCCEEEEEeC-CCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccC
Q psy15995        401 HNKPITALALSPDRGTVFTGSH-DGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSG  479 (683)
Q Consensus       401 ~~~~v~~~~~~~~~~~l~~~~~-dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~  479 (683)
                      ....+....+.|++++|++.+- .-.|.+|++..+.......                                      
T Consensus       143 ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~--------------------------------------  184 (346)
T COG2706         143 ESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADP--------------------------------------  184 (346)
T ss_pred             cCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccc--------------------------------------
Confidence            1222677889999999998754 2358888887554432211                                      


Q ss_pred             CceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcC-CCcEEEEEcCCC--ccC
Q psy15995        480 PEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGA-DSKVHIYELNNK--SLS  556 (683)
Q Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~--~~~  556 (683)
                                                          ..++....++.+.|+|++++..+.++ +++|.+|..+..  ++.
T Consensus       185 ------------------------------------~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~  228 (346)
T COG2706         185 ------------------------------------AEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFE  228 (346)
T ss_pred             ------------------------------------cccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEE
Confidence                                                01123446789999999999888776 889999999874  222


Q ss_pred             ccee-------ecCCcCeeEEEECCCCCEEEEEeC-CCeEEEEECCC--CccccccceeeecccEEEEEecCCCCeEEEe
Q psy15995        557 PKAE-------LDHLGPVTDCSFSPSNEYLVASDA-HRKVVLYRVPD--FELAHNKEWGFHSAKVNCVAWSPDSALVASG  626 (683)
Q Consensus       557 ~~~~-------~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~~~~~--~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~  626 (683)
                      ....       ........++..++||++|.++.. ...|.+|.+..  +++........+......+.|+|+|++|+++
T Consensus       229 ~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa  308 (346)
T COG2706         229 ELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAA  308 (346)
T ss_pred             EeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEE
Confidence            1111       123456778999999999998763 34788888763  4443333332244557899999999999998


Q ss_pred             ecCC-cEEEEeCCCCceeeEeec-CCCCCCeeEEEEc
Q psy15995        627 SLDT-TIIIWSLASPAKHIIIKN-AHPQSQITRLQWL  661 (683)
Q Consensus       627 ~~d~-~v~iw~~~~~~~~~~~~~-~~~~~~v~~l~~~  661 (683)
                      .+++ +|.+|.++...-.+.... ........+|.|.
T Consensus       309 ~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f~  345 (346)
T COG2706         309 NQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKFL  345 (346)
T ss_pred             ccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEEc
Confidence            8765 688888775544433322 1124455666653

>KOG1354|consensus

Probab=99.58  E-value=2.1e-13  Score=117.41  Aligned_cols=263  Identities=16%  Similarity=0.208  Sum_probs=179.4

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEEeCCCccc---ccccccccCCCCcccceeeeeecceeeeEeeccce--EEEe
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH---ILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF--YIAS  158 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~  158 (683)
                      -.+-|.++.|..+|.+||+|+.+|.|.++.-.....   .....++.+.....-..++.-...|..+.|.+++.  .++.
T Consensus        24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl  103 (433)
T KOG1354|consen   24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL  103 (433)
T ss_pred             hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence            456789999999999999999999999997554322   11112223333334445555567899999999765  5666


Q ss_pred             ecCCccEEEEeccccceee----------------------------------eccccccCCCeeEEEEcCCCCeEEEEe
Q psy15995        159 GDISGKVRIWDTVNKEHIL----------------------------------KNEFHPIGGPIKDIAWSPDNQRMVVVG  204 (683)
Q Consensus       159 ~~~d~~i~iwd~~~~~~~~----------------------------------~~~~~~~~~~i~~~~~s~~~~~l~~~~  204 (683)
                      .+.|.+|++|.+.......                                  +.-..+|.--|.++.++.|++.++++.
T Consensus       104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSAD  183 (433)
T KOG1354|consen  104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSAD  183 (433)
T ss_pred             ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeecc
Confidence            7789999999986532111                                  001123555789999999999988866


Q ss_pred             cCCceEEEEEEccCCCc---eeeeecC-----CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceee----e-----
Q psy15995        205 EGRERFGHVFMSETGTS---VGEISGQ-----SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM----T-----  267 (683)
Q Consensus       205 ~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~----~-----  267 (683)
                      .-+   +.+|..+.-..   +..++.+     ..-|++..|+|.....++-.+..|+|++-|++...+.-    .     
T Consensus       184 dLR---INLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepe  260 (433)
T KOG1354|consen  184 DLR---INLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPE  260 (433)
T ss_pred             cee---eeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhcccc
Confidence            543   56666653221   2222332     35688999999988889999999999999987432211    0     


Q ss_pred             -------ccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCC-CCeeEEeccCCc----------cccC---eEEEEEcc
Q psy15995        268 -------KQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGA-SADLVSELGNPA----------HKGG---VYAVAWKP  326 (683)
Q Consensus       268 -------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~~----------~~~~---i~~~~~~~  326 (683)
                             +.+--..|..+.|+++|+++++-+. -+|++||+. ..+++..+....          ....   -..++|+.
T Consensus       261 dp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg  339 (433)
T KOG1354|consen  261 DPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSG  339 (433)
T ss_pred             CCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcC
Confidence                   1112346889999999999988663 689999984 344444443200          1122   24678998


Q ss_pred             CCCEEEEEECCCcEEEEECCCCce
Q psy15995        327 DGTQLLTASGDKTCKLWDIETKSV  350 (683)
Q Consensus       327 ~~~~l~~~~~dg~i~iwd~~~~~~  350 (683)
                      ++..+++|+....+++++...+..
T Consensus       340 ~~~~v~TGsy~n~frvf~~~~gsk  363 (433)
T KOG1354|consen  340 NDSYVMTGSYNNVFRVFNLARGSK  363 (433)
T ss_pred             CcceEecccccceEEEecCCCCcc
Confidence            999999999999999999766543

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.58  E-value=3.3e-11  Score=105.68  Aligned_cols=271  Identities=13%  Similarity=0.134  Sum_probs=183.5

Q ss_pred             CCeEEEEeCCCCc--c-cccccCcccceEEEEECCCCcEEEEecC---CCCEEEEeCCC--cccccccccccCCCCcccc
Q psy15995         64 GNSVIIRNIENPA--I-SDIYTEHSCAVNVAKYSPSGFYIASGDI---SGKVRIWDTVN--KEHILKNEFHPIGGPIKDI  135 (683)
Q Consensus        64 ~~~i~v~~~~~~~--~-~~~~~~h~~~v~~~~~s~d~~~las~~~---dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~  135 (683)
                      +..|++|++.+.+  + ...+-.+.+.++-|+|+|++++|.++-.   +|.|.-+.+..  |++-........       
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~-------   87 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLP-------   87 (346)
T ss_pred             CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccC-------
Confidence            6789999988432  2 1123357889999999999999988754   46787777765  432221111111       


Q ss_pred             eeeeeecceeeeEeeccceEEEeecC-CccEEEEeccc-cceeeeccccccCCC----------eeEEEEcCCCCeEEEE
Q psy15995        136 GTLLSLTSIRNILVLSIGFYIASGDI-SGKVRIWDTVN-KEHILKNEFHPIGGP----------IKDIAWSPDNQRMVVV  203 (683)
Q Consensus       136 ~~~~~~~~i~~~~~s~~~~~l~~~~~-d~~i~iwd~~~-~~~~~~~~~~~~~~~----------i~~~~~s~~~~~l~~~  203 (683)
                           ..+...++++++|++|+++.. .|.|.++-+.. |..........|.++          +....|.|++++|++.
T Consensus        88 -----g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~  162 (346)
T COG2706          88 -----GSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVP  162 (346)
T ss_pred             -----CCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEe
Confidence                 134478999999999988765 58899999865 433322233333344          8889999999999999


Q ss_pred             ecCCceEEEEEEccCCCceeee---ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC-ceeeeccc---------
Q psy15995        204 GEGRERFGHVFMSETGTSVGEI---SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF-KFKMTKQE---------  270 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~---------  270 (683)
                      .-+.++ +.+++.+.|+....-   -.....-+.+.|+|++++..+..--+++|.+|..+.. .....++.         
T Consensus       163 DLG~Dr-i~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~  241 (346)
T COG2706         163 DLGTDR-IFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFT  241 (346)
T ss_pred             ecCCce-EEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccC
Confidence            877776 677887766543321   1345567899999999987777777999999987663 22222221         


Q ss_pred             cccCeEEEEECCCCCEEEEEcC-CCcEEEEeCCC--CeeEEeccCCccccCeEEEEEccCCCEEEEEECC-CcEEEEECC
Q psy15995        271 HSRFVQAVRYSPSGSHFASAGF-DGKVFLYDGAS--ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD-KTCKLWDIE  346 (683)
Q Consensus       271 ~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g~i~iwd~~  346 (683)
                      ......++.+++||++|.++.+ ...|.++.+..  +++...-..+.+........+++.+++|+++..+ ..+.+|...
T Consensus       242 g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d  321 (346)
T COG2706         242 GTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERD  321 (346)
T ss_pred             CCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEc
Confidence            2346778999999999998865 23677776543  3332222222244557889999999999988765 457777665


Q ss_pred             C
Q psy15995        347 T  347 (683)
Q Consensus       347 ~  347 (683)
                      .
T Consensus       322 ~  322 (346)
T COG2706         322 K  322 (346)
T ss_pred             C
Confidence            3

>KOG3881|consensus

Probab=99.57  E-value=4.9e-13  Score=117.32  Aligned_cols=248  Identities=13%  Similarity=0.112  Sum_probs=177.0

Q ss_pred             CCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCcee------eeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcC
Q psy15995        186 GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVG------EISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG  259 (683)
Q Consensus       186 ~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~  259 (683)
                      ..+.+++|.-|++.=+......+.....+.........      .......+|..+.....   .|++|-.+|.+.+|..
T Consensus        56 ~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~dg---~Litc~~sG~l~~~~~  132 (412)
T KOG3881|consen   56 DRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLADG---TLITCVSSGNLQVRHD  132 (412)
T ss_pred             hhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhcCC---EEEEEecCCcEEEEec
Confidence            56777888776654443333222112333333322222      23344556666665544   4999999999999987


Q ss_pred             CCCc----eeeeccccccCeEEEEECCCCC-EEEEEcCC--CcEEEEeCCCCeeEEeccCCc-------cccCeEEEEEc
Q psy15995        260 PPFK----FKMTKQEHSRFVQAVRYSPSGS-HFASAGFD--GKVFLYDGASADLVSELGNPA-------HKGGVYAVAWK  325 (683)
Q Consensus       260 ~~~~----~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~-------~~~~i~~~~~~  325 (683)
                      ..+.    .+..+..+ ..+..+.-++..+ .+++|+..  ..+.+||++..+.+..-....       -.-.++++.|.
T Consensus       133 k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl  211 (412)
T KOG3881|consen  133 KSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFL  211 (412)
T ss_pred             cCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceec
Confidence            6332    22222222 4466677677665 45568887  789999999887666654322       12356788898


Q ss_pred             cC--CCEEEEEECCCcEEEEECCCCc-eeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeecc
Q psy15995        326 PD--GTQLLTASGDKTCKLWDIETKS-VVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHN  402 (683)
Q Consensus       326 ~~--~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~  402 (683)
                      +.  ...|++++.-+.+++||.+.++ ++..+. ........+...|+++.++++...|.+..||.+.+......+.+-.
T Consensus       212 ~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd-~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~t  290 (412)
T KOG3881|consen  212 EGSPNYKFATITRYHQVRLYDTRHQRRPVAQFD-FLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGIT  290 (412)
T ss_pred             CCCCCceEEEEecceeEEEecCcccCcceeEec-cccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCcc
Confidence            87  8899999999999999999765 344443 3355667788889999999999999999999999777777788999


Q ss_pred             ccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcce
Q psy15995        403 KPITALALSPDRGTVFTGSHDGFITRWNAKTGENDR  438 (683)
Q Consensus       403 ~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~  438 (683)
                      +.|+++..+|.++++++++-|..|+|+|+.+.+.+.
T Consensus       291 Gsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~  326 (412)
T KOG3881|consen  291 GSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLH  326 (412)
T ss_pred             CCcceEEEcCCCceEEeeccceeEEEeecccchhhh
Confidence            999999999999999999999999999999865543

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.56  E-value=2.6e-12  Score=125.21  Aligned_cols=251  Identities=9%  Similarity=0.023  Sum_probs=156.5

Q ss_pred             CCeEEEec----------CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEE---EecCCC--CEEEEeCCCcccc
Q psy15995         56 GKNFLYTN----------GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIA---SGDISG--KVRIWDTVNKEHI  120 (683)
Q Consensus        56 ~~~l~~~~----------~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~la---s~~~dg--~i~iwd~~~~~~~  120 (683)
                      ++.+||..          ...|.+.|.+.+.... +......+..-+|||||+.++   +...+|  .|.+.++.+++..
T Consensus       146 ~~~iayv~~~~~~~~~~~~~~l~~~d~dG~~~~~-lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~  224 (428)
T PRK01029        146 SGKIIFSLSTTNSDTELKQGELWSVDYDGQNLRP-LTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGK  224 (428)
T ss_pred             cCEEEEEEeeCCcccccccceEEEEcCCCCCceE-cccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCce
Confidence            56677652          1378888887776543 555666778899999997532   444444  5888888877533


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC-----CccEEEEeccccc--eeeeccccccCCCeeEEEE
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI-----SGKVRIWDTVNKE--HILKNEFHPIGGPIKDIAW  193 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----d~~i~iwd~~~~~--~~~~~~~~~~~~~i~~~~~  193 (683)
                      ......               ......+|||||+.||..+.     +-.+.+|++..+.  ..... .....+.....+|
T Consensus       225 ~lt~~~---------------g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~l-t~~~~~~~~~p~w  288 (428)
T PRK01029        225 KILALQ---------------GNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRL-LNEAFGTQGNPSF  288 (428)
T ss_pred             EeecCC---------------CCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEe-ecCCCCCcCCeEE
Confidence            222111               22345789999998886543     2234457776531  11111 1111234467899


Q ss_pred             cCCCCeEEEEecCC-ceEEEEEEccC-CCceeeeecCCcCeEEEEeecCCCeEEEEeeCC--CeEEEEcCCCCceeeecc
Q psy15995        194 SPDNQRMVVVGEGR-ERFGHVFMSET-GTSVGEISGQSKPINSCDFKPSRPFRIITGSED--NTIAVFEGPPFKFKMTKQ  269 (683)
Q Consensus       194 s~~~~~l~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~  269 (683)
                      +|||+.|+..+... ...+.++..+. +.....+..+...+....|+|+|+.++++...+  ..|.+||+.+++......
T Consensus       289 SPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~  368 (428)
T PRK01029        289 SPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTT  368 (428)
T ss_pred             CCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccC
Confidence            99999998877532 22233333332 333455555666778899999999744444433  468999998887654332


Q ss_pred             ccccCeEEEEECCCCCEEEEEcC---CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccC
Q psy15995        270 EHSRFVQAVRYSPSGSHFASAGF---DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPD  327 (683)
Q Consensus       270 ~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~  327 (683)
                       ....+....|+|||+.|+....   ...|+++|+.+++......   ..+.+...+|+|-
T Consensus       369 -~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~---~~g~~~~p~Ws~~  425 (428)
T PRK01029        369 -SPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVI---GSGEKRFPSWGAF  425 (428)
T ss_pred             -CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec---CCCcccCceecCC
Confidence             3345678999999998775432   3568889988877654443   3445667788774

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.56  E-value=3.5e-11  Score=110.55  Aligned_cols=276  Identities=15%  Similarity=0.080  Sum_probs=175.7

Q ss_pred             CCcEEEEecCC-----CCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC---------
Q psy15995         96 SGFYIASGDIS-----GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI---------  161 (683)
Q Consensus        96 d~~~las~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------  161 (683)
                      +++++......     ++|.+.|..+.+.+..+....               ....+ ++|||+.|.++..         
T Consensus        11 ~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~---------------~P~~~-~spDg~~lyva~~~~~R~~~G~   74 (352)
T TIGR02658        11 DARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGF---------------LPNPV-VASDGSFFAHASTVYSRIARGK   74 (352)
T ss_pred             CCCEEEEECCcccccCceEEEEECCCCEEEEEEEccC---------------CCcee-ECCCCCEEEEEeccccccccCC
Confidence            45555444332     789999999988777666542               22334 9999998877655         


Q ss_pred             -CccEEEEeccccceeeecccccc-----CCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEE
Q psy15995        162 -SGKVRIWDTVNKEHILKNEFHPI-----GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSC  235 (683)
Q Consensus       162 -d~~i~iwd~~~~~~~~~~~~~~~-----~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  235 (683)
                       +..|.+||..+.+.+........     ......++++|||+++++...+....+.+.+..+++.+.++.-.. ...-.
T Consensus        75 ~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~-~~~vy  153 (352)
T TIGR02658        75 RTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD-CYHIF  153 (352)
T ss_pred             CCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC-CcEEE
Confidence             78899999999988766665432     223458999999999999987767778999999999988876522 11111


Q ss_pred             --------EeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeE-EEEECC-CCCEEEEEcCCCcEEEEeCCCC-
Q psy15995        236 --------DFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQ-AVRYSP-SGSHFASAGFDGKVFLYDGASA-  304 (683)
Q Consensus       236 --------~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~-~~~~~~-~~~~l~~~~~dg~i~iw~~~~~-  304 (683)
                              ..+.|+....++-..+|....=+      ...+.....++. .-.|.+ +|+++.+... |+|.+.|+... 
T Consensus       154 ~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~------~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~  226 (352)
T TIGR02658       154 PTANDTFFMHCRDGSLAKVGYGTKGNPKIKP------TEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGD  226 (352)
T ss_pred             EecCCccEEEeecCceEEEEecCCCceEEee------eeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCc
Confidence                    22333333222233333311000      000111000000 003455 8887777775 99999995443 


Q ss_pred             ----eeEEeccCC-----ccccCeEEEEEccCCCEEEEEEC----------CCcEEEEECCCCceeeEEEecCcceeceE
Q psy15995        305 ----DLVSELGNP-----AHKGGVYAVAWKPDGTQLLTASG----------DKTCKLWDIETKSVVSEFIMGNQVEDQQV  365 (683)
Q Consensus       305 ----~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  365 (683)
                          +....+...     -..+...-++++++++++++...          .+.|.++|..+++.+..+..         
T Consensus       227 ~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v---------  297 (352)
T TIGR02658       227 AKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL---------  297 (352)
T ss_pred             ceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC---------
Confidence                222222110     02334455999999998887532          14688888877776655422         


Q ss_pred             EEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCC-EEEEEe-CCCcEEEEcCCCCCcceec
Q psy15995        366 SCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRG-TVFTGS-HDGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       366 ~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~~w~~~~~~~~~~~  440 (683)
                                                          ...+..++++||++ +|++.. .++.|.+.|..+++.+...
T Consensus       298 ------------------------------------G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i  338 (352)
T TIGR02658       298 ------------------------------------GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV  338 (352)
T ss_pred             ------------------------------------CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence                                                33678899999999 777666 5788999999998887766

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.56  E-value=2.2e-12  Score=127.47  Aligned_cols=219  Identities=12%  Similarity=0.057  Sum_probs=145.9

Q ss_pred             CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC---CccEEEEeccccceeeecccccc
Q psy15995        108 KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI---SGKVRIWDTVNKEHILKNEFHPI  184 (683)
Q Consensus       108 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~  184 (683)
                      .|.+||..... ...+..+.              ..+....|+|||+.|+..+.   +..|.+||+.+++...   +...
T Consensus       183 ~l~~~d~dg~~-~~~lt~~~--------------~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~---l~~~  244 (435)
T PRK05137        183 RLAIMDQDGAN-VRYLTDGS--------------SLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQREL---VGNF  244 (435)
T ss_pred             EEEEECCCCCC-cEEEecCC--------------CCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEE---eecC
Confidence            68888875442 22222222              56888999999999888653   4689999998886432   2334


Q ss_pred             CCCeeEEEEcCCCCeEEEEec-CCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCC--eEEEEcCCC
Q psy15995        185 GGPIKDIAWSPDNQRMVVVGE-GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDN--TIAVFEGPP  261 (683)
Q Consensus       185 ~~~i~~~~~s~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~i~iw~~~~  261 (683)
                      .+.+...+|+|||+.++.... ++...+++++.+++. ...+..+........|+|+++.++++...+|  .|.++|...
T Consensus       245 ~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g  323 (435)
T PRK05137        245 PGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT-TTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADG  323 (435)
T ss_pred             CCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCc-eEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCC
Confidence            467788999999998876543 333334555555554 3556666667788999999997444443444  677888766


Q ss_pred             CceeeeccccccCeEEEEECCCCCEEEEEcCC---CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECC-
Q psy15995        262 FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD---GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD-  337 (683)
Q Consensus       262 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-  337 (683)
                      ++... +..+...+....|+|+|+.|+....+   ..|.+||+.++.. ..+.   ....+....|+|||+.|+..+.+ 
T Consensus       324 ~~~~~-lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt---~~~~~~~p~~spDG~~i~~~~~~~  398 (435)
T PRK05137        324 SNPRR-ISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT---SGFLVEGPTWAPNGRVIMFFRQTP  398 (435)
T ss_pred             CCeEE-eecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Eecc---CCCCCCCCeECCCCCEEEEEEccC
Confidence            55433 33344556778999999998876543   3688889765543 3333   22346788999999998776543 


Q ss_pred             -----CcEEEEECCCCce
Q psy15995        338 -----KTCKLWDIETKSV  350 (683)
Q Consensus       338 -----g~i~iwd~~~~~~  350 (683)
                           ..+.++|+..+..
T Consensus       399 ~~~~~~~L~~~dl~g~~~  416 (435)
T PRK05137        399 GSGGAPKLYTVDLTGRNE  416 (435)
T ss_pred             CCCCcceEEEEECCCCce
Confidence                 2477777765443

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.55  E-value=1.1e-12  Score=112.19  Aligned_cols=159  Identities=22%  Similarity=0.386  Sum_probs=116.2

Q ss_pred             eeEEEEcCCCCeEEEEecCC---c-----eEEEEEEcc-CCCceeeeec-CCcCeEEEEeecCCCeEE-EEeeCCCeEEE
Q psy15995        188 IKDIAWSPDNQRMVVVGEGR---E-----RFGHVFMSE-TGTSVGEISG-QSKPINSCDFKPSRPFRI-ITGSEDNTIAV  256 (683)
Q Consensus       188 i~~~~~s~~~~~l~~~~~~~---~-----~~~~~~~~~-~~~~~~~~~~-~~~~v~~~~~~~~~~~~l-~~~~~d~~i~i  256 (683)
                      -..+.|+|+|++|++....+   .     ....++.++ .+.....+.- ..++|.+++|+|+++..+ +.|..++.|.+
T Consensus         8 ~~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~l   87 (194)
T PF08662_consen    8 DAKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTL   87 (194)
T ss_pred             eEEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEE
Confidence            35688999999988876521   0     113444443 3344555543 345799999999998633 33556789999


Q ss_pred             EcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC---CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEE
Q psy15995        257 FEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF---DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLT  333 (683)
Q Consensus       257 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  333 (683)
                      ||.+ .+.+..+.  ...+..+.|+|+|++|++++.   .|.|.+||.++.+.+....   | ..+..++|+|+|++|++
T Consensus        88 yd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~---~-~~~t~~~WsPdGr~~~t  160 (194)
T PF08662_consen   88 YDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE---H-SDATDVEWSPDGRYLAT  160 (194)
T ss_pred             EcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc---c-CcEEEEEEcCCCCEEEE
Confidence            9986 55555553  567789999999999998864   4679999999988887764   3 35789999999999999


Q ss_pred             EEC------CCcEEEEECCCCceeeEE
Q psy15995        334 ASG------DKTCKLWDIETKSVVSEF  354 (683)
Q Consensus       334 ~~~------dg~i~iwd~~~~~~~~~~  354 (683)
                      +..      |+.++||+.. |+.+.+.
T Consensus       161 a~t~~r~~~dng~~Iw~~~-G~~l~~~  186 (194)
T PF08662_consen  161 ATTSPRLRVDNGFKIWSFQ-GRLLYKK  186 (194)
T ss_pred             EEeccceeccccEEEEEec-CeEeEec
Confidence            864      6779999986 5555443

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.55  E-value=6e-13  Score=113.73  Aligned_cols=148  Identities=22%  Similarity=0.395  Sum_probs=108.3

Q ss_pred             cEEEEccCCCEEEEEcC----------CCcEEEEEcCCC-ccCcceeecCCcCeeEEEECCCCCEEEEE--eCCCeEEEE
Q psy15995        525 SSISLDHEHGLVAVGGA----------DSKVHIYELNNK-SLSPKAELDHLGPVTDCSFSPSNEYLVAS--DAHRKVVLY  591 (683)
Q Consensus       525 ~~~~~~~~~~~l~~~~~----------dg~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~d~~i~i~  591 (683)
                      ..+.|+++|.+|++-..          -+...+|.++.. .......+...++|.+++|+|+|+.+|+.  ..++.+.+|
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly   88 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY   88 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence            45788899988776544          133556666332 23334444566789999999999987654  456799999


Q ss_pred             ECCCCccccccceeeecccEEEEEecCCCCeEEEeecC---CcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCCeEE
Q psy15995        592 RVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLD---TTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLV  667 (683)
Q Consensus       592 ~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d---~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~  667 (683)
                      |++ ++.+.  .+  +...++.+.|||+|++|++++.+   |.|.+||+++.+.+....   | ..++.++|+ ++++|+
T Consensus        89 d~~-~~~i~--~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~---~-~~~t~~~WsPdGr~~~  159 (194)
T PF08662_consen   89 DVK-GKKIF--SF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE---H-SDATDVEWSPDGRYLA  159 (194)
T ss_pred             cCc-ccEeE--ee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc---c-CcEEEEEEcCCCCEEE
Confidence            997 33332  22  45778999999999999998754   569999999777665553   2 457999999 788888


Q ss_pred             EeeC------CCcEEEEeec
Q psy15995        668 SVGQ------DCNTKIWEIA  681 (683)
Q Consensus       668 s~~~------d~~v~vw~~~  681 (683)
                      ++..      |+.++||++.
T Consensus       160 ta~t~~r~~~dng~~Iw~~~  179 (194)
T PF08662_consen  160 TATTSPRLRVDNGFKIWSFQ  179 (194)
T ss_pred             EEEeccceeccccEEEEEec
Confidence            8764      7889999875

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.55  E-value=2.2e-12  Score=126.83  Aligned_cols=236  Identities=13%  Similarity=0.139  Sum_probs=149.1

Q ss_pred             eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecC-CC--CEEEEeCCCcccccccccccCCCCcccceeeeeec
Q psy15995         66 SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDI-SG--KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLT  142 (683)
Q Consensus        66 ~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (683)
                      .+.++|.+.... +.+..+...+.+..|||||++|+..+. ++  .|.+||+.+++........               .
T Consensus       199 ~l~i~d~dG~~~-~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~---------------g  262 (448)
T PRK04792        199 QLMIADYDGYNE-QMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFP---------------G  262 (448)
T ss_pred             EEEEEeCCCCCc-eEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCC---------------C
Confidence            678888766554 345667889999999999999987653 33  5899999877532211111               1


Q ss_pred             ceeeeEeeccceEEEe-ecCCcc--EEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCC-ceEEEEEEccC
Q psy15995        143 SIRNILVLSIGFYIAS-GDISGK--VRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR-ERFGHVFMSET  218 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~~-~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~-~~~~~~~~~~~  218 (683)
                      .....+|+|||+.|+. .+.++.  |.++|+.+++...   +..+.......+|+|||+.++..+... ...+++++.++
T Consensus       263 ~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~---lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~  339 (448)
T PRK04792        263 INGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTR---ITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLAS  339 (448)
T ss_pred             CcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEE---CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCC
Confidence            2335789999998875 455564  7778888775322   222334567789999999998876532 23344445555


Q ss_pred             CCceeeeecCCcCeEEEEeecCCCeEEEEeeCCC--eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC-CC-
Q psy15995        219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDN--TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF-DG-  294 (683)
Q Consensus       219 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg-  294 (683)
                      ++. ..+..........+|+|++++++++...++  .|.++|+.+++... +... .......|+|+|+.|+..+. ++ 
T Consensus       340 g~~-~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~-lt~~-~~d~~ps~spdG~~I~~~~~~~g~  416 (448)
T PRK04792        340 GKV-SRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQV-LTST-RLDESPSVAPNGTMVIYSTTYQGK  416 (448)
T ss_pred             CCE-EEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEE-ccCC-CCCCCceECCCCCEEEEEEecCCc
Confidence            543 333323333445789999997555555455  45556777766433 2222 12234589999998776554 33 


Q ss_pred             -cEEEEeCCCCeeEEeccCCccccCeEEEEEcc
Q psy15995        295 -KVFLYDGASADLVSELGNPAHKGGVYAVAWKP  326 (683)
Q Consensus       295 -~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~  326 (683)
                       .+++++. ++.....+..  +.+.+...+|+|
T Consensus       417 ~~l~~~~~-~G~~~~~l~~--~~g~~~~p~Wsp  446 (448)
T PRK04792        417 QVLAAVSI-DGRFKARLPA--GQGEVKSPAWSP  446 (448)
T ss_pred             eEEEEEEC-CCCceEECcC--CCCCcCCCccCC
Confidence             3777786 5555555543  455667777876

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.54  E-value=3.4e-12  Score=126.59  Aligned_cols=236  Identities=11%  Similarity=0.091  Sum_probs=150.2

Q ss_pred             eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCC---CCEEEEeCCCcccccccccccCCCCcccceeeeeec
Q psy15995         66 SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDIS---GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLT  142 (683)
Q Consensus        66 ~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (683)
                      .|.++|.+.+.. +.+..+...+...+|||||++||..+.+   ..|.+||+.+++........               .
T Consensus       180 ~l~~~d~~g~~~-~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~---------------g  243 (430)
T PRK00178        180 TLQRSDYDGARA-VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFE---------------G  243 (430)
T ss_pred             EEEEECCCCCCc-eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCC---------------C
Confidence            588889886654 4455678889999999999999876533   35999999887543211111               2


Q ss_pred             ceeeeEeeccceEEEe-ecCCc--cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCC-ceEEEEEEccC
Q psy15995        143 SIRNILVLSIGFYIAS-GDISG--KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR-ERFGHVFMSET  218 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~~-~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~-~~~~~~~~~~~  218 (683)
                      ......|+|||+.|+. ...+|  .|.+||+.+++...   +..+........|+|||+.++..+... ...+++++..+
T Consensus       244 ~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~---lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~  320 (430)
T PRK00178        244 LNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSR---VTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNG  320 (430)
T ss_pred             CcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEE---cccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCC
Confidence            2345789999998874 44444  58888998876432   222334566789999999988876532 23344555555


Q ss_pred             CCceeeeecCCcCeEEEEeecCCCeEEEEeeCCC--eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCC---
Q psy15995        219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDN--TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD---  293 (683)
Q Consensus       219 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---  293 (683)
                      ++. ..+...........|+|+++.++++...++  .|.++|+.+++.......  .......|+|||+.++..+.+   
T Consensus       321 g~~-~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~lt~~--~~~~~p~~spdg~~i~~~~~~~g~  397 (430)
T PRK00178        321 GRA-ERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRILTDT--SLDESPSVAPNGTMLIYATRQQGR  397 (430)
T ss_pred             CCE-EEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEccCC--CCCCCceECCCCCEEEEEEecCCc
Confidence            553 233222233446789999997444444444  578889887765332222  222356899999988766543   


Q ss_pred             CcEEEEeCCCCeeEEeccCCccccCeEEEEEcc
Q psy15995        294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKP  326 (683)
Q Consensus       294 g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~  326 (683)
                      ..+.+++... .....+..  +.+.+...+|+|
T Consensus       398 ~~l~~~~~~g-~~~~~l~~--~~g~~~~p~ws~  427 (430)
T PRK00178        398 GVLMLVSING-RVRLPLPT--AQGEVREPSWSP  427 (430)
T ss_pred             eEEEEEECCC-CceEECcC--CCCCcCCCccCC
Confidence            3477777643 33344432  445666777776

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.53  E-value=5e-10  Score=101.39  Aligned_cols=388  Identities=11%  Similarity=0.121  Sum_probs=223.2

Q ss_pred             CCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEE-------cCCCcEEEEeCCCCeeEEeccCC
Q psy15995        241 RPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASA-------GFDGKVFLYDGASADLVSELGNP  313 (683)
Q Consensus       241 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-------~~dg~i~iw~~~~~~~~~~~~~~  313 (683)
                      |...+++++.|  +..+++.+++..+ +..|-+-|+...|+|+|+.+|..       ...+.+.+.+.++|+..+..-. 
T Consensus        50 GD~IiFt~~Dd--lWe~slk~g~~~r-itS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~Ge~kRiTyf-  125 (668)
T COG4946          50 GDRIIFTCCDD--LWEYSLKDGKPLR-ITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDGEAKRITYF-  125 (668)
T ss_pred             CcEEEEEechH--HHHhhhccCCeeE-EecccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCCcEEEEEEe-
Confidence            33345666554  3334566665443 44567778899999999988762       2245688888888887655432 


Q ss_pred             ccccCeEE-EEEccCCCEEEEEECCCcE----EEEECCCCce-eeEEEecCcceeceEEEEecCCEEEEEecCCc-----
Q psy15995        314 AHKGGVYA-VAWKPDGTQLLTASGDKTC----KLWDIETKSV-VSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGF-----  382 (683)
Q Consensus       314 ~~~~~i~~-~~~~~~~~~l~~~~~dg~i----~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~-----  382 (683)
                        ....+. .-|.|||+.+++...-.-.    .+|.+..... ...+..+     ........+..++.|-..-.     
T Consensus       126 --Gr~fT~VaG~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~~e~LnlG-----pathiv~~dg~ivigRntydLP~WK  198 (668)
T COG4946         126 --GRRFTRVAGWIPDGEIIVSTDFHTPFSQWTELYKVNVDGIKTEPLNLG-----PATHIVIKDGIIVIGRNTYDLPHWK  198 (668)
T ss_pred             --ccccceeeccCCCCCEEEEeccCCCcccceeeeEEccCCceeeeccCC-----ceeeEEEeCCEEEEccCcccCcccc
Confidence              223333 4589999988776442222    2222222111 1111111     01111112223444322211     


Q ss_pred             -------EEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCc--EEEEcCCCCCcceeccCCCCcceeEEEE
Q psy15995        383 -------ISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGF--ITRWNAKTGENDRVQGAGHGNQINGMKA  453 (683)
Q Consensus       383 -------i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--i~~w~~~~~~~~~~~~~~~~~~v~~~~~  453 (683)
                             =.+|--..+.+....+-.-.+.|++-.+-.+ +..+....+|.  +.--|+......+.. .-+..-...+..
T Consensus       199 ~YkGGtrGklWis~d~g~tFeK~vdl~~~vS~PmIV~~-RvYFlsD~eG~GnlYSvdldGkDlrrHT-nFtdYY~R~~ns  276 (668)
T COG4946         199 GYKGGTRGKLWISSDGGKTFEKFVDLDGNVSSPMIVGE-RVYFLSDHEGVGNLYSVDLDGKDLRRHT-NFTDYYPRNANS  276 (668)
T ss_pred             cccCCccceEEEEecCCcceeeeeecCCCcCCceEEcc-eEEEEecccCccceEEeccCCchhhhcC-CchhccccccCC
Confidence                   1233333223222222222233333222222 23333445554  444444433322221 222223333333


Q ss_pred             eCCeEEEEEcCCeEEEEeCCCCcccCCceecCCC-----Cce---------ee-ecCCeEEEEEeceEEEEe-CCceeee
Q psy15995        454 TGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQ-----PRG---------LD-IDENTLVTVTVKQISIVE-NGAKVSS  517 (683)
Q Consensus       454 ~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~-----~~~---------~~-~~~~~~~~~~~~~~~~~~-~~~~~~~  517 (683)
                      +|..++ -+..|.|.++|..+.......+.++..     +..         .+ .+++..+.....+.-+.. .......
T Consensus       277 DGkrIv-Fq~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSRGkaFi~~~~~~~~iq  355 (668)
T COG4946         277 DGKRIV-FQNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSRGKAFIMRPWDGYSIQ  355 (668)
T ss_pred             CCcEEE-EecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEecCcEEEECCCCCeeEE
Confidence            344443 346788999998888776555442221     100         11 122334444444433332 3344555


Q ss_pred             ecCCCCCcEEEEccCCCEEEEEcCCC-cEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCC
Q psy15995        518 LPIDYEPSSISLDHEHGLVAVGGADS-KVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDF  596 (683)
Q Consensus       518 ~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~  596 (683)
                      ++....+.-..+..+++-++.|..|| .+-+||..+++..  ...+.-+.|.++..+|||++++++.....+.+.|+.++
T Consensus       356 v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~k--r~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididng  433 (668)
T COG4946         356 VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVK--RIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNG  433 (668)
T ss_pred             cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEE--EeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCC
Confidence            66677788788888888899999999 8999999998754  22346688999999999999999999999999999999


Q ss_pred             ccccccceeeecccEEEEEecCCCCeEEEeecCC----cEEEEeCCCCceeeEe
Q psy15995        597 ELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDT----TIIIWSLASPAKHIII  646 (683)
Q Consensus       597 ~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~----~v~iw~~~~~~~~~~~  646 (683)
                      ........  ..+-|+.+.|+|+++++|-+--+|    .|+++|+..++.....
T Consensus       434 nv~~idkS--~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vT  485 (668)
T COG4946         434 NVRLIDKS--EYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVT  485 (668)
T ss_pred             CeeEeccc--ccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEec
Confidence            87643332  567899999999999999988776    6999999987765444

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.51  E-value=6e-12  Score=125.05  Aligned_cols=222  Identities=14%  Similarity=0.134  Sum_probs=145.1

Q ss_pred             eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCC---CCEEEEeCCCcccccccccccCCCCcccceeeeeec
Q psy15995         66 SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDIS---GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLT  142 (683)
Q Consensus        66 ~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (683)
                      .|.++|...... +.+..+...+...+|||||++||.+..+   ..|.+||+.+++........               .
T Consensus       171 ~l~~~d~~g~~~-~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~---------------~  234 (417)
T TIGR02800       171 ELQVADYDGANP-QTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFP---------------G  234 (417)
T ss_pred             eEEEEcCCCCCC-EEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCC---------------C
Confidence            688999865544 4456677789999999999999876543   47999999887543221111               2


Q ss_pred             ceeeeEeeccceEEEe-ecCCc--cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCC-ceEEEEEEccC
Q psy15995        143 SIRNILVLSIGFYIAS-GDISG--KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR-ERFGHVFMSET  218 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~~-~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~-~~~~~~~~~~~  218 (683)
                      ....++|+|||+.|+. .+.++  .|.+||+.+++...   +..+........|+|||+.++..+... ...+++++.+.
T Consensus       235 ~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~---l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~  311 (417)
T TIGR02800       235 MNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTR---LTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADG  311 (417)
T ss_pred             CccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEE---CCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCC
Confidence            3456789999987764 44444  58889988765322   222334455789999999998876533 22345555554


Q ss_pred             CCceeeeecCCcCeEEEEeecCCCeEEEEeeCCC---eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCC-
Q psy15995        219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDN---TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDG-  294 (683)
Q Consensus       219 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-  294 (683)
                      ++ ...+..+........|+|++++ ++..+.++   .|.+||+.++.... +... .......|+|+++.|+..+.++ 
T Consensus       312 ~~-~~~l~~~~~~~~~~~~spdg~~-i~~~~~~~~~~~i~~~d~~~~~~~~-l~~~-~~~~~p~~spdg~~l~~~~~~~~  387 (417)
T TIGR02800       312 GE-VRRLTFRGGYNASPSWSPDGDL-IAFVHREGGGFNIAVMDLDGGGERV-LTDT-GLDESPSFAPNGRMILYATTRGG  387 (417)
T ss_pred             CC-EEEeecCCCCccCeEECCCCCE-EEEEEccCCceEEEEEeCCCCCeEE-ccCC-CCCCCceECCCCCEEEEEEeCCC
Confidence            44 3445556667788899999996 55555554   78888987755433 2222 2345568999999888776654 


Q ss_pred             --cEEEEeCCCCeeEEecc
Q psy15995        295 --KVFLYDGASADLVSELG  311 (683)
Q Consensus       295 --~i~iw~~~~~~~~~~~~  311 (683)
                        .+++.+. ++.....+.
T Consensus       388 ~~~l~~~~~-~g~~~~~~~  405 (417)
T TIGR02800       388 RGVLGLVST-DGRFRARLP  405 (417)
T ss_pred             cEEEEEEEC-CCceeeECC
Confidence              3555553 344444443

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.47  E-value=1.3e-10  Score=113.34  Aligned_cols=301  Identities=14%  Similarity=0.122  Sum_probs=189.1

Q ss_pred             CCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccce
Q psy15995         96 SGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEH  175 (683)
Q Consensus        96 d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~  175 (683)
                      .+.++++++.+|.|.-+|..+|+.+.+......   +           ....  ..++..++.++.++.+..+|..+|+.
T Consensus        64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~---~-----------~~~p--~v~~~~v~v~~~~g~l~ald~~tG~~  127 (377)
T TIGR03300        64 AGGKVYAADADGTVVALDAETGKRLWRVDLDER---L-----------SGGV--GADGGLVFVGTEKGEVIALDAEDGKE  127 (377)
T ss_pred             ECCEEEEECCCCeEEEEEccCCcEeeeecCCCC---c-----------ccce--EEcCCEEEEEcCCCEEEEEECCCCcE
Confidence            356788888899999999999988876655431   0           0111  12456777888899999999999987


Q ss_pred             eeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEE
Q psy15995        176 ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIA  255 (683)
Q Consensus       176 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~  255 (683)
                      +.+....   +.+.   -+|                                        ..  .+. .++.++.++.+.
T Consensus       128 ~W~~~~~---~~~~---~~p----------------------------------------~v--~~~-~v~v~~~~g~l~  158 (377)
T TIGR03300       128 LWRAKLS---SEVL---SPP----------------------------------------LV--ANG-LVVVRTNDGRLT  158 (377)
T ss_pred             eeeeccC---ceee---cCC----------------------------------------EE--ECC-EEEEECCCCeEE
Confidence            7654432   1110   000                                        00  011 255666778888


Q ss_pred             EEcCCCCceeeeccccccCe-----EEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccc--cC---eEEEEEc
Q psy15995        256 VFEGPPFKFKMTKQEHSRFV-----QAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHK--GG---VYAVAWK  325 (683)
Q Consensus       256 iw~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~--~~---i~~~~~~  325 (683)
                      .||.++++.+..........     .+...  .+..++.+..+|.+..+|.++|+.+.........  ..   ...+.-+
T Consensus       159 a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~  236 (377)
T TIGR03300       159 ALDAATGERLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGD  236 (377)
T ss_pred             EEEcCCCceeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCc
Confidence            88888887766554322211     11111  1246778888899999999999876654321000  00   0001111


Q ss_pred             c--CCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccc
Q psy15995        326 P--DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNK  403 (683)
Q Consensus       326 ~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~  403 (683)
                      |  .+..+++++.+|.+..+|..+++.+.......     ...+...++.+++++.+|.+..+|..++...-..-.....
T Consensus       237 p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~-----~~~p~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~  311 (377)
T TIGR03300       237 PVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDASS-----YQGPAVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYR  311 (377)
T ss_pred             cEEECCEEEEEEcCCEEEEEECCCCcEEEeeccCC-----ccCceEeCCEEEEECCCCeEEEEECCCCcEEEccccccCC
Confidence            1  35578888889999999999998776554211     1122346788899999999999999875433221111111


Q ss_pred             cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEE
Q psy15995        404 PITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQV  470 (683)
Q Consensus       404 ~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~  470 (683)
                      .......  .+..+++++.+|.|.++|..+++..............+....++.|+.++.||.|..+
T Consensus       312 ~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~~l~v~~~dG~l~~~  376 (377)
T TIGR03300       312 QLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVVGDGLLVQTRDGDLYAF  376 (377)
T ss_pred             ccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEECCEEEEEeCCceEEEe
Confidence            1222222  4578899999999999999999887766433322233344557889999999998765

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.47  E-value=9.6e-12  Score=122.39  Aligned_cols=216  Identities=15%  Similarity=0.135  Sum_probs=136.6

Q ss_pred             CCeEEEeeCCCCCeEEEec--C--CeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEE-ecCCCC--EEEEeCCCc
Q psy15995         45 GQPIVLGGDPKGKNFLYTN--G--NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIAS-GDISGK--VRIWDTVNK  117 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~--~--~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las-~~~dg~--i~iwd~~~~  117 (683)
                      ..+....|||||+.|++..  +  ..|++||+.+++... +....+.....+|||||+.|+. .+.+|.  |.+||+.++
T Consensus       218 ~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg  296 (448)
T PRK04792        218 EPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATK  296 (448)
T ss_pred             CcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCC
Confidence            3556778999999999873  2  369999998876532 2222333457899999998875 455664  888888776


Q ss_pred             ccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC-Cc--cEEEEeccccceeeeccccccCCCeeEEEEc
Q psy15995        118 EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI-SG--KVRIWDTVNKEHILKNEFHPIGGPIKDIAWS  194 (683)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s  194 (683)
                      +.. .+..+.              .......|+|||++|+..+. ++  .|.++|+.+++... .....  ......+|+
T Consensus       297 ~~~-~lt~~~--------------~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~g--~~~~~~~~S  358 (448)
T PRK04792        297 ALT-RITRHR--------------AIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFEG--EQNLGGSIT  358 (448)
T ss_pred             CeE-ECccCC--------------CCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecCC--CCCcCeeEC
Confidence            432 222111              23456789999998876553 33  46667777765322 22221  233457999


Q ss_pred             CCCCeEEEEecCCce-EEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCe--EEEEcCCCCceeeecccc
Q psy15995        195 PDNQRMVVVGEGRER-FGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNT--IAVFEGPPFKFKMTKQEH  271 (683)
Q Consensus       195 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--i~iw~~~~~~~~~~~~~~  271 (683)
                      |||++++........ .+.+++.++++. ..+... .......|+|+++.++++...++.  +.+++. +++....+..+
T Consensus       359 pDG~~l~~~~~~~g~~~I~~~dl~~g~~-~~lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~  435 (448)
T PRK04792        359 PDGRSMIMVNRTNGKFNIARQDLETGAM-QVLTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAG  435 (448)
T ss_pred             CCCCEEEEEEecCCceEEEEEECCCCCe-EEccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCC
Confidence            999999887754332 234445555543 223322 122345899999976666655554  566675 55566666666


Q ss_pred             ccCeEEEEECC
Q psy15995        272 SRFVQAVRYSP  282 (683)
Q Consensus       272 ~~~v~~~~~~~  282 (683)
                      .+.+...+|+|
T Consensus       436 ~g~~~~p~Wsp  446 (448)
T PRK04792        436 QGEVKSPAWSP  446 (448)
T ss_pred             CCCcCCCccCC
Confidence            66677788887

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.46  E-value=1.6e-10  Score=112.65  Aligned_cols=296  Identities=14%  Similarity=0.093  Sum_probs=185.4

Q ss_pred             CCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceec
Q psy15995        284 GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQ  363 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  363 (683)
                      +..+++++.+|.+..+|..+|+.+.......  .......  .++..++.++.++.+..+|..+++.+.+..........
T Consensus        65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~--~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~  140 (377)
T TIGR03300        65 GGKVYAADADGTVVALDAETGKRLWRVDLDE--RLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSP  140 (377)
T ss_pred             CCEEEEECCCCeEEEEEccCCcEeeeecCCC--CcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecC
Confidence            5578888889999999999999887765422  1111222  24677888889999999999999988766543321111


Q ss_pred             eEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccE-----EEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcce
Q psy15995        364 QVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPI-----TALALSPDRGTVFTGSHDGFITRWNAKTGENDR  438 (683)
Q Consensus       364 ~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~  438 (683)
                         ....++.++++..+|.+..+|..++...-+ ........     .+.... + ..++.+..++.+..+|..+++...
T Consensus       141 ---p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~-~~~~~~~~~~~~~~sp~~~-~-~~v~~~~~~g~v~ald~~tG~~~W  214 (377)
T TIGR03300       141 ---PLVANGLVVVRTNDGRLTALDAATGERLWT-YSRVTPALTLRGSASPVIA-D-GGVLVGFAGGKLVALDLQTGQPLW  214 (377)
T ss_pred             ---CEEECCEEEEECCCCeEEEEEcCCCceeeE-EccCCCceeecCCCCCEEE-C-CEEEEECCCCEEEEEEccCCCEee
Confidence               112466788888999999999987544222 11111110     111121 2 467788888999999999887654


Q ss_pred             eccCCCCc----------ceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEE
Q psy15995        439 VQGAGHGN----------QINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISI  508 (683)
Q Consensus       439 ~~~~~~~~----------~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (683)
                      ........          ........++.++.++.++.+..+|..+++....                            
T Consensus       215 ~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~----------------------------  266 (377)
T TIGR03300       215 EQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWK----------------------------  266 (377)
T ss_pred             eeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEe----------------------------
Confidence            32211100          0112223478899999999999999876542110                            


Q ss_pred             EeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeE
Q psy15995        509 VENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKV  588 (683)
Q Consensus       509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i  588 (683)
                               .+.. .....  ...+..+++++.+|.+..+|..+++.......-..........  .+..|++++.+|.+
T Consensus       267 ---------~~~~-~~~~p--~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l  332 (377)
T TIGR03300       267 ---------RDAS-SYQGP--AVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYL  332 (377)
T ss_pred             ---------eccC-CccCc--eEeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEE
Confidence                     0000 01111  1245678888899999999999887654331111111222222  46788999999999


Q ss_pred             EEEECCCCccccccceeeecccEE-EEEecCCCCeEEEeecCCcEEEE
Q psy15995        589 VLYRVPDFELAHNKEWGFHSAKVN-CVAWSPDSALVASGSLDTTIIIW  635 (683)
Q Consensus       589 ~i~~~~~~~~~~~~~~~~h~~~v~-~~~~s~d~~~l~~~~~d~~v~iw  635 (683)
                      +++|..+++.+.....  +...+. +.++. + +.|+.++.||.|+.+
T Consensus       333 ~~~d~~tG~~~~~~~~--~~~~~~~sp~~~-~-~~l~v~~~dG~l~~~  376 (377)
T TIGR03300       333 HWLSREDGSFVARLKT--DGSGIASPPVVV-G-DGLLVQTRDGDLYAF  376 (377)
T ss_pred             EEEECCCCCEEEEEEc--CCCccccCCEEE-C-CEEEEEeCCceEEEe
Confidence            9999999998765443  332222 22222 3 358888899988765

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG1354|consensus

Probab=99.45  E-value=1.4e-11  Score=106.32  Aligned_cols=278  Identities=15%  Similarity=0.182  Sum_probs=176.0

Q ss_pred             cccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCc----ceeccCCC------------CcceeEEEEe----CCeEEEE
Q psy15995        402 NKPITALALSPDRGTVFTGSHDGFITRWNAKTGEN----DRVQGAGH------------GNQINGMKAT----GELLYTC  461 (683)
Q Consensus       402 ~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~----~~~~~~~~------------~~~v~~~~~~----~~~l~~~  461 (683)
                      ..-|.++.|...|.+|++|..+|.|.++.-.....    .....+.|            ...|..+.|.    ...++..
T Consensus        25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls  104 (433)
T KOG1354|consen   25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS  104 (433)
T ss_pred             hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence            45688999999999999999999999996543332    11111222            2456677776    5578888


Q ss_pred             EcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcC
Q psy15995        462 GIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGA  541 (683)
Q Consensus       462 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  541 (683)
                      +.|.+|++|.+..............+.....+..-.+.........+.....++....+...+.+++++.|+..++++ +
T Consensus       105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-D  183 (433)
T KOG1354|consen  105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-D  183 (433)
T ss_pred             cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-c
Confidence            899999999998765544222222111110111111112222222222334455555688889999999999998876 4


Q ss_pred             CCcEEEEEcCCCccCcce-ee------cCCcCeeEEEECC-CCCEEEEEeCCCeEEEEECCCCccccc-------cc---
Q psy15995        542 DSKVHIYELNNKSLSPKA-EL------DHLGPVTDCSFSP-SNEYLVASDAHRKVVLYRVPDFELAHN-------KE---  603 (683)
Q Consensus       542 dg~i~i~d~~~~~~~~~~-~~------~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~-------~~---  603 (683)
                      |=.|.+|+++-....... .+      .-..-|++..|+| ....++-.+..|+|++-|+....+...       .+   
T Consensus       184 dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~  263 (433)
T KOG1354|consen  184 DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPS  263 (433)
T ss_pred             ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCc
Confidence            567889988643221111 11      1234588999999 466778888999999999984332111       00   


Q ss_pred             ----eeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCce-eeEeec----------CCCCCCe---eEEEEc-cCC
Q psy15995        604 ----WGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAK-HIIIKN----------AHPQSQI---TRLQWL-DND  664 (683)
Q Consensus       604 ----~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~-~~~~~~----------~~~~~~v---~~l~~~-~~~  664 (683)
                          +..--..|..+.||++|+++++-+. -+|++||+..... +.....          .-.++.|   ..++|+ ++.
T Consensus       264 ~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~  342 (433)
T KOG1354|consen  264 SRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDS  342 (433)
T ss_pred             chhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcc
Confidence                0001245889999999999997543 4799999954433 333221          0012333   467888 778


Q ss_pred             eEEEeeCCCcEEEEeec
Q psy15995        665 LLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       665 ~l~s~~~d~~v~vw~~~  681 (683)
                      .++||+.....++++++
T Consensus       343 ~v~TGsy~n~frvf~~~  359 (433)
T KOG1354|consen  343 YVMTGSYNNVFRVFNLA  359 (433)
T ss_pred             eEecccccceEEEecCC
Confidence            99999999999999854

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.44  E-value=7.7e-11  Score=114.99  Aligned_cols=203  Identities=15%  Similarity=0.122  Sum_probs=129.5

Q ss_pred             ceeeeEeeccceEEE---eecCC--ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecC---CceEEEEE
Q psy15995        143 SIRNILVLSIGFYIA---SGDIS--GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEG---RERFGHVF  214 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~---~~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~---~~~~~~~~  214 (683)
                      ......|+|||+.++   +...+  ..|.+.++.+++......+   .+.....+|+|||+.|+.....   .+.....+
T Consensus       186 ~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~---~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~  262 (428)
T PRK01029        186 LSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILAL---QGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSF  262 (428)
T ss_pred             CcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecC---CCCccceEECCCCCEEEEEECCCCCcceeEEEe
Confidence            345668999997522   34333  4588888888764433333   3555678999999999987742   12222334


Q ss_pred             EccCC---CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEc--CCC-CceeeeccccccCeEEEEECCCCCEEE
Q psy15995        215 MSETG---TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFE--GPP-FKFKMTKQEHSRFVQAVRYSPSGSHFA  288 (683)
Q Consensus       215 ~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~--~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~  288 (683)
                      +...+   ........+.......+|+|+|+.++++...+|...+|.  +.. +.....+..+...+....|+|||+.|+
T Consensus       263 ~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~La  342 (428)
T PRK01029        263 SLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIA  342 (428)
T ss_pred             ecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEE
Confidence            44432   222223233344567899999997455555567655554  332 223344444555678899999999888


Q ss_pred             EEcCC---CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC---CCcEEEEECCCCcee
Q psy15995        289 SAGFD---GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG---DKTCKLWDIETKSVV  351 (683)
Q Consensus       289 ~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~  351 (683)
                      ..+.+   ..|.+||+.+++......   ....+....|+|||+.|+....   ...|.++|+..++..
T Consensus       343 f~~~~~g~~~I~v~dl~~g~~~~Lt~---~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~  408 (428)
T PRK01029        343 FCSVIKGVRQICVYDLATGRDYQLTT---SPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTR  408 (428)
T ss_pred             EEEcCCCCcEEEEEECCCCCeEEccC---CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence            76543   369999998887654432   2345677899999998876543   346888898877653

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.39  E-value=1.2e-10  Score=115.81  Aligned_cols=195  Identities=14%  Similarity=0.104  Sum_probs=130.8

Q ss_pred             cceeeeEeeccceEEEeecCC---ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEec-CCceEEEEEEcc
Q psy15995        142 TSIRNILVLSIGFYIASGDIS---GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE-GRERFGHVFMSE  217 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-~~~~~~~~~~~~  217 (683)
                      ..+....|+|||++|+....+   ..|.+||+.+++.....   .+.+.+.+++|+|||+.+++... +....+++++.+
T Consensus       190 ~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~---~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~  266 (417)
T TIGR02800       190 EPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVA---SFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLD  266 (417)
T ss_pred             CceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEee---cCCCCccceEECCCCCEEEEEECCCCCccEEEEECC
Confidence            346677899999999887543   47999999987543322   23456678999999998876543 333335566665


Q ss_pred             CCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCC--eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCC-
Q psy15995        218 TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDN--TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDG-  294 (683)
Q Consensus       218 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-  294 (683)
                      ++. ...+..+........|+|+++.++++...++  .|.+++..+++.. .+..+...+....|+|+|++++.++.++ 
T Consensus       267 ~~~-~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spdg~~i~~~~~~~~  344 (417)
T TIGR02800       267 GKQ-LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPDGDLIAFVHREGG  344 (417)
T ss_pred             CCC-EEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeEECCCCCEEEEEEccCC
Confidence            554 3344455555667899999986444444444  5777787766543 3444556677889999999998887765 


Q ss_pred             --cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC---cEEEEEC
Q psy15995        295 --KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK---TCKLWDI  345 (683)
Q Consensus       295 --~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~iwd~  345 (683)
                        .|.+||+.++.... +..   ........|+|+++.|+..+.++   .+.+.+.
T Consensus       345 ~~~i~~~d~~~~~~~~-l~~---~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~  396 (417)
T TIGR02800       345 GFNIAVMDLDGGGERV-LTD---TGLDESPSFAPNGRMILYATTRGGRGVLGLVST  396 (417)
T ss_pred             ceEEEEEeCCCCCeEE-ccC---CCCCCCceECCCCCEEEEEEeCCCcEEEEEEEC
Confidence              78999988765433 221   12234568999999888877654   3444443

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG4547|consensus

Probab=99.39  E-value=1.2e-10  Score=108.65  Aligned_cols=116  Identities=15%  Similarity=0.190  Sum_probs=97.6

Q ss_pred             cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee
Q psy15995        227 GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL  306 (683)
Q Consensus       227 ~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~  306 (683)
                      .|.+.|+++.++.+-. +|.+++.|+.+..|+....+...........+.+++++|||..+++++  +.|++||+++++.
T Consensus       100 ~h~~~v~~~~~~~~~~-ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kev  176 (541)
T KOG4547|consen  100 KHYGNVNEILDAQRLG-CIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEV  176 (541)
T ss_pred             CCCCcceeeecccccC-ceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccCceE
Confidence            4666777777666665 599999999999999999999999998899999999999999999988  7899999999999


Q ss_pred             EEeccCCccccCeEEEEEccC-----CCEEEEE-ECCCcEEEEECCC
Q psy15995        307 VSELGNPAHKGGVYAVAWKPD-----GTQLLTA-SGDKTCKLWDIET  347 (683)
Q Consensus       307 ~~~~~~~~~~~~i~~~~~~~~-----~~~l~~~-~~dg~i~iwd~~~  347 (683)
                      +..+.+  |.++|.+++|..+     |.++++. ..+..+.+|-.+.
T Consensus       177 v~~ftg--h~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~  221 (541)
T KOG4547|consen  177 VITFTG--HGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK  221 (541)
T ss_pred             EEEecC--CCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence            999976  9999999999876     6666654 3455577776654

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.38  E-value=8.2e-10  Score=94.05  Aligned_cols=243  Identities=17%  Similarity=0.220  Sum_probs=151.4

Q ss_pred             EeeCCCCCeEEEecCCeEEEEeCCCC--cccc---cccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccc
Q psy15995         50 LGGDPKGKNFLYTNGNSVIIRNIENP--AISD---IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNE  124 (683)
Q Consensus        50 ~~~s~~~~~l~~~~~~~i~v~~~~~~--~~~~---~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~  124 (683)
                      ++.++||+.||...+..|.|-..++.  ..+.   .-+...-.=+.++||||+.+||.+...|+|+++|+... .+..+.
T Consensus         3 ~~~~~~Gk~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~-~lf~I~   81 (282)
T PF15492_consen    3 LALSSDGKLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGS-ELFVIP   81 (282)
T ss_pred             eeecCCCcEEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccc-eeEEcC
Confidence            56799999999999999999877653  1212   22333445678999999999999999999999998764 333433


Q ss_pred             cccCCCCcccceeeeeecceeeeEeeccc------eEEEeecCCccEEEEecccc-----ceeeeccccc-cCCCeeEEE
Q psy15995        125 FHPIGGPIKDIGTLLSLTSIRNILVLSIG------FYIASGDISGKVRIWDTVNK-----EHILKNEFHP-IGGPIKDIA  192 (683)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~------~~l~~~~~d~~i~iwd~~~~-----~~~~~~~~~~-~~~~i~~~~  192 (683)
                      .....  ..     .....|..+.|.+.-      .-|++-..+|.++=|-+..+     +....+.+.. ....|.++.
T Consensus        82 p~~~~--~~-----d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~v  154 (282)
T PF15492_consen   82 PAMSF--PG-----DLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAV  154 (282)
T ss_pred             ccccc--CC-----ccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEE
Confidence            32110  00     112455566565432      24555666777776665322     1222233332 357899999


Q ss_pred             EcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEE-eeCCCe------EEEEcCCCCcee
Q psy15995        193 WSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIIT-GSEDNT------IAVFEGPPFKFK  265 (683)
Q Consensus       193 ~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~d~~------i~iw~~~~~~~~  265 (683)
                      +.|..+.|++++......            ..-+.....+++-....+.++...+ ..+|+.      -.+|.+.+.+..
T Consensus       155 y~p~h~LLlVgG~~~~~~------------~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~f  222 (282)
T PF15492_consen  155 YHPKHRLLLVGGCEQNQD------------GMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFF  222 (282)
T ss_pred             EcCCCCEEEEeccCCCCC------------ccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeee
Confidence            999999988887654210            0011222334444444444443322 222222      133443333333


Q ss_pred             eeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccC
Q psy15995        266 MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN  312 (683)
Q Consensus       266 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  312 (683)
                      .........|..|..||||+.||+...+|.|.+|++.+-........
T Consensus       223 s~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~  269 (282)
T PF15492_consen  223 SRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQ  269 (282)
T ss_pred             eccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccch
Confidence            32334567899999999999999999999999999998877766543

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.38  E-value=3.7e-10  Score=112.12  Aligned_cols=236  Identities=15%  Similarity=0.118  Sum_probs=149.8

Q ss_pred             cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCC-ceEEEEEEccCCCceeeeecCCcCeEEEEeecCCC
Q psy15995        164 KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR-ERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRP  242 (683)
Q Consensus       164 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  242 (683)
                      .|.++|...+...   .+..+...+...+|+|||+.|+..+... ...+.+++.++++... +....+.+....|+|+++
T Consensus       180 ~l~~~d~~g~~~~---~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~  255 (430)
T PRK00178        180 TLQRSDYDGARAV---TLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGS  255 (430)
T ss_pred             EEEEECCCCCCce---EEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCC
Confidence            4777888765422   2223446789999999999998876543 2346666776665432 333344556789999999


Q ss_pred             eEEEEeeCCC--eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC-CC--cEEEEeCCCCeeEEeccCCcccc
Q psy15995        243 FRIITGSEDN--TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF-DG--KVFLYDGASADLVSELGNPAHKG  317 (683)
Q Consensus       243 ~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~iw~~~~~~~~~~~~~~~~~~  317 (683)
                      .++++.+.++  .|.++|+.+++.. .+..+........|+|||+.++..+. +|  .|+++++.+++......   ...
T Consensus       256 ~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~---~~~  331 (430)
T PRK00178        256 KLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTF---VGN  331 (430)
T ss_pred             EEEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec---CCC
Confidence            7555665555  5888898877654 34445556677899999998776553 33  57788887776543321   122


Q ss_pred             CeEEEEEccCCCEEEEEECC-C--cEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecC-C--cEEEEecCCC
Q psy15995        318 GVYAVAWKPDGTQLLTASGD-K--TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS-G--FISYLDVNNP  391 (683)
Q Consensus       318 ~i~~~~~~~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g--~i~~~~~~~~  391 (683)
                      ......|+||++.++....+ +  .|.++|+.+++.. .+...  .......++|+++.++..... +  .+.+++... 
T Consensus       332 ~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~~--~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g-  407 (430)
T PRK00178        332 YNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTDT--SLDESPSVAPNGTMLIYATRQQGRGVLMLVSING-  407 (430)
T ss_pred             CccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE-EccCC--CCCCCceECCCCCEEEEEEecCCceEEEEEECCC-
Confidence            33457899999999887653 2  4788999887643 22221  122345788899988877654 3  355555542 


Q ss_pred             CcceeeeeeccccEEEEEEeC
Q psy15995        392 STPIRVIKGHNKPITALALSP  412 (683)
Q Consensus       392 ~~~~~~~~~~~~~v~~~~~~~  412 (683)
                       .....+..+.+.+...+|+|
T Consensus       408 -~~~~~l~~~~g~~~~p~ws~  427 (430)
T PRK00178        408 -RVRLPLPTAQGEVREPSWSP  427 (430)
T ss_pred             -CceEECcCCCCCcCCCccCC
Confidence             22233434445566666665

>KOG4547|consensus

Probab=99.35  E-value=2.8e-11  Score=112.74  Aligned_cols=147  Identities=15%  Similarity=0.241  Sum_probs=123.2

Q ss_pred             ccCCCEEEEEcCCCcEEEEEcCCCccCcceee-cCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeec
Q psy15995        530 DHEHGLVAVGGADSKVHIYELNNKSLSPKAEL-DHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHS  608 (683)
Q Consensus       530 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~  608 (683)
                      +.+...++.|...|.|.+|+...+++..+... .|.++|.++.++.+-..|.+++.|+.+..|+....+.......  ..
T Consensus        67 s~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~--~~  144 (541)
T KOG4547|consen   67 SLDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKE--QK  144 (541)
T ss_pred             cCCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeecc--CC
Confidence            34556788899999999999999998876663 4999999999999999999999999999999999887754333  56


Q ss_pred             ccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-c-----CCeEE-EeeCCCcEEEEeec
Q psy15995        609 AKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-D-----NDLLV-SVGQDCNTKIWEIA  681 (683)
Q Consensus       609 ~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~-----~~~l~-s~~~d~~v~vw~~~  681 (683)
                      ..+.+++.+|||++|++++  +.|++||+++.+.+..+.+  |.++|..+.|. .     +.+++ +...+.-+.+|-++
T Consensus       145 ~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftg--h~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~  220 (541)
T KOG4547|consen  145 PLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTG--HGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVE  220 (541)
T ss_pred             CccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecC--CCcceEEEEEEEeccccccceeeeccccccceeEEEEE
Confidence            7799999999999999986  6799999999999988866  89999999998 4     34555 45566778888775


Q ss_pred             c
Q psy15995        682 P  682 (683)
Q Consensus       682 ~  682 (683)
                      +
T Consensus       221 ~  221 (541)
T KOG4547|consen  221 K  221 (541)
T ss_pred             c
Confidence            3

>KOG4190|consensus

Probab=99.29  E-value=3.1e-11  Score=111.12  Aligned_cols=283  Identities=14%  Similarity=0.187  Sum_probs=185.6

Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC-------CCceeeeccccccCeEEEEECCCCCEEEEEcCCC
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP-------PFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDG  294 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  294 (683)
                      +..+.+|...|..+.--.+.+. +++++.|.++++|.++       +..+..+++.|..+|.++.|-.+-++++++  ||
T Consensus       728 L~nf~GH~~~iRai~AidNENS-FiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~  804 (1034)
T KOG4190|consen  728 LCNFTGHQEKIRAIAAIDNENS-FISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DG  804 (1034)
T ss_pred             eecccCcHHHhHHHHhcccccc-eeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cC
Confidence            4567899999998877666664 9999999999999864       334677889999999999999998887765  68


Q ss_pred             cEEEEeCCCCeeEEeccCCccccCeEEEEEcc--CCCEEEEE-ECCCcEEEEECCCCceeeEEEecCcceeceEEEEecC
Q psy15995        295 KVFLYDGASADLVSELGNPAHKGGVYAVAWKP--DGTQLLTA-SGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQG  371 (683)
Q Consensus       295 ~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (683)
                      .|.+||.--+..+..+......+.+..+...+  +...++++ +...+++++|.+..+...++....             
T Consensus       805 giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcn-------------  871 (1034)
T KOG4190|consen  805 GIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCN-------------  871 (1034)
T ss_pred             cceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEecc-------------
Confidence            89999988777766443322333333333333  34444444 678899999999887765553211             


Q ss_pred             CEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEE
Q psy15995        372 DYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGM  451 (683)
Q Consensus       372 ~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~  451 (683)
                                                ..+.+..+.+++..|.|++++.+-.+|.|.+.|.++++.+..... .......+
T Consensus       872 --------------------------a~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrp-mecdllql  924 (1034)
T KOG4190|consen  872 --------------------------APGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRP-MECDLLQL  924 (1034)
T ss_pred             --------------------------CCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCc-ccchhhhh
Confidence                                      123456788999999999999999999999999999987766532 22333333


Q ss_pred             EE-eCCeEEEEEcCCeEEE-EeCCCCcccCCceecCCCCcee-eecCCeEEEEEeceEEEEeCC---------ceeeeec
Q psy15995        452 KA-TGELLYTCGIDDTIKQ-VDLSSNAYSGPEVKLGSQPRGL-DIDENTLVTVTVKQISIVENG---------AKVSSLP  519 (683)
Q Consensus       452 ~~-~~~~l~~~~~d~~i~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  519 (683)
                      +. +.+.++....|..+.+ |....+-..-...+.+....-+ ...+..+.....+.+.++.+.         .+++.-.
T Consensus       925 aapsdq~L~~saldHslaVnWhaldgimh~q~kpppepahflqsvgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~ 1004 (1034)
T KOG4190|consen  925 AAPSDQALAQSALDHSLAVNWHALDGIMHLQDKPPPEPAHFLQSVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDE 1004 (1034)
T ss_pred             cCchhHHHHhhcccceeEeeehhcCCeeeeccCCCCcchhhhhccCceeEEeccCcEEEEEecchhhhhhhhhccccccc
Confidence            33 3566666777777777 7644432211111111111111 112223333333344444322         2444445


Q ss_pred             CCCCCcEEEEccCCCEEEEEcCCCcEEE
Q psy15995        520 IDYEPSSISLDHEHGLVAVGGADSKVHI  547 (683)
Q Consensus       520 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i  547 (683)
                      .....++++.-|-..-++.|.+.|.|.+
T Consensus      1005 f~G~lTala~LPLN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen 1005 FPGTLTALAPLPLNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred             cCCccceeeeccccchhhccCCCCceee
Confidence            6677788888888888888888887765

>KOG0280|consensus

Probab=99.27  E-value=1e-09  Score=93.09  Aligned_cols=189  Identities=14%  Similarity=0.204  Sum_probs=131.3

Q ss_pred             EEEeecCCccEEEEeccccceeeecc-cccc--C-CCeeEEEEcCCCCeEEEEecCCceEEEEEEccCC--CceeeeecC
Q psy15995        155 YIASGDISGKVRIWDTVNKEHILKNE-FHPI--G-GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG--TSVGEISGQ  228 (683)
Q Consensus       155 ~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~--~-~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  228 (683)
                      .|+-+..+|.|.++.....+...... +...  . ....++.|++.+..+++.-.....  .+......  +.+...+.|
T Consensus        87 ~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~--~~v~~t~~~le~vq~wk~H  164 (339)
T KOG0280|consen   87 NLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSI--SGVYETEMVLEKVQTWKVH  164 (339)
T ss_pred             eeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcE--EEEecceeeeeeccccccc
Confidence            45666778888888765433211111 1110  1 124577889888887776655442  23333333  334478999


Q ss_pred             CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC-CCceeee-ccccccCeEEEEECCC-CCEEEEEcCCCcEEEEeCCC-C
Q psy15995        229 SKPINSCDFKPSRPFRIITGSEDNTIAVFEGP-PFKFKMT-KQEHSRFVQAVRYSPS-GSHFASAGFDGKVFLYDGAS-A  304 (683)
Q Consensus       229 ~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~-~~~~~~~-~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~-~  304 (683)
                      ....+...|+...+.++.+|+.|+.+..||++ +++.+.. .+.|...|.++.-+|. +.++++|+.|-.|++||.++ +
T Consensus       165 e~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~  244 (339)
T KOG0280|consen  165 EFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMG  244 (339)
T ss_pred             ceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhccc
Confidence            99999999999998889999999999999988 5555554 5678899999988875 56999999999999999884 4


Q ss_pred             eeEEeccCCccccCeEEEEEccCC--CEEEEEECCCcEEEEECCCCc
Q psy15995        305 DLVSELGNPAHKGGVYAVAWKPDG--TQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       305 ~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      +++....   -.+.|..+.++|.-  ..|+++-.+ -.++.+.+.+.
T Consensus       245 kPl~~~~---v~GGVWRi~~~p~~~~~lL~~CMh~-G~ki~~~~~~~  287 (339)
T KOG0280|consen  245 KPLFKAK---VGGGVWRIKHHPEIFHRLLAACMHN-GAKILDSSDKV  287 (339)
T ss_pred             CccccCc---cccceEEEEecchhhhHHHHHHHhc-CceEEEecccc
Confidence            5555543   55899999999843  334444334 47777776554

>KOG1064|consensus

Probab=99.26  E-value=1.1e-10  Score=122.36  Aligned_cols=254  Identities=17%  Similarity=0.249  Sum_probs=172.0

Q ss_pred             CEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceece
Q psy15995        285 SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQ  364 (683)
Q Consensus       285 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  364 (683)
                      +.+.....++...-|..+.+.....-    +-..+.++.-+|...+.++|+.||.+++|....++.+..+..        
T Consensus      2181 ~~~~~~n~~~~~~tq~~~~~~~~~k~----~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt-------- 2248 (2439)
T KOG1064|consen 2181 NRFTPSNLPWLGSTQTSRGASVMIKH----PVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRT-------- 2248 (2439)
T ss_pred             ccCCcccCCccccceecccceeEeec----ccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeec--------
Confidence            33444444555555554433332222    456788888889888999999999999999887776554421        


Q ss_pred             EEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCC
Q psy15995        365 VSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGH  444 (683)
Q Consensus       365 ~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~  444 (683)
                                                        .+ ...|+.+.|+.+|+.+..+..||.+.+|....  ......+.|
T Consensus      2249 ----------------------------------~g-~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p--k~~~s~qch 2291 (2439)
T KOG1064|consen 2249 ----------------------------------AG-NSRVTRSRFNHQGNKFGIVDGDGDLSLWQASP--KPYTSWQCH 2291 (2439)
T ss_pred             ----------------------------------cC-cchhhhhhhcccCCceeeeccCCceeecccCC--cceeccccC
Confidence                                              11 26788899999999999999999999998872  122222345


Q ss_pred             CcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCC
Q psy15995        445 GNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEP  524 (683)
Q Consensus       445 ~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  524 (683)
                      ......+.|-+..+++++.                                                             
T Consensus      2292 nk~~~Df~Fi~s~~~tag~------------------------------------------------------------- 2310 (2439)
T KOG1064|consen 2292 NKALSDFRFIGSLLATAGR------------------------------------------------------------- 2310 (2439)
T ss_pred             Cccccceeeeehhhhcccc-------------------------------------------------------------
Confidence            5554444443333332221                                                             


Q ss_pred             cEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccce
Q psy15995        525 SSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEW  604 (683)
Q Consensus       525 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~  604 (683)
                                    .+.++.+.+||.--..........|.+.++++++.|..+.|++|+.+|.|++||+...++++... 
T Consensus      2311 --------------s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~- 2375 (2439)
T KOG1064|consen 2311 --------------SSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQ- 2375 (2439)
T ss_pred             --------------CCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhh-
Confidence                          12456788888654433333345699999999999999999999999999999999888875432 


Q ss_pred             eeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCe-----eEEEEccCCeEEEeeCCCc
Q psy15995        605 GFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQI-----TRLQWLDNDLLVSVGQDCN  674 (683)
Q Consensus       605 ~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v-----~~l~~~~~~~l~s~~~d~~  674 (683)
                            .    +. ...++++|+..|.++||++.....+..++..|....+     ..+..-..++|.+++.||+
T Consensus      2376 ------~----~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ak~gfFr~~g~Q~~v~~~nrifsCgad~~ 2439 (2439)
T KOG1064|consen 2376 ------A----LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPSEHAKQGFFRNIGMQINVGQCNRIFSCGADGT 2439 (2439)
T ss_pred             ------h----hh-hhheeeccCcccceEEEEccccchhhcCchhhcccchhhhcCceeeeccCceEEEecCCCC
Confidence                  1    33 5678999999999999999998777666543322211     1121125668999999874

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.24  E-value=1.4e-08  Score=99.26  Aligned_cols=303  Identities=10%  Similarity=0.097  Sum_probs=183.2

Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeecccccc-Ce-E-----EEEECC--CCCEEEEEcCCCcEEEEeCCCCeeEEeccCCc
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTKQEHSR-FV-Q-----AVRYSP--SGSHFASAGFDGKVFLYDGASADLVSELGNPA  314 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~-~v-~-----~~~~~~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~  314 (683)
                      .+++++.++.+.-+|..+++.+-....... .. .     .+.-.|  ++..++.++.+|.++.+|.++|+.+...... 
T Consensus        71 ~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-  149 (394)
T PRK11138         71 KVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTKVA-  149 (394)
T ss_pred             EEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCcccccCC-
Confidence            477777888888899888887765432210 00 0     000011  3456778888999999999999988877642 


Q ss_pred             cccCeEE-EEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCccee--ceEEEEecCCEEEEEecCCcEEEEecCCC
Q psy15995        315 HKGGVYA-VAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVED--QQVSCLWQGDYLLTVSLSGFISYLDVNNP  391 (683)
Q Consensus       315 ~~~~i~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~g~i~~~~~~~~  391 (683)
                        ..+.+ ...  .+..++.++.++.+..+|.++++.+.++........  ........+..++++..+|.+..+|..++
T Consensus       150 --~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G  225 (394)
T PRK11138        150 --GEALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQG  225 (394)
T ss_pred             --CceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEccCC
Confidence              22221 111  245677788889999999999998877754321100  00111123456888888999998888775


Q ss_pred             Ccceeeeeecc---c---cEEEEEEeC--CCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEc
Q psy15995        392 STPIRVIKGHN---K---PITALALSP--DRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGI  463 (683)
Q Consensus       392 ~~~~~~~~~~~---~---~v~~~~~~~--~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~  463 (683)
                      ...-..-....   .   ....+..+|  .+..++.++.+|.+..+|..+++..-.....   ....+...++.++.++.
T Consensus       226 ~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~---~~~~~~~~~~~vy~~~~  302 (394)
T PRK11138        226 QLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYG---SVNDFAVDGGRIYLVDQ  302 (394)
T ss_pred             hhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCC---CccCcEEECCEEEEEcC
Confidence            43222110000   0   011111122  3456777788999999999998876544322   12234556888999999


Q ss_pred             CCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCC
Q psy15995        464 DDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADS  543 (683)
Q Consensus       464 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg  543 (683)
                      ++.+..+|..++..........                                   .....+..+  .+.+|++++.+|
T Consensus       303 ~g~l~ald~~tG~~~W~~~~~~-----------------------------------~~~~~sp~v--~~g~l~v~~~~G  345 (394)
T PRK11138        303 NDRVYALDTRGGVELWSQSDLL-----------------------------------HRLLTAPVL--YNGYLVVGDSEG  345 (394)
T ss_pred             CCeEEEEECCCCcEEEcccccC-----------------------------------CCcccCCEE--ECCEEEEEeCCC
Confidence            9999999988764311100000                                   000111111  255778889999


Q ss_pred             cEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEEC
Q psy15995        544 KVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRV  593 (683)
Q Consensus       544 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~  593 (683)
                      .+...|..+++...+.............+  .+..|+.++.||.++.++.
T Consensus       346 ~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        346 YLHWINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAITR  393 (394)
T ss_pred             EEEEEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence            99999999998775554422211111122  3457888899999988765

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.23  E-value=7.8e-09  Score=100.20  Aligned_cols=215  Identities=9%  Similarity=0.009  Sum_probs=132.5

Q ss_pred             CeEEEEeCCCCcccccccCcccceEEEEECCCCcE-EEEecC---CCCEEEEeCCCcccccccccccCCCCcccceeeee
Q psy15995         65 NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFY-IASGDI---SGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLS  140 (683)
Q Consensus        65 ~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~-las~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (683)
                      ..|.+-|.+.........+ . .+....|||||+. ++..+.   +..|.++|+.+++...-....              
T Consensus       169 ~~l~~~d~dg~~~~~~~~~-~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~--------------  232 (419)
T PRK04043        169 SNIVLADYTLTYQKVIVKG-G-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQ--------------  232 (419)
T ss_pred             ceEEEECCCCCceeEEccC-C-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCC--------------
Confidence            3788888776654433333 3 7889999999985 554333   346999999887543322211              


Q ss_pred             ecceeeeEeeccceEEEee-cC--CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCce-EEEEEEc
Q psy15995        141 LTSIRNILVLSIGFYIASG-DI--SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRER-FGHVFMS  216 (683)
Q Consensus       141 ~~~i~~~~~s~~~~~l~~~-~~--d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~-~~~~~~~  216 (683)
                       .......|+|||+.|+.. +.  +..|.++|+.+++...   +....+......|+|||+.++..+..... .+++.+.
T Consensus       233 -g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~---LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl  308 (419)
T PRK04043        233 -GMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQ---ITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKL  308 (419)
T ss_pred             -CcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEE---cccCCCccCccEECCCCCEEEEEECCCCCceEEEEEC
Confidence             233456799999877653 32  3568888887775332   22222334456899999999998865332 3556666


Q ss_pred             cCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCC--------CeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEE
Q psy15995        217 ETGTSVGEISGQSKPINSCDFKPSRPFRIITGSED--------NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFA  288 (683)
Q Consensus       217 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  288 (683)
                      +.++....... ...  ...|+|+|+.++++....        ..|.+.|+.++.... +... .......|+|||+.++
T Consensus       309 ~~g~~~rlt~~-g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~-LT~~-~~~~~p~~SPDG~~I~  383 (419)
T PRK04043        309 NSGSVEQVVFH-GKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRR-LTAN-GVNQFPRFSSDGGSIM  383 (419)
T ss_pred             CCCCeEeCccC-CCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEE-CCCC-CCcCCeEECCCCCEEE
Confidence            66655333221 111  248999999855555443        367888887776533 3322 2233588999999777


Q ss_pred             EEcCC-C--cEEEEeCCCC
Q psy15995        289 SAGFD-G--KVFLYDGASA  304 (683)
Q Consensus       289 ~~~~d-g--~i~iw~~~~~  304 (683)
                      ..+.+ +  .+.+.++...
T Consensus       384 f~~~~~~~~~L~~~~l~g~  402 (419)
T PRK04043        384 FIKYLGNQSALGIIRLNYN  402 (419)
T ss_pred             EEEccCCcEEEEEEecCCC
Confidence            65543 2  3666676443

>KOG0309|consensus

Probab=99.23  E-value=7.5e-11  Score=112.52  Aligned_cols=289  Identities=15%  Similarity=0.206  Sum_probs=190.2

Q ss_pred             eecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCC--eEEEEecCCceEEEEEEcc
Q psy15995        140 SLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQ--RMVVVGEGRERFGHVFMSE  217 (683)
Q Consensus       140 ~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~~~~~~~~~~~~~  217 (683)
                      ...++..+.++|.|+-+|.++.-|. .+-|+...-.......+...-.+-...|+|...  +-++......  ..+|.+.
T Consensus        23 v~~~~~a~si~p~grdi~lAsr~gl-~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qk--aiiwnlA   99 (1081)
T KOG0309|consen   23 VDGGFNAVSINPSGRDIVLASRQGL-YIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQK--AIIWNLA   99 (1081)
T ss_pred             ecCcccceeeccccchhhhhhhcCe-EEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcch--hhhhhhh
Confidence            3467888999999999999887764 445555432111111111224566777887532  2222222222  2344443


Q ss_pred             ---CCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce-eeeccccccCeEEEEECCCCCEEEEEcCC
Q psy15995        218 ---TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF-KMTKQEHSRFVQAVRYSPSGSHFASAGFD  293 (683)
Q Consensus       218 ---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  293 (683)
                         .......+.+|...|+.+.|+|..+-.+++++-|-.+..||++.... ......-...-..++|+.....+.+.+..
T Consensus       100 ~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg  179 (1081)
T KOG0309|consen  100 KSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHG  179 (1081)
T ss_pred             cCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccC
Confidence               33455567899999999999999999999999999999999876543 33333334456778998876666667777


Q ss_pred             CcEEEEeCCCCe-eEEeccCCccccCeEEEEEcc-CCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecC
Q psy15995        294 GKVFLYDGASAD-LVSELGNPAHKGGVYAVAWKP-DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQG  371 (683)
Q Consensus       294 g~i~iw~~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (683)
                      ..|.+||.+.|. .+..++.  |...|..+.|.. ....+.+++.||+|+.||.+..................-.+.|-+
T Consensus       180 ~~i~vwd~r~gs~pl~s~K~--~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg  257 (1081)
T KOG0309|consen  180 NDIFVWDLRKGSTPLCSLKG--HVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFG  257 (1081)
T ss_pred             CceEEEeccCCCcceEEecc--cceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccC
Confidence            889999998764 5566654  888888888865 344688899999999999876544333333333333333333322


Q ss_pred             C-----------EEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC----------CEEEEEeCCCcEEEEc
Q psy15995        372 D-----------YLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR----------GTVFTGSHDGFITRWN  430 (683)
Q Consensus       372 ~-----------~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------~~l~~~~~dg~i~~w~  430 (683)
                      +           .+..-..+.....|+......++..+.+|.+.|....|-..+          -.|++-+.|..+++|-
T Consensus       258 ~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWp  337 (1081)
T KOG0309|consen  258 EGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWP  337 (1081)
T ss_pred             ceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeee
Confidence            2           222222233334455556677899999999988877664422          3799999999999997


Q ss_pred             CCC
Q psy15995        431 AKT  433 (683)
Q Consensus       431 ~~~  433 (683)
                      +.+
T Consensus       338 I~~  340 (1081)
T KOG0309|consen  338 IDS  340 (1081)
T ss_pred             ccH
Confidence            754

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.22  E-value=3e-08  Score=96.99  Aligned_cols=308  Identities=12%  Similarity=0.074  Sum_probs=186.6

Q ss_pred             ceEEEeecCCccEEEEeccccceeeeccccccCCCee-----EEEEcC--CCCeEEEEecCCceEEEEEEccCCCceeee
Q psy15995        153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIK-----DIAWSP--DNQRMVVVGEGRERFGHVFMSETGTSVGEI  225 (683)
Q Consensus       153 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~-----~~~~s~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  225 (683)
                      +..+.+++.+|.+.-+|..+|+.+.+..+....+...     .+.-.|  ++..+++++.+.  .+..++.++|+.+.+.
T Consensus        69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g--~l~ald~~tG~~~W~~  146 (394)
T PRK11138         69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKG--QVYALNAEDGEVAWQT  146 (394)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCC--EEEEEECCCCCCcccc
Confidence            4577777888999999999999888776653111100     000011  244555554432  2566777788887776


Q ss_pred             ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEE-EEECC--CCCEEEEEcCCCcEEEEeCC
Q psy15995        226 SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQA-VRYSP--SGSHFASAGFDGKVFLYDGA  302 (683)
Q Consensus       226 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~-~~~~~--~~~~l~~~~~dg~i~iw~~~  302 (683)
                      ............. ++  .++.+..++.+.-+|..+++.+............ ..-+|  .+..++.++.+|.+..+|..
T Consensus       147 ~~~~~~~ssP~v~-~~--~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~  223 (394)
T PRK11138        147 KVAGEALSRPVVS-DG--LVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLME  223 (394)
T ss_pred             cCCCceecCCEEE-CC--EEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEcc
Confidence            5443222222222 33  4777888999999999999988766532111000 00111  13356777889999999999


Q ss_pred             CCeeEEeccCCccc--c---CeEEEEEcc--CCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEE
Q psy15995        303 SADLVSELGNPAHK--G---GVYAVAWKP--DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLL  375 (683)
Q Consensus       303 ~~~~~~~~~~~~~~--~---~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  375 (683)
                      +|+.+.........  .   ....+..+|  .+..++.++.+|.+..+|..+++.+.+......     ..+...++.++
T Consensus       224 ~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~-----~~~~~~~~~vy  298 (394)
T PRK11138        224 QGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGSV-----NDFAVDGGRIY  298 (394)
T ss_pred             CChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCCc-----cCcEEECCEEE
Confidence            99876654321100  0   011111122  355677788899999999999987765543221     11234678888


Q ss_pred             EEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeC
Q psy15995        376 TVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATG  455 (683)
Q Consensus       376 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~  455 (683)
                      +++.+|.+..+|..++...-+.-........+..+  .+..++.++.+|.+...|..+++...................+
T Consensus       299 ~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~~  376 (394)
T PRK11138        299 LVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVVAD  376 (394)
T ss_pred             EEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEEEC
Confidence            99999999999998754322211100111222222  2467888999999999999999877655332222222233457


Q ss_pred             CeEEEEEcCCeEEEEeC
Q psy15995        456 ELLYTCGIDDTIKQVDL  472 (683)
Q Consensus       456 ~~l~~~~~d~~i~~~~~  472 (683)
                      +.|+.++.||.+..++.
T Consensus       377 ~~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        377 DKLLIQARDGTVYAITR  393 (394)
T ss_pred             CEEEEEeCCceEEEEeC
Confidence            89999999999988764

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=99.22  E-value=2.9e-08  Score=87.87  Aligned_cols=237  Identities=12%  Similarity=0.126  Sum_probs=161.9

Q ss_pred             CeEEEeeCC-CCCeEEEec--CCeEEEEeCCCCcccccccCcccce--EEEEECCCCcEEEEec-----CCCCEEEEeCC
Q psy15995         46 QPIVLGGDP-KGKNFLYTN--GNSVIIRNIENPAISDIYTEHSCAV--NVAKYSPSGFYIASGD-----ISGKVRIWDTV  115 (683)
Q Consensus        46 ~~~~~~~s~-~~~~l~~~~--~~~i~v~~~~~~~~~~~~~~h~~~v--~~~~~s~d~~~las~~-----~dg~i~iwd~~  115 (683)
                      +.-.++.+| ++..++++.  +....++|..+++....+....+.-  -.-.||+||++|.+.-     ..|.|-|||..
T Consensus         6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~   85 (305)
T PF07433_consen    6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA   85 (305)
T ss_pred             cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence            455667899 556666663  5689999999998776554322111  1347999999999864     34679999998


Q ss_pred             -CcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC------------------CccEEEEecccccee
Q psy15995        116 -NKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI------------------SGKVRIWDTVNKEHI  176 (683)
Q Consensus       116 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------------------d~~i~iwd~~~~~~~  176 (683)
                       +-+.+.++..+.              -....+.+.|||+.|+++..                  +-++.+-|..+|+.+
T Consensus        86 ~~~~ri~E~~s~G--------------IGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll  151 (305)
T PF07433_consen   86 RGYRRIGEFPSHG--------------IGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALL  151 (305)
T ss_pred             CCcEEEeEecCCC--------------cChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCcee
Confidence             445555555544              34567889999977776432                  445777888888888


Q ss_pred             eeccc--cccCCCeeEEEEcCCCCeEEEEecCCc---eEEEEEEccCCCceeeee-------cCCcCeEEEEeecCCCeE
Q psy15995        177 LKNEF--HPIGGPIKDIAWSPDNQRMVVVGEGRE---RFGHVFMSETGTSVGEIS-------GQSKPINSCDFKPSRPFR  244 (683)
Q Consensus       177 ~~~~~--~~~~~~i~~~~~s~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~  244 (683)
                      .+..+  .-+.-.|..+++.++|..++..-....   ..-.+...+.++.+..+.       .-.+.+-++++++++...
T Consensus       152 ~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~i  231 (305)
T PF07433_consen  152 EQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLI  231 (305)
T ss_pred             eeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEE
Confidence            77777  346778999999999987776654322   122344444444333332       335678999999999976


Q ss_pred             EEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEe
Q psy15995        245 IITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD  300 (683)
Q Consensus       245 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  300 (683)
                      .+++-..+.+.+||..+++.+....-  ..+..++-.+++ ++++.+ .|.+...+
T Consensus       232 a~tsPrGg~~~~~d~~tg~~~~~~~l--~D~cGva~~~~~-f~~ssG-~G~~~~~~  283 (305)
T PF07433_consen  232 AVTSPRGGRVAVWDAATGRLLGSVPL--PDACGVAPTDDG-FLVSSG-QGQLIRLS  283 (305)
T ss_pred             EEECCCCCEEEEEECCCCCEeecccc--CceeeeeecCCc-eEEeCC-CccEEEcc
Confidence            77888889999999999998776643  346677777776 555544 46544433

>KOG3914|consensus

Probab=99.22  E-value=2.3e-10  Score=101.48  Aligned_cols=156  Identities=17%  Similarity=0.192  Sum_probs=115.9

Q ss_pred             CCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcc--eeecCCcCeeEEEECCCCCEEEEEeCC---CeEEEEECCCCc
Q psy15995        523 EPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPK--AELDHLGPVTDCSFSPSNEYLVASDAH---RKVVLYRVPDFE  597 (683)
Q Consensus       523 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~i~~~~~~~  597 (683)
                      .+..+..+++++++|++..+....++++.......+  ....-...-+++.|-.+......+...   ..+.+|....+.
T Consensus        64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~  143 (390)
T KOG3914|consen   64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR  143 (390)
T ss_pred             cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccC
Confidence            456677889999999999998888888766553111  111123344555565555555555444   455556555554


Q ss_pred             cccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEccCCeEEEeeCCCcEEE
Q psy15995        598 LAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKI  677 (683)
Q Consensus       598 ~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~v~v  677 (683)
                      ..  ...+ |-..++.++||||++++++++.|..|++-.+......-.+..+ |..-|..++..++..|+|+|.|++|++
T Consensus       144 ~~--~~lG-hvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclG-H~eFVS~isl~~~~~LlS~sGD~tlr~  219 (390)
T KOG3914|consen  144 CE--PILG-HVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLG-HKEFVSTISLTDNYLLLSGSGDKTLRL  219 (390)
T ss_pred             cc--hhhh-hhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccc-cHhheeeeeeccCceeeecCCCCcEEE
Confidence            43  2333 9999999999999999999999999999998887766666544 589999999889999999999999999


Q ss_pred             Eeecc
Q psy15995        678 WEIAP  682 (683)
Q Consensus       678 w~~~~  682 (683)
                      |++..
T Consensus       220 Wd~~s  224 (390)
T KOG3914|consen  220 WDITS  224 (390)
T ss_pred             Eeccc
Confidence            99875

>KOG1064|consensus

Probab=99.21  E-value=1.8e-10  Score=120.86  Aligned_cols=197  Identities=15%  Similarity=0.274  Sum_probs=156.2

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCc
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTS  221 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~  221 (683)
                      ..+.++.-.|...+-++|+.||.+++|....+..+......+. ..++.+.|+.+|....++..++.  +.+|... .++
T Consensus      2209 ~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~-s~vtr~~f~~qGnk~~i~d~dg~--l~l~q~~-pk~ 2284 (2439)
T KOG1064|consen 2209 ENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGN-SRVTRSRFNHQGNKFGIVDGDGD--LSLWQAS-PKP 2284 (2439)
T ss_pred             CceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCc-chhhhhhhcccCCceeeeccCCc--eeecccC-Ccc
Confidence            5577777788888999999999999999999887776665554 88999999999998888777643  3444443 566


Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEe---eCCCeEEEEcC--CCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcE
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITG---SEDNTIAVFEG--PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKV  296 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~---~~d~~i~iw~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  296 (683)
                      ....+.|......+.|-..   .+++.   +.++.+.+||.  ........ ..|.+.++++++.|..+.|++|+.+|.|
T Consensus      2285 ~~s~qchnk~~~Df~Fi~s---~~~tag~s~d~~n~~lwDtl~~~~~s~v~-~~H~~gaT~l~~~P~~qllisggr~G~v 2360 (2439)
T KOG1064|consen 2285 YTSWQCHNKALSDFRFIGS---LLATAGRSSDNRNVCLWDTLLPPMNSLVH-TCHDGGATVLAYAPKHQLLISGGRKGEV 2360 (2439)
T ss_pred             eeccccCCccccceeeeeh---hhhccccCCCCCcccchhcccCcccceee-eecCCCceEEEEcCcceEEEecCCcCcE
Confidence            6677889999999988873   35554   34789999993  33333333 7899999999999999999999999999


Q ss_pred             EEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecC
Q psy15995        297 FLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGN  358 (683)
Q Consensus       297 ~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  358 (683)
                      ++||++..+.++.++.           +. ...++++++..|.++||++.....+..+...+
T Consensus      2361 ~l~D~rqrql~h~~~~-----------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ 2410 (2439)
T KOG1064|consen 2361 CLFDIRQRQLRHTFQA-----------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPSEH 2410 (2439)
T ss_pred             EEeehHHHHHHHHhhh-----------hh-hhheeeccCcccceEEEEccccchhhcCchhh
Confidence            9999998877766642           33 46689999999999999999888777776554

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.19  E-value=3.8e-08  Score=106.58  Aligned_cols=259  Identities=12%  Similarity=0.099  Sum_probs=162.1

Q ss_pred             EEEEECCC-CcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec-CCccEE
Q psy15995         89 NVAKYSPS-GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD-ISGKVR  166 (683)
Q Consensus        89 ~~~~~s~d-~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~  166 (683)
                      ..++++++ ++..++-+.++.|.+||.... .+..+......+................+++.+++..|.++. ..+.|+
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~-~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir  649 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGN-FIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR  649 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCCCC-EEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence            46788874 556666677888999997644 332222111000000000111234578899999887665544 457799


Q ss_pred             EEeccccceeeecc-------ccc-------cCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeee------
Q psy15995        167 IWDTVNKEHILKNE-------FHP-------IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS------  226 (683)
Q Consensus       167 iwd~~~~~~~~~~~-------~~~-------~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------  226 (683)
                      ++|..++.......       ..+       .-.....++|+|++..++++..+... +.+++...+... .+.      
T Consensus       650 ~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~-I~v~d~~~g~v~-~~~G~G~~~  727 (1057)
T PLN02919        650 EIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQ-IWEYNISDGVTR-VFSGDGYER  727 (1057)
T ss_pred             EEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCe-EEEEECCCCeEE-EEecCCccc
Confidence            99987764321100       000       01234689999976666665544332 455555544321 111      


Q ss_pred             ---c------CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc---------------------ccccCeE
Q psy15995        227 ---G------QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ---------------------EHSRFVQ  276 (683)
Q Consensus       227 ---~------~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~---------------------~~~~~v~  276 (683)
                         +      .-.....++++|+++.++++-+.++.|++||..++.......                     ..-....
T Consensus       728 ~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~  807 (1057)
T PLN02919        728 NLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPL  807 (1057)
T ss_pred             cCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCc
Confidence               1      112456799999998767777888999999988765321110                     0011346


Q ss_pred             EEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccC-----------CccccCeEEEEEccCCCEEEEEECCCcEEEEEC
Q psy15995        277 AVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN-----------PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI  345 (683)
Q Consensus       277 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  345 (683)
                      .++++++|+.+++-..++.|++||..++........           .+.-.....++++++|+.+++-+.++.|++||+
T Consensus       808 Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~  887 (1057)
T PLN02919        808 GVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDL  887 (1057)
T ss_pred             eeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEEC
Confidence            889999999888888899999999988766543321           012235778999999998888888999999999


Q ss_pred             CCCce
Q psy15995        346 ETKSV  350 (683)
Q Consensus       346 ~~~~~  350 (683)
                      .+++.
T Consensus       888 ~~~~~  892 (1057)
T PLN02919        888 NKGEA  892 (1057)
T ss_pred             CCCcc
Confidence            98765

>KOG4532|consensus

Probab=99.18  E-value=1e-08  Score=85.92  Aligned_cols=261  Identities=14%  Similarity=0.127  Sum_probs=164.5

Q ss_pred             CCeEEEEeCCCCc--ccccccCcccceEEEEECC-----CCcEEEEecCCCCEEEEeCCCcccccccc-cccCCCCcccc
Q psy15995         64 GNSVIIRNIENPA--ISDIYTEHSCAVNVAKYSP-----SGFYIASGDISGKVRIWDTVNKEHILKNE-FHPIGGPIKDI  135 (683)
Q Consensus        64 ~~~i~v~~~~~~~--~~~~~~~h~~~v~~~~~s~-----d~~~las~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~  135 (683)
                      ...+-+|+.-+..  .....       +.+.|-|     ..-+||.|+..|...+|...+.+....+- .+..+      
T Consensus        51 t~sv~i~~~y~N~~~iv~~y-------~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~------  117 (344)
T KOG4532|consen   51 TISVPINSHYSNPKGIVEFY-------TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNND------  117 (344)
T ss_pred             eeeeEeccccCCchhhEEee-------ecccccchHhhccccEEEeccccceeeeecccCcccceeeecccccc------
Confidence            3456667665443  22222       3344544     33589999999999999998664333221 11100      


Q ss_pred             eeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEE
Q psy15995        136 GTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFM  215 (683)
Q Consensus       136 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~  215 (683)
                           ..-+...+.+  ...+..++.|.++++.+++.+........+  .-.+.++++++|++++++++..+..+.+-.+
T Consensus       118 -----v~~~~r~cd~--~~~~~i~sndht~k~~~~~~~s~~~~~h~~--~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id  188 (344)
T KOG4532|consen  118 -----VTLVKRYCDL--KFPLNIASNDHTGKTMVVSGDSNKFAVHNQ--NLTQNSLHYSNDPSWGSSVGDSRRVFRYAID  188 (344)
T ss_pred             -----hhhhhhhccc--ccceeeccCCcceeEEEEecCcccceeecc--ccceeeeEEcCCCceEEEecCCCcceEEEeC
Confidence                 0111111111  224566777888888887765322111111  1238899999999999999988775444333


Q ss_pred             ccCCCcee-eeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceee-----eccccccCeEEEEECCCCC--EE
Q psy15995        216 SETGTSVG-EISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM-----TKQEHSRFVQAVRYSPSGS--HF  287 (683)
Q Consensus       216 ~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~--~l  287 (683)
                      -+....+. ......+.-.+..|+.... .++++..||++.|||++......     +...|.+.++.+.|++.|.  +|
T Consensus       189 ~~sey~~~~~~a~t~D~gF~~S~s~~~~-~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLL  267 (344)
T KOG4532|consen  189 DESEYIENIYEAPTSDHGFYNSFSENDL-QFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLL  267 (344)
T ss_pred             CccceeeeeEecccCCCceeeeeccCcc-eEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEE
Confidence            33333344 3445566667888988887 49999999999999987654333     2345889999999998765  55


Q ss_pred             EEEcCCCcEEEEeCCCCeeEEeccCCc-----cc-cCeEEEEEccCCCEEEEEECCCcEEEEECCCC
Q psy15995        288 ASAGFDGKVFLYDGASADLVSELGNPA-----HK-GGVYAVAWKPDGTQLLTASGDKTCKLWDIETK  348 (683)
Q Consensus       288 ~~~~~dg~i~iw~~~~~~~~~~~~~~~-----~~-~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  348 (683)
                      +..-.-+.+.+.|++++...+.+..+.     |. ..|..-.|+.++....+.+++ .+.-|++...
T Consensus       268 f~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~-~~ae~ni~sr  333 (344)
T KOG4532|consen  268 FISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNEL-QGAEYNILSR  333 (344)
T ss_pred             EEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCcccccccch-hhheeecccc
Confidence            555556889999999987666554322     22 337777888777777666554 3555665543

>KOG1897|consensus

Probab=99.18  E-value=9.2e-06  Score=81.85  Aligned_cols=634  Identities=13%  Similarity=0.110  Sum_probs=307.2

Q ss_pred             CCceeeecccceeecCCCcccCC-CeE-EEeeCCCCCeEEEe-cCCeEEEEeCC-CCcccc------cccCcccceEEEE
Q psy15995         23 GKNFLYTNGNKYIFATLPRTQRG-QPI-VLGGDPKGKNFLYT-NGNSVIIRNIE-NPAISD------IYTEHSCAVNVAK   92 (683)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~s~~~~~l~~~-~~~~i~v~~~~-~~~~~~------~~~~h~~~v~~~~   92 (683)
                      |..++.+..........|...+. .+. .-..+++|.+...+ .+|.+...=+. +++...      .+-|-..-..|+.
T Consensus       234 ge~~I~Y~~~~~~~ai~p~~~~~~t~~~~~~v~~~~~~yLl~d~~G~Lf~l~l~~~~e~~s~~~lkve~lge~siassi~  313 (1096)
T KOG1897|consen  234 GEEFIVYMSGDNFVAIAPLTAEQSTIVCYGRVDLQGSRYLLGDEDGMLFKLLLSHTGETVSGLDLKVEYLGETSIASSIN  313 (1096)
T ss_pred             eeeEEEEeeCCceeEecccccCCceEEEcccccCCccEEEEecCCCcEEEEEeecccccccceEEEEEecCCcchhhhhh
Confidence            34455554444443333332222 222 23346677665555 45655544333 222211      1225556667777


Q ss_pred             ECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccc----eEEEee---cCCccE
Q psy15995         93 YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIG----FYIASG---DISGKV  165 (683)
Q Consensus        93 ~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~----~~l~~~---~~d~~i  165 (683)
                      +-++| .|.+||.-|.=.+-.+.+....        +.-...+.+.....+|..++.-...    ..++++   ..||++
T Consensus       314 ~L~ng-~lFvGS~~gdSqLi~L~~e~d~--------gsy~~ilet~~NLgPI~Dm~Vvd~d~q~q~qivtCsGa~kdgSL  384 (1096)
T KOG1897|consen  314 YLDNG-VLFVGSRFGDSQLIKLNTEPDV--------GSYVVILETFVNLGPIVDMCVVDLDRQGQGQIVTCSGAFKDGSL  384 (1096)
T ss_pred             cccCc-eEEEeccCCceeeEEccccCCC--------CchhhhhhhcccccceeeEEEEeccccCCceEEEEeCCCCCCcE
Confidence            77777 7888887776555555443211        1111122223333567777665532    244443   348999


Q ss_pred             EEEecccc-ceeeeccccccCCCeeEEE--EcCC-CCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCC
Q psy15995        166 RIWDTVNK-EHILKNEFHPIGGPIKDIA--WSPD-NQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSR  241 (683)
Q Consensus       166 ~iwd~~~~-~~~~~~~~~~~~~~i~~~~--~s~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  241 (683)
                      ++....-+ .......+++ -..+..+.  +.+. ..+++++-.+..   ++......-......+-......+..+.-+
T Consensus       385 RiiRngi~I~e~A~i~l~G-ikg~w~lk~~v~~~~d~ylvlsf~~eT---rvl~i~~e~ee~~~~gf~~~~~Tif~S~i~  460 (1096)
T KOG1897|consen  385 RIIRNGIGIDELASIDLPG-IKGMWSLKSMVDENYDNYLVLSFISET---RVLNISEEVEETEDPGFSTDEQTIFCSTIN  460 (1096)
T ss_pred             EEEecccccceeeEeecCC-ccceeEeeccccccCCcEEEEEeccce---EEEEEccceEEeccccccccCceEEEEccC
Confidence            99865433 1222333333 23455555  3332 225554443332   222222111111122222222333333211


Q ss_pred             CeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEE
Q psy15995        242 PFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYA  321 (683)
Q Consensus       242 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~  321 (683)
                      ...|+-... ..|++++-.  ........ .+.++..+.+.+...++.++.++.+...++..+. ++..........|.|
T Consensus       461 g~~lvQvTs-~~iRl~ss~--~~~~~W~~-p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~-l~e~~~~~~e~evaC  535 (1096)
T KOG1897|consen  461 GNQLVQVTS-NSIRLVSSA--GLRSEWRP-PGKITIGVVSANASQVVVAGGGLALFYLEIEDGG-LREVSHKEFEYEVAC  535 (1096)
T ss_pred             CceEEEEec-ccEEEEcch--hhhhcccC-CCceEEEEEeecceEEEEecCccEEEEEEeeccc-eeeeeeheecceeEE
Confidence            111222222 346666643  12222222 3344545555555577777767777777776665 233222235678999


Q ss_pred             EEEccC--C----CEEEEEECCCcEEEE-ECCCCceeeEEEecCcceeceE---EEEecCCEEEEEecCCcEEEEecCCC
Q psy15995        322 VAWKPD--G----TQLLTASGDKTCKLW-DIETKSVVSEFIMGNQVEDQQV---SCLWQGDYLLTVSLSGFISYLDVNNP  391 (683)
Q Consensus       322 ~~~~~~--~----~~l~~~~~dg~i~iw-d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~g~i~~~~~~~~  391 (683)
                      +.++|-  +    +.++.|..+..+.+. -..+...+.........-+..+   .+-.+..++.++..+|.+..|.+...
T Consensus       536 LDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~  615 (1096)
T KOG1897|consen  536 LDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDIN  615 (1096)
T ss_pred             EecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEcc
Confidence            999873  2    257777665554433 3333333333322222222222   22225789999999999888766543


Q ss_pred             Ccceeeee---eccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe--CCeEEEEEcCCe
Q psy15995        392 STPIRVIK---GHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDT  466 (683)
Q Consensus       392 ~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~  466 (683)
                      .-.....+   -...|+.--.|+..++.-+.+..|.-..+|..+..-............+..+.-+  ++.++++. .+.
T Consensus       616 tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~kLv~spls~kev~~~c~f~s~a~~d~l~~~~-~~~  694 (1096)
T KOG1897|consen  616 TGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNGKLVYSPLSLKEVNHMCPFNSDAYPDSLASAN-GGA  694 (1096)
T ss_pred             cceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCCcEEEeccchHHhhhhcccccccCCceEEEec-CCc
Confidence            22111111   1123444444555444333333444444444322111111100011111111111  23333332 334


Q ss_pred             EEEEeCCCCccc-CCceecCCCCceeeecCC-eEEEEEec----------------eEEEEeCCceeeeecC-------C
Q psy15995        467 IKQVDLSSNAYS-GPEVKLGSQPRGLDIDEN-TLVTVTVK----------------QISIVENGAKVSSLPI-------D  521 (683)
Q Consensus       467 i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~----------------~~~~~~~~~~~~~~~~-------~  521 (683)
                      +++..+..-+.. ....++...++.....+. ..+.....                .+.+++...-.....+       .
T Consensus       695 l~i~tid~iqkl~irtvpl~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~  774 (1096)
T KOG1897|consen  695 LTIGTIDEIQKLHIRTVPLGESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEFERNETA  774 (1096)
T ss_pred             eEEEEecchhhcceeeecCCCChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCceeEEeecccccccee
Confidence            444433322111 111233333333333321 11111111                1122221111111111       1


Q ss_pred             CCCcEEEEccC-CCEEEEEcC----------CCcEEEEEcCC-CccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEE
Q psy15995        522 YEPSSISLDHE-HGLVAVGGA----------DSKVHIYELNN-KSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVV  589 (683)
Q Consensus       522 ~~~~~~~~~~~-~~~l~~~~~----------dg~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~  589 (683)
                      ..+.+..+..| +.++++|+.          .|.|.+|.+.. +++.......-.+.+.++.. -+|++||+-  ...|+
T Consensus       775 ~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~-fngkllA~I--n~~vr  851 (1096)
T KOG1897|consen  775 LSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVE-FNGKLLAGI--NQSVR  851 (1096)
T ss_pred             eeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhh-hCCeEEEec--CcEEE
Confidence            22334446666 778888754          57899998887 33332233333445555432 267777754  46799


Q ss_pred             EEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCc--eeeEeecCCCCCCeeEEEEccCCeEE
Q psy15995        590 LYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPA--KHIIIKNAHPQSQITRLQWLDNDLLV  667 (683)
Q Consensus       590 i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~--~~~~~~~~~~~~~v~~l~~~~~~~l~  667 (683)
                      +|+..+.+.+.... . |..++..+...-.|..+++|+--+.+.+-.....+  .....+.. +....+++.+.+++.++
T Consensus       852 Lye~t~~~eLr~e~-~-~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evArD~-~p~Wmtaveil~~d~yl  928 (1096)
T KOG1897|consen  852 LYEWTTERELRIEC-N-ISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVARDY-NPNWMTAVEILDDDTYL  928 (1096)
T ss_pred             EEEccccceehhhh-c-ccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEeehhh-CccceeeEEEecCceEE
Confidence            99998885544332 2 77889999999899999999988877665554433  44444433 46789999999888788


Q ss_pred             EeeCCCcEEEEeec
Q psy15995        668 SVGQDCNTKIWEIA  681 (683)
Q Consensus       668 s~~~d~~v~vw~~~  681 (683)
                      -+-.+|.+.+-+.+
T Consensus       929 gae~~gNlf~v~~d  942 (1096)
T KOG1897|consen  929 GAENSGNLFTVRKD  942 (1096)
T ss_pred             eecccccEEEEEec
Confidence            78888888776654

>KOG4190|consensus

Probab=99.18  E-value=1.7e-10  Score=106.44  Aligned_cols=285  Identities=14%  Similarity=0.139  Sum_probs=189.4

Q ss_pred             ccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc-------cccccccccCCCCcccceeeeeecceeeeEeec
Q psy15995         79 DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE-------HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS  151 (683)
Q Consensus        79 ~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  151 (683)
                      ..+.||...|..++--.+.+-+++++.|.+|++|.+....       +..++..|              ..+|..+.|..
T Consensus       729 ~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aH--------------kk~i~~igfL~  794 (1034)
T KOG4190|consen  729 CNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAH--------------KKPIHDIGFLA  794 (1034)
T ss_pred             ecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhc--------------cCcccceeeee
Confidence            4578999999999887788889999999999999986431       22222233              37788999999


Q ss_pred             cceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCC-CCeEEEEecCCceEEEEEEccCCCceeeee----
Q psy15995        152 IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPD-NQRMVVVGEGRERFGHVFMSETGTSVGEIS----  226 (683)
Q Consensus       152 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----  226 (683)
                      +-++++++  ||.|.+||.--++.+......+..+.+..+.--++ .+.++.++......+.+++...++-..+++    
T Consensus       795 ~lr~i~Sc--D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna  872 (1034)
T KOG4190|consen  795 DLRSIASC--DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNA  872 (1034)
T ss_pred             ccceeeec--cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccC
Confidence            99998876  68999999988876654444444455555555554 455555554444446778877776655554    


Q ss_pred             -cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEE-EeCCCC
Q psy15995        227 -GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL-YDGASA  304 (683)
Q Consensus       227 -~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i-w~~~~~  304 (683)
                       +...-+.+++..+.|+. ++.+-.+|+|.+.|.++++.+...+........++ .|..+.|+....|.++.+ |...++
T Consensus       873 ~~Pna~~R~iaVa~~GN~-lAa~LSnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldg  950 (1034)
T KOG4190|consen  873 PGPNALTRAIAVADKGNK-LAAALSNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDG  950 (1034)
T ss_pred             CCCchheeEEEeccCcch-hhHHhcCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCC
Confidence             44566899999999996 99999999999999999998887776555444444 355667777777899998 887777


Q ss_pred             eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCC----ceeeEEEe-cCcceeceEEEEecCCEEEEEec
Q psy15995        305 DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETK----SVVSEFIM-GNQVEDQQVSCLWQGDYLLTVSL  379 (683)
Q Consensus       305 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~  379 (683)
                      ......+.+.  .+..-+  -.-|..|++......+.+|.-...    ..+.++.. ........+...|-+..+++|.+
T Consensus       951 imh~q~kppp--epahfl--qsvgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGne 1026 (1034)
T KOG4190|consen  951 IMHLQDKPPP--EPAHFL--QSVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGNE 1026 (1034)
T ss_pred             eeeeccCCCC--cchhhh--hccCceeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhhccCC
Confidence            6655554321  111111  112455666666566667642211    11112211 12334455666666667777777


Q ss_pred             CCcEEE
Q psy15995        380 SGFISY  385 (683)
Q Consensus       380 ~g~i~~  385 (683)
                      .|.|.+
T Consensus      1027 ~G~IaL 1032 (1034)
T KOG4190|consen 1027 HGAIAL 1032 (1034)
T ss_pred             CCceee
Confidence            777765

>KOG3914|consensus

Probab=99.17  E-value=6.1e-10  Score=98.90  Aligned_cols=118  Identities=22%  Similarity=0.320  Sum_probs=91.6

Q ss_pred             cEEEEccCCCEEEEEcCCCc---EEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccc
Q psy15995        525 SSISLDHEHGLVAVGGADSK---VHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHN  601 (683)
Q Consensus       525 ~~~~~~~~~~~l~~~~~dg~---i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~  601 (683)
                      +++.+..+...+.++..-|.   +.+|....  ...+..++|-+.++.++++||++++++++.|..|++-..+.--.+..
T Consensus       111 ~ai~~~~~~~sv~v~dkagD~~~~di~s~~~--~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Ies  188 (390)
T KOG3914|consen  111 TAISFIREDTSVLVADKAGDVYSFDILSADS--GRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIES  188 (390)
T ss_pred             ceeeeeeccceEEEEeecCCceeeeeecccc--cCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhh
Confidence            44555555555555544444   44444444  33356678999999999999999999999999999999988777777


Q ss_pred             cceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEe
Q psy15995        602 KEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIII  646 (683)
Q Consensus       602 ~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~  646 (683)
                      ..++ |..-|..++.-++ ..|++++.|++|++||+.+++.+..+
T Consensus       189 fclG-H~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L~t~  231 (390)
T KOG3914|consen  189 FCLG-HKEFVSTISLTDN-YLLLSGSGDKTLRLWDITSGKLLDTC  231 (390)
T ss_pred             hccc-cHhheeeeeeccC-ceeeecCCCCcEEEEecccCCccccc
Confidence            7776 9999999999865 45899999999999999999877443

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.17  E-value=7e-08  Score=82.56  Aligned_cols=242  Identities=16%  Similarity=0.161  Sum_probs=138.5

Q ss_pred             EEEECCCCcEEEEecCCCCEEEEeCCCc--ccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEE
Q psy15995         90 VAKYSPSGFYIASGDISGKVRIWDTVNK--EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRI  167 (683)
Q Consensus        90 ~~~~s~d~~~las~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~i  167 (683)
                      .++.+.||+.||... |..|.|=...+.  ..+.+......           ....-+.++||||+..||.+...|+|++
T Consensus         2 ~~~~~~~Gk~lAi~q-d~~iEiRsa~Ddf~si~~kcqVpkD-----------~~PQWRkl~WSpD~tlLa~a~S~G~i~v   69 (282)
T PF15492_consen    2 HLALSSDGKLLAILQ-DQCIEIRSAKDDFSSIIGKCQVPKD-----------PNPQWRKLAWSPDCTLLAYAESTGTIRV   69 (282)
T ss_pred             ceeecCCCcEEEEEe-ccEEEEEeccCCchheeEEEecCCC-----------CCchheEEEECCCCcEEEEEcCCCeEEE
Confidence            467889999999874 556777665443  11112211111           1145678999999999999999999999


Q ss_pred             Eeccccceeeecccc-----ccCCCeeEEEEcCCC------CeEEEEecCCceEEEEEEcc---CCCceeeee---cCCc
Q psy15995        168 WDTVNKEHILKNEFH-----PIGGPIKDIAWSPDN------QRMVVVGEGRERFGHVFMSE---TGTSVGEIS---GQSK  230 (683)
Q Consensus       168 wd~~~~~~~~~~~~~-----~~~~~i~~~~~s~~~------~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~  230 (683)
                      +|+...+.. .....     .....|..+.|.+-.      ..|++....+...-+.....   ..+....+.   .+..
T Consensus        70 fdl~g~~lf-~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~  148 (282)
T PF15492_consen   70 FDLMGSELF-VIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPH  148 (282)
T ss_pred             EecccceeE-EcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCC
Confidence            999864322 22111     122456677776532      13444433322212222221   222333332   2477


Q ss_pred             CeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCE--EEEEcCCC------cEEEEeCC
Q psy15995        231 PINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSH--FASAGFDG------KVFLYDGA  302 (683)
Q Consensus       231 ~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~~dg------~i~iw~~~  302 (683)
                      .|.++.++|..+.+++.|++...-..+           ......+++-..-.+..+  .++...|+      +-.+|.+-
T Consensus       149 Gi~~~vy~p~h~LLlVgG~~~~~~~~s-----------~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~  217 (282)
T PF15492_consen  149 GINSAVYHPKHRLLLVGGCEQNQDGMS-----------KASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIP  217 (282)
T ss_pred             ceeEEEEcCCCCEEEEeccCCCCCccc-----------cccccCceEEEEcCCCCcEEEccccCccccccccccceeecc
Confidence            899999999998756555554321111           112223443333333221  11222222      12334433


Q ss_pred             CCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEec
Q psy15995        303 SADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMG  357 (683)
Q Consensus       303 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  357 (683)
                      +.+......  .....|..|..+|||+.|++...+|.|.+|++.+-+...++...
T Consensus       218 ~~~~fs~~~--~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~  270 (282)
T PF15492_consen  218 SFKFFSRQG--QEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQD  270 (282)
T ss_pred             ceeeeeccc--cCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchh
Confidence            332222221  25678999999999999999999999999999988777766544

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.16  E-value=1.1e-09  Score=93.56  Aligned_cols=259  Identities=14%  Similarity=0.211  Sum_probs=172.2

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc---cccccccccCCCCcccceeeeeecceeeeEeeccce--EEEe
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE---HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF--YIAS  158 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~  158 (683)
                      ..+.|+++.|...|.|||+|+..|.|.++.-+...   -..-.+++.+.....-+.++.....|..+.|..++.  .++.
T Consensus        25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl  104 (460)
T COG5170          25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL  104 (460)
T ss_pred             ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence            45679999999999999999999999999866543   111112333333333444555557788898888764  4555


Q ss_pred             ecCCccEEEEeccccce-------------------------eee----------------ccccccCCCeeEEEEcCCC
Q psy15995        159 GDISGKVRIWDTVNKEH-------------------------ILK----------------NEFHPIGGPIKDIAWSPDN  197 (683)
Q Consensus       159 ~~~d~~i~iwd~~~~~~-------------------------~~~----------------~~~~~~~~~i~~~~~s~~~  197 (683)
                      .+.|.+|++|.+.....                         +..                .....|..-+.++.|+.|.
T Consensus       105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~  184 (460)
T COG5170         105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK  184 (460)
T ss_pred             ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence            67799999998765410                         000                0112345568889999998


Q ss_pred             CeEEEEecCCceEEEEEEccCCC---ceeeeecC-----CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceee---
Q psy15995        198 QRMVVVGEGRERFGHVFMSETGT---SVGEISGQ-----SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM---  266 (683)
Q Consensus       198 ~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~---  266 (683)
                      +.++++..-+   +.+|..+...   .+..++.|     ..-|++..|+|.....+.-.+..|.|++-|++......   
T Consensus       185 et~lSaDdLr---INLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~  261 (460)
T COG5170         185 ETLLSADDLR---INLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSK  261 (460)
T ss_pred             heeeecccee---eeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCch
Confidence            8888765432   5566555322   22233444     34688999999988778888899999999987432111   


Q ss_pred             -------------eccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC-eeEEeccCC----------ccccCe---
Q psy15995        267 -------------TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA-DLVSELGNP----------AHKGGV---  319 (683)
Q Consensus       267 -------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~----------~~~~~i---  319 (683)
                                   -+.+-...|..+.|+++|+++++-+. -++++||.+.. .++.++...          .....|   
T Consensus       262 klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdk  340 (460)
T COG5170         262 KLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDK  340 (460)
T ss_pred             hhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHHHHhhhhccceeee
Confidence                         11223456889999999999987764 68999998754 345554220          012223   


Q ss_pred             EEEEEccCCCEEEEEECCCcEEEEECC
Q psy15995        320 YAVAWKPDGTQLLTASGDKTCKLWDIE  346 (683)
Q Consensus       320 ~~~~~~~~~~~l~~~~~dg~i~iwd~~  346 (683)
                      ..+.|+.|.+.+++|+..+..-++-..
T Consensus       341 FeisfSgd~~~v~sgsy~NNfgiyp~~  367 (460)
T COG5170         341 FEISFSGDDKHVLSGSYSNNFGIYPTD  367 (460)
T ss_pred             EEEEecCCcccccccccccceeeeccc
Confidence            357788899999999988888777643

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.15  E-value=9.4e-08  Score=103.56  Aligned_cols=260  Identities=13%  Similarity=0.060  Sum_probs=163.6

Q ss_pred             ceeeeEeecc-ceEEEeecCCccEEEEeccccceeeeccccc------------cCCCeeEEEEcCCCCeEEEEecCCce
Q psy15995        143 SIRNILVLSI-GFYIASGDISGKVRIWDTVNKEHILKNEFHP------------IGGPIKDIAWSPDNQRMVVVGEGRER  209 (683)
Q Consensus       143 ~i~~~~~s~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------------~~~~i~~~~~s~~~~~l~~~~~~~~~  209 (683)
                      ....++++++ +...++-...+.|+++|..... +......+            .-.....+++.+++..++++...+. 
T Consensus       569 ~P~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~-i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~-  646 (1057)
T PLN02919        569 FPGKLAIDLLNNRLFISDSNHNRIVVTDLDGNF-IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENH-  646 (1057)
T ss_pred             CCceEEEECCCCeEEEEECCCCeEEEEeCCCCE-EEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCc-
Confidence            3456788875 6677777778899999986542 21111100            1124688999999888877765543 


Q ss_pred             EEEEEEccCCCceeeeecC-----------------CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeec----
Q psy15995        210 FGHVFMSETGTSVGEISGQ-----------------SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK----  268 (683)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~----  268 (683)
                      .+++++..++. +..+.+.                 -.....++++|++..++++...++.|++||..++......    
T Consensus       647 ~Ir~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~  725 (1057)
T PLN02919        647 ALREIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGY  725 (1057)
T ss_pred             eEEEEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCc
Confidence            24555554433 2222110                 1234679999966556788888899999998766542210    


Q ss_pred             ----cc------cccCeEEEEECCCCCEEE-EEcCCCcEEEEeCCCCeeEEeccC-------------------CccccC
Q psy15995        269 ----QE------HSRFVQAVRYSPSGSHFA-SAGFDGKVFLYDGASADLVSELGN-------------------PAHKGG  318 (683)
Q Consensus       269 ----~~------~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~-------------------~~~~~~  318 (683)
                          .+      .-.....++++|+++.|+ +-+.++.|++||+.++........                   ...-..
T Consensus       726 ~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~  805 (1057)
T PLN02919        726 ERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQH  805 (1057)
T ss_pred             cccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccC
Confidence                01      112456799999998554 555678999999887653211100                   001113


Q ss_pred             eEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeee
Q psy15995        319 VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI  398 (683)
Q Consensus       319 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~  398 (683)
                      ...++++++|+.+++-..++.|++||..++........+.                 .+..+|              ...
T Consensus       806 P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~-----------------~G~~dG--------------~~~  854 (1057)
T PLN02919        806 PLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGK-----------------AGFKDG--------------KAL  854 (1057)
T ss_pred             CceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCC-----------------cCCCCC--------------ccc
Confidence            4688999999988888889999999998765543221000                 000011              001


Q ss_pred             eeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCc
Q psy15995        399 KGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEN  436 (683)
Q Consensus       399 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~  436 (683)
                      .+.-.....++++++|+.+++-+.++.|++||+.+++.
T Consensus       855 ~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        855 KAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             ccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence            22334567899999999888888999999999988764

>KOG1897|consensus

Probab=99.14  E-value=1.3e-05  Score=80.83  Aligned_cols=600  Identities=15%  Similarity=0.116  Sum_probs=303.5

Q ss_pred             eCCCCCeEEEecCCeEEEEeCCCCcccccccCc-ccceEEEEECCCCcEEEEecCCCCEEEEeCC-Ccccccc--ccccc
Q psy15995         52 GDPKGKNFLYTNGNSVIIRNIENPAISDIYTEH-SCAVNVAKYSPSGFYIASGDISGKVRIWDTV-NKEHILK--NEFHP  127 (683)
Q Consensus        52 ~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h-~~~v~~~~~s~d~~~las~~~dg~i~iwd~~-~~~~~~~--~~~~~  127 (683)
                      -+|.|..|+.+..-.++...-.-.... -+... +.-+..-....+|.+...++.+|.+...-+. +++....  ++...
T Consensus       224 P~~~gGvlV~ge~~I~Y~~~~~~~ai~-p~~~~~~t~~~~~~v~~~~~~yLl~d~~G~Lf~l~l~~~~e~~s~~~lkve~  302 (1096)
T KOG1897|consen  224 PSPIGGVLVIGEEFIVYMSGDNFVAIA-PLTAEQSTIVCYGRVDLQGSRYLLGDEDGMLFKLLLSHTGETVSGLDLKVEY  302 (1096)
T ss_pred             CCCCceEEEEeeeEEEEeeCCceeEec-ccccCCceEEEcccccCCccEEEEecCCCcEEEEEeecccccccceEEEEEe
Confidence            477788888876644444431111111 11122 2222333456788888889999998777666 5544433  22221


Q ss_pred             CCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEecccccee----eeccccccCCCeeEEEEcCC-----CC
Q psy15995        128 IGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHI----LKNEFHPIGGPIKDIAWSPD-----NQ  198 (683)
Q Consensus       128 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~~~~~~i~~~~~s~~-----~~  198 (683)
                      .+          ...-..++.+-++| .|.+|+.-|.=++-.+.+....    .....-..-++|.+++.-..     ++
T Consensus       303 lg----------e~siassi~~L~ng-~lFvGS~~gdSqLi~L~~e~d~gsy~~ilet~~NLgPI~Dm~Vvd~d~q~q~q  371 (1096)
T KOG1897|consen  303 LG----------ETSIASSINYLDNG-VLFVGSRFGDSQLIKLNTEPDVGSYVVILETFVNLGPIVDMCVVDLDRQGQGQ  371 (1096)
T ss_pred             cC----------CcchhhhhhcccCc-eEEEeccCCceeeEEccccCCCCchhhhhhhcccccceeeEEEEeccccCCce
Confidence            11          11334566666666 6667777665566555442211    11111122368888877543     34


Q ss_pred             eEEEEecCCceEEEEEEccCCCcee-----eeecCCcCeEEEE--eecCCCeEEEEeeCCCeEEEEcCCCCceeeecccc
Q psy15995        199 RMVVVGEGRERFGHVFMSETGTSVG-----EISGQSKPINSCD--FKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH  271 (683)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~--~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~  271 (683)
                      .+.+++..++.  .+...+.|--+.     .+.| ...++.+.  +.++-+..++.+-.+. -++..+...-......+.
T Consensus       372 ivtCsGa~kdg--SLRiiRngi~I~e~A~i~l~G-ikg~w~lk~~v~~~~d~ylvlsf~~e-Trvl~i~~e~ee~~~~gf  447 (1096)
T KOG1897|consen  372 IVTCSGAFKDG--SLRIIRNGIGIDELASIDLPG-IKGMWSLKSMVDENYDNYLVLSFISE-TRVLNISEEVEETEDPGF  447 (1096)
T ss_pred             EEEEeCCCCCC--cEEEEecccccceeeEeecCC-ccceeEeeccccccCCcEEEEEeccc-eEEEEEccceEEeccccc
Confidence            55555555554  344444433222     2334 45566666  4444333344443332 233333222111112222


Q ss_pred             ccCeEEEEECC-CCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCce
Q psy15995        272 SRFVQAVRYSP-SGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSV  350 (683)
Q Consensus       272 ~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  350 (683)
                      ......+..|. .++.|+=.+ ...|++++-.  .......   ..+.++....+.+...++.++.++.+...++..+..
T Consensus       448 ~~~~~Tif~S~i~g~~lvQvT-s~~iRl~ss~--~~~~~W~---~p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l  521 (1096)
T KOG1897|consen  448 STDEQTIFCSTINGNQLVQVT-SNSIRLVSSA--GLRSEWR---PPGKITIGVVSANASQVVVAGGGLALFYLEIEDGGL  521 (1096)
T ss_pred             cccCceEEEEccCCceEEEEe-cccEEEEcch--hhhhccc---CCCceEEEEEeecceEEEEecCccEEEEEEeeccce
Confidence            22222232222 333333333 2457777743  2223332   233444444445556777777777777777776664


Q ss_pred             eeEEEecCcceeceEEEEec------CCEEEEEecCCcEEEEecCCCCccee-e-eee--ccccEEEEEEeCCCCEEEEE
Q psy15995        351 VSEFIMGNQVEDQQVSCLWQ------GDYLLTVSLSGFISYLDVNNPSTPIR-V-IKG--HNKPITALALSPDRGTVFTG  420 (683)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~g~i~~~~~~~~~~~~~-~-~~~--~~~~v~~~~~~~~~~~l~~~  420 (683)
                      .............++.++|-      .+.+++|..+..+.+.-.......+. . +.+  -...|.-.++-.|..+|.++
T Consensus       522 ~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlva  601 (1096)
T KOG1897|consen  522 REVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVA  601 (1096)
T ss_pred             eeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEEEEE
Confidence            33333344455666666652      23678887776655443332222111 1 111  12234445566678899999


Q ss_pred             eCCCcEEEEcCC--CCCcceec---cCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCC----CCcee
Q psy15995        421 SHDGFITRWNAK--TGENDRVQ---GAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGS----QPRGL  491 (683)
Q Consensus       421 ~~dg~i~~w~~~--~~~~~~~~---~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~----~~~~~  491 (683)
                      ..||.+.-+-+.  ++......   ..........+...+..-+.+..|.-..+|..+..-...+ .....    .+-.-
T Consensus       602 lgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~kLv~sp-ls~kev~~~c~f~s  680 (1096)
T KOG1897|consen  602 LGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNGKLVYSP-LSLKEVNHMCPFNS  680 (1096)
T ss_pred             cCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCCcEEEec-cchHHhhhhccccc
Confidence            999998766544  43322111   1111122223333344444444455444554333211111 00000    00000


Q ss_pred             eecCCeEEEEEeceEEEEe----CCceeeeecCCCCCcEEEEccCCCEEEEEcCC--------------CcEEEEEcCCC
Q psy15995        492 DIDENTLVTVTVKQISIVE----NGAKVSSLPIDYEPSSISLDHEHGLVAVGGAD--------------SKVHIYELNNK  553 (683)
Q Consensus       492 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------------g~i~i~d~~~~  553 (683)
                      ..-++.++......+.+..    ..-.++..|....+..+++.+....+++.+.-              ..++++|-.+.
T Consensus       681 ~a~~d~l~~~~~~~l~i~tid~iqkl~irtvpl~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf  760 (1096)
T KOG1897|consen  681 DAYPDSLASANGGALTIGTIDEIQKLHIRTVPLGESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTF  760 (1096)
T ss_pred             ccCCceEEEecCCceEEEEecchhhcceeeecCCCChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCce
Confidence            1112233333333333322    11223457777888888888866555554431              12667776666


Q ss_pred             ccCcceeecCCcC---eeEEEECCC-CCEEEEEe----------CCCeEEEEECCC-CccccccceeeecccEEEEEecC
Q psy15995        554 SLSPKAELDHLGP---VTDCSFSPS-NEYLVASD----------AHRKVVLYRVPD-FELAHNKEWGFHSAKVNCVAWSP  618 (683)
Q Consensus       554 ~~~~~~~~~~~~~---v~~~~~s~~-~~~l~~~~----------~d~~i~i~~~~~-~~~~~~~~~~~h~~~v~~~~~s~  618 (683)
                      +............   +.++.|..| +.++++|.          ..|.|.+|.+.. +++....+.. -.+.+.++..- 
T Consensus       761 ~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~-v~Gav~aL~~f-  838 (1096)
T KOG1897|consen  761 EVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETV-VKGAVYALVEF-  838 (1096)
T ss_pred             eEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeee-eccceeehhhh-
Confidence            5554444443333   444558887 77888775          358899999887 4443333322 34555555432 


Q ss_pred             CCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEee
Q psy15995        619 DSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       619 d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~  680 (683)
                      +|++||.-  +..|++|+..+.+.+..-..  +..++..+... .++.++.|.--+++.+-..
T Consensus       839 ngkllA~I--n~~vrLye~t~~~eLr~e~~--~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y  897 (1096)
T KOG1897|consen  839 NGKLLAGI--NQSVRLYEWTTERELRIECN--ISNPIIALDLQVKGDEIAVGDLMRSITLLQY  897 (1096)
T ss_pred             CCeEEEec--CcEEEEEEccccceehhhhc--ccCCeEEEEEEecCcEEEEeeccceEEEEEE
Confidence            67777654  56899999988755544433  56778888877 7788888887777665443

>KOG0280|consensus

Probab=99.14  E-value=1.3e-08  Score=86.54  Aligned_cols=274  Identities=15%  Similarity=0.117  Sum_probs=174.4

Q ss_pred             CCeEEEEeCCCCcccc--c-ccCcccceEEEEECC---CCc-EEEEecCCCCEEEEeCCCcccccccccccCCCCcccce
Q psy15995         64 GNSVIIRNIENPAISD--I-YTEHSCAVNVAKYSP---SGF-YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIG  136 (683)
Q Consensus        64 ~~~i~v~~~~~~~~~~--~-~~~h~~~v~~~~~s~---d~~-~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  136 (683)
                      .|.+.+|++++.+...  + ....+..+..+.|.-   +|. .|+-+..+|.|.++.....+....+..-...    .+.
T Consensus        45 ~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~----ki~  120 (339)
T KOG0280|consen   45 SGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSK----KIS  120 (339)
T ss_pred             ccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchh----hhh
Confidence            3578888888766544  1 112345567777764   555 5566778899999987665444333322100    000


Q ss_pred             eeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEc
Q psy15995        137 TLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMS  216 (683)
Q Consensus       137 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~  216 (683)
                      .    ....++.|++.+..++++..+|.+.+-+............+.|+-......|+.....++..+++.. .+..|+.
T Consensus       121 ~----~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~-~l~~~D~  195 (339)
T KOG0280|consen  121 V----VEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDG-SLSCWDI  195 (339)
T ss_pred             h----eeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCc-eEEEEEe
Confidence            0    1245778899999999999999999766665554444567788888999999876655555444432 3566666


Q ss_pred             c-CCCceee-eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCC--EEEEEcC
Q psy15995        217 E-TGTSVGE-ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGS--HFASAGF  292 (683)
Q Consensus       217 ~-~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~  292 (683)
                      . .++.+.. .+-|...|.++.-+|..+..+++|+.|-.|++||.+.......-..-.+.|+.+.++|.-.  .|+++-.
T Consensus       196 R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh  275 (339)
T KOG0280|consen  196 RIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMH  275 (339)
T ss_pred             cCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHHHh
Confidence            6 3444444 6779999999999998887899999999999999885443333333458899999999643  3444444


Q ss_pred             CCcEEEEeCCCCeeE---EeccCCccccCeEEEEEccCCCEEEEEEC-CCcEE-EEECCC
Q psy15995        293 DGKVFLYDGASADLV---SELGNPAHKGGVYAVAWKPDGTQLLTASG-DKTCK-LWDIET  347 (683)
Q Consensus       293 dg~i~iw~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~-iwd~~~  347 (683)
                      +| .++-+.+.+...   .......|.+-...-.|......|++|+. |+.++ +|-.-+
T Consensus       276 ~G-~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t  334 (339)
T KOG0280|consen  276 NG-AKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHIT  334 (339)
T ss_pred             cC-ceEEEecccccchheeeeccccccceeeccccccccceeeeeeccccceeeeeeecc
Confidence            44 566665544322   11111236666666666544456777653 55534 664433

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.13  E-value=5.6e-09  Score=101.19  Aligned_cols=180  Identities=12%  Similarity=0.024  Sum_probs=110.1

Q ss_pred             eccCCCCCCc-eeecCCCCCCceeeecccce-eecCCCcccCCCeEEEeeCCCCCeEEEec----CCeEEEEeCCCCccc
Q psy15995          5 TLPRTQRGQP-IVLGGDPKGKNFLYTNGNKY-IFATLPRTQRGQPIVLGGDPKGKNFLYTN----GNSVIIRNIENPAIS   78 (683)
Q Consensus         5 ~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~~~----~~~i~v~~~~~~~~~   78 (683)
                      ...|+|+|+. +.......+..-++...... ....+.. .++.....+|||||+.|++..    +..|.++|+.+++..
T Consensus       192 ~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~  270 (419)
T PRK04043        192 FPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLT  270 (419)
T ss_pred             eEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEE
Confidence            4568999986 55433322223333322111 1111111 344556678999999998863    358999999888754


Q ss_pred             ccccCcccceEEEEECCCCcEEEEecC-CC--CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE
Q psy15995         79 DIYTEHSCAVNVAKYSPSGFYIASGDI-SG--KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY  155 (683)
Q Consensus        79 ~~~~~h~~~v~~~~~s~d~~~las~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  155 (683)
                      . +..+........|+|||+.|+..+. .+  .|.+.|+.+++... +....              .  ....|+|||++
T Consensus       271 ~-LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~r-lt~~g--------------~--~~~~~SPDG~~  332 (419)
T PRK04043        271 Q-ITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQ-VVFHG--------------K--NNSSVSTYKNY  332 (419)
T ss_pred             E-cccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEe-CccCC--------------C--cCceECCCCCE
Confidence            3 5544444456689999998876653 33  58888887765422 11111              1  12479999998


Q ss_pred             EEeecCC---------ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCC
Q psy15995        156 IASGDIS---------GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR  207 (683)
Q Consensus       156 l~~~~~d---------~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~  207 (683)
                      |+.....         ..|.+.|+.+++.... ...   +......|+|||+.++......
T Consensus       333 Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~L-T~~---~~~~~p~~SPDG~~I~f~~~~~  389 (419)
T PRK04043        333 IVYSSRETNNEFGKNTFNLYLISTNSDYIRRL-TAN---GVNQFPRFSSDGGSIMFIKYLG  389 (419)
T ss_pred             EEEEEcCCCcccCCCCcEEEEEECCCCCeEEC-CCC---CCcCCeEECCCCCEEEEEEccC
Confidence            8876543         3688889888764322 111   2344689999999998887553

>KOG4714|consensus

Probab=99.13  E-value=6.3e-09  Score=86.73  Aligned_cols=233  Identities=17%  Similarity=0.149  Sum_probs=132.2

Q ss_pred             EEeCCCCcccccccCccc-ceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeee
Q psy15995         69 IRNIENPAISDIYTEHSC-AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNI  147 (683)
Q Consensus        69 v~~~~~~~~~~~~~~h~~-~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  147 (683)
                      .|-..+. .+....+|.+ .|+.+.++.+- .|+++..++.+......++.+....+......+....+  .+..+-.+-
T Consensus        20 ~~~~~t~-~vD~i~~~~d~~~~~~~~v~~~-~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a--~~sep~p~~   95 (319)
T KOG4714|consen   20 EVGSSTP-LVDEIMQHADVKLSKVSLSAEY-ILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLA--KNSEIDPND   95 (319)
T ss_pred             eeeccCc-chhhcccccceEEEEeechhhh-eeecccchhheeeeccceEEEechhhcccCcCceeeee--ccCCCCCcc
Confidence            3333343 3333344433 26666666554 56677777777776665554433332222112221111  111222222


Q ss_pred             EeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeec
Q psy15995        148 LVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISG  227 (683)
Q Consensus       148 ~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (683)
                      +.+--+..++++..||.+.+.+.+.-..+ ..+.......-.+.+....++.+.+.+                       
T Consensus        96 ~~s~~~t~V~~~~~dg~~~v~s~~~~~~~-~~~i~~~~~~~as~~~~~~~~~i~s~~-----------------------  151 (319)
T KOG4714|consen   96 ACTMTDNRVCIGYADGSLAVFSTDKDLAL-MSRIPSIHSGSASRKICRHGNSILSGG-----------------------  151 (319)
T ss_pred             cccccCCceEecCCCceEEEEechHHHhh-hhhcccccccccccceeecccEEecCC-----------------------
Confidence            33445678999999999999998762111 111111000001111111111111100                       


Q ss_pred             CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCC-EEEEEcCCCcEEEEeCCCCee
Q psy15995        228 QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGS-HFASAGFDGKVFLYDGASADL  306 (683)
Q Consensus       228 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~  306 (683)
                                       +..-..-+..+.|+++..+...........|.+++-+|..+ .+++|+.||.+-+||.++...
T Consensus       152 -----------------~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~  214 (319)
T KOG4714|consen  152 -----------------CGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAM  214 (319)
T ss_pred             -----------------cceEeeccceeeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccc
Confidence                             11222234566777766655444443445599999999655 677888999999999998855


Q ss_pred             EEeccCCccccCeEEEEEcc-CCCEEEEEECCCcEEEEECCC
Q psy15995        307 VSELGNPAHKGGVYAVAWKP-DGTQLLTASGDKTCKLWDIET  347 (683)
Q Consensus       307 ~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~  347 (683)
                      ...+- .+|+.++..+-|+| ++..|+++++||.+..||..+
T Consensus       215 p~S~l-~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  215 PVSLL-KAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             hHHHH-HHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence            44433 35999999999999 678999999999999999875

>KOG4532|consensus

Probab=99.10  E-value=6.5e-08  Score=81.24  Aligned_cols=231  Identities=13%  Similarity=0.080  Sum_probs=153.0

Q ss_pred             CCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEE---EEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCc
Q psy15995        413 DRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGM---KATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPR  489 (683)
Q Consensus       413 ~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~---~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~  489 (683)
                      ...+|+.|+..|...+|...+.+....+...+...|.-.   +-..-.+..++.|.+++++++.......          
T Consensus        83 kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~----------  152 (344)
T KOG4532|consen   83 KCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKF----------  152 (344)
T ss_pred             cccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccc----------
Confidence            346889999999999999987765544433444433322   2224566777888888888776542110          


Q ss_pred             eeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcce--eecCCcCe
Q psy15995        490 GLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKA--ELDHLGPV  567 (683)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~~v  567 (683)
                                               ..-.+ .-...++++++|++++++.+....|..|.++........  ..+..+.-
T Consensus       153 -------------------------~~h~~-~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~g  206 (344)
T KOG4532|consen  153 -------------------------AVHNQ-NLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHG  206 (344)
T ss_pred             -------------------------eeecc-ccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCc
Confidence                                     00011 012578899999999999999999999999765433222  22234445


Q ss_pred             eEEEECCCCCEEEEEeCCCeEEEEECCCCcccc----ccceeeecccEEEEEecCCCC--eEEEeecCCcEEEEeCCCCc
Q psy15995        568 TDCSFSPSNEYLVASDAHRKVVLYRVPDFELAH----NKEWGFHSAKVNCVAWSPDSA--LVASGSLDTTIIIWSLASPA  641 (683)
Q Consensus       568 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~----~~~~~~h~~~v~~~~~s~d~~--~l~~~~~d~~v~iw~~~~~~  641 (683)
                      -+..|+.....+|++..||++.|||+.......    ..+.. |.+.+..+.|++-|.  +|+..-.-+.+.+-|+++..
T Consensus       207 F~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~-hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~  285 (344)
T KOG4532|consen  207 FYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPH-HNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYV  285 (344)
T ss_pred             eeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCC-CCCceEEEEecCCCcceEEEEecCcceEEEEEcccCc
Confidence            677899999999999999999999998643322    12222 899999999998653  45555556789999999987


Q ss_pred             eeeEeec------CCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEeec
Q psy15995        642 KHIIIKN------AHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       642 ~~~~~~~------~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~~  681 (683)
                      ....+..      .|....|..-.|. ++....+..++ .+.-|++.
T Consensus       286 ~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~-~~ae~ni~  331 (344)
T KOG4532|consen  286 NHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNEL-QGAEYNIL  331 (344)
T ss_pred             eeeEEecCccccccccccccccccccCCCcccccccch-hhheeecc
Confidence            6655421      2222348888888 44444444443 24455553

>KOG4649|consensus

Probab=99.09  E-value=3e-06  Score=71.35  Aligned_cols=145  Identities=15%  Similarity=0.154  Sum_probs=98.8

Q ss_pred             CCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceec
Q psy15995        284 GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQ  363 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  363 (683)
                      ..+++.|+..+.+...|..+|+...+..   -...|.+-+.- -|++++.|+..|.+++.+..++.....+....... .
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~i---lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk-~   97 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAI---LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVK-V   97 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehh---hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhc-c
Confidence            3478889999999999999999887754   33344443333 36789999999999999999998888776554433 3


Q ss_pred             eEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC
Q psy15995        364 QVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG  434 (683)
Q Consensus       364 ~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~  434 (683)
                      ...+.+++..+.+++.|++.+..|.+......+ .+...+...+-+..|-...|+.+...|.+.--...+.
T Consensus        98 ~a~~d~~~glIycgshd~~~yalD~~~~~cVyk-skcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~  167 (354)
T KOG4649|consen   98 RAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYK-SKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPY  167 (354)
T ss_pred             ceEEcCCCceEEEecCCCcEEEecccccceEEe-cccCCceeccceecCCCceEEEEeccceEEEEccCCC
Confidence            345677999999999999999999987443332 2222233334455563344555555565554444443

>KOG4649|consensus

Probab=99.09  E-value=1e-06  Score=74.03  Aligned_cols=150  Identities=13%  Similarity=0.022  Sum_probs=101.0

Q ss_pred             Eeecc-ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeee
Q psy15995        148 LVLSI-GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS  226 (683)
Q Consensus       148 ~~s~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (683)
                      .+.+| ..+++.|+..+.+.--|..+|+..++..+.   .++.+-+.- -|++++.++....  .++...++|.....+.
T Consensus        17 VV~~dskT~v~igSHs~~~~avd~~sG~~~We~ilg---~RiE~sa~v-vgdfVV~GCy~g~--lYfl~~~tGs~~w~f~   90 (354)
T KOG4649|consen   17 VVCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAILG---VRIECSAIV-VGDFVVLGCYSGG--LYFLCVKTGSQIWNFV   90 (354)
T ss_pred             EEecCCceEEEEecCCceEEEecCCCCcEEeehhhC---ceeeeeeEE-ECCEEEEEEccCc--EEEEEecchhheeeee
Confidence            34444 457888999999999999999887766554   455443333 4556777666543  5677778887777665


Q ss_pred             cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC
Q psy15995        227 GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA  304 (683)
Q Consensus       227 ~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  304 (683)
                      .-..--......+++. ++..++.|++.+..|..+...+...+-......+-++.|-...|..+...|.+.--..++.
T Consensus        91 ~~~~vk~~a~~d~~~g-lIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~  167 (354)
T KOG4649|consen   91 ILETVKVRAQCDFDGG-LIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPY  167 (354)
T ss_pred             ehhhhccceEEcCCCc-eEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCCC
Confidence            5443333445566776 5999999999999999999888887655555555666773334555555666665555444

>KOG3617|consensus

Probab=99.07  E-value=1.5e-08  Score=98.80  Aligned_cols=333  Identities=12%  Similarity=0.045  Sum_probs=175.0

Q ss_pred             CCeEEEeeCCCCCeEEEe-----cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccc
Q psy15995         45 GQPIVLGGDPKGKNFLYT-----NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH  119 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~-----~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~  119 (683)
                      +..+-.+|+|...++|.+     .+|+|.||- ++|++.+..+ -.-.+++++|.|..-.||.|-.-|.+.+|..++.+.
T Consensus        16 avsti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~   93 (1416)
T KOG3617|consen   16 AVSTISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTET   93 (1416)
T ss_pred             ccccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCcee
Confidence            344556789999998876     378998885 5565544322 122356799999998999999999999999988876


Q ss_pred             ccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeecccccc--CCCe--eEEEEcC
Q psy15995        120 ILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPI--GGPI--KDIAWSP  195 (683)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~i--~~~~~s~  195 (683)
                      ......|+              .++..+.||++|..|+++..-|.+.+|...--..+....+-.|  ...+  .+...++
T Consensus        94 htv~~th~--------------a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~  159 (1416)
T KOG3617|consen   94 HTVVETHP--------------APIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSY  159 (1416)
T ss_pred             eeeccCCC--------------CCceeEEecCCCCeEEEcCCCceeEEEEeeeccccccchhhhhHhhceeeEEEEecCC
Confidence            65555555              7899999999999999999999999998864322222222111  1223  3334455


Q ss_pred             CCCeE-----EEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc
Q psy15995        196 DNQRM-----VVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE  270 (683)
Q Consensus       196 ~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~  270 (683)
                      ++.-+     +++.++...+-..++|+.....+... |       .=.|+|. .++.++.+|+|+-.|- .++.....+.
T Consensus       160 ~~Ee~~~laKaaVtgDe~alD~~fnwk~~~a~rs~~-k-------sgv~~g~-~F~~~~~~GtVyyvdq-~g~~~~V~k~  229 (1416)
T KOG3617|consen  160 DREEKFKLAKAAVTGDESALDEPFNWKESLAERSDE-K-------SGVPKGT-EFLFAGKSGTVYYVDQ-NGRQRTVHKL  229 (1416)
T ss_pred             ChHHhhhhhhhhccCchhhhcccccCccchhhcccc-c-------cCCCCCc-EEEEEcCCceEEEEcC-CCcEEEEEEc
Confidence            53211     11122222212233333211111100 0       0123443 3566666666666552 2222222211


Q ss_pred             cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc-----CCCEEEEEECCCcEEEEEC
Q psy15995        271 HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP-----DGTQLLTASGDKTCKLWDI  345 (683)
Q Consensus       271 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~l~~~~~dg~i~iwd~  345 (683)
                      . .. ..+-|.+....+.+...+-++.++-....-         ....+..+..+-     +|. ++++-..|.++    
T Consensus       230 d-S~-vQmLf~~~~eai~~i~e~lr~~l~~v~~~G---------~~ee~~~vk~sgk~GgrqGg-iA~sEssGvLr----  293 (1416)
T KOG3617|consen  230 D-SE-VQMLFMGYCEAISIIIEFLRDCLIFVLAKG---------TSEERCAVKVSGKLGGRQGG-IACSESSGVLR----  293 (1416)
T ss_pred             c-ch-HHHHHhcccceEEEEeeeceeeEEEecCCC---------chHHhhhhhhccccCCccCc-ccccccccccc----
Confidence            1 11 123334433333333333233222221111         111111111111     111 22222222111    


Q ss_pred             CCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCC---cc---e---eeeeeccccEEEEEEeCCCCE
Q psy15995        346 ETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS---TP---I---RVIKGHNKPITALALSPDRGT  416 (683)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~---~~---~---~~~~~~~~~v~~~~~~~~~~~  416 (683)
                          ....+.........+++....+..+..|...|.+.+|.-....   .+   .   .......+.|+.+.|.|-.+.
T Consensus       294 ----~~eKyg~e~ge~~~c~cY~~~~~~l~agt~~gnv~~w~~v~~~f~g~p~~d~w~l~~~~e~~g~I~~i~Wg~~k~~  369 (1416)
T KOG3617|consen  294 ----KSEKYGLELGEGILCMCYGEKEIRLWAGTKEGNVTIWLDVNKGFQGDPTIDVWTLNGKRESLGKISLIRWGPIKST  369 (1416)
T ss_pred             ----CCcchhhhcCCceEEEEEeccceEEEecccCCcEEEeeecCccccCCCCcceEEecCchhhccceEEEEeccccch
Confidence                1112222334455667777788899999999999999654321   11   1   112234567999999997666


Q ss_pred             EEEEeCC
Q psy15995        417 VFTGSHD  423 (683)
Q Consensus       417 l~~~~~d  423 (683)
                      ++.-+..
T Consensus       370 ~avn~~~  376 (1416)
T KOG3617|consen  370 AAVNTEE  376 (1416)
T ss_pred             hhhhhhh
Confidence            6655443

>KOG4714|consensus

Probab=99.05  E-value=9e-09  Score=85.86  Aligned_cols=198  Identities=15%  Similarity=0.145  Sum_probs=121.0

Q ss_pred             eEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEE----------ccCCCEEEEEECCCcEEEEE
Q psy15995        275 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW----------KPDGTQLLTASGDKTCKLWD  344 (683)
Q Consensus       275 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~----------~~~~~~l~~~~~dg~i~iwd  344 (683)
                      ++.+.++.+- .|+++..++.+.......+.+..........++..+++.          +--+..++++..||.+.+++
T Consensus        39 ~~~~~~v~~~-~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s  117 (319)
T KOG4714|consen   39 LSKVSLSAEY-ILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFS  117 (319)
T ss_pred             EEEeechhhh-eeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceEecCCCceEEEEe
Confidence            4555555443 466666666666554443333322221112222223322          22356789999999999999


Q ss_pred             CCCCceeeEEEecCcceeceEEEEecCCEEEEEe-----cCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC-CEEE
Q psy15995        345 IETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVS-----LSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR-GTVF  418 (683)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~  418 (683)
                      .+.-..+...................++.+.++.     .-+..+.|+++.........+. ...|++++-+|.. ..++
T Consensus       118 ~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~-~~~v~~l~~hp~qq~~v~  196 (319)
T KOG4714|consen  118 TDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKA-LDAVTALCSHPAQQHLVC  196 (319)
T ss_pred             chHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccccc-cccchhhhCCcccccEEE
Confidence            8763222211111111222223333444444332     2345666776654433332222 2349999999954 5666


Q ss_pred             EEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe---CCeEEEEEcCCeEEEEeCCC
Q psy15995        419 TGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT---GELLYTCGIDDTIKQVDLSS  474 (683)
Q Consensus       419 ~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~~~~~~  474 (683)
                      +|+.||.+.+||.+...........|..++..+.|.   ++.|++++.||.+-.||..+
T Consensus       197 cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  197 CGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             EecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence            888999999999999877777778899999999998   78999999999999999775

>KOG0309|consensus

Probab=99.02  E-value=3.4e-09  Score=101.58  Aligned_cols=287  Identities=15%  Similarity=0.191  Sum_probs=189.0

Q ss_pred             ccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC-eeEEeccCCccccCeEEEEEccCC--CEEEEEECCCcEEEEECCCC
Q psy15995        272 SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA-DLVSELGNPAHKGGVYAVAWKPDG--TQLLTASGDKTCKLWDIETK  348 (683)
Q Consensus       272 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~  348 (683)
                      .+++.++.++|.|+-++.++.-| +.+.|+... ....-+. ....-.+....|+|..  .+-++......-.+|++...
T Consensus        24 ~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~-h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~s  101 (1081)
T KOG0309|consen   24 DGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLH-HITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKS  101 (1081)
T ss_pred             cCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeee-ccCcchhcceecccCCCCceeEEecCcchhhhhhhhcC
Confidence            45678899999999999999776 555565543 2222221 0133456777887743  33444444556678887643


Q ss_pred             --ceeeEEEecCcceeceEEEEe-cCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCc
Q psy15995        349 --SVVSEFIMGNQVEDQQVSCLW-QGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGF  425 (683)
Q Consensus       349 --~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  425 (683)
                        +.+.-+..++......+.+.+ ....+++.+.+-.+..||++.+..++.........-..+.|+-....+.+.+....
T Consensus       102 s~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~  181 (1081)
T KOG0309|consen  102 SSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGND  181 (1081)
T ss_pred             CccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCc
Confidence              333344455555566666666 45678899999999999999999999888877778888999886666666677888


Q ss_pred             EEEEcCCCCCcceeccCCCCcceeEEEEe---CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEE
Q psy15995        426 ITRWNAKTGENDRVQGAGHGNQINGMKAT---GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVT  502 (683)
Q Consensus       426 i~~w~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (683)
                      |++||++.+........+|...+..+.+.   ...+.+++.|++++.|+........                       
T Consensus       182 i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~-----------------------  238 (1081)
T KOG0309|consen  182 IFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTES-----------------------  238 (1081)
T ss_pred             eEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccccccc-----------------------
Confidence            99999999887777777788889888887   6788999999999999988653221                       


Q ss_pred             eceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEE--cCCCcEEE---------EEcCCCccCcceeecCCcCeeEEE
Q psy15995        503 VKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVG--GADSKVHI---------YELNNKSLSPKAELDHLGPVTDCS  571 (683)
Q Consensus       503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~dg~i~i---------~d~~~~~~~~~~~~~~~~~v~~~~  571 (683)
                                  ....+...++..-.+-|-|.-.++-  -.+..+.+         |+..++........+|.+.|....
T Consensus       239 ------------~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFl  306 (1081)
T KOG0309|consen  239 ------------KRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFL  306 (1081)
T ss_pred             ------------ceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHh
Confidence                        1122233334444444433222111  11123333         333333322334456777776655


Q ss_pred             ECCC----------CCEEEEEeCCCeEEEEECCC
Q psy15995        572 FSPS----------NEYLVASDAHRKVVLYRVPD  595 (683)
Q Consensus       572 ~s~~----------~~~l~~~~~d~~i~i~~~~~  595 (683)
                      |-..          .-.|++-+.|.++++|-+.+
T Consensus       307 WR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  307 WRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             hhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence            5322          23789999999999998864

>KOG0882|consensus

Probab=99.02  E-value=1.9e-08  Score=90.76  Aligned_cols=257  Identities=15%  Similarity=0.143  Sum_probs=177.3

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEEeCCCc---ccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNK---EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD  160 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  160 (683)
                      |.+.|+.+..+. .+++.+++.||.++.|.-..-   +.+..+..              +...+..++.+-+|..+.+.+
T Consensus         8 hrd~i~hv~~tk-a~fiiqASlDGh~KFWkKs~isGvEfVKhFra--------------HL~~I~sl~~S~dg~L~~Sv~   72 (558)
T KOG0882|consen    8 HRDVITHVFPTK-AKFIIQASLDGHKKFWKKSRISGVEFVKHFRA--------------HLGVILSLAVSYDGWLFRSVE   72 (558)
T ss_pred             ccceeeeEeeeh-hheEEeeecchhhhhcCCCCccceeehhhhHH--------------HHHHHHhhhccccceeEeecc
Confidence            788888876544 469999999999999975441   12222222              236788889999999999977


Q ss_pred             C-CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCC--CceeeeecCCcCeEEEEe
Q psy15995        161 I-SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG--TSVGEISGQSKPINSCDF  237 (683)
Q Consensus       161 ~-d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~  237 (683)
                      . |..++++|+++-..+....+...++.+..+--..|...+++++......+.+++-...  +....-.-|..+|..+.+
T Consensus        73 d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y  152 (558)
T KOG0882|consen   73 DPDHSVKVFDVENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRY  152 (558)
T ss_pred             CcccceeEEEeeccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEe
Confidence            7 9999999998865443444443334433332222333445555545545566665433  233334569999999999


Q ss_pred             ecCCCeEEEEeeCCCeEEEEcCCC-Cce-----eee---------ccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCC
Q psy15995        238 KPSRPFRIITGSEDNTIAVFEGPP-FKF-----KMT---------KQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGA  302 (683)
Q Consensus       238 ~~~~~~~l~~~~~d~~i~iw~~~~-~~~-----~~~---------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  302 (683)
                      .+.+.. +++....|.|.-|..+. .+.     ...         +........++.|+|++..+.+-+.|..|++++.+
T Consensus       153 ~qa~Ds-~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~K  231 (558)
T KOG0882|consen  153 NQAGDS-AVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFK  231 (558)
T ss_pred             eccccc-eeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEec
Confidence            999985 89999999999998762 111     111         12234567899999999999999999999999999


Q ss_pred             CCeeEEeccCCc------------------------------c-ccCeEEEEEccCCCEEEEEECCCcEEEEECCCCcee
Q psy15995        303 SADLVSELGNPA------------------------------H-KGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVV  351 (683)
Q Consensus       303 ~~~~~~~~~~~~------------------------------~-~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  351 (683)
                      +++.++.+....                              | ...-..+.|...+++|+.++-=| |++.++.++..+
T Consensus       232 tGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~  310 (558)
T KOG0882|consen  232 TGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVV  310 (558)
T ss_pred             cchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEE
Confidence            987766543210                              1 11234567888889999888765 899999999888


Q ss_pred             eEEEec
Q psy15995        352 SEFIMG  357 (683)
Q Consensus       352 ~~~~~~  357 (683)
                      +.+-..
T Consensus       311 ri~gk~  316 (558)
T KOG0882|consen  311 RILGKD  316 (558)
T ss_pred             EEeccc
Confidence            776433

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=99.02  E-value=1.1e-06  Score=78.06  Aligned_cols=247  Identities=16%  Similarity=0.157  Sum_probs=165.3

Q ss_pred             CCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeE--EEEeecCCCeEEEEe-----eCCCeEEEEc
Q psy15995        186 GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPIN--SCDFKPSRPFRIITG-----SEDNTIAVFE  258 (683)
Q Consensus       186 ~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~l~~~-----~~d~~i~iw~  258 (683)
                      .....++.+|+....++.......+..+++..+++....+....+.-.  .-.|+++|++ |++.     ...|.|-|||
T Consensus         5 ~RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~-LytTEnd~~~g~G~IgVyd   83 (305)
T PF07433_consen    5 ARGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRL-LYTTENDYETGRGVIGVYD   83 (305)
T ss_pred             ccccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCE-EEEeccccCCCcEEEEEEE
Confidence            556778999977777777777777889999999998877765554433  4689999996 5543     3368999999


Q ss_pred             CC-CCceeeeccccccCeEEEEECCCCCEEEEEcC------------------CCcEEEEeCCCCeeEEeccC--Ccccc
Q psy15995        259 GP-PFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF------------------DGKVFLYDGASADLVSELGN--PAHKG  317 (683)
Q Consensus       259 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------dg~i~iw~~~~~~~~~~~~~--~~~~~  317 (683)
                      .. ..+.+.++..|.-....+.+.|||+.|+++..                  +.++...|..+|+.+.....  ..|..
T Consensus        84 ~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~l  163 (305)
T PF07433_consen   84 AARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQL  163 (305)
T ss_pred             CcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcccccc
Confidence            88 77788888888878888999999988887642                  23566677888988887555  33778


Q ss_pred             CeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceee
Q psy15995        318 GVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRV  397 (683)
Q Consensus       318 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~  397 (683)
                      .|..+++.++|..++..-..|.-       ...                    ...++.-..++.+..++...     ..
T Consensus       164 SiRHLa~~~~G~V~~a~Q~qg~~-------~~~--------------------~PLva~~~~g~~~~~~~~p~-----~~  211 (305)
T PF07433_consen  164 SIRHLAVDGDGTVAFAMQYQGDP-------GDA--------------------PPLVALHRRGGALRLLPAPE-----EQ  211 (305)
T ss_pred             ceeeEEecCCCcEEEEEecCCCC-------Ccc--------------------CCeEEEEcCCCcceeccCCh-----HH
Confidence            89999999998766655443320       000                    00111111112222222221     11


Q ss_pred             eeeccccEEEEEEeCCCCEEE-EEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEE
Q psy15995        398 IKGHNKPITALALSPDRGTVF-TGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIK  468 (683)
Q Consensus       398 ~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~  468 (683)
                      ...-...+-++++++++..++ |+-..+.+.+||..+++.+...   .-..+..+....+-++..+-.|.+.
T Consensus       212 ~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~---~l~D~cGva~~~~~f~~ssG~G~~~  280 (305)
T PF07433_consen  212 WRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSV---PLPDACGVAPTDDGFLVSSGQGQLI  280 (305)
T ss_pred             HHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecc---ccCceeeeeecCCceEEeCCCccEE
Confidence            223456789999999998776 4556778999999999887665   3445666666633344443344433

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.99  E-value=9.7e-07  Score=80.25  Aligned_cols=224  Identities=15%  Similarity=0.161  Sum_probs=147.5

Q ss_pred             EEEECC-CCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEee-ccceEEEeecCCccEEE
Q psy15995         90 VAKYSP-SGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVL-SIGFYIASGDISGKVRI  167 (683)
Q Consensus        90 ~~~~s~-d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~~d~~i~i  167 (683)
                      +++|.+ ++.++++--..+.|..|+..+++... +..                .....+++. +++.++++..  +.+.+
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~----------------~~~~G~~~~~~~g~l~v~~~--~~~~~   64 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDL----------------PGPNGMAFDRPDGRLYVADS--GGIAV   64 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EES----------------SSEEEEEEECTTSEEEEEET--TCEEE
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-Eec----------------CCCceEEEEccCCEEEEEEc--CceEE
Confidence            567888 77777777778899999998875432 111                225667777 6766665543  44555


Q ss_pred             Eeccccceeeecccc--c-cCCCeeEEEEcCCCCeEEEEecCCc--eE--EEEEEccCCCceeeeecCCcCeEEEEeecC
Q psy15995        168 WDTVNKEHILKNEFH--P-IGGPIKDIAWSPDNQRMVVVGEGRE--RF--GHVFMSETGTSVGEISGQSKPINSCDFKPS  240 (683)
Q Consensus       168 wd~~~~~~~~~~~~~--~-~~~~i~~~~~s~~~~~l~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  240 (683)
                      +|..+++........  . .....+.+++.|+|+..++......  ..  ..++.++....+..+...-...+.++|+|+
T Consensus        65 ~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~pNGi~~s~d  144 (246)
T PF08450_consen   65 VDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPDGKVTVVADGLGFPNGIAFSPD  144 (246)
T ss_dssp             EETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETTSEEEEEEEEESSEEEEEEETT
T ss_pred             EecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCCCeEEEEecCcccccceEECCc
Confidence            698887654433332  1 3467889999999995555443221  11  345555554444555555667889999999


Q ss_pred             CCeEEEEeeCCCeEEEEcCCCCce-------eeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC
Q psy15995        241 RPFRIITGSEDNTIAVFEGPPFKF-------KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP  313 (683)
Q Consensus       241 ~~~~l~~~~~d~~i~iw~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~  313 (683)
                      ++.++++-+..+.|..++......       ...+....+..-.+++..+|+..++....+.|.+++.+ |+.+..+..+
T Consensus       145 g~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p  223 (246)
T PF08450_consen  145 GKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELP  223 (246)
T ss_dssp             SSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-S
T ss_pred             chheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCC
Confidence            997667888889999998753221       11222222347889999999977777778999999976 8888888764


Q ss_pred             ccccCeEEEEEc-cCCCEEEEEE
Q psy15995        314 AHKGGVYAVAWK-PDGTQLLTAS  335 (683)
Q Consensus       314 ~~~~~i~~~~~~-~~~~~l~~~~  335 (683)
                        ...+++++|. ++.+.|+..+
T Consensus       224 --~~~~t~~~fgg~~~~~L~vTt  244 (246)
T PF08450_consen  224 --VPRPTNCAFGGPDGKTLYVTT  244 (246)
T ss_dssp             --SSSEEEEEEESTTSSEEEEEE
T ss_pred             --CCCEEEEEEECCCCCEEEEEe
Confidence              3489999994 6666665544

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.94  E-value=2.5e-06  Score=77.59  Aligned_cols=222  Identities=14%  Similarity=0.120  Sum_probs=138.1

Q ss_pred             EEeeCC-CCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEEC-CCCcEEEEecCCCCEEEEeCCCccccccccc
Q psy15995         49 VLGGDP-KGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYS-PSGFYIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        49 ~~~~s~-~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s-~d~~~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      .+.|.+ ++.++++- .++.|+.|+..+++... +....  ...+++. ++++++++. .+ .+.++|..+++.......
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~l~v~~-~~-~~~~~d~~~g~~~~~~~~   78 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGRLYVAD-SG-GIAVVDPDTGKVTVLADL   78 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSEEEEEE-TT-CEEEEETTTTEEEEEEEE
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCEEEEEE-cC-ceEEEecCCCcEEEEeec
Confidence            456787 55555544 47899999998887643 22222  5666777 777666554 44 466669888754333332


Q ss_pred             ccCCCCcccceeeeeecceeeeEeeccceEEEeecCC--------ccEEEEeccccceeeeccccccCCCeeEEEEcCCC
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS--------GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDN  197 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~  197 (683)
                      ....         ......+.+++.++|++.++....        |.|..++.. ++.....   ..-...+.++|+||+
T Consensus        79 ~~~~---------~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~---~~~~~pNGi~~s~dg  145 (246)
T PF08450_consen   79 PDGG---------VPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVA---DGLGFPNGIAFSPDG  145 (246)
T ss_dssp             ETTC---------SCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEE---EEESSEEEEEEETTS
T ss_pred             cCCC---------cccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEe---cCcccccceEECCcc
Confidence            1100         012668899999999977765433        557777776 3322211   112557899999999


Q ss_pred             CeEEEEecCCceEEEEEEccC-CC------ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc
Q psy15995        198 QRMVVVGEGRERFGHVFMSET-GT------SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE  270 (683)
Q Consensus       198 ~~l~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~  270 (683)
                      +.|+++...... +..++.+. +.      ....+....+..-.+++..+|+. .++....+.|.+++.+ ++.+..+..
T Consensus       146 ~~lyv~ds~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l-~va~~~~~~I~~~~p~-G~~~~~i~~  222 (246)
T PF08450_consen  146 KTLYVADSFNGR-IWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNL-WVADWGGGRIVVFDPD-GKLLREIEL  222 (246)
T ss_dssp             SEEEEEETTTTE-EEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-E-EEEEETTTEEEEEETT-SCEEEEEE-
T ss_pred             hheeecccccce-eEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCE-EEEEcCCCEEEEECCC-ccEEEEEcC
Confidence            999887766655 44444442 22      11122222334788999999984 6666678999999976 888777766


Q ss_pred             cccCeEEEEE-CCCCCEEEEEc
Q psy15995        271 HSRFVQAVRY-SPSGSHFASAG  291 (683)
Q Consensus       271 ~~~~v~~~~~-~~~~~~l~~~~  291 (683)
                      ....+++++| -++.+.|+..+
T Consensus       223 p~~~~t~~~fgg~~~~~L~vTt  244 (246)
T PF08450_consen  223 PVPRPTNCAFGGPDGKTLYVTT  244 (246)
T ss_dssp             SSSSEEEEEEESTTSSEEEEEE
T ss_pred             CCCCEEEEEEECCCCCEEEEEe
Confidence            6568999999 46666555443

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.90  E-value=2.7e-06  Score=81.59  Aligned_cols=299  Identities=13%  Similarity=0.152  Sum_probs=156.6

Q ss_pred             CCCCCceeecCCCC--------CCceeeecccceeecCCCcccCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCccccc
Q psy15995          9 TQRGQPIVLGGDPK--------GKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDI   80 (683)
Q Consensus         9 ~p~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~   80 (683)
                      ||+++.+++.-+..        +..+++........+..+.  ........+||||+.+|+..++.|.+++..+++..+.
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~--~~~~~~~~~sP~g~~~~~v~~~nly~~~~~~~~~~~l   78 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP--PPKLQDAKWSPDGKYIAFVRDNNLYLRDLATGQETQL   78 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E--ETTBSEEEE-SSSTEEEEEETTEEEEESSTTSEEEES
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC--ccccccceeecCCCeeEEEecCceEEEECCCCCeEEe
Confidence            68888888733211        2223333333322222222  4567788899999999999999999999887754322


Q ss_pred             -ccC-------c---------ccceEEEEECCCCcEEEEecCC-CCEEEEeCCCcccccccccccCCCCcccceeeeeec
Q psy15995         81 -YTE-------H---------SCAVNVAKYSPSGFYIASGDIS-GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLT  142 (683)
Q Consensus        81 -~~~-------h---------~~~v~~~~~s~d~~~las~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (683)
                       ..|       -         -+.-..+.|||||++||....| ..|+.+.+..-..-..  ..               .
T Consensus        79 T~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~--~y---------------p  141 (353)
T PF00930_consen   79 TTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDS--QY---------------P  141 (353)
T ss_dssp             ES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTE--SS----------------
T ss_pred             ccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccc--cC---------------C
Confidence             112       0         1223678899999999987643 4455444322100000  00               0


Q ss_pred             ceeeeEeeccceEEEeecCCc--cEEEEeccccceeeecc---ccccCCCeeEEEEcCCCCeEEEEe-cCC--ceEEEEE
Q psy15995        143 SIRNILVLSIGFYIASGDISG--KVRIWDTVNKEHILKNE---FHPIGGPIKDIAWSPDNQRMVVVG-EGR--ERFGHVF  214 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~~-~~~--~~~~~~~  214 (683)
                      .+..+.+      =..|...-  .+.|+|+.+++......   ......-+..+.|.++++.+++.- ...  ...+.+.
T Consensus       142 ~~~~~~Y------Pk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~  215 (353)
T PF00930_consen  142 EVESIRY------PKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLC  215 (353)
T ss_dssp             EEEEEE--------BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEE
T ss_pred             ccccccc------CCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEE
Confidence            1111111      11222222  35668888776432111   123456688999999999444443 222  2234445


Q ss_pred             EccCCCceeeeec-CCcCe---EEEEee-cCCCeEEEEeeCCCeEEEE--cCCCCceeeeccccccCeE-EEEECCCCCE
Q psy15995        215 MSETGTSVGEISG-QSKPI---NSCDFK-PSRPFRIITGSEDNTIAVF--EGPPFKFKMTKQEHSRFVQ-AVRYSPSGSH  286 (683)
Q Consensus       215 ~~~~~~~~~~~~~-~~~~v---~~~~~~-~~~~~~l~~~~~d~~i~iw--~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~  286 (683)
                      +..++........ ....|   ....|. +++...+.....+|.-+++  +...+. ...+....-.|. -+.++++++.
T Consensus       216 d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~  294 (353)
T PF00930_consen  216 DASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNNR  294 (353)
T ss_dssp             EECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SSS-EEEEEEEECTSSE
T ss_pred             ECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCceeecccceEcCCCCE
Confidence            5555544333222 22222   355555 6666656666677765555  554444 334554555664 4778888775


Q ss_pred             EE-EEcC----CCcEEEEeCC-CCeeEEeccCCccccCeEEEEEccCCCEEEEEEC
Q psy15995        287 FA-SAGF----DGKVFLYDGA-SADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG  336 (683)
Q Consensus       287 l~-~~~~----dg~i~iw~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  336 (683)
                      ++ ++..    ...++..++. .++. ..+..  ..+.-..+.|+|++++++....
T Consensus       295 iyf~a~~~~p~~r~lY~v~~~~~~~~-~~LT~--~~~~~~~~~~Spdg~y~v~~~s  347 (353)
T PF00930_consen  295 IYFTANGDNPGERHLYRVSLDSGGEP-KCLTC--EDGDHYSASFSPDGKYYVDTYS  347 (353)
T ss_dssp             EEEEESSGGTTSBEEEEEETTETTEE-EESST--TSSTTEEEEE-TTSSEEEEEEE
T ss_pred             EEEEecCCCCCceEEEEEEeCCCCCe-EeccC--CCCCceEEEECCCCCEEEEEEc
Confidence            54 5554    2356666777 4444 44432  2222279999999998876543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.90  E-value=1.9e-06  Score=78.30  Aligned_cols=217  Identities=19%  Similarity=0.189  Sum_probs=141.5

Q ss_pred             CCeEEEEcCCCCceeeeccccc--cCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCC
Q psy15995        251 DNTIAVFEGPPFKFKMTKQEHS--RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDG  328 (683)
Q Consensus       251 d~~i~iw~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  328 (683)
                      +|+|..||..+++.+....-..  ....+. ..+++..+++++.++.+..||..+|+.+.....+......  .  ..++
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~--~--~~~~   76 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGA--P--VVDG   76 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSG--E--EEET
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccce--e--eecc
Confidence            6889999999998887765311  112211 3335667777788999999999999988877653221222  1  2245


Q ss_pred             CEEEEEECCCcEEEEECCCCceeeEE-EecCcc--eeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeecccc-
Q psy15995        329 TQLLTASGDKTCKLWDIETKSVVSEF-IMGNQV--EDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKP-  404 (683)
Q Consensus       329 ~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~-  404 (683)
                      ..+++++.++.+..+|..+++.+.+. ....+.  ..........++.++++..++.+..+|+.++.... ........ 
T Consensus        77 ~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w-~~~~~~~~~  155 (238)
T PF13360_consen   77 GRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLW-KYPVGEPRG  155 (238)
T ss_dssp             TEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEE-EEESSTT-S
T ss_pred             cccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEE-EeecCCCCC
Confidence            56777778889999999999998884 333211  12233444468999999999999999998855432 22222211 


Q ss_pred             ---------EEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeE-EEEeCCeEEEEEcCCeEEEEeCCC
Q psy15995        405 ---------ITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQING-MKATGELLYTCGIDDTIKQVDLSS  474 (683)
Q Consensus       405 ---------v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~-~~~~~~~l~~~~~d~~i~~~~~~~  474 (683)
                               +..-....++ .++.++.++.+..+|+.+++..... .  ...... ....++.++..+.++.+..||+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~-~--~~~~~~~~~~~~~~l~~~~~~~~l~~~d~~t  231 (238)
T PF13360_consen  156 SSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWSK-P--ISGIYSLPSVDGGTLYVTSSDGRLYALDLKT  231 (238)
T ss_dssp             S--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEEE-C--SS-ECECEECCCTEEEEEETTTEEEEEETTT
T ss_pred             CcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEEe-c--CCCccCCceeeCCEEEEEeCCCEEEEEECCC
Confidence                     1222222344 7777777886444499999865322 2  222333 556689999888999999999998


Q ss_pred             Ccc
Q psy15995        475 NAY  477 (683)
Q Consensus       475 ~~~  477 (683)
                      ++.
T Consensus       232 G~~  234 (238)
T PF13360_consen  232 GKV  234 (238)
T ss_dssp             TEE
T ss_pred             CCE
Confidence            753

...

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.89  E-value=1.7e-06  Score=78.63  Aligned_cols=220  Identities=17%  Similarity=0.156  Sum_probs=139.8

Q ss_pred             CCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeE--eeccceEEEeecCCccEEEEeccccceeeecccc
Q psy15995        105 ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNIL--VLSIGFYIASGDISGKVRIWDTVNKEHILKNEFH  182 (683)
Q Consensus       105 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  182 (683)
                      .+|+|..||..+++.+.+....+               ......  ..+++.++++++.++.+..||..+|+.+......
T Consensus         1 ~~g~l~~~d~~tG~~~W~~~~~~---------------~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~   65 (238)
T PF13360_consen    1 DDGTLSALDPRTGKELWSYDLGP---------------GIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLP   65 (238)
T ss_dssp             -TSEEEEEETTTTEEEEEEECSS---------------SCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECS
T ss_pred             CCCEEEEEECCCCCEEEEEECCC---------------CCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeecc
Confidence            36789999999998888775532               111122  3445667777789999999999999988777763


Q ss_pred             ccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeee-ecCCc---CeEEEEeecCCCeEEEEeeCCCeEEEEc
Q psy15995        183 PIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEI-SGQSK---PINSCDFKPSRPFRIITGSEDNTIAVFE  258 (683)
Q Consensus       183 ~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~v~~~~~~~~~~~~l~~~~~d~~i~iw~  258 (683)
                      .   .+.... ..++..+++...++  .+..++..+|+.+... .....   ..........+. .++.+..++.+..+|
T Consensus        66 ~---~~~~~~-~~~~~~v~v~~~~~--~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~l~~~d  138 (238)
T PF13360_consen   66 G---PISGAP-VVDGGRVYVGTSDG--SLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGD-RLYVGTSSGKLVALD  138 (238)
T ss_dssp             S---CGGSGE-EEETTEEEEEETTS--EEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETT-EEEEEETCSEEEEEE
T ss_pred             c---ccccee-eeccccccccccee--eeEecccCCcceeeeeccccccccccccccCceEecC-EEEEEeccCcEEEEe
Confidence            2   222212 22344555555443  3677778889888874 33311   112222222355 488888899999999


Q ss_pred             CCCCceeeeccccccC----------eEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCC
Q psy15995        259 GPPFKFKMTKQEHSRF----------VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDG  328 (683)
Q Consensus       259 ~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  328 (683)
                      ..+++.+.........          +..-....++ .++.++.++.+..+|..+++.+....    ...+.. ....++
T Consensus       139 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~~----~~~~~~-~~~~~~  212 (238)
T PF13360_consen  139 PKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWSKP----ISGIYS-LPSVDG  212 (238)
T ss_dssp             TTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEEEC----SS-ECE-CEECCC
T ss_pred             cCCCcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEEec----CCCccC-CceeeC
Confidence            9999987776553322          1222233344 77777778864444999998664332    112222 134567


Q ss_pred             CEEEEEECCCcEEEEECCCCceee
Q psy15995        329 TQLLTASGDKTCKLWDIETKSVVS  352 (683)
Q Consensus       329 ~~l~~~~~dg~i~iwd~~~~~~~~  352 (683)
                      ..++.++.++.+..||+.+++.+.
T Consensus       213 ~~l~~~~~~~~l~~~d~~tG~~~W  236 (238)
T PF13360_consen  213 GTLYVTSSDGRLYALDLKTGKVVW  236 (238)
T ss_dssp             TEEEEEETTTEEEEEETTTTEEEE
T ss_pred             CEEEEEeCCCEEEEEECCCCCEEe
Confidence            888888899999999999998754

...

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.88  E-value=1.1e-07  Score=81.57  Aligned_cols=276  Identities=16%  Similarity=0.198  Sum_probs=165.2

Q ss_pred             cccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCc-ce---eccCCC------------CcceeEEEEe----CCeEEEE
Q psy15995        402 NKPITALALSPDRGTVFTGSHDGFITRWNAKTGEN-DR---VQGAGH------------GNQINGMKAT----GELLYTC  461 (683)
Q Consensus       402 ~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~-~~---~~~~~~------------~~~v~~~~~~----~~~l~~~  461 (683)
                      ...|+++.|...|.++++|...|.|.+|.-....- ..   ...+.|            ...|..+.+.    ...++..
T Consensus        26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls  105 (460)
T COG5170          26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS  105 (460)
T ss_pred             cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence            45799999999999999999999999997554331 11   001222            2356667665    4567788


Q ss_pred             EcCCeEEEEeCCCCcccCCce-ecCC---CCce-eeecCC--eEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCC
Q psy15995        462 GIDDTIKQVDLSSNAYSGPEV-KLGS---QPRG-LDIDEN--TLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHG  534 (683)
Q Consensus       462 ~~d~~i~~~~~~~~~~~~~~~-~~~~---~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  534 (683)
                      +.|.+|++|.+.......... .+..   .+.. ...+..  .+.........+.....++....+...+.++++..|..
T Consensus       106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~e  185 (460)
T COG5170         106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKE  185 (460)
T ss_pred             cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchh
Confidence            899999999987663321111 0000   0000 000000  00001111112222334444556778889999999998


Q ss_pred             EEEEEcCCCcEEEEEcCCCccCccee-e------cCCcCeeEEEECCC-CCEEEEEeCCCeEEEEECCCCccccc-----
Q psy15995        535 LVAVGGADSKVHIYELNNKSLSPKAE-L------DHLGPVTDCSFSPS-NEYLVASDAHRKVVLYRVPDFELAHN-----  601 (683)
Q Consensus       535 ~l~~~~~dg~i~i~d~~~~~~~~~~~-~------~~~~~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~~~~~~~-----  601 (683)
                      .++++ .|=.|.+|+++-........ +      .-..-|++..|+|. ...+...+..|.|++-|+....+...     
T Consensus       186 t~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klf  264 (460)
T COG5170         186 TLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLF  264 (460)
T ss_pred             eeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhh
Confidence            88876 45678889876432211111 1      12245888999994 45666677889999999974322110     


Q ss_pred             -c--------ceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceee-Eeec----------CCCCCCe---eEE
Q psy15995        602 -K--------EWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHI-IIKN----------AHPQSQI---TRL  658 (683)
Q Consensus       602 -~--------~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~-~~~~----------~~~~~~v---~~l  658 (683)
                       .        .+.+-...|..+.|+++|+++++-+. -+|++||+...+... +++.          .-.++.|   ..+
T Consensus       265 e~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFei  343 (460)
T COG5170         265 ELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEI  343 (460)
T ss_pred             hhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEEE
Confidence             0        00112346888999999999987654 479999998765433 2211          0012333   357


Q ss_pred             EEc-cCCeEEEeeCCCcEEEEe
Q psy15995        659 QWL-DNDLLVSVGQDCNTKIWE  679 (683)
Q Consensus       659 ~~~-~~~~l~s~~~d~~v~vw~  679 (683)
                      .|+ |+..+++|+..+...++-
T Consensus       344 sfSgd~~~v~sgsy~NNfgiyp  365 (460)
T COG5170         344 SFSGDDKHVLSGSYSNNFGIYP  365 (460)
T ss_pred             EecCCcccccccccccceeeec
Confidence            777 778888888877766665

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.88  E-value=1.6e-05  Score=71.76  Aligned_cols=274  Identities=15%  Similarity=0.155  Sum_probs=155.0

Q ss_pred             CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC----------CCcEEEEECCCCceeeEEEecCc----
Q psy15995        294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG----------DKTCKLWDIETKSVVSEFIMGNQ----  359 (683)
Q Consensus       294 g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~----  359 (683)
                      ++++++|..+++.+-.+.    .+..-.+..+|+++.+++++.          .-.|.+||..+.....++.....    
T Consensus        17 ~rv~viD~d~~k~lGmi~----~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~   92 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMID----TGFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQ   92 (342)
T ss_dssp             EEEEEEETTTTEEEEEEE----EESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--
T ss_pred             ceEEEEECCCCcEEEEee----cccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhe
Confidence            479999999999888773    445556778999999887532          33599999999999888876653    


Q ss_pred             --ceeceEEEEecCCEEEEEecC--CcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCC-C
Q psy15995        360 --VEDQQVSCLWQGDYLLTVSLS--GFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT-G  434 (683)
Q Consensus       360 --~~~~~~~~~~~~~~l~~~~~~--g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~-~  434 (683)
                        .....+.++.+++++++....  ..|.+.|+... +.+..+..  ..+..+--++ .+.+.+-+.||.+....+.. +
T Consensus        93 ~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~-kvv~ei~~--PGC~~iyP~~-~~~F~~lC~DGsl~~v~Ld~~G  168 (342)
T PF06433_consen   93 VVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAK-KVVGEIDT--PGCWLIYPSG-NRGFSMLCGDGSLLTVTLDADG  168 (342)
T ss_dssp             BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTT-EEEEEEEG--TSEEEEEEEE-TTEEEEEETTSCEEEEEETSTS
T ss_pred             ecccccceEEccCCcEEEEEccCCCCeEEEEECCCC-ceeeeecC--CCEEEEEecC-CCceEEEecCCceEEEEECCCC
Confidence              122345566677776666544  35667776652 22222221  1111111112 23466667777777666653 2


Q ss_pred             CcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCce
Q psy15995        435 ENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAK  514 (683)
Q Consensus       435 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (683)
                      +......                          .+++....                                       
T Consensus       169 k~~~~~t--------------------------~~F~~~~d---------------------------------------  183 (342)
T PF06433_consen  169 KEAQKST--------------------------KVFDPDDD---------------------------------------  183 (342)
T ss_dssp             SEEEEEE--------------------------EESSTTTS---------------------------------------
T ss_pred             CEeEeec--------------------------cccCCCCc---------------------------------------
Confidence            2211100                          01111110                                       


Q ss_pred             eeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeec-----------CCcCeeEEEECCCCCEEEEEe
Q psy15995        515 VSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELD-----------HLGPVTDCSFSPSNEYLVASD  583 (683)
Q Consensus       515 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----------~~~~v~~~~~s~~~~~l~~~~  583 (683)
                             .-...-++...+..++-.+.+|.|+-.|+............           ..+.-.-+++++..++|.+-.
T Consensus       184 -------p~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLM  256 (342)
T PF06433_consen  184 -------PLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLM  256 (342)
T ss_dssp             --------B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEE
T ss_pred             -------ccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEe
Confidence                   00112223333444444556677777666655432111110           112334577877666665543


Q ss_pred             CC----------CeEEEEECCCCccccccceeeecccEEEEEecCCCC-eEEEe-ecCCcEEEEeCCCCceeeEeecCC
Q psy15995        584 AH----------RKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSA-LVASG-SLDTTIIIWSLASPAKHIIIKNAH  650 (683)
Q Consensus       584 ~d----------~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~-~l~~~-~~d~~v~iw~~~~~~~~~~~~~~~  650 (683)
                      ..          ..|.++|+.+++.+....+.   .++.+|+.+.|.+ +|.+. ..++.+.+||..+++.+..+....
T Consensus       257 h~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~---~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~lG  332 (342)
T PF06433_consen  257 HQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE---HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQLG  332 (342)
T ss_dssp             EE--TT-TTS-EEEEEEEETTTTEEEEEEEEE---EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---S
T ss_pred             cCCCCCCccCCceEEEEEECCCCeEEEEEeCC---CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhccC
Confidence            21          24888899999998877754   4688999999876 55444 457899999999999988886543

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.87  E-value=2.8e-09  Score=64.12  Aligned_cols=38  Identities=34%  Similarity=0.768  Sum_probs=36.0

Q ss_pred             cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEe
Q psy15995         76 AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWD  113 (683)
Q Consensus        76 ~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd  113 (683)
                      ++++++++|.++|++++|+|++++|++++.|+.|++||
T Consensus         2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            56778999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG0882|consensus

Probab=98.84  E-value=1.6e-07  Score=84.98  Aligned_cols=300  Identities=14%  Similarity=0.160  Sum_probs=194.2

Q ss_pred             ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCC--C-eeEEeccCCccccCeEEEEEccCCCEEEEEEC-CCcEEEEEC
Q psy15995        270 EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS--A-DLVSELGNPAHKGGVYAVAWKPDGTQLLTASG-DKTCKLWDI  345 (683)
Q Consensus       270 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~--~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~  345 (683)
                      .|.+.|+.+... ..+++.+++.||.++.|.-..  + +.+..+.  .|...|.+++.+.++.++.+.+. |..++++|+
T Consensus         7 mhrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isGvEfVKhFr--aHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDv   83 (558)
T KOG0882|consen    7 MHRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISGVEFVKHFR--AHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDV   83 (558)
T ss_pred             cccceeeeEeee-hhheEEeeecchhhhhcCCCCccceeehhhhH--HHHHHHHhhhccccceeEeeccCcccceeEEEe
Confidence            366666665443 456899999999999997443  1 3333333  38889999999999999999777 999999999


Q ss_pred             CCCceeeEEEecCcceeceEEEEecC--CEEE-EEecCCcEEEEecCCCCcce-eeeeeccccEEEEEEeCCCCEEEEEe
Q psy15995        346 ETKSVVSEFIMGNQVEDQQVSCLWQG--DYLL-TVSLSGFISYLDVNNPSTPI-RVIKGHNKPITALALSPDRGTVFTGS  421 (683)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~-~~~~~g~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~  421 (683)
                      ++-..+.-+....-.....+..++..  ..++ ....+|.+.++|-.....+. ..-.-|..+|..+.+.|-+..+++..
T Consensus        84 En~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD  163 (558)
T KOG0882|consen   84 ENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSID  163 (558)
T ss_pred             eccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeecc
Confidence            87765544433332222222222221  1333 33457899999988766443 34456999999999999999999999


Q ss_pred             CCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEE
Q psy15995        422 HDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTV  501 (683)
Q Consensus       422 ~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (683)
                      ..|.|.-|.... .. +...    ..                    ..|.+....                         
T Consensus       164 ~~gmVEyWs~e~-~~-qfPr----~~--------------------l~~~~K~eT-------------------------  192 (558)
T KOG0882|consen  164 ISGMVEYWSAEG-PF-QFPR----TN--------------------LNFELKHET-------------------------  192 (558)
T ss_pred             ccceeEeecCCC-cc-cCcc----cc--------------------ccccccccc-------------------------
Confidence            999999999764 11 0000    00                    001111110                         


Q ss_pred             EeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeec-------------------
Q psy15995        502 TVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELD-------------------  562 (683)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------------  562 (683)
                                 ........+..+.++.++|++..+.+-+.|..|+++...++++.+.....                   
T Consensus       193 -----------dLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~Vel  261 (558)
T KOG0882|consen  193 -----------DLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVEL  261 (558)
T ss_pred             -----------hhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeeh
Confidence                       00011113346789999999999999999999999999998765433210                   


Q ss_pred             -------------CCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccce----------------eeeccc---
Q psy15995        563 -------------HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEW----------------GFHSAK---  610 (683)
Q Consensus       563 -------------~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~----------------~~h~~~---  610 (683)
                                   ....-+.+.|...|++|+.++--| |++.++.++++....-.                +.+...   
T Consensus       262 gRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~gk~e~ir~~~~sl~q~~~k~~~~~~~~  340 (558)
T KOG0882|consen  262 GRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRILGKDEAIRFTRLSLYQGAQKSNLAALEV  340 (558)
T ss_pred             hhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEeccchhhhhhhHHHHhhhhhccchhhhh
Confidence                         012235678888999999887665 78888887655422100                001000   


Q ss_pred             ----EEEEEecCCCCeEEEeecCCcEEEE
Q psy15995        611 ----VNCVAWSPDSALVASGSLDTTIIIW  635 (683)
Q Consensus       611 ----v~~~~~s~d~~~l~~~~~d~~v~iw  635 (683)
                          =..+.+-+|..+++++-.-..++++
T Consensus       341 ~a~~np~~~~~~dpt~~c~a~kk~rfylf  369 (558)
T KOG0882|consen  341 AASNNPLLEFQKDPTIVCTAFKKNRFYLF  369 (558)
T ss_pred             hhccCcccccCCCCeEEEeeeecceEEEE
Confidence                0112356677788888888888888

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.83  E-value=6.4e-06  Score=82.62  Aligned_cols=301  Identities=12%  Similarity=0.103  Sum_probs=175.7

Q ss_pred             CCCeEEEecCCeEEEEeCCCCcccccccCccc------ceE--EEEECCCCcEEEEecCCCCEEEEeCCCcccccccccc
Q psy15995         55 KGKNFLYTNGNSVIIRNIENPAISDIYTEHSC------AVN--VAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFH  126 (683)
Q Consensus        55 ~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~------~v~--~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~  126 (683)
                      +++.++...++.++-.|.++++.+-.+.....      .+.  .+++. ++..++.++.++.|.-+|.++++.+.+....
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~  139 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN  139 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence            45555555678899999999987765543222      110  01111 2257778888999999999999988877655


Q ss_pred             cCCCCcccceeeeeecceeeeEeeccceEEEee---------cCCccEEEEeccccceeeeccccccC------------
Q psy15995        127 PIGGPIKDIGTLLSLTSIRNILVLSIGFYIASG---------DISGKVRIWDTVNKEHILKNEFHPIG------------  185 (683)
Q Consensus       127 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~---------~~d~~i~iwd~~~~~~~~~~~~~~~~------------  185 (683)
                      .......        .......+. ++ .++.+         +.++.+...|..+|+.+.+.......            
T Consensus       140 ~~~~~~~--------~i~ssP~v~-~~-~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~  209 (488)
T cd00216         140 DQVPPGY--------TMTGAPTIV-KK-LVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQ  209 (488)
T ss_pred             CCcCcce--------EecCCCEEE-CC-EEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcc
Confidence            3210000        000111121 23 33333         24688999999999988776653210            


Q ss_pred             ------CCe-eEEEEcCCCCeEEEEecCC----------------ceEEEEEEccCCCceeeeecCCcCeE------EEE
Q psy15995        186 ------GPI-KDIAWSPDNQRMVVVGEGR----------------ERFGHVFMSETGTSVGEISGQSKPIN------SCD  236 (683)
Q Consensus       186 ------~~i-~~~~~s~~~~~l~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~v~------~~~  236 (683)
                            ..+ ...++.+.+..+++...+.                ...+.-.+.++|+.+.....-.....      ...
T Consensus       210 ~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~  289 (488)
T cd00216         210 MWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPS  289 (488)
T ss_pred             eecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCe
Confidence                  001 1344555556666665432                11356667778888776542211110      011


Q ss_pred             ee----cCCC--eEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEE------------------cC
Q psy15995        237 FK----PSRP--FRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASA------------------GF  292 (683)
Q Consensus       237 ~~----~~~~--~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~------------------~~  292 (683)
                      +.    -++.  ..++.++.+|.+...|..+++.+......   ...++.+|  ..++.+                  ..
T Consensus       290 ~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~---~~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~  364 (488)
T cd00216         290 LADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV---EQPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPG  364 (488)
T ss_pred             EEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee---ccccccCC--ceEEEccccccccCcccccCCCCCCC
Confidence            11    1221  24778889999999999999987765421   11233444  233332                  23


Q ss_pred             CCcEEEEeCCCCeeEEeccCCccc------cCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEE
Q psy15995        293 DGKVFLYDGASADLVSELGNPAHK------GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVS  366 (683)
Q Consensus       293 dg~i~iw~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  366 (683)
                      +|.+.-.|..+|+.+.......+.      .+...-.....+..+++++.||.++.+|..+++.+.++..........+.
T Consensus       365 ~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~~~~~~~~~a~P~~  444 (488)
T cd00216         365 KGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWKFRTPSGIQATPMT  444 (488)
T ss_pred             ceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeEEECCCCceEcCEE
Confidence            678999999999988877542111      11111011124678888899999999999999999988776665555554


Q ss_pred             EEecC
Q psy15995        367 CLWQG  371 (683)
Q Consensus       367 ~~~~~  371 (683)
                      +..++
T Consensus       445 ~~~~g  449 (488)
T cd00216         445 YEVNG  449 (488)
T ss_pred             EEeCC
Confidence            44444

The alignment model contains an 8-bladed beta-propeller.

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.83  E-value=2e-06  Score=84.12  Aligned_cols=236  Identities=16%  Similarity=0.148  Sum_probs=145.2

Q ss_pred             CCCCCeEEEec--CCeEEEEeCCCCccccccc-CcccceEEEEEC--CCCcEEEEecCCCCEEEEeCCCccccccccccc
Q psy15995         53 DPKGKNFLYTN--GNSVIIRNIENPAISDIYT-EHSCAVNVAKYS--PSGFYIASGDISGKVRIWDTVNKEHILKNEFHP  127 (683)
Q Consensus        53 s~~~~~l~~~~--~~~i~v~~~~~~~~~~~~~-~h~~~v~~~~~s--~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~  127 (683)
                      .-||++|+.-.  +..|...+++.-+.-+.++ .....+..++|-  |+-.|++.+++..                    
T Consensus       138 ~ydGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~--------------------  197 (635)
T PRK02888        138 TYDGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFR--------------------  197 (635)
T ss_pred             ccceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccc--------------------
Confidence            45888888763  4455555555443322222 234455555554  6666776655421                    


Q ss_pred             CCCCcccceeeeeecceeeeEeeccceEEEe-ecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecC
Q psy15995        128 IGGPIKDIGTLLSLTSIRNILVLSIGFYIAS-GDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEG  206 (683)
Q Consensus       128 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~  206 (683)
                                         +-++|||+.+.. .-..+.+.+.|.++.+........   +....++++|||+++++.+.+
T Consensus       198 -------------------~PlpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vd---gnpd~v~~spdGk~afvTsyN  255 (635)
T PRK02888        198 -------------------IPLPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVD---GNLDNVDTDYDGKYAFSTCYN  255 (635)
T ss_pred             -------------------cccCCCCCEeecccceeEEEEEEECccceEEEEEEeC---CCcccceECCCCCEEEEeccC
Confidence                               123445544422 223466778888887666555544   456788999999999988743


Q ss_pred             CceEEEEEEccCCCceeeeecCCcCeEEEE--------eecCCCeEEEEeeCCCeEEEEcCCC-----Cceeeecccccc
Q psy15995        207 RERFGHVFMSETGTSVGEISGQSKPINSCD--------FKPSRPFRIITGSEDNTIAVFEGPP-----FKFKMTKQEHSR  273 (683)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~~l~~~~~d~~i~iw~~~~-----~~~~~~~~~~~~  273 (683)
                      ...         +..+..+...... ..+.        +.++|++..+   .++.|.+.|..+     .+....+. -..
T Consensus       256 sE~---------G~tl~em~a~e~d-~~vvfni~~iea~vkdGK~~~V---~gn~V~VID~~t~~~~~~~v~~yIP-VGK  321 (635)
T PRK02888        256 SEE---------GVTLAEMMAAERD-WVVVFNIARIEEAVKAGKFKTI---GGSKVPVVDGRKAANAGSALTRYVP-VPK  321 (635)
T ss_pred             ccc---------CcceeeeccccCc-eEEEEchHHHHHhhhCCCEEEE---CCCEEEEEECCccccCCcceEEEEE-CCC
Confidence            321         2222222111111 2223        3456775443   357899999887     33443333 455


Q ss_pred             CeEEEEECCCCCEEEEEcC-CCcEEEEeCCCCee------------EEeccCCccccCeEEEEEccCCCEEEEEECCCcE
Q psy15995        274 FVQAVRYSPSGSHFASAGF-DGKVFLYDGASADL------------VSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTC  340 (683)
Q Consensus       274 ~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i  340 (683)
                      ....+.++|||+++++++. +.++.+.|+.+.+.            .....   -.......+|.++|+...+..-|..|
T Consensus       322 sPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaeve---vGlGPLHTaFDg~G~aytslf~dsqv  398 (635)
T PRK02888        322 NPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPE---LGLGPLHTAFDGRGNAYTTLFLDSQI  398 (635)
T ss_pred             CccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeec---cCCCcceEEECCCCCEEEeEeeccee
Confidence            6788999999998876654 88999999987553            33332   23345677899999888888889999


Q ss_pred             EEEECCC
Q psy15995        341 KLWDIET  347 (683)
Q Consensus       341 ~iwd~~~  347 (683)
                      ..||+..
T Consensus       399 ~kwn~~~  405 (635)
T PRK02888        399 VKWNIEA  405 (635)
T ss_pred             EEEehHH
Confidence            9999876

>KOG1920|consensus

Probab=98.82  E-value=3.9e-05  Score=79.38  Aligned_cols=244  Identities=15%  Similarity=0.191  Sum_probs=138.6

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccC--C
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSET--G  219 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~--~  219 (683)
                      ..|.++.|..+...+..+...|.|.+-|.++.......   .-...|.+++||||++.++.+.........-.+++.  .
T Consensus        69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg---~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E  145 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEIVG---NVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAE  145 (1265)
T ss_pred             cceEEEEEecccceEEEEecCCcEEEEcccccceeeee---eccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhc
Confidence            47889999999999999999999999998876533222   234789999999999999999987643322222221  1


Q ss_pred             CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC-ceeeeccccccCeEEEEECCCCCEEEEE-----cCC
Q psy15995        220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF-KFKMTKQEHSRFVQAVRYSPSGSHFASA-----GFD  293 (683)
Q Consensus       220 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~-----~~d  293 (683)
                      +.+..-....+....+-|-....  -+-|+. |.....+.... +...... ..+.=+++.|--||+++|+.     ...
T Consensus       146 ~~L~~d~~~~sk~v~VGwGrkeT--qfrgs~-gr~~~~~~~~~ek~~~~~~-~~~~~~~IsWRgDg~~fAVs~~~~~~~~  221 (1265)
T KOG1920|consen  146 KPLDADDERKSKFVNVGWGRKET--QFRGSE-GRQAARQKIEKEKALEQIE-QDDHKTSISWRGDGEYFAVSFVESETGT  221 (1265)
T ss_pred             cccccccccccccceecccccce--eeecch-hhhcccccccccccccchh-hccCCceEEEccCCcEEEEEEEeccCCc
Confidence            11110001111122222222111  111111 11111110000 0000001 11223568999999999883     323


Q ss_pred             CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC---CCcEEEEECCCCceeeEEEecCcceeceEEEEec
Q psy15995        294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG---DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ  370 (683)
Q Consensus       294 g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (683)
                      ..|++||-+ |..-..-.  ...+.-.+++|-|.|..+++...   |+.|.++..+. -.-..+..              
T Consensus       222 RkirV~drE-g~Lns~se--~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNG-L~hg~f~l--------------  283 (1265)
T KOG1920|consen  222 RKIRVYDRE-GALNSTSE--PVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNG-LRHGEFVL--------------  283 (1265)
T ss_pred             eeEEEeccc-chhhcccC--cccccccceeecCCCCeEeeeeecCCCCcEEEEecCC-cccccccc--------------
Confidence            789999966 43332222  14445568999999998888643   44576765432 11111110              


Q ss_pred             CCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEE---EeCCCcEEEEcCCCCCc
Q psy15995        371 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFT---GSHDGFITRWNAKTGEN  436 (683)
Q Consensus       371 ~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~---~~~dg~i~~w~~~~~~~  436 (683)
                                                .+.....++..++|+.++..|++   ......|++|-+.+-..
T Consensus       284 --------------------------~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhW  326 (1265)
T KOG1920|consen  284 --------------------------PFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYHW  326 (1265)
T ss_pred             --------------------------CCcccccchheeeecCCCCceeeeecccccceEEEEEecCeEE
Confidence                                      01112334899999999999987   44455599999877654

>KOG1645|consensus

Probab=98.82  E-value=1.1e-06  Score=78.61  Aligned_cols=257  Identities=14%  Similarity=0.040  Sum_probs=153.9

Q ss_pred             EEEEeCCCCcccccccCcccceEEEEECCCCc-EEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeeccee
Q psy15995         67 VIIRNIENPAISDIYTEHSCAVNVAKYSPSGF-YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIR  145 (683)
Q Consensus        67 i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~-~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  145 (683)
                      +.+.+..+-+....+.+|...|..++|||..+ +|..++.+.+|+|.|+++...+..+..+               ..+.
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~---------------~~~w  239 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY---------------NQIW  239 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc---------------CCce
Confidence            55566555555667888999999999999776 7888999999999999998777666555               6788


Q ss_pred             eeEeeccc-eEEEeecCCccEEEEeccccceeee-ccccccCCCeeEEEEc------CCCCeEEEEecCCceEEEEEEcc
Q psy15995        146 NILVLSIG-FYIASGDISGKVRIWDTVNKEHILK-NEFHPIGGPIKDIAWS------PDNQRMVVVGEGRERFGHVFMSE  217 (683)
Q Consensus       146 ~~~~s~~~-~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~i~~~~~s------~~~~~l~~~~~~~~~~~~~~~~~  217 (683)
                      +++|.-|. .+|..|...|.|.+||+...+.... ..-.-...+|..++.-      +.+..++....+    ...|...
T Consensus       240 SC~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~----l~f~ei~  315 (463)
T KOG1645|consen  240 SCCWDLDERHVIYAGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV----LQFYEIV  315 (463)
T ss_pred             eeeeccCCcceeEEeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh----hhhhhhh
Confidence            88888765 5888899999999999987543221 1111122445544433      334444444433    2233322


Q ss_pred             --CCCceeeee-cCCcCeEEEEeecCCCeEEEEeeCCCe------EEE-EcCCCCceeeec-ccccc-------CeEEEE
Q psy15995        218 --TGTSVGEIS-GQSKPINSCDFKPSRPFRIITGSEDNT------IAV-FEGPPFKFKMTK-QEHSR-------FVQAVR  279 (683)
Q Consensus       218 --~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~------i~i-w~~~~~~~~~~~-~~~~~-------~v~~~~  279 (683)
                        .+.....+. +..+...++++.+..+.++++.-.+.+      +-. -|..++..+... ..+.+       .-..+.
T Consensus       316 ~s~~~~p~vlele~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~  395 (463)
T KOG1645|consen  316 FSAECLPCVLELEPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIR  395 (463)
T ss_pred             ccccCCCcccccCCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCccccccccccee
Confidence              222222222 235566677777766665666544211      000 111122221111 11100       001122


Q ss_pred             ECCCCCEEE-EEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc-C-CCEEEEEECCCcEEEEECC
Q psy15995        280 YSPSGSHFA-SAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP-D-GTQLLTASGDKTCKLWDIE  346 (683)
Q Consensus       280 ~~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~~l~~~~~dg~i~iwd~~  346 (683)
                      -.++.++++ +++..+.+.+||..+.+.++.+.   -..+|.+++... + +.+|++-. |..++||..+
T Consensus       396 ~~~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~---~~epv~Dicp~~~n~~syLa~LT-d~~v~Iyk~e  461 (463)
T KOG1645|consen  396 AVEDNNYIVVVGDSTNELILQDPHSFEVVQTLA---LSEPVLDICPNDTNGSSYLALLT-DDRVHIYKNE  461 (463)
T ss_pred             ccccccEEEEecCCcceeEEeccchhheeeecc---cCcceeecceeecCCcchhhhee-cceEEEEecC
Confidence            234445444 45556789999999999999987   447888887754 3 34555554 5578888654

>KOG3617|consensus

Probab=98.82  E-value=2.9e-07  Score=90.29  Aligned_cols=116  Identities=18%  Similarity=0.219  Sum_probs=89.4

Q ss_pred             CCeeEEEEcCCCCeEEEEecCCceEEEEEE-ccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce
Q psy15995        186 GPIKDIAWSPDNQRMVVVGEGRERFGHVFM-SETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF  264 (683)
Q Consensus       186 ~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  264 (683)
                      +.-+-..|+|...++++++-....-+.+-. .++|++.... ..+-.+++++|+|..- .|+.|-.-|.+.+|...+.+.
T Consensus        16 avsti~SWHPsePlfAVA~fS~er~GSVtIfadtGEPqr~V-t~P~hatSLCWHpe~~-vLa~gwe~g~~~v~~~~~~e~   93 (1416)
T KOG3617|consen   16 AVSTISSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDV-TYPVHATSLCWHPEEF-VLAQGWEMGVSDVQKTNTTET   93 (1416)
T ss_pred             ccccccccCCCCceeEEEEecCCCCceEEEEecCCCCCccc-ccceehhhhccChHHH-HHhhccccceeEEEecCCcee
Confidence            444556799999898888765544444433 3456643322 1233466799999876 588888899999999988888


Q ss_pred             eeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCC
Q psy15995        265 KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS  303 (683)
Q Consensus       265 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  303 (683)
                      -.....|..+|..+.||++|..++++..-|.+.+|...-
T Consensus        94 htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~  132 (1416)
T KOG3617|consen   94 HTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDV  132 (1416)
T ss_pred             eeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeee
Confidence            888888999999999999999999999999999998663

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.79  E-value=5.7e-06  Score=74.54  Aligned_cols=270  Identities=16%  Similarity=0.135  Sum_probs=167.9

Q ss_pred             CCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC----------CccEEEEecccccee
Q psy15995        107 GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI----------SGKVRIWDTVNKEHI  176 (683)
Q Consensus       107 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----------d~~i~iwd~~~~~~~  176 (683)
                      +++.|.|..+++.+-.+..                .-...+.++||++.+.+.+.          .-.|.+||..+....
T Consensus        17 ~rv~viD~d~~k~lGmi~~----------------g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~   80 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDT----------------GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPT   80 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEE----------------ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEE
T ss_pred             ceEEEEECCCCcEEEEeec----------------ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCccc
Confidence            4688888888765544433                23445778999998776432          345999999998776


Q ss_pred             eecccccc-----CCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCC
Q psy15995        177 LKNEFHPI-----GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSED  251 (683)
Q Consensus       177 ~~~~~~~~-----~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  251 (683)
                      ....+++.     ......++++.|++++++........+.|.+...++.+.++....    |...-|.++..+.+-|.|
T Consensus        81 ~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PG----C~~iyP~~~~~F~~lC~D  156 (342)
T PF06433_consen   81 GEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPG----CWLIYPSGNRGFSMLCGD  156 (342)
T ss_dssp             EEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTS----EEEEEEEETTEEEEEETT
T ss_pred             ceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCC----EEEEEecCCCceEEEecC
Confidence            66666542     123456899999999999998888889999999998887765432    222234333358888889


Q ss_pred             CeEEEEcCC-CCceeeec----cccccCe-EEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEE--eccCC--c------c
Q psy15995        252 NTIAVFEGP-PFKFKMTK----QEHSRFV-QAVRYSPSGSHFASAGFDGKVFLYDGASADLVS--ELGNP--A------H  315 (683)
Q Consensus       252 ~~i~iw~~~-~~~~~~~~----~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~--~------~  315 (683)
                      |.+.-..+. .++.....    .....++ ..-++...+..++-.+.+|.|+--|+.......  .....  .      .
T Consensus       157 Gsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~Wr  236 (342)
T PF06433_consen  157 GSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWR  236 (342)
T ss_dssp             SCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEE
T ss_pred             CceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcC
Confidence            998888766 45443221    1112222 233444455556667788999998877654321  22110  0      1


Q ss_pred             ccCeEEEEEccCCCEEEEEEC---CC-------cEEEEECCCCceeeEEEecCcceeceEEEEecCC-EEEEE-ecCCcE
Q psy15995        316 KGGVYAVAWKPDGTQLLTASG---DK-------TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD-YLLTV-SLSGFI  383 (683)
Q Consensus       316 ~~~i~~~~~~~~~~~l~~~~~---dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~-~~~g~i  383 (683)
                      .+.-.-+++++..++|++.-.   ++       .|.++|+.+++.+.++.....  ...+..+.+.+ +|++. ..++.+
T Consensus       237 PGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~--~~Si~Vsqd~~P~L~~~~~~~~~l  314 (342)
T PF06433_consen  237 PGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHP--IDSIAVSQDDKPLLYALSAGDGTL  314 (342)
T ss_dssp             E-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEE--ESEEEEESSSS-EEEEEETTTTEE
T ss_pred             CcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCc--cceEEEccCCCcEEEEEcCCCCeE
Confidence            233445778776666655422   11       488889999999999887653  44666676655 55444 457899


Q ss_pred             EEEecCCCCcceeeee
Q psy15995        384 SYLDVNNPSTPIRVIK  399 (683)
Q Consensus       384 ~~~~~~~~~~~~~~~~  399 (683)
                      .+||..++ +.++.+.
T Consensus       315 ~v~D~~tG-k~~~~~~  329 (342)
T PF06433_consen  315 DVYDAATG-KLVRSIE  329 (342)
T ss_dssp             EEEETTT---EEEEE-
T ss_pred             EEEeCcCC-cEEeehh
Confidence            99999984 4444444

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.78  E-value=1.3e-05  Score=80.51  Aligned_cols=297  Identities=13%  Similarity=0.074  Sum_probs=157.8

Q ss_pred             CcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEecccccee
Q psy15995         97 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHI  176 (683)
Q Consensus        97 ~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~  176 (683)
                      +..+..++.++.|.-.|..+++.+.+.+..........  .    .....+++. ++..++.++.++.|.-+|.++|+.+
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~--~----~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~  133 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCC--D----VVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQV  133 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCcccccc--c----cccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEe
Confidence            33566677789999999999988877655431000000  0    000011111 2257777888999999999999988


Q ss_pred             eeccccccCCCeeEEEEcC--CCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeE
Q psy15995        177 LKNEFHPIGGPIKDIAWSP--DNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTI  254 (683)
Q Consensus       177 ~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i  254 (683)
                      .+.........-..+.-+|  .+..++++..+..                                    ...++.++.+
T Consensus       134 W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~------------------------------------~~~~~~~g~v  177 (488)
T cd00216         134 WKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAE------------------------------------FFACGVRGAL  177 (488)
T ss_pred             eeecCCCCcCcceEecCCCEEECCEEEEeccccc------------------------------------cccCCCCcEE
Confidence            8776553210000011111  0112222111100                                    0011223455


Q ss_pred             EEEcCCCCceeeeccccc--------------------cCe-EEEEECCCCCEEEEEcCCC------------------c
Q psy15995        255 AVFEGPPFKFKMTKQEHS--------------------RFV-QAVRYSPSGSHFASAGFDG------------------K  295 (683)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~--------------------~~v-~~~~~~~~~~~l~~~~~dg------------------~  295 (683)
                      ..+|..+++.+-......                    ..+ ...++.+.+..++.++.++                  .
T Consensus       178 ~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~  257 (488)
T cd00216         178 RAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDS  257 (488)
T ss_pred             EEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceee
Confidence            555555555444332210                    001 1244555566777776555                  7


Q ss_pred             EEEEeCCCCeeEEeccCCcccc----CeEEEEEc----cCCC---EEEEEECCCcEEEEECCCCceeeEEEecCcceece
Q psy15995        296 VFLYDGASADLVSELGNPAHKG----GVYAVAWK----PDGT---QLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQ  364 (683)
Q Consensus       296 i~iw~~~~~~~~~~~~~~~~~~----~i~~~~~~----~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  364 (683)
                      |.-+|.++|+.........+..    ......+.    -++.   .++.++.+|.+...|.++++.+.+......    .
T Consensus       258 l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~~----~  333 (488)
T cd00216         258 IVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVEQ----P  333 (488)
T ss_pred             EEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeecc----c
Confidence            9999999999988875422211    00001111    1333   577888899999999999998877654311    1


Q ss_pred             EEEEecCCEEEEE------------------ecCCcEEEEecCCCCcceeeeee-cc------ccEEEEEEeCCCCEEEE
Q psy15995        365 VSCLWQGDYLLTV------------------SLSGFISYLDVNNPSTPIRVIKG-HN------KPITALALSPDRGTVFT  419 (683)
Q Consensus       365 ~~~~~~~~~l~~~------------------~~~g~i~~~~~~~~~~~~~~~~~-~~------~~v~~~~~~~~~~~l~~  419 (683)
                      ....+  +.++++                  ..+|.+.-+|..+++..-+.-.. +.      .+...-...-.+..++.
T Consensus       334 ~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~  411 (488)
T cd00216         334 MAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFA  411 (488)
T ss_pred             cccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEE
Confidence            11111  333332                  13466777777665433222111 00      11111011124578889


Q ss_pred             EeCCCcEEEEcCCCCCcceeccC
Q psy15995        420 GSHDGFITRWNAKTGENDRVQGA  442 (683)
Q Consensus       420 ~~~dg~i~~w~~~~~~~~~~~~~  442 (683)
                      ++.||.|+.+|..+++.+-....
T Consensus       412 g~~dG~l~ald~~tG~~lW~~~~  434 (488)
T cd00216         412 GAADGYFRAFDATTGKELWKFRT  434 (488)
T ss_pred             ECCCCeEEEEECCCCceeeEEEC
Confidence            99999999999999998776643

The alignment model contains an 8-bladed beta-propeller.

>KOG1920|consensus

Probab=98.76  E-value=2e-05  Score=81.32  Aligned_cols=280  Identities=15%  Similarity=0.162  Sum_probs=158.1

Q ss_pred             ceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCccee
Q psy15995        360 VEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRV  439 (683)
Q Consensus       360 ~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~  439 (683)
                      .....+.+..+.+.++.+...|.|.+-|.....  ......-...|.+++|+||++.++..+..+++.+-+- +-.++..
T Consensus        69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~--~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~-~f~~i~E  145 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNSICVITALGDIILVDPETLE--LEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTK-DFEPIAE  145 (1265)
T ss_pred             cceEEEEEecccceEEEEecCCcEEEEcccccc--eeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEec-cccchhc
Confidence            355666777789999999999999999776532  2333445678999999999999999888777766432 2221111


Q ss_pred             ccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeec
Q psy15995        440 QGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLP  519 (683)
Q Consensus       440 ~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  519 (683)
                      ... +..     ....+..+..+....=..+.-..+.....+...                          ..+......
T Consensus       146 ~~L-~~d-----~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~--------------------------~ek~~~~~~  193 (1265)
T KOG1920|consen  146 KPL-DAD-----DERKSKFVNVGWGRKETQFRGSEGRQAARQKIE--------------------------KEKALEQIE  193 (1265)
T ss_pred             ccc-ccc-----cccccccceecccccceeeecchhhhccccccc--------------------------ccccccchh
Confidence            110 000     000112222222221111111111000000000                          000001112


Q ss_pred             CCCCCcEEEEccCCCEEEEE-----cCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEe---CCCeEEEE
Q psy15995        520 IDYEPSSISLDHEHGLVAVG-----GADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASD---AHRKVVLY  591 (683)
Q Consensus       520 ~~~~~~~~~~~~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~d~~i~i~  591 (683)
                      ....-+.++|-.||+++|+.     ....+|++||.+ +.+. .......+--.+++|-|.|..+++-.   .|+.|.+|
T Consensus       194 ~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Ln-s~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~Ivff  271 (1265)
T KOG1920|consen  194 QDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALN-STSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFF  271 (1265)
T ss_pred             hccCCceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhh-cccCcccccccceeecCCCCeEeeeeecCCCCcEEEE
Confidence            23344679999999999983     333789999988 4433 22222334456899999999999753   45679999


Q ss_pred             ECCC---CccccccceeeecccEEEEEecCCCCeEEE---eecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEccC--
Q psy15995        592 RVPD---FELAHNKEWGFHSAKVNCVAWSPDSALVAS---GSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDN--  663 (683)
Q Consensus       592 ~~~~---~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~---~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~--  663 (683)
                      .-+.   ++.......  ...+|..++|+.++..||+   ......|++|-+.+-.........-+....  +.|.+.  
T Consensus       272 ErNGL~hg~f~l~~p~--de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~--~~W~p~~~  347 (1265)
T KOG1920|consen  272 ERNGLRHGEFVLPFPL--DEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL--LMWDPVTE  347 (1265)
T ss_pred             ecCCccccccccCCcc--cccchheeeecCCCCceeeeecccccceEEEEEecCeEEEEEEEEecccccc--ccccCCCc
Confidence            8764   222222221  3445999999999999998   555556999998876544332211122222  666632  


Q ss_pred             CeEEEeeCCCcEEEEee
Q psy15995        664 DLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       664 ~~l~s~~~d~~v~vw~~  680 (683)
                      ..|..-..+|...++++
T Consensus       348 ~~L~v~~~sG~~~v~~~  364 (1265)
T KOG1920|consen  348 KTLHVLRESGQRLVRDF  364 (1265)
T ss_pred             eeEEEEecCCcEEEEEE
Confidence            23443335666555543

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.75  E-value=7e-06  Score=78.82  Aligned_cols=315  Identities=16%  Similarity=0.183  Sum_probs=158.4

Q ss_pred             CCCCCeEEEe----------cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccc
Q psy15995         53 DPKGKNFLYT----------NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILK  122 (683)
Q Consensus        53 s~~~~~l~~~----------~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~  122 (683)
                      |||++++++.          ..+.+.|||+++++...... ....+....|||||+++|... ++.|.+++..++... .
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~-~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~-~   77 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTP-PPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQET-Q   77 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS--EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEE-E
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcC-CccccccceeecCCCeeEEEe-cCceEEEECCCCCeE-E
Confidence            7999998884          33689999999987765443 377899999999999999885 568999988776322 1


Q ss_pred             cccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEE
Q psy15995        123 NEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVV  202 (683)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  202 (683)
                      +.....                         ..+..|-.|     |-.  .+.+    +    +.-..+-||||+++|+.
T Consensus        78 lT~dg~-------------------------~~i~nG~~d-----wvy--eEEv----~----~~~~~~~WSpd~~~la~  117 (353)
T PF00930_consen   78 LTTDGE-------------------------PGIYNGVPD-----WVY--EEEV----F----DRRSAVWWSPDSKYLAF  117 (353)
T ss_dssp             SES--T-------------------------TTEEESB-------HHH--HHHT----S----SSSBSEEE-TTSSEEEE
T ss_pred             eccccc-------------------------eeEEcCccc-----eec--cccc----c----ccccceEECCCCCEEEE
Confidence            111110                         001111110     000  0110    1    22356899999999988


Q ss_pred             EecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceee-e-c---cccccCeEE
Q psy15995        203 VGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM-T-K---QEHSRFVQA  277 (683)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-~-~---~~~~~~v~~  277 (683)
                      ...+....-.+........-.    ....+..+.+-.-|.. .    ..-.+.++|+.+++... . .   ......+..
T Consensus       118 ~~~d~~~v~~~~~~~~~~~~~----~yp~~~~~~YPk~G~~-n----p~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~  188 (353)
T PF00930_consen  118 LRFDEREVPEYPLPDYSPPDS----QYPEVESIRYPKAGDP-N----PRVSLFVVDLASGKTTELDPPNSLNPQDYYLTR  188 (353)
T ss_dssp             EEEE-TTS-EEEEEEESSSTE----SS-EEEEEE--BTTS--------EEEEEEEESSSTCCCEE---HHHHTSSEEEEE
T ss_pred             EEECCcCCceEEeeccCCccc----cCCcccccccCCCCCc-C----CceEEEEEECCCCcEEEeeeccccCCCccCccc
Confidence            765543322222211110000    0012333333222221 0    11235567777766432 1 1   234567889


Q ss_pred             EEECCCCCEEEEE--cCCC---cEEEEeCCCCeeEEeccC--CccccCeEEEEEc-cCCC-EEEEEECCCcEE--EEECC
Q psy15995        278 VRYSPSGSHFASA--GFDG---KVFLYDGASADLVSELGN--PAHKGGVYAVAWK-PDGT-QLLTASGDKTCK--LWDIE  346 (683)
Q Consensus       278 ~~~~~~~~~l~~~--~~dg---~i~iw~~~~~~~~~~~~~--~~~~~~i~~~~~~-~~~~-~l~~~~~dg~i~--iwd~~  346 (683)
                      +.|.++++.|+..  .++.   .+.+.|..++........  .+--..-....|. +++. ++.....+|.-+  +++..
T Consensus       189 v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~  268 (353)
T PF00930_consen  189 VGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLD  268 (353)
T ss_dssp             EEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETT
T ss_pred             ceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccc
Confidence            9999999844433  3332   466778777654333221  1111122344554 5555 444455666544  45555


Q ss_pred             CCceeeEEEecCccee-ceEEEEecCCEEEEEecC---CcEEEEecCCC-CcceeeeeeccccEEEEEEeCCCCEEEEEe
Q psy15995        347 TKSVVSEFIMGNQVED-QQVSCLWQGDYLLTVSLS---GFISYLDVNNP-STPIRVIKGHNKPITALALSPDRGTVFTGS  421 (683)
Q Consensus       347 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~---g~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  421 (683)
                      .+.. ..+. ...... ..+.+..+++.++..+..   +.-.+|.+... ......+......-..+.|+|++++++...
T Consensus       269 ~~~~-~~lT-~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~  346 (353)
T PF00930_consen  269 GGKP-RQLT-SGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTY  346 (353)
T ss_dssp             SSEE-EESS--SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEE
T ss_pred             ccce-eccc-cCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEE
Confidence            4442 2222 222222 355666666665544432   34455554443 333344443333336899999999988543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG2114|consensus

Probab=98.71  E-value=3.5e-06  Score=83.34  Aligned_cols=210  Identities=11%  Similarity=0.097  Sum_probs=136.6

Q ss_pred             eCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccc-eEEEEECCCCcEEEEecCCCC-----EEEEeCCCccccc---
Q psy15995         52 GDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCA-VNVAKYSPSGFYIASGDISGK-----VRIWDTVNKEHIL---  121 (683)
Q Consensus        52 ~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~-v~~~~~s~d~~~las~~~dg~-----i~iwd~~~~~~~~---  121 (683)
                      +++.+..++.+ .+|.|.++|- +-+.++-++.+... |+.+-...+..+|++.+.|++     |+|||++.-+.-.   
T Consensus        31 ~~s~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~  109 (933)
T KOG2114|consen   31 CSSSTGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQ  109 (933)
T ss_pred             EcCCCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcc
Confidence            68888888887 5788888763 33344667888777 555554455578888776654     9999997542111   


Q ss_pred             ---ccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEe--ccccceeeeccccccCCCeeEEEEcCC
Q psy15995        122 ---KNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWD--TVNKEHILKNEFHPIGGPIKDIAWSPD  196 (683)
Q Consensus       122 ---~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd--~~~~~~~~~~~~~~~~~~i~~~~~s~~  196 (683)
                         ....-+.       .......++..++++.+-+.+|+|-.+|.|..+.  +...+............+|+.+++..+
T Consensus       110 c~~~~ri~~~-------~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d  182 (933)
T KOG2114|consen  110 CLYEHRIFTI-------KNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSD  182 (933)
T ss_pred             eeeeeeeecc-------CCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecC
Confidence               0011110       0011236788999999999999999999999984  322222222223345689999999999


Q ss_pred             CCeE-EEEecCCceEEEEEEccCCCc-eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc-cccc
Q psy15995        197 NQRM-VVVGEGRERFGHVFMSETGTS-VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ-EHSR  273 (683)
Q Consensus       197 ~~~l-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~  273 (683)
                      ++.+ .++....   +.++......+ ...+..|...++|..+++.... +++++. ..+.+|+....+....+. +|..
T Consensus       183 ~~s~lFv~Tt~~---V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~q-fIca~~-e~l~fY~sd~~~~cfaf~~g~kk  257 (933)
T KOG2114|consen  183 GKSVLFVATTEQ---VMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQ-FICAGS-EFLYFYDSDGRGPCFAFEVGEKK  257 (933)
T ss_pred             CceeEEEEecce---eEEEEecCCCcceeeeccCCccceeeecCCCCcc-EEEecC-ceEEEEcCCCcceeeeecCCCeE
Confidence            9883 3333332   56666663332 4457888899999999988763 444443 569999987666666555 5544


Q ss_pred             C
Q psy15995        274 F  274 (683)
Q Consensus       274 ~  274 (683)
                      .
T Consensus       258 ~  258 (933)
T KOG2114|consen  258 E  258 (933)
T ss_pred             E
Confidence            3

>KOG1645|consensus

Probab=98.69  E-value=2.1e-06  Score=76.95  Aligned_cols=250  Identities=13%  Similarity=0.032  Sum_probs=145.2

Q ss_pred             CCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCC-EEEEEcCCCcEE
Q psy15995        219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGS-HFASAGFDGKVF  297 (683)
Q Consensus       219 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~  297 (683)
                      -+...-+.++...|..++|+|..+-++..++.+..|+|.|+++...+..+..+ ..+++++|.-|.. ++..|..+|.|.
T Consensus       183 fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~Vl  261 (463)
T KOG1645|consen  183 FKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVL  261 (463)
T ss_pred             cchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEE
Confidence            34444667888899999999998867899999999999999999988888877 7899999998765 788888899999


Q ss_pred             EEeCCCCee-EEeccCCccccCeEEEEEcc------CCCEEEEEECCCcEEEEECCCC--ceeeEEEecCcceeceEEEE
Q psy15995        298 LYDGASADL-VSELGNPAHKGGVYAVAWKP------DGTQLLTASGDKTCKLWDIETK--SVVSEFIMGNQVEDQQVSCL  368 (683)
Q Consensus       298 iw~~~~~~~-~~~~~~~~~~~~i~~~~~~~------~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~  368 (683)
                      +||++..+- +..+.......+|..++.-+      .+.+|+....  .+..|++...  ........+.+.....+...
T Consensus       262 vyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt--~l~f~ei~~s~~~~p~vlele~pG~cismqy~  339 (463)
T KOG1645|consen  262 VYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALT--VLQFYEIVFSAECLPCVLELEPPGICISMQYH  339 (463)
T ss_pred             EEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeeh--hhhhhhhhccccCCCcccccCCCcceeeeeec
Confidence            999986542 22222212345566655433      2333333333  2556655422  12222222222223333333


Q ss_pred             ecCCEEEEEecCC----c---EEE-EecCCCCcceeeeeec-ccc------EEEEEEeCCCCEEE-EEeCCCcEEEEcCC
Q psy15995        369 WQGDYLLTVSLSG----F---ISY-LDVNNPSTPIRVIKGH-NKP------ITALALSPDRGTVF-TGSHDGFITRWNAK  432 (683)
Q Consensus       369 ~~~~~l~~~~~~g----~---i~~-~~~~~~~~~~~~~~~~-~~~------v~~~~~~~~~~~l~-~~~~dg~i~~w~~~  432 (683)
                      +..+.+++.....    .   +.. .|...+......-..+ ..+      -..+.-.++.++++ +++..+.+.+||..
T Consensus       340 ~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D~~  419 (463)
T KOG1645|consen  340 GVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQDPH  419 (463)
T ss_pred             CccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCCcceeEEeccc
Confidence            3334444333221    0   000 1111111111111111 000      01121234445555 55666889999999


Q ss_pred             CCCcceeccCCCCcceeEEEEe---CCeEEEEEcCCeEEEEeCC
Q psy15995        433 TGENDRVQGAGHGNQINGMKAT---GELLYTCGIDDTIKQVDLS  473 (683)
Q Consensus       433 ~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~~~~~  473 (683)
                      +.+....+.  ...+|..+.+.   ++-++..-.|..++++..+
T Consensus       420 s~evvQ~l~--~~epv~Dicp~~~n~~syLa~LTd~~v~Iyk~e  461 (463)
T KOG1645|consen  420 SFEVVQTLA--LSEPVLDICPNDTNGSSYLALLTDDRVHIYKNE  461 (463)
T ss_pred             hhheeeecc--cCcceeecceeecCCcchhhheecceEEEEecC
Confidence            998887765  33677777765   4444445556777777544

>KOG1275|consensus

Probab=98.67  E-value=6.3e-07  Score=88.81  Aligned_cols=179  Identities=21%  Similarity=0.325  Sum_probs=139.0

Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEE
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVA  323 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~  323 (683)
                      .++.|+-...+..+|+++.+..+...-....|.-|+.  +++.+.+|...|+|.+-|.++.+.+.++..  |.+.|.++.
T Consensus       149 ~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~a--Hs~siSDfD  224 (1118)
T KOG1275|consen  149 TLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDA--HSGSISDFD  224 (1118)
T ss_pred             ceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeec--cccceeeee
Confidence            4888888888999999888877766555545655554  577899999999999999999999999976  999998866


Q ss_pred             EccCCCEEEEEEC---------CCcEEEEECCCCceeeEEEecCcceeceEEEEe-cCCEEEEEecCCcEEEEe---cCC
Q psy15995        324 WKPDGTQLLTASG---------DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW-QGDYLLTVSLSGFISYLD---VNN  390 (683)
Q Consensus       324 ~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~~---~~~  390 (683)
                      ..  |+.|++|+.         |.-|++||++..+.+..+.....  ...+.+.| -...+++.+..|...+.|   +.+
T Consensus       225 v~--GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~--P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsN  300 (1118)
T KOG1275|consen  225 VQ--GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYG--PQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSN  300 (1118)
T ss_pred             cc--CCeEEEeecccccccccccchhhhhhhhhhhccCCcccccC--chhhhhcccccceEEEEecccceeeccccccCC
Confidence            64  889999876         44589999998877665543332  24445555 356788899999999999   444


Q ss_pred             CCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEc
Q psy15995        391 PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN  430 (683)
Q Consensus       391 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~  430 (683)
                      +...+..+..-...+..+++++++..++.|..+|.|.+|.
T Consensus       301 P~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  301 PPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             CccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence            3333444444455699999999999999999999999997

>KOG2695|consensus

Probab=98.67  E-value=7.1e-08  Score=84.14  Aligned_cols=139  Identities=13%  Similarity=0.185  Sum_probs=106.5

Q ss_pred             EEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCC---ccccccceeeecccEEE
Q psy15995        537 AVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDF---ELAHNKEWGFHSAKVNC  613 (683)
Q Consensus       537 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~---~~~~~~~~~~h~~~v~~  613 (683)
                      ++.+.+..|.+-+++++...   .+...+.|.++.|...+.++..|..+|.|..+|+...   ..-....+- |...|++
T Consensus       228 fs~G~sqqv~L~nvetg~~q---sf~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvts  303 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQQ---SFQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTS  303 (425)
T ss_pred             ecccccceeEEEEeeccccc---ccccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhh
Confidence            44455677888999887643   2235678899999998999999999999999999864   222222333 9999999


Q ss_pred             EEecC-CCCeEEEeecCCcEEEEeCCCCce---eeEeecCCCCCCeeEEEEc---cCCeEEEeeCCCcEEEEeec
Q psy15995        614 VAWSP-DSALVASGSLDTTIIIWSLASPAK---HIIIKNAHPQSQITRLQWL---DNDLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       614 ~~~s~-d~~~l~~~~~d~~v~iw~~~~~~~---~~~~~~~~~~~~v~~l~~~---~~~~l~s~~~d~~v~vw~~~  681 (683)
                      +..-. ++++|.+.+.+|+|++||++.-++   +....+  |...-.-+-+.   .++.++++|.|+..++|.++
T Consensus       304 lq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeG--HvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~  376 (425)
T KOG2695|consen  304 LQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEG--HVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLD  376 (425)
T ss_pred             hhhhccccceEeeccCcCceeEeeehhhhcccceeeeec--ccccccccccccccccceEEEccCeeEEEEEecc
Confidence            98776 788999999999999999987776   555554  55544555554   44689999999999999987

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.65  E-value=2.1e-06  Score=83.92  Aligned_cols=102  Identities=11%  Similarity=0.059  Sum_probs=72.2

Q ss_pred             CCCCCEEEEEeCCCeEEEEECCC-----CccccccceeeecccEEEEEecCCCCeEEEeec-CCcEEEEeCCCCce----
Q psy15995        573 SPSNEYLVASDAHRKVVLYRVPD-----FELAHNKEWGFHSAKVNCVAWSPDSALVASGSL-DTTIIIWSLASPAK----  642 (683)
Q Consensus       573 s~~~~~l~~~~~d~~i~i~~~~~-----~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~-d~~v~iw~~~~~~~----  642 (683)
                      .++|++...  .+++|.+.|..+     .+......   -......+++||||+++++++. +.+|.|.|+.+.+.    
T Consensus       285 vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIP---VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~  359 (635)
T PRK02888        285 VKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVP---VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDG  359 (635)
T ss_pred             hhCCCEEEE--CCCEEEEEECCccccCCcceEEEEE---CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhc
Confidence            346776665  357799999887     33333222   3466788999999998877654 88999999988663    


Q ss_pred             --------eeEeecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEeecc
Q psy15995        643 --------HIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       643 --------~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~~~  682 (683)
                              ....+.   .-.....+|. ++....|---|..|..|++++
T Consensus       360 ~~~~~~~vvaevev---GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        360 KIKPRDAVVAEPEL---GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             cCCccceEEEeecc---CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence                    222222   3345677888 667777888999999999864

>KOG1832|consensus

Probab=98.65  E-value=5.9e-08  Score=95.40  Aligned_cols=254  Identities=12%  Similarity=0.110  Sum_probs=172.7

Q ss_pred             CCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCC--CEEEEeCCCc-ccc
Q psy15995         45 GQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISG--KVRIWDTVNK-EHI  120 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg--~i~iwd~~~~-~~~  120 (683)
                      ...+|++||.+.++|+.| ..|.|.++++.+|.......+|..+|+-+.=|.||..+.+.+.-.  -..+|++..- ...
T Consensus      1102 ~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~ 1181 (1516)
T KOG1832|consen 1102 ALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPR 1181 (1516)
T ss_pred             cceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccccccCcc
Confidence            457899999999999998 589999999999999999999999999999999998877655433  4789998652 222


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeecccc--ccCCCeeEEEEcCCCC
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFH--PIGGPIKDIAWSPDNQ  198 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~  198 (683)
                      ..+                  ..-.++.|+..-+.-+.|.......+||++++..+.++-..  .....-+...|+|+.+
T Consensus      1182 Hsf------------------~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~ 1243 (1516)
T KOG1832|consen 1182 HSF------------------DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDT 1243 (1516)
T ss_pred             ccc------------------cccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcc
Confidence            111                  33456778877666667777778999999998766543211  1112336788999988


Q ss_pred             eEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEE
Q psy15995        199 RMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAV  278 (683)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~  278 (683)
                      +++-   +    +.+|+....+.++.+.... .-..-.|+|.|.. ++.-+     .|||+++.+.++....-.  -..+
T Consensus      1244 LIln---d----GvLWDvR~~~aIh~FD~ft-~~~~G~FHP~g~e-VIINS-----EIwD~RTF~lLh~VP~Ld--qc~V 1307 (1516)
T KOG1832|consen 1244 LILN---D----GVLWDVRIPEAIHRFDQFT-DYGGGGFHPSGNE-VIINS-----EIWDMRTFKLLHSVPSLD--QCAV 1307 (1516)
T ss_pred             eEee---C----ceeeeeccHHHHhhhhhhe-ecccccccCCCce-EEeec-----hhhhhHHHHHHhcCcccc--ceEE
Confidence            7762   2    4788888777776665444 1223368999985 55544     489999999887665433  3567


Q ss_pred             EECCCCCEEEEEcC--C---------------CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEE
Q psy15995        279 RYSPSGSHFASAGF--D---------------GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS  335 (683)
Q Consensus       279 ~~~~~~~~l~~~~~--d---------------g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  335 (683)
                      .|+..|+.++..-.  |               ...+-++..+-..+.++.   -...+..++-.|...++...-
T Consensus      1308 tFNstG~VmYa~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~---v~R~~~Dlct~~~D~~l~vIe 1378 (1516)
T KOG1832|consen 1308 TFNSTGDVMYAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIP---VDRCLLDLCTEPTDSFLGVIE 1378 (1516)
T ss_pred             EeccCccchhhhhhhhhhhhhhcccccccchhhhhccccccccccceeee---cccchhhhhcCCccceEEEEe
Confidence            88888875543320  0               123334444444455544   344566666666666665543

>KOG2695|consensus

Probab=98.64  E-value=2.3e-07  Score=81.10  Aligned_cols=142  Identities=18%  Similarity=0.158  Sum_probs=104.0

Q ss_pred             CCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCc---cCcceeecCCcCeeEEEECC-CCCEEEEEeCCCeEEEEECCC
Q psy15995        520 IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKS---LSPKAELDHLGPVTDCSFSP-SNEYLVASDAHRKVVLYRVPD  595 (683)
Q Consensus       520 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~  595 (683)
                      .+..+-++.|...+.++..|+.+|.|..+|+..+.   .-+...+-|.+.|+++..-. ++++|++.+.+|+|++||..-
T Consensus       251 sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~  330 (425)
T KOG2695|consen  251 SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRA  330 (425)
T ss_pred             cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehh
Confidence            44567777888889999999999999999998652   12223334889999998777 889999999999999999986


Q ss_pred             Ccc-ccccceeeecccEEEE--EecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCC--CCCCeeEEEEc
Q psy15995        596 FEL-AHNKEWGFHSAKVNCV--AWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAH--PQSQITRLQWL  661 (683)
Q Consensus       596 ~~~-~~~~~~~~h~~~v~~~--~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~--~~~~v~~l~~~  661 (683)
                      -+. .....+.||-..-.-+  -..+....++++++|...+||.++.+.....++...  ....+.+++|.
T Consensus       331 ~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~  401 (425)
T KOG2695|consen  331 TKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFD  401 (425)
T ss_pred             hhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCCCccccccccceehh
Confidence            544 1223444454332222  234567789999999999999999999888775422  23356677776

>KOG1275|consensus

Probab=98.64  E-value=9e-07  Score=87.77  Aligned_cols=182  Identities=19%  Similarity=0.260  Sum_probs=132.6

Q ss_pred             cCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCccee
Q psy15995        370 QGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN  449 (683)
Q Consensus       370 ~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~  449 (683)
                      ++..++.|+....+..+|+..... .+...-....++-++  .+++.+.+|...|+|.+-|.++.+.+..+ ..|.+.+.
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e-~r~~~v~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~-~aHs~siS  221 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKE-TRTTNVSASGVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTF-DAHSGSIS  221 (1118)
T ss_pred             CCcceeecchhhheeeeeccccee-eeeeeccCCceEEEE--ecCcEEEeecccceEEeecCCcCceeeee-ecccccee
Confidence            567788888888888888876332 222222233455444  46789999999999999999999988887 67999999


Q ss_pred             EEEEeCCeEEEEEc---------CCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecC
Q psy15995        450 GMKATGELLYTCGI---------DDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPI  520 (683)
Q Consensus       450 ~~~~~~~~l~~~~~---------d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  520 (683)
                      .+...|+.|++++.         |..+++||++....                                     +..++.
T Consensus       222 DfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmra-------------------------------------l~PI~~  264 (1118)
T KOG1275|consen  222 DFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRA-------------------------------------LSPIQF  264 (1118)
T ss_pred             eeeccCCeEEEeecccccccccccchhhhhhhhhhhc-------------------------------------cCCccc
Confidence            99999999999985         55678898886532                                     222233


Q ss_pred             CCCCcEEEEccCC-CEEEEEcCCCcEEEEE---cCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEE
Q psy15995        521 DYEPSSISLDHEH-GLVAVGGADSKVHIYE---LNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYR  592 (683)
Q Consensus       521 ~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~  592 (683)
                      ...+.-+.|.|.- ..+++.+..|...+-|   +.+..............+..+++|++++.||.+..+|.|.+|.
T Consensus       265 ~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  265 PYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             ccCchhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence            3344555566653 4678888889999998   3333222222223445599999999999999999999999997

>KOG2114|consensus

Probab=98.62  E-value=1.3e-05  Score=79.57  Aligned_cols=209  Identities=15%  Similarity=0.201  Sum_probs=135.7

Q ss_pred             EEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcc-eeEEEEeC--CeEEEEEcCCe-----EEEEeCCCCcccCC
Q psy15995        409 ALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQ-INGMKATG--ELLYTCGIDDT-----IKQVDLSSNAYSGP  480 (683)
Q Consensus       409 ~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~-v~~~~~~~--~~l~~~~~d~~-----i~~~~~~~~~~~~~  480 (683)
                      ++++.+..++.|+.+|.|.+.+-.-... ..+ ..+... +..+....  +.|++.+.|+.     +++|+++......+
T Consensus        30 c~~s~~~~vvigt~~G~V~~Ln~s~~~~-~~f-qa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s  107 (933)
T KOG2114|consen   30 CCSSSTGSVVIGTADGRVVILNSSFQLI-RGF-QAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS  107 (933)
T ss_pred             EEcCCCceEEEeeccccEEEecccceee-ehh-eecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC
Confidence            4678899999999999998887443221 222 223333 55555543  47888877654     89999986532111


Q ss_pred             ceecCCCCceeeecCCeEEEEEeceEEEEeCCceee--eec-CCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCC---Cc
Q psy15995        481 EVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVS--SLP-IDYEPSSISLDHEHGLVAVGGADSKVHIYELNN---KS  554 (683)
Q Consensus       481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~---~~  554 (683)
                             |..+.            .       ..+.  ..| .+.++++++++.+-+.+|+|-.+|.|..+.-+-   ..
T Consensus       108 -------P~c~~------------~-------~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrg  161 (933)
T KOG2114|consen  108 -------PQCLY------------E-------HRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRG  161 (933)
T ss_pred             -------cceee------------e-------eeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccc
Confidence                   11000            0       0011  111 346788999999999999999999999885321   11


Q ss_pred             cCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEE
Q psy15995        555 LSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIII  634 (683)
Q Consensus       555 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~i  634 (683)
                      ...........+||.+++..+++.++.+..-.+|.+|.+.... ........|....+|-.|++....+++++. ..+.+
T Consensus       162 sr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~-p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~f  239 (933)
T KOG2114|consen  162 SRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRT-PSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYF  239 (933)
T ss_pred             cceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCC-cceeeeccCCccceeeecCCCCccEEEecC-ceEEE
Confidence            1112223367899999999999885555556779999998544 222323337788999999876654666654 45999


Q ss_pred             EeCCCCceeeEee
Q psy15995        635 WSLASPAKHIIIK  647 (683)
Q Consensus       635 w~~~~~~~~~~~~  647 (683)
                      |+.+..+....+.
T Consensus       240 Y~sd~~~~cfaf~  252 (933)
T KOG2114|consen  240 YDSDGRGPCFAFE  252 (933)
T ss_pred             EcCCCcceeeeec
Confidence            9998777766665

>KOG2066|consensus

Probab=98.60  E-value=2e-06  Score=84.32  Aligned_cols=186  Identities=16%  Similarity=0.158  Sum_probs=131.8

Q ss_pred             CcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCC
Q psy15995        445 GNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEP  524 (683)
Q Consensus       445 ~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  524 (683)
                      ...+.+..+.+..++.|+.+|.+++.+........                                      +.+.   
T Consensus        39 ~D~is~~av~~~~~~~GtH~g~v~~~~~~~~~~~~--------------------------------------~~~s---   77 (846)
T KOG2066|consen   39 NDAISCCAVHDKFFALGTHRGAVYLTTCQGNPKTN--------------------------------------FDHS---   77 (846)
T ss_pred             hhHHHHHHhhcceeeeccccceEEEEecCCccccc--------------------------------------cccc---
Confidence            34566777778999999999999999877642100                                      0000   


Q ss_pred             cEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCC-----CCEEEEEeCCCeEEEEECCCCccc
Q psy15995        525 SSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPS-----NEYLVASDAHRKVVLYRVPDFELA  599 (683)
Q Consensus       525 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~-----~~~l~~~~~d~~i~i~~~~~~~~~  599 (683)
                         +...+|.++++++.||+|.|..+.+.+......  ...++.+++++||     .+.+++|+..| +.++.-.=....
T Consensus        78 ---~~~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d--f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk  151 (846)
T KOG2066|consen   78 ---SSILEGEYVASCSDDGKVVIGSLFTDDEITQYD--FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNK  151 (846)
T ss_pred             ---ccccCCceEEEecCCCcEEEeeccCCccceeEe--cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCc
Confidence               015679999999999999999998887664443  5678999999997     67888999888 777765411111


Q ss_pred             cccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCC----CCCeeEEEEccCCeEEEeeCCCcE
Q psy15995        600 HNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHP----QSQITRLQWLDNDLLVSVGQDCNT  675 (683)
Q Consensus       600 ~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~----~~~v~~l~~~~~~~l~s~~~d~~v  675 (683)
                      .......-.++|.++.|  .|.++|-++++| |+|||+.+.+.+..++..+.    ..-...+.|.++..|+-|= ..+|
T Consensus       152 ~~v~l~~~eG~I~~i~W--~g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVIGW-~d~v  227 (846)
T KOG2066|consen  152 DSVVLSEGEGPIHSIKW--RGNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVIGW-GDSV  227 (846)
T ss_pred             cceeeecCccceEEEEe--cCcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEEec-CCeE
Confidence            11122225689999999  478999999888 99999999888877754321    1233578888777776654 4457


Q ss_pred             EEEeec
Q psy15995        676 KIWEIA  681 (683)
Q Consensus       676 ~vw~~~  681 (683)
                      ++..+.
T Consensus       228 ~i~~I~  233 (846)
T KOG2066|consen  228 KICSIK  233 (846)
T ss_pred             EEEEEe
Confidence            777664

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.58  E-value=0.00044  Score=69.70  Aligned_cols=304  Identities=13%  Similarity=0.103  Sum_probs=175.4

Q ss_pred             CCCeEEEecCCeEEEEeCCCCcccccccCcc-cceE---E-------EEECCCCcEEEEecCCCCEEEEeCCCccccccc
Q psy15995         55 KGKNFLYTNGNSVIIRNIENPAISDIYTEHS-CAVN---V-------AKYSPSGFYIASGDISGKVRIWDTVNKEHILKN  123 (683)
Q Consensus        55 ~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~-~~v~---~-------~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~  123 (683)
                      ++..++...++.|+-.|.++++.+-.+.... ..+.   +       +++  .+..++.++.|+.|.-.|..+|+.+.+.
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~~  146 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWSK  146 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEeec
Confidence            4444444566788888988888765543211 1111   1       122  2345667788999999999999988776


Q ss_pred             ccccCCCCcccceeeeeecceeeeEeeccceEEEeec-----CCccEEEEeccccceeeeccccccC-------------
Q psy15995        124 EFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD-----ISGKVRIWDTVNKEHILKNEFHPIG-------------  185 (683)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----~d~~i~iwd~~~~~~~~~~~~~~~~-------------  185 (683)
                      ........          ..+.+--..-++..++..+     .+|.|.-+|.++|+.+.........             
T Consensus       147 ~~~~~~~~----------~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~  216 (527)
T TIGR03075       147 KNGDYKAG----------YTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGG  216 (527)
T ss_pred             cccccccc----------ccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCccccccccccccc
Confidence            54321100          0011111111343333221     3688999999999887765443211             


Q ss_pred             ----------------CCe-eEEEEcCCCCeEEEEecCC--------------ceEEEEEEccCCCceeeeecCCcCeE-
Q psy15995        186 ----------------GPI-KDIAWSPDNQRMVVVGEGR--------------ERFGHVFMSETGTSVGEISGQSKPIN-  233 (683)
Q Consensus       186 ----------------~~i-~~~~~s~~~~~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~v~-  233 (683)
                                      +.+ ..+++.|+..+++....+.              ...+.-.+.++|+..-.++.....+. 
T Consensus       217 ~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD  296 (527)
T TIGR03075       217 EPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWD  296 (527)
T ss_pred             ccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCcc
Confidence                            011 2346666666666665331              11245566678888777665333222 


Q ss_pred             --------EEEeecCCC--eEEEEeeCCCeEEEEcCCCCceeeecc--c----------cc-cCe---------------
Q psy15995        234 --------SCDFKPSRP--FRIITGSEDNTIAVFEGPPFKFKMTKQ--E----------HS-RFV---------------  275 (683)
Q Consensus       234 --------~~~~~~~~~--~~l~~~~~d~~i~iw~~~~~~~~~~~~--~----------~~-~~v---------------  275 (683)
                              -+....+++  ..++.+..+|.+.+.|..+++.+...+  .          .. .++               
T Consensus       297 ~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~  376 (527)
T TIGR03075       297 YDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTGRPIEVPEARSADGKKGKP  376 (527)
T ss_pred             ccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCCCCCCccChhhCcCCCCCCCe
Confidence                    222223554  358899999999999999988752110  0          00 000               


Q ss_pred             -------------EEEEECCCCCEEEEEcCC---------------------------------CcEEEEeCCCCeeEEe
Q psy15995        276 -------------QAVRYSPSGSHFASAGFD---------------------------------GKVFLYDGASADLVSE  309 (683)
Q Consensus       276 -------------~~~~~~~~~~~l~~~~~d---------------------------------g~i~iw~~~~~~~~~~  309 (683)
                                   ..++++|+..+++....+                                 |.|.-+|+.+++....
T Consensus       377 ~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~  456 (527)
T TIGR03075       377 VGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPITGKIVWE  456 (527)
T ss_pred             eEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCCCCceeEEEEeCCCCceeeE
Confidence                         125666666555443322                                 4577788888887776


Q ss_pred             ccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCE
Q psy15995        310 LGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDY  373 (683)
Q Consensus       310 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (683)
                      ......  ...+. ..-.+..++.++.+|.++.+|.++++.+.++..........+.+..+++.
T Consensus       457 ~~~~~p--~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g~~~~a~P~ty~~~G~q  517 (527)
T TIGR03075       457 HKEDFP--LWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTGSGIVGPPVTYEQDGKQ  517 (527)
T ss_pred             ecCCCC--CCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeCCCCceecCEEEEeCCEE
Confidence            653211  11111 11245577778889999999999999999988876666666655555543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.57  E-value=1.5e-07  Score=56.46  Aligned_cols=38  Identities=32%  Similarity=0.526  Sum_probs=36.0

Q ss_pred             ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEe
Q psy15995        263 KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD  300 (683)
Q Consensus       263 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  300 (683)
                      +++..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus         2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            56788999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.55  E-value=0.00053  Score=63.58  Aligned_cols=247  Identities=14%  Similarity=0.051  Sum_probs=113.9

Q ss_pred             EeCCCCcccccccCcccc-----eEEEEECCCCcEEEEe-cCCC--CEEEEeCCCcccccccccccCCCCcccceeeeee
Q psy15995         70 RNIENPAISDIYTEHSCA-----VNVAKYSPSGFYIASG-DISG--KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSL  141 (683)
Q Consensus        70 ~~~~~~~~~~~~~~h~~~-----v~~~~~s~d~~~las~-~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (683)
                      -|..+|..+..|+.+...     -+.=+|.+||+.|+.+ ..||  .+.+-|+.+++..+-.....              
T Consensus        15 ~D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g--------------   80 (386)
T PF14583_consen   15 IDPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPG--------------   80 (386)
T ss_dssp             E-TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS---------------
T ss_pred             eCCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCC--------------
Confidence            356677666666543322     1223578899766554 4454  48888888886554433221              


Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEE--cCCCCeEEEEecCCc-----------
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAW--SPDNQRMVVVGEGRE-----------  208 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~~~~~~-----------  208 (683)
                      .......++++++.++-......|+-.|+.+++....+..+.  ..+-...|  +.|++.++.+.....           
T Consensus        81 ~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~--~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f  158 (386)
T PF14583_consen   81 DNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPD--DWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGF  158 (386)
T ss_dssp             B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--T--TEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHH
T ss_pred             CCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECCc--ccccccceeeCCCccEEEEEEEeehhccCccccHHH
Confidence            112245667777777655555688888999987655555543  44444555  445666554432111           


Q ss_pred             ---------eEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeC---CC-eEEEEcCCC-Cceeeecccc--c
Q psy15995        209 ---------RFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSE---DN-TIAVFEGPP-FKFKMTKQEH--S  272 (683)
Q Consensus       209 ---------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~-~i~iw~~~~-~~~~~~~~~~--~  272 (683)
                               ..+...+.++|+ ...+......+..+.|+|..+..|+.|-+   +. .-+||-+++ +.....+..+  .
T Consensus       159 ~e~~~a~p~~~i~~idl~tG~-~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~  237 (386)
T PF14583_consen  159 REFYEARPHCRIFTIDLKTGE-RKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEG  237 (386)
T ss_dssp             HHHHHC---EEEEEEETTT---EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TT
T ss_pred             HHHHhhCCCceEEEEECCCCc-eeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCC
Confidence                     112233333443 33334456678899999999875555433   22 135564322 2222222222  2


Q ss_pred             cCeEEEEECCCCCEEEEEc-----CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECC
Q psy15995        273 RFVQAVRYSPSGSHFASAG-----FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD  337 (683)
Q Consensus       273 ~~v~~~~~~~~~~~l~~~~-----~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  337 (683)
                      ..+..=-|.|||..+.--+     .+..|.-+|+.+++......    ......+.-++|+++++-=+.|
T Consensus       238 e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~----~p~~~H~~ss~Dg~L~vGDG~d  303 (386)
T PF14583_consen  238 ESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLME----MPWCSHFMSSPDGKLFVGDGGD  303 (386)
T ss_dssp             EEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEE----E-SEEEEEE-TTSSEEEEEE--
T ss_pred             cccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEe----CCceeeeEEcCCCCEEEecCCC
Confidence            3445556899998655422     23457777888876644332    2234566667888876654544

>KOG1832|consensus

Probab=98.55  E-value=7.8e-08  Score=94.59  Aligned_cols=221  Identities=14%  Similarity=0.199  Sum_probs=157.8

Q ss_pred             cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE
Q psy15995         76 AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY  155 (683)
Q Consensus        76 ~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  155 (683)
                      +..++|..|+..-+|++||-+.+.|+.|+..|.|+++++.+|........|.              ..++.+.-+.||..
T Consensus      1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~--------------SavT~vePs~dgs~ 1157 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQ--------------SAVTLVEPSVDGST 1157 (1516)
T ss_pred             ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccc--------------cccccccccCCcce
Confidence            3456678899999999999999999999999999999999998877776665              77888888889987


Q ss_pred             EEeecCCc--cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceee-eec---CC
Q psy15995        156 IASGDISG--KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGE-ISG---QS  229 (683)
Q Consensus       156 l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~  229 (683)
                      +++.+...  ...+|++..- .-....+    ..-.++.|+...+.-++++....  ..+|+.+++..+.+ +.+   ..
T Consensus      1158 ~Ltsss~S~PlsaLW~~~s~-~~~~Hsf----~ed~~vkFsn~~q~r~~gt~~d~--a~~YDvqT~~~l~tylt~~~~~~ 1230 (1516)
T KOG1832|consen 1158 QLTSSSSSSPLSALWDASST-GGPRHSF----DEDKAVKFSNSLQFRALGTEADD--ALLYDVQTCSPLQTYLTDTVTSS 1230 (1516)
T ss_pred             eeeeccccCchHHHhccccc-cCccccc----cccceeehhhhHHHHHhcccccc--eEEEecccCcHHHHhcCcchhhh
Confidence            76655433  4789998751 1112222    23467888877555555554433  68999999887766 332   23


Q ss_pred             cCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEe
Q psy15995        230 KPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSE  309 (683)
Q Consensus       230 ~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~  309 (683)
                      ..-++..|+|.+.. ++   .||  .+||.+..+.++.+...+.. ..-.|+|.|..++.-+     .|||+++.+.++.
T Consensus      1231 y~~n~a~FsP~D~L-Il---ndG--vLWDvR~~~aIh~FD~ft~~-~~G~FHP~g~eVIINS-----EIwD~RTF~lLh~ 1298 (1516)
T KOG1832|consen 1231 YSNNLAHFSPCDTL-IL---NDG--VLWDVRIPEAIHRFDQFTDY-GGGGFHPSGNEVIINS-----EIWDMRTFKLLHS 1298 (1516)
T ss_pred             hhccccccCCCcce-Ee---eCc--eeeeeccHHHHhhhhhheec-ccccccCCCceEEeec-----hhhhhHHHHHHhc
Confidence            33478899999974 32   344  57998887777777655532 2346999999888765     4899999888776


Q ss_pred             ccCCccccCeEEEEEccCCCEEEE
Q psy15995        310 LGNPAHKGGVYAVAWKPDGTQLLT  333 (683)
Q Consensus       310 ~~~~~~~~~i~~~~~~~~~~~l~~  333 (683)
                      ...    -.-..+.|+..|..++.
T Consensus      1299 VP~----Ldqc~VtFNstG~VmYa 1318 (1516)
T KOG1832|consen 1299 VPS----LDQCAVTFNSTGDVMYA 1318 (1516)
T ss_pred             Ccc----ccceEEEeccCccchhh
Confidence            632    23356778877775554

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.55  E-value=0.00037  Score=70.25  Aligned_cols=107  Identities=13%  Similarity=0.080  Sum_probs=67.1

Q ss_pred             CCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeE----------EEEEccCCCEEEEEECCCcEEEEECCCCceeeE
Q psy15995        284 GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVY----------AVAWKPDGTQLLTASGDKTCKLWDIETKSVVSE  353 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~----------~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  353 (683)
                      +..+++++.++.|+-.|..+|+.+......... .+.          .+++.  +..++.++.++.+.-.|.++++.+.+
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~-~~~~~~~~~~~~rg~av~--~~~v~v~t~dg~l~ALDa~TGk~~W~  145 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPD-DVIPVMCCDVVNRGVALY--DGKVFFGTLDARLVALDAKTGKVVWS  145 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeEecCCCCc-ccccccccccccccceEE--CCEEEEEcCCCEEEEEECCCCCEEee
Confidence            446777777889999999999988876532111 111          12222  34677888899999999999999877


Q ss_pred             EEecCcceeceEEEEe--cCCEEEEEec------CCcEEEEecCCCCc
Q psy15995        354 FIMGNQVEDQQVSCLW--QGDYLLTVSL------SGFISYLDVNNPST  393 (683)
Q Consensus       354 ~~~~~~~~~~~~~~~~--~~~~l~~~~~------~g~i~~~~~~~~~~  393 (683)
                      ...........+...|  .+..++++..      +|.+.-+|..+++.
T Consensus       146 ~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~  193 (527)
T TIGR03075       146 KKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKL  193 (527)
T ss_pred             cccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCce
Confidence            6543211111111111  3445666543      57888888887554

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.51  E-value=3.8e-05  Score=74.42  Aligned_cols=218  Identities=15%  Similarity=0.135  Sum_probs=117.6

Q ss_pred             CeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccc
Q psy15995         46 QPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      .+..++++|+|++++.+.+|.-.|+.....+..     ..+.-...+|++.++ +|+-...++|.|+.--+.+....++.
T Consensus        34 ~p~~ls~npngr~v~V~g~geY~iyt~~~~r~k-----~~G~g~~~vw~~~n~-yAv~~~~~~I~I~kn~~~~~~k~i~~  107 (443)
T PF04053_consen   34 YPQSLSHNPNGRFVLVCGDGEYEIYTALAWRNK-----AFGSGLSFVWSSRNR-YAVLESSSTIKIYKNFKNEVVKSIKL  107 (443)
T ss_dssp             --SEEEE-TTSSEEEEEETTEEEEEETTTTEEE-----EEEE-SEEEE-TSSE-EEEE-TTS-EEEEETTEE-TT-----
T ss_pred             CCeeEEECCCCCEEEEEcCCEEEEEEccCCccc-----ccCceeEEEEecCcc-EEEEECCCeEEEEEcCccccceEEcC
Confidence            467889999999999999999999984433332     233445678999665 55656688899974333333222222


Q ss_pred             ccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEec
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE  205 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  205 (683)
                      .               ..+..+..   |..|...+.+ .|.+||+++++.+......    +|..+.|++++++++..+.
T Consensus       108 ~---------------~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~----~vk~V~Ws~~g~~val~t~  164 (443)
T PF04053_consen  108 P---------------FSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVS----AVKYVIWSDDGELVALVTK  164 (443)
T ss_dssp             S---------------S-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS-----E-EEEEE-TTSSEEEEE-S
T ss_pred             C---------------cccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecC----CCcEEEEECCCCEEEEEeC
Confidence            1               11222222   7777766554 8999999999877766543    3899999999999999987


Q ss_pred             CCceEEEEEEccCC-----------CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccC
Q psy15995        206 GRERFGHVFMSETG-----------TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF  274 (683)
Q Consensus       206 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~  274 (683)
                      +.   +.+...+..           .....+..-...|.+..|..+   .++-.+.. .++-+-  .|+ ...+..-..+
T Consensus       165 ~~---i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d---~fiYtT~~-~lkYl~--~Ge-~~~i~~ld~~  234 (443)
T PF04053_consen  165 DS---IYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED---CFIYTTSN-HLKYLV--NGE-TGIIAHLDKP  234 (443)
T ss_dssp             -S---EEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT---EEEEE-TT-EEEEEE--TTE-EEEEEE-SS-
T ss_pred             Ce---EEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC---EEEEEcCC-eEEEEE--cCC-cceEEEcCCc
Confidence            65   344443322           123333333677888888877   24433333 555532  222 1222222456


Q ss_pred             eEEEEECCCCCEEEEEcCCCcEEEEeCC
Q psy15995        275 VQAVRYSPSGSHFASAGFDGKVFLYDGA  302 (683)
Q Consensus       275 v~~~~~~~~~~~l~~~~~dg~i~iw~~~  302 (683)
                      +.-+.+.++.+.+.....|+.+..+.+.
T Consensus       235 ~yllgy~~~~~~ly~~Dr~~~v~~~~ld  262 (443)
T PF04053_consen  235 LYLLGYLPKENRLYLIDRDGNVISYELD  262 (443)
T ss_dssp             -EEEEEETTTTEEEEE-TT--EEEEE--
T ss_pred             eEEEEEEccCCEEEEEECCCCEEEEEEC
Confidence            6777777877788888888888887664

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.50  E-value=3.4e-06  Score=81.33  Aligned_cols=145  Identities=14%  Similarity=0.178  Sum_probs=93.8

Q ss_pred             CCCeEEEeeCCCCCeEEEec--C--CeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEec-CCCC--EEEEeCCC
Q psy15995         44 RGQPIVLGGDPKGKNFLYTN--G--NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD-ISGK--VRIWDTVN  116 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~~--~--~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~-~dg~--i~iwd~~~  116 (683)
                      ++.-...+|||||+.|++..  +  -.|+++|+.+++..+ |..-.+.-+.-.|+|||++|+..+ ..|.  |.+.|.+.
T Consensus       237 ~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g  315 (425)
T COG0823         237 NGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEG  315 (425)
T ss_pred             CCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee-cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCC
Confidence            44556677999999999984  2  379999998887544 554444445778999999998654 4454  66666665


Q ss_pred             cccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC-cc--EEEEeccccceeeeccccccCCCeeEEEE
Q psy15995        117 KEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS-GK--VRIWDTVNKEHILKNEFHPIGGPIKDIAW  193 (683)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-~~--i~iwd~~~~~~~~~~~~~~~~~~i~~~~~  193 (683)
                      ... .++....              ..-..-.++|||++|+..+.. |.  |.+.|+.++......   ........-.|
T Consensus       316 ~~~-~riT~~~--------------~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~l---t~~~~~e~ps~  377 (425)
T COG0823         316 SQV-TRLTFSG--------------GGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRIL---TSTYLNESPSW  377 (425)
T ss_pred             Cce-eEeeccC--------------CCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEc---cccccCCCCCc
Confidence            543 2222221              112266799999999887643 44  666666665431111   12234456778


Q ss_pred             cCCCCeEEEEecCC
Q psy15995        194 SPDNQRMVVVGEGR  207 (683)
Q Consensus       194 s~~~~~l~~~~~~~  207 (683)
                      .++++.+...+...
T Consensus       378 ~~ng~~i~~~s~~~  391 (425)
T COG0823         378 APNGRMIMFSSGQG  391 (425)
T ss_pred             CCCCceEEEeccCC
Confidence            88998888776553

>KOG3621|consensus

Probab=98.48  E-value=2.7e-05  Score=75.59  Aligned_cols=313  Identities=12%  Similarity=0.181  Sum_probs=165.4

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCc
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISG  163 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~  163 (683)
                      |...|.--+++..+++++.|+.-|.+.+++-..++....-...             ....+....++++..++|.|+..|
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~-------------~~~~~~~~~vs~~e~lvAagt~~g   98 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEG-------------ATGITCVRSVSSVEYLVAAGTASG   98 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccC-------------ccceEEEEEecchhHhhhhhcCCc
Confidence            4556666677788999999999999999998777554332211             114566778899999999999999


Q ss_pred             cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCe
Q psy15995        164 KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPF  243 (683)
Q Consensus       164 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  243 (683)
                      .|.++-++......            -+-++|         .+                   ..|...|++++|++++. 
T Consensus        99 ~V~v~ql~~~~p~~------------~~~~t~---------~d-------------------~~~~~rVTal~Ws~~~~-  137 (726)
T KOG3621|consen   99 RVSVFQLNKELPRD------------LDYVTP---------CD-------------------KSHKCRVTALEWSKNGM-  137 (726)
T ss_pred             eEEeehhhccCCCc------------ceeecc---------cc-------------------ccCCceEEEEEeccccc-
Confidence            99999876632110            011111         11                   12666777777777777 


Q ss_pred             EEEEeeCCCeEEEEcCCCC----ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCcccc-C
Q psy15995        244 RIITGSEDNTIAVFEGPPF----KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKG-G  318 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~  318 (683)
                      .+++|...|.|..-.+...    -..+.+......|..+.+.. + +|++++.- .-.+++.+.+.. ..+.....++ .
T Consensus       138 k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q-~-~LLVStl~-r~~Lc~tE~eti-~QIG~k~R~~~~  213 (726)
T KOG3621|consen  138 KLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQ-S-YLLVSTLT-RCILCQTEAETI-TQIGKKPRKSLI  213 (726)
T ss_pred             EEeecCCCceEEEEEechhhhhccccceeeccCcceEEeeccc-c-eehHhhhh-hhheeecchhHH-HHhcCCCcCCcc
Confidence            3778877787777766551    01122223345666666543 2 34433322 334555554432 2222211222 1


Q ss_pred             eEEEEEccC----CCEEEEEECCCcEEEEECCC-CceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCc
Q psy15995        319 VYAVAWKPD----GTQLLTASGDKTCKLWDIET-KSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPST  393 (683)
Q Consensus       319 i~~~~~~~~----~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~  393 (683)
                      -...+|-|.    .+-++.++.-| .|+|..+- |..+++............-               .+.+-....+..
T Consensus       214 ~~GACF~~g~~~~q~~~IycaRPG-~RlWead~~G~V~~Thqfk~ala~~p~p---------------~i~~~s~esp~~  277 (726)
T KOG3621|consen  214 DFGACFFPGQCKAQKPQIYCARPG-LRLWEADFAGEVIKTHQFKDALARPPAP---------------EIPIRSLESPNQ  277 (726)
T ss_pred             ccceEEeeccccCCCceEEEecCC-CceEEeecceeEEEeeehhhhhccCCCC---------------cccCCCcCCccc
Confidence            345556553    34455555554 78897764 4444444322211100000               000000000000


Q ss_pred             -ceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeC
Q psy15995        394 -PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDL  472 (683)
Q Consensus       394 -~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~  472 (683)
                       ....-..|-+-......+ ++ .+.+-++-| |+|+|.++.....-.  .....|..++.+++.|+.-..|+.+++..+
T Consensus       278 ~~~~~~~q~ls~~k~~~l~-~~-~vLa~te~G-iyv~d~~~~~v~l~s--e~~~DI~dVs~~~neiFvL~~d~~l~~~sv  352 (726)
T KOG3621|consen  278 RSLPSGTQHLSLSKSSTLH-SD-RVLAWTEVG-IYVFDSNNSQVYLWS--EGGHDILDVSHCGNEIFVLNLDRGLKVESV  352 (726)
T ss_pred             cCCCCCccccccceeEEee-cc-eEEEeecce-EEEEEeccceEEEee--cCCCceeEEeecCceEEEEecCCceeEEEe
Confidence             000000111112222222 11 222222223 667776655443322  245678888888888888888888877776


Q ss_pred             CCC
Q psy15995        473 SSN  475 (683)
Q Consensus       473 ~~~  475 (683)
                      .+.
T Consensus       353 ~s~  355 (726)
T KOG3621|consen  353 ASR  355 (726)
T ss_pred             ehh
Confidence            554

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.47  E-value=0.00047  Score=67.17  Aligned_cols=209  Identities=14%  Similarity=0.098  Sum_probs=112.7

Q ss_pred             eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCe-----EEEEEccC
Q psy15995        253 TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGV-----YAVAWKPD  327 (683)
Q Consensus       253 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i-----~~~~~~~~  327 (683)
                      .|.+|+. .|+.+..+.-..+.+.++.|+.+.+ |++...||.++++|+.... ...+........|     ....+..+
T Consensus        62 ~I~iys~-sG~ll~~i~w~~~~iv~~~wt~~e~-LvvV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~~~~~~~~  138 (410)
T PF04841_consen   62 SIQIYSS-SGKLLSSIPWDSGRIVGMGWTDDEE-LVVVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLECRIFAIWFYKN  138 (410)
T ss_pred             EEEEECC-CCCEeEEEEECCCCEEEEEECCCCe-EEEEEcCCEEEEEeCCCce-eechhhhccccCcccccccccccCCC
Confidence            4888884 4455555544448899999998665 5566679999999986333 2222211122222     22233334


Q ss_pred             CCEEEEEECCCcEEEEECCCCc-eeeEEEe-cC------cceec--eEEEEecCCEEEEEecCCcEEEEecCCCCcceee
Q psy15995        328 GTQLLTASGDKTCKLWDIETKS-VVSEFIM-GN------QVEDQ--QVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRV  397 (683)
Q Consensus       328 ~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~-~~------~~~~~--~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~  397 (683)
                      |  ++.-..++.+.+.+-.... ....+.. ..      .....  ...+..+....+....++.+.+.+.... ..   
T Consensus       139 G--ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~-~~---  212 (410)
T PF04841_consen  139 G--IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSF-KQ---  212 (410)
T ss_pred             C--EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccc-cc---
Confidence            4  3333344554444322221 1111110 00      00000  0112223444444445555554443321 11   


Q ss_pred             eeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEe
Q psy15995        398 IKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVD  471 (683)
Q Consensus       398 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~  471 (683)
                      +. ..+++..+++||+++++|.-..+|.+.+.+..-.+...............+.|+|+--+.......+.+..
T Consensus       213 i~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~l~~~~~l~lvg  285 (410)
T PF04841_consen  213 ID-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVVLSWEDELLLVG  285 (410)
T ss_pred             cc-CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcEEEEeCCEEEEEC
Confidence            11 24689999999999999999999999998876665555554444556677888765433333344555544

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.45  E-value=0.001  Score=64.02  Aligned_cols=92  Identities=23%  Similarity=0.322  Sum_probs=72.7

Q ss_pred             EEEEEcCCCccCc--ceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCe
Q psy15995        545 VHIYELNNKSLSP--KAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL  622 (683)
Q Consensus       545 i~i~d~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~  622 (683)
                      -.+|++...++..  ...+.....+.+++++|+...|+.|+.||.|.+||...+..... .   ..-.++.++|+|+|.+
T Consensus       238 ~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-k---a~~~P~~iaWHp~gai  313 (545)
T PF11768_consen  238 SCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-K---AEFIPTLIAWHPDGAI  313 (545)
T ss_pred             EEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-e---ecccceEEEEcCCCcE
Confidence            4567776554432  22345788999999999999999999999999999977644322 1   4556889999999999


Q ss_pred             EEEeecCCcEEEEeCCCC
Q psy15995        623 VASGSLDTTIIIWSLASP  640 (683)
Q Consensus       623 l~~~~~d~~v~iw~~~~~  640 (683)
                      +++|++.|.+.+||+.-.
T Consensus       314 ~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  314 FVVGSEQGELQCFDMALS  331 (545)
T ss_pred             EEEEcCCceEEEEEeecC
Confidence            999999999999998543

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.45  E-value=3.7e-05  Score=74.32  Aligned_cols=207  Identities=13%  Similarity=0.114  Sum_probs=128.7

Q ss_pred             CeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEec---CC-CCEEEEeCCCcccccccccccCCCCcccceeeee
Q psy15995         65 NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD---IS-GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLS  140 (683)
Q Consensus        65 ~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~---~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (683)
                      ..+.+-|.+ +.....+..-...+..-+|+|+++.++-.+   .. ..+.++|+.+++........              
T Consensus       173 ~~l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~--------------  237 (425)
T COG0823         173 YELALGDYD-GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFN--------------  237 (425)
T ss_pred             ceEEEEccC-CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccC--------------
Confidence            356666655 544555666677788889999998876542   22 46999999998665544433              


Q ss_pred             ecceeeeEeeccceEEEee-cCCcc--EEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc
Q psy15995        141 LTSIRNILVLSIGFYIASG-DISGK--VRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE  217 (683)
Q Consensus       141 ~~~i~~~~~s~~~~~l~~~-~~d~~--i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~  217 (683)
                       ..-....|+|||++||.. ..||.  |.+.|+.++....   +....+.-..-.|+|||+.++..++..... .++..+
T Consensus       238 -g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~---Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p-~I~~~~  312 (425)
T COG0823         238 -GNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR---LTNGFGINTSPSWSPDGSKIVFTSDRGGRP-QIYLYD  312 (425)
T ss_pred             -CccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee---cccCCccccCccCCCCCCEEEEEeCCCCCc-ceEEEC
Confidence             233456799999977754 44555  6666777765222   333334445789999999999998765543 444443


Q ss_pred             -CCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCe--EEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC
Q psy15995        218 -TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNT--IAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF  292 (683)
Q Consensus       218 -~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  292 (683)
                       .+.....+......-..-.++|+|+++++....+|.  |.+.+..++.....+. +........+.+++..+...+.
T Consensus       313 ~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt-~~~~~e~ps~~~ng~~i~~~s~  389 (425)
T COG0823         313 LEGSQVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILT-STYLNESPSWAPNGRMIMFSSG  389 (425)
T ss_pred             CCCCceeEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcc-ccccCCCCCcCCCCceEEEecc
Confidence             233334444444443488899999975555544455  6666665555333222 3333445677888886665543

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.45  E-value=0.00076  Score=64.91  Aligned_cols=81  Identities=20%  Similarity=0.286  Sum_probs=67.3

Q ss_pred             ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCc
Q psy15995        270 EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       270 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      .....|.+++++|+.+.++.|+.||.|.+||...+..... .   ..-..+.++|+|+|..+++|+..|.+.+||+.-..
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-k---a~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALsp  332 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-K---AEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSP  332 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-e---ecccceEEEEcCCCcEEEEEcCCceEEEEEeecCc
Confidence            4677899999999999999999999999999876643332 2   44567899999999999999999999999998665


Q ss_pred             eeeEE
Q psy15995        350 VVSEF  354 (683)
Q Consensus       350 ~~~~~  354 (683)
                      ....+
T Consensus       333 i~~qL  337 (545)
T PF11768_consen  333 IKMQL  337 (545)
T ss_pred             cceee
Confidence            54444

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.41  E-value=0.00015  Score=63.98  Aligned_cols=202  Identities=12%  Similarity=0.184  Sum_probs=117.5

Q ss_pred             cccCcccceEEEEECCCCc-EEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEe
Q psy15995         80 IYTEHSCAVNVAKYSPSGF-YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIAS  158 (683)
Q Consensus        80 ~~~~h~~~v~~~~~s~d~~-~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  158 (683)
                      .+.+-...+..++|.|+.+ ++|+....+.|...+. +|+.+.++.....             .....+++..++.++++
T Consensus        16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~-------------~D~EgI~y~g~~~~vl~   81 (248)
T PF06977_consen   16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGF-------------GDYEGITYLGNGRYVLS   81 (248)
T ss_dssp             E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS--------------SSEEEEEE-STTEEEEE
T ss_pred             ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCC-------------CCceeEEEECCCEEEEE
Confidence            3556666799999999755 5566777888888886 4777777665542             56788899999998888


Q ss_pred             ecCCccEEEEeccccce------eeecc--cc-ccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccC---CCceee--
Q psy15995        159 GDISGKVRIWDTVNKEH------ILKNE--FH-PIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSET---GTSVGE--  224 (683)
Q Consensus       159 ~~~d~~i~iwd~~~~~~------~~~~~--~~-~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~--  224 (683)
                      --.++.+.+.++.....      .....  +. .....+..++|.|.++.++++.+....  .++.++.   ...+..  
T Consensus        82 ~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~--~l~~~~~~~~~~~~~~~~  159 (248)
T PF06977_consen   82 EERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPK--RLYEVNGFPGGFDLFVSD  159 (248)
T ss_dssp             ETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSE--EEEEEESTT-SS--EEEE
T ss_pred             EcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCCh--hhEEEccccCccceeecc
Confidence            87789999998843211      11111  11 234568999999998888888766543  3444432   111111  


Q ss_pred             ------eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccc---------cCeEEEEECCCCCEEEE
Q psy15995        225 ------ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS---------RFVQAVRYSPSGSHFAS  289 (683)
Q Consensus       225 ------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~  289 (683)
                            .......+..+.++|....+++.+..+..+..+| .+++.+..+.-..         ...-.++|.++|++.+ 
T Consensus       160 ~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYI-  237 (248)
T PF06977_consen  160 DQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYI-  237 (248)
T ss_dssp             -HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEE-
T ss_pred             ccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEE-
Confidence                  1223456889999999888888899999999999 5666554432111         3467899999986444 


Q ss_pred             EcCCCcEEEE
Q psy15995        290 AGFDGKVFLY  299 (683)
Q Consensus       290 ~~~dg~i~iw  299 (683)
                      .+.-+..+++
T Consensus       238 vsEpNlfy~f  247 (248)
T PF06977_consen  238 VSEPNLFYRF  247 (248)
T ss_dssp             EETTTEEEEE
T ss_pred             EcCCceEEEe
Confidence            4444544443

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG3621|consensus

Probab=98.39  E-value=5.6e-05  Score=73.52  Aligned_cols=147  Identities=14%  Similarity=0.046  Sum_probs=104.0

Q ss_pred             cccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcc
Q psy15995        315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTP  394 (683)
Q Consensus       315 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~  394 (683)
                      +...+.--+++..+++++.|+..|.+.+|+-..++..................+++..++++|+..|.|.++.+.....+
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~  111 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR  111 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence            44556666677789999999999999999988877655444344455556667778889999999999999988764332


Q ss_pred             eeee-----eeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcce---eccCCCCcceeEEEEeCCeEEEE
Q psy15995        395 IRVI-----KGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDR---VQGAGHGNQINGMKATGELLYTC  461 (683)
Q Consensus       395 ~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~---~~~~~~~~~v~~~~~~~~~l~~~  461 (683)
                      -..+     +.|...|++++|++++..+++|...|.|..-.+.......   .........|..+.....+|+.+
T Consensus       112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q~~LLVS  186 (726)
T KOG3621|consen  112 DLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQSYLLVS  186 (726)
T ss_pred             cceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecccceehHh
Confidence            2222     2367889999999999999999999999998887721100   00122445666666664444433

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.37  E-value=0.00046  Score=63.93  Aligned_cols=275  Identities=14%  Similarity=0.128  Sum_probs=129.9

Q ss_pred             cCCCCCCceeecCCCCCCceeeeccc-ceeecCCCcccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCc
Q psy15995          7 PRTQRGQPIVLGGDPKGKNFLYTNGN-KYIFATLPRTQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEH   84 (683)
Q Consensus         7 ~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h   84 (683)
                      +|+++|+.++..++-.|..-++...+ ......++...........++|+.+.++|. .+..+.-.|+++.+....+.-.
T Consensus        42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p  121 (386)
T PF14583_consen   42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVP  121 (386)
T ss_dssp             -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--
T ss_pred             CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECC
Confidence            68999999999888888887777444 334555555432222234468999999887 5669999999999876666666


Q ss_pred             ccceEEEEE--CCCCcEEEEec---CCC-------------------CEEEEeCCCcccccccccccCCCCcccceeeee
Q psy15995         85 SCAVNVAKY--SPSGFYIASGD---ISG-------------------KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLS  140 (683)
Q Consensus        85 ~~~v~~~~~--s~d~~~las~~---~dg-------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (683)
                      ...+-...|  +.|++.++-.-   .|.                   .|.--|+.+|+....+               ..
T Consensus       122 ~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~---------------~~  186 (386)
T PF14583_consen  122 DDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVF---------------ED  186 (386)
T ss_dssp             TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEE---------------EE
T ss_pred             cccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEE---------------ec
Confidence            666655555  34677765432   111                   1333344443321111               12


Q ss_pred             ecceeeeEeeccceEEEeecCCc-----cEEEEeccc-cceeeeccccccCCCeeEEEEcCCCCeEEEEec---CCceEE
Q psy15995        141 LTSIRNILVLSIGFYIASGDISG-----KVRIWDTVN-KEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE---GRERFG  211 (683)
Q Consensus       141 ~~~i~~~~~s~~~~~l~~~~~d~-----~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---~~~~~~  211 (683)
                      ...+..+.|+|....++.-+..|     .-|||-+.+ +....+.........+..=-|.|||..+...+.   +.+..+
T Consensus       187 ~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i  266 (386)
T PF14583_consen  187 TDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWI  266 (386)
T ss_dssp             SS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEE
T ss_pred             CccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEE
Confidence            25567888999665555433322     136665543 222222222223355666779999998887653   223334


Q ss_pred             EEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEe-eCCC----------------eEEEEcCCCCceeee-------
Q psy15995        212 HVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITG-SEDN----------------TIAVFEGPPFKFKMT-------  267 (683)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~----------------~i~iw~~~~~~~~~~-------  267 (683)
                      .-++.++++....  ........+.-+++++  |++| +.|.                -|.+++.+.++....       
T Consensus       267 ~~~d~~t~~~~~~--~~~p~~~H~~ss~Dg~--L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw  342 (386)
T PF14583_consen  267 AGYDPDTGERRRL--MEMPWCSHFMSSPDGK--LFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSW  342 (386)
T ss_dssp             EEE-TTT--EEEE--EEE-SEEEEEE-TTSS--EEEEEE-------------------EEEEEETTTTEEEEEEE-----
T ss_pred             EeeCCCCCCceEE--EeCCceeeeEEcCCCC--EEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcc
Confidence            4455555544322  1122344556677887  4433 2221                455677666553211       


Q ss_pred             --cccccc-CeEEEEECCCCCEEE-EEcCCCcEEEEe
Q psy15995        268 --KQEHSR-FVQAVRYSPSGSHFA-SAGFDGKVFLYD  300 (683)
Q Consensus       268 --~~~~~~-~v~~~~~~~~~~~l~-~~~~dg~i~iw~  300 (683)
                        +.++.. .=-...|+|||++++ ++...|...||-
T Consensus       343 ~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~  379 (386)
T PF14583_consen  343 KVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYL  379 (386)
T ss_dssp             --BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEE
T ss_pred             eeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEE
Confidence              111111 123578999999665 555577666663

>KOG2066|consensus

Probab=98.35  E-value=4.2e-05  Score=75.45  Aligned_cols=184  Identities=21%  Similarity=0.203  Sum_probs=124.1

Q ss_pred             ccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCcc
Q psy15995         85 SCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGK  164 (683)
Q Consensus        85 ~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~  164 (683)
                      .+.++|++++  ++++|.|+.+|.|++.+.+..-  .+...+.               ..     ..+|.++++|+.||+
T Consensus        39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~~~--~~~~~~s---------------~~-----~~~Gey~asCS~DGk   94 (846)
T KOG2066|consen   39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQGNP--KTNFDHS---------------SS-----ILEGEYVASCSDDGK   94 (846)
T ss_pred             hhHHHHHHhh--cceeeeccccceEEEEecCCcc--ccccccc---------------cc-----ccCCceEEEecCCCc
Confidence            4567777766  5789999999999999976542  1111111               01     457899999999999


Q ss_pred             EEEEeccccceeeeccccccCCCeeEEEEcCC-----CCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeec
Q psy15995        165 VRIWDTVNKEHILKNEFHPIGGPIKDIAWSPD-----NQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKP  239 (683)
Q Consensus       165 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  239 (683)
                      |.|-.+-+.+......+.   .++.+++++||     .+.+++++..+ ....-..|-..+.-..+....++|.++.|..
T Consensus        95 v~I~sl~~~~~~~~~df~---rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~g  170 (846)
T KOG2066|consen   95 VVIGSLFTDDEITQYDFK---RPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWRG  170 (846)
T ss_pred             EEEeeccCCccceeEecC---CcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEecC
Confidence            999999888776666655   78999999998     34555555442 2222222222233335777889999999987


Q ss_pred             CCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCe------EEEEECCCCCEEEEEcCCCcEEEEeCC
Q psy15995        240 SRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFV------QAVRYSPSGSHFASAGFDGKVFLYDGA  302 (683)
Q Consensus       240 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v------~~~~~~~~~~~l~~~~~dg~i~iw~~~  302 (683)
                      +   +++-+ .|--|++||..+.+.+..++.....+      ..+.|.++.+ |+.|= ..+|++..++
T Consensus       171 ~---lIAWa-nd~Gv~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~-LVIGW-~d~v~i~~I~  233 (846)
T KOG2066|consen  171 N---LIAWA-NDDGVKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDR-LVIGW-GDSVKICSIK  233 (846)
T ss_pred             c---EEEEe-cCCCcEEEeccccceeeccCCCCCCCCcccCCCceEecCCCe-EEEec-CCeEEEEEEe
Confidence            6   35544 45559999999888877765443333      3566766654 55454 3468888777

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.34  E-value=0.0019  Score=62.71  Aligned_cols=270  Identities=17%  Similarity=0.118  Sum_probs=175.4

Q ss_pred             EEEEeCCCCcccccccCcccceEEEEECCCCcEEEEec-CCCCEEEEeCCCcccccccccccCCCCcccceeeeeeccee
Q psy15995         67 VIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD-ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIR  145 (683)
Q Consensus        67 i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  145 (683)
                      +.+++..+.+....+.-+. ....+++.+++..+.... ....+..-+.............              .....
T Consensus        13 ~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g--------------~~~p~   77 (381)
T COG3391          13 VSVINTGTNKVTAAISLGR-GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVG--------------GVYPA   77 (381)
T ss_pred             eEEEeecccEEEEEeecCC-CCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCC--------------Ccccc
Confidence            5555555554444333222 556778888885554433 2223444443311100000000              03345


Q ss_pred             eeEeeccceEE-EeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecC-CceEEEEEEccCCCcee
Q psy15995        146 NILVLSIGFYI-ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEG-RERFGHVFMSETGTSVG  223 (683)
Q Consensus       146 ~~~~s~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~  223 (683)
                      .+++++++..+ +....++.|.+.|..+.+........   .....++++|+++.+.++... ....+.+.+..+++...
T Consensus        78 ~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG---~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~  154 (381)
T COG3391          78 GVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVG---LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTA  154 (381)
T ss_pred             ceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeec---cCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEE
Confidence            67888888744 44555689999997776544333322   367889999999999998876 35567788888888777


Q ss_pred             eeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceee-e---ccccccCeEEEEECCCCCEEEEEcCC---CcE
Q psy15995        224 EISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM-T---KQEHSRFVQAVRYSPSGSHFASAGFD---GKV  296 (683)
Q Consensus       224 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-~---~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i  296 (683)
                      .......+ ..+++.|++...+++-..++.+.+.|........ .   ...-......+.++|+|+.+.+....   +.+
T Consensus       155 ~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v  233 (381)
T COG3391         155 TIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNV  233 (381)
T ss_pred             EEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceE
Confidence            75544444 8999999999766777789999999976665543 1   11223345678999999966665443   589


Q ss_pred             EEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC-CCcEEEEECCCCceeeEEEe
Q psy15995        297 FLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG-DKTCKLWDIETKSVVSEFIM  356 (683)
Q Consensus       297 ~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~  356 (683)
                      ...|..++............ ....+...|+++.+.+... .+.+.+-|..+.........
T Consensus       234 ~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~  293 (381)
T COG3391         234 LKIDTATGNVTATDLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPT  293 (381)
T ss_pred             EEEeCCCceEEEeccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecc
Confidence            99999888877663221222 5678899999999888844 47889999888777665543

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.29  E-value=0.00017  Score=69.97  Aligned_cols=225  Identities=15%  Similarity=0.230  Sum_probs=113.7

Q ss_pred             cCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc
Q psy15995        184 IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK  263 (683)
Q Consensus       184 ~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  263 (683)
                      ....+..+.++|+|+.+++++++.   ..++.....+.     ...+.-....|.+.+.  +++-...+.|.++.--..+
T Consensus        31 ~~~~p~~ls~npngr~v~V~g~ge---Y~iyt~~~~r~-----k~~G~g~~~vw~~~n~--yAv~~~~~~I~I~kn~~~~  100 (443)
T PF04053_consen   31 CEIYPQSLSHNPNGRFVLVCGDGE---YEIYTALAWRN-----KAFGSGLSFVWSSRNR--YAVLESSSTIKIYKNFKNE  100 (443)
T ss_dssp             -SS--SEEEE-TTSSEEEEEETTE---EEEEETTTTEE-----EEEEE-SEEEE-TSSE--EEEE-TTS-EEEEETTEE-
T ss_pred             CCcCCeeEEECCCCCEEEEEcCCE---EEEEEccCCcc-----cccCceeEEEEecCcc--EEEEECCCeEEEEEcCccc
Confidence            335578999999999999977663   33333111111     1123445678888664  6666668889996322222


Q ss_pred             eeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEE
Q psy15995        264 FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLW  343 (683)
Q Consensus       264 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw  343 (683)
                      ....++.. ..+..+-.   |..|+..+ ++.|.+||+++++.+..+..    .+|..+.|++++++++..+.+ .+.++
T Consensus       101 ~~k~i~~~-~~~~~If~---G~LL~~~~-~~~i~~yDw~~~~~i~~i~v----~~vk~V~Ws~~g~~val~t~~-~i~il  170 (443)
T PF04053_consen  101 VVKSIKLP-FSVEKIFG---GNLLGVKS-SDFICFYDWETGKLIRRIDV----SAVKYVIWSDDGELVALVTKD-SIYIL  170 (443)
T ss_dssp             TT-----S-S-EEEEE----SSSEEEEE-TTEEEEE-TTT--EEEEESS-----E-EEEEE-TTSSEEEEE-S--SEEEE
T ss_pred             cceEEcCC-cccceEEc---CcEEEEEC-CCCEEEEEhhHcceeeEEec----CCCcEEEEECCCCEEEEEeCC-eEEEE
Confidence            21122211 12333333   77777666 45899999999999999964    248999999999999998865 68887


Q ss_pred             ECCCCc--------eeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCC
Q psy15995        344 DIETKS--------VVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRG  415 (683)
Q Consensus       344 d~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  415 (683)
                      +.....        ....+..-+......-+..+.++.++..+.+ .++.+  ..+.  ...+..-..++.=+.+.|..+
T Consensus       171 ~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d~fiYtT~~-~lkYl--~~Ge--~~~i~~ld~~~yllgy~~~~~  245 (443)
T PF04053_consen  171 KYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVEDCFIYTTSN-HLKYL--VNGE--TGIIAHLDKPLYLLGYLPKEN  245 (443)
T ss_dssp             EE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETTEEEEE-TT-EEEEE--ETTE--EEEEEE-SS--EEEEEETTTT
T ss_pred             EecchhcccccccCchhceEEEEEecceeEEEEEEcCEEEEEcCC-eEEEE--EcCC--cceEEEcCCceEEEEEEccCC
Confidence            755430        0001111111122233334455544444444 55552  2211  223333355677777888778


Q ss_pred             EEEEEeCCCcEEEEcCCC
Q psy15995        416 TVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       416 ~l~~~~~dg~i~~w~~~~  433 (683)
                      .++....|+.+..+.+..
T Consensus       246 ~ly~~Dr~~~v~~~~ld~  263 (443)
T PF04053_consen  246 RLYLIDRDGNVISYELDL  263 (443)
T ss_dssp             EEEEE-TT--EEEEE--H
T ss_pred             EEEEEECCCCEEEEEECH
Confidence            888888999888887654

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.27  E-value=0.0026  Score=61.64  Aligned_cols=267  Identities=15%  Similarity=0.138  Sum_probs=172.2

Q ss_pred             EEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeE
Q psy15995        165 VRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFR  244 (683)
Q Consensus       165 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  244 (683)
                      +.+++..+.+........   .....+...|++..+.+...... .+....................-..++.++.++..
T Consensus        13 ~~v~~~~~~~~~~~~~~~---~~~~~v~~~~~g~~~~v~~~~~~-~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~v   88 (381)
T COG3391          13 VSVINTGTNKVTAAISLG---RGPGGVAVNPDGTQVYVANSGSN-DVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKV   88 (381)
T ss_pred             eEEEeecccEEEEEeecC---CCCceeEEcCccCEEEEEeecCc-eeeecccccceeeeeccCCCccccceeeCCCCCeE
Confidence            455555444333222222   25667888899877777665543 12222222111111111111345577888888876


Q ss_pred             EEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC---CCcEEEEeCCCCeeEEeccCCccccCeEE
Q psy15995        245 IITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF---DGKVFLYDGASADLVSELGNPAHKGGVYA  321 (683)
Q Consensus       245 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~i~~  321 (683)
                      .+....++.|.+.|..+.+.......-. ....++++|+++.+.++..   ++.+.+.|..+++.......  -..+ ..
T Consensus        89 yv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~v--G~~P-~~  164 (381)
T COG3391          89 YVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPV--GNTP-TG  164 (381)
T ss_pred             EEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEec--CCCc-ce
Confidence            7777778999999977777666554322 6778999999987777665   68999999999988888542  2234 89


Q ss_pred             EEEccCCCEEEEEE-CCCcEEEEECCCCceeeEEE----ecCcceeceEEEEecCCEEEEEecC---CcEEEEecCCCCc
Q psy15995        322 VAWKPDGTQLLTAS-GDKTCKLWDIETKSVVSEFI----MGNQVEDQQVSCLWQGDYLLTVSLS---GFISYLDVNNPST  393 (683)
Q Consensus       322 ~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~---g~i~~~~~~~~~~  393 (683)
                      +++.|+++.++... .++.+.+.|........ -.    .........+.+.+++.++.+....   +.+...|......
T Consensus       165 ~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v  243 (381)
T COG3391         165 VAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNV  243 (381)
T ss_pred             EEECCCCCeEEEEecCCCeEEEEeCCCcceec-cccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceE
Confidence            99999999777665 67899999977766553 11    2233455677788888877766655   4888888776433


Q ss_pred             ceeeeeeccccEEEEEEeCCCCEEEEEeC-CCcEEEEcCCCCCcceec
Q psy15995        394 PIRVIKGHNKPITALALSPDRGTVFTGSH-DGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       394 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~w~~~~~~~~~~~  440 (683)
                      ..............+..+|+|+.+.+... .+.+.+-|..+.......
T Consensus       244 ~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~  291 (381)
T COG3391         244 TATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTG  291 (381)
T ss_pred             EEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeee
Confidence            22211111114556889999999988744 478888888876665544

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.26  E-value=0.00033  Score=60.48  Aligned_cols=208  Identities=12%  Similarity=0.071  Sum_probs=131.3

Q ss_pred             EeeCCCCCeEEEecC------CeEEEEeCCCC-cccccccCcccceEEEEECCCCcEEEEecCCCCEEEE-eCCCccccc
Q psy15995         50 LGGDPKGKNFLYTNG------NSVIIRNIENP-AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIW-DTVNKEHIL  121 (683)
Q Consensus        50 ~~~s~~~~~l~~~~~------~~i~v~~~~~~-~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iw-d~~~~~~~~  121 (683)
                      =.|||||++|..+.+      |.|-|||...+ +.+..+..|.-.-..+.+.+||+.|+.+  +|-|..- |....++  
T Consensus       119 Gvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvva--nGGIethpdfgR~~l--  194 (366)
T COG3490         119 GVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVA--NGGIETHPDFGRTEL--  194 (366)
T ss_pred             cccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEe--CCceecccccCcccc--
Confidence            348999999988742      68999998754 4566688898888899999999999886  3446655 3222110  


Q ss_pred             ccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeecccc--ccCCCeeEEEEcCCCCe
Q psy15995        122 KNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFH--PIGGPIKDIAWSPDNQR  199 (683)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~  199 (683)
                      .+                                   -+..-++.+-|..+|+.+.+..++  .+.-.|..++..+||+.
T Consensus       195 Nl-----------------------------------dsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtv  239 (366)
T COG3490         195 NL-----------------------------------DSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTV  239 (366)
T ss_pred             ch-----------------------------------hhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcE
Confidence            00                                   011234556666667766666666  45567899999999987


Q ss_pred             EEEEecCCc---eEEEEEEccCCCceeeeec-------CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc
Q psy15995        200 MVVVGEGRE---RFGHVFMSETGTSVGEISG-------QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ  269 (683)
Q Consensus       200 l~~~~~~~~---~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~  269 (683)
                      .+.+-..+.   ..-.+-....++.+.-+.-       ....|-+++.+.+.....+++-..+...+||..++..+..-.
T Consensus       240 wfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~  319 (366)
T COG3490         240 WFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAA  319 (366)
T ss_pred             EEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEeccc
Confidence            776643221   1112222233444433322       234567888887777666677677788999999998765433


Q ss_pred             ccccCeEEEEECCCCCEEEEEcCCCcEEEEe
Q psy15995        270 EHSRFVQAVRYSPSGSHFASAGFDGKVFLYD  300 (683)
Q Consensus       270 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  300 (683)
                      -.  ....++  +...-+++.+.+|.+.+++
T Consensus       320 l~--daaGva--~~~~gf~vssg~G~~~~~s  346 (366)
T COG3490         320 LP--DAAGVA--AAKGGFAVSSGQGRIIFYS  346 (366)
T ss_pred             cc--ccccce--eccCceEEecCCceEEecc
Confidence            11  122222  3333466666688888874

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.25  E-value=0.0013  Score=65.40  Aligned_cols=246  Identities=13%  Similarity=0.092  Sum_probs=127.9

Q ss_pred             EEeeCCCCCeEEEec--CC----eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecC-----------CCCEEE
Q psy15995         49 VLGGDPKGKNFLYTN--GN----SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDI-----------SGKVRI  111 (683)
Q Consensus        49 ~~~~s~~~~~l~~~~--~~----~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~-----------dg~i~i  111 (683)
                      ..++||||+++|++.  +|    .+++.|+++++.+..-- ....-..+.|.+|++.++-...           ...|..
T Consensus       128 ~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i-~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~  206 (414)
T PF02897_consen  128 GFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGI-ENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYR  206 (414)
T ss_dssp             EEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEE-EEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEE
T ss_pred             eeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcc-cccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEE
Confidence            567899999999982  33    69999999997654311 1112234999999887754432           223888


Q ss_pred             EeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC---C-ccEEEEecccc---ceeeecccccc
Q psy15995        112 WDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI---S-GKVRIWDTVNK---EHILKNEFHPI  184 (683)
Q Consensus       112 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---d-~~i~iwd~~~~---~~~~~~~~~~~  184 (683)
                      |++.+...--.+-+......          .....+..++|+++|+....   + ..+.+.++..+   ...........
T Consensus       207 ~~~gt~~~~d~lvfe~~~~~----------~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~  276 (414)
T PF02897_consen  207 HKLGTPQSEDELVFEEPDEP----------FWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPRE  276 (414)
T ss_dssp             EETTS-GGG-EEEEC-TTCT----------TSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESS
T ss_pred             EECCCChHhCeeEEeecCCC----------cEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCC
Confidence            88877643311211111100          11456788999998875332   2 45788888764   11111212222


Q ss_pred             CCCeeEEEEcCCCCeEEEEecCCceEEEEEEc--cCCCc---eeeeecCCcCeEEEEeecCCCeEEEEeeCCC--eEEEE
Q psy15995        185 GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMS--ETGTS---VGEISGQSKPINSCDFKPSRPFRIITGSEDN--TIAVF  257 (683)
Q Consensus       185 ~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~i~iw  257 (683)
                      .+....+...  +..+.+.+........+...  +....   ...+..+...+.-..+...+.++++....++  .|+++
T Consensus       277 ~~~~~~v~~~--~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~  354 (414)
T PF02897_consen  277 DGVEYYVDHH--GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVY  354 (414)
T ss_dssp             SS-EEEEEEE--TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred             CceEEEEEcc--CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEE
Confidence            2333333333  44444444332222334333  33332   2356667665555555555666666666665  46778


Q ss_pred             cCCCCceeeec-cccccCeEEEEECCCCCEEEEE-c-C--CCcEEEEeCCCCeeE
Q psy15995        258 EGPPFKFKMTK-QEHSRFVQAVRYSPSGSHFASA-G-F--DGKVFLYDGASADLV  307 (683)
Q Consensus       258 ~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~-~-~--dg~i~iw~~~~~~~~  307 (683)
                      +...+.....+ ....+.|..+...++++.+... + .  -+++..||+.+++..
T Consensus       355 ~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~  409 (414)
T PF02897_consen  355 DLDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT  409 (414)
T ss_dssp             ETT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred             ECCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence            88733333333 2233445666666666643322 2 1  357888888887654

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.23  E-value=0.0012  Score=65.51  Aligned_cols=251  Identities=13%  Similarity=0.060  Sum_probs=134.1

Q ss_pred             ccceEEEEECCCCcEEEEe-cCCC----CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEee
Q psy15995         85 SCAVNVAKYSPSGFYIASG-DISG----KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASG  159 (683)
Q Consensus        85 ~~~v~~~~~s~d~~~las~-~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  159 (683)
                      ...+....+||||+++|.+ +..|    .|++.|+.+++.+...-..               .....+.|.+|++.|+..
T Consensus       123 ~~~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~---------------~~~~~~~W~~d~~~~~y~  187 (414)
T PF02897_consen  123 YVSLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN---------------PKFSSVSWSDDGKGFFYT  187 (414)
T ss_dssp             -EEEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE---------------EESEEEEECTTSSEEEEE
T ss_pred             eEEeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc---------------cccceEEEeCCCCEEEEE
Confidence            3455578999999999854 4444    4999999999654321111               222348999998766554


Q ss_pred             cC-----------CccEEEEeccccceeeeccccccCC--CeeEEEEcCCCCeEEEEecCCce--EEEEEEccCC----C
Q psy15995        160 DI-----------SGKVRIWDTVNKEHILKNEFHPIGG--PIKDIAWSPDNQRMVVVGEGRER--FGHVFMSETG----T  220 (683)
Q Consensus       160 ~~-----------d~~i~iwd~~~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~~~~~--~~~~~~~~~~----~  220 (683)
                      ..           ...|..|.+.+...-....+.....  ....+..++|++++++.......  .+.+.+...+    .
T Consensus       188 ~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~  267 (414)
T PF02897_consen  188 RFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDA  267 (414)
T ss_dssp             ECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-
T ss_pred             EeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcC
Confidence            32           3347888887654321122222222  26788999999998876554433  3444444443    2


Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEe--eCCCeEEEEcCCCCce---eeeccccccCeEEEEECCCCCEEEEE-cCCC
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITG--SEDNTIAVFEGPPFKF---KMTKQEHSRFVQAVRYSPSGSHFASA-GFDG  294 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~--~~d~~i~iw~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg  294 (683)
                      ....+..+...+....-+..+.+.+.+-  ..++.|...++.....   ...+..+...+.-..+...+++|+.. ..++
T Consensus       268 ~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~  347 (414)
T PF02897_consen  268 KPKLLSPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENG  347 (414)
T ss_dssp             SEEEEEESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETT
T ss_pred             CcEEEeCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECC
Confidence            3444555555554444333554434442  2345666666665542   32444555543333344445555544 3343


Q ss_pred             --cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEE-EC---CCcEEEEECCCCcee
Q psy15995        295 --KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA-SG---DKTCKLWDIETKSVV  351 (683)
Q Consensus       295 --~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~---dg~i~iwd~~~~~~~  351 (683)
                        .|+++++..+.....+..+ ..+.|..+...++++.+... +.   -+++..||+.+++..
T Consensus       348 ~~~l~v~~~~~~~~~~~~~~p-~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~  409 (414)
T PF02897_consen  348 SSRLRVYDLDDGKESREIPLP-EAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT  409 (414)
T ss_dssp             EEEEEEEETT-TEEEEEEESS-SSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred             ccEEEEEECCCCcEEeeecCC-cceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence              6889998844554554443 33456666655655544332 22   246888888887753

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.22  E-value=0.0019  Score=62.96  Aligned_cols=106  Identities=8%  Similarity=0.089  Sum_probs=64.9

Q ss_pred             CCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccc
Q psy15995        522 YEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHN  601 (683)
Q Consensus       522 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~  601 (683)
                      .++..+++||+++++|.-..+|.+.+.+.+-.+...+...+.......+.|.-+...++.-  ...+.+....       
T Consensus       217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~l~~--~~~l~lvg~~-------  287 (410)
T PF04841_consen  217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVVLSW--EDELLLVGPD-------  287 (410)
T ss_pred             CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcEEEEe--CCEEEEECCC-------
Confidence            4678999999999999999999999988766665555555545566777776543333322  2233333311       


Q ss_pred             cceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEe
Q psy15995        602 KEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIII  646 (683)
Q Consensus       602 ~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~  646 (683)
                            ..   .+.|.-++..++..-.|| +||..-.+-+.+.+.
T Consensus       288 ------~~---~~~~~~~~~~~l~~E~DG-~riit~~~~~~l~~V  322 (410)
T PF04841_consen  288 ------GD---SISFWYDGPVILVSEIDG-VRIITSTSHEFLQRV  322 (410)
T ss_pred             ------CC---ceEEeccCceEEeccCCc-eEEEeCCceEEEEEC
Confidence                  11   123444444455555566 788776655555444

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.19  E-value=0.00061  Score=64.76  Aligned_cols=214  Identities=15%  Similarity=0.170  Sum_probs=123.5

Q ss_pred             cEEEEecCCCCcceeeee-eccccEEEEEE---eCC----CCEEEEEeC----------CCcEEEEcCCCC-----Ccce
Q psy15995        382 FISYLDVNNPSTPIRVIK-GHNKPITALAL---SPD----RGTVFTGSH----------DGFITRWNAKTG-----ENDR  438 (683)
Q Consensus       382 ~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~---~~~----~~~l~~~~~----------dg~i~~w~~~~~-----~~~~  438 (683)
                      .++++|..+.. .+..+. .....+.+++.   ..+    ..++++|..          .|.|.++++...     +...
T Consensus         3 ~i~l~d~~~~~-~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~   81 (321)
T PF03178_consen    3 SIRLVDPTTFE-VLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL   81 (321)
T ss_dssp             EEEEEETTTSS-EEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred             EEEEEeCCCCe-EEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence            46666665533 222222 12334555443   322    467776643          288999999884     3333


Q ss_pred             eccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCc-ccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeee
Q psy15995        439 VQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNA-YSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSS  517 (683)
Q Consensus       439 ~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (683)
                      .......++|.++...+++ +.++.++.+.+|++.... +                                   .+...
T Consensus        82 i~~~~~~g~V~ai~~~~~~-lv~~~g~~l~v~~l~~~~~l-----------------------------------~~~~~  125 (321)
T PF03178_consen   82 IHSTEVKGPVTAICSFNGR-LVVAVGNKLYVYDLDNSKTL-----------------------------------LKKAF  125 (321)
T ss_dssp             EEEEEESS-EEEEEEETTE-EEEEETTEEEEEEEETTSSE-----------------------------------EEEEE
T ss_pred             EEEEeecCcceEhhhhCCE-EEEeecCEEEEEEccCcccc-----------------------------------hhhhe
Confidence            3334567889999988777 444457999999988764 1                                   11111


Q ss_pred             ecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCC--CccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCC
Q psy15995        518 LPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNN--KSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPD  595 (683)
Q Consensus       518 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~  595 (683)
                      ...  +....++...+.++++|.....+.++.++.  .++.....-.....++++.|-+|++.+++++.+|.+.++..+.
T Consensus       126 ~~~--~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~  203 (321)
T PF03178_consen  126 YDS--PFYITSLSVFKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNP  203 (321)
T ss_dssp             E-B--SSSEEEEEEETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-S
T ss_pred             ecc--eEEEEEEeccccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECC
Confidence            222  224444444466999999888888886554  2233222222455688999987767999999999999998873


Q ss_pred             C---------ccccccceeeecccEEEE---EecCC--CC------eEEEeecCCcEEEE
Q psy15995        596 F---------ELAHNKEWGFHSAKVNCV---AWSPD--SA------LVASGSLDTTIIIW  635 (683)
Q Consensus       596 ~---------~~~~~~~~~~h~~~v~~~---~~s~d--~~------~l~~~~~d~~v~iw  635 (683)
                      .         ++.....+. ....|+++   ++.|.  +.      .++.++.+|.|...
T Consensus       204 ~~~~~~~~~~~L~~~~~f~-lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  204 EIPNSRDGDPKLERISSFH-LGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             S-SSTTTTTTBEEEEEEEE--SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             CCcccccccccceeEEEEE-CCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence            1         222222332 34567877   55552  22      37778889988743

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.18  E-value=0.0017  Score=61.80  Aligned_cols=218  Identities=10%  Similarity=0.121  Sum_probs=135.9

Q ss_pred             CcEEEEECCCCceeeEEEecCcceeceEEEEe-------cCCEEEEEec---------C-CcEEEEecCCC-C--cceee
Q psy15995        338 KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW-------QGDYLLTVSL---------S-GFISYLDVNNP-S--TPIRV  397 (683)
Q Consensus       338 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~---------~-g~i~~~~~~~~-~--~~~~~  397 (683)
                      ..|++.|..+.+.+..+..........+....       ...++++|+.         . |.+.++++... .  ..+..
T Consensus         2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~   81 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL   81 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred             cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence            35889999988888888887777666655554       2467777764         2 88999999873 1  12222


Q ss_pred             --eeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCC-cceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCC
Q psy15995        398 --IKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE-NDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSS  474 (683)
Q Consensus       398 --~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~-~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~  474 (683)
                        -....++|++++-- ++ .|+.+. .+.|.+|++...+ ............+.++...+++++.+.....+.++.+..
T Consensus        82 i~~~~~~g~V~ai~~~-~~-~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~  158 (321)
T PF03178_consen   82 IHSTEVKGPVTAICSF-NG-RLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDE  158 (321)
T ss_dssp             EEEEEESS-EEEEEEE-TT-EEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEET
T ss_pred             EEEEeecCcceEhhhh-CC-EEEEee-cCEEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEEc
Confidence              23457889998866 33 444443 4789999999888 544444444558888888899999999999888876543


Q ss_pred             CcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCC-
Q psy15995        475 NAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNK-  553 (683)
Q Consensus       475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-  553 (683)
                      ....                           +      ..+..-.....+.++.+-++++.++++..+|.+.++..... 
T Consensus       159 ~~~~---------------------------l------~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~  205 (321)
T PF03178_consen  159 ENNK---------------------------L------ILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEI  205 (321)
T ss_dssp             TTE----------------------------E------EEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-
T ss_pred             cCCE---------------------------E------EEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCC
Confidence            2100                           0      11111112334567777756679999999999999988632 


Q ss_pred             --------ccCcceeecCCcCeeEE---EECC--CCC------EEEEEeCCCeEEEE
Q psy15995        554 --------SLSPKAELDHLGPVTDC---SFSP--SNE------YLVASDAHRKVVLY  591 (683)
Q Consensus       554 --------~~~~~~~~~~~~~v~~~---~~s~--~~~------~l~~~~~d~~i~i~  591 (683)
                              .+...........|+++   .+.|  .+.      .++.++.+|.|.+.
T Consensus       206 ~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  206 PNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             cccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence                    12222223355677777   5555  222      47778888888733

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.18  E-value=6.1e-05  Score=72.01  Aligned_cols=267  Identities=16%  Similarity=0.153  Sum_probs=131.8

Q ss_pred             CeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcc-------------------------------------------cccc
Q psy15995         46 QPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAI-------------------------------------------SDIY   81 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~-------------------------------------------~~~~   81 (683)
                      .++.++++++...|+.+ ..|.|.||-....+.                                           ...+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            46788899987777777 678888875432110                                           0112


Q ss_pred             cCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeec-----cc---
Q psy15995         82 TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS-----IG---  153 (683)
Q Consensus        82 ~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-----~~---  153 (683)
                      ....++|++++.|.=| ++|.|+++|.+.|-|+.....++......+.      ........++++.|+-     |+   
T Consensus        83 ~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~------~~~~~~~~vt~ieF~vm~~~~D~ySS  155 (395)
T PF08596_consen   83 DAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESF------LSKSSSSYVTSIEFSVMTLGGDGYSS  155 (395)
T ss_dssp             ---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--------T-SS----EEEEEEEEEE-TTSSSEE
T ss_pred             eccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccc------cccccccCeeEEEEEEEecCCCcccc
Confidence            2346899999999766 9999999999999999888777664443300      0001113455566652     23   


Q ss_pred             eEEEeecCCccEEEEeccc-cceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceee----eecC
Q psy15995        154 FYIASGDISGKVRIWDTVN-KEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGE----ISGQ  228 (683)
Q Consensus       154 ~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  228 (683)
                      -.|++|...|.+.+|.+.- ........+.       ......++..+.         +...+.++|+....    +.+-
T Consensus       156 i~L~vGTn~G~v~~fkIlp~~~g~f~v~~~-------~~~~~~~~~i~~---------I~~i~~~~G~~a~At~~~~~~l  219 (395)
T PF08596_consen  156 ICLLVGTNSGNVLTFKILPSSNGRFSVQFA-------GATTNHDSPILS---------IIPINADTGESALATISAMQGL  219 (395)
T ss_dssp             EEEEEEETTSEEEEEEEEE-GGG-EEEEEE-------EEE--SS----E---------EEEEETTT--B-B-BHHHHHGG
T ss_pred             eEEEEEeCCCCEEEEEEecCCCCceEEEEe-------eccccCCCceEE---------EEEEECCCCCcccCchhHhhcc
Confidence            4788888899999997742 1111111110       000111111111         12222222222111    0000


Q ss_pred             CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEEC-----CCCCEEEEEcCCCcEEEEeCCC
Q psy15995        229 SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYS-----PSGSHFASAGFDGKVFLYDGAS  303 (683)
Q Consensus       229 ~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~l~~~~~dg~i~iw~~~~  303 (683)
                      ...+       .-+. ++....+..++++...+.+..............+.+-     ..+..|++-..+|.++++.+..
T Consensus       220 ~~g~-------~i~g-~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~  291 (395)
T PF08596_consen  220 SKGI-------SIPG-YVVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPS  291 (395)
T ss_dssp             GGT-----------E-EEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT
T ss_pred             ccCC-------CcCc-EEEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCC
Confidence            0000       0011 3334446789999988877665544332333344452     3456788888999999999999


Q ss_pred             CeeEEeccCCc--cccCeEEEEEccCCCEEEEEECCCcEEEEE
Q psy15995        304 ADLVSELGNPA--HKGGVYAVAWKPDGTQLLTASGDKTCKLWD  344 (683)
Q Consensus       304 ~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  344 (683)
                      -+.+..+..+.  ....+....++++|+.++-.+. ..+.++.
T Consensus       292 Lkei~~~~l~~~~d~~~~~~ssis~~Gdi~~~~gp-sE~~l~s  333 (395)
T PF08596_consen  292 LKEIKSVSLPPPLDSRRLSSSSISRNGDIFYWTGP-SEIQLFS  333 (395)
T ss_dssp             --EEEEEE-SS---HHHHTT-EE-TTS-EEEE-SS-SEEEEEE
T ss_pred             chHhhcccCCCccccccccccEECCCCCEEEEeCc-ccEEEEE
Confidence            88887776532  2233445566777776655543 2344443

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.17  E-value=0.0056  Score=56.88  Aligned_cols=230  Identities=22%  Similarity=0.250  Sum_probs=138.3

Q ss_pred             ecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceec--------
Q psy15995        369 WQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQ--------  440 (683)
Q Consensus       369 ~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~--------  440 (683)
                      ..++.+++|+.+| +.+++......+.+...  ...|..+...|+-+.+++-+ |+.+.++++..-......        
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~   80 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS   80 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccc
Confidence            3678899998888 89999844344433333  33499999999888777764 599999998765544311        


Q ss_pred             -----cCCCCcceeEEE----EeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeC
Q psy15995        441 -----GAGHGNQINGMK----ATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVEN  511 (683)
Q Consensus       441 -----~~~~~~~v~~~~----~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (683)
                           .......+..++    ..+...+.......+.+|........                                 
T Consensus        81 ~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~---------------------------------  127 (275)
T PF00780_consen   81 RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNS---------------------------------  127 (275)
T ss_pred             ccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCccc---------------------------------
Confidence                 112233444444    12445555666668887776653110                                 


Q ss_pred             C-ceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecC-----------CcCeeEEEECCCCCEE
Q psy15995        512 G-AKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDH-----------LGPVTDCSFSPSNEYL  579 (683)
Q Consensus       512 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----------~~~v~~~~~s~~~~~l  579 (683)
                      . .....+..+..+..+++.  ++.+++|..++ ..+.|+.++..........           ..++..+... ++.+|
T Consensus       128 f~~~~ke~~lp~~~~~i~~~--~~~i~v~~~~~-f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~L  203 (275)
T PF00780_consen  128 FSKLLKEISLPDPPSSIAFL--GNKICVGTSKG-FYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNEFL  203 (275)
T ss_pred             ccceeEEEEcCCCcEEEEEe--CCEEEEEeCCc-eEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeC-CceEE
Confidence            1 233445556778888888  55777776544 7888888765543322211           1233344443 45666


Q ss_pred             EEEeCCCeEEEEECCCCcccc--ccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeec
Q psy15995        580 VASDAHRKVVLYRVPDFELAH--NKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKN  648 (683)
Q Consensus       580 ~~~~~d~~i~i~~~~~~~~~~--~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~  648 (683)
                      ++-  +..-...|. .|+...  ...+   ...+.++++.  ..+|+..+.+ .|.||++.+++.+..+..
T Consensus       204 l~~--~~~g~fv~~-~G~~~r~~~i~W---~~~p~~~~~~--~pyli~~~~~-~iEV~~~~~~~lvQ~i~~  265 (275)
T PF00780_consen  204 LCY--DNIGVFVNK-NGEPSRKSTIQW---SSAPQSVAYS--SPYLIAFSSN-SIEVRSLETGELVQTIPL  265 (275)
T ss_pred             EEe--cceEEEEcC-CCCcCcccEEEc---CCchhEEEEE--CCEEEEECCC-EEEEEECcCCcEEEEEEC
Confidence            653  333333344 343332  2333   2356666663  4578777665 499999999988877754

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PRK13616 lipoprotein LpqB; Provisional

Probab=98.16  E-value=0.00051  Score=69.70  Aligned_cols=209  Identities=16%  Similarity=0.042  Sum_probs=111.6

Q ss_pred             CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEec------CCCC--EEEEeCCCcccccccccccCCCCcccc
Q psy15995         64 GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD------ISGK--VRIWDTVNKEHILKNEFHPIGGPIKDI  135 (683)
Q Consensus        64 ~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~------~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~  135 (683)
                      +|.+.-.+-..-+.+.-..+....+...++||||+.+|...      .|..  |.+++....  ...+...         
T Consensus       328 ~G~l~~~~~~~~~pv~g~~g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~--~~~lt~g---------  396 (591)
T PRK13616        328 DGSLVSVDGQGVTPVPGAFGQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGV--AVQVLEG---------  396 (591)
T ss_pred             CCeEEEecCCCeeeCCCccccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCc--ceeeecC---------
Confidence            55555544332222222224445788999999999887654      2443  444453221  1111111         


Q ss_pred             eeeeeecceeeeEeeccceEEEeecCC------------ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEE
Q psy15995        136 GTLLSLTSIRNILVLSIGFYIASGDIS------------GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV  203 (683)
Q Consensus       136 ~~~~~~~~i~~~~~s~~~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  203 (683)
                            .......|+|||..|++....            +.+.+.++..++...     ...+.|.++.|||||..+++.
T Consensus       397 ------~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~-----~~~g~Issl~wSpDG~RiA~i  465 (591)
T PRK13616        397 ------HSLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS-----RVPGPISELQLSRDGVRAAMI  465 (591)
T ss_pred             ------CCCCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh-----ccCCCcCeEEECCCCCEEEEE
Confidence                  235667899998877665422            334333444433211     234679999999999999998


Q ss_pred             ecCCceEEEEEEccCCC-ce---eeee-cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC-Cceeeeccc--cccCe
Q psy15995        204 GEGRERFGHVFMSETGT-SV---GEIS-GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP-FKFKMTKQE--HSRFV  275 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~~~-~~---~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~--~~~~v  275 (683)
                      ..+.-....|.....|. .+   ..+. +-...+..+.|.+++..  +.+..++...+|.+.- +.....+..  ....+
T Consensus       466 ~~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L--~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v  543 (591)
T PRK13616        466 IGGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSL--VVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPV  543 (591)
T ss_pred             ECCEEEEEEEEeCCCCceeecccEEeecccCCccccceEecCCEE--EEEecCCCCceEEEecCCccccccCCCCccCce
Confidence            86532222224434453 11   1122 23344688999999974  3444444444554321 211111122  25567


Q ss_pred             EEEEECCCCCEEEEEcCCCcEEE
Q psy15995        276 QAVRYSPSGSHFASAGFDGKVFL  298 (683)
Q Consensus       276 ~~~~~~~~~~~l~~~~~dg~i~i  298 (683)
                      ..++-+++  .++....+|.+.+
T Consensus       544 ~~vaa~~~--~iyv~~~~g~~~l  564 (591)
T PRK13616        544 VAVAASPS--TVYVTDARAVLQL  564 (591)
T ss_pred             EEEecCCc--eEEEEcCCceEEe
Confidence            77777663  4555566664444

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.14  E-value=3.1e-05  Score=73.99  Aligned_cols=282  Identities=12%  Similarity=0.108  Sum_probs=135.4

Q ss_pred             CeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCC-------
Q psy15995        318 GVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN-------  390 (683)
Q Consensus       318 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~-------  390 (683)
                      .|+.+.|.++...|+++...|.|.+|.....+.-..-....   .....+.      -....++.-.+.|+..       
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~---~~~~~~~------~~~~~~~~~~l~di~~r~~~~~~   73 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPP---DLDYNFR------RFSLNNSPGKLTDISDRAPPSLK   73 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE---------------------------S--GGGSS-SEEE-GGG--TT-S
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCc---ccCcccc------cccccCCCcceEEehhhCCcccc
Confidence            58899999999999999999999999876543321000000   0000000      0001111222223221       


Q ss_pred             -CCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceecc-------CCCCcceeEEEEe-----C--
Q psy15995        391 -PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQG-------AGHGNQINGMKAT-----G--  455 (683)
Q Consensus       391 -~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~-------~~~~~~v~~~~~~-----~--  455 (683)
                       +..+...+....++|++++.+ |=.+++.|.++|.+.+.|++....+....       ......++++.|.     +  
T Consensus        74 ~gf~P~~l~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~  152 (395)
T PF08596_consen   74 EGFLPLTLLDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDG  152 (395)
T ss_dssp             EEEEEEEEE---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSS
T ss_pred             cccCchhheeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCc
Confidence             123445566678999999987 55699999999999999998766554421       2234567777776     2  


Q ss_pred             ---CeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCc--eeeeecCCCCCcEEEEc
Q psy15995        456 ---ELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGA--KVSSLPIDYEPSSISLD  530 (683)
Q Consensus       456 ---~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  530 (683)
                         -.+++|...|.+.+|.+............                   ........+.  .+..+.......+.+--
T Consensus       153 ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~-------------------~~~~~~~~~~i~~I~~i~~~~G~~a~At~  213 (395)
T PF08596_consen  153 YSSICLLVGTNSGNVLTFKILPSSNGRFSVQF-------------------AGATTNHDSPILSIIPINADTGESALATI  213 (395)
T ss_dssp             SEEEEEEEEETTSEEEEEEEEE-GGG-EEEEE-------------------EEEE--SS----EEEEEETTT--B-B-BH
T ss_pred             ccceEEEEEeCCCCEEEEEEecCCCCceEEEE-------------------eeccccCCCceEEEEEEECCCCCcccCch
Confidence               36889999999999987521110000000                   0000000000  00001111111111110


Q ss_pred             -------c--CCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEE-----CCCCCEEEEEeCCCeEEEEECCCC
Q psy15995        531 -------H--EHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSF-----SPSNEYLVASDAHRKVVLYRVPDF  596 (683)
Q Consensus       531 -------~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~-----s~~~~~l~~~~~d~~i~i~~~~~~  596 (683)
                             +  .-.-+++...+..++++...+.+...+.. ...-....+.+     ...+..|++-..+|.+++|.++.-
T Consensus       214 ~~~~~l~~g~~i~g~vVvvSe~~irv~~~~~~k~~~K~~-~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~L  292 (395)
T PF08596_consen  214 SAMQGLSKGISIPGYVVVVSESDIRVFKPPKSKGAHKSF-DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSL  292 (395)
T ss_dssp             HHHHGGGGT----EEEEEE-SSEEEEE-TT---EEEEE--SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT-
T ss_pred             hHhhccccCCCcCcEEEEEcccceEEEeCCCCcccceee-ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCc
Confidence                   0  00123333446779999998776654433 22222333444     236778888899999999999987


Q ss_pred             cccccccee--eecccEEEEEecCCCCeEEEeecC
Q psy15995        597 ELAHNKEWG--FHSAKVNCVAWSPDSALVASGSLD  629 (683)
Q Consensus       597 ~~~~~~~~~--~h~~~v~~~~~s~d~~~l~~~~~d  629 (683)
                      +.+......  .+...+....++++|..+.-.+..
T Consensus       293 kei~~~~l~~~~d~~~~~~ssis~~Gdi~~~~gps  327 (395)
T PF08596_consen  293 KEIKSVSLPPPLDSRRLSSSSISRNGDIFYWTGPS  327 (395)
T ss_dssp             -EEEEEE-SS---HHHHTT-EE-TTS-EEEE-SSS
T ss_pred             hHhhcccCCCccccccccccEECCCCCEEEEeCcc
Confidence            766544331  122345566788888877766543

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.09  E-value=0.0045  Score=57.53  Aligned_cols=150  Identities=17%  Similarity=0.212  Sum_probs=93.7

Q ss_pred             CCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEE-------
Q psy15995        282 PSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEF-------  354 (683)
Q Consensus       282 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------  354 (683)
                      ..++.|+.|+.+| +.+++.........+.   +...|..+...|+-+.+++-+ |+.+.++++.........       
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~---~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~   79 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL---KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPK   79 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEe---ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccc
Confidence            4577899999888 9999983332222222   344599999999888777775 599999998765544311       


Q ss_pred             ------EecCcceeceEE--EEecCCEEEEEecCCcEEEEecCCCC----cceeeeeeccccEEEEEEeCCCCEEEEEeC
Q psy15995        355 ------IMGNQVEDQQVS--CLWQGDYLLTVSLSGFISYLDVNNPS----TPIRVIKGHNKPITALALSPDRGTVFTGSH  422 (683)
Q Consensus       355 ------~~~~~~~~~~~~--~~~~~~~l~~~~~~g~i~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  422 (683)
                            ..........++  -...+...++......+.+|......    ...+.+. -...+..++|.  ++.++.|..
T Consensus        80 ~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~  156 (275)
T PF00780_consen   80 SRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTS  156 (275)
T ss_pred             cccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeC
Confidence                  111111122222  12344555556666688888887632    2333333 34678889988  467777765


Q ss_pred             CCcEEEEcCCCCCcceec
Q psy15995        423 DGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       423 dg~i~~w~~~~~~~~~~~  440 (683)
                      + ...+.|+.++......
T Consensus       157 ~-~f~~idl~~~~~~~l~  173 (275)
T PF00780_consen  157 K-GFYLIDLNTGSPSELL  173 (275)
T ss_pred             C-ceEEEecCCCCceEEe
Confidence            4 4888898877665444

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.09  E-value=0.0024  Score=56.59  Aligned_cols=202  Identities=11%  Similarity=0.131  Sum_probs=109.9

Q ss_pred             ccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecC-CcCeEEEEeecCCCeEEEEeeCCCeEEEE
Q psy15995        179 NEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQ-SKPINSCDFKPSRPFRIITGSEDNTIAVF  257 (683)
Q Consensus       179 ~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~~i~iw  257 (683)
                      ..+++....+..++|.|+...|+++.+....+ ...+ ..|+.+..+.-. .+..-.+++..++.+ +++.-.++.+.++
T Consensus        15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i-~els-~~G~vlr~i~l~g~~D~EgI~y~g~~~~-vl~~Er~~~L~~~   91 (248)
T PF06977_consen   15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGEI-YELS-LDGKVLRRIPLDGFGDYEGITYLGNGRY-VLSEERDQRLYIF   91 (248)
T ss_dssp             EE-TT--S-EEEEEEETTTTEEEEEETTTTEE-EEEE-TT--EEEEEE-SS-SSEEEEEE-STTEE-EEEETTTTEEEEE
T ss_pred             eECCCccCCccccEEcCCCCeEEEEECCCCEE-EEEc-CCCCEEEEEeCCCCCCceeEEEECCCEE-EEEEcCCCcEEEE
Confidence            34444556799999999999888888776543 2333 357777776544 356888999888864 5555568899988


Q ss_pred             cCCCCc----e--eeec-----cccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCC---CeeEEecc------CCcccc
Q psy15995        258 EGPPFK----F--KMTK-----QEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS---ADLVSELG------NPAHKG  317 (683)
Q Consensus       258 ~~~~~~----~--~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~---~~~~~~~~------~~~~~~  317 (683)
                      +.....    .  ...+     ..+...+-.++|+|.++.|+++-...-..+|.+..   ........      ......
T Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (248)
T PF06977_consen   92 TIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVR  171 (248)
T ss_dssp             EE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS
T ss_pred             EEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceec
Confidence            863221    1  1111     13456689999999988888887766666666543   11111110      011345


Q ss_pred             CeEEEEEccCC-CEEEEEECCCcEEEEECCCCceeeEEEecCc--------ceeceEEEEecCCEEEEEecCCcEEE
Q psy15995        318 GVYAVAWKPDG-TQLLTASGDKTCKLWDIETKSVVSEFIMGNQ--------VEDQQVSCLWQGDYLLTVSLSGFISY  385 (683)
Q Consensus       318 ~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~~g~i~~  385 (683)
                      .+.+++++|.. ++++....+..|..+| .+++.+..+.....        .+...+++.++|+..+ .++.+..+.
T Consensus       172 d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYI-vsEpNlfy~  246 (248)
T PF06977_consen  172 DLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYI-VSEPNLFYR  246 (248)
T ss_dssp             ---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEE-EETTTEEEE
T ss_pred             cccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEE-EcCCceEEE
Confidence            67899999965 4555556677788888 66777776665542        3455677777664443 444444443

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.05  E-value=0.0022  Score=55.58  Aligned_cols=251  Identities=16%  Similarity=0.144  Sum_probs=148.9

Q ss_pred             CCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCe--EEEEeecCCCeEEEEee----CCCeEEEEcC
Q psy15995        186 GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPI--NSCDFKPSRPFRIITGS----EDNTIAVFEG  259 (683)
Q Consensus       186 ~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~l~~~~----~d~~i~iw~~  259 (683)
                      ..-..++|+|....-++.......+..+++.+.......+...++.-  -.=.|+|+|.++.++-.    .-|.|-+||.
T Consensus        68 aR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~  147 (366)
T COG3490          68 ARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDA  147 (366)
T ss_pred             cccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEec
Confidence            45567888888777666666666677888888776665554333321  13379999986333322    2478999997


Q ss_pred             CC-CceeeeccccccCeEEEEECCCCCEEEEEcC------------------CCcEEEEeCCCCeeEEeccCC--ccccC
Q psy15995        260 PP-FKFKMTKQEHSRFVQAVRYSPSGSHFASAGF------------------DGKVFLYDGASADLVSELGNP--AHKGG  318 (683)
Q Consensus       260 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------dg~i~iw~~~~~~~~~~~~~~--~~~~~  318 (683)
                      +. .+.+-.+..|.-....+.+.+||+.++.+..                  .-++.+.|..+|+.+.+...+  .+.-.
T Consensus       148 r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lS  227 (366)
T COG3490         148 REGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLS  227 (366)
T ss_pred             ccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcc
Confidence            63 3445567778888889999999998887652                  123445555666666555544  35566


Q ss_pred             eEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeee
Q psy15995        319 VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI  398 (683)
Q Consensus       319 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~  398 (683)
                      |..++..+||...+.+-..|.     .....+                      ++..-...+.+..+++..     ...
T Consensus       228 iRHld~g~dgtvwfgcQy~G~-----~~d~pp----------------------Lvg~~~~g~~l~~~~~pe-----e~~  275 (366)
T COG3490         228 IRHLDIGRDGTVWFGCQYRGP-----RNDLPP----------------------LVGHFRKGEPLEFLDLPE-----EQT  275 (366)
T ss_pred             eeeeeeCCCCcEEEEEEeeCC-----CccCCc----------------------ceeeccCCCcCcccCCCH-----HHH
Confidence            777887777765555433321     000000                      011111111222222221     112


Q ss_pred             eeccccEEEEEEeCCCCEEEEEeC-CCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEe
Q psy15995        399 KGHNKPITALALSPDRGTVFTGSH-DGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVD  471 (683)
Q Consensus       399 ~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~  471 (683)
                      ......|-+++.+.+..+++..+- .+...+||..++.......   -.....+.....-++..+.+|.+..+.
T Consensus       276 ~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~---l~daaGva~~~~gf~vssg~G~~~~~s  346 (366)
T COG3490         276 AAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAA---LPDAAGVAAAKGGFAVSSGQGRIIFYS  346 (366)
T ss_pred             HHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEeccc---ccccccceeccCceEEecCCceEEecc
Confidence            223445777888776666665544 4567899999998765542   233444555566667777788887763

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=98.04  E-value=0.0023  Score=58.98  Aligned_cols=221  Identities=12%  Similarity=0.057  Sum_probs=128.3

Q ss_pred             eCCCCCeEEEe--cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCC
Q psy15995         52 GDPKGKNFLYT--NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIG  129 (683)
Q Consensus        52 ~s~~~~~l~~~--~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~  129 (683)
                      |.|+...|++.  .++.|.-|+..+++.. .+. +.+.+.++..-.++..|+++..  .+.+++.+++.....+.....+
T Consensus        32 w~~~~~~L~w~DI~~~~i~r~~~~~g~~~-~~~-~p~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~~  107 (307)
T COG3386          32 WDPDRGALLWVDILGGRIHRLDPETGKKR-VFP-SPGGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLAEPEDG  107 (307)
T ss_pred             CcCCCCEEEEEeCCCCeEEEecCCcCceE-EEE-CCCCcccceeecCCCeEEEEcc--ccEEEeccCCceeEEeccccCC
Confidence            78888888777  5889999999877543 233 3333455554455556666543  3777777655442222111111


Q ss_pred             CCcccceeeeeecceeeeEeeccceEEEeecC-----------CccEEEEeccccceeeeccccccCCCeeEEEEcCCCC
Q psy15995        130 GPIKDIGTLLSLTSIRNILVLSIGFYIASGDI-----------SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQ  198 (683)
Q Consensus       130 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----------d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  198 (683)
                      .         .....+.....|+|.+.+....           -|.|+.+|. .+.....  ...+-..-+.|+||||++
T Consensus       108 ~---------~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l--~~~~~~~~NGla~SpDg~  175 (307)
T COG3386         108 L---------PLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRL--LDDDLTIPNGLAFSPDGK  175 (307)
T ss_pred             C---------CcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEe--ecCcEEecCceEECCCCC
Confidence            1         1145677788888877665433           133444443 2322211  122224557899999999


Q ss_pred             eEEEEecCCceEEEEEEcc--CCCc-----eeeeecCCcCeEEEEeecCCCeEEEEeeCCC-eEEEEcCCCCceeeeccc
Q psy15995        199 RMVVVGEGRERFGHVFMSE--TGTS-----VGEISGQSKPINSCDFKPSRPFRIITGSEDN-TIAVFEGPPFKFKMTKQE  270 (683)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-~i~iw~~~~~~~~~~~~~  270 (683)
                      .++++...... ++-+.++  .+..     ........+..-.++...+|.+ .+++..+| .|.+|+.. ++.+..+.-
T Consensus       176 tly~aDT~~~~-i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~l-w~~a~~~g~~v~~~~pd-G~l~~~i~l  252 (307)
T COG3386         176 TLYVADTPANR-IHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNL-WVAAVWGGGRVVRFNPD-GKLLGEIKL  252 (307)
T ss_pred             EEEEEeCCCCe-EEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCE-EEecccCCceEEEECCC-CcEEEEEEC
Confidence            88888776544 3333333  1211     1222334566677888888875 32443333 89999977 888888777


Q ss_pred             cccCeEEEEECC-CCCEEEEEc
Q psy15995        271 HSRFVQAVRYSP-SGSHFASAG  291 (683)
Q Consensus       271 ~~~~v~~~~~~~-~~~~l~~~~  291 (683)
                      ....+++++|-- +.+.|++.+
T Consensus       253 P~~~~t~~~FgG~~~~~L~iTs  274 (307)
T COG3386         253 PVKRPTNPAFGGPDLNTLYITS  274 (307)
T ss_pred             CCCCCccceEeCCCcCEEEEEe
Confidence            667778887753 445444433

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=98.01  E-value=0.0043  Score=59.32  Aligned_cols=88  Identities=20%  Similarity=0.250  Sum_probs=60.3

Q ss_pred             ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCC-----------------C-EE
Q psy15995        270 EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDG-----------------T-QL  331 (683)
Q Consensus       270 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------------~-~l  331 (683)
                      .....+.++..+|++++.|+...-|.|.++|+.++..++..++- .+..+.-+....++                 . ++
T Consensus       305 D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGY-RdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~Lv  383 (415)
T PF14655_consen  305 DSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGY-RDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLV  383 (415)
T ss_pred             cCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccC-ccceEEEEEeecccccccccccccCCCCcceEEEE
Confidence            34456889999999999888888899999999999887777542 11111111111110                 1 23


Q ss_pred             EEEECCCcEEEEECCCCceeeEEEecC
Q psy15995        332 LTASGDKTCKLWDIETKSVVSEFIMGN  358 (683)
Q Consensus       332 ~~~~~dg~i~iwd~~~~~~~~~~~~~~  358 (683)
                      +-+-.-|.|.+|.++++..+..+....
T Consensus       384 IyaprRg~lEvW~~~~g~Rv~a~~v~k  410 (415)
T PF14655_consen  384 IYAPRRGILEVWSMRQGPRVAAFNVGK  410 (415)
T ss_pred             EEeccCCeEEEEecCCCCEEEEEEeCC
Confidence            345567899999999999888775543

>KOG1898|consensus

Probab=97.98  E-value=0.031  Score=58.08  Aligned_cols=94  Identities=17%  Similarity=0.258  Sum_probs=63.1

Q ss_pred             cCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCC-CcceeEEEEeCCe
Q psy15995        379 LSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGH-GNQINGMKATGEL  457 (683)
Q Consensus       379 ~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~-~~~v~~~~~~~~~  457 (683)
                      .+|.++.|+.-..+..+..+....-+-.-.+..|...++++| -...+++||+...+..+.....+ ...|..+.+...+
T Consensus       910 ~~g~~ytyk~~~~g~~lellh~T~~~~~v~Ai~~f~~~~Lag-vG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~~~R  988 (1205)
T KOG1898|consen  910 SSGFVYTYKFVRNGDKLELLHKTEIPGPVGAICPFQGRVLAG-VGRFLRLYDLGKKKLLRKCELKFIPNRISSIQTYGAR  988 (1205)
T ss_pred             CCCceEEEEEEecCceeeeeeccCCCccceEEeccCCEEEEe-cccEEEEeeCChHHHHhhhhhccCceEEEEEeecceE
Confidence            456677777766555444443222222234566766666655 45689999999888777665444 6788889999999


Q ss_pred             EEEEEcCCeEEEEeCC
Q psy15995        458 LYTCGIDDTIKQVDLS  473 (683)
Q Consensus       458 l~~~~~d~~i~~~~~~  473 (683)
                      ++.|.....+..+..+
T Consensus       989 I~VgD~qeSV~~~~y~ 1004 (1205)
T KOG1898|consen  989 IVVGDIQESVHFVRYR 1004 (1205)
T ss_pred             EEEeeccceEEEEEEe
Confidence            9999887777665544

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.97  E-value=0.0033  Score=57.98  Aligned_cols=224  Identities=15%  Similarity=0.139  Sum_probs=132.7

Q ss_pred             EECCCCcEEE-EecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEec
Q psy15995         92 KYSPSGFYIA-SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDT  170 (683)
Q Consensus        92 ~~s~d~~~la-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~  170 (683)
                      .|.++...|+ +--..+.|.-|+..+++...- ...               ..+.++..-..+..|+++..  .+.+++.
T Consensus        31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~-~~p---------------~~~~~~~~~d~~g~Lv~~~~--g~~~~~~   92 (307)
T COG3386          31 VWDPDRGALLWVDILGGRIHRLDPETGKKRVF-PSP---------------GGFSSGALIDAGGRLIACEH--GVRLLDP   92 (307)
T ss_pred             cCcCCCCEEEEEeCCCCeEEEecCCcCceEEE-ECC---------------CCcccceeecCCCeEEEEcc--ccEEEec
Confidence            4556666444 333566788888765532111 111               22333333334444444432  3455665


Q ss_pred             cccceeeec-cc--cccCCCeeEEEEcCCCCeEEEEec-----C--CceEEEEEEcc-CCCceeeeecCCcCeEEEEeec
Q psy15995        171 VNKEHILKN-EF--HPIGGPIKDIAWSPDNQRMVVVGE-----G--RERFGHVFMSE-TGTSVGEISGQSKPINSCDFKP  239 (683)
Q Consensus       171 ~~~~~~~~~-~~--~~~~~~i~~~~~s~~~~~l~~~~~-----~--~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~  239 (683)
                      +++...... ..  .......+.....|+|.+-+....     .  ......+|..+ .+.....+..+-..-+.++|+|
T Consensus        93 ~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~Sp  172 (307)
T COG3386          93 DTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSP  172 (307)
T ss_pred             cCCceeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECC
Confidence            544431111 11  111245678888999887766544     1  12234677777 5667777777777888999999


Q ss_pred             CCCeEEEEeeCCCeEEEEcCCC--Cc-----eeeeccccccCeEEEEECCCCCEEEEEcCCC-cEEEEeCCCCeeEEecc
Q psy15995        240 SRPFRIITGSEDNTIAVFEGPP--FK-----FKMTKQEHSRFVQAVRYSPSGSHFASAGFDG-KVFLYDGASADLVSELG  311 (683)
Q Consensus       240 ~~~~~l~~~~~d~~i~iw~~~~--~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~  311 (683)
                      +++.++++=+..+.|..|+...  +.     .........+..-.++...+|.+-+++..+| .|.+|+.. ++.+..+.
T Consensus       173 Dg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~  251 (307)
T COG3386         173 DGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIK  251 (307)
T ss_pred             CCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEE
Confidence            9987666667778888887652  11     1122223445566778888888665544444 89999977 99988888


Q ss_pred             CCccccCeEEEEEc-cCCCEEEEEEC
Q psy15995        312 NPAHKGGVYAVAWK-PDGTQLLTASG  336 (683)
Q Consensus       312 ~~~~~~~i~~~~~~-~~~~~l~~~~~  336 (683)
                      .|  ...+++++|- |+.+.|++.+.
T Consensus       252 lP--~~~~t~~~FgG~~~~~L~iTs~  275 (307)
T COG3386         252 LP--VKRPTNPAFGGPDLNTLYITSA  275 (307)
T ss_pred             CC--CCCCccceEeCCCcCEEEEEec
Confidence            73  3677888885 34455554443

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=97.97  E-value=0.0044  Score=56.00  Aligned_cols=153  Identities=16%  Similarity=0.114  Sum_probs=90.4

Q ss_pred             ceEEEEECCCCcEEEEec---CCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCc
Q psy15995         87 AVNVAKYSPSGFYIASGD---ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISG  163 (683)
Q Consensus        87 ~v~~~~~s~d~~~las~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~  163 (683)
                      .+.+.++|+||+.+|...   ....+.++.....  .....               ....+....|++++...+....+.
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~--~~~~~---------------~g~~l~~PS~d~~g~~W~v~~~~~   87 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGP--VRPVL---------------TGGSLTRPSWDPDGWVWTVDDGSG   87 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCc--ceeec---------------cCCccccccccCCCCEEEEEcCCC
Confidence            789999999999887655   2334666654332  21111               113566678999988777777777


Q ss_pred             cEEEEe-ccccce-eeeccccccCCCeeEEEEcCCCCeEEEEecCCc-eEEEEE---EccCC------CceeeeecCCcC
Q psy15995        164 KVRIWD-TVNKEH-ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE-RFGHVF---MSETG------TSVGEISGQSKP  231 (683)
Q Consensus       164 ~i~iwd-~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~-~~~~~~---~~~~~------~~~~~~~~~~~~  231 (683)
                      ..+++. ..+++. ..........+.|.++.+||||..+++...... ..+.+-   .-..+      ............
T Consensus        88 ~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~  167 (253)
T PF10647_consen   88 GVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSD  167 (253)
T ss_pred             ceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCc
Confidence            777774 333322 122222222238999999999999999883211 112222   22233      112222234568


Q ss_pred             eEEEEeecCCCeEEEEeeCCCeEEE
Q psy15995        232 INSCDFKPSRPFRIITGSEDNTIAV  256 (683)
Q Consensus       232 v~~~~~~~~~~~~l~~~~~d~~i~i  256 (683)
                      +..+.|.+++...++....++.+..
T Consensus       168 v~~v~W~~~~~L~V~~~~~~~~~~~  192 (253)
T PF10647_consen  168 VTDVAWSDDSTLVVLGRSAGGPVVR  192 (253)
T ss_pred             ceeeeecCCCEEEEEeCCCCCceeE
Confidence            9999999999865555555554444

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=97.93  E-value=0.0049  Score=56.38  Aligned_cols=193  Identities=17%  Similarity=0.166  Sum_probs=97.9

Q ss_pred             cCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcc-cccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccc
Q psy15995         43 QRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAI-SDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHIL  121 (683)
Q Consensus        43 ~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~-~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~  121 (683)
                      .++....+..-.++..++++..+.|+.= .+.++. .....+-.+.+..+.-++||+++++++......-||-....-..
T Consensus       102 lpgs~~~i~~l~~~~~~l~~~~G~iy~T-~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~  180 (302)
T PF14870_consen  102 LPGSPFGITALGDGSAELAGDRGAIYRT-TDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQP  180 (302)
T ss_dssp             -SS-EEEEEEEETTEEEEEETT--EEEE-SSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EE
T ss_pred             CCCCeeEEEEcCCCcEEEEcCCCcEEEe-CCCCCCeeEcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceE
Confidence            3445554444455555666655554332 233332 23344566889999999999999998776666778754321111


Q ss_pred             ccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEe-ccccceeee--ccccccCCCeeEEEEcCCCC
Q psy15995        122 KNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWD-TVNKEHILK--NEFHPIGGPIKDIAWSPDNQ  198 (683)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd-~~~~~~~~~--~~~~~~~~~i~~~~~s~~~~  198 (683)
                      ..              ......+..+.|.|++...+.+ ..|.|+.=+ ....+...+  .......-.+.+++|.++++
T Consensus       181 ~~--------------r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~  245 (302)
T PF14870_consen  181 HN--------------RNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNE  245 (302)
T ss_dssp             EE----------------SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-
T ss_pred             Ec--------------cCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCC
Confidence            11              1112679999999998766654 778888777 222222211  11112234589999999988


Q ss_pred             eEEEEecCCceEEEEEEccCCCceeeee---cCCcCeEEEEeecCCCeEEEEeeCCCeEEEE
Q psy15995        199 RMVVVGEGRERFGHVFMSETGTSVGEIS---GQSKPINSCDFKPSRPFRIITGSEDNTIAVF  257 (683)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw  257 (683)
                      ..++++.+    ..+...+.|+.-...+   .-......+.|.+..+  -..-+.+|.+.-|
T Consensus       246 ~wa~gg~G----~l~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~--gf~lG~~G~ll~~  301 (302)
T PF14870_consen  246 IWAVGGSG----TLLVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDK--GFVLGQDGVLLRY  301 (302)
T ss_dssp             EEEEESTT-----EEEESSTTSS-EE-GGGTTSSS---EEEEEETTE--EEEE-STTEEEEE
T ss_pred             EEEEeCCc----cEEEeCCCCccceECccccCCCCceEEEEEcCCCc--eEEECCCcEEEEe
Confidence            87776665    3455566666544433   3355688888877654  4445566776554

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=97.87  E-value=0.0061  Score=58.33  Aligned_cols=108  Identities=14%  Similarity=0.131  Sum_probs=67.7

Q ss_pred             EEEEcCCCCeEEEEecCCceEEEEEEcc---CC--Cceee------eecCC-cCeEEEEeecC----------CCeEEEE
Q psy15995        190 DIAWSPDNQRMVVVGEGRERFGHVFMSE---TG--TSVGE------ISGQS-KPINSCDFKPS----------RPFRIIT  247 (683)
Q Consensus       190 ~~~~s~~~~~l~~~~~~~~~~~~~~~~~---~~--~~~~~------~~~~~-~~v~~~~~~~~----------~~~~l~~  247 (683)
                      .++.+|+++.++.+..++..+ ....|+   .+  .....      +.... ..|+++.+-|-          +-.+++.
T Consensus         6 ~isls~~~d~laiA~~~r~vi-l~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~V   84 (415)
T PF14655_consen    6 SISLSPDGDLLAIARGQRLVI-LTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAV   84 (415)
T ss_pred             eEEecCCCCEEEEEcCCEEEE-EEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEE
Confidence            568889999999887765432 222331   12  11111      11111 57787776553          1247999


Q ss_pred             eeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCC---------CEEEEEcCCCcEEEEe
Q psy15995        248 GSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSG---------SHFASAGFDGKVFLYD  300 (683)
Q Consensus       248 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~---------~~l~~~~~dg~i~iw~  300 (683)
                      |..+|.+++|.. ++..+....-|..+|..+......         +.|..... +.|.+.|
T Consensus        85 G~ssG~vrfyte-~G~LL~~Q~~h~~pV~~ik~~~~~~~~~~~~~~eel~ily~-~~v~~Id  144 (415)
T PF14655_consen   85 GTSSGYVRFYTE-NGVLLLSQLLHEEPVLKIKCRSTKIPRHPGDSSEELSILYP-SAVVIID  144 (415)
T ss_pred             EecccEEEEEec-cchHHHHHhcCccceEEEEecccCCCCCCcccccEEEEEEC-CEEEEEe
Confidence            999999999984 777777777899999999875421         34444443 5555555

>KOG1008|consensus

Probab=97.82  E-value=6e-06  Score=78.87  Aligned_cols=199  Identities=18%  Similarity=0.178  Sum_probs=124.9

Q ss_pred             CeEEEEeecCCC-eEEEEeeCCCeEEEEcCCCCce--eeeccccccCeEEEEECCC-CCEEEEEc----CCCcEEEEeCC
Q psy15995        231 PINSCDFKPSRP-FRIITGSEDNTIAVFEGPPFKF--KMTKQEHSRFVQAVRYSPS-GSHFASAG----FDGKVFLYDGA  302 (683)
Q Consensus       231 ~v~~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~v~~~~~~~~-~~~l~~~~----~dg~i~iw~~~  302 (683)
                      .+.|+++.-+.+ -+++.|..+|.|.+-..+...-  .....++....++++|++- .+.||+|-    .|..+.|||+.
T Consensus        58 y~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~  137 (783)
T KOG1008|consen   58 YVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDIN  137 (783)
T ss_pred             CceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecc
Confidence            345555443322 3588888999999887554322  2344567889999999984 45666663    25679999998


Q ss_pred             CC--eeEEeccCC-ccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCc-eeeEEEecCcceeceEEEEe-cCCEEEEE
Q psy15995        303 SA--DLVSELGNP-AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKS-VVSEFIMGNQVEDQQVSCLW-QGDYLLTV  377 (683)
Q Consensus       303 ~~--~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~l~~~  377 (683)
                      ++  .+....... .......+++|..+.+++.+|...+.++++|++... ....+   .......+.+.| .+++++..
T Consensus       138 s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~sv---nTk~vqG~tVdp~~~nY~cs~  214 (783)
T KOG1008|consen  138 SLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSV---NTKYVQGITVDPFSPNYFCSN  214 (783)
T ss_pred             cccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhh---hhhhcccceecCCCCCceecc
Confidence            77  222211111 133445688899889999999988899999998321 11111   111233455556 55665555


Q ss_pred             ecCCcEEEEe-cCCCCcceeeeeecc----ccEEEEEEeCCC-CEEEEEe-CCCcEEEEcCCC
Q psy15995        378 SLSGFISYLD-VNNPSTPIRVIKGHN----KPITALALSPDR-GTVFTGS-HDGFITRWNAKT  433 (683)
Q Consensus       378 ~~~g~i~~~~-~~~~~~~~~~~~~~~----~~v~~~~~~~~~-~~l~~~~-~dg~i~~w~~~~  433 (683)
                      . +|.+.+|| ..+-+.++..+....    ..+..++|+|.. ..+++.. ..++|+++|+..
T Consensus       215 ~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~  276 (783)
T KOG1008|consen  215 S-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV  276 (783)
T ss_pred             c-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence            4 99999999 555444544443322    248999999943 3444444 457899998753

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.82  E-value=0.0032  Score=64.08  Aligned_cols=152  Identities=13%  Similarity=0.201  Sum_probs=90.5

Q ss_pred             CCeeEEEEcCCCCeEEEEec----CCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCC----------
Q psy15995        186 GPIKDIAWSPDNQRMVVVGE----GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSED----------  251 (683)
Q Consensus       186 ~~i~~~~~s~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----------  251 (683)
                      ..+.+.+++|||+.+++...    +.+....+|....+.....+..- ...+.-.|+|++.. +.+....          
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g-~~~t~PsWspDG~~-lw~v~dg~~~~~v~~~~  427 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEG-HSLTRPSWSLDADA-VWVVVDGNTVVRVIRDP  427 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecC-CCCCCceECCCCCc-eEEEecCcceEEEeccC
Confidence            46789999999999988872    12233456665544333333322 24888999999775 4444322          


Q ss_pred             --CeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEE---EeCCCCeeEEe-----ccCCccccCeEE
Q psy15995        252 --NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSE-----LGNPAHKGGVYA  321 (683)
Q Consensus       252 --~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i---w~~~~~~~~~~-----~~~~~~~~~i~~  321 (683)
                        +.+.+.++..+....   .....|..+.|||||..++... +|.|++   -....|+ ...     +. ..-...+.+
T Consensus       428 ~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~-~~l~~~~~l~-~~l~~~~~~  501 (591)
T PRK13616        428 ATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ-YALTNPREVG-PGLGDTAVS  501 (591)
T ss_pred             CCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc-eeecccEEee-cccCCcccc
Confidence              233333443333222   2345799999999999888766 577777   4544554 111     11 112334688


Q ss_pred             EEEccCCCEEEEEECCCcEEEEECC
Q psy15995        322 VAWKPDGTQLLTASGDKTCKLWDIE  346 (683)
Q Consensus       322 ~~~~~~~~~l~~~~~dg~i~iwd~~  346 (683)
                      +.|.+++.++ ++..++.-.+|.+.
T Consensus       502 l~W~~~~~L~-V~~~~~~~~v~~v~  525 (591)
T PRK13616        502 LDWRTGDSLV-VGRSDPEHPVWYVN  525 (591)
T ss_pred             ceEecCCEEE-EEecCCCCceEEEe
Confidence            9999988854 55555544455443

>KOG1008|consensus

Probab=97.81  E-value=7.8e-06  Score=78.13  Aligned_cols=200  Identities=19%  Similarity=0.217  Sum_probs=126.7

Q ss_pred             cCeEEEEECCCC--CEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc-CCCEEEEEEC----CCcEEEEEC
Q psy15995        273 RFVQAVRYSPSG--SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP-DGTQLLTASG----DKTCKLWDI  345 (683)
Q Consensus       273 ~~v~~~~~~~~~--~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~----dg~i~iwd~  345 (683)
                      ..+.|+++..+.  ..+++|..+|.|.+-..+.......-..|.+..+.++++|.+ |.+.|++|-.    |..+.|||+
T Consensus        57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi  136 (783)
T KOG1008|consen   57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI  136 (783)
T ss_pred             CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence            445666655543  478889999999998877654442222245888999999998 5666777632    557999999


Q ss_pred             CCC--ceee--EEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeC-CCCEEEEE
Q psy15995        346 ETK--SVVS--EFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSP-DRGTVFTG  420 (683)
Q Consensus       346 ~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~  420 (683)
                      .++  .+..  .+..+.......+++..+.+.+++|.....+.++|++........+  ....+..+.+.| .++++++-
T Consensus       137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~sv--nTk~vqG~tVdp~~~nY~cs~  214 (783)
T KOG1008|consen  137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSV--NTKYVQGITVDPFSPNYFCSN  214 (783)
T ss_pred             ccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhh--hhhhcccceecCCCCCceecc
Confidence            876  2222  1222112222344555577888999999999999998433222222  234567788888 66777766


Q ss_pred             eCCCcEEEEc-CCCCCcceeccC----CCCcceeEEEEe---CCeEEEEE-cCCeEEEEeCCCC
Q psy15995        421 SHDGFITRWN-AKTGENDRVQGA----GHGNQINGMKAT---GELLYTCG-IDDTIKQVDLSSN  475 (683)
Q Consensus       421 ~~dg~i~~w~-~~~~~~~~~~~~----~~~~~v~~~~~~---~~~l~~~~-~d~~i~~~~~~~~  475 (683)
                      . ||.|.+|| ...-+.......    .....+..+++.   ...+++.. ..++|+++++...
T Consensus       215 ~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~v  277 (783)
T KOG1008|consen  215 S-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICVV  277 (783)
T ss_pred             c-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccccc
Confidence            5 99999999 333322211111    122357788877   44455554 4578999998754

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.77  E-value=0.0096  Score=52.37  Aligned_cols=173  Identities=13%  Similarity=0.182  Sum_probs=115.3

Q ss_pred             ccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCC
Q psy15995        268 KQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIET  347 (683)
Q Consensus       268 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  347 (683)
                      +.+-...+.++.|+|+.+.|++......-.++=..+|+.+.++...+ -...-.+.+..++++.++--.++.+.++.+..
T Consensus        81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g-~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~  159 (316)
T COG3204          81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTG-FSDPETIEYIGGNQFVIVDERDRALYLFTVDA  159 (316)
T ss_pred             cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccc-cCChhHeEEecCCEEEEEehhcceEEEEEEcC
Confidence            34555669999999999999988888888888778899999987654 34456778888888877777788888887776


Q ss_pred             CceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEE
Q psy15995        348 KSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFIT  427 (683)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  427 (683)
                      ...+......                                  .-++......+.....++|.|....|..+-+-.-+.
T Consensus       160 ~t~~~~~~~~----------------------------------~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~  205 (316)
T COG3204         160 DTTVISAKVQ----------------------------------KIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIG  205 (316)
T ss_pred             CccEEeccce----------------------------------EEeccccCCCCcCceeeecCCCCceEEEEEccCCcE
Confidence            6443322110                                  001111122256677899999998888888877777


Q ss_pred             EEcCCCCCcceec--cCC-------CCcceeEEEEe---CCeEEEEEcCCeEEEEeCCCC
Q psy15995        428 RWNAKTGENDRVQ--GAG-------HGNQINGMKAT---GELLYTCGIDDTIKQVDLSSN  475 (683)
Q Consensus       428 ~w~~~~~~~~~~~--~~~-------~~~~v~~~~~~---~~~l~~~~~d~~i~~~~~~~~  475 (683)
                      +|...........  ...       .-..+.++.++   +.+++.+..++.+...|....
T Consensus       206 I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G~  265 (316)
T COG3204         206 IFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSGE  265 (316)
T ss_pred             EEEEecCCcccccccccCcccccceEeeccccceecCCCCcEEEEecCCceEEEEecCCC
Confidence            7776543311111  011       12345666666   667777777777777777654

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.76  E-value=0.0029  Score=65.27  Aligned_cols=138  Identities=11%  Similarity=0.149  Sum_probs=96.3

Q ss_pred             CCCcEEEEcCCCCCcceeccCCCCcceeEEEEe-------CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeec
Q psy15995        422 HDGFITRWNAKTGENDRVQGAGHGNQINGMKAT-------GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDID  494 (683)
Q Consensus       422 ~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~-------~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (683)
                      ....|+-.|+..|+.+.........+|..+...       +...+.|-.++.+..||.+-...  ...  .         
T Consensus       502 ~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~--k~v--~---------  568 (794)
T PF08553_consen  502 NPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGN--KLV--D---------  568 (794)
T ss_pred             CCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCC--cee--e---------
Confidence            457899999999999888866565667777764       45678888999999999874320  000  0         


Q ss_pred             CCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECC
Q psy15995        495 ENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSP  574 (683)
Q Consensus       495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~  574 (683)
                                        ............+|++.+.+| +||+|+.+|.|++||-.+.+ -.....+-..+|..+..+.
T Consensus       569 ------------------~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~-AKT~lp~lG~pI~~iDvt~  628 (794)
T PF08553_consen  569 ------------------SQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKR-AKTALPGLGDPIIGIDVTA  628 (794)
T ss_pred             ------------------ccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchh-hhhcCCCCCCCeeEEEecC
Confidence                              000011233345777777666 78999999999999954432 2223335679999999999


Q ss_pred             CCCEEEEEeCCCeEEEEEC
Q psy15995        575 SNEYLVASDAHRKVVLYRV  593 (683)
Q Consensus       575 ~~~~l~~~~~d~~i~i~~~  593 (683)
                      ||+++++.+. ..+.+++.
T Consensus       629 DGkwilaTc~-tyLlLi~t  646 (794)
T PF08553_consen  629 DGKWILATCK-TYLLLIDT  646 (794)
T ss_pred             CCcEEEEeec-ceEEEEEE
Confidence            9999998774 55777765

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG4640|consensus

Probab=97.69  E-value=0.00017  Score=69.38  Aligned_cols=94  Identities=15%  Similarity=0.300  Sum_probs=76.5

Q ss_pred             CcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEE-EEEecCCCCeEEEeecCCcEEEEeCCCCce
Q psy15995        564 LGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVN-CVAWSPDSALVASGSLDTTIIIWSLASPAK  642 (683)
Q Consensus       564 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~-~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~  642 (683)
                      ...+..+.|+|.-..+|.+..+|.+.+..+. .+.+.....  |...++ +++|.|||++||+|-.||+|++-|++++..
T Consensus        20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~--p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~   96 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPI--PGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGR   96 (665)
T ss_pred             ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccC--CCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCc
Confidence            3457889999999999999999999999988 444444443  566677 999999999999999999999999999988


Q ss_pred             eeEeecCCCCCCeeEEEEc
Q psy15995        643 HIIIKNAHPQSQITRLQWL  661 (683)
Q Consensus       643 ~~~~~~~~~~~~v~~l~~~  661 (683)
                      +...... ....|..+-|.
T Consensus        97 l~~~~~s-~e~~is~~~w~  114 (665)
T KOG4640|consen   97 LVSFLFS-VETDISKGIWD  114 (665)
T ss_pred             eeccccc-cccchheeecc
Confidence            7764322 36778888885

>smart00320 WD40 WD40 repeats

Probab=97.68  E-value=7.4e-05  Score=44.61  Aligned_cols=38  Identities=29%  Similarity=0.650  Sum_probs=33.6

Q ss_pred             cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEe
Q psy15995         76 AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWD  113 (683)
Q Consensus        76 ~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd  113 (683)
                      +....+..|...|.++.|.++++++++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            34556778999999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.65  E-value=0.041  Score=57.23  Aligned_cols=145  Identities=14%  Similarity=0.121  Sum_probs=98.7

Q ss_pred             CCeEEEEecCCceEEEEEEccCCCceeeeecCCcC-eEEEEeecC----CCeEEEEeeCCCeEEEEcCCCCc--eeee-c
Q psy15995        197 NQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKP-INSCDFKPS----RPFRIITGSEDNTIAVFEGPPFK--FKMT-K  268 (683)
Q Consensus       197 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~----~~~~l~~~~~d~~i~iw~~~~~~--~~~~-~  268 (683)
                      .+.++.........++-.+++.|+.+.+...|... |..++-...    .+...+.|-.+..+..||.+-..  .+.. .
T Consensus       492 d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~  571 (794)
T PF08553_consen  492 DRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQS  571 (794)
T ss_pred             ccceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccc
Confidence            34445554444444778888899999999988755 555433211    11136778888899999976532  2211 1


Q ss_pred             --cccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEEC
Q psy15995        269 --QEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI  345 (683)
Q Consensus       269 --~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  345 (683)
                        -.......|++-+.+| +||+|+.+|.|++||- .+.. .....|+-..+|.+|..+.||+++++.+. ..|.+++.
T Consensus       572 k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~-AKT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi~t  646 (794)
T PF08553_consen  572 KQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKR-AKTALPGLGDPIIGIDVTADGKWILATCK-TYLLLIDT  646 (794)
T ss_pred             cccccCCCceEEEecCCc-eEEEEeCCCcEEeecc-cchh-hhhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEEEEE
Confidence              1234567888888888 6999999999999994 4433 22233457899999999999999888775 46777775

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG1898|consensus

Probab=97.65  E-value=0.11  Score=54.31  Aligned_cols=135  Identities=17%  Similarity=0.221  Sum_probs=84.9

Q ss_pred             CCcEEEEEcCCCccCccee--ecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCC
Q psy15995        542 DSKVHIYELNNKSLSPKAE--LDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPD  619 (683)
Q Consensus       542 dg~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d  619 (683)
                      +|.++.|++-......+..  .+-.++|.  +..|-..++.+|- ...+++||+...+++...+...-...|+.+++  .
T Consensus       911 ~g~~ytyk~~~~g~~lellh~T~~~~~v~--Ai~~f~~~~Lagv-G~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt--~  985 (1205)
T KOG1898|consen  911 SGFVYTYKFVRNGDKLELLHKTEIPGPVG--AICPFQGRVLAGV-GRFLRLYDLGKKKLLRKCELKFIPNRISSIQT--Y  985 (1205)
T ss_pred             CCceEEEEEEecCceeeeeeccCCCccce--EEeccCCEEEEec-ccEEEEeeCChHHHHhhhhhccCceEEEEEee--c
Confidence            4567888764332211111  11233443  4456555555543 46799999999988877776633667888888  4


Q ss_pred             CCeEEEeecCCcEEEEeCCCCc-eeeEeecCCCCCCeeEEEEccCCeEEEeeCCCcEEEEeec
Q psy15995        620 SALVASGSLDTTIIIWSLASPA-KHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       620 ~~~l~~~~~d~~v~iw~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~v~vw~~~  681 (683)
                      +..+++|...-.|.++..+... .+..+....-...|+.+.+.|.+.++.+..=|.+.+-++.
T Consensus       986 ~~RI~VgD~qeSV~~~~y~~~~n~l~~fadD~~pR~Vt~~~~lD~~tvagaDrfGNi~~vR~P 1048 (1205)
T KOG1898|consen  986 GARIVVGDIQESVHFVRYRREDNQLIVFADDPVPRHVTALELLDYDTVAGADRFGNIAVVRIP 1048 (1205)
T ss_pred             ceEEEEeeccceEEEEEEecCCCeEEEEeCCCccceeeEEEEecCCceeeccccCcEEEEECC
Confidence            5678888776666665554433 3333332222457888888888889888888888776664

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=97.63  E-value=0.064  Score=50.95  Aligned_cols=50  Identities=8%  Similarity=0.293  Sum_probs=37.6

Q ss_pred             CeEEEeeCCCCCeEEEecCCeEEEEeCCCCcc---c----ccccCcccceEEEEECCC
Q psy15995         46 QPIVLGGDPKGKNFLYTNGNSVIIRNIENPAI---S----DIYTEHSCAVNVAKYSPS   96 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~---~----~~~~~h~~~v~~~~~s~d   96 (683)
                      +++.|+|.|||+++++...|.|.+++ .++..   +    .+..........+++.|+
T Consensus         3 ~P~~~a~~pdG~l~v~e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~   59 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVAERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPD   59 (331)
T ss_dssp             SEEEEEEETTSCEEEEETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred             CceEEEEeCCCcEEEEeCCceEEEEe-CCCcCcceecccccccccccCCcccceeccc
Confidence            67899999999999999999999999 33332   1    123345678899999994

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.58  E-value=0.0058  Score=45.29  Aligned_cols=99  Identities=13%  Similarity=0.169  Sum_probs=70.3

Q ss_pred             eeEEEECC---C-CCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCce
Q psy15995        567 VTDCSFSP---S-NEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAK  642 (683)
Q Consensus       567 v~~~~~s~---~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~  642 (683)
                      |+++++..   | .+.|++|++|..|++|+-..  .+....   ..+.|++++-... ..++.+-.+|+|-+|+-  ...
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e--~~~Ei~---e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~~R   73 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE--IVAEIT---ETDKVTSLCSLGG-GRFAYALANGTVGVYDR--SQR   73 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc--EEEEEe---cccceEEEEEcCC-CEEEEEecCCEEEEEeC--cce
Confidence            56666654   2 26899999999999998653  332222   4577888887766 56888999999999975  345


Q ss_pred             eeEeecCCCCCCeeEEEEccCC-----eEEEeeCCCcEE
Q psy15995        643 HIIIKNAHPQSQITRLQWLDND-----LLVSVGQDCNTK  676 (683)
Q Consensus       643 ~~~~~~~~~~~~v~~l~~~~~~-----~l~s~~~d~~v~  676 (683)
                      +.+.+.   ...++++++.|-+     .|++|=.+|.|-
T Consensus        74 lWRiKS---K~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   74 LWRIKS---KNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             eeeecc---CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            555554   3458888877322     788888888764

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=97.57  E-value=0.048  Score=47.98  Aligned_cols=198  Identities=17%  Similarity=0.165  Sum_probs=124.7

Q ss_pred             ccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCcee
Q psy15995        272 SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVV  351 (683)
Q Consensus       272 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  351 (683)
                      .+-+..+.++.+  +...+..+.-+++.|+.+.+....+..-...+--.++..  .|++..++..+.-+.+.|+.+.+..
T Consensus        86 ~~l~~Dv~vse~--yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdpssP  161 (370)
T COG5276          86 RDLFADVRVSEE--YVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSP  161 (370)
T ss_pred             hhhhheeEeccc--EEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCCc
Confidence            344556666644  677777778899999988765444432112233444444  4888888886667888898875533


Q ss_pred             eEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccc-cEEEEEEeCCCCEEEEEeCCCcEEEEc
Q psy15995        352 SEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNK-PITALALSPDRGTVFTGSHDGFITRWN  430 (683)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~~w~  430 (683)
                      .-.-.............-.|++...+..++-+.+.|+.++..+...-.-..+ .+.++..+++.-+++..  +.-+.+-|
T Consensus       162 ~lagrya~~~~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy--~egvlivd  239 (370)
T COG5276         162 QLAGRYALPGGDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVY--DEGVLIVD  239 (370)
T ss_pred             eeeeeeccCCCCceeEEEecCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEc--ccceEEEe
Confidence            2211111111111233346888889999999999999998887654333333 67888888776555554  33477777


Q ss_pred             CCCCCcceeccCCCCc---ceeEEEEeCCeEEEEEcCCeEEEEeCCCC
Q psy15995        431 AKTGENDRVQGAGHGN---QINGMKATGELLYTCGIDDTIKQVDLSSN  475 (683)
Q Consensus       431 ~~~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~~d~~i~~~~~~~~  475 (683)
                      ..+.+....+..-...   .+..+...+++......+.-+.+.|+++.
T Consensus       240 ~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisnp  287 (370)
T COG5276         240 VSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISNP  287 (370)
T ss_pred             cCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccCC
Confidence            7766654444333333   33445666888888888887877777654

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.56  E-value=0.0097  Score=44.13  Aligned_cols=96  Identities=24%  Similarity=0.342  Sum_probs=65.8

Q ss_pred             eecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccc
Q psy15995        237 FKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHK  316 (683)
Q Consensus       237 ~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~  316 (683)
                      |..++..-|++|+.|..|++|+-.  ..+..+.. ...|+++.-...+ .++.+-.+|+|-+|+-  ...+...+   .+
T Consensus        10 ~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e-~~~v~~L~~~~~~-~F~Y~l~NGTVGvY~~--~~RlWRiK---SK   80 (111)
T PF14783_consen   10 FDGDGENELLVGSDDFEIRVFKGD--EIVAEITE-TDKVTSLCSLGGG-RFAYALANGTVGVYDR--SQRLWRIK---SK   80 (111)
T ss_pred             cCCCCcceEEEecCCcEEEEEeCC--cEEEEEec-ccceEEEEEcCCC-EEEEEecCCEEEEEeC--cceeeeec---cC
Confidence            344555679999999999999854  44555543 4568888777764 6888888999999984  33334443   34


Q ss_pred             cCeEEEEEcc-CC---CEEEEEECCCcEE
Q psy15995        317 GGVYAVAWKP-DG---TQLLTASGDKTCK  341 (683)
Q Consensus       317 ~~i~~~~~~~-~~---~~l~~~~~dg~i~  341 (683)
                      ..+.++++.. ++   ..|++|-.+|.|-
T Consensus        81 ~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   81 NQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             CCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            4467776654 22   2688888888764

>KOG4640|consensus

Probab=97.55  E-value=0.00043  Score=66.76  Aligned_cols=95  Identities=16%  Similarity=0.188  Sum_probs=79.6

Q ss_pred             CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeE-EEEECCCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy15995        229 SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQ-AVRYSPSGSHFASAGFDGKVFLYDGASADLV  307 (683)
Q Consensus       229 ~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~  307 (683)
                      ...+..+.|+|.-+. +|++..+|.+.+...+ .+.+.++.-|...++ +++|.|||+.||+|-.||+|++.|.+++..+
T Consensus        20 ~~~i~~~ewnP~~dL-iA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l   97 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDL-IATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRL   97 (665)
T ss_pred             ccceEEEEEcCccch-hheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCce
Confidence            345778899999884 9999999999999887 777888887777777 9999999999999999999999999999888


Q ss_pred             EeccCCccccCeEEEEEcc
Q psy15995        308 SELGNPAHKGGVYAVAWKP  326 (683)
Q Consensus       308 ~~~~~~~~~~~i~~~~~~~  326 (683)
                      ..... .....|.++-|.+
T Consensus        98 ~~~~~-s~e~~is~~~w~~  115 (665)
T KOG4640|consen   98 VSFLF-SVETDISKGIWDR  115 (665)
T ss_pred             ecccc-ccccchheeeccc
Confidence            77421 2566788888863

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.55  E-value=0.022  Score=50.16  Aligned_cols=165  Identities=11%  Similarity=0.131  Sum_probs=113.1

Q ss_pred             ccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec
Q psy15995         81 YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD  160 (683)
Q Consensus        81 ~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  160 (683)
                      +.|-+..|.++.|+|+.+.|++......-.||=..+|+.+.++.....             .....+.+..+|++.++--
T Consensus        81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~-------------~DpE~Ieyig~n~fvi~dE  147 (316)
T COG3204          81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGF-------------SDPETIEYIGGNQFVIVDE  147 (316)
T ss_pred             cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEeccccc-------------CChhHeEEecCCEEEEEeh
Confidence            345566699999999999999988888888888888888888766542             4566788899999999988


Q ss_pred             CCccEEEEeccccceee-----ecccc---ccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC---ceeeeecC-
Q psy15995        161 ISGKVRIWDTVNKEHIL-----KNEFH---PIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT---SVGEISGQ-  228 (683)
Q Consensus       161 ~d~~i~iwd~~~~~~~~-----~~~~~---~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-  228 (683)
                      .++.+.+..+.......     +..+.   ........++|.|..+.+.++-+.+-.  .++.++.+.   .......+ 
T Consensus       148 R~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~--~I~~~~~~~~~l~~~~~~~~~  225 (316)
T COG3204         148 RDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPI--GIFEVTQSPSSLSVHASLDPT  225 (316)
T ss_pred             hcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCc--EEEEEecCCcccccccccCcc
Confidence            89999888877653221     11111   114567789999999999988876653  344443211   11111222 


Q ss_pred             ------CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC
Q psy15995        229 ------SKPINSCDFKPSRPFRIITGSEDNTIAVFEGP  260 (683)
Q Consensus       229 ------~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~  260 (683)
                            -..|..+.|++..+.+++.+.+++.+.-.|..
T Consensus       226 ~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~  263 (316)
T COG3204         226 ADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLS  263 (316)
T ss_pred             cccceEeeccccceecCCCCcEEEEecCCceEEEEecC
Confidence                  22466777887766667777777777666643

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=97.53  E-value=0.032  Score=50.46  Aligned_cols=149  Identities=18%  Similarity=0.232  Sum_probs=91.8

Q ss_pred             CeEEEeeCCCCCeEEEec--CC--eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEe-CCCcccc
Q psy15995         46 QPIVLGGDPKGKNFLYTN--GN--SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWD-TVNKEHI  120 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~--~~--~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd-~~~~~~~  120 (683)
                      .+...++|+||+.+|+..  ++  .++++...... ...+.+.  .++...|++++...+....+...+++. ..+++..
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~-~~~~~g~--~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~  101 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPV-RPVLTGG--SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE  101 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcc-eeeccCC--ccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence            677889999999998866  43  55555543322 2223333  788999999987777777666777774 2222111


Q ss_pred             -cccccccCCCCcccceeeeeecceeeeEeeccceEEEeec---CCccEEEEeccc---c-ceeeec--c-ccccCCCee
Q psy15995        121 -LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD---ISGKVRIWDTVN---K-EHILKN--E-FHPIGGPIK  189 (683)
Q Consensus       121 -~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~d~~i~iwd~~~---~-~~~~~~--~-~~~~~~~i~  189 (683)
                       .......            ....|..+.+||||.++|...   .++.|.+=-+..   + ......  . .......+.
T Consensus       102 ~~~v~~~~------------~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~  169 (253)
T PF10647_consen  102 PVEVDWPG------------LRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVT  169 (253)
T ss_pred             eEEecccc------------cCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcce
Confidence             1111110            002799999999999888755   356777765542   2 111111  1 112246789


Q ss_pred             EEEEcCCCCeEEEEecCCce
Q psy15995        190 DIAWSPDNQRMVVVGEGRER  209 (683)
Q Consensus       190 ~~~~s~~~~~l~~~~~~~~~  209 (683)
                      +++|.+++.+++........
T Consensus       170 ~v~W~~~~~L~V~~~~~~~~  189 (253)
T PF10647_consen  170 DVAWSDDSTLVVLGRSAGGP  189 (253)
T ss_pred             eeeecCCCEEEEEeCCCCCc
Confidence            99999999877777665543

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PRK10115 protease 2; Provisional

Probab=97.50  E-value=0.18  Score=53.30  Aligned_cols=238  Identities=8%  Similarity=0.019  Sum_probs=119.4

Q ss_pred             eEEEeeCCCCCeEEEecC------CeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCC------CCEEEEeC
Q psy15995         47 PIVLGGDPKGKNFLYTNG------NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDIS------GKVRIWDT  114 (683)
Q Consensus        47 ~~~~~~s~~~~~l~~~~~------~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~d------g~i~iwd~  114 (683)
                      +..+.+||||++|+++.+      ..|++.|+.+++.+...-....  ..++|++|++.|+-...+      ..|..+++
T Consensus       129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~l  206 (686)
T PRK10115        129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTI  206 (686)
T ss_pred             EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEEC
Confidence            445678999999999843      2699999998874432222222  469999999877554322      35888888


Q ss_pred             CCcc--cccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC---CccEEEEecc--ccceeeeccccccCCC
Q psy15995        115 VNKE--HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI---SGKVRIWDTV--NKEHILKNEFHPIGGP  187 (683)
Q Consensus       115 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---d~~i~iwd~~--~~~~~~~~~~~~~~~~  187 (683)
                      .++.  ....++...  .           ........+.|+++++..+.   ++.+.+++..  +++....  .....+.
T Consensus       207 gt~~~~d~lv~~e~~--~-----------~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~  271 (686)
T PRK10115        207 GTPASQDELVYEEKD--D-----------TFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVF--LPRRKDH  271 (686)
T ss_pred             CCChhHCeEEEeeCC--C-----------CEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEE--EECCCCC
Confidence            8772  222221111  0           01113334547776665433   4578888853  2321111  1111122


Q ss_pred             eeEEEEcCCCCeEEEEecCCceEEEEEEccCC--CceeeeecC-C-cCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC-C
Q psy15995        188 IKDIAWSPDNQRMVVVGEGRERFGHVFMSETG--TSVGEISGQ-S-KPINSCDFKPSRPFRIITGSEDNTIAVFEGPP-F  262 (683)
Q Consensus       188 i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~-~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~  262 (683)
                      ...+. . .+..+.+....+.....+......  .....+..+ . ..+..+.+.  ++.++++...++.-+++-+.. +
T Consensus       272 ~~~~~-~-~~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~l~~~~~~~g~~~l~~~~~~~  347 (686)
T PRK10115        272 EYSLD-H-YQHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF--TDWLVVEERQRGLTSLRQINRKT  347 (686)
T ss_pred             EEEEE-e-CCCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE--CCEEEEEEEeCCEEEEEEEcCCC
Confidence            22222 2 234444444332222333332221  222344444 3 357777776  345677777787766654432 2


Q ss_pred             ceeeecc-ccccCeEEEEEC--CCCC-EEEEEcC---CCcEEEEeCCCCe
Q psy15995        263 KFKMTKQ-EHSRFVQAVRYS--PSGS-HFASAGF---DGKVFLYDGASAD  305 (683)
Q Consensus       263 ~~~~~~~-~~~~~v~~~~~~--~~~~-~l~~~~~---dg~i~iw~~~~~~  305 (683)
                      +....+. .....+..+.++  +++. .+++.+.   -+.+..+|..+++
T Consensus       348 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~  397 (686)
T PRK10115        348 REVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE  397 (686)
T ss_pred             CceEEecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence            2233322 222223333344  3333 3333332   3568888877654

>KOG4499|consensus

Probab=97.48  E-value=0.038  Score=46.77  Aligned_cols=147  Identities=12%  Similarity=0.062  Sum_probs=95.9

Q ss_pred             CCeeEEEEcCCCCeEEEEecCCc-----eEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEc--
Q psy15995        186 GPIKDIAWSPDNQRMVVVGEGRE-----RFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFE--  258 (683)
Q Consensus       186 ~~i~~~~~s~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~--  258 (683)
                      .+.+.-..+|+|++..-.-.+..     ....++.|..+..+..+...-.--+.++|+.+.+...++-+.+-+|.-||  
T Consensus       109 nR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd  188 (310)
T KOG4499|consen  109 NRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDYD  188 (310)
T ss_pred             cccccCccCCCCceeeeeeccccccccccccEEEEeccCCCceeeehhccCCccccccccCcEEEEEccCceEEeeeecC
Confidence            45666778899998443322211     11334455555555555555555678899988877677778888898887  


Q ss_pred             CCCCce-----eeeccc----cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc-CC
Q psy15995        259 GPPFKF-----KMTKQE----HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP-DG  328 (683)
Q Consensus       259 ~~~~~~-----~~~~~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~  328 (683)
                      .+++..     +..++.    ..-..-.+++..+|++.++.-..++|...|..+|+.+.++..  ....|++++|-- +-
T Consensus       189 ~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eikl--Pt~qitsccFgGkn~  266 (310)
T KOG4499|consen  189 CPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKL--PTPQITSCCFGGKNL  266 (310)
T ss_pred             CCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEc--CCCceEEEEecCCCc
Confidence            555432     222221    112234466677888878777789999999999999999988  578899999964 32


Q ss_pred             CEEEEE
Q psy15995        329 TQLLTA  334 (683)
Q Consensus       329 ~~l~~~  334 (683)
                      ..+++.
T Consensus       267 d~~yvT  272 (310)
T KOG4499|consen  267 DILYVT  272 (310)
T ss_pred             cEEEEE
Confidence            344443

>KOG2444|consensus

Probab=97.46  E-value=0.00049  Score=57.61  Aligned_cols=144  Identities=13%  Similarity=0.067  Sum_probs=87.8

Q ss_pred             EEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEE
Q psy15995        535 LVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCV  614 (683)
Q Consensus       535 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~  614 (683)
                      .+..-+.+|.|.-+++...+...+...-+...   ...-.-+.-+++|+.+|.|.+|..............+-....+.+
T Consensus        32 ~l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~---~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~I  108 (238)
T KOG2444|consen   32 LLRATSADGLVRERKVRKHKESCRSERFIDEG---QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGI  108 (238)
T ss_pred             hhccccCCcccccchhhhhhhhhhhhhhhhcc---eeecccCceEEeecccceEEEecCCccchHHHhhhcccccceecc
Confidence            34445667777777776544433322212211   111123567889999999999998732111111111011222222


Q ss_pred             EecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCC-CCeeEEEEc-cCCeEEEe--eCCCcEEEEeeccC
Q psy15995        615 AWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQ-SQITRLQWL-DNDLLVSV--GQDCNTKIWEIAPF  683 (683)
Q Consensus       615 ~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~-~~v~~l~~~-~~~~l~s~--~~d~~v~vw~~~~~  683 (683)
                      .--.++.+..+++.||.|+.|++.-.+.+...-.  |. .++..+..+ .++.+..+  |.|..++.|+++++
T Consensus       109 p~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~--h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~  179 (238)
T KOG2444|consen  109 PNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQ--HNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKI  179 (238)
T ss_pred             ccccccceeEEeccCCceeeeccccCceeeeecc--ccCCCcceeEEecCCceEEeeccccchhhhhcchhhh
Confidence            3334566888999999999999988777766533  55 566666555 66778877  89999999998763

>KOG2079|consensus

Probab=97.36  E-value=0.0036  Score=64.72  Aligned_cols=104  Identities=18%  Similarity=0.281  Sum_probs=73.2

Q ss_pred             eceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceecc
Q psy15995        362 DQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQG  441 (683)
Q Consensus       362 ~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~  441 (683)
                      ....+..-.+..+++++..|.+...|....-.+...-..-.++|++++|+.+|+.++.|-.+|.|.+||+..++..+.+.
T Consensus        90 ~~v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~  169 (1206)
T KOG2079|consen   90 AGVISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVIT  169 (1206)
T ss_pred             cceeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeee
Confidence            33444444667789999999999988876433333333346789999999999999999999999999999988877663


Q ss_pred             CCCCcceeEEEEe-----CCeEEEEEcCCe
Q psy15995        442 AGHGNQINGMKAT-----GELLYTCGIDDT  466 (683)
Q Consensus       442 ~~~~~~v~~~~~~-----~~~l~~~~~d~~  466 (683)
                       .+..+.+++-+.     +..++++...|.
T Consensus       170 -e~~ap~t~vi~v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  170 -EHGAPVTGVIFVGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             -ecCCccceEEEEEEeCCCcEEEEccCCCc
Confidence             344444443332     334666665555

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=97.35  E-value=0.12  Score=47.55  Aligned_cols=275  Identities=13%  Similarity=0.109  Sum_probs=127.8

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccceeeecccccc----CCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPI----GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE  217 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~  217 (683)
                      ..+..+.|..+..-.++|.. +.  |+...++-..........    .-...++.|..+  ...+++...   ..+...+
T Consensus        17 ~~l~dV~F~d~~~G~~VG~~-g~--il~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~--~g~ivG~~g---~ll~T~D   88 (302)
T PF14870_consen   17 KPLLDVAFVDPNHGWAVGAY-GT--ILKTTDGGKTWQPVSLDLDNPFDYHLNSISFDGN--EGWIVGEPG---LLLHTTD   88 (302)
T ss_dssp             S-EEEEEESSSS-EEEEETT-TE--EEEESSTTSS-EE-----S-----EEEEEEEETT--EEEEEEETT---EEEEESS
T ss_pred             CceEEEEEecCCEEEEEecC-CE--EEEECCCCccccccccCCCccceeeEEEEEecCC--ceEEEcCCc---eEEEecC
Confidence            56778888866666666654 43  344443322222111111    123567777643  333444432   3444445


Q ss_pred             CCCceeeee---cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCC
Q psy15995        218 TGTSVGEIS---GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDG  294 (683)
Q Consensus       218 ~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  294 (683)
                      .|+.-..+.   .-.+....+....++.  ....+..|.|..=.-.-.........-...+..+.-+++|++++++..-.
T Consensus        89 gG~tW~~v~l~~~lpgs~~~i~~l~~~~--~~l~~~~G~iy~T~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~  166 (302)
T PF14870_consen   89 GGKTWERVPLSSKLPGSPFGITALGDGS--AELAGDRGAIYRTTDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGN  166 (302)
T ss_dssp             TTSS-EE----TT-SS-EEEEEEEETTE--EEEEETT--EEEESSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTSS
T ss_pred             CCCCcEEeecCCCCCCCeeEEEEcCCCc--EEEEcCCCcEEEeCCCCCCeeEcccCCcceeEeEEECCCCcEEEEECccc
Confidence            555443332   1223344444444443  33334455554433222223333444557788999999999998887655


Q ss_pred             cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEE
Q psy15995        295 KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL  374 (683)
Q Consensus       295 ~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  374 (683)
                      -..-||.-.......-..  ....|..|.|.|++.+.+. ...|.|+.=+...  ...++.                   
T Consensus       167 ~~~s~~~G~~~w~~~~r~--~~~riq~~gf~~~~~lw~~-~~Gg~~~~s~~~~--~~~~w~-------------------  222 (302)
T PF14870_consen  167 FYSSWDPGQTTWQPHNRN--SSRRIQSMGFSPDGNLWML-ARGGQIQFSDDPD--DGETWS-------------------  222 (302)
T ss_dssp             EEEEE-TT-SS-EEEE----SSS-EEEEEE-TTS-EEEE-ETTTEEEEEE-TT--EEEEE--------------------
T ss_pred             EEEEecCCCccceEEccC--ccceehhceecCCCCEEEE-eCCcEEEEccCCC--Cccccc-------------------
Confidence            556777433222222221  5678999999999776554 4778887766211  111111                   


Q ss_pred             EEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccC--CCCcceeEEE
Q psy15995        375 LTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGA--GHGNQINGMK  452 (683)
Q Consensus       375 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~--~~~~~v~~~~  452 (683)
                                        ++........-.+..++|.+++...++|+. |.+ +.....++.-.....  .-......+.
T Consensus       223 ------------------~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~  282 (302)
T PF14870_consen  223 ------------------EPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENVPSNLYRIV  282 (302)
T ss_dssp             --------------------B-TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGGTTSSS---EEE
T ss_pred             ------------------cccCCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccccCCCCceEEEE
Confidence                              000111112334788999998877776654 433 334445554433322  2345567777


Q ss_pred             Ee-CCeEEEEEcCCeEEEE
Q psy15995        453 AT-GELLYTCGIDDTIKQV  470 (683)
Q Consensus       453 ~~-~~~l~~~~~d~~i~~~  470 (683)
                      |. ++.-+..+.+|.|.-|
T Consensus       283 f~~~~~gf~lG~~G~ll~~  301 (302)
T PF14870_consen  283 FVNPDKGFVLGQDGVLLRY  301 (302)
T ss_dssp             EEETTEEEEE-STTEEEEE
T ss_pred             EcCCCceEEECCCcEEEEe
Confidence            76 7788888899988765

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.35  E-value=0.17  Score=49.45  Aligned_cols=152  Identities=17%  Similarity=0.340  Sum_probs=89.5

Q ss_pred             CCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecC----CCeEEEEeeCCCeEEEEcCC-
Q psy15995        186 GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPS----RPFRIITGSEDNTIAVFEGP-  260 (683)
Q Consensus       186 ~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~l~~~~~d~~i~iw~~~-  260 (683)
                      .++..++|. ||+.++...      .++..-+..---...-+.-..|..+.|.|-    -+ .+++......|.+|.+. 
T Consensus        20 HPvhGlaWT-DGkqVvLT~------L~l~~gE~kfGds~viGqFEhV~GlsW~P~~~~~~p-aLLAVQHkkhVtVWqL~~   91 (671)
T PF15390_consen   20 HPVHGLAWT-DGKQVVLTD------LQLHNGEPKFGDSKVIGQFEHVHGLSWAPPCTADTP-ALLAVQHKKHVTVWQLCP   91 (671)
T ss_pred             ccccceEec-CCCEEEEEe------eeeeCCccccCCccEeeccceeeeeeecCcccCCCC-ceEEEeccceEEEEEecc
Confidence            578889998 555554432      111111110001112344456889999885    33 47777788999999854 


Q ss_pred             ----CCceeeecccc-----ccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC--eeEEeccCCccccCeEEEEEccCCC
Q psy15995        261 ----PFKFKMTKQEH-----SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA--DLVSELGNPAHKGGVYAVAWKPDGT  329 (683)
Q Consensus       261 ----~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~  329 (683)
                          ..+.......+     .---..+.|+|....|++-+....-.++++...  .....+.   ..+.|.|.+|.+||+
T Consensus        92 s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~---~~G~IhCACWT~DG~  168 (671)
T PF15390_consen   92 STTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIK---TSGLIHCACWTKDGQ  168 (671)
T ss_pred             CccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEecc---CCceEEEEEecCcCC
Confidence                23333222111     111245789999998877665544445555433  3344443   677899999999999


Q ss_pred             EEEEEECC-CcEEEEECCCC
Q psy15995        330 QLLTASGD-KTCKLWDIETK  348 (683)
Q Consensus       330 ~l~~~~~d-g~i~iwd~~~~  348 (683)
                      +|+++-.. =.-++||-..+
T Consensus       169 RLVVAvGSsLHSyiWd~~qK  188 (671)
T PF15390_consen  169 RLVVAVGSSLHSYIWDSAQK  188 (671)
T ss_pred             EEEEEeCCeEEEEEecCchh
Confidence            98876543 23568876544

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.35  E-value=0.062  Score=50.79  Aligned_cols=227  Identities=12%  Similarity=0.100  Sum_probs=100.0

Q ss_pred             CCCCeEEEe--cCCeEEEEeCCC----CcccccccC---cc----cceEEEEECCCCcEEEEe--cCC----CCEEEEeC
Q psy15995         54 PKGKNFLYT--NGNSVIIRNIEN----PAISDIYTE---HS----CAVNVAKYSPSGFYIASG--DIS----GKVRIWDT  114 (683)
Q Consensus        54 ~~~~~l~~~--~~~~i~v~~~~~----~~~~~~~~~---h~----~~v~~~~~s~d~~~las~--~~d----g~i~iwd~  114 (683)
                      .+.++|+..  ..+.|+|.|+.+    .++.++++.   +.    ..-..+-.-|+|+.++|+  +.+    |-+.+.|-
T Consensus        85 ~~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~  164 (461)
T PF05694_consen   85 KERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDG  164 (461)
T ss_dssp             --S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-T
T ss_pred             ccCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcC
Confidence            356677776  478999999884    333444332   11    112223334799888874  333    33777776


Q ss_pred             CCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEe--------------------ecCCccEEEEeccccc
Q psy15995        115 VNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIAS--------------------GDISGKVRIWDTVNKE  174 (683)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~--------------------~~~d~~i~iwd~~~~~  174 (683)
                      ++-+.....+......           .---.+-+.|.-+.+++                    +....++.+||+.+.+
T Consensus       165 ~tf~v~g~We~~~~~~-----------~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~  233 (461)
T PF05694_consen  165 ETFEVKGRWEKDRGPQ-----------PFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRK  233 (461)
T ss_dssp             TT--EEEE--SB-TT-----------------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTE
T ss_pred             ccccccceeccCCCCC-----------CCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCc
Confidence            6554443333221111           01112222332223332                    2235689999999999


Q ss_pred             eeeeccccccCCCeeEEEEcC--CCCeEEEEecCCceEEEEEEccCCC----ceeeeec-----------------CCcC
Q psy15995        175 HILKNEFHPIGGPIKDIAWSP--DNQRMVVVGEGRERFGHVFMSETGT----SVGEISG-----------------QSKP  231 (683)
Q Consensus       175 ~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----------------~~~~  231 (683)
                      .++.+.+.........+.|..  +..+-++++.-...++.++..+.++    .+..+..                 -..-
T Consensus       234 ~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~L  313 (461)
T PF05694_consen  234 LLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPL  313 (461)
T ss_dssp             EEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE---
T ss_pred             EeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCc
Confidence            888877765444566777764  4555555555444434444433332    1111111                 1355


Q ss_pred             eEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce-eeecc------------------ccccCeEEEEECCCCCEEEEEc
Q psy15995        232 INSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF-KMTKQ------------------EHSRFVQAVRYSPSGSHFASAG  291 (683)
Q Consensus       232 v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~------------------~~~~~v~~~~~~~~~~~l~~~~  291 (683)
                      |+.+..|.|++++.+++-.+|.++.||+..-.. ...-+                  .-.+...-+..|.||+.|...+
T Consensus       314 itDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn  392 (461)
T PF05694_consen  314 ITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN  392 (461)
T ss_dssp             ---EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred             eEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence            899999999999888888899999999765322 11110                  0112345677788888776654

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.26  E-value=0.36  Score=51.14  Aligned_cols=212  Identities=10%  Similarity=-0.008  Sum_probs=108.7

Q ss_pred             CCCeEEEecCCeEEEEeCCCCcccccccCcccc--------eEEEEEC----------------CCCcEEEEecCCCCEE
Q psy15995         55 KGKNFLYTNGNSVIIRNIENPAISDIYTEHSCA--------VNVAKYS----------------PSGFYIASGDISGKVR  110 (683)
Q Consensus        55 ~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~--------v~~~~~s----------------~d~~~las~~~dg~i~  110 (683)
                      ++.++++..++.|+-.|.++|+.+-.+..+...        -..+++-                .++++++.++.|+.+.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            344444445677888888888766554422110        0112221                1345788888999999


Q ss_pred             EEeCCCcccccccccccCCCCcccceeeee-ecceeeeEeeccceEEEeec----------CCccEEEEeccccceeeec
Q psy15995        111 IWDTVNKEHILKNEFHPIGGPIKDIGTLLS-LTSIRNILVLSIGFYIASGD----------ISGKVRIWDTVNKEHILKN  179 (683)
Q Consensus       111 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~----------~d~~i~iwd~~~~~~~~~~  179 (683)
                      -.|.++|+....+.....-.-...+..... ...+++--.--++ .+++|+          .+|.|+-+|..+|+.+...
T Consensus       274 ALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g-~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~  352 (764)
T TIGR03074       274 ALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGT-TVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW  352 (764)
T ss_pred             EEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECC-EEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence            999999988866532210000000000000 0000110111123 344443          2688999999999988765


Q ss_pred             ccccc-------CC--------Ce-eEEEEcCCCCeEEEEecCC----------------ceEEEEEEccCCCceeeeec
Q psy15995        180 EFHPI-------GG--------PI-KDIAWSPDNQRMVVVGEGR----------------ERFGHVFMSETGTSVGEISG  227 (683)
Q Consensus       180 ~~~~~-------~~--------~i-~~~~~s~~~~~l~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~  227 (683)
                      .....       .+        .+ ..+++.++...++....+.                ...+.-.+.++|+....++.
T Consensus       353 ~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~  432 (764)
T TIGR03074       353 DPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQT  432 (764)
T ss_pred             ecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEecc
Confidence            43210       01        11 3345555555555433211                11133445567777766654


Q ss_pred             CCcCe---------EEEEeec-CCC--eEEEEeeCCCeEEEEcCCCCceeee
Q psy15995        228 QSKPI---------NSCDFKP-SRP--FRIITGSEDNTIAVFEGPPFKFKMT  267 (683)
Q Consensus       228 ~~~~v---------~~~~~~~-~~~--~~l~~~~~d~~i~iw~~~~~~~~~~  267 (683)
                      ....+         .-+.+.. +++  ..++.++.+|.+.++|.++++.+..
T Consensus       433 ~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~  484 (764)
T TIGR03074       433 VHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVP  484 (764)
T ss_pred             cCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEee
Confidence            22211         1122222 442  2588899999999999887775543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>smart00320 WD40 WD40 repeats

Probab=97.26  E-value=0.00087  Score=39.66  Aligned_cols=38  Identities=37%  Similarity=0.523  Sum_probs=32.9

Q ss_pred             ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEe
Q psy15995        263 KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD  300 (683)
Q Consensus       263 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  300 (683)
                      +....+..|...|.++.|.++++.+++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            34555667888999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG2395|consensus

Probab=97.20  E-value=0.024  Score=54.13  Aligned_cols=146  Identities=19%  Similarity=0.193  Sum_probs=98.8

Q ss_pred             CCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCe------EEEEeeCCCeEEEEcCCCCc--eee
Q psy15995        195 PDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPF------RIITGSEDNTIAVFEGPPFK--FKM  266 (683)
Q Consensus       195 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~------~l~~~~~d~~i~iw~~~~~~--~~~  266 (683)
                      .+.+.++..+... .-++-.+.+.|+.+.+..-+.+ |+-+.+.|+.+.      .-+.|-.|..|.-||.+-..  .+.
T Consensus       343 ~dsnlil~~~~~~-~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~  420 (644)
T KOG2395|consen  343 ADSNLILMDGGEQ-DKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLA  420 (644)
T ss_pred             cccceEeeCCCCc-CcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceee
Confidence            3444444444443 3366777889999999988877 788888887643      23456678889999965322  122


Q ss_pred             ecccc----ccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEE
Q psy15995        267 TKQEH----SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKL  342 (683)
Q Consensus       267 ~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  342 (683)
                      ..++|    .....|.+-..+| ++++|+.+|.|++||- .+....+. .|+-..+|..+..+.+|++++..+. ..+.+
T Consensus       421 ~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTA-lPgLG~~I~hVdvtadGKwil~Tc~-tyLlL  496 (644)
T KOG2395|consen  421 VVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTA-LPGLGDAIKHVDVTADGKWILATCK-TYLLL  496 (644)
T ss_pred             eeeccccccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhc-ccccCCceeeEEeeccCcEEEEecc-cEEEE
Confidence            22222    2345666666666 7999999999999996 44443332 2568889999999999998887764 46766


Q ss_pred             EECC
Q psy15995        343 WDIE  346 (683)
Q Consensus       343 wd~~  346 (683)
                      .++.
T Consensus       497 i~t~  500 (644)
T KOG2395|consen  497 IDTL  500 (644)
T ss_pred             EEEe
Confidence            6653

>KOG2079|consensus

Probab=97.18  E-value=0.002  Score=66.42  Aligned_cols=100  Identities=19%  Similarity=0.331  Sum_probs=74.9

Q ss_pred             CCCEEEEEeCCCeEEEEECCCCcc-ccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCC
Q psy15995        575 SNEYLVASDAHRKVVLYRVPDFEL-AHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQS  653 (683)
Q Consensus       575 ~~~~l~~~~~d~~i~i~~~~~~~~-~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~  653 (683)
                      .+-+++.|++.|.+-..|+...-. ......  -.++|++++|+.||+.++.|-.+|.|.+||+..++....+..  |..
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~--v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e--~~a  173 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNER--VQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITE--HGA  173 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhcccchhhcCCc--cCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeee--cCC
Confidence            456789999999999988865311 111111  468899999999999999999999999999999888877754  344


Q ss_pred             CeeEEEEc----cCCeEEEeeCCCcEEEEee
Q psy15995        654 QITRLQWL----DNDLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       654 ~v~~l~~~----~~~~l~s~~~d~~v~vw~~  680 (683)
                      +.+++-+.    ++..++++..-|.  +|++
T Consensus       174 p~t~vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  174 PVTGVIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             ccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence            55555443    5567888888885  6765

>KOG4499|consensus

Probab=97.18  E-value=0.11  Score=44.13  Aligned_cols=133  Identities=13%  Similarity=0.052  Sum_probs=81.5

Q ss_pred             CcEEEEccCCCEEEEEcC---------CCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEE-eCCCeEEEEE-
Q psy15995        524 PSSISLDHEHGLVAVGGA---------DSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVAS-DAHRKVVLYR-  592 (683)
Q Consensus       524 ~~~~~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~~-  592 (683)
                      ...-.++|+|++.+-...         .|.++.|-....-.   .....-+--..++|+.+.+.+... +.+-.|.-|| 
T Consensus       111 ~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~v~---~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dy  187 (310)
T KOG4499|consen  111 LNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQVE---LIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDY  187 (310)
T ss_pred             cccCccCCCCceeeeeeccccccccccccEEEEeccCCCce---eeehhccCCccccccccCcEEEEEccCceEEeeeec
Confidence            345567889988432222         23344443322111   111122334568898887776654 4455676677 


Q ss_pred             -CCCCccccccce---ee----ecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc
Q psy15995        593 -VPDFELAHNKEW---GF----HSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL  661 (683)
Q Consensus       593 -~~~~~~~~~~~~---~~----h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~  661 (683)
                       .++|.+......   ..    ..-..-.++..-+|.+.++.-..++|...|..+++.+..++.  +...|++++|-
T Consensus       188 d~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eikl--Pt~qitsccFg  262 (310)
T KOG4499|consen  188 DCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKL--PTPQITSCCFG  262 (310)
T ss_pred             CCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEc--CCCceEEEEec
Confidence             556554322111   00    111233455666788888888899999999999999999987  67899999998

>KOG4441|consensus

Probab=97.15  E-value=0.071  Score=54.62  Aligned_cols=221  Identities=15%  Similarity=0.165  Sum_probs=126.2

Q ss_pred             CCCEEEEEeCCC------cEEEEcCCCCCcceeccCCCCcceeEEEEe-CCeEEEEEcC------CeEEEEeCCCCcccC
Q psy15995        413 DRGTVFTGSHDG------FITRWNAKTGENDRVQGAGHGNQINGMKAT-GELLYTCGID------DTIKQVDLSSNAYSG  479 (683)
Q Consensus       413 ~~~~l~~~~~dg------~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d------~~i~~~~~~~~~~~~  479 (683)
                      .+..++.|+.++      .+..+|..+++............-.++... +...++|+.|      ..+..||...+.-..
T Consensus       284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~  363 (571)
T KOG4441|consen  284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP  363 (571)
T ss_pred             CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCceec
Confidence            445666777663      578899888866555444444444455555 6666778877      245556665543211


Q ss_pred             CceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCc-----EEEEEcCCCc
Q psy15995        480 PEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSK-----VHIYELNNKS  554 (683)
Q Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~-----i~i~d~~~~~  554 (683)
                      .                                   ..+.. .....-...-+|.+.|+|+.||.     +..||..+.+
T Consensus       364 ~-----------------------------------a~M~~-~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~  407 (571)
T KOG4441|consen  364 V-----------------------------------APMNT-KRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNK  407 (571)
T ss_pred             c-----------------------------------CCccC-ccccceeEEECCEEEEEeccccccccccEEEecCCCCc
Confidence            0                                   00000 00111122346778888988864     8889988887


Q ss_pred             cCcceeecCCcCeeEEE-ECCCCCEEEEEeCC------CeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEee
Q psy15995        555 LSPKAELDHLGPVTDCS-FSPSNEYLVASDAH------RKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGS  627 (683)
Q Consensus       555 ~~~~~~~~~~~~v~~~~-~s~~~~~l~~~~~d------~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~  627 (683)
                      ......+..  +....+ ..-+|+..++|+.+      .++..||..+.+............... ++ .-++.+.+.|+
T Consensus       408 W~~va~m~~--~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a-~~~~~iYvvGG  483 (571)
T KOG4441|consen  408 WTPVAPMLT--RRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFG-VA-VLNGKIYVVGG  483 (571)
T ss_pred             ccccCCCCc--ceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccce-EE-EECCEEEEECC
Confidence            654443322  222222 22367788888754      357889988876654433321111111 22 22678888888


Q ss_pred             cCC-----cEEEEeCCCCceeeEeecCCCCCCeeEEEEccCCeEEEeeCCCc
Q psy15995        628 LDT-----TIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCN  674 (683)
Q Consensus       628 ~d~-----~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~  674 (683)
                      .|+     +|..||..+.+....-..... ..-..++-.++...+.||.||.
T Consensus       484 ~~~~~~~~~VE~ydp~~~~W~~v~~m~~~-rs~~g~~~~~~~ly~vGG~~~~  534 (571)
T KOG4441|consen  484 FDGTSALSSVERYDPETNQWTMVAPMTSP-RSAVGVVVLGGKLYAVGGFDGN  534 (571)
T ss_pred             ccCCCccceEEEEcCCCCceeEcccCccc-cccccEEEECCEEEEEecccCc
Confidence            887     378899888776655433322 2223444457778888888875

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=97.15  E-value=0.16  Score=44.92  Aligned_cols=278  Identities=14%  Similarity=0.119  Sum_probs=154.4

Q ss_pred             cccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcc
Q psy15995        315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTP  394 (683)
Q Consensus       315 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~  394 (683)
                      ..+-+..+.++  +++...+..+.-+++.|+.+.........- +.......+.-.|++..++..+.-+.++|+..+..+
T Consensus        85 ~~~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~l-nt~gyaygv~vsGn~aYVadlddgfLivdvsdpssP  161 (370)
T COG5276          85 ARDLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFL-NTDGYAYGVYVSGNYAYVADLDDGFLIVDVSDPSSP  161 (370)
T ss_pred             hhhhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccc-cCCceEEEEEecCCEEEEeeccCcEEEEECCCCCCc
Confidence            34456677776  456777777777999999876654333211 111334445558999999998888999999987776


Q ss_pred             eeeee--eccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCc-ceeEEEEeCCeEEEEEcCCeEEEEe
Q psy15995        395 IRVIK--GHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGN-QINGMKATGELLYTCGIDDTIKQVD  471 (683)
Q Consensus       395 ~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~-~v~~~~~~~~~l~~~~~d~~i~~~~  471 (683)
                      ...-+  .....-..++.+  |++-..+..|+-+.+-|+...........-..+ .+.++...+++....-.+.-+.+-|
T Consensus       162 ~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~egvlivd  239 (370)
T COG5276         162 QLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYDEGVLIVD  239 (370)
T ss_pred             eeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEcccceEEEe
Confidence            54322  222333455654  567777778999999999876655444333333 6777778777777777777777777


Q ss_pred             CCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCC--CCCcEEEEccCCCEEEEEcCCCcEEEEE
Q psy15995        472 LSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPID--YEPSSISLDHEHGLVAVGGADSKVHIYE  549 (683)
Q Consensus       472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~dg~i~i~d  549 (683)
                      .........                                  .-..+..  ..++.+.++  +++..+...+.-+.+-|
T Consensus       240 ~s~~ssp~~----------------------------------~gsyet~~p~~~s~v~Vs--~~~~Yvadga~gl~~id  283 (370)
T COG5276         240 VSGPSSPTV----------------------------------FGSYETSNPVSISTVPVS--GEYAYVADGAKGLPIID  283 (370)
T ss_pred             cCCCCCceE----------------------------------eeccccCCcccccceecc--cceeeeeccccCceeEe
Confidence            665421110                                  0000111  112222333  44555555566666666


Q ss_pred             cCCCccCccee-ecCCc-CeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEee
Q psy15995        550 LNNKSLSPKAE-LDHLG-PVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGS  627 (683)
Q Consensus       550 ~~~~~~~~~~~-~~~~~-~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~  627 (683)
                      .++..-..... ....+ .-..+..  .+.++..+..+ ...+-+...-+.......  ....+.+.+.+-+.+.+-+..
T Consensus       284 isnp~spfl~ss~~t~g~~a~gi~a--y~~y~yiadkn-~g~vV~~s~~s~m~~~~g--~~ti~~s~~v~~~~q~~y~~d  358 (370)
T COG5276         284 ISNPPSPFLSSSLDTAGYQAAGIRA--YGNYNYIADKN-TGAVVDASPPSMMDKRPG--RPTIGQSCDVSVDTQIIYSTD  358 (370)
T ss_pred             ccCCCCCchhccccCCCccccceEE--ecCeeEeccCC-ceEEEeCCChhhcccccC--cceEeeecceEEEeeEEEEee
Confidence            66543221111 11111 2222222  23445444444 444555544332221111  122233444444566788888


Q ss_pred             cCCcEEEEeCC
Q psy15995        628 LDTTIIIWSLA  638 (683)
Q Consensus       628 ~d~~v~iw~~~  638 (683)
                      .++.+.+|+..
T Consensus       359 ~~~gl~i~~~~  369 (370)
T COG5276         359 YNGGLSIIEYL  369 (370)
T ss_pred             cCCCEEEEEec
Confidence            88889998853

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.12  E-value=0.18  Score=44.76  Aligned_cols=184  Identities=10%  Similarity=0.068  Sum_probs=112.3

Q ss_pred             cEEEEEEeCCCCEEEEEeCCC--cEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEE-cCCeEEEEeCCCCcccCC
Q psy15995        404 PITALALSPDRGTVFTGSHDG--FITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCG-IDDTIKQVDLSSNAYSGP  480 (683)
Q Consensus       404 ~v~~~~~~~~~~~l~~~~~dg--~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~~~~~~~~~~~~~  480 (683)
                      -...+.|..++.++-+.+.-|  .|+.+|+.+++...........---.+...++.++--. .++...+||..+.     
T Consensus        46 FTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl-----  120 (264)
T PF05096_consen   46 FTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPNTL-----  120 (264)
T ss_dssp             EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETTTT-----
T ss_pred             cCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccccc-----
Confidence            355678877888878887766  79999999998776654444444445555566665544 5778888888764     


Q ss_pred             ceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCccee
Q psy15995        481 EVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE  560 (683)
Q Consensus       481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  560 (683)
                                                      +.+..++.+.+-+.++  .|++.|+.......++++|..+.+......
T Consensus       121 --------------------------------~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~  166 (264)
T PF05096_consen  121 --------------------------------KKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQ  166 (264)
T ss_dssp             --------------------------------EEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE
T ss_pred             --------------------------------eEEEEEecCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEE
Confidence                                            2333444445566666  566677777777889999988776554444


Q ss_pred             ec-CC---cCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceee-------------ecccEEEEEecCCCCeE
Q psy15995        561 LD-HL---GPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGF-------------HSAKVNCVAWSPDSALV  623 (683)
Q Consensus       561 ~~-~~---~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-------------h~~~v~~~~~s~d~~~l  623 (683)
                      .. ..   ..++.+.+- +|...|=.=....|...|..+|++.....+.+             ...-.+.+|+.|+.+.|
T Consensus       167 V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l  245 (264)
T PF05096_consen  167 VTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRL  245 (264)
T ss_dssp             -EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEE
T ss_pred             EEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEE
Confidence            32 22   235556664 67777766677788888888887754332211             13457899998876555


Q ss_pred             EEee
Q psy15995        624 ASGS  627 (683)
Q Consensus       624 ~~~~  627 (683)
                      ...+
T Consensus       246 ~vTG  249 (264)
T PF05096_consen  246 FVTG  249 (264)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            4444

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=97.07  E-value=0.29  Score=46.56  Aligned_cols=72  Identities=21%  Similarity=0.221  Sum_probs=44.7

Q ss_pred             cCCcCeeEEEECC-------CCCEEEEEeCCCeEEEEECCCC-ccccccce-eeecccEEEEEecCCCCeEEEeecCCcE
Q psy15995        562 DHLGPVTDCSFSP-------SNEYLVASDAHRKVVLYRVPDF-ELAHNKEW-GFHSAKVNCVAWSPDSALVASGSLDTTI  632 (683)
Q Consensus       562 ~~~~~v~~~~~s~-------~~~~l~~~~~d~~i~i~~~~~~-~~~~~~~~-~~h~~~v~~~~~s~d~~~l~~~~~d~~v  632 (683)
                      .+...++.+.|-.       .|.++++.-..+.|....+... +......+ ......+..+++.|||.+.++.+.+|.|
T Consensus       250 ~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~i  329 (331)
T PF07995_consen  250 PPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKI  329 (331)
T ss_dssp             TTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTE
T ss_pred             cCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeE
Confidence            3445667777753       4567777766778888887644 32211111 1134479999999999999988888877


Q ss_pred             E
Q psy15995        633 I  633 (683)
Q Consensus       633 ~  633 (683)
                      +
T Consensus       330 y  330 (331)
T PF07995_consen  330 Y  330 (331)
T ss_dssp             E
T ss_pred             e
Confidence            4

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.07  E-value=0.56  Score=49.77  Aligned_cols=111  Identities=18%  Similarity=0.291  Sum_probs=71.8

Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeeccccccC--------eEEEEEC----------------CCCCEEEEEcCCCcEEEE
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTKQEHSRF--------VQAVRYS----------------PSGSHFASAGFDGKVFLY  299 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~--------v~~~~~~----------------~~~~~l~~~~~dg~i~iw  299 (683)
                      .++.++.++.|.-.|..+++.+-.+......        .+.+++.                ..+..++.++.|+.+.-.
T Consensus       196 ~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiAL  275 (764)
T TIGR03074       196 TLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLIAL  275 (764)
T ss_pred             EEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEEEE
Confidence            4777777788888888888877665432210        1223332                134478888899999999


Q ss_pred             eCCCCeeEEeccCCccccCe-------------EEEEEcc--CCCEEEEEEC----------CCcEEEEECCCCceeeEE
Q psy15995        300 DGASADLVSELGNPAHKGGV-------------YAVAWKP--DGTQLLTASG----------DKTCKLWDIETKSVVSEF  354 (683)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~i-------------~~~~~~~--~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~  354 (683)
                      |.++|+....+..   .+.+             ..+.-.|  .+..+++++.          +|.|+-+|.++++.+-++
T Consensus       276 DA~TGk~~W~fg~---~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~  352 (764)
T TIGR03074       276 DADTGKLCEDFGN---NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW  352 (764)
T ss_pred             ECCCCCEEEEecC---CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence            9999998877642   1111             0111112  2345666643          588999999999999888


Q ss_pred             Eec
Q psy15995        355 IMG  357 (683)
Q Consensus       355 ~~~  357 (683)
                      ...
T Consensus       353 ~~g  355 (764)
T TIGR03074       353 DPG  355 (764)
T ss_pred             ecC
Confidence            654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.06  E-value=0.044  Score=48.38  Aligned_cols=140  Identities=12%  Similarity=0.112  Sum_probs=88.0

Q ss_pred             EecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeee
Q psy15995         61 YTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLS  140 (683)
Q Consensus        61 ~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (683)
                      +=..+...+||.++.+.+.++.-. +.=+.++  .||+.|+..+....|.++|..+-+...++.....+.++        
T Consensus       106 TWk~~~~f~yd~~tl~~~~~~~y~-~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv--------  174 (264)
T PF05096_consen  106 TWKEGTGFVYDPNTLKKIGTFPYP-GEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPV--------  174 (264)
T ss_dssp             ESSSSEEEEEETTTTEEEEEEE-S-SS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---------
T ss_pred             EecCCeEEEEccccceEEEEEecC-CcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEEC--------
Confidence            336789999999998887776532 2234555  67777777777778999999888777777666544433        


Q ss_pred             ecceeeeEeeccceEEEeecCCccEEEEeccccceeeecccc-------------ccCCCeeEEEEcCCCCeEEEEecCC
Q psy15995        141 LTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFH-------------PIGGPIKDIAWSPDNQRMVVVGEGR  207 (683)
Q Consensus       141 ~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------------~~~~~i~~~~~s~~~~~l~~~~~~~  207 (683)
                       ..++.+.+- +|...|-.=....|...|..+|+......+.             +...-.+.+|+.|+.+.+.+.+..-
T Consensus       175 -~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~W  252 (264)
T PF05096_consen  175 -SNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKLW  252 (264)
T ss_dssp             ---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT-
T ss_pred             -CCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCCC
Confidence             345555554 5666666666677888888888755433221             1135678999999999999988776


Q ss_pred             ceEEEE
Q psy15995        208 ERFGHV  213 (683)
Q Consensus       208 ~~~~~~  213 (683)
                      ..+..|
T Consensus       253 p~lyeV  258 (264)
T PF05096_consen  253 PKLYEV  258 (264)
T ss_dssp             SEEEEE
T ss_pred             CceEEE
Confidence            544444

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PHA02713 hypothetical protein; Provisional

Probab=97.01  E-value=0.11  Score=53.34  Aligned_cols=218  Identities=9%  Similarity=0.052  Sum_probs=108.4

Q ss_pred             eEEEEcCCCCceeeeccccccCe-EEEEECCCCCEEEEEcCC------CcEEEEeCCCCeeEEeccCCccccCeEEEEEc
Q psy15995        253 TIAVFEGPPFKFKMTKQEHSRFV-QAVRYSPSGSHFASAGFD------GKVFLYDGASADLVSELGNPAHKGGVYAVAWK  325 (683)
Q Consensus       253 ~i~iw~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~  325 (683)
                      .+..||..+.+....-.-..... .+++ .-++...+.|+.+      ..+..||..+......-..+...... +++ .
T Consensus       273 ~v~~yd~~~~~W~~l~~mp~~r~~~~~a-~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~-~~~-~  349 (557)
T PHA02713        273 CILVYNINTMEYSVISTIPNHIINYASA-IVDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRF-SLA-V  349 (557)
T ss_pred             CEEEEeCCCCeEEECCCCCccccceEEE-EECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhce-eEE-E
Confidence            46778876665433211111111 1222 2356667777753      34778898877654332221111111 222 2


Q ss_pred             cCCCEEEEEECCC-----cEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCC-------------------
Q psy15995        326 PDGTQLLTASGDK-----TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSG-------------------  381 (683)
Q Consensus       326 ~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-------------------  381 (683)
                      -+++..+.|+.++     .+..||..+.+....-...... ........++...++|+.++                   
T Consensus       350 ~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r-~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~  428 (557)
T PHA02713        350 IDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIAL-SSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDT  428 (557)
T ss_pred             ECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCccc-ccccEEEECCEEEEEeCCCcccccccccccccccccccc
Confidence            2577777777654     3788998876543221111111 11122334677777776542                   


Q ss_pred             ----cEEEEecCCCC-cceeeeeeccccEEEEEEeCCCCEEEEEeCC------CcEEEEcCCC-CCcceeccCCCC-cce
Q psy15995        382 ----FISYLDVNNPS-TPIRVIKGHNKPITALALSPDRGTVFTGSHD------GFITRWNAKT-GENDRVQGAGHG-NQI  448 (683)
Q Consensus       382 ----~i~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~~w~~~~-~~~~~~~~~~~~-~~v  448 (683)
                          .+..||+.... ..+..+...... .+++ .-+++..+.|+.+      ..+..||..+ .+.......... ...
T Consensus       429 ~~~~~ve~YDP~td~W~~v~~m~~~r~~-~~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~  506 (557)
T PHA02713        429 HSSNKVIRYDTVNNIWETLPNFWTGTIR-PGVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSAL  506 (557)
T ss_pred             cccceEEEECCCCCeEeecCCCCccccc-CcEE-EECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccc
Confidence                46677776432 111111111111 1122 2255666677654      2467899887 555433322222 233


Q ss_pred             eEEEEeCCeEEEEEcCC--eEEEEeCCCCc
Q psy15995        449 NGMKATGELLYTCGIDD--TIKQVDLSSNA  476 (683)
Q Consensus       449 ~~~~~~~~~l~~~~~d~--~i~~~~~~~~~  476 (683)
                      ......+...++|+.++  .+..||..+++
T Consensus       507 ~~~~~~~~iyv~Gg~~~~~~~e~yd~~~~~  536 (557)
T PHA02713        507 HTILHDNTIMMLHCYESYMLQDTFNVYTYE  536 (557)
T ss_pred             eeEEECCEEEEEeeecceeehhhcCccccc
Confidence            33344477778888887  56667766654

>KOG4441|consensus

Probab=97.00  E-value=0.16  Score=52.05  Aligned_cols=227  Identities=15%  Similarity=0.197  Sum_probs=124.8

Q ss_pred             EEEEeeCC------CeEEEEcCCCCceeeeccc-cccCeEEEEECCCCCEEEEEcCC------CcEEEEeCCCCeeEEec
Q psy15995        244 RIITGSED------NTIAVFEGPPFKFKMTKQE-HSRFVQAVRYSPSGSHFASAGFD------GKVFLYDGASADLVSEL  310 (683)
Q Consensus       244 ~l~~~~~d------~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~  310 (683)
                      +++.|+.+      ..+..+|..+.+......- ....-.+++.. ++...++|+.|      .++..||..+++.....
T Consensus       287 l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a  365 (571)
T KOG4441|consen  287 LVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVA  365 (571)
T ss_pred             EEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCceeccC
Confidence            56777776      3677888777644332222 12222333333 45677888888      35788898888765533


Q ss_pred             cCCccccCeEEEEEccCCCEEEEEECCCc-----EEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCC----
Q psy15995        311 GNPAHKGGVYAVAWKPDGTQLLTASGDKT-----CKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSG----  381 (683)
Q Consensus       311 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g----  381 (683)
                      ........ .+++. -+|...++|+.||.     +..||..+.+....-.... .....-....++...++|+.++    
T Consensus       366 ~M~~~R~~-~~v~~-l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~-~r~~~gv~~~~g~iYi~GG~~~~~~~  442 (571)
T KOG4441|consen  366 PMNTKRSD-FGVAV-LDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLT-RRSGHGVAVLGGKLYIIGGGDGSSNC  442 (571)
T ss_pred             CccCcccc-ceeEE-ECCEEEEEeccccccccccEEEecCCCCcccccCCCCc-ceeeeEEEEECCEEEEEcCcCCCccc
Confidence            22111111 12222 25778888888864     7778887765432222222 2333334445788888887554    


Q ss_pred             --cEEEEecCCCCc-ceeeeeeccccEEEEEEeCCCCEEEEEeCCCc-----EEEEcCCCCCcceeccCCCCcceeEEEE
Q psy15995        382 --FISYLDVNNPST-PIRVIKGHNKPITALALSPDRGTVFTGSHDGF-----ITRWNAKTGENDRVQGAGHGNQINGMKA  453 (683)
Q Consensus       382 --~i~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-----i~~w~~~~~~~~~~~~~~~~~~v~~~~~  453 (683)
                        .+..||.....- .+..+....... .++. -++...+.|+.|+.     |..||..+.+............-..+..
T Consensus       443 l~sve~YDP~t~~W~~~~~M~~~R~~~-g~a~-~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~  520 (571)
T KOG4441|consen  443 LNSVECYDPETNTWTLIAPMNTRRSGF-GVAV-LNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVV  520 (571)
T ss_pred             cceEEEEcCCCCceeecCCcccccccc-eEEE-ECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEE
Confidence              467777765321 111111111111 1222 25677778887763     7789998887766654333333333444


Q ss_pred             e-CCeEEEEEcCC-----eEEEEeCCCCc
Q psy15995        454 T-GELLYTCGIDD-----TIKQVDLSSNA  476 (683)
Q Consensus       454 ~-~~~l~~~~~d~-----~i~~~~~~~~~  476 (683)
                      . +...+.|+.|+     ++..||..++.
T Consensus       521 ~~~~ly~vGG~~~~~~l~~ve~ydp~~d~  549 (571)
T KOG4441|consen  521 LGGKLYAVGGFDGNNNLNTVECYDPETDT  549 (571)
T ss_pred             ECCEEEEEecccCccccceeEEcCCCCCc
Confidence            4 66667777665     45566655543

>KOG2395|consensus

Probab=96.98  E-value=0.016  Score=55.28  Aligned_cols=147  Identities=15%  Similarity=0.166  Sum_probs=97.9

Q ss_pred             CCCCCEEE-EEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCC-------EEEEEECCCcEEEEECCCCce-e
Q psy15995        281 SPSGSHFA-SAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGT-------QLLTASGDKTCKLWDIETKSV-V  351 (683)
Q Consensus       281 ~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~l~~~~~dg~i~iwd~~~~~~-~  351 (683)
                      ..+.++|+ .+.....++-.|++.|+.+.....  +.. |.-+.+.|+.+       .-+.|-.+..|.-||++-... .
T Consensus       342 ~~dsnlil~~~~~~~~l~klDIE~GKIVeEWk~--~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~k  418 (644)
T KOG2395|consen  342 RADSNLILMDGGEQDKLYKLDIERGKIVEEWKF--EDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNK  418 (644)
T ss_pred             ccccceEeeCCCCcCcceeeecccceeeeEeec--cCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcce
Confidence            33444444 455566788889999999998875  443 77777777643       124455677899999884332 1


Q ss_pred             eEEEecCc---ceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEE
Q psy15995        352 SEFIMGNQ---VEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITR  428 (683)
Q Consensus       352 ~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~  428 (683)
                      ......++   .............++++|+.+|.|++||. .+......+.+-..+|..+..+.+|++++..+ +..+.+
T Consensus       419 l~~~q~kqy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlL  496 (644)
T KOG2395|consen  419 LAVVQSKQYSTKNNFSCFATTESGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLL  496 (644)
T ss_pred             eeeeeccccccccccceeeecCCceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEE
Confidence            11111111   11122222336779999999999999998 43555566788889999999999999988765 456666


Q ss_pred             EcCC
Q psy15995        429 WNAK  432 (683)
Q Consensus       429 w~~~  432 (683)
                      -++.
T Consensus       497 i~t~  500 (644)
T KOG2395|consen  497 IDTL  500 (644)
T ss_pred             EEEe
Confidence            6543

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.97  E-value=0.44  Score=46.84  Aligned_cols=180  Identities=13%  Similarity=0.146  Sum_probs=104.5

Q ss_pred             cCeEEEEECCCCCEEEEEc--CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccC----CCEEEEEECCCcEEEEECC
Q psy15995        273 RFVQAVRYSPSGSHFASAG--FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPD----GTQLLTASGDKTCKLWDIE  346 (683)
Q Consensus       273 ~~v~~~~~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~~~~~dg~i~iwd~~  346 (683)
                      .++..++|....+.+++.-  .+|.+++=|   ...+..+      .-|..++|.|-    ...|++......|.+|.+.
T Consensus        20 HPvhGlaWTDGkqVvLT~L~l~~gE~kfGd---s~viGqF------EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~   90 (671)
T PF15390_consen   20 HPVHGLAWTDGKQVVLTDLQLHNGEPKFGD---SKVIGQF------EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLC   90 (671)
T ss_pred             ccccceEecCCCEEEEEeeeeeCCccccCC---ccEeecc------ceeeeeeecCcccCCCCceEEEeccceEEEEEec
Confidence            4677888874333344332  234443322   2233333      35889999984    3356666667889999885


Q ss_pred             C-----CceeeE----EEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEE
Q psy15995        347 T-----KSVVSE----FIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTV  417 (683)
Q Consensus       347 ~-----~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  417 (683)
                      .     ++.+..    +....+.-.....++|....+++-+....-.++++......++.--...+.|.|.+|.+||+.|
T Consensus        91 ~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RL  170 (671)
T PF15390_consen   91 PSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRL  170 (671)
T ss_pred             cCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEE
Confidence            2     222222    1112233445666777888888887777767777765555444333456789999999999988


Q ss_pred             EEEeCC-CcEEEEcCCCCCcceecc---CCCCcceeEEEEe-CCeEEEE
Q psy15995        418 FTGSHD-GFITRWNAKTGENDRVQG---AGHGNQINGMKAT-GELLYTC  461 (683)
Q Consensus       418 ~~~~~d-g~i~~w~~~~~~~~~~~~---~~~~~~v~~~~~~-~~~l~~~  461 (683)
                      +++-.. =.-++||-..........   ..-...|.++... +..++.+
T Consensus       171 VVAvGSsLHSyiWd~~qKtL~~CsfcPVFdv~~~Icsi~AT~dsqVAva  219 (671)
T PF15390_consen  171 VVAVGSSLHSYIWDSAQKTLHRCSFCPVFDVGGYICSIEATVDSQVAVA  219 (671)
T ss_pred             EEEeCCeEEEEEecCchhhhhhCCcceeecCCCceEEEEEeccceEEEE
Confidence            866433 245788865543221111   1234466666666 3334433

>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]

Probab=96.96  E-value=0.43  Score=46.59  Aligned_cols=275  Identities=10%  Similarity=0.000  Sum_probs=131.2

Q ss_pred             cCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCC-cCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC
Q psy15995        184 IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQS-KPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF  262 (683)
Q Consensus       184 ~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~  262 (683)
                      ...+|..+.+...|.+-+. ..++   ...++..+++.+..-.... .+|..+..+-.++  +..|+.+| +.+.+.+..
T Consensus       163 ~d~~V~aLv~D~~g~lWvg-T~dG---L~~fd~~~gkalql~s~~~dk~I~al~~d~qg~--LWVGTdqG-v~~~e~~G~  235 (671)
T COG3292         163 KDTPVVALVFDANGRLWVG-TPDG---LSYFDAGRGKALQLASPPLDKAINALIADVQGR--LWVGTDQG-VYLQEAEGW  235 (671)
T ss_pred             cCccceeeeeeccCcEEEe-cCCc---ceEEccccceEEEcCCCcchhhHHHHHHHhcCc--EEEEeccc-eEEEchhhc
Confidence            3477888999888865444 3332   5667776776665544443 6777777777775  77787766 666665442


Q ss_pred             ceeeecc-ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEE
Q psy15995        263 KFKMTKQ-EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCK  341 (683)
Q Consensus       263 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  341 (683)
                      +...... -....|..+.-..+| .+-.|+.+|..+.--.+.+-.....+....-..|.++....+|. |-+++.+|.++
T Consensus       236 ~~sn~~~~lp~~~I~ll~qD~qG-~lWiGTenGl~r~~l~rq~Lq~~~~~~~l~~S~vnsL~~D~dGs-LWv~t~~giv~  313 (671)
T COG3292         236 RASNWGPMLPSGNILLLVQDAQG-ELWIGTENGLWRTRLPRQGLQIPLSKMHLGVSTVNSLWLDTDGS-LWVGTYGGIVR  313 (671)
T ss_pred             cccccCCCCcchheeeeecccCC-CEEEeecccceeEecCCCCccccccccCCccccccceeeccCCC-EeeeccCceEE
Confidence            2211111 122334444444444 34556655544333222222222222111234556666666665 56666666555


Q ss_pred             EEECCCCceeeEEEecCcceeceEEEEe--cCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEE
Q psy15995        342 LWDIETKSVVSEFIMGNQVEDQQVSCLW--QGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFT  419 (683)
Q Consensus       342 iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  419 (683)
                      +-+.+ ......+..............+  ....+-.....|.+.+-+...+.............|+.+++..++ .+-.
T Consensus       314 ~~~a~-w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~sv~q~Rg~nit~~~~d~~g-~lWl  391 (671)
T COG3292         314 YLTAD-WKRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRSVHQLRGMNITTTLEDSRG-RLWL  391 (671)
T ss_pred             Eecch-hhheeeeecCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEEEEeeeccccccchhhhccCC-cEEE
Confidence            43322 1111111111111111111111  111111112222222222222222212222233556667776644 4455


Q ss_pred             EeCCCcEEEEcCCC-CCcceeccCCCCcceeEEEEe-CCeEEEEEcCCeEEE
Q psy15995        420 GSHDGFITRWNAKT-GENDRVQGAGHGNQINGMKAT-GELLYTCGIDDTIKQ  469 (683)
Q Consensus       420 ~~~dg~i~~w~~~~-~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~  469 (683)
                      ++...-+..|+..+ +............+|..+-.+ .+.|..++.+|.++.
T Consensus       392 gs~q~GLsrl~n~n~~avlde~agl~ss~V~aived~dnsLWIGTs~Glvk~  443 (671)
T COG3292         392 GSMQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPDNSLWIGTSGGLVKR  443 (671)
T ss_pred             EecccchhhhccCCcccccccccCCcccceeeeeecCCCCEEEeccCCeEec
Confidence            55554466676666 333333333355677777766 555888888887654

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.94  E-value=0.0034  Score=38.50  Aligned_cols=33  Identities=24%  Similarity=0.347  Sum_probs=29.4

Q ss_pred             ccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc
Q psy15995         85 SCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE  118 (683)
Q Consensus        85 ~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~  118 (683)
                      ...|.+++|+|...+||.++.+|.|.++.+ +++
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q   43 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ   43 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence            456999999999999999999999999998 443

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.93  E-value=0.003  Score=38.73  Aligned_cols=34  Identities=26%  Similarity=0.729  Sum_probs=30.0

Q ss_pred             cccEEEEEecCCCCeEEEeecCCcEEEEeCCCCce
Q psy15995        608 SAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAK  642 (683)
Q Consensus       608 ~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~  642 (683)
                      ...|..++|+|...+||.++.||.|.+|.+ +++.
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            457999999999999999999999999999 4443

>PHA02713 hypothetical protein; Provisional

Probab=96.91  E-value=0.14  Score=52.73  Aligned_cols=192  Identities=10%  Similarity=-0.003  Sum_probs=101.7

Q ss_pred             EEEEeeCC------CeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCC-----cEEEEeCCCCeeEEeccC
Q psy15995        244 RIITGSED------NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDG-----KVFLYDGASADLVSELGN  312 (683)
Q Consensus       244 ~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~  312 (683)
                      +.+.|+.+      ..+..||..+.+....-.-....-......-+|+..+.|+.++     .+..||..+.+....-..
T Consensus       306 IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~m  385 (557)
T PHA02713        306 IIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDM  385 (557)
T ss_pred             EEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEEECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCC
Confidence            56777653      3467788766654322111111111122233667777787654     488899887765543322


Q ss_pred             CccccCeEEEEEccCCCEEEEEECCC-----------------------cEEEEECCCCceeeEEEecCcceeceEEEEe
Q psy15995        313 PAHKGGVYAVAWKPDGTQLLTASGDK-----------------------TCKLWDIETKSVVSEFIMGNQVEDQQVSCLW  369 (683)
Q Consensus       313 ~~~~~~i~~~~~~~~~~~l~~~~~dg-----------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  369 (683)
                      +........+.  -+++..+.|+.++                       .+..||..+.+....-..... ....-....
T Consensus       386 p~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~-r~~~~~~~~  462 (557)
T PHA02713        386 PIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTG-TIRPGVVSH  462 (557)
T ss_pred             CcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCcc-cccCcEEEE
Confidence            11111122222  2577777776542                       467788877654322111111 112223344


Q ss_pred             cCCEEEEEecC------CcEEEEecCC--CCcceeeeeeccccEEEEEEeCCCCEEEEEeCCC--cEEEEcCCCCCccee
Q psy15995        370 QGDYLLTVSLS------GFISYLDVNN--PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDG--FITRWNAKTGENDRV  439 (683)
Q Consensus       370 ~~~~l~~~~~~------g~i~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~~w~~~~~~~~~~  439 (683)
                      ++...++|+.+      ..+..||...  ....+..+.........+.+  +++..++|+.++  .+..||..+.+....
T Consensus       463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~  540 (557)
T PHA02713        463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWNHI  540 (557)
T ss_pred             CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCcccccccch
Confidence            66666777654      2367788875  23333333333332222222  678888998888  788888888776655


Q ss_pred             c
Q psy15995        440 Q  440 (683)
Q Consensus       440 ~  440 (683)
                      .
T Consensus       541 ~  541 (557)
T PHA02713        541 C  541 (557)
T ss_pred             h
Confidence            4

>KOG2280|consensus

Probab=96.82  E-value=0.22  Score=50.26  Aligned_cols=215  Identities=12%  Similarity=0.084  Sum_probs=113.6

Q ss_pred             CCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEe--ccCCccccCeEEEEEccCC
Q psy15995        251 DNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSE--LGNPAHKGGVYAVAWKPDG  328 (683)
Q Consensus       251 d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~  328 (683)
                      --.|+||+. +|+.+..+.-....+..+.|+.+.. |++...+|++++|++- |+.+..  ...+.....|..+.+..+|
T Consensus        63 ~~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~-ge~ie~~svg~e~~~~~I~ec~~f~~G  139 (829)
T KOG2280|consen   63 RPYIRIFNI-SGQLLGRILWKHGELIGMGWSDDEE-LICVQKDGTVHVYGLL-GEFIESNSVGFESQMSDIVECRFFHNG  139 (829)
T ss_pred             ceeEEEEec-cccchHHHHhcCCCeeeecccCCce-EEEEeccceEEEeecc-hhhhcccccccccccCceeEEEEecCc
Confidence            345788885 4555554444444788999998875 6667789999999964 333333  2222344456666666555


Q ss_pred             CEEEEEECCCcEEEEECCCCceeeEEEe--cCcceeceEEEEecCC---EEEEEecCCcEEEEecCCCCcceeeeeeccc
Q psy15995        329 TQLLTASGDKTCKLWDIETKSVVSEFIM--GNQVEDQQVSCLWQGD---YLLTVSLSGFISYLDVNNPSTPIRVIKGHNK  403 (683)
Q Consensus       329 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~  403 (683)
                      -.+++  .+|.+.+-+-.......+...  .......++.+..++.   .++-....-...++...........+.....
T Consensus       140 Vavlt--~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~q~~~~~~~~~  217 (829)
T KOG2280|consen  140 VAVLT--VSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRVQLHALSWPNS  217 (829)
T ss_pred             eEEEe--cCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceecccccccccCCCCc
Confidence            43333  445555443222222222211  1112223444443322   1111110111111222221222222222345


Q ss_pred             cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEE
Q psy15995        404 PITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQV  470 (683)
Q Consensus       404 ~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~  470 (683)
                      .+..+.+||+.++|+-=...|.|.+-+....+....+.......-..+.|.|+--++.+.+..+.+.
T Consensus       218 ~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~qm~WcgndaVvl~~e~~l~lv  284 (829)
T KOG2280|consen  218 SVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPPKQMAWCGNDAVVLSWEVNLMLV  284 (829)
T ss_pred             eEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCchHhceeecCCceEEEEeeeEEEE
Confidence            6788999999999999889999999888777665555433334444667765544444444444433

>PRK13684 Ycf48-like protein; Provisional

Probab=96.75  E-value=0.55  Score=44.77  Aligned_cols=180  Identities=14%  Similarity=0.127  Sum_probs=95.2

Q ss_pred             CCeEEEecCCeEEEEeCCCCcccccc-cCcccceEEEEECCCCcEEEEecCCCCEEE-EeCCCcccccccccccCCCCcc
Q psy15995         56 GKNFLYTNGNSVIIRNIENPAISDIY-TEHSCAVNVAKYSPSGFYIASGDISGKVRI-WDTVNKEHILKNEFHPIGGPIK  133 (683)
Q Consensus        56 ~~~l~~~~~~~i~v~~~~~~~~~~~~-~~h~~~v~~~~~s~d~~~las~~~dg~i~i-wd~~~~~~~~~~~~~~~~~~~~  133 (683)
                      +..++++..+.|.. ..+.++.-..+ .+-...+.++.+.|++.+++++.. |.+.. +| ..++.-.....        
T Consensus       143 ~~~~~~g~~G~i~~-S~DgG~tW~~~~~~~~g~~~~i~~~~~g~~v~~g~~-G~i~~s~~-~gg~tW~~~~~--------  211 (334)
T PRK13684        143 GTAEMATNVGAIYR-TTDGGKNWEALVEDAAGVVRNLRRSPDGKYVAVSSR-GNFYSTWE-PGQTAWTPHQR--------  211 (334)
T ss_pred             CcceeeeccceEEE-ECCCCCCceeCcCCCcceEEEEEECCCCeEEEEeCC-ceEEEEcC-CCCCeEEEeeC--------
Confidence            33445554444433 23334333222 233567899999999988877654 44332 22 11111111110        


Q ss_pred             cceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeecccc--ccCCCeeEEEEcCCCCeEEEEecCCceEE
Q psy15995        134 DIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFH--PIGGPIKDIAWSPDNQRMVVVGEGRERFG  211 (683)
Q Consensus       134 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~~~~~~~  211 (683)
                           .....+..+.+.++++.++++. .|.+++=....++.-.....+  .....+.++.+.|+++.++++..+    .
T Consensus       212 -----~~~~~l~~i~~~~~g~~~~vg~-~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G~~G----~  281 (334)
T PRK13684        212 -----NSSRRLQSMGFQPDGNLWMLAR-GGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWAGGGNG----T  281 (334)
T ss_pred             -----CCcccceeeeEcCCCCEEEEec-CCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEEEEcCCC----e
Confidence                 0115678888999988776654 566543233443321111111  112457889999988765554433    2


Q ss_pred             EEEEccCCCceeeee---cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEc
Q psy15995        212 HVFMSETGTSVGEIS---GQSKPINSCDFKPSRPFRIITGSEDNTIAVFE  258 (683)
Q Consensus       212 ~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~  258 (683)
                      .+...+.|+.-....   .-......+.|..++.  .+..+..|.|..++
T Consensus       282 v~~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~--~~~~G~~G~il~~~  329 (334)
T PRK13684        282 LLVSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEK--GFVLGQRGVLLRYV  329 (334)
T ss_pred             EEEeCCCCCCCeECCcCCCCCcceEEEEEeCCCc--eEEECCCceEEEec
Confidence            334445555444432   2234577888887765  45566678887775

>KOG3630|consensus

Probab=96.74  E-value=0.029  Score=58.75  Aligned_cols=148  Identities=19%  Similarity=0.170  Sum_probs=103.1

Q ss_pred             CCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCc-----eeeee------cCCcCeEEEEeecCCCeEEEEeeCCCeE
Q psy15995        186 GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTS-----VGEIS------GQSKPINSCDFKPSRPFRIITGSEDNTI  254 (683)
Q Consensus       186 ~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~d~~i  254 (683)
                      -++..+...+|++..++....++..+..++.++-..     ..-+.      ....-..++.|+|.-+...+....|+.|
T Consensus       101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl  180 (1405)
T KOG3630|consen  101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL  180 (1405)
T ss_pred             ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence            456777888888888888777677788888764211     11122      2234456888999877678888899999


Q ss_pred             EEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCc--cccCeEEEEEccCCCEEE
Q psy15995        255 AVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPA--HKGGVYAVAWKPDGTQLL  332 (683)
Q Consensus       255 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~  332 (683)
                      ++..+........--.-....++++|+|.|+.++.|-..|++.-|.. .++....+..+.  ....|.+++|.....+++
T Consensus       181 ~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P-~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflv  259 (1405)
T KOG3630|consen  181 RVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP-SLEIKSEIPEPPVEENYRVLSVTWLSTQEFLV  259 (1405)
T ss_pred             hhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeec-ccceeecccCCCcCCCcceeEEEEecceeEEE
Confidence            99876544333332335567899999999999999999999999874 445444444332  246899999987666655


Q ss_pred             EE
Q psy15995        333 TA  334 (683)
Q Consensus       333 ~~  334 (683)
                      +-
T Consensus       260 vy  261 (1405)
T KOG3630|consen  260 VY  261 (1405)
T ss_pred             Ee
Confidence            53

>KOG2444|consensus

Probab=96.72  E-value=0.0057  Score=51.50  Aligned_cols=108  Identities=8%  Similarity=0.069  Sum_probs=71.6

Q ss_pred             CCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeE-EEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeec-c
Q psy15995        532 EHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTD-CSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHS-A  609 (683)
Q Consensus       532 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~-~  609 (683)
                      -+..+++|+.+|.|++|..................|.+ +.--.++.+..++..+|.|+.|++.-.+.+...-  .|. .
T Consensus        69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g--~h~~~  146 (238)
T KOG2444|consen   69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVG--QHNFE  146 (238)
T ss_pred             cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeec--cccCC
Confidence            45678999999999999886332221222112222222 2333356688899999999999998777654322  255 5


Q ss_pred             cEEEEEecCCCCeEEEe--ecCCcEEEEeCCCCc
Q psy15995        610 KVNCVAWSPDSALVASG--SLDTTIIIWSLASPA  641 (683)
Q Consensus       610 ~v~~~~~s~d~~~l~~~--~~d~~v~iw~~~~~~  641 (683)
                      ++..+..+..+++|+.+  |.|..++.|++..-.
T Consensus       147 ~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~~  180 (238)
T KOG2444|consen  147 SGEELIVVGSDEFLKIADTSHDRVLKKWNVEKIK  180 (238)
T ss_pred             CcceeEEecCCceEEeeccccchhhhhcchhhhh
Confidence            66666666677788877  788888888886544

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=96.62  E-value=0.76  Score=44.61  Aligned_cols=270  Identities=15%  Similarity=0.129  Sum_probs=146.6

Q ss_pred             ceEEEeecCCccEEEEeccccc-----eeeeccccccCCCeeEEEEcC-----CCCeEEEEecCCceEEEEEEcc--CCC
Q psy15995        153 GFYIASGDISGKVRIWDTVNKE-----HILKNEFHPIGGPIKDIAWSP-----DNQRMVVVGEGRERFGHVFMSE--TGT  220 (683)
Q Consensus       153 ~~~l~~~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~i~~~~~s~-----~~~~l~~~~~~~~~~~~~~~~~--~~~  220 (683)
                      ...|++|+..|.++||+...++     .+....+   ..+|..+..-+     +...||+.....   +.++...  .|.
T Consensus        37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l---~~PILqv~~G~F~s~~~~~~LaVLhP~k---l~vY~v~~~~g~  110 (418)
T PF14727_consen   37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQL---KDPILQVECGKFVSGSEDLQLAVLHPRK---LSVYSVSLVDGT  110 (418)
T ss_pred             ccEEEEeccccEEEEEccCCCCCCCccEEEEEec---CCcEEEEEeccccCCCCcceEEEecCCE---EEEEEEEecCCC
Confidence            3589999999999999996644     2223332   36777776543     345666665554   3333332  121


Q ss_pred             -------ceeeeecCCcC--eEEEEeec----CCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEE
Q psy15995        221 -------SVGEISGQSKP--INSCDFKP----SRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHF  287 (683)
Q Consensus       221 -------~~~~~~~~~~~--v~~~~~~~----~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  287 (683)
                             .+..+..|.-.  ...++.-|    .++..+..-+.||.+.+|+-+.......+.. .--...+.|.+..+.+
T Consensus       111 ~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsf  189 (418)
T PF14727_consen  111 VEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSF  189 (418)
T ss_pred             cccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEE
Confidence                   22233333322  22333322    2244688899999999999777665555543 3334457888888899


Q ss_pred             EEEcCCCcEEEEeCCCC--------------------e---eEEeccCCccccCeEEEEE---ccCCCEEEEEECCCcEE
Q psy15995        288 ASAGFDGKVFLYDGASA--------------------D---LVSELGNPAHKGGVYAVAW---KPDGTQLLTASGDKTCK  341 (683)
Q Consensus       288 ~~~~~dg~i~iw~~~~~--------------------~---~~~~~~~~~~~~~i~~~~~---~~~~~~l~~~~~dg~i~  341 (683)
                      ++++.+..+..|....-                    +   ...++.   -...+..+..   +.....+++-++ ..+.
T Consensus       190 vt~sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~n---lGE~~l~i~v~~~~~~~~~IvvLge-r~Lf  265 (418)
T PF14727_consen  190 VTASSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFN---LGEQALDIQVVRFSSSESDIVVLGE-RSLF  265 (418)
T ss_pred             EEecCceeEEEecHHHhhhccccccccccccccccccccccceeEEE---CCceeEEEEEEEcCCCCceEEEEec-ceEE
Confidence            99998888888864211                    0   001111   1233444433   223334444443 4566


Q ss_pred             EEECCCCceeeEEEecCcceeceEEEE---ecC---CEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEE---EeC
Q psy15995        342 LWDIETKSVVSEFIMGNQVEDQQVSCL---WQG---DYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALA---LSP  412 (683)
Q Consensus       342 iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~  412 (683)
                      ..+.. |.................-..   ..+   ..+++++.++.+.+|.-..-.   -..+....+| ++.   +..
T Consensus       266 ~l~~~-G~l~~~krLd~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d~~L~---WsA~l~~~PV-al~v~~~~~  340 (418)
T PF14727_consen  266 CLKDN-GSLRFQKRLDYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYEDTTLV---WSAQLPHVPV-ALSVANFNG  340 (418)
T ss_pred             EEcCC-CeEEEEEecCCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEeCCeEE---EecCCCCCCE-EEEecccCC
Confidence            66553 444433333222222221111   122   258999999999888644200   0000011122 222   333


Q ss_pred             CCCEEEEEeCCCcEEEEcCCCCCcce
Q psy15995        413 DRGTVFTGSHDGFITRWNAKTGENDR  438 (683)
Q Consensus       413 ~~~~l~~~~~dg~i~~w~~~~~~~~~  438 (683)
                      -...+++-+.+|.+.+--+.+.....
T Consensus       341 ~~G~IV~Ls~~G~L~v~YLGTdPs~~  366 (418)
T PF14727_consen  341 LKGLIVSLSDEGQLSVSYLGTDPSLF  366 (418)
T ss_pred             CCceEEEEcCCCcEEEEEeCCCCccc
Confidence            45678888889999988777665443

>PRK13684 Ycf48-like protein; Provisional

Probab=96.57  E-value=0.74  Score=43.90  Aligned_cols=270  Identities=11%  Similarity=0.113  Sum_probs=126.4

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccceeeecc---ccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc-
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNE---FHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE-  217 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~-  217 (683)
                      ....++.|..+.+-+|+|. +|.  ||...++-......   .......+.++.|.++ ... +++..    ..++..+ 
T Consensus        46 ~~l~~v~F~d~~~g~avG~-~G~--il~T~DgG~tW~~~~~~~~~~~~~l~~v~~~~~-~~~-~~G~~----g~i~~S~D  116 (334)
T PRK13684         46 ANLLDIAFTDPNHGWLVGS-NRT--LLETNDGGETWEERSLDLPEENFRLISISFKGD-EGW-IVGQP----SLLLHTTD  116 (334)
T ss_pred             CceEEEEEeCCCcEEEEEC-CCE--EEEEcCCCCCceECccCCcccccceeeeEEcCC-cEE-EeCCC----ceEEEECC
Confidence            4677788886666666665 343  44333322111111   1112244677888654 333 33333    2233333 


Q ss_pred             CCCceeeee---cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc-eeeeccccccCeEEEEECCCCCEEEEEcCC
Q psy15995        218 TGTSVGEIS---GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK-FKMTKQEHSRFVQAVRYSPSGSHFASAGFD  293 (683)
Q Consensus       218 ~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  293 (683)
                      .|+.-..+.   ........+.....+.  +...+..|.|..=+ +.++ .......-...+..+.+.|++.+++++. .
T Consensus       117 gG~tW~~~~~~~~~~~~~~~i~~~~~~~--~~~~g~~G~i~~S~-DgG~tW~~~~~~~~g~~~~i~~~~~g~~v~~g~-~  192 (334)
T PRK13684        117 GGKNWTRIPLSEKLPGSPYLITALGPGT--AEMATNVGAIYRTT-DGGKNWEALVEDAAGVVRNLRRSPDGKYVAVSS-R  192 (334)
T ss_pred             CCCCCeEccCCcCCCCCceEEEEECCCc--ceeeeccceEEEEC-CCCCCceeCcCCCcceEEEEEECCCCeEEEEeC-C
Confidence            333322221   1111122222222222  23334445443332 1222 1111222345788999999987766665 5


Q ss_pred             CcEEEE-eCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEec---CcceeceEEEEe
Q psy15995        294 GKVFLY-DGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMG---NQVEDQQVSCLW  369 (683)
Q Consensus       294 g~i~iw-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~  369 (683)
                      |.+..- + ..++.-..+. ......+.++.+.++++.++++ ..|.+++=....+..-......   .......+.+.+
T Consensus       193 G~i~~s~~-~gg~tW~~~~-~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~  269 (334)
T PRK13684        193 GNFYSTWE-PGQTAWTPHQ-RNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRT  269 (334)
T ss_pred             ceEEEEcC-CCCCeEEEee-CCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCccccccCCccccccceeeEEEcC
Confidence            655432 2 2222222222 1255688999999998876654 5576543234444433322211   112233445555


Q ss_pred             cCCEEEEEecCCcEEEEecCCCCcceeee---eeccccEEEEEEeCCCCEEEEEeCCCcEEEEcC
Q psy15995        370 QGDYLLTVSLSGFISYLDVNNPSTPIRVI---KGHNKPITALALSPDRGTVFTGSHDGFITRWNA  431 (683)
Q Consensus       370 ~~~~l~~~~~~g~i~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~  431 (683)
                      ++. +++++.+|.+..- ... ...-...   ..-......+.+..+++.+++| ..|.|..++-
T Consensus       270 ~~~-~~~~G~~G~v~~S-~d~-G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~G~il~~~~  330 (334)
T PRK13684        270 PGE-IWAGGGNGTLLVS-KDG-GKTWEKDPVGEEVPSNFYKIVFLDPEKGFVLG-QRGVLLRYVG  330 (334)
T ss_pred             CCC-EEEEcCCCeEEEe-CCC-CCCCeECCcCCCCCcceEEEEEeCCCceEEEC-CCceEEEecC
Confidence            555 4555556655432 221 2211111   1122357777777776665554 6788877653

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=96.28  E-value=1.1  Score=42.83  Aligned_cols=245  Identities=13%  Similarity=0.158  Sum_probs=111.6

Q ss_pred             eeeeccccccCCCeeEEEEc-----------CCCCeEEEEecCCceEEEEEEccC----CCceeeeec---CC----cCe
Q psy15995        175 HILKNEFHPIGGPIKDIAWS-----------PDNQRMVVVGEGRERFGHVFMSET----GTSVGEISG---QS----KPI  232 (683)
Q Consensus       175 ~~~~~~~~~~~~~i~~~~~s-----------~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~---~~----~~v  232 (683)
                      .+....+..........-|+           .+.++|++-+-...+ +++.+..+    .+..+.+..   +.    ...
T Consensus        54 VIhrl~mp~~GDElHH~GWNaCSsc~~~~~~~~Rr~Li~PgL~Ssr-IyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~P  132 (461)
T PF05694_consen   54 VIHRLPMPNRGDELHHSGWNACSSCHYGDPSKERRYLILPGLRSSR-IYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRP  132 (461)
T ss_dssp             EEEEEE-SSS---B---EES--GGSTT--TT--S-EEEEEBTTT---EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEE
T ss_pred             EEEEEeCCCCCCccccccCcccccccCCCCcccCCcEEeeeeccCc-EEEEECCCCCCCCceEeeeCHHHHHhhcCCCCC
Confidence            33334444334455556665           245677776655443 56666552    222333322   11    122


Q ss_pred             EEEEeecCCCeEEEEe------eCCCeEEEEcCCCCceeeecccc---ccCeEEEEECCCCCEEEEEcC-----------
Q psy15995        233 NSCDFKPSRPFRIITG------SEDNTIAVFEGPPFKFKMTKQEH---SRFVQAVRYSPSGSHFASAGF-----------  292 (683)
Q Consensus       233 ~~~~~~~~~~~~l~~~------~~d~~i~iw~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~-----------  292 (683)
                      ..+---|+|+. ++++      ..-|.+.+.|.++.+........   ...-..+-|.|..+.+++...           
T Consensus       133 HT~Hclp~G~i-mIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~  211 (461)
T PF05694_consen  133 HTVHCLPDGRI-MISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFN  211 (461)
T ss_dssp             EEEEE-SS--E-EEEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---
T ss_pred             ceeeecCCccE-EEEeccCCCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCC
Confidence            23444567764 4443      22356888888887777665432   233456778888888887652           


Q ss_pred             ---------CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccC--CCE-EEEEECCCcEEEEEC-CCCceee----EEE
Q psy15995        293 ---------DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPD--GTQ-LLTASGDKTCKLWDI-ETKSVVS----EFI  355 (683)
Q Consensus       293 ---------dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~-l~~~~~dg~i~iwd~-~~~~~~~----~~~  355 (683)
                               ..++.+||+.+.+.++.+...........+.|..+  ..+ ++.+....+|..|-- +.++...    ++.
T Consensus       212 ~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip  291 (461)
T PF05694_consen  212 PEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIP  291 (461)
T ss_dssp             TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE-
T ss_pred             hhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECC
Confidence                     25799999999999999987544445677888654  333 444444455555543 4443221    111


Q ss_pred             ec----C------------cceeceEEEEecCCEEEEEe-cCCcEEEEecCCCCcceeeeeec-----------------
Q psy15995        356 MG----N------------QVEDQQVSCLWQGDYLLTVS-LSGFISYLDVNNPSTPIRVIKGH-----------------  401 (683)
Q Consensus       356 ~~----~------------~~~~~~~~~~~~~~~l~~~~-~~g~i~~~~~~~~~~~~~~~~~~-----------------  401 (683)
                      ..    .            +.-...+..+.++++|.+.. ..|.++.||+..+..+...-+-.                 
T Consensus       292 ~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~  371 (461)
T PF05694_consen  292 AKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKR  371 (461)
T ss_dssp             -EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS----
T ss_pred             CcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccc
Confidence            11    0            12234566677888887766 58999999999887765543211                 


Q ss_pred             -cccEEEEEEeCCCCEEEEEe
Q psy15995        402 -NKPITALALSPDRGTVFTGS  421 (683)
Q Consensus       402 -~~~v~~~~~~~~~~~l~~~~  421 (683)
                       .+...-+..|-||+.|+...
T Consensus       372 l~GgPqMvqlS~DGkRlYvTn  392 (461)
T PF05694_consen  372 LRGGPQMVQLSLDGKRLYVTN  392 (461)
T ss_dssp             --S----EEE-TTSSEEEEE-
T ss_pred             cCCCCCeEEEccCCeEEEEEe
Confidence             11235677777888777653

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>KOG3630|consensus

Probab=96.23  E-value=0.092  Score=55.32  Aligned_cols=146  Identities=13%  Similarity=0.122  Sum_probs=91.0

Q ss_pred             CCCCcEEEEccCCCEEEEEcC--CCcEEEEEcCCCccCcc---e-------eecCCcCeeEEEECCCCC-EEEEEeCCCe
Q psy15995        521 DYEPSSISLDHEHGLVAVGGA--DSKVHIYELNNKSLSPK---A-------ELDHLGPVTDCSFSPSNE-YLVASDAHRK  587 (683)
Q Consensus       521 ~~~~~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~---~-------~~~~~~~v~~~~~s~~~~-~l~~~~~d~~  587 (683)
                      ..++..+...+|+...++...  +-.|..||++.-.....   .       .........++.|.|.-. ..++...|+.
T Consensus       100 ~~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dls  179 (1405)
T KOG3630|consen  100 EIPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLS  179 (1405)
T ss_pred             cccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccc
Confidence            345667777788766555443  33788999876433211   0       011233455677777432 3455667888


Q ss_pred             EEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEe-ecCCCCCCeeEEEEc-cCCe
Q psy15995        588 VVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIII-KNAHPQSQITRLQWL-DNDL  665 (683)
Q Consensus       588 i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~-~~~~~~~~v~~l~~~-~~~~  665 (683)
                      |++..+......... +. -....++++|+|.|+.++.|...|++.-|...-....... ........|.+|+|. ...+
T Consensus       180 l~V~~~~~~~~~v~s-~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~ef  257 (1405)
T KOG3630|consen  180 LRVKSTKQLAQNVTS-FP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEF  257 (1405)
T ss_pred             hhhhhhhhhhhhhcc-cC-cccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeE
Confidence            998887654333222 11 4567899999999999999999999999986543222111 111125789999999 4455


Q ss_pred             EEE
Q psy15995        666 LVS  668 (683)
Q Consensus       666 l~s  668 (683)
                      |++
T Consensus       258 lvv  260 (1405)
T KOG3630|consen  258 LVV  260 (1405)
T ss_pred             EEE
Confidence            554

>PRK10115 protease 2; Provisional

Probab=96.20  E-value=2.2  Score=45.38  Aligned_cols=243  Identities=14%  Similarity=0.074  Sum_probs=116.1

Q ss_pred             CeeEEEEcCCCCeEEEEecCC---ceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCC-----CeEEEEc
Q psy15995        187 PIKDIAWSPDNQRMVVVGEGR---ERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSED-----NTIAVFE  258 (683)
Q Consensus       187 ~i~~~~~s~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~i~iw~  258 (683)
                      .+..+.++||+++++.+.+..   ...+.+.+..+|..+...-....  ..++|.++++.++++...+     ..|..++
T Consensus       128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~  205 (686)
T PRK10115        128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT  205 (686)
T ss_pred             EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence            466788999999988875432   23355666666754333222222  4699999998655554432     3677777


Q ss_pred             CCCC--ceeeeccccccCeE-EEEECCCCCEEEEEcC---CCcEEEEeCC--CCeeEEeccCCccccCeEEEEEccCCCE
Q psy15995        259 GPPF--KFKMTKQEHSRFVQ-AVRYSPSGSHFASAGF---DGKVFLYDGA--SADLVSELGNPAHKGGVYAVAWKPDGTQ  330 (683)
Q Consensus       259 ~~~~--~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~---dg~i~iw~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~  330 (683)
                      +.+.  +-...+........ ....+.++++++..+.   ++.+.+++..  +++....+..  ..+....+. +. +..
T Consensus       206 lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~-~~-~~~  281 (686)
T PRK10115        206 IGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPR--RKDHEYSLD-HY-QHR  281 (686)
T ss_pred             CCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEEC--CCCCEEEEE-eC-CCE
Confidence            7776  33333333223233 3344557886654433   4578888842  3332222221  222222222 22 234


Q ss_pred             EEEEECC--Cc--EEEEECCCCceeeEEEec-CcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeee-ecccc
Q psy15995        331 LLTASGD--KT--CKLWDIETKSVVSEFIMG-NQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIK-GHNKP  404 (683)
Q Consensus       331 l~~~~~d--g~--i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~-~~~~~  404 (683)
                      ++..+..  ..  |...++........+... .......+.+. .+..++....+|.-+++-+.........+. .....
T Consensus       282 ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~  360 (686)
T PRK10115        282 FYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAY  360 (686)
T ss_pred             EEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEEEEEcCCCCceEEecCCCCce
Confidence            4433332  22  333344421222233322 12233333333 334455555566655554433222223222 11222


Q ss_pred             EEEEEEe--CCCC-EEEEEe---CCCcEEEEcCCCCCc
Q psy15995        405 ITALALS--PDRG-TVFTGS---HDGFITRWNAKTGEN  436 (683)
Q Consensus       405 v~~~~~~--~~~~-~l~~~~---~dg~i~~w~~~~~~~  436 (683)
                      +..+..+  +++. .+++.+   .-+.+..+|+.+++.
T Consensus       361 ~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~~  398 (686)
T PRK10115        361 VTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGER  398 (686)
T ss_pred             EeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCcE
Confidence            3333344  3433 333332   246788888877653

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=96.18  E-value=1.8  Score=44.32  Aligned_cols=371  Identities=14%  Similarity=0.094  Sum_probs=165.2

Q ss_pred             cceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccC-CCCcccceeeeeecceeeeEeec-----cceEEEee
Q psy15995         86 CAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPI-GGPIKDIGTLLSLTSIRNILVLS-----IGFYIASG  159 (683)
Q Consensus        86 ~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~s~-----~~~~l~~~  159 (683)
                      ..-..++..|.|+.++.+..++.+.|+-++.. .......... ..++      .....|..++|..     +...+|.-
T Consensus        44 ~~G~~l~vDP~~R~i~v~a~e~~~~v~~l~~~-~~~~~~~~~~~~~pi------~s~~~i~~~~FL~~~~~~~~p~la~L  116 (504)
T PF10433_consen   44 QPGQYLAVDPSGRCIAVSAYEGNFLVYPLNRS-LDSDIAFSPHINSPI------KSEGNILDMCFLHPSVGYDNPTLAIL  116 (504)
T ss_dssp             TT--EEEE-TTSSEEEEEEBTTEEEEEE-SS-----T-TT---EEEE--------S-SEEEEEEEES---S-SS-EEEEE
T ss_pred             cCCcEEEECCcCCEEEEEecCCeEEEEEeccc-ccccccccccccccc------cCCceEEEEEEEecccCCCCceEEEE
Confidence            34457888999999999999999999998871 0000000000 0000      1135677777775     22233332


Q ss_pred             --cC--CccEEEEe--ccccceee--ecccc-----ccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEc-cC--CC-ce
Q psy15995        160 --DI--SGKVRIWD--TVNKEHIL--KNEFH-----PIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMS-ET--GT-SV  222 (683)
Q Consensus       160 --~~--d~~i~iwd--~~~~~~~~--~~~~~-----~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~-~~--~~-~~  222 (683)
                        ..  ...+..++  ...+....  +....     ....+..-+........+++++..    ..++.. ..  +. ..
T Consensus       117 ~~~~~~~~~~~~y~w~~~~~l~~~~~~~~~~~~l~~~~~~p~~LIPlp~~~ggllV~~~~----~i~y~~~~~~~~~~~~  192 (504)
T PF10433_consen  117 YVDSQRRTHLVTYEWSLDDGLNHVISKSTLPIRLPNEDELPSFLIPLPNPPGGLLVGGEN----IIIYKNHLIGSGDYSF  192 (504)
T ss_dssp             EEETT-EEEEEEEE--------EETTTTEEEE--EEEE-TTEEEEEE-TTT-SEEEEESS----EEEEEE------TTEE
T ss_pred             EEEecccceeEEEeeecccccceeeeeccccccccccCCCccEEEEcCCCCcEEEEECCE----EEEEeccccccccccc
Confidence              12  22244444  33321100  01111     011122222222223445555544    233331 11  11 11


Q ss_pred             eeeec----CCcCeEEEEe------ecCCCeEEEEeeCCCeEEEEcCCCCce--eeecccc-ccCeEEEEECCCC-CEEE
Q psy15995        223 GEISG----QSKPINSCDF------KPSRPFRIITGSEDNTIAVFEGPPFKF--KMTKQEH-SRFVQAVRYSPSG-SHFA  288 (683)
Q Consensus       223 ~~~~~----~~~~v~~~~~------~~~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~-~~~v~~~~~~~~~-~~l~  288 (683)
                      .....    ...-+.+...      .......++.+.++|.+....+.....  ....-+. .....++.+..+| .+|+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf  272 (504)
T PF10433_consen  193 LSIPSPPSSSSSLWTSWARPERNISYDKDGDRILLQDEDGDLYLLTLDNDGGSISITYLGTLCSIASSLTYLKNGGDYLF  272 (504)
T ss_dssp             EEE--H-HHHTS-EEEEEE------SSTTSSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE--S-ESEEEEESTT--EEE
T ss_pred             ccccCCccCCCceEEEEEeccccceecCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCcCChhheEEEEcCCCEEEE
Confidence            11111    1222333332      223333688899999998887654331  2222222 3445566666665 3666


Q ss_pred             EEcC--CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccC----CC------EEEEEEC---CCcEEEEECCCCceee-
Q psy15995        289 SAGF--DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPD----GT------QLLTASG---DKTCKLWDIETKSVVS-  352 (683)
Q Consensus       289 ~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~------~l~~~~~---dg~i~iwd~~~~~~~~-  352 (683)
                      .|+.  |+.+.-|....-+.+..+.   .-++|.+++..+.    ..      .+++++.   +|.+++..-  |-... 
T Consensus       273 ~gs~~gds~l~~~~~~~l~~~~~~~---N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~--Gi~~~~  347 (504)
T PF10433_consen  273 VGSEFGDSQLLQISLSNLEVLDSLP---NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRN--GIGIEG  347 (504)
T ss_dssp             EEESSS-EEEEEEESESEEEEEEE-------SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEE--SBEEE-
T ss_pred             EEEecCCcEEEEEeCCCcEEEEecc---CcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEec--cCCcee
Confidence            6765  4556666655556666665   6678999988531    21      5666653   667887743  22222 


Q ss_pred             -EEEecCcc-eeceEEEEec---CCEEEEEecCCcEEEEecC--CCCcceeee-----eeccccEEEEEEeCCCCEEEEE
Q psy15995        353 -EFIMGNQV-EDQQVSCLWQ---GDYLLTVSLSGFISYLDVN--NPSTPIRVI-----KGHNKPITALALSPDRGTVFTG  420 (683)
Q Consensus       353 -~~~~~~~~-~~~~~~~~~~---~~~l~~~~~~g~i~~~~~~--~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~  420 (683)
                       ......-. ....+.....   ..+++....+ .-.++.+.  .....+...     ......+.+-.+ . +..++=.
T Consensus       348 ~~~~~~~l~~v~~iW~l~~~~~~~~~lv~S~~~-~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~-~-~~~ivQV  424 (504)
T PF10433_consen  348 LELASSELPGVTGIWTLKLSSSDHSYLVLSFPN-ETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNV-G-DGRIVQV  424 (504)
T ss_dssp             -EEEEEEESTEEEEEEE-SSSSSBSEEEEEESS-EEEEEEES----SSEEEEE---TS-SSS-EEEEEEE-T-TTEEEEE
T ss_pred             eeeeccCCCCceEEEEeeecCCCceEEEEEcCC-ceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEc-C-CCeEEEE
Confidence             11111111 1112222211   3455555544 44455543  112222111     111112222222 2 3444444


Q ss_pred             eCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCc
Q psy15995        421 SHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNA  476 (683)
Q Consensus       421 ~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~  476 (683)
                      .. ..|++.+....+............|.+.+..+.+++.+..++.+..+.+....
T Consensus       425 t~-~~i~l~~~~~~~~~~~w~~~~~~~I~~a~~~~~~v~v~~~~~~~~~~~~~~~~  479 (504)
T PF10433_consen  425 TP-KGIRLIDLEDGKLTQEWKPPAGSIIVAASINDPQVLVALSGGELVYFELDDNK  479 (504)
T ss_dssp             ES-SEEEEEESSSTSEEEEEE-TTS---SEEEESSSEEEEEE-TTEEEEEEEETTE
T ss_pred             ec-CeEEEEECCCCeEEEEEeCCCCCeEEEEEECCCEEEEEEeCCcEEEEEEECCc
Confidence            33 34888887777766655555777888888888899988889999988877653

...

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=96.07  E-value=1.5  Score=42.51  Aligned_cols=148  Identities=14%  Similarity=0.115  Sum_probs=81.8

Q ss_pred             eEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEE
Q psy15995         88 VNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRI  167 (683)
Q Consensus        88 v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~i  167 (683)
                      ...+..++||++++.+.....++-||-.... -.....             .....+..+.+.+++..++++. .|.+ +
T Consensus       241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~-W~~~~~-------------~~~~~l~~v~~~~dg~l~l~g~-~G~l-~  304 (398)
T PLN00033        241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPY-WQPHNR-------------ASARRIQNMGWRADGGLWLLTR-GGGL-Y  304 (398)
T ss_pred             eeeEEEcCCCCEEEEECCccEEEecCCCCcc-eEEecC-------------CCccceeeeeEcCCCCEEEEeC-CceE-E
Confidence            4456678888888877654334445432210 000000             1115577888888988777664 4443 3


Q ss_pred             Eeccccc-----eeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeee---cCCcCeEEEEeec
Q psy15995        168 WDTVNKE-----HILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS---GQSKPINSCDFKP  239 (683)
Q Consensus       168 wd~~~~~-----~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~  239 (683)
                      |....++     .............+.++.|.++++.++++..+    ..+...+.|+.-....   .-....+.+.|.+
T Consensus       305 ~S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~~G----~v~~s~D~G~tW~~~~~~~~~~~~ly~v~f~~  380 (398)
T PLN00033        305 VSKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAGGSG----ILLRSTDGGKSWKRDKGADNIAANLYSVKFFD  380 (398)
T ss_pred             EecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEECCC----cEEEeCCCCcceeEccccCCCCcceeEEEEcC
Confidence            3333332     11222222122458899999888876666554    3334444455433332   3345688999888


Q ss_pred             CCCeEEEEeeCCCeEEEE
Q psy15995        240 SRPFRIITGSEDNTIAVF  257 (683)
Q Consensus       240 ~~~~~l~~~~~d~~i~iw  257 (683)
                      +++  ....+.+|.|.-|
T Consensus       381 ~~~--g~~~G~~G~il~~  396 (398)
T PLN00033        381 DKK--GFVLGNDGVLLRY  396 (398)
T ss_pred             CCc--eEEEeCCcEEEEe
Confidence            765  5566667877654

>KOG3616|consensus

Probab=95.98  E-value=0.71  Score=46.61  Aligned_cols=343  Identities=17%  Similarity=0.233  Sum_probs=161.5

Q ss_pred             ccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCcee
Q psy15995        272 SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVV  351 (683)
Q Consensus       272 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  351 (683)
                      ...++++.-+|.++.++.+..||.|++|+...........   ...+-..+.|...|  |++...|+.+.-|.-. |-..
T Consensus        14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~---~~~p~~nlv~tnhg--l~~~tsdrr~la~~~d-gvvq   87 (1636)
T KOG3616|consen   14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICE---EAKPKENLVFTNHG--LVTATSDRRALAWKED-GVVQ   87 (1636)
T ss_pred             cceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhh---hcCCccceeeeccc--eEEEeccchhheeecc-Ccch
Confidence            4457788889999999999999999999976554322111   22234455565433  6777778877777533 3333


Q ss_pred             eEEEecC--cceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEE
Q psy15995        352 SEFIMGN--QVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRW  429 (683)
Q Consensus       352 ~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w  429 (683)
                      +.+....  ........|.|..+. ++|+.-|.+.-+|.--...    +....-..+-++             -..|.+-
T Consensus        88 qqfdyndqsekefss~~cdptaqn-vvgtlcggv~q~dcclrr~----i~knkfe~tyv~-------------pshvilk  149 (1636)
T KOG3616|consen   88 QQFDYNDQSEKEFSSILCDPTAQN-VVGTLCGGVEQFDCCLRRG----ILKNKFELTYVA-------------PSHVILK  149 (1636)
T ss_pred             hhccccchhhhhccceecCchhhh-hhhhhccceeeehHHHHhH----HHhccceeEEec-------------cceeeee
Confidence            3332221  112223334343322 2233333344443211000    000000011110             1223344


Q ss_pred             cCCCCCcceeccCCCCcceeEEEEe-CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeee-cCCeEEEEEeceEE
Q psy15995        430 NAKTGENDRVQGAGHGNQINGMKAT-GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDI-DENTLVTVTVKQIS  507 (683)
Q Consensus       430 ~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  507 (683)
                      |+.++...... ....-.|..+... .+..+.+....+|.+-|+.++.+......-.+......+ ..+.........+.
T Consensus       150 dlsn~trt~l~-s~~g~aidelkilgkdryli~~ts~siii~d~es~rfsei~wqgsgg~ekfffd~~n~cli~nagelt  228 (1636)
T KOG3616|consen  150 DLSNDTRTNLI-SHKGLAIDELKILGKDRYLIAHTSESIIIADLESNRFSEIAWQGSGGHEKFFFDFENCCLIFNAGELT  228 (1636)
T ss_pred             cccCCceEeee-ecCCcchhhhhhccccceEEeeccccEEEeecccchhhhhhcccCCCcceeeeecCcEEEEEecCeeE
Confidence            44444332222 1122233333333 345556666777888888887776655542222222222 22233333333443


Q ss_pred             EEeCCce--eeeec---CCCCCcEEE------------E-ccCCCEEEEE--cCCCcEEEE-------------------
Q psy15995        508 IVENGAK--VSSLP---IDYEPSSIS------------L-DHEHGLVAVG--GADSKVHIY-------------------  548 (683)
Q Consensus       508 ~~~~~~~--~~~~~---~~~~~~~~~------------~-~~~~~~l~~~--~~dg~i~i~-------------------  548 (683)
                      +.+.+..  +....   ......++.            | +.+...++--  -..|.|++|                   
T Consensus       229 lveyg~d~slg~vrte~~nphlisvqike~~qksygrnfdse~n~~~a~~~di~tgqicvfsdflqrrtssvffiikaka  308 (1636)
T KOG3616|consen  229 LVEYGNDDSLGSVRTEFMNPHLISVQIKEACQKSYGRNFDSEDNKKLAEHIDIKTGQICVFSDFLQRRTSSVFFIIKAKA  308 (1636)
T ss_pred             EEEecCCCcchhhhhhhcCceeeehHHHHHHHHhhCCCCCcchhhhHHHHhccccCceeeehhhhhhccccceeeehhhh
Confidence            3332211  00000   000000000            0 0000000000  011223332                   


Q ss_pred             ---------------EcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEE
Q psy15995        549 ---------------ELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNC  613 (683)
Q Consensus       549 ---------------d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~  613 (683)
                                     |+-+++..  ..+.|.+.|.-+.+...+..|..-+..-.+.++|+.+.+......      -++-
T Consensus       309 kifndlqlphi~ipvdli~g~~~--~~inh~~~vdwielne~~~kllfrdkk~kl~l~di~s~qksmiln------fcsy  380 (1636)
T KOG3616|consen  309 KIFNDLQLPHIAIPVDLIGGQNE--GFINHEGAVDWIELNERAHKLLFRDKKLKLHLVDIESCQKSMILN------FCSY  380 (1636)
T ss_pred             hhcccccCcceeeeeecccCccc--ccccccccccceeccchhhhhhcccccceeEEEEcccchHHHHHH------Hhhh
Confidence                           22222211  123467777777777777777777777778899988765432222      2456


Q ss_pred             EEecCCCCeEEEeecCCcEEEEeCCCCceeeEee
Q psy15995        614 VAWSPDSALVASGSLDTTIIIWSLASPAKHIIIK  647 (683)
Q Consensus       614 ~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~  647 (683)
                      +.|-|-+..++.-+.|+.-..|+++.++.+..++
T Consensus       381 mqwvp~sdvivaqn~dnl~iwyn~d~peqvt~~k  414 (1636)
T KOG3616|consen  381 MQWVPGSDVIVAQNGDNLCIWYNIDAPEQVTMFK  414 (1636)
T ss_pred             heeccCcceEEecCCCceEEEecCCcchhheeeE
Confidence            7899988888877777644445676666665554

>KOG2280|consensus

Probab=95.91  E-value=2.3  Score=43.48  Aligned_cols=222  Identities=16%  Similarity=0.142  Sum_probs=108.9

Q ss_pred             CCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccc
Q psy15995         45 GQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNE  124 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~  124 (683)
                      +.+.++..+|....=++..--.|.|++..+..+-+.+-.|. .+..+.||.+..+| ....+|++.|+++-.... ....
T Consensus        44 gGpIAV~r~p~~~~~~~~a~~~I~If~~sG~lL~~~~w~~~-~lI~mgWs~~eeLI-~v~k~g~v~Vy~~~ge~i-e~~s  120 (829)
T KOG2280|consen   44 GGPIAVTRSPSKLVPLYSARPYIRIFNISGQLLGRILWKHG-ELIGMGWSDDEELI-CVQKDGTVHVYGLLGEFI-ESNS  120 (829)
T ss_pred             CCceEEEecccccccccccceeEEEEeccccchHHHHhcCC-CeeeecccCCceEE-EEeccceEEEeecchhhh-cccc
Confidence            44445555553333333333468999986555444433444 78899999988555 557999999999865421 1110


Q ss_pred             cccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEE-eccccceeeecc-ccccCCCeeEEEEcCCC-CeEE
Q psy15995        125 FHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIW-DTVNKEHILKNE-FHPIGGPIKDIAWSPDN-QRMV  201 (683)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw-d~~~~~~~~~~~-~~~~~~~i~~~~~s~~~-~~l~  201 (683)
                         .+       .-.....|....+..+|-.+.+.  +|.+.+- +.+... +.+.. .+...-+-.+....+++ +...
T Consensus       121 ---vg-------~e~~~~~I~ec~~f~~GVavlt~--~g~v~~i~~~~~~~-~~~~~diP~~~~~~~~Wt~~~~~~~~~~  187 (829)
T KOG2280|consen  121 ---VG-------FESQMSDIVECRFFHNGVAVLTV--SGQVILINGVEEPK-LRKMPDIPYNELPKSCWTVFQPHRQSTI  187 (829)
T ss_pred             ---cc-------cccccCceeEEEEecCceEEEec--CCcEEEEcCCCcch-hhhCCCCCCccCCCcceeEecCCCccee
Confidence               00       00111445666666666444433  3444333 332211 11111 11111111222222222 1111


Q ss_pred             EEecCCceEEEEEEccCC-CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc--ccccCeEEE
Q psy15995        202 VVGEGRERFGHVFMSETG-TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ--EHSRFVQAV  278 (683)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~  278 (683)
                      ...-+......+...+.. .....+......+..+..+|+.++ |+.-...|.|.+-+.+..+....+.  .|. ....+
T Consensus       188 ll~v~~~v~~~~~q~~~~~~q~~~~~~~~~~~~ki~VS~n~~~-laLyt~~G~i~~vs~D~~~~lce~~~~~~~-~p~qm  265 (829)
T KOG2280|consen  188 LLDVDVAVGLHICQVEESRVQLHALSWPNSSVVKISVSPNRRF-LALYTETGKIWVVSIDLSQILCEFNCTDHD-PPKQM  265 (829)
T ss_pred             EEeechhhhhcccceecccccccccCCCCceEEEEEEcCCcce-EEEEecCCcEEEEecchhhhhhccCCCCCC-chHhc
Confidence            111110000111111111 112223333467888999999996 8888999999998877666555544  222 22356


Q ss_pred             EECCCC
Q psy15995        279 RYSPSG  284 (683)
Q Consensus       279 ~~~~~~  284 (683)
                      +|.-+.
T Consensus       266 ~Wcgnd  271 (829)
T KOG2280|consen  266 AWCGND  271 (829)
T ss_pred             eeecCC
Confidence            665444

>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]

Probab=95.83  E-value=2.1  Score=42.13  Aligned_cols=278  Identities=13%  Similarity=0.071  Sum_probs=127.7

Q ss_pred             cCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCc-ccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccc
Q psy15995         43 QRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEH-SCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHIL  121 (683)
Q Consensus        43 ~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h-~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~  121 (683)
                      ....+.++.+...|.+.+.. ..-+..||..+++..+.-... ..+|..+..+-.| .|..|+.+| |.+.+....+...
T Consensus       163 ~d~~V~aLv~D~~g~lWvgT-~dGL~~fd~~~gkalql~s~~~dk~I~al~~d~qg-~LWVGTdqG-v~~~e~~G~~~sn  239 (671)
T COG3292         163 KDTPVVALVFDANGRLWVGT-PDGLSYFDAGRGKALQLASPPLDKAINALIADVQG-RLWVGTDQG-VYLQEAEGWRASN  239 (671)
T ss_pred             cCccceeeeeeccCcEEEec-CCcceEEccccceEEEcCCCcchhhHHHHHHHhcC-cEEEEeccc-eEEEchhhccccc
Confidence            34566777788888655554 445677888887766543333 3677777777777 455666665 7777765532111


Q ss_pred             ccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccc-eeeeccccccCCCeeEEEEcCCCCeE
Q psy15995        122 KNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKE-HILKNEFHPIGGPIKDIAWSPDNQRM  200 (683)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l  200 (683)
                      ....-+             ...|..+.-..+| .+-.|++.|..+. ....+. .............|.++-...+|+.=
T Consensus       240 ~~~~lp-------------~~~I~ll~qD~qG-~lWiGTenGl~r~-~l~rq~Lq~~~~~~~l~~S~vnsL~~D~dGsLW  304 (671)
T COG3292         240 WGPMLP-------------SGNILLLVQDAQG-ELWIGTENGLWRT-RLPRQGLQIPLSKMHLGVSTVNSLWLDTDGSLW  304 (671)
T ss_pred             cCCCCc-------------chheeeeecccCC-CEEEeecccceeE-ecCCCCccccccccCCccccccceeeccCCCEe
Confidence            111111             0122222222222 3333444443222 222211 11111122222455666666666543


Q ss_pred             EEEecCCceEEEEEEccCC--CceeeeecCCc-CeEEEEeecC--CCeEEEEeeCCCeEEEEcCCCCceeeecc-ccccC
Q psy15995        201 VVVGEGRERFGHVFMSETG--TSVGEISGQSK-PINSCDFKPS--RPFRIITGSEDNTIAVFEGPPFKFKMTKQ-EHSRF  274 (683)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~v~~~~~~~~--~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~  274 (683)
                      .. ..++     ++...+.  .....+....+ .+-.++..|.  +. .+--...-|.+.+-+..++....... .....
T Consensus       305 v~-t~~g-----iv~~~~a~w~~ma~in~~dG~v~~~~~~a~~ll~~-~v~~~ns~g~L~van~stG~~v~sv~q~Rg~n  377 (671)
T COG3292         305 VG-TYGG-----IVRYLTADWKRMAVINDSDGGVSQYEAVAPALLSW-GVRQLNSIGELMVANGSTGELVRSVHQLRGMN  377 (671)
T ss_pred             ee-ccCc-----eEEEecchhhheeeeecCCCchhhhhccCchhccc-ceeeccccceEEEecCCCCcEEEEeeeccccc
Confidence            32 2221     1111111  11111111111 1111111220  00 11112222333444444454444322 22345


Q ss_pred             eEEEEECCCCCEEEEEcCCCcEEEEeCCC-CeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCc
Q psy15995        275 VQAVRYSPSGSHFASAGFDGKVFLYDGAS-ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       275 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      |+.+++..++. +-.++...-+..|+.++ +........ ...++|..+--.|+++ |..++.+|.++. +.+.++
T Consensus       378 it~~~~d~~g~-lWlgs~q~GLsrl~n~n~~avlde~ag-l~ss~V~aived~dns-LWIGTs~Glvk~-~pe~~~  449 (671)
T COG3292         378 ITTTLEDSRGR-LWLGSMQNGLSRLDNKNEWAVLDEDAG-LPSSEVSAIVEDPDNS-LWIGTSGGLVKR-DPESGR  449 (671)
T ss_pred             cchhhhccCCc-EEEEecccchhhhccCCcccccccccC-CcccceeeeeecCCCC-EEEeccCCeEec-Cccccc
Confidence            66677776554 44555554466677666 333333322 2567888888889888 888888875443 444433

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.76  E-value=0.37  Score=49.02  Aligned_cols=111  Identities=14%  Similarity=0.223  Sum_probs=73.2

Q ss_pred             eeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEec--CCCCeEEEeecCCcEEEEeCC-----C
Q psy15995        567 VTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWS--PDSALVASGSLDTTIIIWSLA-----S  639 (683)
Q Consensus       567 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s--~d~~~l~~~~~d~~v~iw~~~-----~  639 (683)
                      ++-+.-|.-++.-++-+...++.|||...+.+.....+. ..+.|.++.|.  ||++.+.+.+-...|.+|.-.     .
T Consensus        32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~-~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~  110 (631)
T PF12234_consen   32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFS-EDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTN  110 (631)
T ss_pred             cceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeec-CCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhc
Confidence            344444554555555555668999999999877666654 67889999985  689988888889999998532     1


Q ss_pred             ----CceeeEeec-CCCCCCeeEEEEccCCeEEEeeCCCcEEEEe
Q psy15995        640 ----PAKHIIIKN-AHPQSQITRLQWLDNDLLVSVGQDCNTKIWE  679 (683)
Q Consensus       640 ----~~~~~~~~~-~~~~~~v~~l~~~~~~~l~s~~~d~~v~vw~  679 (683)
                          ...+..+.. .+-..+|.+..|.+++.|+.++ ++.+.|++
T Consensus       111 ~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s-GNqlfv~d  154 (631)
T PF12234_consen  111 KGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS-GNQLFVFD  154 (631)
T ss_pred             CCcccceeEEEEeecCCCCCccceeEecCCeEEEEe-CCEEEEEC
Confidence                112222221 2223689999999666666655 34566653

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PHA03098 kelch-like protein; Provisional

Probab=95.76  E-value=1.2  Score=46.21  Aligned_cols=110  Identities=12%  Similarity=0.110  Sum_probs=58.8

Q ss_pred             cCCCEEEEEcCC------CcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCC--------CeEEEEECCCC
Q psy15995        531 HEHGLVAVGGAD------SKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAH--------RKVVLYRVPDF  596 (683)
Q Consensus       531 ~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------~~i~i~~~~~~  596 (683)
                      -++++.+.|+.+      ..+..||..+.+............-.+ +...+++..+.|+.+        ..+.+||..+.
T Consensus       388 ~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~  466 (534)
T PHA03098        388 VNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGC-AIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTN  466 (534)
T ss_pred             ECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCce-EEEECCEEEEECCccCCCCCcccceEEEecCCCC
Confidence            356677777632      358899988765543222211111111 222356666666542        23888998876


Q ss_pred             ccccccceeeecccEEEEEecCCCCeEEEeecC-----CcEEEEeCCCCcee
Q psy15995        597 ELAHNKEWGFHSAKVNCVAWSPDSALVASGSLD-----TTIIIWSLASPAKH  643 (683)
Q Consensus       597 ~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d-----~~v~iw~~~~~~~~  643 (683)
                      +................+.+  ++++++.|+.+     ..+.+||..+.+-.
T Consensus       467 ~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~  516 (534)
T PHA03098        467 KWTELSSLNFPRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDKTNTWT  516 (534)
T ss_pred             ceeeCCCCCcccccceEEEE--CCEEEEEcCCcCCcccceeEEEeCCCCEEE
Confidence            65433222101111112222  67788888765     46888888776543

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=95.70  E-value=0.86  Score=47.01  Aligned_cols=147  Identities=14%  Similarity=0.199  Sum_probs=92.4

Q ss_pred             CCEEEEEcCCCcEEEEEcCCCccCcc------eee---------------cCCcCeeEEEECC--CCCEEEEEeCCCeEE
Q psy15995        533 HGLVAVGGADSKVHIYELNNKSLSPK------AEL---------------DHLGPVTDCSFSP--SNEYLVASDAHRKVV  589 (683)
Q Consensus       533 ~~~l~~~~~dg~i~i~d~~~~~~~~~------~~~---------------~~~~~v~~~~~s~--~~~~l~~~~~d~~i~  589 (683)
                      +.+++++. .+.|.||+...-...+.      ...               .....|+.|....  +...|+++.+||.|.
T Consensus        49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~  127 (717)
T PF08728_consen   49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVL  127 (717)
T ss_pred             CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEE
Confidence            66676655 57899998865433211      000               0111244444333  456889999999999


Q ss_pred             EEECCC-------C----c-------cccccceeeecccEEEEEec--CCCCeEEEeecCCcEEEEeCCCCcee-eEeec
Q psy15995        590 LYRVPD-------F----E-------LAHNKEWGFHSAKVNCVAWS--PDSALVASGSLDTTIIIWSLASPAKH-IIIKN  648 (683)
Q Consensus       590 i~~~~~-------~----~-------~~~~~~~~~h~~~v~~~~~s--~d~~~l~~~~~d~~v~iw~~~~~~~~-~~~~~  648 (683)
                      +|.+++       .    +       ......+. -...+.++++.  ...++||+++....|.||-+...... ...+.
T Consensus       128 ~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s  206 (717)
T PF08728_consen  128 AYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPS  206 (717)
T ss_pred             EEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccc
Confidence            997632       0    0       00111222 34568889998  78889999988888888877653222 11112


Q ss_pred             CCCCCCeeEEEEccC----C---eEEEeeCCCcEEEEeec
Q psy15995        649 AHPQSQITRLQWLDN----D---LLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       649 ~~~~~~v~~l~~~~~----~---~l~s~~~d~~v~vw~~~  681 (683)
                      ..|...|-+|.|.++    .   .|++++-.|.+.+|++.
T Consensus       207 ~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~  246 (717)
T PF08728_consen  207 HQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK  246 (717)
T ss_pred             cccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence            225678999999822    2   78889999999999883

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>KOG2377|consensus

Probab=95.70  E-value=0.33  Score=45.87  Aligned_cols=134  Identities=10%  Similarity=0.129  Sum_probs=86.3

Q ss_pred             EEEEccCCCEEEEEcCCCcEEEEEcCCC--ccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCcc--ccc
Q psy15995        526 SISLDHEHGLVAVGGADSKVHIYELNNK--SLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFEL--AHN  601 (683)
Q Consensus       526 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~--~~~  601 (683)
                      .+-|....+.+++. ..|.+.=|..+..  .....+.....++|.++.||+|.+.||+-..+..|.+++....+.  ...
T Consensus        27 gvFfDDaNkqlfav-rSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~  105 (657)
T KOG2377|consen   27 GVFFDDANKQLFAV-RSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYT  105 (657)
T ss_pred             ceeeccCcceEEEE-ecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHH
Confidence            33344334444333 3344555555433  333344455778999999999999999999999999999843322  222


Q ss_pred             cceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEccC
Q psy15995        602 KEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDN  663 (683)
Q Consensus       602 ~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~  663 (683)
                      .........|...+|+.. .-+|.....| +.+|.+...+...++... |+..|.--.|.++
T Consensus       106 ~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrslRlVks-~~~nvnWy~yc~e  164 (657)
T KOG2377|consen  106 QECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRSLRLVKS-HNLNVNWYMYCPE  164 (657)
T ss_pred             HHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhhhhhhhh-cccCccEEEEccc
Confidence            222223456999999865 5677776555 888887766555554322 5788888888844

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=95.68  E-value=1.1  Score=38.18  Aligned_cols=128  Identities=13%  Similarity=0.169  Sum_probs=73.2

Q ss_pred             CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe--CCeEEEEEcCC------eEEE---EeCCCCcccCCcee
Q psy15995        415 GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDD------TIKQ---VDLSSNAYSGPEVK  483 (683)
Q Consensus       415 ~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~------~i~~---~~~~~~~~~~~~~~  483 (683)
                      ..|+.+...+.|.+|++.+...........-+.|..+.++  |+++++--.+.      .+|+   |+...........+
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~vR  108 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRVR  108 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEEE
Confidence            3444445667899999985544444333455788888888  99999986543      3444   33331111111111


Q ss_pred             cCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCcc
Q psy15995        484 LGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSL  555 (683)
Q Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  555 (683)
                      ..+.+..-.            ........-.+..+|...++.+++..|-..-|++|+. +++.+|.+.....
T Consensus       109 iaG~~v~~~------------~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~-~~l~lf~l~~~~~  167 (215)
T PF14761_consen  109 IAGHRVTPS------------FNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCG-NKLVLFTLKYQTI  167 (215)
T ss_pred             EcccccccC------------CCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcC-CEEEEEEEEEEEE
Confidence            111000000            0000011234556778889999999998888888776 5688888765443

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.64  E-value=0.16  Score=51.44  Aligned_cols=113  Identities=18%  Similarity=0.335  Sum_probs=78.4

Q ss_pred             CCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEEC--CCCCEEEEEeCCCeEEEEECC------
Q psy15995        523 EPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFS--PSNEYLVASDAHRKVVLYRVP------  594 (683)
Q Consensus       523 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~d~~i~i~~~~------  594 (683)
                      .++-+.-+.-++..++......+.|||...+.+.........+.|.++.|.  ||++.+++.+-...|.+|.-.      
T Consensus        31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~  110 (631)
T PF12234_consen   31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTN  110 (631)
T ss_pred             CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhc
Confidence            345555556555555555566799999999987666666678899999885  589999999999999998642      


Q ss_pred             ---CCccccccceeeec-ccEEEEEecCCCCeEEEeecCCcEEEEeC
Q psy15995        595 ---DFELAHNKEWGFHS-AKVNCVAWSPDSALVASGSLDTTIIIWSL  637 (683)
Q Consensus       595 ---~~~~~~~~~~~~h~-~~v~~~~~s~d~~~l~~~~~d~~v~iw~~  637 (683)
                         +...+.......|. .+|.+..|.+||.+++.+  ++.+.|++-
T Consensus       111 ~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk  155 (631)
T PF12234_consen  111 KGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDK  155 (631)
T ss_pred             CCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECC
Confidence               12222222222233 679999999999766544  456888874

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=95.63  E-value=0.076  Score=49.77  Aligned_cols=242  Identities=17%  Similarity=0.158  Sum_probs=126.4

Q ss_pred             CCCCCceeecCCCCCCceeeecccceeecC--CCcccCCCeEEEeeCCCCCeEE---------EecCCeEEEEeCC----
Q psy15995          9 TQRGQPIVLGGDPKGKNFLYTNGNKYIFAT--LPRTQRGQPIVLGGDPKGKNFL---------YTNGNSVIIRNIE----   73 (683)
Q Consensus         9 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~l~---------~~~~~~i~v~~~~----   73 (683)
                      +|-|+....-|-..|+..++.+.....++.  ....+....  ++..+.|+.+-         -..+....++|..    
T Consensus       123 ~~~gqp~~alglsngqv~v~qp~~s~t~p~pg~~Fp~g~~p--~aLd~qgr~leh~~~~lalA~~~~~qf~~~~~t~~~~  200 (733)
T COG4590         123 TPPGQPWFALGLSNGQVAVVQPQLSHTMPTPGREFPPGLEP--LALDEQGRLLEHPLQQLALALTAEAQFATYDNTQQIQ  200 (733)
T ss_pred             CCCCCceEEEeccCCeEEEEeccccccCCCCCccCCCCCCc--cccCcccCcccchHHHhhhccchhhHHHHhhhhhhhh
Confidence            466777777777778877776555554431  111111111  22333333211         1122223333322    


Q ss_pred             --------CCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccc-cccccCCCCcccceeeeeecce
Q psy15995         74 --------NPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILK-NEFHPIGGPIKDIGTLLSLTSI  144 (683)
Q Consensus        74 --------~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i  144 (683)
                              .++.++.+..--..|..+-..|||+.|..-+. .++.|+++.+.....+ +-....+...         ..|
T Consensus       201 ~L~g~~t~q~e~i~~L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~---------~~V  270 (733)
T COG4590         201 ILRGDRTTQQEIIRLLSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSR---------HQV  270 (733)
T ss_pred             hhhcccCchhhhhhhcCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchH---------HHH
Confidence                    23344445566778889999999998877655 5789998876532221 1111111000         112


Q ss_pred             e-eeEeeccceEEEeecCCccEEEE-eccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCce
Q psy15995        145 R-NILVLSIGFYIASGDISGKVRIW-DTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSV  222 (683)
Q Consensus       145 ~-~~~~s~~~~~l~~~~~d~~i~iw-d~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~  222 (683)
                      . .+..-..|..|.+++.||.|.-| |+..+..       +|-.-+....+.|....++.....                
T Consensus       271 te~l~lL~Gg~SLLv~~~dG~vsQWFdvr~~~~-------p~l~h~R~f~l~pa~~~~l~pe~~----------------  327 (733)
T COG4590         271 TEQLYLLSGGFSLLVVHEDGLVSQWFDVRRDGQ-------PHLNHIRNFKLAPAEVQFLLPETN----------------  327 (733)
T ss_pred             HHHHHHHhCceeEEEEcCCCceeeeeeeecCCC-------CcceeeeccccCcccceeeccccc----------------
Confidence            1 22234456778888889988877 4433211       111223333343332222221111                


Q ss_pred             eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCC
Q psy15995        223 GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGA  302 (683)
Q Consensus       223 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  302 (683)
                                        .+ .+++-+.+|++.++.....+.+... .--..+.-+++||++.++++-. .|.++++.++
T Consensus       328 ------------------rk-gF~~l~~~G~L~~f~st~~~~lL~~-~~~~~~~~~~~Sp~~~~Ll~e~-~gki~~~~l~  386 (733)
T COG4590         328 ------------------RK-GFYSLYRNGTLQSFYSTSEKLLLFE-RAYQAPQLVAMSPNQAYLLSED-QGKIRLAQLE  386 (733)
T ss_pred             ------------------cc-eEEEEcCCCceeeeecccCcceehh-hhhcCcceeeeCcccchheeec-CCceEEEEec
Confidence                              11 2556666677777664333332222 2223567789999999988765 5789999887


Q ss_pred             CCee
Q psy15995        303 SADL  306 (683)
Q Consensus       303 ~~~~  306 (683)
                      +...
T Consensus       387 Nr~P  390 (733)
T COG4590         387 NRNP  390 (733)
T ss_pred             CCCC
Confidence            6544

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=95.48  E-value=0.66  Score=47.80  Aligned_cols=115  Identities=12%  Similarity=0.148  Sum_probs=78.0

Q ss_pred             CCcEEEEc--cCCCEEEEEcCCCcEEEEEcCC-------C-----------ccCcceeecCCcCeeEEEEC--CCCCEEE
Q psy15995        523 EPSSISLD--HEHGLVAVGGADSKVHIYELNN-------K-----------SLSPKAELDHLGPVTDCSFS--PSNEYLV  580 (683)
Q Consensus       523 ~~~~~~~~--~~~~~l~~~~~dg~i~i~d~~~-------~-----------~~~~~~~~~~~~~v~~~~~s--~~~~~l~  580 (683)
                      .|+.+.+.  -+...|+++.+||.|.+|..+.       .           ...+.+........+.++++  ...+++|
T Consensus       102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIA  181 (717)
T PF08728_consen  102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIA  181 (717)
T ss_pred             eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEE
Confidence            34444443  3556899999999999997521       0           11122333345678899998  7888999


Q ss_pred             EEeCCCeEEEEECCC--CccccccceeeecccEEEEEecCCC---C---eEEEeecCCcEEEEeCC
Q psy15995        581 ASDAHRKVVLYRVPD--FELAHNKEWGFHSAKVNCVAWSPDS---A---LVASGSLDTTIIIWSLA  638 (683)
Q Consensus       581 ~~~~d~~i~i~~~~~--~~~~~~~~~~~h~~~v~~~~~s~d~---~---~l~~~~~d~~v~iw~~~  638 (683)
                      +++....|.||-...  .+........ |...|.+++|-++.   .   .|++++-.|.+.+|++.
T Consensus       182 VSsNs~~VTVFaf~l~~~r~~~~~s~~-~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~  246 (717)
T PF08728_consen  182 VSSNSQEVTVFAFALVDERFYHVPSHQ-HSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK  246 (717)
T ss_pred             EecCCceEEEEEEeccccccccccccc-cccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence            998888888886654  2222222222 66779999997743   2   78889999999998883

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PHA02790 Kelch-like protein; Provisional

Probab=95.29  E-value=1.3  Score=44.84  Aligned_cols=106  Identities=9%  Similarity=0.092  Sum_probs=57.5

Q ss_pred             ccCCCEEEEEcCCC---cEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceee
Q psy15995        530 DHEHGLVAVGGADS---KVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGF  606 (683)
Q Consensus       530 ~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~  606 (683)
                      .-++++.+.|+.++   .+..||..+.+............ ...+..-+++..+.|+   .+.+||..+.+.........
T Consensus       360 ~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~-~~~~~~~~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~  435 (480)
T PHA02790        360 SINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHY-KSCALVFGRRLFLVGR---NAEFYCESSNTWTLIDDPIY  435 (480)
T ss_pred             EECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccc-cceEEEECCEEEEECC---ceEEecCCCCcEeEcCCCCC
Confidence            44677777777543   47788887765543322221111 1112233566666663   57789988776643332221


Q ss_pred             ecccEEEEEecCCCCeEEEeecC-----CcEEEEeCCCCc
Q psy15995        607 HSAKVNCVAWSPDSALVASGSLD-----TTIIIWSLASPA  641 (683)
Q Consensus       607 h~~~v~~~~~s~d~~~l~~~~~d-----~~v~iw~~~~~~  641 (683)
                      .........  -++++.+.|+.+     ..+..||..+.+
T Consensus       436 ~r~~~~~~v--~~~~IYviGG~~~~~~~~~ve~Yd~~~~~  473 (480)
T PHA02790        436 PRDNPELII--VDNKLLLIGGFYRGSYIDTIEVYNNRTYS  473 (480)
T ss_pred             CccccEEEE--ECCEEEEECCcCCCcccceEEEEECCCCe
Confidence            111222222  377888888765     356777776654

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=95.25  E-value=1.1  Score=38.26  Aligned_cols=104  Identities=20%  Similarity=0.277  Sum_probs=63.9

Q ss_pred             eEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceE----EE-EEEccCC----Ccee-
Q psy15995        154 FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERF----GH-VFMSETG----TSVG-  223 (683)
Q Consensus       154 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~----~~-~~~~~~~----~~~~-  223 (683)
                      ..|..+.....|.+|++...+......+... +.|..+.++..|+++++.-......    .+ ..+|+..    .++. 
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v  107 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV  107 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence            3444445567899999995554445555544 8899999999999999987554332    23 3445422    2222 


Q ss_pred             eeecC---------------------CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC
Q psy15995        224 EISGQ---------------------SKPINSCDFKPSRPFRIITGSEDNTIAVFEGP  260 (683)
Q Consensus       224 ~~~~~---------------------~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~  260 (683)
                      .+-||                     ..++.+++-.|-... |+.|+. +.+.+|.+.
T Consensus       108 RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~-LlVg~~-~~l~lf~l~  163 (215)
T PF14761_consen  108 RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGN-LLVGCG-NKLVLFTLK  163 (215)
T ss_pred             EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCC-EEEEcC-CEEEEEEEE
Confidence            12222                     335667777776554 666554 578888754

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=95.08  E-value=3.2  Score=39.48  Aligned_cols=162  Identities=17%  Similarity=0.121  Sum_probs=93.0

Q ss_pred             cCCCeEEEeeC-CCCCeEEEecCCe------EEEEeCCC--C--ccc-----ccccCccc--------ceEEEEECCCCc
Q psy15995         43 QRGQPIVLGGD-PKGKNFLYTNGNS------VIIRNIEN--P--AIS-----DIYTEHSC--------AVNVAKYSPSGF   98 (683)
Q Consensus        43 ~~~~~~~~~~s-~~~~~l~~~~~~~------i~v~~~~~--~--~~~-----~~~~~h~~--------~v~~~~~s~d~~   98 (683)
                      .-+....+.+. .++++++.+..+.      ++...+..  +  ..+     ..+..-.+        ...+|++.++|.
T Consensus        18 ~~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~   97 (326)
T PF13449_consen   18 PFGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGS   97 (326)
T ss_pred             ccCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCC
Confidence            34667778888 5666677766666      55555543  1  000     01111111        345788888998


Q ss_pred             EEEEecCC------CCEEEEeCCCcccccccccccCCCCcc-cceeeeeecceeeeEeeccceEEEeecC-----Cc---
Q psy15995         99 YIASGDIS------GKVRIWDTVNKEHILKNEFHPIGGPIK-DIGTLLSLTSIRNILVLSIGFYIASGDI-----SG---  163 (683)
Q Consensus        99 ~las~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----d~---  163 (683)
                      ++++--.+      ..|..++.. |+.+..+.....-.+.. .............++++|||+.|.++.+     |+   
T Consensus        98 ~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~  176 (326)
T PF13449_consen   98 FWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRA  176 (326)
T ss_pred             EEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccc
Confidence            98887777      788888876 66655553322110000 0023344467899999999996655432     22   


Q ss_pred             ------cEEEE--eccc-ccee--eeccccc-----cCCCeeEEEEcCCCCeEEEEec
Q psy15995        164 ------KVRIW--DTVN-KEHI--LKNEFHP-----IGGPIKDIAWSPDNQRMVVVGE  205 (683)
Q Consensus       164 ------~i~iw--d~~~-~~~~--~~~~~~~-----~~~~i~~~~~s~~~~~l~~~~~  205 (683)
                            .++++  |..+ ++..  ..+.+..     ....+..+.+-+++++++.--.
T Consensus       177 ~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~  234 (326)
T PF13449_consen  177 NPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERD  234 (326)
T ss_pred             ccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEcc
Confidence                  14554  4443 2122  2222322     3477899999999997666433

>PHA03098 kelch-like protein; Provisional

Probab=95.05  E-value=2.9  Score=43.37  Aligned_cols=194  Identities=11%  Similarity=0.060  Sum_probs=87.1

Q ss_pred             CCCcEEEEecCCC------CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC-----c
Q psy15995         95 PSGFYIASGDISG------KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS-----G  163 (683)
Q Consensus        95 ~d~~~las~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----~  163 (683)
                      .++..++.|+.++      .+..||..+.+....-...   .+          ..-.. +..-+++..+.|+.+     .
T Consensus       293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~---~~----------R~~~~-~~~~~~~lyv~GG~~~~~~~~  358 (534)
T PHA03098        293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELI---YP----------RKNPG-VTVFNNRIYVIGGIYNSISLN  358 (534)
T ss_pred             ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCC---cc----------cccce-EEEECCEEEEEeCCCCCEecc
Confidence            4566667776542      4777887776542111000   00          00111 223356677777765     3


Q ss_pred             cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCc----eEEEEEEccCCCce--eeeecCCcCeEEEEe
Q psy15995        164 KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE----RFGHVFMSETGTSV--GEISGQSKPINSCDF  237 (683)
Q Consensus       164 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~  237 (683)
                      .+..||..+++-.....++..... .+.+ .-+++..+.++....    ..+..++..+++-.  ..+...... .+ +.
T Consensus       359 ~v~~yd~~~~~W~~~~~lp~~r~~-~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~-~~-~~  434 (534)
T PHA03098        359 TVESWKPGESKWREEPPLIFPRYN-PCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYG-GC-AI  434 (534)
T ss_pred             eEEEEcCCCCceeeCCCcCcCCcc-ceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccC-ce-EE
Confidence            477888877653222222111111 1122 224444444442111    22445554433211  111111111 11 22


Q ss_pred             ecCCCeEEEEeeCC--------CeEEEEcCCCCceeeecc--ccccCeEEEEECCCCCEEEEEcCC-----CcEEEEeCC
Q psy15995        238 KPSRPFRIITGSED--------NTIAVFEGPPFKFKMTKQ--EHSRFVQAVRYSPSGSHFASAGFD-----GKVFLYDGA  302 (683)
Q Consensus       238 ~~~~~~~l~~~~~d--------~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~  302 (683)
                      ..++. +++.|+.+        ..+.+||..+.+....-.  ........+.+  +++.++.|+.+     ..+.+||..
T Consensus       435 ~~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~  511 (534)
T PHA03098        435 YHDGK-IYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDK  511 (534)
T ss_pred             EECCE-EEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEE--CCEEEEEcCCcCCcccceeEEEeCC
Confidence            23444 46666543        237888877765443221  11111112222  66666677654     468888888


Q ss_pred             CCeeEEe
Q psy15995        303 SADLVSE  309 (683)
Q Consensus       303 ~~~~~~~  309 (683)
                      +.+....
T Consensus       512 ~~~W~~~  518 (534)
T PHA03098        512 TNTWTLF  518 (534)
T ss_pred             CCEEEec
Confidence            7765444

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=94.76  E-value=4.4  Score=39.44  Aligned_cols=148  Identities=11%  Similarity=0.082  Sum_probs=77.0

Q ss_pred             CCeEEEeeCCCCCeEEEec-------------CCeEEEEeCCC--Ccc--cccccCcccceEEEEECCCCcEEEEecCCC
Q psy15995         45 GQPIVLGGDPKGKNFLYTN-------------GNSVIIRNIEN--PAI--SDIYTEHSCAVNVAKYSPSGFYIASGDISG  107 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~-------------~~~i~v~~~~~--~~~--~~~~~~h~~~v~~~~~s~d~~~las~~~dg  107 (683)
                      ..+..+++.++|+++++..             ++.|.+++-.+  ++.  ...+...-...+.+++.++| ++++ +...
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~-~~~~   91 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVA-TPPD   91 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEe-CCCe
Confidence            4678889999999888752             23787776543  322  23344444566889999999 4444 4443


Q ss_pred             CEEEEeCCCccccc---ccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC-------------------ccE
Q psy15995        108 KVRIWDTVNKEHIL---KNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS-------------------GKV  165 (683)
Q Consensus       108 ~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-------------------~~i  165 (683)
                      ..++.|.......-   +.-.......     ..........+++.|||.+.++-+..                   |.|
T Consensus        92 i~~~~d~~gdg~ad~~~~~l~~~~~~~-----~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i  166 (367)
T TIGR02604        92 ILFLRDKDGDDKADGEREVLLSGFGGQ-----INNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGL  166 (367)
T ss_pred             EEEEeCCCCCCCCCCccEEEEEccCCC-----CCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceE
Confidence            23333543221000   0000000000     00012446788999998765543321                   334


Q ss_pred             EEEeccccceeeeccccccCCCeeEEEEcCCCCeEEE
Q psy15995        166 RIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVV  202 (683)
Q Consensus       166 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  202 (683)
                      .-++..+++..  ....+ -.....++|+|+|+.+++
T Consensus       167 ~r~~pdg~~~e--~~a~G-~rnp~Gl~~d~~G~l~~t  200 (367)
T TIGR02604       167 FRYNPDGGKLR--VVAHG-FQNPYGHSVDSWGDVFFC  200 (367)
T ss_pred             EEEecCCCeEE--EEecC-cCCCccceECCCCCEEEE
Confidence            44455443321  11111 234567889888877654

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.72  E-value=0.12  Score=30.57  Aligned_cols=32  Identities=38%  Similarity=0.518  Sum_probs=27.0

Q ss_pred             cceEEEEECCC-C--cEEEEecCCCCEEEEeCCCc
Q psy15995         86 CAVNVAKYSPS-G--FYIASGDISGKVRIWDTVNK  117 (683)
Q Consensus        86 ~~v~~~~~s~d-~--~~las~~~dg~i~iwd~~~~  117 (683)
                      ++|.++.|||+ +  .+||.+-..|.|.|+|+.++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence            47899999984 4  59999988999999999853

It contains a characteristic DLL sequence motif.

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=94.68  E-value=2.9  Score=37.02  Aligned_cols=240  Identities=11%  Similarity=0.045  Sum_probs=149.7

Q ss_pred             eEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEE-ec
Q psy15995        232 INSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVS-EL  310 (683)
Q Consensus       232 v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~  310 (683)
                      -..++-.|+|. .-+++...+.|--.|-.+++....-.+.......+..-|||..-++-+.. -|.-.|-++.+... .+
T Consensus        64 p~dvapapdG~-VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~f~l  141 (353)
T COG4257          64 PFDVAPAPDGA-VWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTRFPL  141 (353)
T ss_pred             ccccccCCCCc-eEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceEEeec
Confidence            45667777876 47777777788888888888877776667777788889998866654433 56666765654432 22


Q ss_pred             cCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCC
Q psy15995        311 GNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN  390 (683)
Q Consensus       311 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~  390 (683)
                      .............|.+.|++-+++.. |.---.|... ..+..+..........++..+++..-++.-.++.|-..|...
T Consensus       142 p~~~a~~nlet~vfD~~G~lWFt~q~-G~yGrLdPa~-~~i~vfpaPqG~gpyGi~atpdGsvwyaslagnaiaridp~~  219 (353)
T COG4257         142 PLEHADANLETAVFDPWGNLWFTGQI-GAYGRLDPAR-NVISVFPAPQGGGPYGICATPDGSVWYASLAGNAIARIDPFA  219 (353)
T ss_pred             ccccCCCcccceeeCCCccEEEeecc-ccceecCccc-CceeeeccCCCCCCcceEECCCCcEEEEeccccceEEccccc
Confidence            22234567788899999998887752 2222222221 223344444455666778888888888888888888888765


Q ss_pred             CCcceeee-eeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe--CCeEEEEEcCCeE
Q psy15995        391 PSTPIRVI-KGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTI  467 (683)
Q Consensus       391 ~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i  467 (683)
                      ........ ......-..+--+|.+..-++....+.+.-+|............+....-.++..+  +..-++-...+.|
T Consensus       220 ~~aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW~eypLPgs~arpys~rVD~~grVW~sea~agai  299 (353)
T COG4257         220 GHAEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSWIEYPLPGSKARPYSMRVDRHGRVWLSEADAGAI  299 (353)
T ss_pred             CCcceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccceeeeCCCCCCCcceeeeccCCcEEeeccccCce
Confidence            43222211 12133345556677888888887888899998877665544444555555566655  3333333344555


Q ss_pred             EEEeCCCC
Q psy15995        468 KQVDLSSN  475 (683)
Q Consensus       468 ~~~~~~~~  475 (683)
                      ..+|..+.
T Consensus       300 ~rfdpeta  307 (353)
T COG4257         300 GRFDPETA  307 (353)
T ss_pred             eecCcccc
Confidence            55555443

>PHA02790 Kelch-like protein; Provisional

Probab=94.67  E-value=4  Score=41.46  Aligned_cols=190  Identities=11%  Similarity=-0.004  Sum_probs=84.4

Q ss_pred             ccceEEEeecCCc-----cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeee
Q psy15995        151 SIGFYIASGDISG-----KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEI  225 (683)
Q Consensus       151 ~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  225 (683)
                      .++..+++|+.++     .+..||..+++......+...... .+++ .-++...++++.+....+..|+..+++-. .+
T Consensus       270 ~~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~-~~~v-~~~~~iYviGG~~~~~sve~ydp~~n~W~-~~  346 (480)
T PHA02790        270 VGEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLY-ASGV-PANNKLYVVGGLPNPTSVERWFHGDAAWV-NM  346 (480)
T ss_pred             ECCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhc-ceEE-EECCEEEEECCcCCCCceEEEECCCCeEE-EC
Confidence            3455666776543     467788877653332222211111 1222 23455445544332222344444332211 11


Q ss_pred             ecCCcCe-EEEEeecCCCeEEEEeeCCC---eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeC
Q psy15995        226 SGQSKPI-NSCDFKPSRPFRIITGSEDN---TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDG  301 (683)
Q Consensus       226 ~~~~~~v-~~~~~~~~~~~~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  301 (683)
                      ..-..+. ......-++. +.+.|+.++   .+..||..+.+....-......-...+..-+++..+.|   |.+.+||.
T Consensus       347 ~~l~~~r~~~~~~~~~g~-IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~G---G~~e~ydp  422 (480)
T PHA02790        347 PSLLKPRCNPAVASINNV-IYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVG---RNAEFYCE  422 (480)
T ss_pred             CCCCCCCcccEEEEECCE-EEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEEC---CceEEecC
Confidence            1111111 1112223444 466666543   46678876655443211111111111223355555555   45788998


Q ss_pred             CCCeeEEeccCCccccCeEEEEEccCCCEEEEEECC-----CcEEEEECCCCc
Q psy15995        302 ASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD-----KTCKLWDIETKS  349 (683)
Q Consensus       302 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~  349 (683)
                      ++++....-..+...... +++. -+++..+.|+.+     ..+..||..+++
T Consensus       423 ~~~~W~~~~~m~~~r~~~-~~~v-~~~~IYviGG~~~~~~~~~ve~Yd~~~~~  473 (480)
T PHA02790        423 SSNTWTLIDDPIYPRDNP-ELII-VDNKLLLIGGFYRGSYIDTIEVYNNRTYS  473 (480)
T ss_pred             CCCcEeEcCCCCCCcccc-EEEE-ECCEEEEECCcCCCcccceEEEEECCCCe
Confidence            877665433222112222 2222 256777777654     346666666554

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=94.63  E-value=4.8  Score=39.29  Aligned_cols=280  Identities=11%  Similarity=0.133  Sum_probs=145.2

Q ss_pred             ccCCCCCCceeecCCCCCCceeeecccceeec---CCCcccCCCeEEEee----C-CCCCeEEEecCCeEEEEeCCC--C
Q psy15995          6 LPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFA---TLPRTQRGQPIVLGG----D-PKGKNFLYTNGNSVIIRNIEN--P   75 (683)
Q Consensus         6 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----s-~~~~~l~~~~~~~i~v~~~~~--~   75 (683)
                      +.-+++++-.++.|+..|...++.+.....-+   -+....+..|..+..    + ++...||.=.-..+.||.+..  +
T Consensus        30 ~~~~~~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g  109 (418)
T PF14727_consen   30 LDNSPSGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDG  109 (418)
T ss_pred             ccCCCCCccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCC
Confidence            33457777777778888988887753322111   111222334444432    2 244466666778888888732  1


Q ss_pred             c-------ccccccCcccce--EEEEECC----C-CcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeee
Q psy15995         76 A-------ISDIYTEHSCAV--NVAKYSP----S-GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSL  141 (683)
Q Consensus        76 ~-------~~~~~~~h~~~v--~~~~~s~----d-~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (683)
                      .       .+..+..|.-.-  ..+.+-|    . ..+|..=+.||.+.+++-+.-.....+...               
T Consensus       110 ~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~---------------  174 (418)
T PF14727_consen  110 TVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDF---------------  174 (418)
T ss_pred             CcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCC---------------
Confidence            1       112222332221  2222222    2 357777889999999997665432222221               


Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccceee---------------ecccc-----ccCCCee---EEEEcCCCC
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHIL---------------KNEFH-----PIGGPIK---DIAWSPDNQ  198 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~---------------~~~~~-----~~~~~i~---~~~~s~~~~  198 (683)
                      .-...+.+.+.-..+++++.+..+.-|....-....               ...+.     .....+.   .+.++....
T Consensus       175 llPgPl~Y~~~tDsfvt~sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~  254 (418)
T PF14727_consen  175 LLPGPLCYCPRTDSFVTASSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLGEQALDIQVVRFSSSES  254 (418)
T ss_pred             CCCcCeEEeecCCEEEEecCceeEEEecHHHhhhccccccccccccccccccccccceeEEECCceeEEEEEEEcCCCCc
Confidence            223456788888888888888888888753211000               00000     0112333   334444455


Q ss_pred             eEEEEecCCceEEEEEEcc-CCCceeeeecCCcCeEEEEee------cCCCeEEEEeeCCCeEEEEcCCCCceeeecccc
Q psy15995        199 RMVVVGEGRERFGHVFMSE-TGTSVGEISGQSKPINSCDFK------PSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH  271 (683)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~------~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~  271 (683)
                      .+++.+..     .++..+ +|......+-.-.+...+.|.      |+....++.++.++++.||.-.+......+..-
T Consensus       255 ~IvvLger-----~Lf~l~~~G~l~~~krLd~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d~~L~WsA~l~~~  329 (418)
T PF14727_consen  255 DIVVLGER-----SLFCLKDNGSLRFQKRLDYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYEDTTLVWSAQLPHV  329 (418)
T ss_pred             eEEEEecc-----eEEEEcCCCeEEEEEecCCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEeCCeEEEecCCCCC
Confidence            56666654     233333 454433333322233222232      233335889999999999975544444433211


Q ss_pred             ccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCe
Q psy15995        272 SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASAD  305 (683)
Q Consensus       272 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  305 (683)
                      .-.|.-..|..-...+++-+.+|.+.+-=+.+..
T Consensus       330 PVal~v~~~~~~~G~IV~Ls~~G~L~v~YLGTdP  363 (418)
T PF14727_consen  330 PVALSVANFNGLKGLIVSLSDEGQLSVSYLGTDP  363 (418)
T ss_pred             CEEEEecccCCCCceEEEEcCCCcEEEEEeCCCC
Confidence            1122222233334478888888988887665544

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=94.58  E-value=5.4  Score=42.30  Aligned_cols=77  Identities=21%  Similarity=0.303  Sum_probs=53.0

Q ss_pred             ccCeEEEEECCCCCEEEEEcCCCcEEEEeCCC----------Cee--EE-ec------cCCccccCeEEEEEccC---CC
Q psy15995        272 SRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS----------ADL--VS-EL------GNPAHKGGVYAVAWKPD---GT  329 (683)
Q Consensus       272 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~----------~~~--~~-~~------~~~~~~~~i~~~~~~~~---~~  329 (683)
                      .-.|..+.++|+|.+++..+..|. .|-.+..          ++.  .. .+      ........|..+.|+|.   +.
T Consensus        84 ~f~v~~i~~n~~g~~lal~G~~~v-~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~  162 (717)
T PF10168_consen   84 LFEVHQISLNPTGSLLALVGPRGV-VVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS  162 (717)
T ss_pred             ceeEEEEEECCCCCEEEEEcCCcE-EEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence            346889999999999999887664 3333321          111  11 11      00124567899999995   57


Q ss_pred             EEEEEECCCcEEEEECCCCc
Q psy15995        330 QLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       330 ~l~~~~~dg~i~iwd~~~~~  349 (683)
                      .|++-+.|+.+++||+....
T Consensus       163 ~l~vLtsdn~lR~y~~~~~~  182 (717)
T PF10168_consen  163 HLVVLTSDNTLRLYDISDPQ  182 (717)
T ss_pred             eEEEEecCCEEEEEecCCCC
Confidence            89999999999999997644

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=94.55  E-value=1.9  Score=41.98  Aligned_cols=141  Identities=14%  Similarity=0.158  Sum_probs=76.3

Q ss_pred             CCCcEEEEccCCCEEEEEc-----------CCC-cEEEEEcCCC--ccCc-ceeecCCcCeeEEEECCCCCEEEEEeCCC
Q psy15995        522 YEPSSISLDHEHGLVAVGG-----------ADS-KVHIYELNNK--SLSP-KAELDHLGPVTDCSFSPSNEYLVASDAHR  586 (683)
Q Consensus       522 ~~~~~~~~~~~~~~l~~~~-----------~dg-~i~i~d~~~~--~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~d~  586 (683)
                      ..+..+++.++|+++++-.           ..+ .|.+++-.++  +... ............+++.+++ +++ ++.. 
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~~-   90 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATPP-   90 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCCC-
Confidence            4678899999999877753           223 6777765432  2211 1222334456889999998 444 4444 


Q ss_pred             eEEEE-ECCCC-----ccc-cccceee----ecccEEEEEecCCCCeEEEeecC-------------------CcEEEEe
Q psy15995        587 KVVLY-RVPDF-----ELA-HNKEWGF----HSAKVNCVAWSPDSALVASGSLD-------------------TTIIIWS  636 (683)
Q Consensus       587 ~i~i~-~~~~~-----~~~-~~~~~~~----h~~~v~~~~~s~d~~~l~~~~~d-------------------~~v~iw~  636 (683)
                      .|..+ +....     +.. ....+..    +......++|.|||++.++-+..                   |.|.-++
T Consensus        91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~  170 (367)
T TIGR02604        91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYN  170 (367)
T ss_pred             eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEe
Confidence            34444 44321     111 0011111    23447789999999887765521                   3455555


Q ss_pred             CCCCceeeEeecCCCCCCeeEEEEc-cCCeEEE
Q psy15995        637 LASPAKHIIIKNAHPQSQITRLQWL-DNDLLVS  668 (683)
Q Consensus       637 ~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s  668 (683)
                      ...++.. .+.. . -.....++|. +++++++
T Consensus       171 pdg~~~e-~~a~-G-~rnp~Gl~~d~~G~l~~t  200 (367)
T TIGR02604       171 PDGGKLR-VVAH-G-FQNPYGHSVDSWGDVFFC  200 (367)
T ss_pred             cCCCeEE-EEec-C-cCCCccceECCCCCEEEE
Confidence            5444332 2222 1 2446789998 5555544

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PRK13614 lipoprotein LpqB; Provisional

Probab=94.48  E-value=6.6  Score=40.22  Aligned_cols=180  Identities=9%  Similarity=0.078  Sum_probs=89.8

Q ss_pred             cCCeEEEEeCCCCcccccccCccc-ceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccc-cccccCCCCcccceeeee
Q psy15995         63 NGNSVIIRNIENPAISDIYTEHSC-AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILK-NEFHPIGGPIKDIGTLLS  140 (683)
Q Consensus        63 ~~~~i~v~~~~~~~~~~~~~~h~~-~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~  140 (683)
                      .+|.+...+-..-+.+.-..+... .+.+++.|++++.+|....++. .+|-...+..... +..               
T Consensus       319 ~~G~l~~~~~~~~~pv~g~~g~~~~~~~s~avS~~g~~~A~~~~~~~-~l~~~~~g~~~~~~~~g---------------  382 (573)
T PRK13614        319 SDGELVRYENGQISPLPDIQSVAGLGPASPAESPVSQTVAFLNGSRT-TLYTVSPGQPARALTSG---------------  382 (573)
T ss_pred             cCCeEEEecCCCcccCCCccCcCcccccceeecCCCceEEEecCCCc-EEEEecCCCcceeeecC---------------
Confidence            455554444333333333334444 7889999999999998877762 3343222221111 111               


Q ss_pred             ecceeeeEeeccceEEEeecCC--ccEEEEecc-ccce----eeeccccccCC-CeeEEEEcCCCCeEEEEe--cCCc--
Q psy15995        141 LTSIRNILVLSIGFYIASGDIS--GKVRIWDTV-NKEH----ILKNEFHPIGG-PIKDIAWSPDNQRMVVVG--EGRE--  208 (683)
Q Consensus       141 ~~~i~~~~~s~~~~~l~~~~~d--~~i~iwd~~-~~~~----~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~--~~~~--  208 (683)
                       .....-.|.++| ++-+...+  +.|....-. +++.    .......-..+ .|..+..|+||..+++..  +++.  
T Consensus       383 -~~Lt~PS~d~~g-~vWtv~~g~~~~vv~~~~~g~~~~~~~~~~~v~~~~l~g~~I~~lrvSrDG~R~Avi~~~~g~~~V  460 (573)
T PRK13614        383 -STLTRPSFSPQD-WVWTAGPGGNGRIVAYRPTGVAEGAQAPTVTLTADWLAGRTVKELRVSREGVRALVISEQNGKSRV  460 (573)
T ss_pred             -CCccCCcccCCC-CEEEeeCCCCceEEEEecCCCcccccccceeecccccCCCeeEEEEECCCccEEEEEEEeCCccEE
Confidence             234444566655 33333222  233333321 1110    00111222334 499999999999999877  3321  


Q ss_pred             eEEEEEEccCCCceeeee----cCCcCeEEEEeecCCCeEEEEeeCC--CeEEEEcCC
Q psy15995        209 RFGHVFMSETGTSVGEIS----GQSKPINSCDFKPSRPFRIITGSED--NTIAVFEGP  260 (683)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~d--~~i~iw~~~  260 (683)
                      .+..|..-..|.+...-.    .....+.++.|..++...+.+...+  ..+++..+.
T Consensus       461 ~va~V~R~~~G~P~~L~~~~~~~~~~~~~sl~W~~~~sl~V~~~~~~~~~~~~~v~v~  518 (573)
T PRK13614        461 QVAGIVRNEDGTPRELTAPITLAADSDADTGAWVGDSTVVVTKASATSNVVPELLSVD  518 (573)
T ss_pred             EEEEEEeCCCCCeEEccCceecccCCCcceeEEcCCCEEEEEeccCCCcceEEEEEeC
Confidence            122233333454222111    2346889999999998433332223  344555553

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=94.45  E-value=4.8  Score=38.45  Aligned_cols=64  Identities=5%  Similarity=-0.004  Sum_probs=31.0

Q ss_pred             CCCEEEEEECCC-----cEEEEECCCCcee---eEEEecCcceeceEEEEecCCEEEEEec-----CCcEEEEecCC
Q psy15995        327 DGTQLLTASGDK-----TCKLWDIETKSVV---SEFIMGNQVEDQQVSCLWQGDYLLTVSL-----SGFISYLDVNN  390 (683)
Q Consensus       327 ~~~~l~~~~~dg-----~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~g~i~~~~~~~  390 (683)
                      +++.++.|+.++     .+..+|+.+.+..   ..................++...+.|+.     ...+..||+..
T Consensus        72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~~~~iYv~GG~~~~~~~~~v~~yd~~~  148 (323)
T TIGR03548        72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYKDGTLYVGGGNRNGKPSNKSYLFNLET  148 (323)
T ss_pred             CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEECCEEEEEeCcCCCccCceEEEEcCCC
Confidence            456666666542     4666777665531   1111111111112223345666666654     23567777764

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.39  E-value=0.22  Score=29.56  Aligned_cols=32  Identities=25%  Similarity=0.382  Sum_probs=26.8

Q ss_pred             ccEEEEEecCCC---CeEEEeecCCcEEEEeCCCC
Q psy15995        609 AKVNCVAWSPDS---ALVASGSLDTTIIIWSLASP  640 (683)
Q Consensus       609 ~~v~~~~~s~d~---~~l~~~~~d~~v~iw~~~~~  640 (683)
                      +.|.++.|||+.   .+|+.+-.-|.|.|+|+++.
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence            468999999854   48888888899999999853

It contains a characteristic DLL sequence motif.

>KOG2247|consensus

Probab=94.38  E-value=0.0063  Score=57.26  Aligned_cols=144  Identities=19%  Similarity=0.254  Sum_probs=104.0

Q ss_pred             CcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEE-EEeCCCeEEEEECCCCcccccc
Q psy15995        524 PSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLV-ASDAHRKVVLYRVPDFELAHNK  602 (683)
Q Consensus       524 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~  602 (683)
                      +....+-+.+.-+++++.+..+..||-......   .....+....++|..++..++ .+-..+.+.+||+.+..... .
T Consensus        37 pi~~~w~~e~~nlavaca~tiv~~YD~agq~~l---e~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqq-L  112 (615)
T KOG2247|consen   37 PIIHRWRPEGHNLAVACANTIVIYYDKAGQVIL---ELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQ-L  112 (615)
T ss_pred             cceeeEecCCCceehhhhhhHHHhhhhhcceec---ccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHH-H
Confidence            345567777777999999999999986654433   222344556778877776665 45677899999998654332 2


Q ss_pred             ceee-ecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEccCCeEEEeeCCCcE
Q psy15995        603 EWGF-HSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNT  675 (683)
Q Consensus       603 ~~~~-h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~v  675 (683)
                      +.++ |+...  +.|++....++.+-..|.+.|++..+.+.....  +.|..++++++|..+++.+.++.|..+
T Consensus       113 E~gg~~s~sl--l~wsKg~~el~ig~~~gn~viynhgtsR~iiv~--Gkh~RRgtq~av~lEd~vil~dcd~~L  182 (615)
T KOG2247|consen  113 ESGGTSSKSL--LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVM--GKHQRRGTQIAVTLEDYVILCDCDNTL  182 (615)
T ss_pred             hccCcchHHH--HhhccCCccccccccccceEEEeccchhhhhhh--cccccceeEEEecccceeeecCcHHHH
Confidence            2221 33333  789999999999999999999998887766555  447899999999987788888877654

>KOG1896|consensus

Probab=94.33  E-value=9.8  Score=41.58  Aligned_cols=137  Identities=13%  Similarity=0.186  Sum_probs=74.7

Q ss_pred             CcEEEEEcCCCccCcceeecCCcCeeEEEECC---------CCCEEEEEe---------CCCeEEEEECCC-----Cccc
Q psy15995        543 SKVHIYELNNKSLSPKAELDHLGPVTDCSFSP---------SNEYLVASD---------AHRKVVLYRVPD-----FELA  599 (683)
Q Consensus       543 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~---------~~~~l~~~~---------~d~~i~i~~~~~-----~~~~  599 (683)
                      ..|.+.+..+.+.+....++....++++....         -..||++|.         ..|.++|||+-.     ++..
T Consensus      1004 f~i~LisP~sw~vi~~iefq~~E~v~~~k~v~L~~~~t~~~~k~ylavGT~~~~gEDv~~RGr~hi~diIeVVPepgkP~ 1083 (1366)
T KOG1896|consen 1004 FSIQLISPESWEVIDKIEFQENEHVLHMKYVILDDEETTKGKKPYLAVGTAFIQGEDVPARGRIHIFDIIEVVPEPGKPF 1083 (1366)
T ss_pred             ceeEEecCCccccccccccCccceeeEEEEEEEEecccccCCcceEEEEEeecccccccCcccEEEEEEEEecCCCCCCc
Confidence            34566666666666555555555566655421         135788774         348899999732     2111


Q ss_pred             cccc-----eeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCcee-eEe---------------------------
Q psy15995        600 HNKE-----WGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKH-III---------------------------  646 (683)
Q Consensus       600 ~~~~-----~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~-~~~---------------------------  646 (683)
                      ....     ...-.++|..+|=- +|. |+++. ...|.+|+++....+ ..-                           
T Consensus      1084 t~~KlKel~~eE~KGtVsavceV-~G~-l~~~~-GqKI~v~~l~r~~~ligVaFiD~~~yv~s~~~vknlIl~gDV~ksi 1160 (1366)
T KOG1896|consen 1084 TKNKLKELYIEEQKGTVSAVCEV-RGH-LLSSQ-GQKIIVRKLDRDSELIGVAFIDLPLYVHSMKVVKNLILAGDVMKSI 1160 (1366)
T ss_pred             ccceeeeeehhhcccceEEEEEe-ccE-EEEcc-CcEEEEEEeccCCcceeeEEeccceeEEehhhhhhheehhhhhhce
Confidence            1110     01134666655432 454 44433 346888888333221 100                           


Q ss_pred             ---------------ecCCCCCCeeEEEEc-cCC--eEEEeeCCCcEEEEeecc
Q psy15995        647 ---------------KNAHPQSQITRLQWL-DND--LLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       647 ---------------~~~~~~~~v~~l~~~-~~~--~l~s~~~d~~v~vw~~~~  682 (683)
                                     ......-.+.++.|. ++.  .++++..|+.|+++-..|
T Consensus      1161 sfl~fqeep~rlsL~srd~~~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y~P 1214 (1366)
T KOG1896|consen 1161 SFLGFQEEPYRLSLLSRDFEPLNVYSTEFLVDGSNLSFLVSDADRNIHVYMYAP 1214 (1366)
T ss_pred             EEEEEccCceEEEEeecCCchhhceeeeeEEcCCeeEEEEEcCCCcEEEEEeCC
Confidence                           011112356777887 554  678889999999987754

>KOG2377|consensus

Probab=94.32  E-value=5.2  Score=38.33  Aligned_cols=154  Identities=11%  Similarity=0.114  Sum_probs=89.1

Q ss_pred             EEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceee---
Q psy15995        190 DIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM---  266 (683)
Q Consensus       190 ~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~---  266 (683)
                      .+-|...++.+++...++..-+.+--.+...++..-....++|.++.|++|++. ++.--.+.+|.+++....+...   
T Consensus        27 gvFfDDaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnki-lAVQR~~~~v~f~nf~~d~~~l~~~  105 (657)
T KOG2377|consen   27 GVFFDDANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKI-LAVQRTSKTVDFCNFIPDNSQLEYT  105 (657)
T ss_pred             ceeeccCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcce-EEEEecCceEEEEecCCCchhhHHH
Confidence            344444444444444333211222222222333333445669999999999994 9999999999999864333222   


Q ss_pred             -eccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC-eeEEeccCCccccCeEEEEEccCCCEEEEEEC--CCcEEE
Q psy15995        267 -TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA-DLVSELGNPAHKGGVYAVAWKPDGTQLLTASG--DKTCKL  342 (683)
Q Consensus       267 -~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~i  342 (683)
                       ..+..+..|....|+.+. .+|..+..| +.+|..... ..++..+.  ++-.|.-..|.++.+.++-++.  .+.+.=
T Consensus       106 ~~ck~k~~~IlGF~W~~s~-e~A~i~~~G-~e~y~v~pekrslRlVks--~~~nvnWy~yc~et~v~LL~t~~~~n~lnp  181 (657)
T KOG2377|consen  106 QECKTKNANILGFCWTSST-EIAFITDQG-IEFYQVLPEKRSLRLVKS--HNLNVNWYMYCPETAVILLSTTVLENVLNP  181 (657)
T ss_pred             HHhccCcceeEEEEEecCe-eEEEEecCC-eEEEEEchhhhhhhhhhh--cccCccEEEEccccceEeeecccccccccc
Confidence             223345568889998774 466555444 666654433 23333333  7788999999998876554443  334444


Q ss_pred             EECCCC
Q psy15995        343 WDIETK  348 (683)
Q Consensus       343 wd~~~~  348 (683)
                      +.++++
T Consensus       182 f~~~~~  187 (657)
T KOG2377|consen  182 FHFRAG  187 (657)
T ss_pred             EEEeec
Confidence            444443

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=94.29  E-value=2.9  Score=35.32  Aligned_cols=155  Identities=8%  Similarity=-0.038  Sum_probs=83.3

Q ss_pred             CCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCe
Q psy15995        196 DNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFV  275 (683)
Q Consensus       196 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v  275 (683)
                      +|.++.+.+.-+...+++++..+|+.+..-+-....+..=-...-+.+.....-.+|.-..+|.++.+.+..+.-. +.=
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~-GeG  133 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYE-GEG  133 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccC-Ccc
Confidence            4566666666666668888888888766544332222211112223333444456788888998887776655422 222


Q ss_pred             EEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCe---EEEEEccCCCEEEEEECCCcEEEEECCCCceee
Q psy15995        276 QAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGV---YAVAWKPDGTQLLTASGDKTCKLWDIETKSVVS  352 (683)
Q Consensus       276 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  352 (683)
                      +.+  ..|++.|+.++....++.-|.++-....++.......+|   ..+.|- +|...+-.-.+..|...+.++|+.+.
T Consensus       134 WgL--t~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sGrV~~  210 (262)
T COG3823         134 WGL--TSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSGRVVA  210 (262)
T ss_pred             eee--ecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCCcEEE
Confidence            333  345666777766667777776655443333221122222   333343 45544444444456666666666655


Q ss_pred             EE
Q psy15995        353 EF  354 (683)
Q Consensus       353 ~~  354 (683)
                      .+
T Consensus       211 wi  212 (262)
T COG3823         211 WI  212 (262)
T ss_pred             EE
Confidence            44

>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast)

Probab=94.28  E-value=7.5  Score=40.05  Aligned_cols=165  Identities=15%  Similarity=0.117  Sum_probs=84.1

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEecccccee--eeccccccCCCeeEEEEcC------CCCeEEEEec--CCceEE
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHI--LKNEFHPIGGPIKDIAWSP------DNQRMVVVGE--GRERFG  211 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~i~~~~~s~------~~~~l~~~~~--~~~~~~  211 (683)
                      ..+..+.|.+++..+++...+|.|.+||...+...  ..........-+.+ .|-+      ...++++.+.  +.....
T Consensus       130 ~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys-~fv~~~~~~~~~~~ll~v~~~~~~k~~y  208 (670)
T PF10395_consen  130 DKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYS-KFVNDFELENGKDLLLTVSQLSNSKLSY  208 (670)
T ss_pred             cceEEEEEecCCCEEEEEEcCCcEEEEeccccccccccccccccccceehh-hhhcccccccCCceEEEEEEcCCCcEEE
Confidence            56777777777778888888888888887322111  11111100011111 2222      2345555554  333444


Q ss_pred             EEEEc-cCCCceeeee---cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecccc-----c-cCeEEEEEC
Q psy15995        212 HVFMS-ETGTSVGEIS---GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH-----S-RFVQAVRYS  281 (683)
Q Consensus       212 ~~~~~-~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-----~-~~v~~~~~~  281 (683)
                      +++.. .....+.++.   .+........|+-.... |.-- .+++|.+|++...+...++.-.     . ..+.++.- 
T Consensus       209 kL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~~G~-LY~l-~~~~i~~ysip~f~~~~tI~l~~ii~~~~~~~vSl~~-  285 (670)
T PF10395_consen  209 KLISLSNESSSIFELSSTILENFGLEDSKFCYQFGK-LYQL-SKKTISSYSIPNFQIQKTISLPSIIDKESDDLVSLKP-  285 (670)
T ss_pred             EEEEeccCCcceEEeehheeccCCcccceEEEeCCE-EEEE-eCCEEEEEEcCCceEEEEEEechhhccccccceEeec-
Confidence            55555 2334444443   22333334444433321 3322 7789999999888766655321     1 23334432 


Q ss_pred             CCCCEEEEEcCCCcEEEEeCCCCeeEEecc
Q psy15995        282 PSGSHFASAGFDGKVFLYDGASADLVSELG  311 (683)
Q Consensus       282 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  311 (683)
                      |..+.++.+. +..|++.|+.-...+..+.
T Consensus       286 ~s~nRvLLs~-~nkIyLld~~~~siLse~~  314 (670)
T PF10395_consen  286 PSPNRVLLSV-NNKIYLLDLKFESILSEFE  314 (670)
T ss_pred             CCCCeEEEEc-CCEEEEEeehhhhhhhhhh
Confidence            2333444443 5789999987666555544

It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=94.21  E-value=1.1  Score=43.21  Aligned_cols=146  Identities=17%  Similarity=0.222  Sum_probs=87.6

Q ss_pred             cCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCe------EEEEeeCCCeEEEEcCCC-Cceee
Q psy15995        194 SPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPF------RIITGSEDNTIAVFEGPP-FKFKM  266 (683)
Q Consensus       194 s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~------~l~~~~~d~~i~iw~~~~-~~~~~  266 (683)
                      ..|...++.-++..+ ..+-.+.+.|+.+.+...|..-  -+.|.|..++      .-+.|-.+..|.-.|.+- +..+.
T Consensus       476 ~~dssli~~dg~~~~-kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~  552 (776)
T COG5167         476 DNDSSLIYLDGGERD-KLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIK  552 (776)
T ss_pred             cCCcceEEecCCCcc-cceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCcee
Confidence            334445554444443 3455667789999888888776  5667765432      134444555555555332 21111


Q ss_pred             eccccccCeEEEEECC----CCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEE
Q psy15995        267 TKQEHSRFVQAVRYSP----SGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKL  342 (683)
Q Consensus       267 ~~~~~~~~v~~~~~~~----~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  342 (683)
                      .. ......+.-.|+.    ...++|+++..|.|++||--.......+  |+-...|..+..+.+|+++++.+.. .+.+
T Consensus       553 v~-esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtal--P~lG~aIk~idvta~Gk~ilaTCk~-yllL  628 (776)
T COG5167         553 VV-ESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTAL--PGLGDAIKHIDVTANGKHILATCKN-YLLL  628 (776)
T ss_pred             ee-eehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcC--cccccceeeeEeecCCcEEEEeecc-eEEE
Confidence            11 1112222222322    2348999999999999995443333333  4577889999999999998887764 6777


Q ss_pred             EECC
Q psy15995        343 WDIE  346 (683)
Q Consensus       343 wd~~  346 (683)
                      -|+.
T Consensus       629 ~d~~  632 (776)
T COG5167         629 TDVP  632 (776)
T ss_pred             Eecc
Confidence            7765

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=94.19  E-value=1.3  Score=46.62  Aligned_cols=31  Identities=35%  Similarity=0.473  Sum_probs=24.6

Q ss_pred             cCCCCCcEEEEccCCCEEEEEcCCCcEEEEEc
Q psy15995        519 PIDYEPSSISLDHEHGLVAVGGADSKVHIYEL  550 (683)
Q Consensus       519 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~  550 (683)
                      +..+.|..+.++|+|.+|+..+..| |.|..+
T Consensus        82 ~~~f~v~~i~~n~~g~~lal~G~~~-v~V~~L  112 (717)
T PF10168_consen   82 PPLFEVHQISLNPTGSLLALVGPRG-VVVLEL  112 (717)
T ss_pred             CCceeEEEEEECCCCCEEEEEcCCc-EEEEEe
Confidence            4557889999999999999998865 555554

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF14779 BBS1: Ciliary BBSome complex subunit 1

Probab=94.12  E-value=4  Score=36.35  Aligned_cols=159  Identities=10%  Similarity=0.129  Sum_probs=96.2

Q ss_pred             eecCCcCeEEEEeecCCCeEEEEee-----CCCeEEEEcCCCCceeeeccccccCeEEEEECC---CCCEEEEEcCCCcE
Q psy15995        225 ISGQSKPINSCDFKPSRPFRIITGS-----EDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSP---SGSHFASAGFDGKV  296 (683)
Q Consensus       225 ~~~~~~~v~~~~~~~~~~~~l~~~~-----~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i  296 (683)
                      +..-...+.-.....||.+.|+.+.     .+..+++|..........+.+-...|.+.-...   .-..+|+++ ...|
T Consensus        13 l~t~ssC~~l~Dl~gDGd~kLvvaD~g~~~~~~kLKVykGt~l~~E~~L~d~P~ai~sFy~d~~ep~~P~iAVA~-G~~v   91 (257)
T PF14779_consen   13 LYTFSSCMALADLQGDGDYKLVVADLGTGDQNMKLKVYKGTSLISEITLPDLPSAIVSFYMDEHEPRTPAIAVAA-GPSV   91 (257)
T ss_pred             ccccCceeEeeecCCCCeEEEEEEecCCcCCCceEEEEcCCChhhcccccCCCeEEEEEeccCCCCCCCeEEEEe-CCEE
Confidence            3334445555566778888888887     467999998666555555555444444433222   223566666 4578


Q ss_pred             EEEeCCCCeeEEeccC----------------------------------------------------------------
Q psy15995        297 FLYDGASADLVSELGN----------------------------------------------------------------  312 (683)
Q Consensus       297 ~iw~~~~~~~~~~~~~----------------------------------------------------------------  312 (683)
                      .+|.-  .++..++..                                                                
T Consensus        92 yiYkN--lkP~yKftlP~~~~~~~E~eiW~~~~~~~i~~~~l~~~L~~lr~~~~~~LS~rSl~~L~l~~ee~~~fi~~~k  169 (257)
T PF14779_consen   92 YIYKN--LKPFYKFTLPPLEINPLEQEIWQQLREGKIDPETLKEMLESLRDIAGVKLSPRSLRFLQLDPEEREAFIERYK  169 (257)
T ss_pred             EEEec--ccceeeecCCCCCCCHHHHHHHHhcccCCCCHHHHHHHHHHHhhccCCccCHHHHHHHCCCHHHHHHHHHHHh
Confidence            88731  111111000                                                                


Q ss_pred             ---CccccCeEEEEEccC-------CCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEec--CCEEEEEecC
Q psy15995        313 ---PAHKGGVYAVAWKPD-------GTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ--GDYLLTVSLS  380 (683)
Q Consensus       313 ---~~~~~~i~~~~~~~~-------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~  380 (683)
                         ......|+|++--..       -..|+.|+++|.|.+.|.+....+.+.............-..+  +-.+++++.|
T Consensus       170 ~~pl~~~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lpsvPv~i~~~G~~devdyRI~Va~Rd  249 (257)
T PF14779_consen  170 DSPLKRQTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLPSVPVFISVSGQYDEVDYRIVVACRD  249 (257)
T ss_pred             cCCcccCceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecCCCceEEEEEeeeeccceEEEEEeCC
Confidence               013456788765331       2479999999999999999888887776664433322222233  4467888888


Q ss_pred             CcEEEE
Q psy15995        381 GFISYL  386 (683)
Q Consensus       381 g~i~~~  386 (683)
                      |.|++.
T Consensus       250 g~iy~i  255 (257)
T PF14779_consen  250 GKIYTI  255 (257)
T ss_pred             CEEEEE
Confidence            888764

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=93.98  E-value=5.9  Score=37.79  Aligned_cols=57  Identities=12%  Similarity=0.128  Sum_probs=29.3

Q ss_pred             EccCCCEEEEEcCCC----cEEEEEcCCCccCcceeecC-CcCe---eEE-EECCCCCEEEEEeCC
Q psy15995        529 LDHEHGLVAVGGADS----KVHIYELNNKSLSPKAELDH-LGPV---TDC-SFSPSNEYLVASDAH  585 (683)
Q Consensus       529 ~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~-~~~v---~~~-~~s~~~~~l~~~~~d  585 (683)
                      ...++++.+.|+.++    .+..||..+.+......... ..+.   ... +...++++++.|+.+
T Consensus       168 ~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~  233 (323)
T TIGR03548       168 VKLQNELYVFGGGSNIAYTDGYKYSPKKNQWQKVADPTTDSEPISLLGAASIKINESLLLCIGGFN  233 (323)
T ss_pred             EEECCEEEEEcCCCCccccceEEEecCCCeeEECCCCCCCCCceeccceeEEEECCCEEEEECCcC
Confidence            345667777777653    35688888766432222111 0111   111 122356777777765

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=93.87  E-value=4.9  Score=36.48  Aligned_cols=212  Identities=13%  Similarity=0.155  Sum_probs=116.1

Q ss_pred             ceeeeEeeccceEEEeecCCccEEEEecc------ccceeeeccccc-----cCCCeeEEEEcCCCCeEEEEecCCceEE
Q psy15995        143 SIRNILVLSIGFYIASGDISGKVRIWDTV------NKEHILKNEFHP-----IGGPIKDIAWSPDNQRMVVVGEGRERFG  211 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~~~~~d~~i~iwd~~------~~~~~~~~~~~~-----~~~~i~~~~~s~~~~~l~~~~~~~~~~~  211 (683)
                      .-..|+++|.+.+.++....+...+||..      ..+. +...++.     .....+.+.|+....+.+..........
T Consensus        24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~-L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~  102 (336)
T TIGR03118        24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDP-LVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSR  102 (336)
T ss_pred             ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccc-eEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCccccee
Confidence            45678999999999998889999999987      1211 2222221     2246778888865544332211111111


Q ss_pred             EEEEccCCC----------c-----eeeee-cCCcCe-EEEEeec--CCCeEEEEeeCCCeEEEEcCCCCceeee--ccc
Q psy15995        212 HVFMSETGT----------S-----VGEIS-GQSKPI-NSCDFKP--SRPFRIITGSEDNTIAVFEGPPFKFKMT--KQE  270 (683)
Q Consensus       212 ~~~~~~~~~----------~-----~~~~~-~~~~~v-~~~~~~~--~~~~~l~~~~~d~~i~iw~~~~~~~~~~--~~~  270 (683)
                      .++..+.|.          .     ...+. .....| ..+++..  .+.++.++--.+++|.+||..-.+....  +..
T Consensus       103 Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~D  182 (336)
T TIGR03118       103 FLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFID  182 (336)
T ss_pred             EEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccC
Confidence            222222211          1     11111 112223 3444443  3555556666789999998433221110  000


Q ss_pred             c----------------ccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc------CC
Q psy15995        271 H----------------SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP------DG  328 (683)
Q Consensus       271 ~----------------~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~  328 (683)
                      .                .-.|+-..-.++++.=+.+..-|.|-+||. .+..++++...+.-.....|+..|      .+
T Consensus       183 P~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~-~G~l~~r~as~g~LNaPWG~a~APa~FG~~sg  261 (336)
T TIGR03118       183 PALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTL-NGQLLRRVASSGRLNAPWGLAIAPESFGSLSG  261 (336)
T ss_pred             CCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcC-CCcEEEEeccCCcccCCceeeeChhhhCCCCC
Confidence            0                001122222222222233334578999995 678888776545555667777755      46


Q ss_pred             CEEEEEECCCcEEEEECCCCceeeEEEe
Q psy15995        329 TQLLTASGDKTCKLWDIETKSVVSEFIM  356 (683)
Q Consensus       329 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~  356 (683)
                      .+|+---.||+|..+|..+++.+-.+..
T Consensus       262 ~lLVGNFGDG~InaFD~~sG~~~g~L~~  289 (336)
T TIGR03118       262 ALLVGNFGDGTINAYDPQSGAQLGQLLD  289 (336)
T ss_pred             CeEEeecCCceeEEecCCCCceeeeecC
Confidence            6676666799999999999887766543

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=93.54  E-value=2.1  Score=40.68  Aligned_cols=156  Identities=13%  Similarity=0.076  Sum_probs=91.7

Q ss_pred             CCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecC-C----cCee-EEEECCCCCEEEEEeCCCeEEEE-ECC
Q psy15995        522 YEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDH-L----GPVT-DCSFSPSNEYLVASDAHRKVVLY-RVP  594 (683)
Q Consensus       522 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~----~~v~-~~~~s~~~~~l~~~~~d~~i~i~-~~~  594 (683)
                      ..+..+-..||++.+.+-+. ..+.++++.+.....+...+. .    ..|+ ++..-..|.-|.+++.||-|.-| |..
T Consensus       221 ~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdvr  299 (733)
T COG4590         221 SDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDVR  299 (733)
T ss_pred             cchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeeee
Confidence            45678889999999988776 679999998776554322221 1    1222 22223456778888999988766 433


Q ss_pred             CCccc---cccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEcc-CCeEEEee
Q psy15995        595 DFELA---HNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLD-NDLLVSVG  670 (683)
Q Consensus       595 ~~~~~---~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~  670 (683)
                      .+...   +...+.-...++..+.--.+.+-+++-+..|++.++.-...+.+..-..   -..+.-+++++ ..+|++ -
T Consensus       300 ~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~---~~~~~~~~~Sp~~~~Ll~-e  375 (733)
T COG4590         300 RDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERA---YQAPQLVAMSPNQAYLLS-E  375 (733)
T ss_pred             cCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhh---hcCcceeeeCcccchhee-e
Confidence            22111   1111110112333332222345677788888888887655544433322   24677888894 455555 3


Q ss_pred             CCCcEEEEeecc
Q psy15995        671 QDCNTKIWEIAP  682 (683)
Q Consensus       671 ~d~~v~vw~~~~  682 (683)
                      ..|.++++.++|
T Consensus       376 ~~gki~~~~l~N  387 (733)
T COG4590         376 DQGKIRLAQLEN  387 (733)
T ss_pred             cCCceEEEEecC
Confidence            456688888875

>KOG1916|consensus

Probab=93.51  E-value=0.15  Score=52.43  Aligned_cols=93  Identities=16%  Similarity=0.230  Sum_probs=61.5

Q ss_pred             CcEEEEEcC--CCccCcceeec----CCcCeeEEEE---CCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEE
Q psy15995        543 SKVHIYELN--NKSLSPKAELD----HLGPVTDCSF---SPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNC  613 (683)
Q Consensus       543 g~i~i~d~~--~~~~~~~~~~~----~~~~v~~~~~---s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~  613 (683)
                      |.+.+|+++  .+++.+.....    ....+.-+.|   -++..++..+..++.+++........-  ...+ |...++.
T Consensus       153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~~--l~rs-Hs~~~~d  229 (1283)
T KOG1916|consen  153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALRS--LFRS-HSQRVTD  229 (1283)
T ss_pred             hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHHH--HHHh-cCCCccc
Confidence            567788765  44444433322    2333344444   446778888889999998887665441  1222 7766665


Q ss_pred             EE-----------ecCCCCeEEEeecCCcEEEEeCC
Q psy15995        614 VA-----------WSPDSALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       614 ~~-----------~s~d~~~l~~~~~d~~v~iw~~~  638 (683)
                      ++           .||||..+|.+..||.+++|.+.
T Consensus       230 ~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  230 MAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             HHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence            54           58999999999999999988864

>PRK13615 lipoprotein LpqB; Provisional

Probab=93.38  E-value=10  Score=38.69  Aligned_cols=152  Identities=13%  Similarity=0.054  Sum_probs=79.8

Q ss_pred             EEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEE
Q psy15995         89 NVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIW  168 (683)
Q Consensus        89 ~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw  168 (683)
                      .+++.|+|++.+|....++.+.++........ ....                .....-.|.++| ++-+.......++.
T Consensus       337 ~s~avS~dg~~~A~v~~~~~l~vg~~~~~~~~-~~~~----------------~~Lt~PS~d~~g-~vWtv~~g~~~~l~  398 (557)
T PRK13615        337 DAATLSADGRQAAVRNASGVWSVGDGDRDAVL-LDTR----------------PGLVAPSLDAQG-YVWSTPASDPRGLV  398 (557)
T ss_pred             ccceEcCCCceEEEEcCCceEEEecCCCccee-eccC----------------CccccCcCcCCC-CEEEEeCCCceEEE
Confidence            78899999999998887888888866522111 1111                123334455555 33232222223333


Q ss_pred             eccc-cceeeeccccc-cCCCeeEEEEcCCCCeEEEEec----CCceEEEEEEccCCC--ce----eeeecCCcCeEEEE
Q psy15995        169 DTVN-KEHILKNEFHP-IGGPIKDIAWSPDNQRMVVVGE----GRERFGHVFMSETGT--SV----GEISGQSKPINSCD  236 (683)
Q Consensus       169 d~~~-~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~----~~~~~~~~~~~~~~~--~~----~~~~~~~~~v~~~~  236 (683)
                      .... ++.. ...... ..+.|..+..|+||..+++...    ..-....|.. ..+.  .+    .++......+.++.
T Consensus       399 ~~~~~G~~~-~v~v~~~~~~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R-~~~~P~~L~~~p~~l~~~l~~v~sl~  476 (557)
T PRK13615        399 AWGPDGVGH-PVAVSWTATGRVVSLEVARDGARVLVQLETGAGPQLLVASIVR-DGGVPTSLTTTPLELLASPGTPLDAT  476 (557)
T ss_pred             EecCCCceE-EeeccccCCCeeEEEEeCCCccEEEEEEecCCCCEEEEEEEEe-CCCcceEeeeccEEcccCcCcceeeE
Confidence            3221 2221 111111 2368999999999999998764    2211222222 3331  22    11222234889999


Q ss_pred             eecCCCeEEEEe--eCCCeEEEEcCC
Q psy15995        237 FKPSRPFRIITG--SEDNTIAVFEGP  260 (683)
Q Consensus       237 ~~~~~~~~l~~~--~~d~~i~iw~~~  260 (683)
                      |..++...++..  +.+..+++..+.
T Consensus       477 W~~~~~laVl~~~~~~~~~v~~v~v~  502 (557)
T PRK13615        477 WVDELDVATLTLAPDGERQVELHQVG  502 (557)
T ss_pred             EcCCCEEEEEeccCCCCceEEEEECC
Confidence            999998533332  223445555443

>PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others

Probab=93.30  E-value=16  Score=41.74  Aligned_cols=388  Identities=11%  Similarity=0.109  Sum_probs=0.0

Q ss_pred             eeeccCCCCCCceeecCCCCCCceeeecccceeecCCCcccCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCccccccc
Q psy15995          3 FATLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYT   82 (683)
Q Consensus         3 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~   82 (683)
                      +.++.-+|++.++.+-   +++.+.+..... .|.+.|......+..++-.-||+..|  .++.. +-|+..+.....+-
T Consensus       365 LTgv~~~~~ge~lRlH---d~~LY~~d~~~~-~Wk~~~~~~d~~~S~Ls~qgdG~lYA--k~~~~-l~nLSs~~~~~~~v  437 (1774)
T PF11725_consen  365 LTGVHTDPDGEQLRLH---DDRLYQFDPNTA-RWKPPPDKSDTPFSSLSRQGDGKLYA--KDDDT-LVNLSSGQMSEAEV  437 (1774)
T ss_pred             hhccccCCCCCeEEee---cCceeeeccccc-eecCCCCcccchhhhhcccCCCceEe--cCCCc-eeecCCCCcchhhh


Q ss_pred             CcccceEEEEECCCCcE-EEEecCCCCEEEEeCCCc-----c---cccccccccCCCCcccceeeeeecceeeeEeeccc
Q psy15995         83 EHSCAVNVAKYSPSGFY-IASGDISGKVRIWDTVNK-----E---HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIG  153 (683)
Q Consensus        83 ~h~~~v~~~~~s~d~~~-las~~~dg~i~iwd~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  153 (683)
                         ..|.+...+++|+. +.++-....+.+|++...     .   ....+....              .....+.++++ 
T Consensus       438 ---~~l~sfSv~~~g~vA~L~~~d~q~~qL~~m~~~~a~~~p~~~~~L~L~dG~--------------a~A~~VgLs~d-  499 (1774)
T PF11725_consen  438 ---DKLKSFSVAPDGTVAMLTGKDGQTLQLHDMSPVDAPPTPRKTKTLQLADGK--------------AQAQSVGLSND-  499 (1774)
T ss_pred             ---hhcccccccCCCceeeeecCCCcceeeeccCccccccCccceeeeeccCCc--------------hhhhheeecCC-


Q ss_pred             eEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCC---eEEEEecCCceEEEEEEccCCCceeeeecCCc
Q psy15995        154 FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQ---RMVVVGEGRERFGHVFMSETGTSVGEISGQSK  230 (683)
Q Consensus       154 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (683)
                       .|++...+|.++.=++...+           ..-..+...|...   .=...+.+...... ..-+.|..-..++...+
T Consensus       500 -rLFvADseGkLYsa~l~~~~-----------~~~~~l~~~p~~~~~~~~~~~G~~~~VtGF-~~gd~G~lhAlikd~~G  566 (1774)
T PF11725_consen  500 -RLFVADSEGKLYSADLPAAQ-----------DNEPKLKLMPEPAYQLLGSALGGDHKVTGF-ISGDDGQLHALIKDRQG  566 (1774)
T ss_pred             -eEEEEeCCCCEEeccccccc-----------CCCcceEeccccccccccccccccceeecc-ccCCCCeeeEEEeccCC


Q ss_pred             CeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccC--eEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy15995        231 PINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF--VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVS  308 (683)
Q Consensus       231 ~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~  308 (683)
                      .+.++.+..++.. +=.|        |++..--.+..-.+-...  ......-.-++.=..+=.+|.|.-||-.+.....
T Consensus       567 Q~Hs~aLde~~~~-~~pG--------WNLSd~Lvl~N~~GL~~~~~p~~~~~ldl~r~G~v~L~~G~i~~wD~ttq~W~~  637 (1774)
T PF11725_consen  567 QRHSHALDEQGSQ-LQPG--------WNLSDALVLDNTRGLPKPPAPAPHEILDLGRAGLVGLQDGKIQYWDSTTQCWKD  637 (1774)
T ss_pred             ceeeccccccCCc-cCCC--------CcccceeEeeccCCCCCCCCCChHHhhccccccceeeccceEeeecCcchhhhh


Q ss_pred             eccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEec
Q psy15995        309 ELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDV  388 (683)
Q Consensus       309 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~  388 (683)
                      .     ....|..+.=--|++-.+.  .+|.|+-.++........+                       +.+..+.+-..
T Consensus       638 ~-----~~kd~~~L~RG~D~~AYVL--k~G~vk~l~i~~~~~~~~~-----------------------g~~~~~a~~~~  687 (1774)
T PF11725_consen  638 A-----GVKDIDQLKRGLDGNAYVL--KDGKVKRLSINQEHPSIAH-----------------------GDNNVFALPQR  687 (1774)
T ss_pred             c-----cCcCHHHHhccccCCceEe--cCCceeeeecccCCCcccc-----------------------CCCcccccccc


Q ss_pred             CCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe-CCeEEEEEcCCeE
Q psy15995        389 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT-GELLYTCGIDDTI  467 (683)
Q Consensus       389 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i  467 (683)
                      ++.-+.-..+.+-...+..-.-.-+++.+++....|.+.... ..+.+......+-.+.|..+..+ ..-|++...+|.+
T Consensus       688 r~~~e~G~~l~Gl~~~~i~a~Avv~~~~fvald~qg~lt~h~-k~g~p~~l~~~gl~G~ik~l~lD~~~nL~Alt~~G~L  766 (1774)
T PF11725_consen  688 RNKVELGDALEGLEDRVITAFAVVNDNKFVALDDQGDLTAHQ-KPGRPVPLSRPGLSGEIKDLALDEKQNLYALTSTGEL  766 (1774)
T ss_pred             cCCCCCCccccCCCcCcceeEEEEcCCceEEeccCCcccccc-CCCCCccCCCCCCCcchhheeeccccceeEecCCCce


Q ss_pred             E
Q psy15995        468 K  468 (683)
Q Consensus       468 ~  468 (683)
                      +
T Consensus       767 f  767 (1774)
T PF11725_consen  767 F  767 (1774)
T ss_pred             e

It is an essential pathogenicity factor of approximately 198 kDa. Its injection into the host-plant is dependent upon the bacterial type III or Hrp secretion system []. The family is long and carries a number of predicted functional regions, including an ERMS or endoplasmic reticulum membrane retention signal at both the C- and the N-termini, a leucine-zipper motif from residues 539-560, and a nuclear localisation signal at 1358-1361. This conserved AvrE-family of effectors is among the few that are required for full virulence of many phytopathogenic pseudomonads, erwinias and pantoeas [].

>KOG1916|consensus

Probab=93.18  E-value=0.18  Score=51.82  Aligned_cols=63  Identities=21%  Similarity=0.251  Sum_probs=48.1

Q ss_pred             eCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEE-----------ECCCCcEEEEecCCCCEEEEeCC
Q psy15995         52 GDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAK-----------YSPSGFYIASGDISGKVRIWDTV  115 (683)
Q Consensus        52 ~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~-----------~s~d~~~las~~~dg~i~iwd~~  115 (683)
                      |-+..-++.++ .++.|.+.++++... ..+.+|...++.++           +||||+.+|.+..||.++.|.+.
T Consensus       191 ~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  191 IAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             cccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence            34456777777 567888887766554 55677988887776           48999999999999998888764

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=93.15  E-value=0.69  Score=40.65  Aligned_cols=71  Identities=8%  Similarity=0.038  Sum_probs=52.9

Q ss_pred             ECCCCCEEEEEeCCCeEEEEECCCCcccccc------cee------eecccEEEEEecCCCCeEEEeecCCcEEEEeCCC
Q psy15995        572 FSPSNEYLVASDAHRKVVLYRVPDFELAHNK------EWG------FHSAKVNCVAWSPDSALVASGSLDTTIIIWSLAS  639 (683)
Q Consensus       572 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~------~~~------~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~  639 (683)
                      +..++++|++...+|.+++||+.+++.....      ...      .....|..+.++.+|.-|++-+ +|..+.|+.+-
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L   96 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL   96 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence            4457889999999999999999987765433      110      1456789999998998887765 57889999765


Q ss_pred             Ccee
Q psy15995        640 PAKH  643 (683)
Q Consensus       640 ~~~~  643 (683)
                      +.-.
T Consensus        97 ~~W~  100 (219)
T PF07569_consen   97 GCWI  100 (219)
T ss_pred             ceeE
Confidence            4433

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=93.05  E-value=6.2  Score=35.12  Aligned_cols=232  Identities=16%  Similarity=0.139  Sum_probs=134.8

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCc
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTS  221 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~  221 (683)
                      .....++-.|||..-.++...+.|---|..+|+... +.+ +.......+..-|||..-++-+..  . +.-.+.++.+.
T Consensus        62 ~ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~~-ypL-g~Ga~Phgiv~gpdg~~Witd~~~--a-I~R~dpkt~ev  136 (353)
T COG4257          62 SAPFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVET-YPL-GSGASPHGIVVGPDGSAWITDTGL--A-IGRLDPKTLEV  136 (353)
T ss_pred             CCccccccCCCCceEEecCccccceecCCCCCceEE-Eec-CCCCCCceEEECCCCCeeEecCcc--e-eEEecCcccce
Confidence            445667788899888888888888888888887432 222 223556777888887654443221  1 12222222211


Q ss_pred             -eee--eecCCcCeEEEEeecCCCeEEEEeeC---------CCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEE
Q psy15995        222 -VGE--ISGQSKPINSCDFKPSRPFRIITGSE---------DNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFAS  289 (683)
Q Consensus       222 -~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~---------d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  289 (683)
                       ...  .+.-........|.+.|.. -+++..         .+.|++|+...          ...-..++..|+|..-++
T Consensus       137 t~f~lp~~~a~~nlet~vfD~~G~l-WFt~q~G~yGrLdPa~~~i~vfpaPq----------G~gpyGi~atpdGsvwya  205 (353)
T COG4257         137 TRFPLPLEHADANLETAVFDPWGNL-WFTGQIGAYGRLDPARNVISVFPAPQ----------GGGPYGICATPDGSVWYA  205 (353)
T ss_pred             EEeecccccCCCcccceeeCCCccE-EEeeccccceecCcccCceeeeccCC----------CCCCcceEECCCCcEEEE
Confidence             111  1223456778889999874 555542         23445554332          234567888999997777


Q ss_pred             EcCCCcEEEEeCCCCeeEEeccCC-ccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEE
Q psy15995        290 AGFDGKVFLYDGASADLVSELGNP-AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCL  368 (683)
Q Consensus       290 ~~~dg~i~iw~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  368 (683)
                      .-.+..|...|..++.. ..+..+ .....-..+--+|.++.-++....+.+..+|........--....+.....+.+.
T Consensus       206 slagnaiaridp~~~~a-ev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW~eypLPgs~arpys~rVD  284 (353)
T COG4257         206 SLAGNAIARIDPFAGHA-EVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSWIEYPLPGSKARPYSMRVD  284 (353)
T ss_pred             eccccceEEcccccCCc-ceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccceeeeCCCCCCCcceeeec
Confidence            66677788888777633 222222 1234455666677888888877788888888877663322223334444444444


Q ss_pred             ecCCEEEEEecCCcEEEEecCC
Q psy15995        369 WQGDYLLTVSLSGFISYLDVNN  390 (683)
Q Consensus       369 ~~~~~l~~~~~~g~i~~~~~~~  390 (683)
                      ..+..-+.-...|.|.-+|.++
T Consensus       285 ~~grVW~sea~agai~rfdpet  306 (353)
T COG4257         285 RHGRVWLSEADAGAIGRFDPET  306 (353)
T ss_pred             cCCcEEeeccccCceeecCccc
Confidence            4444444444455566666553

>PLN02153 epithiospecifier protein

Probab=93.03  E-value=9  Score=36.93  Aligned_cols=110  Identities=10%  Similarity=0.046  Sum_probs=54.8

Q ss_pred             cCCCEEEEEcCC-----------CcEEEEEcCCCccCcceeec----CCcCeeEEEECCCCCEEEEEeC-----------
Q psy15995        531 HEHGLVAVGGAD-----------SKVHIYELNNKSLSPKAELD----HLGPVTDCSFSPSNEYLVASDA-----------  584 (683)
Q Consensus       531 ~~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~-----------  584 (683)
                      -++++++.|+.+           ..+.+||..+.+........    .........  -++++.+.++.           
T Consensus       136 ~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~gG~~~  213 (341)
T PLN02153        136 DENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRGGAGFAV--VQGKIWVVYGFATSILPGGKSD  213 (341)
T ss_pred             ECCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCCcceEEE--ECCeEEEEeccccccccCCccc
Confidence            345566666643           24778888876544222111    111111222  35666565542           


Q ss_pred             --CCeEEEEECCCCccccccceee-ecccEEEEEecCCCCeEEEeecC--------------CcEEEEeCCCCce
Q psy15995        585 --HRKVVLYRVPDFELAHNKEWGF-HSAKVNCVAWSPDSALVASGSLD--------------TTIIIWSLASPAK  642 (683)
Q Consensus       585 --d~~i~i~~~~~~~~~~~~~~~~-h~~~v~~~~~s~d~~~l~~~~~d--------------~~v~iw~~~~~~~  642 (683)
                        ...+.+||..+.+.......+. .......-+...++++++.|+..              ..+..+|+.+.+-
T Consensus       214 ~~~~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~W  288 (341)
T PLN02153        214 YESNAVQFFDPASGKWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVW  288 (341)
T ss_pred             eecCceEEEEcCCCcEEeccccCCCCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCccEE
Confidence              2468899988776543321100 11111111122357788888752              2577888776554

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=92.82  E-value=9.3  Score=36.59  Aligned_cols=81  Identities=17%  Similarity=0.329  Sum_probs=48.8

Q ss_pred             eeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceee------cCCcCeeEEEEC--CCC-CEEE-EEeC
Q psy15995        515 VSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL------DHLGPVTDCSFS--PSN-EYLV-ASDA  584 (683)
Q Consensus       515 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~v~~~~~s--~~~-~~l~-~~~~  584 (683)
                      ++.+....++..+.+......|.++-++.-|.-|+.+.........+      .....|..+++-  +++ .||+ +.-.
T Consensus       201 VR~f~~~sQ~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG  280 (381)
T PF02333_consen  201 VREFKVGSQPEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQG  280 (381)
T ss_dssp             EEEEE-SS-EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGG
T ss_pred             EEEecCCCcceEEEEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCC
Confidence            34444445678888888889999999998888888764322111111      123456677663  333 3454 4446


Q ss_pred             CCeEEEEECCC
Q psy15995        585 HRKVVLYRVPD  595 (683)
Q Consensus       585 d~~i~i~~~~~  595 (683)
                      +++..||+...
T Consensus       281 ~~sf~Vy~r~~  291 (381)
T PF02333_consen  281 DNSFAVYDREG  291 (381)
T ss_dssp             GTEEEEEESST
T ss_pred             CCeEEEEecCC
Confidence            77899999875

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=92.81  E-value=9.8  Score=36.79  Aligned_cols=42  Identities=10%  Similarity=0.071  Sum_probs=21.5

Q ss_pred             eEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCC
Q psy15995        587 KVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDT  630 (683)
Q Consensus       587 ~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~  630 (683)
                      .+.+||.++.+......+.  ...-...+..-++++++.|+.+.
T Consensus       291 ~~e~yd~~~~~W~~~~~lp--~~~~~~~~~~~~~~iyv~GG~~~  332 (346)
T TIGR03547       291 SSEVYALDNGKWSKVGKLP--QGLAYGVSVSWNNGVLLIGGENS  332 (346)
T ss_pred             EeeEEEecCCcccccCCCC--CCceeeEEEEcCCEEEEEeccCC
Confidence            4678888766554332221  11111223334677777777653

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=92.63  E-value=11  Score=36.86  Aligned_cols=148  Identities=13%  Similarity=0.137  Sum_probs=86.9

Q ss_pred             CCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCce--eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc
Q psy15995        186 GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSV--GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK  263 (683)
Q Consensus       186 ~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  263 (683)
                      +....+..++|+.++++...+    ..+..++.|...  ..-......+..+.+.+++.  ++..+.+|.+..-+ ..++
T Consensus       239 Gsf~~v~~~~dG~~~~vg~~G----~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~--l~l~g~~G~l~~S~-d~G~  311 (398)
T PLN00033        239 GTFSTVNRSPDGDYVAVSSRG----NFYLTWEPGQPYWQPHNRASARRIQNMGWRADGG--LWLLTRGGGLYVSK-GTGL  311 (398)
T ss_pred             cceeeEEEcCCCCEEEEECCc----cEEEecCCCCcceEEecCCCccceeeeeEcCCCC--EEEEeCCceEEEec-CCCC
Confidence            345566778898877776655    234455566542  22333456688999999987  44455667654433 3332


Q ss_pred             -----eeeeccc--cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEecc-CCccccCeEEEEEccCCCEEEEEE
Q psy15995        264 -----FKMTKQE--HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG-NPAHKGGVYAVAWKPDGTQLLTAS  335 (683)
Q Consensus       264 -----~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~  335 (683)
                           .......  ....+..+.+.++++.+++|. .|.+.... ..++.-.... ...-....+.+.|.++++.+++ +
T Consensus       312 ~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~-~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~-G  388 (398)
T PLN00033        312 TEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAGG-SGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVL-G  388 (398)
T ss_pred             cccccceeecccCCCCcceEEEEEcCCCcEEEEEC-CCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEE-e
Confidence                 1111111  223588999998887666554 67666654 4444433322 1123467889999877665555 4


Q ss_pred             CCCcEEEE
Q psy15995        336 GDKTCKLW  343 (683)
Q Consensus       336 ~dg~i~iw  343 (683)
                      .+|.|.-|
T Consensus       389 ~~G~il~~  396 (398)
T PLN00033        389 NDGVLLRY  396 (398)
T ss_pred             CCcEEEEe
Confidence            67776554

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=92.47  E-value=11  Score=36.48  Aligned_cols=43  Identities=12%  Similarity=-0.184  Sum_probs=22.0

Q ss_pred             CcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecC
Q psy15995        338 KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS  380 (683)
Q Consensus       338 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  380 (683)
                      ..+..||..+.+-...-...............+++..+.|+..
T Consensus       168 ~~v~~YDp~t~~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~~  210 (346)
T TIGR03547       168 KNVLSYDPSTNQWRNLGENPFLGTAGSAIVHKGNKLLLINGEI  210 (346)
T ss_pred             ceEEEEECCCCceeECccCCCCcCCCceEEEECCEEEEEeeee
Confidence            4578888887654432222111112222334467777777653

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=92.14  E-value=11  Score=35.89  Aligned_cols=159  Identities=11%  Similarity=0.135  Sum_probs=87.6

Q ss_pred             CCCcEEEEccCCCEEEEEcCCCc------EEEEEcCCC--cc-----Ccceee-cCCc--------CeeEEEECCCCCEE
Q psy15995        522 YEPSSISLDHEHGLVAVGGADSK------VHIYELNNK--SL-----SPKAEL-DHLG--------PVTDCSFSPSNEYL  579 (683)
Q Consensus       522 ~~~~~~~~~~~~~~l~~~~~dg~------i~i~d~~~~--~~-----~~~~~~-~~~~--------~v~~~~~s~~~~~l  579 (683)
                      ...+.+.+.+++..+++.+++|.      +..+++...  ..     .....+ ...+        ...+|++.++|.++
T Consensus        20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~   99 (326)
T PF13449_consen   20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW   99 (326)
T ss_pred             CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence            34678888865555556666666      655555431  10     000001 0111        34478887888888


Q ss_pred             EEEeCC------CeEEEEECCCCccccccce-------------eeecccEEEEEecCCCCeEEEeec-----CC--c--
Q psy15995        580 VASDAH------RKVVLYRVPDFELAHNKEW-------------GFHSAKVNCVAWSPDSALVASGSL-----DT--T--  631 (683)
Q Consensus       580 ~~~~~d------~~i~i~~~~~~~~~~~~~~-------------~~h~~~v~~~~~s~d~~~l~~~~~-----d~--~--  631 (683)
                      ++.-.+      ..|..++.. |+.......             .......-+|+++|||+.|.++.+     |+  .  
T Consensus       100 is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~  178 (326)
T PF13449_consen  100 ISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANP  178 (326)
T ss_pred             EEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccccc
Confidence            887777      788888876 444322110             114456889999999996665443     22  1  


Q ss_pred             -----EEEEeCC--C-Ccee--eEeecCC-----CCCCeeEEEEccCCeEEEee------CCCcEEEEeec
Q psy15995        632 -----IIIWSLA--S-PAKH--IIIKNAH-----PQSQITRLQWLDNDLLVSVG------QDCNTKIWEIA  681 (683)
Q Consensus       632 -----v~iw~~~--~-~~~~--~~~~~~~-----~~~~v~~l~~~~~~~l~s~~------~d~~v~vw~~~  681 (683)
                           ++++.+.  + ++..  ..+....     ....|+.+.+.++..|++-=      ....++++.++
T Consensus       179 ~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~  249 (326)
T PF13449_consen  179 DNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVD  249 (326)
T ss_pred             ccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEE
Confidence                 5555544  3 2122  2222211     25688889988444333322      34556776654

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=92.10  E-value=2.9  Score=40.51  Aligned_cols=138  Identities=16%  Similarity=0.197  Sum_probs=83.7

Q ss_pred             CCCCCeEEEe--cCCeEEEEeCCCCcccccccCcccceEEEEECCCCc--------EEEEecCCCCEEEEeCC-Cccccc
Q psy15995         53 DPKGKNFLYT--NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGF--------YIASGDISGKVRIWDTV-NKEHIL  121 (683)
Q Consensus        53 s~~~~~l~~~--~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~--------~las~~~dg~i~iwd~~-~~~~~~  121 (683)
                      ..|..+|...  ..+.++-.|++.|+.+....-|...  -+.|.|+.+        .|+-.|.. .|.--|.. .+..+.
T Consensus       476 ~~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~-svFrIDPR~~gNKi~  552 (776)
T COG5167         476 DNDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDY-SVFRIDPRARGNKIK  552 (776)
T ss_pred             cCCcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeeccc-ceEEecccccCCcee
Confidence            3344444433  2357888899999999888877765  577888543        34333333 33333432 221111


Q ss_pred             ccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEE
Q psy15995        122 KNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMV  201 (683)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  201 (683)
                      ..+...          ........+..-..+ .|+|+++..|.|++||--..+  .+..+++.+..|..+..+.+|++++
T Consensus       553 v~esKd----------Y~tKn~Fss~~tTes-GyIa~as~kGDirLyDRig~r--AKtalP~lG~aIk~idvta~Gk~il  619 (776)
T COG5167         553 VVESKD----------YKTKNKFSSGMTTES-GYIAAASRKGDIRLYDRIGKR--AKTALPGLGDAIKHIDVTANGKHIL  619 (776)
T ss_pred             eeeehh----------ccccccccccccccC-ceEEEecCCCceeeehhhcch--hhhcCcccccceeeeEeecCCcEEE
Confidence            111110          001122223233333 399999999999999965543  3455677778999999999999999


Q ss_pred             EEecC
Q psy15995        202 VVGEG  206 (683)
Q Consensus       202 ~~~~~  206 (683)
                      +.+..
T Consensus       620 aTCk~  624 (776)
T COG5167         620 ATCKN  624 (776)
T ss_pred             Eeecc
Confidence            98876

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=91.76  E-value=1.6  Score=36.90  Aligned_cols=31  Identities=10%  Similarity=0.184  Sum_probs=26.0

Q ss_pred             cceeeeEeeccc------eEEEeecCCccEEEEeccc
Q psy15995        142 TSIRNILVLSIG------FYIASGDISGKVRIWDTVN  172 (683)
Q Consensus       142 ~~i~~~~~s~~~------~~l~~~~~d~~i~iwd~~~  172 (683)
                      ..+..++|||.|      ..||+.+.++.|.||....
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            378899999965      3899999999999998764

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>KOG1983|consensus

Probab=91.74  E-value=5  Score=44.48  Aligned_cols=75  Identities=19%  Similarity=0.162  Sum_probs=47.5

Q ss_pred             eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC
Q psy15995        225 ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA  304 (683)
Q Consensus       225 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  304 (683)
                      +..+..++.+..+....+  .+.+...+.+.+|+.........+....     ...++++..++++..||.+..||...+
T Consensus       194 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~v~~h~Dgs~~fWd~s~g  266 (993)
T KOG1983|consen  194 LSLIEYESLQVLYYSPTK--ILIGFNRGLVVIKDRASKYVQSAYLPNG-----QLESRDGSHFVSYHTDGSYAFWDVSSG  266 (993)
T ss_pred             ccccccccceeeeecCCC--cceeeeeeeeeehhcccccchhhccccc-----ccCccCCceEEEEEecCCEEeeecCCC
Confidence            344555666666655554  4555556777777644433322222111     112888999999999999999999887


Q ss_pred             ee
Q psy15995        305 DL  306 (683)
Q Consensus       305 ~~  306 (683)
                      ..
T Consensus       267 ~~  268 (993)
T KOG1983|consen  267 KL  268 (993)
T ss_pred             ce
Confidence            65

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=91.61  E-value=5.4  Score=31.18  Aligned_cols=88  Identities=8%  Similarity=0.092  Sum_probs=57.1

Q ss_pred             EEECCCCCEEEEEeCCCeEEEEECCCCcccc-----ccceeeecccEEEEEecC-----CCCeEEEeecCCcEEEEeCCC
Q psy15995        570 CSFSPSNEYLVASDAHRKVVLYRVPDFELAH-----NKEWGFHSAKVNCVAWSP-----DSALVASGSLDTTIIIWSLAS  639 (683)
Q Consensus       570 ~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~-----~~~~~~h~~~v~~~~~s~-----d~~~l~~~~~d~~v~iw~~~~  639 (683)
                      -.|......|+++..-|+|.|++........     ...+---...|++|+-.+     +...|+.|+ ...+..||+.+
T Consensus         4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~~   82 (136)
T PF14781_consen    4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVEN   82 (136)
T ss_pred             EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEccc
Confidence            3566666788889999999999876443211     111111346677776543     234566665 55699999999


Q ss_pred             CceeeEeecCCCCCCeeEEEEc
Q psy15995        640 PAKHIIIKNAHPQSQITRLQWL  661 (683)
Q Consensus       640 ~~~~~~~~~~~~~~~v~~l~~~  661 (683)
                      ...+.....   .+.|.++.+-
T Consensus        83 N~d~Fyke~---~DGvn~i~~g  101 (136)
T PF14781_consen   83 NSDLFYKEV---PDGVNAIVIG  101 (136)
T ss_pred             CchhhhhhC---ccceeEEEEE
Confidence            887765544   4678888874

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=91.55  E-value=5.4  Score=35.51  Aligned_cols=153  Identities=11%  Similarity=0.135  Sum_probs=82.3

Q ss_pred             eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecC-C--CCEEEEeCCCcccccccccccCCCCcccceeeeeec
Q psy15995         66 SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDI-S--GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLT  142 (683)
Q Consensus        66 ~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~-d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (683)
                      .-.+||+.+++....-....---.+=++-+||++|.+|+. +  ..+++++..+...-...  .+      ....+....
T Consensus        47 ~s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w--~e------~~~~m~~~R  118 (243)
T PF07250_consen   47 HSVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDW--TE------SPNDMQSGR  118 (243)
T ss_pred             EEEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCc--eE------CcccccCCC
Confidence            3468999888764322111111222346789999999864 3  34888876541000000  00      000122224


Q ss_pred             ceeeeEeeccceEEEeecCCc-cEEEEecccc-ceeeecccc------ccCCCeeEEEEcCCCCeEEEEecCCceEEEEE
Q psy15995        143 SIRNILVLSIGFYIASGDISG-KVRIWDTVNK-EHILKNEFH------PIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF  214 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~~~~~d~-~i~iwd~~~~-~~~~~~~~~------~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~  214 (683)
                      .-......+||+.|+.|+... +..+|.-... .......+.      ....---.+-..|||+.++.+..+    ..++
T Consensus       119 WYpT~~~L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~----s~i~  194 (243)
T PF07250_consen  119 WYPTATTLPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRG----SIIY  194 (243)
T ss_pred             ccccceECCCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCC----cEEE
Confidence            555667788999999888764 3455544211 111111110      011222356678999998888765    4778


Q ss_pred             EccCCCceeeeecCCc
Q psy15995        215 MSETGTSVGEISGQSK  230 (683)
Q Consensus       215 ~~~~~~~~~~~~~~~~  230 (683)
                      ++.+.+.+..+..-.+
T Consensus       195 d~~~n~v~~~lP~lPg  210 (243)
T PF07250_consen  195 DYKTNTVVRTLPDLPG  210 (243)
T ss_pred             eCCCCeEEeeCCCCCC
Confidence            8888776666554333

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=91.46  E-value=11  Score=34.39  Aligned_cols=217  Identities=17%  Similarity=0.179  Sum_probs=114.9

Q ss_pred             eeceEEEEecCCEEEEEecCCcEEEEecCC------CCcceeeeee-----ccccEEEEEEeCCCC------------EE
Q psy15995        361 EDQQVSCLWQGDYLLTVSLSGFISYLDVNN------PSTPIRVIKG-----HNKPITALALSPDRG------------TV  417 (683)
Q Consensus       361 ~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~------~~~~~~~~~~-----~~~~v~~~~~~~~~~------------~l  417 (683)
                      ....+++.|.+..-++....+...+||...      +...+..+..     .....+.+.|+....            .+
T Consensus        24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F  103 (336)
T TIGR03118        24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF  103 (336)
T ss_pred             ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence            445667777777788888888889998861      1122222221     123566777764322            35


Q ss_pred             EEEeCCCcEEEEcCCCCCc---c--eeccCCCCcce-eEEEEe----CCeEEEE-EcCCeEEEEeCCCCcccC------C
Q psy15995        418 FTGSHDGFITRWNAKTGEN---D--RVQGAGHGNQI-NGMKAT----GELLYTC-GIDDTIKQVDLSSNAYSG------P  480 (683)
Q Consensus       418 ~~~~~dg~i~~w~~~~~~~---~--~~~~~~~~~~v-~~~~~~----~~~l~~~-~~d~~i~~~~~~~~~~~~------~  480 (683)
                      +.+++||+|.-|...-...   .  ..........| ..++..    +++|+.+ -..++|.++|-.=.....      +
T Consensus       104 if~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP  183 (336)
T TIGR03118       104 LFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDP  183 (336)
T ss_pred             EEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCC
Confidence            7788999999998643333   1  11111111222 223322    4555444 457888888754332211      1


Q ss_pred             ceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCccee
Q psy15995        481 EVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE  560 (683)
Q Consensus       481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  560 (683)
                      .++..-.|-.+..-.+.++.                        +-..-.++.+.=+.|..-|.|-+||....-+.+...
T Consensus       184 ~iPagyAPFnIqnig~~lyV------------------------tYA~qd~~~~d~v~G~G~G~VdvFd~~G~l~~r~as  239 (336)
T TIGR03118       184 ALPAGYAPFNVQNLGGTLYV------------------------TYAQQDADRNDEVAGAGLGYVNVFTLNGQLLRRVAS  239 (336)
T ss_pred             CCCCCCCCcceEEECCeEEE------------------------EEEecCCcccccccCCCcceEEEEcCCCcEEEEecc
Confidence            11111111111111111110                        111112222222334455789999987654443333


Q ss_pred             ecCCcCeeEEEECC------CCCEEEEEeCCCeEEEEECCCCccccc
Q psy15995        561 LDHLGPVTDCSFSP------SNEYLVASDAHRKVVLYRVPDFELAHN  601 (683)
Q Consensus       561 ~~~~~~v~~~~~s~------~~~~l~~~~~d~~i~i~~~~~~~~~~~  601 (683)
                      .+.-...+.|+..|      .+.+|+---.||+|..||..+++.+..
T Consensus       240 ~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~  286 (336)
T TIGR03118       240 SGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQ  286 (336)
T ss_pred             CCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeee
Confidence            34555667787765      577888877899999999988876543

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=91.39  E-value=8.2  Score=32.79  Aligned_cols=176  Identities=13%  Similarity=0.141  Sum_probs=88.2

Q ss_pred             cceEEEeecCC--ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCC
Q psy15995        152 IGFYIASGDIS--GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQS  229 (683)
Q Consensus       152 ~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (683)
                      +|.++.+.+.-  ..|++||+.+++.+....+.+  ..+..=-...-+.++....... .....++.++-+.+..+.-. 
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~--~~~FgEGit~~gd~~y~LTw~e-gvaf~~d~~t~~~lg~~~y~-  130 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAP--DTVFGEGITKLGDYFYQLTWKE-GVAFKYDADTLEELGRFSYE-  130 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCC--ccccccceeeccceEEEEEecc-ceeEEEChHHhhhhcccccC-
Confidence            45666666553  469999999998877666552  1121111111233333322221 12345555554444443321 


Q ss_pred             cCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecccc--c---cCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC
Q psy15995        230 KPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH--S---RFVQAVRYSPSGSHFASAGFDGKVFLYDGASA  304 (683)
Q Consensus       230 ~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--~---~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  304 (683)
                      +.=+.+  ..++.. |+.+....+++.-|.++.....+.+-.  .   ..++.+.|- +|...|-.=.+..|...+.++|
T Consensus       131 GeGWgL--t~d~~~-LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sG  206 (262)
T COG3823         131 GEGWGL--TSDDKN-LIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSG  206 (262)
T ss_pred             Ccceee--ecCCcc-eEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCC
Confidence            112223  334443 666666667777776655443333211  1   112233332 4544444444455666666777


Q ss_pred             eeEEeccCC----------ccccCeEEEEEccCCCEEEEEE
Q psy15995        305 DLVSELGNP----------AHKGGVYAVAWKPDGTQLLTAS  335 (683)
Q Consensus       305 ~~~~~~~~~----------~~~~~i~~~~~~~~~~~l~~~~  335 (683)
                      +.+..+...          .+..-...+++.|+...++..+
T Consensus       207 rV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         207 RVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             cEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence            665554321          1445677899999775554443

>KOG4460|consensus

Probab=91.38  E-value=7.2  Score=38.19  Aligned_cols=101  Identities=19%  Similarity=0.189  Sum_probs=54.1

Q ss_pred             CCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccc
Q psy15995        520 IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELA  599 (683)
Q Consensus       520 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~  599 (683)
                      ...++..+..++.|..++..+.+|.+.++=.+..... ....+....|+|=.++-+.+ +++.+                
T Consensus       102 V~feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~-s~~eDgk~~v~CRt~~i~~~-~ftss----------------  163 (741)
T KOG4460|consen  102 VLFEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKN-SEFEDGKSTVNCRTTPVAER-FFTSS----------------  163 (741)
T ss_pred             ceEEEEEEEecCCCceEEEecCCeeEEEEchhhcCcc-ceecCCCceEEEEeecccce-eeccC----------------
Confidence            4456788899999999999999985544321111100 00001111223222221111 11111                


Q ss_pred             cccceeeecccEEEEEecCCC---CeEEEeecCCcEEEEeCCCCceeeE
Q psy15995        600 HNKEWGFHSAKVNCVAWSPDS---ALVASGSLDTTIIIWSLASPAKHII  645 (683)
Q Consensus       600 ~~~~~~~h~~~v~~~~~s~d~---~~l~~~~~d~~v~iw~~~~~~~~~~  645 (683)
                             ..-.+...+|+|+.   ..|..-+.|..+|+|++.....+..
T Consensus       164 -------~~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~telyl  205 (741)
T KOG4460|consen  164 -------TSLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTELYL  205 (741)
T ss_pred             -------CceeeeeccccCCccCCceEEEEecCcEEEEEecCCcchhhc
Confidence                   11234556777764   5677777788888888877665533

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=91.35  E-value=0.75  Score=40.44  Aligned_cols=79  Identities=16%  Similarity=0.204  Sum_probs=49.7

Q ss_pred             ECCCCcEEEEecCCCCEEEEeCCCccccccc-ccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEecc
Q psy15995         93 YSPSGFYIASGDISGKVRIWDTVNKEHILKN-EFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTV  171 (683)
Q Consensus        93 ~s~d~~~las~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~  171 (683)
                      +..++++|.+.+.+|.+++||+.+++.+... ...+.-.... .........|..+.++.+|.-|++-+ +|....|+..
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~-~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~   95 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSP-VSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPD   95 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccc-cccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccc
Confidence            4467889999999999999999998766543 2111100000 00002335677788888887666554 4677888765


Q ss_pred             cc
Q psy15995        172 NK  173 (683)
Q Consensus       172 ~~  173 (683)
                      -+
T Consensus        96 L~   97 (219)
T PF07569_consen   96 LG   97 (219)
T ss_pred             cc
Confidence            44

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]

Probab=91.24  E-value=22  Score=37.58  Aligned_cols=281  Identities=16%  Similarity=0.195  Sum_probs=138.4

Q ss_pred             cccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEe------eCCCe--
Q psy15995        182 HPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITG------SEDNT--  253 (683)
Q Consensus       182 ~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~------~~d~~--  253 (683)
                      ......+..+.|+|+++.++...........+|....+.   ....+...+....|+|++.. ++..      ..++.  
T Consensus        56 ~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~g---~~~~~~~~v~~~~~~~~g~~-~~~~~~~~~~~~~~~~~  131 (620)
T COG1506          56 LTFGGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVGG---LITKTAFGVSDARWSPDGDR-IAFLTAEGASKRDGGDH  131 (620)
T ss_pred             cccCCcccccccCCCCCEEEEEeccCCCcceEEEEecCC---ceeeeecccccceeCCCCCe-EEEEecccccccCCcee
Confidence            334577889999999999999984444444555554332   45556667788888888875 4331      11222  


Q ss_pred             -----EEEEcCCCC-c-----------eeeeccccccCeEEEEECCCCCEEEEEcCCCc-------EEEEeCCCCeeEEe
Q psy15995        254 -----IAVFEGPPF-K-----------FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGK-------VFLYDGASADLVSE  309 (683)
Q Consensus       254 -----i~iw~~~~~-~-----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------i~iw~~~~~~~~~~  309 (683)
                           +.+|....+ +           ...........+....+++++..++....+..       ..++...++.....
T Consensus       132 ~~~~~~~~~~~~~g~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (620)
T COG1506         132 LFVDRLPVWFDGRGGERSDLYVVDIESKLIKLGLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGELESL  211 (620)
T ss_pred             eeecccceeecCCCCcccceEEEccCcccccccCCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCCceEEE
Confidence                 223322222 1           11222234455667777777776666554332       33333334444444


Q ss_pred             ccCCccccCeEEEEEccCCCEEEEEECCCc--------EEEEECCCCceeeEEEecCc--ceeceEEE-EecCCEEEEEe
Q psy15995        310 LGNPAHKGGVYAVAWKPDGTQLLTASGDKT--------CKLWDIETKSVVSEFIMGNQ--VEDQQVSC-LWQGDYLLTVS  378 (683)
Q Consensus       310 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~--------i~iwd~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~l~~~~  378 (683)
                      ..   ....+..+.+.++++.++..+....        +.+++.+.+.... ......  ........ ..+...+++..
T Consensus       212 ~~---~~~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (620)
T COG1506         212 TP---GEGSISKLAFDADGKSIALLGTESDRGLAEGDFILLLDGELGEVDG-DLSSGDDTRGAWAVEGGLDGDGLLFIAT  287 (620)
T ss_pred             cC---CCceeeeeeeCCCCCeeEEeccCCccCccccceEEEEeccccccce-eeccCCcccCcHHhccccCCCcEEEEEe
Confidence            33   4556888899999885555443221        3333322222211 000100  00001111 12233333444


Q ss_pred             c-CCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeC----CCcEEEEcCCCCCcceeccCCCCcceeEEEE
Q psy15995        379 L-SGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSH----DGFITRWNAKTGENDRVQGAGHGNQINGMKA  453 (683)
Q Consensus       379 ~-~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~  453 (683)
                      . .+...++.............+....+..+.+  ++..++....    -..+.+++.  ++..... ............
T Consensus       288 ~~~g~~~l~~~~~~~~~~~~~~~~~~~v~~f~~--~~~~~~~~~s~~~~p~~i~~~~~--~~~~~~~-~~~~~~~~~~~~  362 (620)
T COG1506         288 DGGGSSPLFRVDDLGGGVEGLSGDDGGVPGFDV--DGRKLALAYSSPTEPPEIYLYDR--GEEAKLT-SSNNSGLKKVKL  362 (620)
T ss_pred             cCCCceEEEEEeccCCceeeecCCCceEEEEee--CCCEEEEEecCCCCccceEEEcC--CCceEEe-eccccccccccc
Confidence            3 5777777766433333444444455666655  5555554322    245777765  2111111 112222223333


Q ss_pred             e-CCeEEEEEcCC-eEEEEeCCCC
Q psy15995        454 T-GELLYTCGIDD-TIKQVDLSSN  475 (683)
Q Consensus       454 ~-~~~l~~~~~d~-~i~~~~~~~~  475 (683)
                      . .+.+..-+.|| +|.-|-+...
T Consensus       363 ~~~e~~~~~~~dG~~i~~~l~~P~  386 (620)
T COG1506         363 AEPEPVTYKSNDGETIHGWLYKPP  386 (620)
T ss_pred             CCceEEEEEcCCCCEEEEEEecCC
Confidence            3 34444555566 6777765543

>KOG2247|consensus

Probab=91.15  E-value=0.038  Score=52.33  Aligned_cols=150  Identities=10%  Similarity=0.154  Sum_probs=97.3

Q ss_pred             CeeEEEEcCCCCeEEEEecCCceEEEEEEcc-CCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee
Q psy15995        187 PIKDIAWSPDNQRMVVVGEGRERFGHVFMSE-TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK  265 (683)
Q Consensus       187 ~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  265 (683)
                      ......|.|.+..+++++....    +...+ .++...++ ..++....++|..+++-.++.+-..+.+.+||+.+....
T Consensus        36 ~pi~~~w~~e~~nlavaca~ti----v~~YD~agq~~le~-n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytq  110 (615)
T KOG2247|consen   36 GPIIHRWRPEGHNLAVACANTI----VIYYDKAGQVILEL-NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQ  110 (615)
T ss_pred             ccceeeEecCCCceehhhhhhH----HHhhhhhcceeccc-CCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHH
Confidence            3445667777777777765531    11222 22222222 233445577888888777778888899999998765432


Q ss_pred             eeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEE
Q psy15995        266 MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWD  344 (683)
Q Consensus       266 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  344 (683)
                      +.-.+-...-.-+.|++.+..++.+...|.+.+++..+.+.+.....  |...++++++.+.+. .+.++.|..+.+-.
T Consensus       111 qLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gk--h~RRgtq~av~lEd~-vil~dcd~~L~v~~  186 (615)
T KOG2247|consen  111 QLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGK--HQRRGTQIAVTLEDY-VILCDCDNTLSVTT  186 (615)
T ss_pred             HHhccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcc--cccceeEEEecccce-eeecCcHHHHHHhh
Confidence            22222222222378999999999999999999999887776666654  889999999999775 45555555554443

>PRK13613 lipoprotein LpqB; Provisional

Probab=90.98  E-value=22  Score=37.01  Aligned_cols=200  Identities=11%  Similarity=0.049  Sum_probs=100.2

Q ss_pred             cCccc-ceEEEEECCCCcEEEEecCCC-CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEee
Q psy15995         82 TEHSC-AVNVAKYSPSGFYIASGDISG-KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASG  159 (683)
Q Consensus        82 ~~h~~-~v~~~~~s~d~~~las~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  159 (683)
                      .++.. .+.+++.|+++..+|..+.++ .+.+..+..+.....   +        ............-.|.++| ++-+.
T Consensus       358 ~g~~~~~~~s~avS~~g~~~A~v~~~~~~l~vg~~~~~~~~~~---~--------~~~~~~~~~Lt~PS~d~~g-~vWtv  425 (599)
T PRK13613        358 LGSGRVPLRRVAVSRDESRAAGISADGDSVYVGSLTPGASIGV---H--------SWGVTADGRLTSPSWDGRG-DLWVV  425 (599)
T ss_pred             cCCCCCCccceEEcCCCceEEEEcCCCcEEEEeccCCCCcccc---c--------cceeeccCcccCCcCcCCC-CEEEe
Confidence            34544 788999999999998877665 466655433322000   0        0000001234444555555 23222


Q ss_pred             c--CCc--cEEEEeccccceeeeccccccCC-CeeEEEEcCCCCeEEEEecC----CceEEEEEEccCCC-ceee---ee
Q psy15995        160 D--ISG--KVRIWDTVNKEHILKNEFHPIGG-PIKDIAWSPDNQRMVVVGEG----RERFGHVFMSETGT-SVGE---IS  226 (683)
Q Consensus       160 ~--~d~--~i~iwd~~~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~~~----~~~~~~~~~~~~~~-~~~~---~~  226 (683)
                      .  .++  .+++..- +++... .......+ .|..+..|+||..+++..+.    .-....|..-..|. .+..   +.
T Consensus       426 d~~~~~~~vl~v~~~-~G~~~~-V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g~~~v~va~V~R~~~G~~~l~~~~~l~  503 (599)
T PRK13613        426 DRDPADPRLLWLLQG-DGEPVE-VRTPELDGHRVVAVRVARDGVRVALIVEKDGRRSLQIGRIVRDAKAVVSVEEFRSLA  503 (599)
T ss_pred             cCCCCCceEEEEEcC-CCcEEE-eeccccCCCEeEEEEECCCccEEEEEEecCCCcEEEEEEEEeCCCCcEEeeccEEec
Confidence            1  122  2445443 333321 22222334 89999999999999987752    11222333333443 1111   22


Q ss_pred             cCCcCeEEEEeecCCCeEEEEee-CCCeEEEEc--CCCCceeeeccccccCeEEEEECCCCC-EEEEEcCCCcE
Q psy15995        227 GQSKPINSCDFKPSRPFRIITGS-EDNTIAVFE--GPPFKFKMTKQEHSRFVQAVRYSPSGS-HFASAGFDGKV  296 (683)
Q Consensus       227 ~~~~~v~~~~~~~~~~~~l~~~~-~d~~i~iw~--~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i  296 (683)
                      .....+.+++|..++.. ++.+. .++...+|.  +............-..+..++-..+.. .++.+..++.|
T Consensus       504 ~~l~~v~~~~W~~~~sL-~Vlg~~~~~~~~v~~v~vdG~~~~~~~~~~v~~~~~ia~~~~~~~~~v~~~~~~~v  576 (599)
T PRK13613        504 PELEDVTDMSWAGDSQL-VVLGREEGGVQQARYVQVDGSTPPASAPAAVTGVESITASEDERLPLVAGTSEDGI  576 (599)
T ss_pred             cCCCccceeEEcCCCEE-EEEeccCCCCcceEEEecCCcCcccccccCCCCeeEEEecCCCCceEEEEecCCCe
Confidence            22335899999999984 44342 333444443  332222222223444566666666655 44442445554

>KOG0783|consensus

Probab=90.85  E-value=17  Score=38.11  Aligned_cols=70  Identities=13%  Similarity=0.093  Sum_probs=44.7

Q ss_pred             EEeeCCCCCeEEEe--cCCeEEEEeCCCCcccccccC-cccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccc
Q psy15995         49 VLGGDPKGKNFLYT--NGNSVIIRNIENPAISDIYTE-HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHI  120 (683)
Q Consensus        49 ~~~~s~~~~~l~~~--~~~~i~v~~~~~~~~~~~~~~-h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~  120 (683)
                      .+-.+..|+..++|  .||.+-+=|.+..-..+..+| ....|.+++.+.+-.++.|  .+|.|.-|-++...++
T Consensus       189 Svfl~~kgqvY~cGhG~GGRlG~gdeq~~~iPkrV~gL~gh~~~qisvs~~HslvLT--~~g~Vys~GlN~~hqL  261 (1267)
T KOG0783|consen  189 SVFLTEKGQVYVCGHGAGGRLGFGDEQYNFIPKRVPGLIGHKVIQISVSHTHSLVLT--KFGSVYSWGLNGSHQL  261 (1267)
T ss_pred             eeEecCCCcEEEeccCCCCccCcCcccccccccccccccccceEEEEeecceeEEEe--ecceEEEeecCccccc
Confidence            34456778866666  456666555555433333333 3345889998888766554  6889999998876444

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=90.10  E-value=32  Score=37.51  Aligned_cols=161  Identities=16%  Similarity=0.153  Sum_probs=98.5

Q ss_pred             ccCCCeeEEEEc---C----CCCeEEEEecCCceEEEEEEccC---------------CCceeeee---cCCcCeEEEEe
Q psy15995        183 PIGGPIKDIAWS---P----DNQRMVVVGEGRERFGHVFMSET---------------GTSVGEIS---GQSKPINSCDF  237 (683)
Q Consensus       183 ~~~~~i~~~~~s---~----~~~~l~~~~~~~~~~~~~~~~~~---------------~~~~~~~~---~~~~~v~~~~~  237 (683)
                      ....+|..++|.   .    ..++|++-....   ..|+...-               ..++..+.   ....+...++|
T Consensus        77 ~~~~PI~qI~fa~~~~~~~~~~~~l~Vrt~~s---t~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~F  153 (765)
T PF10214_consen   77 DDGSPIKQIKFATLSESFDEKSRWLAVRTETS---TTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAF  153 (765)
T ss_pred             CCCCCeeEEEecccccccCCcCcEEEEEcCCE---EEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEe
Confidence            345789999998   2    224666555443   23333110               12233333   23456789999


Q ss_pred             ecCCCeEEEEeeCCCeEEEEcCCCCc-----eeeeccccc----------cCeEEEEECCCCCEEEEEcCCCcEEEEeCC
Q psy15995        238 KPSRPFRIITGSEDNTIAVFEGPPFK-----FKMTKQEHS----------RFVQAVRYSPSGSHFASAGFDGKVFLYDGA  302 (683)
Q Consensus       238 ~~~~~~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  302 (683)
                      +|.....++.....|...||++....     .......+.          ..-..+.|.++-+.|++++. ..+.++|++
T Consensus       154 nP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r-~~l~~~d~~  232 (765)
T PF10214_consen  154 NPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNR-SKLMLIDFE  232 (765)
T ss_pred             ccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcC-CceEEEECC
Confidence            99887789999999999999982111     111111111          22337889888888888874 679999999


Q ss_pred             CCeeEEeccCCccccCeEEEEEccCC-CEEEEEECCCcEEEEECCCC
Q psy15995        303 SADLVSELGNPAHKGGVYAVAWKPDG-TQLLTASGDKTCKLWDIETK  348 (683)
Q Consensus       303 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~  348 (683)
                      +......+........|..+.-+|+. .+++.-+ ...|...+....
T Consensus       233 ~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLT-s~eiiw~~~~~~  278 (765)
T PF10214_consen  233 SNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILT-SKEIIWLDVKSS  278 (765)
T ss_pred             CCCccchhccCCChhheeeEEecCCccceEEEEe-cCeEEEEEccCC
Confidence            87664423333366789999988862 2233322 356777777763

These proteins are found in fungi.

>PLN02193 nitrile-specifier protein

Probab=89.99  E-value=24  Score=35.84  Aligned_cols=111  Identities=12%  Similarity=0.073  Sum_probs=57.5

Q ss_pred             cCCCEEEEEcCCC-----cEEEEEcCCCccCcceee----cCCcCeeEEEECCCCCEEEEEeCC----CeEEEEECCCCc
Q psy15995        531 HEHGLVAVGGADS-----KVHIYELNNKSLSPKAEL----DHLGPVTDCSFSPSNEYLVASDAH----RKVVLYRVPDFE  597 (683)
Q Consensus       531 ~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~d----~~i~i~~~~~~~  597 (683)
                      -++++++.|+.++     .+..||+.+.+.......    ..........  -+++.++.++.+    ..+.+||+.+.+
T Consensus       277 ~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~~~~~--~~gkiyviGG~~g~~~~dv~~yD~~t~~  354 (470)
T PLN02193        277 DEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEV--VQGKVWVVYGFNGCEVDDVHYYDPVQDK  354 (470)
T ss_pred             ECCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCcEEEE--ECCcEEEEECCCCCccCceEEEECCCCE
Confidence            3556667776543     467888877654321110    0111111222  256777776654    468999998876


Q ss_pred             cccccceee-ecccEEEEEecCCCCeEEEeecC--------------CcEEEEeCCCCcee
Q psy15995        598 LAHNKEWGF-HSAKVNCVAWSPDSALVASGSLD--------------TTIIIWSLASPAKH  643 (683)
Q Consensus       598 ~~~~~~~~~-h~~~v~~~~~s~d~~~l~~~~~d--------------~~v~iw~~~~~~~~  643 (683)
                      .......+. .......-+..-++++++.|+.+              ..+.+||+.+.+-.
T Consensus       355 W~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t~~W~  415 (470)
T PLN02193        355 WTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQWE  415 (470)
T ss_pred             EEEeccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEEcCcCEEE
Confidence            543321100 00111111122367788888853              24788888876544

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=89.63  E-value=8.5  Score=30.16  Aligned_cols=112  Identities=14%  Similarity=0.105  Sum_probs=71.3

Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCccC------cceeecCCcCeeEEEECC-----CCCEEEEEeCCCeEEEEECCCC
Q psy15995        528 SLDHEHGLVAVGGADSKVHIYELNNKSLS------PKAELDHLGPVTDCSFSP-----SNEYLVASDAHRKVVLYRVPDF  596 (683)
Q Consensus       528 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~------~~~~~~~~~~v~~~~~s~-----~~~~l~~~~~d~~i~i~~~~~~  596 (683)
                      .|.....-|++++..|+|.|++.......      ....+.-...|++++-.+     +...|+.|+ ...+..||+...
T Consensus         5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~~N   83 (136)
T PF14781_consen    5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVENN   83 (136)
T ss_pred             EeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEcccC
Confidence            34555567888888999999987654321      123344567788886544     345666665 566999999987


Q ss_pred             ccccccceeeecccEEEEEecC---CCCeEEEeecCCcEEEEeCCCCcee
Q psy15995        597 ELAHNKEWGFHSAKVNCVAWSP---DSALVASGSLDTTIIIWSLASPAKH  643 (683)
Q Consensus       597 ~~~~~~~~~~h~~~v~~~~~s~---d~~~l~~~~~d~~v~iw~~~~~~~~  643 (683)
                      .-+...+.   ...|+++.+-.   ...-|+..+.+..|.-||.+-.+..
T Consensus        84 ~d~Fyke~---~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~f  130 (136)
T PF14781_consen   84 SDLFYKEV---PDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIF  130 (136)
T ss_pred             chhhhhhC---ccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEE
Confidence            66554443   36677777632   2234555555777888886655543

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=89.47  E-value=1.3  Score=25.83  Aligned_cols=35  Identities=23%  Similarity=0.299  Sum_probs=0.0

Q ss_pred             cccccCcccceEEEEECCCCcEEEEec-CC--CCEEEE
Q psy15995         78 SDIYTEHSCAVNVAKYSPSGFYIASGD-IS--GKVRIW  112 (683)
Q Consensus        78 ~~~~~~h~~~v~~~~~s~d~~~las~~-~d--g~i~iw  112 (683)
                      +..+......-...+|||||++|+-++ .+  |.-.||
T Consensus         1 l~~~t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    1 LKQLTNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             -EEES-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             CcCcccCCccccCEEEecCCCEEEEEecCCCCCCcCEE

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=89.34  E-value=30  Score=36.14  Aligned_cols=72  Identities=22%  Similarity=0.409  Sum_probs=41.5

Q ss_pred             EEEEECCCCCEEEEEcCCC-----cEEEEeCCCCeeEEeccC-CccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCc
Q psy15995        276 QAVRYSPSGSHFASAGFDG-----KVFLYDGASADLVSELGN-PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       276 ~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      ..+.|-|+|..+++-..||     .|.++.. +|-.-..+.. .+.......++|+-....++.+ ..+.+++|-..+-.
T Consensus       250 ~~LSWkpqgS~~ati~td~~~~S~~ViFfEr-NGLrHGef~lr~~~dEk~~~~~wn~~s~vlav~-~~n~~~lwttkNyh  327 (1243)
T COG5290         250 HQLSWKPQGSKYATIGTDGCSTSESVIFFER-NGLRHGEFDLRVGCDEKAFLENWNLLSTVLAVA-EGNLLKLWTTKNYH  327 (1243)
T ss_pred             hccccccCCceeeeeccCCCCCcceEEEEcc-CCcccCCccccCCchhhhhhhhhhHHHHHHHHh-hcceEEEEEccceE
Confidence            4588999999999877665     3555552 2211111100 0134455667776655555544 34578999766543

>PLN02193 nitrile-specifier protein

Probab=89.24  E-value=27  Score=35.44  Aligned_cols=140  Identities=8%  Similarity=0.054  Sum_probs=69.1

Q ss_pred             cCCCEEEEEcCC-----CcEEEEEcCCCccCcceeec--CCcCeeEEEECCCCCEEEEEeCC-----CeEEEEECCCCcc
Q psy15995        531 HEHGLVAVGGAD-----SKVHIYELNNKSLSPKAELD--HLGPVTDCSFSPSNEYLVASDAH-----RKVVLYRVPDFEL  598 (683)
Q Consensus       531 ~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~~~~~~~~  598 (683)
                      -++.+.+.|+.+     ..+..||+.+.+........  ....-...+..-++++.+.|+.+     ..+..||+.+.+.
T Consensus       227 ~~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W  306 (470)
T PLN02193        227 IGSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKW  306 (470)
T ss_pred             ECCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCEE
Confidence            345566666654     35888898876544222211  00011111122356666666644     3467888877654


Q ss_pred             cccccee---eecccEEEEEecCCCCeEEEeecC----CcEEEEeCCCCceeeEeecC-CCCC-CeeEEEEccCCeEEEe
Q psy15995        599 AHNKEWG---FHSAKVNCVAWSPDSALVASGSLD----TTIIIWSLASPAKHIIIKNA-HPQS-QITRLQWLDNDLLVSV  669 (683)
Q Consensus       599 ~~~~~~~---~h~~~v~~~~~s~d~~~l~~~~~d----~~v~iw~~~~~~~~~~~~~~-~~~~-~v~~l~~~~~~~l~s~  669 (683)
                      .......   .....-....  -++++++.++.+    ..+.+||+.+.+........ .+.. ...+.+..++++++.+
T Consensus       307 ~~~~~~~~~~~~R~~~~~~~--~~gkiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~G  384 (470)
T PLN02193        307 FHCSTPGDSFSIRGGAGLEV--VQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFG  384 (470)
T ss_pred             EeCCCCCCCCCCCCCcEEEE--ECCcEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEECCEEEEEC
Confidence            3221100   0011111122  267777777765    45899999887654332110 0111 1223333377788888


Q ss_pred             eCC
Q psy15995        670 GQD  672 (683)
Q Consensus       670 ~~d  672 (683)
                      |.+
T Consensus       385 G~~  387 (470)
T PLN02193        385 GEI  387 (470)
T ss_pred             Ccc
Confidence            853

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=89.16  E-value=1.3  Score=26.39  Aligned_cols=40  Identities=15%  Similarity=0.126  Sum_probs=0.0

Q ss_pred             CCCCeEEEe--cCCeEEEEeCCCCcccccccCcccceEEEEEC
Q psy15995         54 PKGKNFLYT--NGNSVIIRNIENPAISDIYTEHSCAVNVAKYS   94 (683)
Q Consensus        54 ~~~~~l~~~--~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s   94 (683)
                      ||+++|..+  .++.|.++|..+++.+..+.- ...-..++|+
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~~~   42 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVAVS   42 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEEeC

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=88.74  E-value=12  Score=37.47  Aligned_cols=63  Identities=14%  Similarity=0.224  Sum_probs=31.5

Q ss_pred             CeEEEeeCCCCCeEEEecCCeEEEEeCC-------CCcccccc-cCcccceEEEEECCCCcEEEEecCCCCEEEEeCCC
Q psy15995         46 QPIVLGGDPKGKNFLYTNGNSVIIRNIE-------NPAISDIY-TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVN  116 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~~~i~v~~~~-------~~~~~~~~-~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~  116 (683)
                      ....+.+.|.-.+.....++.++||+..       ++.....+ .++...+.++        ++.....|.|+.|+--+
T Consensus        27 ~~~~~gi~~e~g~Aw~~~d~~l~vW~Y~~~~~s~~~~~~~~~~~~~~~~~i~~v--------~lv~p~~G~v~f~~~I~   97 (422)
T PF08801_consen   27 SPCSMGIFPEIGRAWIVVDNRLYVWNYSSTQSSPNDGSDFPLFDDGSSSSIPGV--------GLVKPKTGRVVFWESIS   97 (422)
T ss_dssp             TS-EEEEE-TTSEEEEEETTEEEEEE--SS--GG--EEEEE-----------SE--------EEEE-TT-EEEEES-TT
T ss_pred             cceEEEEEcccCEEEEEECCEEEEEeccCCCCCcCcccccceecCCCCCCCceE--------EEEEcCCCCEEecccch
Confidence            3455667788888888899999999984       33333333 4444444443        33456678888887543

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>KOG4659|consensus

Probab=88.69  E-value=45  Score=37.28  Aligned_cols=68  Identities=18%  Similarity=0.183  Sum_probs=48.3

Q ss_pred             eccCCCCCCceeecCCCCCCceeeecccceeecCCCcccCCCeEEEeeCCCCCeEEEecCCeEEEEeCCC
Q psy15995          5 TLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIEN   74 (683)
Q Consensus         5 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~   74 (683)
                      ||...|||+.++  |+-.-..-++..+....+..+..+...+-..+|.||-...|+......=.||-+.+
T Consensus       369 ala~a~DGSl~V--GDfNyIRRI~~dg~v~tIl~L~~t~~sh~Yy~AvsPvdgtlyvSdp~s~qv~rv~s  436 (1899)
T KOG4659|consen  369 ALAYAPDGSLIV--GDFNYIRRISQDGQVSTILTLGLTDTSHSYYIAVSPVDGTLYVSDPLSKQVWRVSS  436 (1899)
T ss_pred             eEEEcCCCcEEE--ccchheeeecCCCceEEEEEecCCCccceeEEEecCcCceEEecCCCcceEEEecc
Confidence            788899999988  55555555555555555555655666678889999988888887666666665543

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=88.60  E-value=26  Score=34.36  Aligned_cols=41  Identities=7%  Similarity=-0.172  Sum_probs=20.0

Q ss_pred             cEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEec
Q psy15995        339 TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSL  379 (683)
Q Consensus       339 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  379 (683)
                      .+.+||..+.+....-...............+++..+.|+.
T Consensus       190 ~v~~YD~~t~~W~~~~~~p~~~~~~~a~v~~~~~iYv~GG~  230 (376)
T PRK14131        190 EVLSYDPSTNQWKNAGESPFLGTAGSAVVIKGNKLWLINGE  230 (376)
T ss_pred             eEEEEECCCCeeeECCcCCCCCCCcceEEEECCEEEEEeee
Confidence            47888988776543221111111122223336666666664

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=88.20  E-value=27  Score=34.18  Aligned_cols=40  Identities=13%  Similarity=0.035  Sum_probs=20.0

Q ss_pred             EEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecC
Q psy15995        588 VVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLD  629 (683)
Q Consensus       588 i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d  629 (683)
                      +.+||..+.+........  ...-...+..-++++++.|+..
T Consensus       314 ~e~yd~~~~~W~~~~~lp--~~r~~~~av~~~~~iyv~GG~~  353 (376)
T PRK14131        314 DEIYALVNGKWQKVGELP--QGLAYGVSVSWNNGVLLIGGET  353 (376)
T ss_pred             hheEEecCCcccccCcCC--CCccceEEEEeCCEEEEEcCCC
Confidence            457888876654322221  1111112333467777777754

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=88.06  E-value=35  Score=35.18  Aligned_cols=208  Identities=14%  Similarity=0.150  Sum_probs=93.1

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEecccc---ceeeeccc-c--ccCCCeeEEEEcC-----CCCeEEEEe--cCCc
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNK---EHILKNEF-H--PIGGPIKDIAWSP-----DNQRMVVVG--EGRE  208 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~-~--~~~~~i~~~~~s~-----~~~~l~~~~--~~~~  208 (683)
                      .....++..|.|+.++.+..++.+.++-++..   +....... .  ...+.|.+++|-.     +...+++.-  ....
T Consensus        44 ~~G~~l~vDP~~R~i~v~a~e~~~~v~~l~~~~~~~~~~~~~~~~pi~s~~~i~~~~FL~~~~~~~~p~la~L~~~~~~~  123 (504)
T PF10433_consen   44 QPGQYLAVDPSGRCIAVSAYEGNFLVYPLNRSLDSDIAFSPHINSPIKSEGNILDMCFLHPSVGYDNPTLAILYVDSQRR  123 (504)
T ss_dssp             TT--EEEE-TTSSEEEEEEBTTEEEEEE-SS----T-TT---EEEE--S-SEEEEEEEES---S-SS-EEEEEEEETT-E
T ss_pred             cCCcEEEECCcCCEEEEEecCCeEEEEEecccccccccccccccccccCCceEEEEEEEecccCCCCceEEEEEEEeccc
Confidence            34567899999999999999999999998871   00000110 0  1257788999985     233444433  2333


Q ss_pred             eEEEEEEccCCCceee------ee-----cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcC--CCC-ceeeecc----c
Q psy15995        209 RFGHVFMSETGTSVGE------IS-----GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG--PPF-KFKMTKQ----E  270 (683)
Q Consensus       209 ~~~~~~~~~~~~~~~~------~~-----~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~--~~~-~~~~~~~----~  270 (683)
                      .....+.|+....+..      ..     .+..+ ..+.-.|.....++.++. +.+..-+.  ..+ .......    .
T Consensus       124 ~~~~~y~w~~~~~l~~~~~~~~~~~~l~~~~~~p-~~LIPlp~~~ggllV~~~-~~i~y~~~~~~~~~~~~~~~~~~~~~  201 (504)
T PF10433_consen  124 THLVTYEWSLDDGLNHVISKSTLPIRLPNEDELP-SFLIPLPNPPGGLLVGGE-NIIIYKNHLIGSGDYSFLSIPSPPSS  201 (504)
T ss_dssp             EEEEEEE--------EETTTTEEEE--EEEE-TT-EEEEEE-TTT-SEEEEES-SEEEEEE------TTEEEEE--H-HH
T ss_pred             ceeEEEeeecccccceeeeeccccccccccCCCc-cEEEEcCCCCcEEEEECC-EEEEEecccccccccccccccCCccC
Confidence            4455666554332211      11     11122 222222332212444443 22322221  111 1111111    1


Q ss_pred             cccCeEEEE-------ECCCCCEEEEEcCCCcEEEEeCCCCee---EEeccCCcc-ccCeEEEEEccCC-CEEEEEECCC
Q psy15995        271 HSRFVQAVR-------YSPSGSHFASAGFDGKVFLYDGASADL---VSELGNPAH-KGGVYAVAWKPDG-TQLLTASGDK  338 (683)
Q Consensus       271 ~~~~v~~~~-------~~~~~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~~-~~~i~~~~~~~~~-~~l~~~~~dg  338 (683)
                      ...-+.+.+       ...++..++.+..+|.+....+.....   +..+.   . .....++++..++ .+++.|+.-|
T Consensus       202 ~~~~~~~~~~p~~~~~~~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g---~~~~~~s~l~~l~~g~d~lf~gs~~g  278 (504)
T PF10433_consen  202 SSSLWTSWARPERNISYDKDGDRILLQDEDGDLYLLTLDNDGGSISITYLG---TLCSIASSLTYLKNGGDYLFVGSEFG  278 (504)
T ss_dssp             HTS-EEEEEE------SSTTSSEEEEEETTSEEEEEEEEEEEEEEEEEEEE---E--S-ESEEEEESTT--EEEEEESSS
T ss_pred             CCceEEEEEeccccceecCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEcC---CcCChhheEEEEcCCCEEEEEEEecC
Confidence            122333333       345677888899999999887665442   22221   2 3345566666544 3777777755


Q ss_pred             c--EEEEECCCCceeeEE
Q psy15995        339 T--CKLWDIETKSVVSEF  354 (683)
Q Consensus       339 ~--i~iwd~~~~~~~~~~  354 (683)
                      .  +..|....-+.+..+
T Consensus       279 ds~l~~~~~~~l~~~~~~  296 (504)
T PF10433_consen  279 DSQLLQISLSNLEVLDSL  296 (504)
T ss_dssp             -EEEEEEESESEEEEEEE
T ss_pred             CcEEEEEeCCCcEEEEec
Confidence            4  444443333334443

...

>KOG4460|consensus

Probab=87.85  E-value=11  Score=37.05  Aligned_cols=26  Identities=19%  Similarity=0.170  Sum_probs=20.8

Q ss_pred             cEEEEEEeCCCCEEEEEeCCCcEEEE
Q psy15995        404 PITALALSPDRGTVFTGSHDGFITRW  429 (683)
Q Consensus       404 ~v~~~~~~~~~~~l~~~~~dg~i~~w  429 (683)
                      .|..+..++.|..++-.+.+|.+..+
T Consensus       105 eV~~vl~s~~GS~VaL~G~~Gi~vMe  130 (741)
T KOG4460|consen  105 EVYQVLLSPTGSHVALIGIKGLMVME  130 (741)
T ss_pred             EEEEEEecCCCceEEEecCCeeEEEE
Confidence            47778889999999998888865544

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=87.84  E-value=23  Score=32.92  Aligned_cols=192  Identities=14%  Similarity=0.179  Sum_probs=99.6

Q ss_pred             ceEEEEECCCCcEEEE--ecC----------CCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccc-
Q psy15995         87 AVNVAKYSPSGFYIAS--GDI----------SGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIG-  153 (683)
Q Consensus        87 ~v~~~~~s~d~~~las--~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-  153 (683)
                      .|..+...+++++-+.  |..          .-+|.+||+.+++.++++.+.+.-..        .......+.+.... 
T Consensus         2 sV~~v~iD~~~rLWVlD~G~~~~~~~~~~~~~pKLv~~Dl~t~~li~~~~~p~~~~~--------~~s~lndl~VD~~~~   73 (287)
T PF03022_consen    2 SVQRVQIDECGRLWVLDSGRPNGLQPPKQVCPPKLVAFDLKTNQLIRRYPFPPDIAP--------PDSFLNDLVVDVRDG   73 (287)
T ss_dssp             -EEEEEE-TTSEEEEEE-CCHSSSSTTGHTS--EEEEEETTTTCEEEEEE--CCCS---------TCGGEEEEEEECTTT
T ss_pred             cccEEEEcCCCCEEEEeCCCcCCCCCCCCCCCcEEEEEECCCCcEEEEEECChHHcc--------cccccceEEEEccCC
Confidence            3566777777755442  221          13699999999999888887753221        12445566665521 


Q ss_pred             ----eEEE-eecCCccEEEEeccccceeeecc--cc---------------ccCCCeeEEEEcC---CCCeEEEEecCCc
Q psy15995        154 ----FYIA-SGDISGKVRIWDTVNKEHILKNE--FH---------------PIGGPIKDIAWSP---DNQRMVVVGEGRE  208 (683)
Q Consensus       154 ----~~l~-~~~~d~~i~iwd~~~~~~~~~~~--~~---------------~~~~~i~~~~~s~---~~~~l~~~~~~~~  208 (683)
                          .++. +=...+-|.|+|+.+++.-....  +.               .....+..++.+|   +++.|....-...
T Consensus        74 ~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~  153 (287)
T PF03022_consen   74 NCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSR  153 (287)
T ss_dssp             TS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-S
T ss_pred             CCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccccceeccCceEecCCCccccccCCCCCCccEEEEEeCCCC
Confidence                2332 33334579999998875321111  10               0112467777766   6777776654432


Q ss_pred             eEEEEEEccC-----CC---------ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC----c--eeeec
Q psy15995        209 RFGHVFMSET-----GT---------SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF----K--FKMTK  268 (683)
Q Consensus       209 ~~~~~~~~~~-----~~---------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~----~--~~~~~  268 (683)
                         .++...+     ..         .+..+-........++++++|. ++++--..+.|..|+....    .  .+..-
T Consensus       154 ---~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~~D~~G~-ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d  229 (287)
T PF03022_consen  154 ---KLYRVPTSVLRDPSLSDAQALASQVQDLGDKGSQSDGMAIDPNGN-LYFTDVEQNAIGCWDPDGPYTPENFEILAQD  229 (287)
T ss_dssp             ---EEEEEEHHHHCSTT--HHH-HHHT-EEEEE---SECEEEEETTTE-EEEEECCCTEEEEEETTTSB-GCCEEEEEE-
T ss_pred             ---cEEEEEHHHhhCccccccccccccceeccccCCCCceEEECCCCc-EEEecCCCCeEEEEeCCCCcCccchheeEEc
Confidence               2333221     11         1112212224567788899887 4777788899999997651    1  12211


Q ss_pred             cccccCeEEEEECC--CCCEEEEE
Q psy15995        269 QEHSRFVQAVRYSP--SGSHFASA  290 (683)
Q Consensus       269 ~~~~~~v~~~~~~~--~~~~l~~~  290 (683)
                      ...-..+..+.+.+  +|.+.+..
T Consensus       230 ~~~l~~pd~~~i~~~~~g~L~v~s  253 (287)
T PF03022_consen  230 PRTLQWPDGLKIDPEGDGYLWVLS  253 (287)
T ss_dssp             CC-GSSEEEEEE-T--TS-EEEEE
T ss_pred             CceeeccceeeeccccCceEEEEE
Confidence            11235678888888  66644444

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	683
1nr0_A	611	Two Seven-Bladed Beta-Propeller Domains Revealed By		1e-141
1pi6_A	615	Yeast Actin Interacting Protein 1 (Aip1), Orthorhom		2e-67
1pgu_A	615	Yeast Actin Interacting Protein 1 (aip1), Se-met Pr		3e-66
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		3e-20
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		2e-17
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		6e-09
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		9e-14
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		2e-08
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		2e-13
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		5e-13
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		2e-05
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		2e-13
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		6e-13
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		2e-05
2g99_A	308	Structural Basis For The Specific Recognition Of Me		2e-13
2g99_A	308	Structural Basis For The Specific Recognition Of Me		5e-13
2g99_A	308	Structural Basis For The Specific Recognition Of Me		3e-05
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		2e-13
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		6e-13
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		3e-05
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		2e-13
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		6e-13
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		2e-05
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		2e-13
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		6e-13
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		2e-05
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		2e-13
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		5e-13
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		3e-05
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		2e-13
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		7e-13
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		2e-05
2h9l_A	329	Wdr5delta23 Length = 329		3e-13
2h9l_A	329	Wdr5delta23 Length = 329		7e-13
2h9l_A	329	Wdr5delta23 Length = 329		2e-05
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		3e-13
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		8e-13
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		2e-05
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		3e-13
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		4e-13
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		1e-05
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		3e-13
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		4e-13
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		1e-05
2gnq_A	336	Structure Of Wdr5 Length = 336		4e-13
2gnq_A	336	Structure Of Wdr5 Length = 336		7e-13
2gnq_A	336	Structure Of Wdr5 Length = 336		3e-05
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		4e-13
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		6e-13
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		3e-05
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		6e-13
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		9e-13
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		7e-06
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		6e-13
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		4e-10
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		6e-13
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		8e-13
3iz6_a	380	Localization Of The Small Subunit Ribosomal Protein		1e-12
3iz6_a	380	Localization Of The Small Subunit Ribosomal Protein		2e-04
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		1e-12
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		4e-12
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		3e-05
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		6e-12
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		9e-12
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		3e-05
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		2e-11
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		3e-11
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		4e-05
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		9e-11
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		8e-08
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		9e-05
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		9e-11
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		8e-08
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		7e-05
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		2e-10
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		8e-08
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		1e-04
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		2e-10
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		2e-04
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		2e-10
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		2e-10
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		2e-10
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		3e-10
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		3e-10
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		3e-10
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		1e-06
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		4e-10
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		4e-10
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		1e-06
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		4e-09
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		3e-07
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		9e-09
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		9e-09
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		1e-08
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		2e-08
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		3e-08
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		4e-04
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		3e-08
2aq5_A	402	Crystal Structure Of Murine Coronin-1 Length = 402		7e-08
2b4e_A	402	Crystal Structure Of Murine Coronin-1: Monoclinic F		7e-08
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		1e-07
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		1e-07
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		3e-06
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		6e-04
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		2e-07
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		9e-04
4aez_A	401	Crystal Structure Of Mitotic Checkpoint Complex Len		2e-06
4aez_A	401	Crystal Structure Of Mitotic Checkpoint Complex Len		5e-06
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		2e-06
3bg0_A	316	Architecture Of A Coat For The Nuclear Pore Membran		2e-05
1r5m_A	425	Crystal Structure Of The C-Terminal Wd40 Domain Of		4e-05
1gxr_A	337	Wd40 Region Of Human Groucho/tle1 Length = 337		7e-05
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		9e-05
4a11_B	408	Structure Of The Hsddb1-Hscsa Complex Length = 408		1e-04
2xyi_A	430	Crystal Structure Of Nurf55 In Complex With A H4 Pe		1e-04
2xyi_A	430	Crystal Structure Of Nurf55 In Complex With A H4 Pe		1e-04
4g56_B	357	Crystal Structure Of Full Length Prmt5/mep50 Comple		1e-04
2yba_A	422	Crystal Structure Of Nurf55 In Complex With Histone		1e-04
3c99_A	432	Structural Basis Of Histone H4 Recognition By P55 L		1e-04
3c99_A	432	Structural Basis Of Histone H4 Recognition By P55 L		1e-04
2pm9_A	416	Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O		2e-04
3gfc_A	425	Crystal Structure Of Histone-Binding Protein Rbbp4		4e-04
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		9e-04

>pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611

Iteration: 1
 Score =  499 bits (1286), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 275/662 (41%), Positives = 381/662 (57%), Gaps = 72/662 (10%)
Query: 35  IFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYS 94
           +F +LPRT RG  +VLG  P G    Y NG SV    + +   ++IYTEHS    VAK S
Sbjct: 9   LFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTS 68
Query: 95  PSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF 154
           PSG+Y ASGD+ G VRIWDT    HILK       GP+KDI                   
Sbjct: 69  PSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDIS------------------ 110
Query: 155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF 214
                        WD+                         +++R+  VGEGRERFGHVF
Sbjct: 111 -------------WDS-------------------------ESKRIAAVGEGRERFGHVF 132
Query: 215 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF 274
           + +TGTS G ++GQ++ +NS DFKPSRPFRII+GS+DNT+A+FEGPPFKFK T  EH++F
Sbjct: 133 LFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF 192
Query: 275 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLV-----SELGNPAHKGGVYAVAWKPDGT 329
           V +VRY+P GS FAS G DG + LY+G             L N AH G V+ + W PDGT
Sbjct: 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT 252
Query: 330 QLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVN 389
           ++ +AS DKT K+W++ T  V     +G ++EDQQ+  +W    L+++S +GFI++++  
Sbjct: 253 KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE 312
Query: 390 NPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN 449
             S   +V  GHNK ITAL+ S D  T+F+   +G I  W+  TG ++RV    H   I 
Sbjct: 313 LGSID-QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMIT 371
Query: 450 GMKATGE-LLYTCGIDDTIKQVDLSSNAYSGPEV---KLGSQPRGLDI--DENTLVTVTV 503
           G+K T +  L+T   DD +K V    +     +    KL SQP GL +  D +  V    
Sbjct: 372 GIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACY 431
Query: 504 KQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDH 563
           K I+I  +G K++ +PI Y  S ++L ++   VAVGG DSKVH+Y+L+  S+S    + H
Sbjct: 432 KHIAIYSHG-KLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH 490
Query: 564 LGPVTDCSFSPSNEYLVASDAHRKVVLYRVP-DFELAHNKEWGFHSAKVNCVAWSPDSAL 622
              +T  +FS +  +LVA+D  RKV+ Y V  +FELAH   W FH+AKV CV+WSPD+  
Sbjct: 491 PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVR 550
Query: 623 VASGSLDTTIIIWSLASPAKH-IIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIA 681
           +A+GSLD ++I+W++  P+ H IIIK AH  S +  + WL+   +VS GQD N K W + 
Sbjct: 551 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV- 609
Query: 682 PF 683
           PF
Sbjct: 610 PF 611

>pdb|1PI6|A Chain A, Yeast Actin Interacting Protein 1 (Aip1), Orthorhombic Crystal Form Length = 615

Iteration: 1
 Score =  253 bits (647), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 177/557 (31%), Positives = 300/557 (53%), Gaps = 55/557 (9%)
Query: 155 YIASGDISGKVRIWD-TVNKEHI-----LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE 208
           Y+ SGD SGKV +W  T +KE       +K+EF  + GPI DI+W  + +R+ VVGEGR+
Sbjct: 80  YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD 139
Query: 209 RFGHVFMS-ETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT 267
            FG VF+S ++G S+GE+SG S+ IN+C  K SRP R +T  +D ++  ++GPPFKF  +
Sbjct: 140 NFG-VFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSAS 198
Query: 268 KQEHSR---FVQAVRYSP-SGSHFASAGFDGKVFLYDGASADLVSELGNPAH--KGGVYA 321
            + H +   FV+ V +SP SG    + G D K+  +DG S + +  + +     +GG++A
Sbjct: 199 DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFA 258
Query: 322 VAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMG-NQVEDQQVSCLWQGD-YLLTVSL 379
           ++W  D  +  T   D T ++WD+ T   V ++ +   Q+ +QQV  +  G+  ++++SL
Sbjct: 259 LSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL 317
Query: 380 SGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRV 439
            G +++ ++ +    ++ I GHNK ITAL ++P    + +GS+DG I  W++ +   D  
Sbjct: 318 DGTLNFYELGHDEV-LKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQD-- 370
Query: 440 QGAGHGNQINGMKATGELLYTC-GIDDTIKQVDLSSNAYSGPEVKLGSQPR--GLDIDEN 496
               H N I  +  +    Y+    DDT+K   ++ + +       GSQP+    + D  
Sbjct: 371 ----HSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEF-------GSQPKVASANNDGF 419
Query: 497 TLVTVTVKQISIVEN--GAKVSSLPIDYEPSSISLDHEHGLVAVGGAD-SKVHIYELNNK 553
           T V      + I+++  G  + S+ ++   S++SL   +  VAVG  + + + +++L++ 
Sbjct: 420 TAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNY--VAVGLEEGNTIQVFKLSDL 477
Query: 554 SLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNC 613
            +S   +       +  S SPS  Y+ A D   K++LY +   E+  ++ W F ++K+N 
Sbjct: 478 EVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSR-WAFRTSKINA 536
Query: 614 VAWSP----------DSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDN 663
           ++W P          +  LVA+GSLDT I I+S+  P K I   NAH +  +  L W   
Sbjct: 537 ISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAH-KDGVNNLLWETP 595
Query: 664 DLLVSVGQDCNTKIWEI 680
             LVS G D   K W +
Sbjct: 596 STLVSSGADACIKRWNV 612

>pdb|1PGU|A Chain A, Yeast Actin Interacting Protein 1 (aip1), Se-met Protein, Monoclinic Crystal Form Length = 615

Iteration: 1
 Score =  249 bits (637), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 174/556 (31%), Positives = 295/556 (53%), Gaps = 53/556 (9%)
Query: 155 YIASGDISGKVRIWD-TVNKEHI-----LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE 208
           Y+ SGD SGKV +W  T +KE       +K+EF  + GPI DI+W  + +R+ VVGEGR+
Sbjct: 80  YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD 139
Query: 209 RFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK 268
            FG     ++G S+GE+SG S+ IN+C  K SRP R  T  +D ++  ++GPPFKF  + 
Sbjct: 140 NFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPXRSXTVGDDGSVVFYQGPPFKFSASD 199
Query: 269 QEHSR---FVQAVRYSP-SGSHFASAGFDGKVFLYDGASADLVSELGNPAH--KGGVYAV 322
           + H +   FV+ V +SP SG    + G D K+  +DG S + +  + +     +GG++A+
Sbjct: 200 RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFAL 259
Query: 323 AWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMG-NQVEDQQVSCLWQGD-YLLTVSLS 380
           +W  D  +  T   D T ++WD+ T   V ++ +   Q+ +QQV  +  G+  ++++SL 
Sbjct: 260 SWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 318
Query: 381 GFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQ 440
           G +++ ++ +    ++ I GHNK ITAL ++P    + +GS+DG I  W++ +   D   
Sbjct: 319 GTLNFYELGHDEV-LKTISGHNKGITALTVNP----LISGSYDGRIXEWSSSSXHQD--- 370
Query: 441 GAGHGNQINGMKATGELLYTC-GIDDTIKQVDLSSNAYSGPEVKLGSQPR--GLDIDENT 497
              H N I  +  +    Y+    DDT+K   ++ + +       GSQP+    + D  T
Sbjct: 371 ---HSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEF-------GSQPKVASANNDGFT 420
Query: 498 LVTVTVKQISIVEN--GAKVSSLPIDYEPSSISLDHEHGLVAVGGAD-SKVHIYELNNKS 554
            V      + I+++  G  + S+ ++   S++SL   +  VAVG  + + + +++L++  
Sbjct: 421 AVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNY--VAVGLEEGNTIQVFKLSDLE 478
Query: 555 LSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCV 614
           +S   +       +  S SPS  Y+ A D   K++LY +   E+  ++ W F ++K+N +
Sbjct: 479 VSFDLKTPLRAKPSYISISPSETYIAAGDVXGKILLYDLQSREVKTSR-WAFRTSKINAI 537
Query: 615 AWSP----------DSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDND 664
           +W P          +  LVA+GSLDT I I+S+  P K I   NAH +  +  L W    
Sbjct: 538 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPXKIIKALNAH-KDGVNNLLWETPS 596
Query: 665 LLVSVGQDCNTKIWEI 680
            LVS G D   K W +
Sbjct: 597 TLVSSGADACIKRWNV 612

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 130/593 (21%), Positives = 240/593 (40%), Gaps = 53/593 (8%)
Query: 54  PKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWD 113
           P G+     + +  +     N  +    T HS +V    +SP G  IAS      V++W+
Sbjct: 26  PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 85
Query: 114 TVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNK 173
             N + +     H               +S+R +     G  IAS      V++W   N+
Sbjct: 86  R-NGQLLQTLTGHS--------------SSVRGVAFSPDGQTIASASDDKTVKLW---NR 127
Query: 174 EHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPIN 233
              L          +  +A+SPD Q +    + +        +  G  +  ++G S  + 
Sbjct: 128 NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV---KLWNRNGQLLQTLTGHSSSVW 184
Query: 234 SCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD 293
              F P     I + S+D T+ ++     +   T   HS  V+ V +SP G   ASA  D
Sbjct: 185 GVAFSPDGQ-TIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 242
Query: 294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSE 353
             V L++  +  L+  L    H   V  VA++PDG  + +AS DKT KLW+   + +  +
Sbjct: 243 KTVKLWN-RNGQLLQTL--TGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLL--Q 297
Query: 354 FIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPD 413
            + G+      V+    G  + + S    +   + N     ++ + GH+  +  +A SPD
Sbjct: 298 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ--HLQTLTGHSSSVWGVAFSPD 355
Query: 414 RGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIK--- 468
             T+ + S D  +  WN + G+  +    GH + + G+  +  G+ + +   D T+K   
Sbjct: 356 GQTIASASDDKTVKLWN-RNGQLLQTL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 413
Query: 469 ---QVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTV-KQISIVENGAKVSSLPIDYEP 524
              Q+  +   +S     +   P     D+ T+ + +  K + +     ++      +  
Sbjct: 414 RNGQLLQTLTGHSSSVWGVAFSP-----DDQTIASASDDKTVKLWNRNGQLLQTLTGHSS 468
Query: 525 S--SISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVAS 582
           S   ++   +   +A    D  V ++  N + L  +    H   V   +FSP  + + ++
Sbjct: 469 SVRGVAFSPDGQTIASASDDKTVKLWNRNGQLL--QTLTGHSSSVRGVAFSPDGQTIASA 526
Query: 583 DAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIW 635
              + V L+      L   +    HS+ V  VA+SPD   +AS S D T+ +W
Sbjct: 527 SDDKTVKLWNRNGQLL---QTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLW 576

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 104/460 (22%), Positives = 188/460 (40%), Gaps = 58/460 (12%)
Query: 178 KNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDF 237
           +N        ++ +A+SPD Q +    + +        +  G  +  ++G S  +    F
Sbjct: 9   RNRLEAHSSSVRGVAFSPDGQTIASASDDKTV---KLWNRNGQLLQTLTGHSSSVWGVAF 65
Query: 238 KPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVF 297
            P     I + S+D T+ ++     +   T   HS  V+ V +SP G   ASA  D  V 
Sbjct: 66  SPDGQ-TIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 123
Query: 298 LYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMG 357
           L++  +  L+  L    H   V+ VA+ PDG  + +AS DKT KLW+   + +  + + G
Sbjct: 124 LWN-RNGQLLQTL--TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLL--QTLTG 178
Query: 358 NQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTV 417
           +      V+    G  + + S    +   + N     ++ + GH+  +  +A SPD  T+
Sbjct: 179 HSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ--LLQTLTGHSSSVRGVAFSPDGQTI 236
Query: 418 FTGSHDGFITRWNAKTGENDRVQGAGHGNQINGM--KATGELLYTCGIDDTIKQVDLSSN 475
            + S D  +  WN + G+  +    GH + +NG+  +  G+ + +   D T+K       
Sbjct: 237 ASASDDKTVKLWN-RNGQLLQTL-TGHSSSVNGVAFRPDGQTIASASDDKTVKL------ 288
Query: 476 AYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGL 535
                           + +   L T+T         G   S   + + P       +   
Sbjct: 289 ---------------WNRNGQLLQTLT---------GHSSSVWGVAFSP-------DGQT 317
Query: 536 VAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPD 595
           +A    D  V ++  N + L  +    H   V   +FSP  + + ++   + V L+    
Sbjct: 318 IASASDDKTVKLWNRNGQHL--QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG 375
Query: 596 FELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIW 635
             L   +    HS+ V  VA+SPD   +AS S D T+ +W
Sbjct: 376 QLL---QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW 412

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 151/379 (39%), Gaps = 33/379 (8%)
Query: 314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDY 373
           AH   V  VA+ PDG  + +AS DKT KLW+   +  + + + G+      V+    G  
Sbjct: 14  AHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ--LLQTLTGHSSSVWGVAFSPDGQT 71
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           + + S    +   + N     ++ + GH+  +  +A SPD  T+ + S D  +  WN + 
Sbjct: 72  IASASDDKTVKLWNRNGQ--LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RN 128
Query: 434 GENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIK------QVDLSSNAYSGPEVKLG 485
           G+  +    GH + + G+  +  G+ + +   D T+K      Q+  +   +S     + 
Sbjct: 129 GQLLQTL-TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVA 187
Query: 486 SQPRGLDI-----DENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGG 540
             P G  I     D+   +     Q+     G   S   + + P       +   +A   
Sbjct: 188 FSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSP-------DGQTIASAS 240
Query: 541 ADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAH 600
            D  V ++  N + L  +    H   V   +F P  + + ++   + V L+      L  
Sbjct: 241 DDKTVKLWNRNGQLL--QTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLL-- 296
Query: 601 NKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQW 660
            +    HS+ V  VA+SPD   +AS S D T+ +W+     +H+     H  S       
Sbjct: 297 -QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN--RNGQHLQTLTGHSSSVWGVAFS 353
Query: 661 LDNDLLVSVGQDCNTKIWE 679
            D   + S   D   K+W 
Sbjct: 354 PDGQTIASASDDKTVKLWN 372

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 34  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 89
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 90  IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 148
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 149 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 204
Query: 330 QLLTASGDKTCKLWD 344
            +L A+ D T KLWD
Sbjct: 205 YILAATLDNTLKLWD 219

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNPAHK 316
           P +  K T   H++ V +V++SP+G   AS+  D  + +   YDG     +S      HK
Sbjct: 10  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 64
Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDY 373
            G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q + 
Sbjct: 65  LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQSNL 120
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+  +
Sbjct: 121 IVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 179
Query: 434 GENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
           G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 180 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 221

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 21  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 78
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 79  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 128
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 129 SVRIWDV 135

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 35  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 90
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 91  IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 149
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 150 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 205
Query: 330 QLLTASGDKTCKLWD 344
            +L A+ D T KLWD
Sbjct: 206 YILAATLDNTLKLWD 220

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNPAHK 316
           P +  K T   H++ V +V++SP+G   AS+  D  + +   YDG     +S      HK
Sbjct: 11  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 65
Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDY 373
            G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q + 
Sbjct: 66  LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQSNL 121
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+  +
Sbjct: 122 IVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 180
Query: 434 GENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
           G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 181 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 222

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 22  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 79
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 80  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 129
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 130 SVRIWDV 136

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 31  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 86
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 87  IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 145
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 146 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 201
Query: 330 QLLTASGDKTCKLWD 344
            +L A+ D T KLWD
Sbjct: 202 YILAATLDNTLKLWD 216

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNPAHK 316
           P +  K T   H++ V +V++SP+G   AS+  D  + +   YDG     +S      HK
Sbjct: 7   PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 61
Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDY 373
            G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q + 
Sbjct: 62  LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQSNL 117
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+  +
Sbjct: 118 IVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 176
Query: 434 GENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
           G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 177 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 218

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 18  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 75
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 76  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 125
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 126 SVRIWDV 132

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 35  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 90
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 91  IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 149
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 150 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 205
Query: 330 QLLTASGDKTCKLWD 344
            +L A+ D T KLWD
Sbjct: 206 YILAATLDNTLKLWD 220

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNPAHK 316
           P +  K T   H++ V +V++SP+G   AS+  D  + +   YDG     +S      HK
Sbjct: 11  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 65
Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDY 373
            G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q + 
Sbjct: 66  LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQSNL 121
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+  +
Sbjct: 122 IVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 180
Query: 434 GENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
           G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 181 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 222

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 22  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 79
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 80  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 129
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 130 SVRIWDV 136

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 36  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 91
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 92  IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 150
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 151 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 206
Query: 330 QLLTASGDKTCKLWD 344
            +L A+ D T KLWD
Sbjct: 207 YILAATLDNTLKLWD 221

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNPAHK 316
           P +  K T   H++ V +V++SP+G   AS+  D  + +   YDG     +S      HK
Sbjct: 12  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 66
Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDY 373
            G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q + 
Sbjct: 67  LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQSNL 122
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+  +
Sbjct: 123 IVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 181
Query: 434 GENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
           G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 182 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 223

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 23  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 80
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 81  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 130
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 131 SVRIWDV 137

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 41  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 96
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 97  IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 155
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 156 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 211
Query: 330 QLLTASGDKTCKLWD 344
            +L A+ D T KLWD
Sbjct: 212 YILAATLDNTLKLWD 226

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNPAHK 316
           P +  K T   H++ V +V++SP+G   AS+  D  + +   YDG     +S      HK
Sbjct: 17  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 71
Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDY 373
            G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q + 
Sbjct: 72  LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQSNL 127
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+  +
Sbjct: 128 IVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 186
Query: 434 GENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
           G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 187 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 228

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 28  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 85
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 86  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 135
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 136 SVRIWDV 142

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 126/287 (43%), Gaps = 19/287 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 41  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 96
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 97  IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 155
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 156 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 211
Query: 330 QLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ---GDYLLTVSLSGFISYL 386
            +L A+ D T KLWD      +  +  G++ E   +   +    G ++++ S    +   
Sbjct: 212 YILAATLDNTLKLWDYSKGKCLKTY-TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 270
Query: 387 DVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS--HDGFITRWNA 431
           ++      ++ ++GH   + + A  P    + + +  +D  I  W +
Sbjct: 271 NLQTKEI-VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 316

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNPAHK 316
           P +  K T   H++ V +V++SP+G   AS+  D  + +   YDG     +S      HK
Sbjct: 17  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 71
Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDY 373
            G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q + 
Sbjct: 72  LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQSNL 127
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+  +
Sbjct: 128 IVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 186
Query: 434 GENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
           G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 187 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 228

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 28  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 85
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 86  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 135
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 136 SVRIWDV 142

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 41  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 96
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 97  IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 155
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 156 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 211
Query: 330 QLLTASGDKTCKLWD 344
            +L A+ D T KLWD
Sbjct: 212 YILAATLDNTLKLWD 226

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNPAHK 316
           P +  K T   H++ V +V++SP+G   AS+  D  + +   YDG     +S      HK
Sbjct: 17  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 71
Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDY 373
            G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q + 
Sbjct: 72  LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQSNL 127
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+  +
Sbjct: 128 IVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 186
Query: 434 GENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
           G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 187 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 228

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 28  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 85
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 86  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 135
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 136 SVRIWDV 142

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 52  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 107
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 108 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 166
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 167 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 222
Query: 330 QLLTASGDKTCKLWD 344
            +L A+ D T KLWD
Sbjct: 223 YILAATLDNTLKLWD 237

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNPAHK 316
           P +  K T   H++ V +V++SP+G   AS+  D  + +   YDG     +S      HK
Sbjct: 28  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 82
Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDY 373
            G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q + 
Sbjct: 83  LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQSNL 138
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+  +
Sbjct: 139 IVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 197
Query: 434 GENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
           G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 198 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 239

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 39  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 96
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 97  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 146
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 147 SVRIWDV 153

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 40  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 95
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 96  IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 154
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 155 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 210
Query: 330 QLLTASGDKTCKLWD 344
            +L A+ D T KLWD
Sbjct: 211 YILAATLDNTLKLWD 225

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNPAHK 316
           P +  K T   H++ V +V++SP+G   AS+  D  + +   YDG     +S      HK
Sbjct: 16  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 70
Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDY 373
            G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q + 
Sbjct: 71  LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQSNL 126
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+  +
Sbjct: 127 IVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 185
Query: 434 GENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
           G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 186 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 227

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 27  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 84
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 85  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 134
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 135 SVRIWDV 141

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 38  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 93
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 94  IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 152
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 153 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 208
Query: 330 QLLTASGDKTCKLWD 344
            +L A+ D T KLWD
Sbjct: 209 YILAATLDNTLKLWD 223

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 257 FEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNP 313
           F  P +  K T   H++ V +V++SP+G   AS+  D  + +   YDG     +S     
Sbjct: 11  FVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----- 65
Query: 314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---Q 370
            HK G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q
Sbjct: 66  GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQ 121
Query: 371 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
            + +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+
Sbjct: 122 SNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 180
Query: 431 AKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
             +G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 181 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 225

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 25  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 82
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 83  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 132
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 133 SVRIWDV 139

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 38  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 93
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 94  IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 152
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 153 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 208
Query: 330 QLLTASGDKTCKLWD 344
            +L A+ D T KLWD
Sbjct: 209 YILAATLDNTLKLWD 223

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 257 FEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNP 313
           F  P +  K T   H++ V +V++SP+G   AS+  D  + +   YDG     +S     
Sbjct: 11  FVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----- 65
Query: 314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---Q 370
            HK G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q
Sbjct: 66  GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQ 121
Query: 371 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
            + +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+
Sbjct: 122 SNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 180
Query: 431 AKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
             +G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 181 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 225

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 25  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 82
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 83  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 132
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 133 SVRIWDV 139

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 128/290 (44%), Gaps = 25/290 (8%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   +  ++   
Sbjct: 59  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASD--DKTLK 114
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 115 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 173
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 174 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 229
Query: 330 QLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ------GDYLLTVSLSGFI 383
            +L A+ D T KLWD      +  +  G++ E     C++       G ++++ S    +
Sbjct: 230 YILAATLDNTLKLWDYSKGKCLKTY-TGHKNEKY---CIFANFSVTGGKWIVSGSEDNLV 285
Query: 384 SYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS--HDGFITRWNA 431
              ++      ++ ++GH   + + A  P    + + +  +D  I  W +
Sbjct: 286 YIWNLQTKEI-VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 334

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNPAHK 316
           P +  K T   H++ V +V++SP+G   AS+  D  + +   YDG     +S      HK
Sbjct: 35  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 89
Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDY 373
            G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q + 
Sbjct: 90  LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQSNL 145
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+  +
Sbjct: 146 IVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 204
Query: 434 GENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
           G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 205 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 246

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 46  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 103
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 104 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 153
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 154 SVRIWDV 160

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 127/290 (43%), Gaps = 25/290 (8%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 57  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 112
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 113 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 171
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 172 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 227
Query: 330 QLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ------GDYLLTVSLSGFI 383
            +L A+ D T KLWD      +  +  G++ E     C++       G ++++ S    +
Sbjct: 228 YILAATLDNTLKLWDYSKGKCLKTY-TGHKNEKY---CIFANFSVTGGKWIVSGSEDNLV 283
Query: 384 SYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS--HDGFITRWNA 431
              ++      ++ ++GH   + + A  P    + + +  +D  I  W +
Sbjct: 284 YIWNLQTKEI-VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNPAHK 316
           P +  K T   H++ V +V++SP+G   AS+  D  + +   YDG     +S      HK
Sbjct: 33  PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 87
Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDY 373
            G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q + 
Sbjct: 88  LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQSNL 143
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+  +
Sbjct: 144 IVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 434 GENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
           G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 44  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 101
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 151
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 152 SVRIWDV 158

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++A+      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 38  GEWLAASSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 93
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++    K   T   HS
Sbjct: 94  IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHS 152
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 153 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 208
Query: 330 QLLTASGDKTCKLWD 344
            +L A+ D T KLWD
Sbjct: 209 YILAATLDNTLKLWD 223

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 257 FEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNP 313
           F  P +  K T   H++ V +V++SP+G   A++  D  + +   YDG     +S     
Sbjct: 11  FVKPNYALKFTLAGHTKAVSSVKFSPNGEWLAASSADKLIKIWGAYDGKFEKTIS----- 65
Query: 314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---Q 370
            HK G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q
Sbjct: 66  GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQ 121
Query: 371 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
            + +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+
Sbjct: 122 SNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 180
Query: 431 AKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
             +G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 181 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 225

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L AS A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 25  HTKAVSSVKFSPNGEWLAASSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 82
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 83  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 132
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 133 SVRIWDV 139

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 35/289 (12%)
Query: 144 IRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV 203
           + ++++ S G +  SG   G++R+WD      +    F      +  +A+S DN+++V  
Sbjct: 433 VEDVVLSSDGQFALSGSWDGELRLWDLA--AGVSTRRFVGHTKDVLSVAFSLDNRQIVSA 490
Query: 204 GEGRERFGHVFMSETGTSVGEISGQSKPINSC-DFKPS--RPFRIITGSEDNTIAVFEGP 260
              R       + E   ++ E     +   SC  F P+  +P  I++ S D T+ V+   
Sbjct: 491 SRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP-TIVSASWDKTVKVWNLS 549
Query: 261 PFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVY 320
             K + T   H+ +V  V  SP GS  AS G DG V L+D A    +  L        ++
Sbjct: 550 NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL---EANSVIH 606
Query: 321 AVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS 380
           A+ + P+    L A+ +   K+WD+E+KS+V +                     L V L 
Sbjct: 607 ALCFSPN-RYWLCAATEHGIKIWDLESKSIVED---------------------LKVDLK 644
Query: 381 GFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRW 429
                 D + P+   R +       T+L  S D  T+F+G  DG I  W
Sbjct: 645 AEAEKADNSGPAATKRKV----IYCTSLNWSADGSTLFSGYTDGVIRVW 689

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 37/229 (16%)
Query: 225 ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE------------HS 272
           ++  + PI++ D        I++ S D +I ++       K+TK +            HS
Sbjct: 385 VTAIATPIDNADI-------IVSASRDKSIILW-------KLTKDDKAYGVAQRRLTGHS 430
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL 332
            FV+ V  S  G    S  +DG++ L+D A+   VS      H   V +VA+  D  Q++
Sbjct: 431 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAG--VSTRRFVGHTKDVLSVAFSLDNRQIV 488
Query: 333 TASGDKTCKLWDI--ETKSVVSEFIMGNQVEDQQVSCLWQGDYLL--TVSLSGFISYLDV 388
           +AS D+T KLW+   E K  +SE   G +     VSC+      L  T+  + +   + V
Sbjct: 489 SASRDRTIKLWNTLGECKYTISE---GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKV 545
Query: 389 NNPS-TPIR-VIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE 435
            N S   +R  + GH   ++ +A+SPD     +G  DG +  W+   G+
Sbjct: 546 WNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 594

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 126/562 (22%), Positives = 204/562 (36%), Gaps = 80/562 (14%)
Query: 183  PIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRP 242
            P    +    +S D QR  +   G ++   VF +ETG  + +I      +  C F     
Sbjct: 613  PHTDAVYHACFSQDGQR--IASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDS 670
Query: 243  FRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSH--FASAGFDGKVFLYD 300
            + I T S D  + +++    K   T  EHS  V    ++   +H   A+   D  + L+D
Sbjct: 671  Y-IATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWD 729
Query: 301  GASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI----ETKSV-VSEFI 355
                +  + +    H   V    + PD   L + S D T +LWD+    E KS+ V  F 
Sbjct: 730  LNQKECRNTMF--GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFF 787
Query: 356  MGNQV--EDQQV---SCLWQGD-YLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALA 409
            + ++   ED +V    C W  D   + V+    +   D++       +  GH+  I    
Sbjct: 788  LSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCD 847
Query: 410  LSPDRGTVFTGSHDGFITRWNAKTGENDRVQGA---GHGNQINGMKAT--GELLYTCGID 464
             SP             +  WN     + R++ A   GH + ++G+  +  G    T   D
Sbjct: 848  FSPYDHLAVIALSQYCVELWNI----DSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDD 903
Query: 465  DTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEP 524
             TI+  +      +   V    Q   +   EN  + + V  I  ++  A  +   IDY P
Sbjct: 904  QTIRVWETKKVCKNSAIVL--KQEIDVVFQENETMVLAVDNIRGLQLIAGKTG-QIDYLP 960
Query: 525  ----SSISLDHEHGLVAVGGADSKVHIYEL-NNKSLSPKAELDHLGPVTDCSFSPSNEYL 579
                S   L      VA G  D  + I EL NN+  S  + + H   V    F+   + L
Sbjct: 961  EAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFS--SGVGHKKAVRHIQFTADGKTL 1018
Query: 580  VASDAHRKVVLYR---------------VPDFELAHNKE---WGF--------------- 606
            ++S     + ++                V DF L  +     W F               
Sbjct: 1019 ISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIE 1078
Query: 607  -----HSAKVNCVAWSPDSALVASGSLDTTIIIWS--LASPAKHIIIKNAHPQSQITRLQ 659
                 H   V   A S D+   +S S D T  IWS  L SP   +   N   +       
Sbjct: 1079 RDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFS-- 1136
Query: 660  WLDNDLLVSVGQDCNTKIWEIA 681
             LD  LL +   +   +IW ++
Sbjct: 1137 -LDGILLATGDDNGEIRIWNVS 1157

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 126/562 (22%), Positives = 202/562 (35%), Gaps = 80/562 (14%)
Query: 183  PIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRP 242
            P    +    +S D QR  +   G ++   VF +ETG  + +I      +  C F     
Sbjct: 620  PHTDAVYHACFSQDGQR--IASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDS 677
Query: 243  FRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVF--LYD 300
            + I T S D  + +++    K   T  EHS  V    ++   +H   A      F  L+D
Sbjct: 678  Y-IATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWD 736
Query: 301  GASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI----ETKSV-VSEFI 355
                +  + +    H   V    + PD   L + S D T +LWD+    E KS+ V  F 
Sbjct: 737  LNQKECRNTMF--GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFF 794
Query: 356  MGNQV--EDQQV---SCLWQGD-YLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALA 409
            + ++   ED +V    C W  D   + V+    +   D++       +  GH+  I    
Sbjct: 795  LSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCD 854
Query: 410  LSPDRGTVFTGSHDGFITRWNAKTGENDRVQGA---GHGNQINGMKAT--GELLYTCGID 464
             SP             +  WN     + R++ A   GH + ++G+  +  G    T   D
Sbjct: 855  FSPYDHLAVIALSQYCVELWNI----DSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDD 910
Query: 465  DTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEP 524
             TI+  +      +   V    Q   +   EN  + + V  I  ++  A  +   IDY P
Sbjct: 911  QTIRVWETKKVCKNSAIVL--KQEIDVVFQENETMVLAVDNIRGLQLIAGKTG-QIDYLP 967
Query: 525  ----SSISLDHEHGLVAVGGADSKVHIYEL-NNKSLSPKAELDHLGPVTDCSFSPSNEYL 579
                S   L      VA G  D  + I EL NN+  S  + + H   V    F+   + L
Sbjct: 968  EAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFS--SGVGHKKAVRHIQFTADGKTL 1025
Query: 580  VASDAHRKVVLYR---------------VPDFELAHNKE---WGF--------------- 606
            ++S     + ++                V DF L  +     W F               
Sbjct: 1026 ISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIE 1085
Query: 607  -----HSAKVNCVAWSPDSALVASGSLDTTIIIWS--LASPAKHIIIKNAHPQSQITRLQ 659
                 H   V   A S D+   +S S D T  IWS  L SP   +   N   +       
Sbjct: 1086 RDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFS-- 1143
Query: 660  WLDNDLLVSVGQDCNTKIWEIA 681
             LD  LL +   +   +IW ++
Sbjct: 1144 -LDGILLATGDDNGEIRIWNVS 1164

>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 16/228 (7%)
Query: 225 ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSG 284
           + G S  + S D+ P + + I++ S+D  + V+     +     + H  +V    ++P+G
Sbjct: 62  LQGHSGKVYSLDWTPEKNW-IVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNG 120
Query: 285 SHFASAGFDGKVFLYDGASADLVSELGN-------PAHKGGVYAVAWKPDG-TQLLTASG 336
              A  G D    +++ +S       GN         HKG   +  + PD  T+L+T SG
Sbjct: 121 QSVACGGLDSACSIFNLSSQ--ADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSG 178
Query: 337 DKTCKLWDIETKSVV----SEFIMGNQVEDQQVSC-LWQGDYLLTVSLSGFISYLDVNNP 391
           D+TC LWD+ T   +    SEF  G+  +   +S      +  ++ S    +   D+   
Sbjct: 179 DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRIT 238
Query: 392 STPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRV 439
           S  +R   GH   I ++   PD     TGS DG    ++ +TG   +V
Sbjct: 239 SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQV 286

>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 77/369 (20%), Positives = 135/369 (36%), Gaps = 76/369 (20%)
Query: 305 DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQ 364
           DLV       H G VY++ W P+   +++AS D    +W+  T           +    +
Sbjct: 55  DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS---------QKTHAIK 105
Query: 365 VSCLWQGDYLL-----TVSLSGFISYLDVNNPST--------PI-RVIKGHNKPITALAL 410
           + C W  +        +V+  G  S   + N S+        P+ RV+ GH    ++   
Sbjct: 106 LHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQY 165
Query: 411 SPDRGT-VFTGSHDGFITRWNAKTGENDRVQG----AGHGN-----QINGMKATGELLYT 460
            PD+ T + TGS D     W+  TG+   + G    +GH        IN + A   +  +
Sbjct: 166 VPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGS 225
Query: 461 CGIDDTIKQVDL-----SSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKV 515
           C  D T++  DL     +   Y G E  + S                   +    +G + 
Sbjct: 226 C--DTTVRLWDLRITSRAVRTYHGHEGDINS-------------------VKFFPDGQRF 264
Query: 516 SSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPS 575
            +   D       +   H L             ++ N+   P    + L  VT  +FS S
Sbjct: 265 GTGSDDGTCRLFDMRTGHQL-------------QVYNR--EPDRNDNELPIVTSVAFSIS 309
Query: 576 NEYLVASDAHRKVVLYRVPDFELAHN--KEWGFHSAKVNCVAWSPDSALVASGSLDTTII 633
              L A  ++    ++     E+  N       H  +++C+  S D + + +GS D  + 
Sbjct: 310 GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLK 369
Query: 634 IWSLASPAK 642
           IW+ +   K
Sbjct: 370 IWAFSGHRK 378

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 38  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 93
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++        T   HS
Sbjct: 94  IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGMCLKTLPAHS 152
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 153 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 208
Query: 330 QLLTASGDKTCKLWD 344
            +L A+ D T KLWD
Sbjct: 209 YILAATLDNTLKLWD 223

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 18/222 (8%)
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNPAHK 316
           P +    T   H++ V +V++SP+G   AS+  D  + +   YDG     +S      HK
Sbjct: 14  PNYALMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 68
Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDY 373
            G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q + 
Sbjct: 69  LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQSNL 124
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+  +
Sbjct: 125 IVSGSFDESVRIWDVKT-GMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 183
Query: 434 GENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLS 473
           G+  +         ++ +K +  G+ +    +D+T+K  D S
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 225

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 25  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 82
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 83  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 132
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 133 SVRIWDV 139

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 12/195 (6%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G ++AS      ++IW   + +       H +G  I D+AWS D+  +V   + +     
Sbjct: 38  GEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNLLVSASDDKTL--K 93
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           ++   +G  +  + G S  +  C+F P     I++GS D ++ +++        T   HS
Sbjct: 94  IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGMCLKTLPAHS 152
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL---GNPAHKGGVYAVAWKPDGT 329
             V AV ++  GS   S+ +DG   ++D AS   +  L    NP     V  V + P+G 
Sbjct: 153 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGK 208
Query: 330 QLLTASGDKTCKLWD 344
            +L A+ D   KLWD
Sbjct: 209 YILAATLDNDLKLWD 223

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL---YDGASADLVSELGNPAHK 316
           P +    T   H++ V +V++SP+G   AS+  D  + +   YDG     +S      HK
Sbjct: 14  PNYALMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHK 68
Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW---QGDY 373
            G+  VAW  D   L++AS DKT K+WD+ +   +       +     V C     Q + 
Sbjct: 69  LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL----KGHSNYVFCCNFNPQSNL 124
Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           +++ S    +   DV      ++ +  H+ P++A+  + D   + + S+DG    W+  +
Sbjct: 125 IVSGSFDESVRIWDVKT-GMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 183
Query: 434 GE 435
           G+
Sbjct: 184 GQ 185

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   V+   FSP+ E+L +S A + + ++   D +    K    H   ++ VAWS DS L
Sbjct: 25  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNL 82
Query: 623 VASGSLDTTIIIWSLAS---------PAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC 673
           + S S D T+ IW ++S          + ++   N +PQS          +L+VS   D 
Sbjct: 83  LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS----------NLIVSGSFDE 132
Query: 674 NTKIWEI 680
           + +IW++
Sbjct: 133 SVRIWDV 139

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 28/269 (10%)
Query: 225 ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSG 284
           +SG   P+    F P     +++ SED TI V++     F+ T + H+  VQ + +  SG
Sbjct: 104 LSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 285 SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWD 344
              AS   D  + L+D    + +  +    H   V +V+  P+G  +++AS DKT K+W+
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMH--GHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 220
Query: 345 IETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKP 404
           ++T   V  F  G++   + V     G  + + S    +    V         ++ H   
Sbjct: 221 VQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE-LREHRHV 278
Query: 405 ITALALSPDRGT--------------------VFTGSHDGFITRWNAKTGENDRVQGAGH 444
           +  ++ +P+                       + +GS D  I  W+  TG    +   GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC-LMTLVGH 337
Query: 445 GNQINGM--KATGELLYTCGIDDTIKQVD 471
            N + G+   + G+ + +C  D T++  D
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWD 366

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 138/316 (43%), Gaps = 25/316 (7%)
Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
           G  I SG     +++W  V  +  L+      GG      WS   +  +++    +R   
Sbjct: 129 GNRIVSGSDDNTLKVWSAVTGK-CLRTLVGHTGG-----VWSSQMRDNIIISGSTDRTLK 182
Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           V+ +ETG  +  + G +  +        R   +++GS D T+ V++    +       H 
Sbjct: 183 VWNAETGECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHV 239
Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL 332
             V+ V+Y   G    S  +D  V ++D  +   +  L    H   VY++ +  DG  ++
Sbjct: 240 AAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTL--QGHTNRVYSLQF--DGIHVV 293
Query: 333 TASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS 392
           + S D + ++WD+ET + +   + G+Q     +    + + L++ +    +   D+    
Sbjct: 294 SGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQ 350
Query: 393 TPIRVIKGHNKPITAL-ALSPDRGTVFTGSHDGFITRWNAKTGENDR----VQGAGHGNQ 447
             ++ ++G NK  +A+  L  ++  V T S DG +  W+ KTGE  R    ++  G G  
Sbjct: 351 C-LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 409
Query: 448 INGMKATGELLYTCGI 463
           +  ++A+   L  C +
Sbjct: 410 VWRIRASNTKL-VCAV 424

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 115/263 (43%), Gaps = 22/263 (8%)
Query: 244 RIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS 303
           RI++GS+DNT+ V+     K   T   H+  V + +   +     S   D  + +++  +
Sbjct: 131 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAET 188
Query: 304 ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQ 363
            + +  L    H   V  +       ++++ S D T ++WDIET   +   +MG+     
Sbjct: 189 GECIHTL--YGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCL-HVLMGHVAA-- 241
Query: 364 QVSCLWQGDYLLTVSLSGFISYLDVNNPSTP--IRVIKGHNKPITALALSPDRGTVFTGS 421
            V C+ Q D    VS   +   + V +P T   +  ++GH   + +L    D   V +GS
Sbjct: 242 -VRCV-QYDGRRVVS-GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGS 296
Query: 422 HDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSS----NAY 477
            D  I  W+ +TG N      GH +  +GM+    +L +   D T+K  D+ +       
Sbjct: 297 LDTSIRVWDVETG-NCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTL 355
Query: 478 SGPEVKLGSQPRGLDIDENTLVT 500
            GP  K  S    L  ++N ++T
Sbjct: 356 QGPN-KHQSAVTCLQFNKNFVIT 377

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 133/340 (39%), Gaps = 70/340 (20%)
Query: 121 LKNEFHPIGGPIKDIGTLLSLTS----IRNILVLSIGFYIASGDISGKVRIWDTVNKEHI 176
           L N  +       DI  LL +      I ++  +  G Y+A G  S +V++WD   ++ +
Sbjct: 123 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182
Query: 177 LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCD 236
                H     +  ++W   N  ++  G    R GH+   +   +               
Sbjct: 183 RNMTSH--SARVGSLSW---NSYILSSGS---RSGHIHHHDVRVA--------------- 219
Query: 237 FKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKV 296
                         ++ +A   G           HS+ V  +R++P G H AS G D  V
Sbjct: 220 --------------EHHVATLSG-----------HSQEVCGLRWAPDGRHLASGGNDNLV 254
Query: 297 FLYDGASAD--LVSELGNPAHKGGVYAVAWKPDGTQLLTASG---DKTCKLWDIETKSVV 351
            ++  A  +   V       H+G V AVAW P  + +L   G   D+  ++W++ + + +
Sbjct: 255 NVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 314
Query: 352 SEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFI-SYLDVNNPSTPIRV--IKGHNKPITAL 408
           S     +QV     S LW   Y   +S  GF  + L +    T  +V  +KGH   + +L
Sbjct: 315 SAVDAHSQV----CSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSL 370
Query: 409 ALSPDRGTVFTGSHDGFITRWN------AKTGENDRVQGA 442
            +SPD  TV + + D  +  W       A+  E ++   A
Sbjct: 371 TMSPDGATVASAAADETLRLWRCFELDPARRREREKASAA 410

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 234 SCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD 293
           +C + PS P RI+           + P  +       +  ++  V +S SG+  A A  D
Sbjct: 85  TCRYIPSLPDRIL-----------DAPEIR-------NDYYLNLVDWS-SGNVLAVA-LD 124
Query: 294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSE 353
             V+L+  +S D++  L        + +VAW  +G  L   +     +LWD++ +  +  
Sbjct: 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184
Query: 354 FIMGNQVEDQQVSCLWQGDYLLTV-SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSP 412
                     +V  L    Y+L+  S SG I + DV      +  + GH++ +  L  +P
Sbjct: 185 MTS----HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP 240
Query: 413 DRGTVFTGSHDGFITRWNAKTGE 435
           D   + +G +D  +  W +  GE
Sbjct: 241 DGRHLASGGNDNLVNVWPSAPGE 263

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 128/311 (41%), Gaps = 43/311 (13%)
Query: 331 LLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW--QGDYLLTVSLSGFISYLDV 388
           +L  + D +  LW   +  ++ + +   Q  +   S  W  +G+YL   + S  +   DV
Sbjct: 118 VLAVALDNSVYLWSASSGDIL-QLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDV 176
Query: 389 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQI 448
                 +R +  H+  + +L  S +   + +GS  G I   + +  E+     +GH  ++
Sbjct: 177 QQQKR-LRNMTSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV 233
Query: 449 NGMKAT--GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQI 506
            G++    G  L + G D+ +       N +     + G  P         L T T  Q 
Sbjct: 234 CGLRWAPDGRHLASGGNDNLV-------NVWPSAPGEGGWVP---------LQTFTQHQG 277
Query: 507 SIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGP 566
           ++      V+  P            +  ++A GG  S  HI   N  S +  + +D    
Sbjct: 278 AV----KAVAWCPW-----------QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ 322
Query: 567 VTDCSFSPSNEYLVASD--AHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVA 624
           V    +SP  + L++    A  ++V+++ P   +A   E   H+++V  +  SPD A VA
Sbjct: 323 VCSILWSPHYKELISGHGFAQNQLVIWKYPT--MAKVAELKGHTSRVLSLTMSPDGATVA 380
Query: 625 SGSLDTTIIIW 635
           S + D T+ +W
Sbjct: 381 SAAADETLRLW 391

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 133/340 (39%), Gaps = 70/340 (20%)
Query: 121 LKNEFHPIGGPIKDIGTLLSLTS----IRNILVLSIGFYIASGDISGKVRIWDTVNKEHI 176
           L N  +       DI  LL +      I ++  +  G Y+A G  S +V++WD   ++ +
Sbjct: 134 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 193
Query: 177 LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCD 236
                H     +  ++W   N  ++  G    R GH+   +   +               
Sbjct: 194 RNMTSH--SARVGSLSW---NSYILSSGS---RSGHIHHHDVRVA--------------- 230
Query: 237 FKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKV 296
                         ++ +A   G           HS+ V  +R++P G H AS G D  V
Sbjct: 231 --------------EHHVATLSG-----------HSQEVCGLRWAPDGRHLASGGNDNLV 265
Query: 297 FLYDGASAD--LVSELGNPAHKGGVYAVAWKPDGTQLLTASG---DKTCKLWDIETKSVV 351
            ++  A  +   V       H+G V AVAW P  + +L   G   D+  ++W++ + + +
Sbjct: 266 NVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 325
Query: 352 SEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFI-SYLDVNNPSTPIRV--IKGHNKPITAL 408
           S     +QV     S LW   Y   +S  GF  + L +    T  +V  +KGH   + +L
Sbjct: 326 SAVDAHSQV----CSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSL 381
Query: 409 ALSPDRGTVFTGSHDGFITRWN------AKTGENDRVQGA 442
            +SPD  TV + + D  +  W       A+  E ++   A
Sbjct: 382 TMSPDGATVASAAADETLRLWRCFELDPARRREREKASAA 421

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 234 SCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD 293
           +C + PS P RI+           + P  +       +  ++  V +S SG+  A A  D
Sbjct: 96  TCRYIPSLPDRIL-----------DAPEIR-------NDYYLNLVDWS-SGNVLAVA-LD 135
Query: 294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSE 353
             V+L+  +S D++  L        + +VAW  +G  L   +     +LWD++ +  +  
Sbjct: 136 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 195
Query: 354 FIMGNQVEDQQVSCLWQGDYLLTV-SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSP 412
                     +V  L    Y+L+  S SG I + DV      +  + GH++ +  L  +P
Sbjct: 196 MTS----HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP 251
Query: 413 DRGTVFTGSHDGFITRWNAKTGE 435
           D   + +G +D  +  W +  GE
Sbjct: 252 DGRHLASGGNDNLVNVWPSAPGE 274

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 128/311 (41%), Gaps = 43/311 (13%)
Query: 331 LLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW--QGDYLLTVSLSGFISYLDV 388
           +L  + D +  LW   +  ++ + +   Q  +   S  W  +G+YL   + S  +   DV
Sbjct: 129 VLAVALDNSVYLWSASSGDIL-QLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDV 187
Query: 389 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQI 448
                 +R +  H+  + +L  S +   + +GS  G I   + +  E+     +GH  ++
Sbjct: 188 QQQKR-LRNMTSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV 244
Query: 449 NGMKAT--GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQI 506
            G++    G  L + G D+ +       N +     + G  P         L T T  Q 
Sbjct: 245 CGLRWAPDGRHLASGGNDNLV-------NVWPSAPGEGGWVP---------LQTFTQHQG 288
Query: 507 SIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGP 566
           ++      V+  P            +  ++A GG  S  HI   N  S +  + +D    
Sbjct: 289 AV----KAVAWCPW-----------QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ 333
Query: 567 VTDCSFSPSNEYLVASD--AHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVA 624
           V    +SP  + L++    A  ++V+++ P   +A   E   H+++V  +  SPD A VA
Sbjct: 334 VCSILWSPHYKELISGHGFAQNQLVIWKYPT--MAKVAELKGHTSRVLSLTMSPDGATVA 391
Query: 625 SGSLDTTIIIW 635
           S + D T+ +W
Sbjct: 392 SAAADETLRLW 402

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 127/323 (39%), Gaps = 64/323 (19%)
Query: 121 LKNEFHPIGGPIKDIGTLLSLTS----IRNILVLSIGFYIASGDISGKVRIWDTVNKEHI 176
           L N  +       DI  LL +      I ++  +  G Y+A G  S +V++WD   ++ +
Sbjct: 43  LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 102
Query: 177 LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCD 236
                H     +  ++W   N  ++  G    R GH+   +   +               
Sbjct: 103 RNMTSH--SARVGSLSW---NSYILSSGS---RSGHIHHHDVRVA--------------- 139
Query: 237 FKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKV 296
                         ++ +A   G           HS+ V  +R++P G H AS G D  V
Sbjct: 140 --------------EHHVATLSG-----------HSQEVCGLRWAPDGRHLASGGNDNLV 174
Query: 297 FLYDGASAD--LVSELGNPAHKGGVYAVAWKPDGTQLLTASG---DKTCKLWDIETKSVV 351
            ++  A  +   V       H+G V AVAW P  + +L   G   D+  ++W++ + + +
Sbjct: 175 NVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 234
Query: 352 SEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFI-SYLDVNNPSTPIRV--IKGHNKPITAL 408
           S     +QV     S LW   Y   +S  GF  + L +    T  +V  +KGH   + +L
Sbjct: 235 SAVDAHSQV----CSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSL 290
Query: 409 ALSPDRGTVFTGSHDGFITRWNA 431
            +SPD  TV + + D  +  W  
Sbjct: 291 TMSPDGATVASAAADETLRLWRC 313

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 234 SCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD 293
           +C + PS P RI+           + P  +       +  ++  V +S SG+  A A  D
Sbjct: 5   TCRYIPSLPDRIL-----------DAPEIR-------NDYYLNLVDWS-SGNVLAVA-LD 44
Query: 294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSE 353
             V+L+  +S D++  L        + +VAW  +G  L   +     +LWD++ +  +  
Sbjct: 45  NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104
Query: 354 FIMGNQVEDQQVSCLWQGDYLLTV-SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSP 412
                     +V  L    Y+L+  S SG I + DV      +  + GH++ +  L  +P
Sbjct: 105 MTS----HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP 160
Query: 413 DRGTVFTGSHDGFITRWNAKTGENDRV 439
           D   + +G +D  +  W +  GE   V
Sbjct: 161 DGRHLASGGNDNLVNVWPSAPGEGGWV 187

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 128/311 (41%), Gaps = 43/311 (13%)
Query: 331 LLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW--QGDYLLTVSLSGFISYLDV 388
           +L  + D +  LW   +  ++ + +   Q  +   S  W  +G+YL   + S  +   DV
Sbjct: 38  VLAVALDNSVYLWSASSGDIL-QLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDV 96
Query: 389 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQI 448
                 +R +  H+  + +L  S +   + +GS  G I   + +  E+     +GH  ++
Sbjct: 97  QQQKR-LRNMTSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV 153
Query: 449 NGMKAT--GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQI 506
            G++    G  L + G D+ +       N +     + G  P         L T T  Q 
Sbjct: 154 CGLRWAPDGRHLASGGNDNLV-------NVWPSAPGEGGWVP---------LQTFTQHQG 197
Query: 507 SIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGP 566
           ++      V+  P            +  ++A GG  S  HI   N  S +  + +D    
Sbjct: 198 AV----KAVAWCPW-----------QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ 242
Query: 567 VTDCSFSPSNEYLVASD--AHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVA 624
           V    +SP  + L++    A  ++V+++ P   +A   E   H+++V  +  SPD A VA
Sbjct: 243 VCSILWSPHYKELISGHGFAQNQLVIWKYP--TMAKVAELKGHTSRVLSLTMSPDGATVA 300
Query: 625 SGSLDTTIIIW 635
           S + D T+ +W
Sbjct: 301 SAAADETLRLW 311

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 157 ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVV---VGEGRERFGHV 213
           AS  +   +R+WD  N + I   +  P+      +A+SPD+Q +     VG+      ++
Sbjct: 96  ASSSLDAHIRLWDLENGKQIKSIDAGPVDAWT--LAFSPDSQYLATGTHVGKV-----NI 148
Query: 214 FMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSR 273
           F  E+G     +  + K I S  + P   + + +G+ D  I +F+    K   T + H+ 
Sbjct: 149 FGVESGKKEYSLDTRGKFILSIAYSPDGKY-LASGAIDGIINIFDIATGKLLHTLEGHAM 207
Query: 274 FVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLT 333
            ++++ +SP      +A  DG + +YD   A+L   L    H   V  VA+ PD T  ++
Sbjct: 208 PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL--SGHASWVLNVAFCPDDTHFVS 265
Query: 334 ASGDKTCKLWDIETKSVVSEFI 355
           +S DK+ K+WD+ T++ V  F 
Sbjct: 266 SSSDKSVKVWDVGTRTCVHTFF 287

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 8/191 (4%)
Query: 245 IITGSEDNTIAVFE--GPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGA 302
           ++TGS D+ + V++        + + + H   V +V  S +    AS+  D  + L+D  
Sbjct: 51  VVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 110
Query: 303 SADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIET-KSVVSEFIMGNQVE 361
           +   +  +   A     + +A+ PD   L T +      ++ +E+ K   S    G  + 
Sbjct: 111 NGKQIKSI--DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL 168
Query: 362 DQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS 421
               S    G YL + ++ G I+  D+      +  ++GH  PI +L  SPD   + T S
Sbjct: 169 SIAYSP--DGKYLASGAIDGIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQLLVTAS 225
Query: 422 HDGFITRWNAK 432
            DG+I  ++ +
Sbjct: 226 DDGYIKIYDVQ 236

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 114/285 (40%), Gaps = 24/285 (8%)
Query: 156 IASGDISGKVRIWD--TVNKEH--------ILKNEFHPIGGPIKDIAWSPDNQRMVVVGE 205
           + S    GK+ IWD  T NK H        ++   + P G  +       DN  +  +  
Sbjct: 81  LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA--CGGLDN--ICSIYN 136
Query: 206 GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK 265
            + R G+V +S       E++G +  ++ C F      +I+T S D T A+++    +  
Sbjct: 137 LKTREGNVRVSR------ELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQT 188
Query: 266 MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWK 325
            T   H+  V ++  +P    F S   D    L+D      +       H+  + A+ + 
Sbjct: 189 TTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG--MCRQTFTGHESDINAICFF 246
Query: 326 PDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY 385
           P+G    T S D TC+L+D+     +  +   N +         +   LL      F   
Sbjct: 247 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 306
Query: 386 LDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
           +     +    V+ GH+  ++ L ++ D   V TGS D F+  WN
Sbjct: 307 VWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 351

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 114/285 (40%), Gaps = 24/285 (8%)
Query: 156 IASGDISGKVRIWD--TVNKEH--------ILKNEFHPIGGPIKDIAWSPDNQRMVVVGE 205
           + S    GK+ IWD  T NK H        ++   + P G  +       DN  +  +  
Sbjct: 70  LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA--CGGLDN--ICSIYN 125
Query: 206 GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK 265
            + R G+V +S       E++G +  ++ C F      +I+T S D T A+++    +  
Sbjct: 126 LKTREGNVRVSR------ELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQT 177
Query: 266 MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWK 325
            T   H+  V ++  +P    F S   D    L+D      +       H+  + A+ + 
Sbjct: 178 TTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG--MCRQTFTGHESDINAICFF 235
Query: 326 PDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY 385
           P+G    T S D TC+L+D+     +  +   N +         +   LL      F   
Sbjct: 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 386 LDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
           +     +    V+ GH+  ++ L ++ D   V TGS D F+  WN
Sbjct: 296 VWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 114/285 (40%), Gaps = 24/285 (8%)
Query: 156 IASGDISGKVRIWD--TVNKEH--------ILKNEFHPIGGPIKDIAWSPDNQRMVVVGE 205
           + S    GK+ IWD  T NK H        ++   + P G  +       DN  +  +  
Sbjct: 70  LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA--CGGLDN--ICSIYN 125
Query: 206 GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK 265
            + R G+V +S       E++G +  ++ C F      +I+T S D T A+++    +  
Sbjct: 126 LKTREGNVRVSR------ELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQT 177
Query: 266 MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWK 325
            T   H+  V ++  +P    F S   D    L+D      +       H+  + A+ + 
Sbjct: 178 TTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG--MCRQTFTGHESDINAICFF 235
Query: 326 PDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY 385
           P+G    T S D TC+L+D+     +  +   N +         +   LL      F   
Sbjct: 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 386 LDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
           +     +    V+ GH+  ++ L ++ D   V TGS D F+  WN
Sbjct: 296 VWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 114/285 (40%), Gaps = 24/285 (8%)
Query: 156 IASGDISGKVRIWD--TVNKEH--------ILKNEFHPIGGPIKDIAWSPDNQRMVVVGE 205
           + S    GK+ IWD  T NK H        ++   + P G  +       DN  +  +  
Sbjct: 70  LLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA--CGGLDN--ICSIYN 125
Query: 206 GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK 265
            + R G+V +S       E++G +  ++ C F      +I+T S D T A+++    +  
Sbjct: 126 LKTREGNVRVSR------ELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQT 177
Query: 266 MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWK 325
            T   H+  V ++  +P    F S   D    L+D      +       H+  + A+ + 
Sbjct: 178 TTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG--MCRQTFTGHESDINAICFF 235
Query: 326 PDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY 385
           P+G    T S D TC+L+D+     +  +   N +         +   LL      F   
Sbjct: 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 386 LDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
           +     +    V+ GH+  ++ L ++ D   V TGS D F+  WN
Sbjct: 296 VWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 114/285 (40%), Gaps = 24/285 (8%)
Query: 156 IASGDISGKVRIWD--TVNKEH--------ILKNEFHPIGGPIKDIAWSPDNQRMVVVGE 205
           + S    GK+ IWD  T NK H        ++   + P G  +       DN  +  +  
Sbjct: 70  LLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA--CGGLDN--ICSIYN 125
Query: 206 GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK 265
            + R G+V +S       E++G +  ++ C F      +I+T S D T A+++    +  
Sbjct: 126 LKTREGNVRVSR------ELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQT 177
Query: 266 MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWK 325
            T   H+  V ++  +P    F S   D    L+D      +       H+  + A+ + 
Sbjct: 178 TTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG--MCRQTFTGHESDINAICFF 235
Query: 326 PDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY 385
           P+G    T S D TC+L+D+     +  +   N +         +   LL      F   
Sbjct: 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 386 LDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
           +     +    V+ GH+  ++ L ++ D   V TGS D F+  WN
Sbjct: 296 VWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 115/304 (37%), Gaps = 56/304 (18%)
Query: 214 FMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE--- 270
            M+E  T  G + G +  +      P  P  I++ S D TI ++       K+T+ E   
Sbjct: 23  MMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMW-------KLTRDETNY 75
Query: 271 ---------HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYA 321
                    HS FV  V  S  G    S  +DG + L+D  +           H   V +
Sbjct: 76  GIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF--VGHTKDVLS 133
Query: 322 VAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW-----QGDYLLT 376
           VA+  D  Q+++ S DKT KLW+      V ++ + ++   + VSC+          +++
Sbjct: 134 VAFSSDNRQIVSGSRDKTIKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190
Query: 377 VSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEN 436
                 +   ++ N       I GH   +  + +SPD     +G  DG    W+   G++
Sbjct: 191 CGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 249
Query: 437 DRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAY-----SGPEVKLGSQPRGL 491
                                LYT    D I  +  S N Y     +GP +K+      +
Sbjct: 250 ---------------------LYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKI 288
Query: 492 DIDE 495
            +DE
Sbjct: 289 IVDE 292

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 135/345 (39%), Gaps = 64/345 (18%)
Query: 314 AHKGGVYAVAWKPDG-TQLLTASGDKTCKLWDI---ETKSVVSEFIMGNQ---VEDQQVS 366
            H G V  +A  P     +L+AS DKT  +W +   ET   + +  +      V D  +S
Sbjct: 36  GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 95
Query: 367 CLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFI 426
               G + L+ S  G +   D+   +T  R + GH K + ++A S D   + +GS D  I
Sbjct: 96  S--DGQFALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTI 152
Query: 427 TRWNAKTGENDRVQGAGHGNQINGMK----ATGELLYTCGIDDTIKQVDLSSNAYSGPEV 482
             WN        VQ   H   ++ ++    ++  ++ +CG D  +K  +L++        
Sbjct: 153 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-------C 205
Query: 483 KLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGAD 542
           KL +   G       L TVTV                            +  L A GG D
Sbjct: 206 KLKTNHIG---HTGYLNTVTVSP--------------------------DGSLCASGGKD 236
Query: 543 SKVHIYELNN-KSLSPKAELDHLGPVTDCSFSPSNEYLVAS--------DAHRKVVLYRV 593
            +  +++LN  K L     LD    +    FSP+  +L A+        D   K+++  +
Sbjct: 237 GQAMLWDLNEGKHL---YTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDEL 293
Query: 594 PDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLA 638
               ++ + +      +   +AWS D   + +G  D  + +W + 
Sbjct: 294 KQEVISTSSK--AEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 119/293 (40%), Gaps = 37/293 (12%)
Query: 156 IASGDISGKVRIWD--TVNKEH--------ILKNEFHPIGGPIKDIAWSPDNQRMV--VV 203
           I S    GKV +WD  T NKEH        ++   + P G  I       DN+  V  + 
Sbjct: 79  IVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIA--CGGLDNKCSVYPLT 136
Query: 204 GEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK 263
            +  E      M+    SV      +  +++C F  S   +I+T S D T A+++    +
Sbjct: 137 FDKNEN-----MAAKKKSVAM---HTNYLSACSFTNS-DMQILTASGDGTCALWDVESGQ 187
Query: 264 FKMTKQEHSRFVQAVRYSPS--GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYA 321
              +   H   V  +  +PS  G+ F S G D K  ++D  S   V       H+  V +
Sbjct: 188 LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF--ETHESDVNS 245
Query: 322 VAWKPDGTQLLTASGDKTCKLWDIETKSVVSEF-----IMGNQVEDQQVSCLWQGDYLLT 376
           V + P G    + S D TC+L+D+     V+ +     I G    D  +S    G  L  
Sbjct: 246 VRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLS----GRLLFA 301
Query: 377 VSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRW 429
                 I+  DV   S  + ++ GH   ++ L +SPD     +GS D  +  W
Sbjct: 302 GYNDYTINVWDVLKGS-RVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 115/303 (37%), Gaps = 56/303 (18%)
Query: 215 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE---- 270
           M+E  T  G + G +  +      P  P  I++ S D TI ++       K+T+ E    
Sbjct: 1   MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMW-------KLTRDETNYG 53
Query: 271 --------HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAV 322
                   HS FV  V  S  G    S  +DG + L+D  +           H   V +V
Sbjct: 54  IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF--VGHTKDVLSV 111
Query: 323 AWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW-----QGDYLLTV 377
           A+  D  Q+++ S DKT KLW+      V ++ + ++   + VSC+          +++ 
Sbjct: 112 AFSSDNRQIVSGSRDKTIKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC 168
Query: 378 SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEND 437
                +   ++ N       I GH   +  + +SPD     +G  DG    W+   G++ 
Sbjct: 169 GWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH- 226
Query: 438 RVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAY-----SGPEVKLGSQPRGLD 492
                               LYT    D I  +  S N Y     +GP +K+      + 
Sbjct: 227 --------------------LYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKII 266
Query: 493 IDE 495
           +DE
Sbjct: 267 VDE 269

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 135/345 (39%), Gaps = 64/345 (18%)
Query: 314 AHKGGVYAVAWKPD-GTQLLTASGDKTCKLWDI---ETKSVVSEFIMGNQ---VEDQQVS 366
            H G V  +A  P     +L+AS DKT  +W +   ET   + +  +      V D  +S
Sbjct: 13  GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
Query: 367 CLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFI 426
               G + L+ S  G +   D+   +T  R + GH K + ++A S D   + +GS D  I
Sbjct: 73  S--DGQFALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 427 TRWNAKTGENDRVQGAGHGNQINGMK----ATGELLYTCGIDDTIKQVDLSSNAYSGPEV 482
             WN        VQ   H   ++ ++    ++  ++ +CG D  +K  +L++        
Sbjct: 130 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-------C 182
Query: 483 KLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGAD 542
           KL +   G       L TVTV                            +  L A GG D
Sbjct: 183 KLKTNHIG---HTGYLNTVTVSP--------------------------DGSLCASGGKD 213
Query: 543 SKVHIYELNN-KSLSPKAELDHLGPVTDCSFSPSNEYLVAS--------DAHRKVVLYRV 593
            +  +++LN  K L     LD    +    FSP+  +L A+        D   K+++  +
Sbjct: 214 GQAMLWDLNEGKHL---YTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDEL 270
Query: 594 PDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLA 638
               ++ + +      +   +AWS D   + +G  D  + +W + 
Sbjct: 271 KQEVISTSSK--AEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 313

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 82/210 (39%), Gaps = 8/210 (3%)
Query: 229 SKPINSCDFKPSRPFRIITGSE--DNTIAVF--EGPPFKFKMTKQE-HSRFVQAVRYSPS 283
           + P + C F    P   +  S   D  I ++  EG  +  K    E H R V+ V +SP 
Sbjct: 13  AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC 72
Query: 284 GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLW 343
           G++ ASA FD    ++     D         H+  V +VAW P G  L T S DK+  +W
Sbjct: 73  GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVW 132
Query: 344 DIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS---GFISYLDVNNPSTPIRVIKG 400
           +++ +       + N         +W     L  S S       Y +  +       ++G
Sbjct: 133 EVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEG 192
Query: 401 HNKPITALALSPDRGTVFTGSHDGFITRWN 430
           H   + +LA  P    + + S D  +  W 
Sbjct: 193 HESTVWSLAFDPSGQRLASCSDDRTVRIWR 222

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/356 (21%), Positives = 135/356 (37%), Gaps = 59/356 (16%)
Query: 313 PAH-KGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIM--GNQVEDQQVSCLW 369
           PAH     + +AW P GT L +  GD+  ++W  E  S + + ++  G+Q   ++V+   
Sbjct: 12  PAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP 71
Query: 370 QGDYLLTVSLSGFISYLDVNNPS-TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITR 428
            G+YL + S          N      +  ++GH   + ++A +P    + T S D  +  
Sbjct: 72  CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWV 131
Query: 429 WNAKTGENDRVQGA----GHGNQINGM--KATGELLYTCGIDDTIKQVDLSSNAYSGPEV 482
           W  +  E D  +       H   +  +    + ELL +   DDT+K      + +     
Sbjct: 132 W--EVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCAT 189
Query: 483 KLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPID--------YEPSSISLDHEHG 534
             G +              TV  ++   +G +++S   D        Y P      +E G
Sbjct: 190 LEGHES-------------TVWSLAFDPSGQRLASCSDDRTVRIWRQYLPG-----NEQG 231
Query: 535 LVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLY--- 591
           +   G   S   I  L+           H   + D ++      L  +     + ++   
Sbjct: 232 VACSGSDPSWKCICTLSGF---------HSRTIYDIAWCQLTGALATACGDDAIRVFQED 282
Query: 592 -----RVPDFEL-AHNKEWGFHSAKVNCVAWSP-DSALVASGSLDTTIIIWSLASP 640
                + P F L AH  +   HS  VNCVAW+P +  L+AS S D  +  W    P
Sbjct: 283 PNSDPQQPTFSLTAHLHQ--AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 96/249 (38%), Gaps = 49/249 (19%)
Query: 198 QRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVF 257
           +  ++VG    R   VF   TG  V +       I S    P++P+ +++GS+D T+ ++
Sbjct: 67  KNWIIVGSDDFRI-RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLW 124
Query: 258 EGPP-FKFKMTKQEHSRFVQAVRYSPSG-SHFASAGFDGKVFLYDGASADLVSELGNPAH 315
                +  + T + H  FV  V ++P   S FAS   D  V ++    +     L     
Sbjct: 125 NWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQE 184
Query: 316 KGGVYAVAWK-PDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL 374
           +G  Y   +  PD   ++TAS D T K+WD +TKS V+                      
Sbjct: 185 RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVA---------------------- 222
Query: 375 LTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG 434
                                  ++GH   ++     P    + +GS DG +  WN+ T 
Sbjct: 223 ----------------------TLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260
Query: 435 ENDRVQGAG 443
           + ++    G
Sbjct: 261 KVEKTLNVG 269

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 96/249 (38%), Gaps = 49/249 (19%)
Query: 198 QRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVF 257
           +  ++VG    R   VF   TG  V +       I S    P++P+ +++GS+D T+ ++
Sbjct: 67  KNWIIVGSDDFRI-RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLW 124
Query: 258 EGPP-FKFKMTKQEHSRFVQAVRYSPSG-SHFASAGFDGKVFLYDGASADLVSELGNPAH 315
                +  + T + H  FV  V ++P   S FAS   D  V ++    +     L     
Sbjct: 125 NWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQE 184
Query: 316 KGGVYAVAWK-PDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL 374
           +G  Y   +  PD   ++TAS D T K+WD +TKS V+                      
Sbjct: 185 RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVA---------------------- 222
Query: 375 LTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG 434
                                  ++GH   ++     P    + +GS DG +  WN+ T 
Sbjct: 223 ----------------------TLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260
Query: 435 ENDRVQGAG 443
           + ++    G
Sbjct: 261 KVEKTLNVG 269

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 96/249 (38%), Gaps = 49/249 (19%)
Query: 198 QRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVF 257
           +  ++VG    R   VF   TG  V +       I S    P++P+ +++GS+D T+ ++
Sbjct: 67  KNWIIVGSDDFRI-RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLW 124
Query: 258 EGPP-FKFKMTKQEHSRFVQAVRYSPSG-SHFASAGFDGKVFLYDGASADLVSELGNPAH 315
                +  + T + H  FV  V ++P   S FAS   D  V ++    +     L     
Sbjct: 125 NWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQE 184
Query: 316 KGGVYAVAWK-PDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL 374
           +G  Y   +  PD   ++TAS D T K+WD +TKS V+                      
Sbjct: 185 RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVA---------------------- 222
Query: 375 LTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG 434
                                  ++GH   ++     P    + +GS DG +  WN+ T 
Sbjct: 223 ----------------------TLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260
Query: 435 ENDRVQGAG 443
           + ++    G
Sbjct: 261 KVEKTLNVG 269

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 109/285 (38%), Gaps = 52/285 (18%)
Query: 162 SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTS 221
           SG+V IW+   +  +          P++   +    +  ++VG    R   VF   TG  
Sbjct: 34  SGRVEIWNYETQVEV--RSIQVTETPVRAGKFIA-RKNWIIVGSDDFRI-RVFNYNTGEK 89
Query: 222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP-FKFKMTKQEHSRFVQAVRY 280
           V +       I S    P++P+ +++GS+D T+ ++     +  + T + H  FV  V +
Sbjct: 90  VVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148
Query: 281 SPSG-SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWK-PDGTQLLTASGDK 338
           +P   S FAS   D  V ++    +     L     +G  Y   +  PD   ++TAS D 
Sbjct: 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL 208
Query: 339 TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI 398
           T K+WD +TKS V+                                             +
Sbjct: 209 TIKIWDYQTKSCVA--------------------------------------------TL 224
Query: 399 KGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAG 443
           +GH   ++     P    + +GS DG +  WN+ T + ++    G
Sbjct: 225 EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG 269

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 23/235 (9%)
Query: 232 INSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAG 291
           I S  F P   F + TG+ED  I +++    K  M  Q H + + ++ Y PSG    S  
Sbjct: 126 IRSVCFSPDGKF-LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS 184
Query: 292 FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP-DGTQLLTASGDKTCKLWDIETKSV 350
            D  V ++D  +      L   + + GV  VA  P DG  +   S D+  ++WD ET  +
Sbjct: 185 GDRTVRIWDLRTGQCSLTL---SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 241
Query: 351 V----SEFIMGNQVEDQQVSCLW--QGDYLLTVSLSGFISYLDVNNPS-----------T 393
           V    SE   G   +D   S ++   G  +++ SL   +   ++ N +           T
Sbjct: 242 VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT 301
Query: 394 PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQI 448
                 GH   + ++A + +   + +GS D  +  W+ K+G N  +   GH N +
Sbjct: 302 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG-NPLLMLQGHRNSV 355

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Query: 561 LDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFEL--------AHNKE-WGFHSAK- 610
           LDH   V    FS   EYL A+  ++   +YRV D  L        A NK+    +++  
Sbjct: 61  LDHTSVVCCVKFSNDGEYL-ATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSS 119
Query: 611 ------VNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDND 664
                 +  V +SPD   +A+G+ D  I IW + +  K ++I   H Q   +   +   D
Sbjct: 120 PSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN-RKIVMILQGHEQDIYSLDYFPSGD 178
Query: 665 LLVSVGQDCNTKIWEI 680
            LVS   D   +IW++
Sbjct: 179 KLVSGSGDRTVRIWDL 194

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 148/366 (40%), Gaps = 47/366 (12%)
Query: 120 ILKNEFHPIGGPIKDIGTLLS--LTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHIL 177
           ILKN ++P   P +   T L   +TS+   L     + I   D    +R++D++NK+ +L
Sbjct: 101 ILKNWYNPKFVPQR---TTLRGHMTSVITCLQFEDNYVITGAD-DKMIRVYDSINKKFLL 156
Query: 178 KNEFHPIGGPIKDIAWSPDNQRM-VVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCD 236
           +   H  G       W+       ++V    +R   V+  + G       G +  +   D
Sbjct: 157 QLSGHDGG------VWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLD 210
Query: 237 FKPSRPFR-IITGSEDNTIAVFEGP--------------PFKFKMTKQEHSRFVQAVR-- 279
               +  + I+TGS DNT+ V++ P              P  F  T +E+  FV  +R  
Sbjct: 211 IVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFH-TPEENPYFVGVLRGH 269
Query: 280 ------YSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLT 333
                  S  G+   S  +D  + ++D A    +  L    H   +Y+  +  +  + ++
Sbjct: 270 MASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYIL--SGHTDRIYSTIYDHERKRCIS 327
Query: 334 ASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD-YLLTVSLSGFISYLDVNNPS 392
           AS D T ++WD+E      E +   Q     V  L   D +L++ +  G I   D N+ S
Sbjct: 328 ASMDTTIRIWDLEN----GELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYS 383
Query: 393 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK 452
                   +   IT   +S +   + +GS + F   +N ++G+          +QI  + 
Sbjct: 384 RKFSYHHTNLSAITTFYVSDN--ILVSGSENQF-NIYNLRSGKLVHANILKDADQIWSVN 440
Query: 453 ATGELL 458
             G+ L
Sbjct: 441 FKGKTL 446

>pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 225 ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP------PFKFK-MTKQEHSRFVQA 277
           + G + P+    + P     I +GSED T+ V+E P      P +   +T + H++ V  
Sbjct: 77  VXGHTAPVLDIAWXPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGI 136
Query: 278 VRYSPSGSH-FASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG 336
           V + P+  +   SAG D  + ++D  +   V  LG   H   +Y+V W  DG  + T+  
Sbjct: 137 VAWHPTAQNVLLSAGXDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196
Query: 337 DKTCKLWDIETKSVVSE 353
           DK  ++ +    +VV+E
Sbjct: 197 DKRVRVIEPRKGTVVAE 213

>pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 192 AWSPDNQRMVVVGEGRERFGHVFMSETG---TSVGEISGQSKPINSCDFKPSRPFRIITG 248
           A +P    ++    G   F  + + +TG    +V  + G + P+    + P     I +G
Sbjct: 41  AVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASG 100
Query: 249 SEDNTIAVFEGP------PFKFK-MTKQEHSRFVQAVRYSPSGSH-FASAGFDGKVFLYD 300
           SED T+ V+E P      P +   +T + H++ V  V + P+  +   SAG D  + ++D
Sbjct: 101 SEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWD 160
Query: 301 GASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSE 353
             +   V  LG   H   +Y+V W  DG  + T+  DK  ++ +    +VV+E
Sbjct: 161 VGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAE 213

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 146/366 (39%), Gaps = 47/366 (12%)
Query: 120 ILKNEFHPIGGPIKDIGTLLS--LTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHIL 177
           ILKN ++P   P +   T L    TS+   L     + I   D    +R++D++NK+ +L
Sbjct: 101 ILKNWYNPKFVPQR---TTLRGHXTSVITCLQFEDNYVITGAD-DKXIRVYDSINKKFLL 156
Query: 178 KNEFHPIGGPIKDIAWSPDNQRM-VVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCD 236
           +   H  G       W+       ++V    +R   V+  + G       G +  +   D
Sbjct: 157 QLSGHDGG------VWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLD 210
Query: 237 FKPSRPFR-IITGSEDNTIAVFEGP--------------PFKFKMTKQEHSRFVQAVR-- 279
               +  + I+TGS DNT+ V++ P              P  F  T +E+  FV  +R  
Sbjct: 211 IVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFH-TPEENPYFVGVLRGH 269
Query: 280 ------YSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLT 333
                  S  G+   S  +D  + ++D A    +  L    H   +Y+  +  +  + ++
Sbjct: 270 XASVRTVSGHGNIVVSGSYDNTLIVWDVAQXKCLYIL--SGHTDRIYSTIYDHERKRCIS 327
Query: 334 ASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD-YLLTVSLSGFISYLDVNNPS 392
           AS D T ++WD+E      E     Q     V  L   D +L++ +  G I   D N+ S
Sbjct: 328 ASXDTTIRIWDLEN----GELXYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYS 383
Query: 393 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK 452
                   +   IT   +S +   + +GS + F   +N ++G+          +QI  + 
Sbjct: 384 RKFSYHHTNLSAITTFYVSDN--ILVSGSENQF-NIYNLRSGKLVHANILKDADQIWSVN 440
Query: 453 ATGELL 458
             G+ L
Sbjct: 441 FKGKTL 446

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 110/237 (46%), Gaps = 18/237 (7%)
Query: 144 IRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV 203
           + ++ + + G +  S      +R+W+  N +   K   H     +  +A+SPDN++  +V
Sbjct: 70  VSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHT--KDVLSVAFSPDNRQ--IV 125
Query: 204 GEGRERFGHVFMSETGTSVGEIS--GQSKPINSCDFKPS--RPFRIITGSEDNTIAVFEG 259
             GR+    V+ +  G  +  +S    +  ++   F PS   P  I++G  DN + V++ 
Sbjct: 126 SGGRDNALRVW-NVKGECMHTLSRGAHTDWVSCVRFSPSLDAPV-IVSGGWDNLVKVWDL 183
Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGV 319
              +     + H+ +V +V  SP GS  AS+  DG   L+D    + +SE+   A    +
Sbjct: 184 ATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEM---AAGAPI 240
Query: 320 YAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQ----VEDQQVSCLWQGD 372
             + + P+    + A+ +K  +++D+E K ++ E    +Q    +  + VS  W  D
Sbjct: 241 NQICFSPN-RYWMCAATEKGIRIFDLENKDIIVELAPEHQGSKKIVPECVSIAWSAD 296

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 100/237 (42%), Gaps = 22/237 (9%)
Query: 223 GEISGQSKPINS--CDFKPSRPFRIITGSEDNTIAVFEGPPFKFK---------MTKQEH 271
           G+++G    + S  C   P    ++++ S D T+  +   P +              + H
Sbjct: 7   GQLTGHRGWVTSLACPQTPETATKVVSTSRDKTLLSWGPNPDRHSSECSYGLPDRRLEGH 66
Query: 272 SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQL 331
           S FV  V  S +G+   SA +D  + L++  +     +     H   V +VA+ PD  Q+
Sbjct: 67  SAFVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKF--LGHTKDVLSVAFSPDNRQI 124
Query: 332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQG---DYLLTVSLSGFISYLDV 388
           ++   D   ++W+++ + +     +        VSC+      D  + VS  G+ + + V
Sbjct: 125 VSGGRDNALRVWNVKGECM---HTLSRGAHTDWVSCVRFSPSLDAPVIVS-GGWDNLVKV 180
Query: 389 NNPSTPIRV--IKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAG 443
            + +T   V  +KGH   +T++ +SPD     +   DG    W+   GE      AG
Sbjct: 181 WDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEMAAG 237

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 72/349 (20%), Positives = 138/349 (39%), Gaps = 64/349 (18%)
Query: 315 HKGGVYAVAW--KPD-GTQLLTASGDKTCKLWDIETKSVVSEF--------IMGNQVEDQ 363
           H+G V ++A    P+  T++++ S DKT   W        SE         + G+     
Sbjct: 12  HRGWVTSLACPQTPETATKVVSTSRDKTLLSWGPNPDRHSSECSYGLPDRRLEGHSAFVS 71
Query: 364 QVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHD 423
            V+    G++ ++ S    +   ++ N     + + GH K + ++A SPD   + +G  D
Sbjct: 72  DVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFL-GHTKDVLSVAFSPDNRQIVSGGRD 130
Query: 424 GFITRWNAKTGENDRVQGAGHGNQINGMKATGEL----LYTCGIDDTIKQVDLSSNAYSG 479
             +  WN K      +    H + ++ ++ +  L    + + G D+ +K  DL++     
Sbjct: 131 NALRVWNVKGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATG---- 186
Query: 480 PEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVG 539
              +L +  +G     N + +VTV                            +  L A  
Sbjct: 187 ---RLVTDLKG---HTNYVTSVTVSP--------------------------DGSLCASS 214
Query: 540 GADSKVHIYELNN-KSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPD--- 595
             D    +++L   ++LS   E+    P+    FSP N Y + +   + + ++ + +   
Sbjct: 215 DKDGVARLWDLTKGEALS---EMAAGAPINQICFSP-NRYWMCAATEKGIRIFDLENKDI 270
Query: 596 -FELAHNKEWGFHSAKVNCV--AWSPDSALVASGSLDTTIIIWSLASPA 641
             ELA   + G       CV  AWS D + + SG  D  I +W ++  A
Sbjct: 271 IVELAPEHQ-GSKKIVPECVSIAWSADGSTLYSGYTDNVIRVWGVSENA 318

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 12/217 (5%)
Query: 223 GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFE--GPPFKFKM---TKQEHSRFVQA 277
           G + G +  + S      +P  +++ S D T+  ++  G   KF +   + + HS  VQ 
Sbjct: 11  GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQD 70
Query: 278 VRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD 337
              +  G++  SA +D  + L+D A+ +         HK  V +V      + +++ S D
Sbjct: 71  CTLTADGAYALSASWDKTLRLWDVATGETYQRF--VGHKSDVMSVDIDKKASMIISGSRD 128
Query: 338 KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD----YLLTVSLSGFISYLDVNNPST 393
           KT K+W I+ + + +     + V   +V    + D     +++      +   ++N    
Sbjct: 129 KTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188
Query: 394 PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
               I GHN  I  L  SPD   + +   DG I  WN
Sbjct: 189 EADFI-GHNSNINTLTASPDGTLIASAGKDGEIMLWN 224

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 326 PDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY 385
            DG   L+AS DKT +LWD+ T      F+ G++ +   V    +   +++ S    I  
Sbjct: 75  ADGAYALSASWDKTLRLWDVATGETYQRFV-GHKSDVMSVDIDKKASMIISGSRDKTIKV 133
Query: 386 LDVNNPSTPIRVIKGHNKPITALALSP------DRGTVFTGSHDGFITRWNAKTG--END 437
             +      +  + GHN  ++ + + P      D  T+ +  +D  +  WN      E D
Sbjct: 134 WTIKGQC--LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEAD 191
Query: 438 RVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLSS 474
            +   GH + IN + A+  G L+ + G D  I   +L++
Sbjct: 192 FI---GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227

>pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 74/178 (41%), Gaps = 14/178 (7%)
Query: 267 TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP 326
           T Q HS  V  + +   G   AS G D  V ++D  S+  + +     H   V AVAW P
Sbjct: 212 TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS--IPKFTKTNHNAAVKAVAWCP 269
Query: 327 DGTQLLTASG---DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGF- 382
             + LL   G   DK    W+  T + V+    G+QV     S +W       +S  GF 
Sbjct: 270 WQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQV----TSLIWSPHSKEIMSTHGFP 325
Query: 383 ---ISYLDVNNPSTPIRV-IKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEN 436
              +S    ++     +V I  H+  +   ALSPD   + T + D  +  W    G++
Sbjct: 326 DNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDH 383

>pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 130/317 (41%), Gaps = 54/317 (17%)
Query: 289 SAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETK 348
           +   +  V++++  S   VS L        V +V W  DG+ L    G+    ++D+E++
Sbjct: 108 AVALERNVYVWNADSGS-VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ 166
Query: 349 SVVSEFIMGNQVEDQQVSCL-WQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITA 407
           + +   + G+Q    +V CL W    L + S SG I + DV   +  I  ++GH+  +  
Sbjct: 167 TKL-RTMAGHQA---RVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCG 222
Query: 408 LALSPDRGTVFTGSHDGFITRWNA--------KTGENDRVQGAGHGNQINGMKATGELLY 459
           LA   D   + +G +D  +  W+A        KT  N  V+        + + ATG    
Sbjct: 223 LAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATG---- 278
Query: 460 TCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLP 519
             G  D  KQ+    NA +G                         +++ V+ G++V+SL 
Sbjct: 279 -GGTMD--KQIHF-WNAATG------------------------ARVNTVDAGSQVTSLI 310
Query: 520 IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL-DHLGPVTDCSFSPSNEY 578
             + P S  +   HG       D+ + I+  ++  L+ + ++  H   V   + SP    
Sbjct: 311 --WSPHSKEIMSTHGF-----PDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRI 363
Query: 579 LVASDAHRKVVLYRVPD 595
           L  + +   +  +RV D
Sbjct: 364 LSTAASDENLKFWRVYD 380

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 110/273 (40%), Gaps = 32/273 (11%)
Query: 188 IKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIIT 247
           + D+A S +N     +    ++   ++   TGT+     G    + S  F P    +I++
Sbjct: 79  VSDLALSQEN--CFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNR-QILS 135
Query: 248 GSEDNTIAVFE--GPPFKFKMTKQEHSRFVQAVRYSP----------SGSHFASAGFDGK 295
              +  I ++   G        K+ HS +V  VRYSP             +FAS G+DG+
Sbjct: 136 AGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGR 195
Query: 296 VFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSV-VSEF 354
           + +++    +        AH+  V  ++  P+G  + T   DK   +WDI   +    EF
Sbjct: 196 LKVWN---TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREF 252
Query: 355 IMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI-----------KGHNK 403
             G+ +   Q++   +  ++   +  G   +  +     P+  I           KG N 
Sbjct: 253 DAGSTI--NQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNP 310
Query: 404 PITALALSPDRGTVFTGSHDGFITRWNAKTGEN 436
             T+LA +     +F G  DG I  ++ +T  N
Sbjct: 311 QCTSLAWNALGKKLFAGFTDGVIRTFSFETSAN 343

>pdb|3BG0|A Chain A, Architecture Of A Coat For The Nuclear Pore Membrane Length = 316

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 113/304 (37%), Gaps = 56/304 (18%)
Query: 77  ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIG 136
           I+ + T H   ++ A+    G  +A+      V+I+D  N   IL  +     GP+  + 
Sbjct: 5   INTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVA 64
Query: 137 TLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPD 196
               +           G  +AS     KV IW   N      +E       +  + W+P 
Sbjct: 65  WAHPM----------YGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPH 114
Query: 197 NQRMVVV--------------GEGRERFGHVFMSET--------------GTSVGEISGQ 228
           +  +++               GEG+     +  + T              G+ +   SGQ
Sbjct: 115 DYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQ 174
Query: 229 SKPINSCDFKPSRPFRIITGSEDNTIAVF---EGPPFKFKMTKQEHSRFVQAVRYSPS-- 283
                    KP+   R  +G  DN I ++   E   +K +   + HS +V+ V ++PS  
Sbjct: 175 ---------KPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG 225
Query: 284 --GSHFASAGFDGKVFLY--DGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKT 339
              S  AS   DG+VF++  D AS++  S          V+ V+W      L  + GD  
Sbjct: 226 LPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNK 285
Query: 340 CKLW 343
             LW
Sbjct: 286 VTLW 289

>pdb|1R5M|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Sif2 Length = 425

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/228 (19%), Positives = 94/228 (41%), Gaps = 17/228 (7%)
Query: 261 PFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVY 320
           PF    +  + +  V  + +S  G+   +   +G++ L++   A L++ L    H+  + 
Sbjct: 97  PFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGA-LLNVLN--FHRAPIV 153
Query: 321 AVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIM----GNQVEDQQ--------VSCL 368
           +V W  DGT +++   +    LW++ + +V+  F +    G+ +  +         V   
Sbjct: 154 SVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVE 213
Query: 369 WQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITR 428
           W  D    +       ++      TP   + GH+ PI+ L  +     + + S DG +  
Sbjct: 214 WVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRI 273
Query: 429 WNAKTGENDRVQGAGHGNQINGMKATG-ELLYTCGIDDTIKQVDLSSN 475
           W+   G N +    GH   I      G + + +C +D +++   L  N
Sbjct: 274 WHGGNG-NSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQN 320

>pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 23/153 (15%)
Query: 335 SGDKTC-KLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSL------------SG 381
           +G K C K+WDI           GN+    Q+ CL + +Y+ +  L            + 
Sbjct: 68  TGGKGCVKVWDISHP--------GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS 119
Query: 382 FISYLDVNNPSTPIRVIKGHNKPIT-ALALSPDRGTVFTGSHDGFITRWNAKTGENDR-V 439
            +S  D+  P+  I+     + P   ALA+SPD    F+   DG I  W+       R  
Sbjct: 120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 179
Query: 440 QGAGHGNQINGMKATGELLYTCGIDDTIKQVDL 472
           QG   G     +   G  L+T G+D+T++  DL
Sbjct: 180 QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 88/212 (41%), Gaps = 14/212 (6%)
Query: 267 TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP 326
            + E S+ V  ++Y        S   D  + ++D  + +    L    H G V  + +  
Sbjct: 128 CRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRIL--TGHTGSVLCLQY-- 181
Query: 327 DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYL 386
           D   ++T S D T ++WD+ T  +++  I   +     +   +    ++T S    I+  
Sbjct: 182 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA---VLHLRFNNGMMVTCSKDRSIAVW 238
Query: 387 DVNNPS--TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGH 444
           D+ +P+  T  RV+ GH   +  +    D   + + S D  I  WN  T E  R    GH
Sbjct: 239 DMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN-GH 295
Query: 445 GNQINGMKATGELLYTCGIDDTIKQVDLSSNA 476
              I  ++    L+ +   D+TI+  D+   A
Sbjct: 296 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGA 327

>pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 22/181 (12%)
Query: 269 QEHSRFVQAVRYSPSGSH-FASAGFDGKVFLYD--GASADLVS------------ELGNP 313
           Q H + + AV +SP   +  A+A  D +V L+D   AS  L++            E  N 
Sbjct: 183 QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANT 242
Query: 314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI---ETKSVVSEFIMGNQVEDQQ--VSCL 368
           AH G V  + +  DG  LLT   D   +LW+    E   V    +  N  +  +  VSC 
Sbjct: 243 AHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCG 302
Query: 369 WQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITR 428
              +++     S    Y   +     I ++KGH K +       +   +++GS D  I  
Sbjct: 303 CSSEFVFVPYGSTIAVYTVYSGEQ--ITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILA 360
Query: 429 W 429
           W
Sbjct: 361 W 361

>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/213 (21%), Positives = 87/213 (40%), Gaps = 22/213 (10%)
Query: 155 YIASGDISGKVRIWD--TVNKEHIL---KNEFHPIGGPIKDIAWSPDNQRMV--VVGEGR 207
           Y+ S      + +WD     KEH +   KN F      ++D+AW   ++ +   V  + +
Sbjct: 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQK 255
Query: 208 ERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT 267
                   + T      +   +  +N   F P   F + TGS D T+A+++    K K+ 
Sbjct: 256 LMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH 315
Query: 268 KQE-HSRFVQAVRYSPSGSH-FASAGFDGKVFLYD-----GASADLVSELGNP------- 313
             E H   +  V++SP      AS+G D ++ ++D        +   +E G P       
Sbjct: 316 SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG 375
Query: 314 AHKGGVYAVAWKPDGTQLL-TASGDKTCKLWDI 345
            H   +   +W P+   ++ + S D   ++W +
Sbjct: 376 GHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408

>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 23/160 (14%)
Query: 542 DSKVHIYEL-NNKSLSPKAELD-HLGPVTDCSFSPSNEYLVAS-DAHRKVVLYRVPDFEL 598
           D K+ I++  NN +  P   +D H   V   SF+P +E+++A+  A + V L+ + + +L
Sbjct: 253 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 312
Query: 599 A-HNKEWGFHSAKVNCVAWSP-DSALVASGSLDTTIIIWSLAS-------------PAKH 643
             H+ E   H  ++  V WSP +  ++AS   D  + +W L+              P + 
Sbjct: 313 KLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 370
Query: 644 IIIKNAHPQSQITRLQWLDND--LLVSVGQDCNTKIWEIA 681
           + I   H  ++I+   W  N+  ++ SV +D   ++W++A
Sbjct: 371 LFIHGGH-TAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409

>pdb|4G56|B Chain B, Crystal Structure Of Full Length Prmt5/mep50 Complexes From Xenopus Laevis Length = 357

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 22/254 (8%)
Query: 88  VNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNI 147
            +VA  S  G  +AS   SG V +W+ + KE +L N+F        DI        ++ +
Sbjct: 98  TDVAWVSEKGILVASD--SGAVELWEILEKESLLVNKFAKY--EHDDI--------VKTL 145
Query: 148 LVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVV-VGE- 205
            V S G    SG     V++WD ++++ +LK+ ++     +  +A  P    + +  GE 
Sbjct: 146 SVFSDGTQAVSGGKDFSVKVWD-LSQKAVLKS-YNAHSSEVNCVAACPGKDTIFLSCGED 203
Query: 206 GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK 265
           GR         +  T +   +  + P  S  + P +      G E   +++         
Sbjct: 204 GRILLWDTRKPKPATRIDFCASDTIP-TSVTWHPEKDDTFACGDETGNVSLVNIKNPDSA 262
Query: 266 MTKQEHSRFVQAVRYSPSGSHF-ASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW 324
            T   HS+ +  + YS   S F AS   D  V + D   AD      + +H+  V  VAW
Sbjct: 263 QTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLD---ADFSEVFRDLSHRDFVTGVAW 319
Query: 325 KP-DGTQLLTASGD 337
            P D ++  T   D
Sbjct: 320 SPLDHSKFTTVGWD 333

>pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 23/160 (14%)
Query: 542 DSKVHIYEL-NNKSLSPKAELD-HLGPVTDCSFSPSNEYLVAS-DAHRKVVLYRVPDFEL 598
           D K+ I++  NN +  P   +D H   V   SF+P +E+++A+  A + V L+ + + +L
Sbjct: 257 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 316
Query: 599 A-HNKEWGFHSAKVNCVAWSP-DSALVASGSLDTTIIIWSLAS-------------PAKH 643
             H+ E   H  ++  V WSP +  ++AS   D  + +W L+              P + 
Sbjct: 317 KLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 374
Query: 644 IIIKNAHPQSQITRLQWLDND--LLVSVGQDCNTKIWEIA 681
           + I   H  ++I+   W  N+  ++ SV +D   ++W++A
Sbjct: 375 LFIHGGH-TAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 413

>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/213 (21%), Positives = 87/213 (40%), Gaps = 22/213 (10%)
Query: 155 YIASGDISGKVRIWD--TVNKEHIL---KNEFHPIGGPIKDIAWSPDNQRMV--VVGEGR 207
           Y+ S      + +WD     KEH +   KN F      ++D+AW   ++ +   V  + +
Sbjct: 198 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQK 257
Query: 208 ERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT 267
                   + T      +   +  +N   F P   F + TGS D T+A+++    K K+ 
Sbjct: 258 LMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH 317
Query: 268 KQE-HSRFVQAVRYSPSGSH-FASAGFDGKVFLYD-----GASADLVSELGNP------- 313
             E H   +  V++SP      AS+G D ++ ++D        +   +E G P       
Sbjct: 318 SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG 377
Query: 314 AHKGGVYAVAWKPDGTQLL-TASGDKTCKLWDI 345
            H   +   +W P+   ++ + S D   ++W +
Sbjct: 378 GHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 410

>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 23/160 (14%)
Query: 542 DSKVHIYEL-NNKSLSPKAELD-HLGPVTDCSFSPSNEYLVAS-DAHRKVVLYRVPDFEL 598
           D K+ I++  NN +  P   +D H   V   SF+P +E+++A+  A + V L+ + + +L
Sbjct: 255 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 314
Query: 599 A-HNKEWGFHSAKVNCVAWSP-DSALVASGSLDTTIIIWSLAS-------------PAKH 643
             H+ E   H  ++  V WSP +  ++AS   D  + +W L+              P + 
Sbjct: 315 KLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 372
Query: 644 IIIKNAHPQSQITRLQWLDND--LLVSVGQDCNTKIWEIA 681
           + I   H  ++I+   W  N+  ++ SV +D   ++W++A
Sbjct: 373 LFIHGGH-TAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 411

>pdb|2PM9|A Chain A, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 416

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 31/265 (11%)
Query: 48  IVLGGDPKGKNFLYTNGNSVIIRNIENPAISDI--YTEHSCAVNVAKY-SPSGFYIASGD 104
           I+ G    G   LY+        N  N AI+ +  ++ HS +V   K+ +     +ASG 
Sbjct: 81  IIAGALDNGSLELYS-------TNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGG 133
Query: 105 ISGKVRIWDTVNKEHILKNEFHPI--GGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS 162
            +G++ IWD +NK     + + P+  G  +  +  ++SL   +     S+    AS   S
Sbjct: 134 NNGEIFIWD-MNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQ-----SLAHVFASAGSS 187
Query: 163 GKVRIWDTVNKEHILKNEFHPIGGPIKD----IAWSPDNQRMVVVGEGRERFGHVF---M 215
               IWD   K+ ++   +      IK     + W P N   V    G +    +    +
Sbjct: 188 NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDL 247
Query: 216 SETGTSVGEIS-GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSR- 273
               T +  ++ G  K I S D+       +++   DNT+ ++   P   +   Q  +R 
Sbjct: 248 RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWN--PESAEQLSQFPARG 305
Query: 274 -FVQAVRYSPSGSH-FASAGFDGKV 296
            +    +++P     FA A FD K+
Sbjct: 306 NWCFKTKFAPEAPDLFACASFDNKI 330

>pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 24/179 (13%)
Query: 523 EPSSISLDHEHGLVAVGGADSKVHIYEL-NNKSLSPKAELD-HLGPVTDCSFSPSNEYLV 580
           E  S  L HE  L      D K+ I++  +N +  P   +D H   V   SF+P +E+++
Sbjct: 231 EDVSWHLLHE-SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
Query: 581 AS-DAHRKVVLYRVPDFELA-HNKEWGFHSAKVNCVAWSP-DSALVASGSLDTTIIIWSL 637
           A+  A + V L+ + + +L  H+ E   H  ++  V WSP +  ++AS   D  + +W L
Sbjct: 290 ATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Query: 638 AS-------------PAKHIIIKNAHPQSQITRLQWLDND--LLVSVGQDCNTKIWEIA 681
           +              P + + I   H  ++I+   W  N+  ++ SV +D   ++W++A
Sbjct: 348 SKIGEEQSPEDAEDGPPELLFIHGGH-TAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 326 PDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY 385
            DG   L+AS DKT +LWD+ T      F+ G++ +   V    +   +++ S    I  
Sbjct: 75  ADGAYALSASWDKTLRLWDVATGETYQRFV-GHKSDVMSVDIDKKASMIISGSRDKTIKV 133
Query: 386 LDVNNPSTPIRVIKGHNKPITALALSP------DRGTVFTGSHDGFITRWNAKTG--END 437
             +      +  + GHN  ++ + + P      D  T+ +  +D  +  WN      E D
Sbjct: 134 WTIKGQC--LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEAD 191
Query: 438 RVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLSS 474
            +   GH + IN + A+  G L+ + G D  I   +L++
Sbjct: 192 FI---GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	683
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
1k32_A	1045	Tricorn protease; protein degradation, substrate g	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
1k32_A	1045	Tricorn protease; protein degradation, substrate g	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.97
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.97
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.97
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.97
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.97
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.96
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.96
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.96
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.96
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.95
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.95
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.95
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.94
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.94
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.94
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.94
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.93
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.93
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.93
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.93
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.93
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.93
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.92
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.92
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.91
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.9
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.9
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.9
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.9
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.9
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.89
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.89
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.89
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.88
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.88
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.88
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.88
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.86
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.86
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.85
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.85
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.85
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.84
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.84
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.83
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.82
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.82
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.81
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.8
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.79
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.79
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.78
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.78
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.78
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.78
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.77
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.77
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.77
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.77
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.76
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.75
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.74
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.72
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.72
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.71
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.71
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.71
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.7
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.7
3v9f_A	781	Two-component system sensor histidine kinase/RESP	99.7
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.7
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.7
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.69
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.68
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.67
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.67
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.66
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.65
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.65
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.64
3v9f_A	781	Two-component system sensor histidine kinase/RESP	99.64
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.64
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.63
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.63
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.61
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.59
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.57
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.56
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	99.54
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.54
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.51
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.51
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.51
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.51
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.48
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.48
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.47
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.46
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.46
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.46
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.44
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.44
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.44
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.43
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.43
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	99.43
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.42
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	99.41
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.4
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.4
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.39
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.37
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.36
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.35
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	99.3
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.29
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.27
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.26
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.26
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.25
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.22
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.2
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	99.2
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	99.19
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.13
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.11
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.09
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.08
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	99.07
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.07
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	99.06
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.05
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.03
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.98
3ott_A	758	Two-component system sensor histidine kinase; beta	98.97
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.95
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.93
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.9
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.9
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.89
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.88
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.87
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.85
3ott_A	758	Two-component system sensor histidine kinase; beta	98.79
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.79
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.77
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.76
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.76
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.75
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.75
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.73
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.68
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.68
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.67
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.67
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.65
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.64
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.64
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.64
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.57
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.55
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.54
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.52
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.47
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.46
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.44
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	98.44
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.36
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.36
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.35
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.33
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.29
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.26
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	98.25
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	98.18
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.18
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.15
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.14
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	98.05
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	98.05
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.01
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.01
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.0
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.87
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.87
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.86
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.85
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	97.65
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	97.6
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.59
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.59
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.51
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	97.45
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.44
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.44
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.44
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.44
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.44
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.43
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.34
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.3
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	97.27
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.27
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	97.26
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.18
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	97.08
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	97.07
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.04
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	97.04
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	97.04
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	96.94
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	96.83
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	96.76
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	96.72
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	96.64
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	96.62
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	96.38
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	96.33
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	96.2
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	96.05
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	96.02
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	95.33
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	95.08
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	94.91
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	94.39
4hvt_A	711	Ritya.17583.B, post-proline cleaving enzyme; ssgci	90.42
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	89.5
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	88.44
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	87.56
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	87.41
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	86.96
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	86.14
4hvt_A	711	Ritya.17583.B, post-proline cleaving enzyme; ssgci	85.79
3no0_A	276	DNA gyrase subunit A; DNA topology, topoisomerase,	85.34
1suu_A	312	DNA gyrase subunit A; topoisomerase,DNA gyrase, be	85.09
3kci_A	389	Probable E3 ubiquitin-protein ligase HERC2; WD40,	84.97
1zi0_A	307	DNA gyrase subunit A; beta pinwheel, topoisomerase	84.52
3l6v_A	370	GYRA, DNA gyrase subunit A; gyrase A C-terminal do	82.96
1suu_A	312	DNA gyrase subunit A; topoisomerase,DNA gyrase, be	82.62
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	82.08
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	81.97
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	81.49
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	81.44
1wp5_A	323	Topoisomerase IV; broken beta-propeller, hairpin-i	81.26
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	80.85

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=1.7e-82  Score=661.39  Aligned_cols=594  Identities=45%  Similarity=0.825  Sum_probs=510.1

Q ss_pred             ccceeecCCCcccCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEE
Q psy15995         31 GNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVR  110 (683)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~  110 (683)
                      .+..++++.|...++.+.+++|||||++|+++.++.|++||+++++....+.+|...|++++|||||++||+|+.|++|+
T Consensus         5 ~~~~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~   84 (611)
T 1nr0_A            5 SQTALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVR   84 (611)
T ss_dssp             EEEEEECCCCCCCTTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             ccccEECCCCCcccCceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEE
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeE
Q psy15995        111 IWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKD  190 (683)
Q Consensus       111 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~  190 (683)
                      |||+.+++..                                                        ....+..|.++|.+
T Consensus        85 lWd~~~~~~~--------------------------------------------------------~~~~~~~~~~~v~~  108 (611)
T 1nr0_A           85 IWDTTQTTHI--------------------------------------------------------LKTTIPVFSGPVKD  108 (611)
T ss_dssp             EEESSSTTCC--------------------------------------------------------EEEEEECSSSCEEE
T ss_pred             EeECCCCcce--------------------------------------------------------eeEeecccCCceEE
Confidence            9998655211                                                        11223345688999


Q ss_pred             EEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc
Q psy15995        191 IAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE  270 (683)
Q Consensus       191 ~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~  270 (683)
                      ++|+||++++++++.+.+....++.|+.++....+.+|...|++++|+|++++.|++++.|++|++||..+++....+.+
T Consensus       109 v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~  188 (611)
T 1nr0_A          109 ISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE  188 (611)
T ss_dssp             EEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC
T ss_pred             EEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeecc
Confidence            99999999999998877666789999999999999999999999999999987799999999999999999999999999


Q ss_pred             cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC-----ccccCeEEEEEccCCCEEEEEECCCcEEEEEC
Q psy15995        271 HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP-----AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI  345 (683)
Q Consensus       271 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  345 (683)
                      |...|.+++|+|++++|++++.|++|++||..+++.+..+...     +|.+.|.+++|+|++++|++++.|++|++||+
T Consensus       189 H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~  268 (611)
T 1nr0_A          189 HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV  268 (611)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             ccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence            9999999999999999999999999999999999888777321     49999999999999999999999999999999


Q ss_pred             CCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCc
Q psy15995        346 ETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGF  425 (683)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  425 (683)
                      .+++.+..+............+.++++.+++++.++.+++|+...+ .....+.+|...|++++|+|++++|++++.|+.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~-~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~  347 (611)
T 1nr0_A          269 ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELG-SIDQVRYGHNKAITALSSSADGKTLFSADAEGH  347 (611)
T ss_dssp             TTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             CCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCC-CcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCc
Confidence            9999888887665555556666778999999999999999998864 456778899999999999999999999999999


Q ss_pred             EEEEcCCCCCcceeccCCCCcceeEEEEe-CCeEEEEEcCCeEEEEeCCCCcccCCc---eecCCCCceeeecCC--eEE
Q psy15995        426 ITRWNAKTGENDRVQGAGHGNQINGMKAT-GELLYTCGIDDTIKQVDLSSNAYSGPE---VKLGSQPRGLDIDEN--TLV  499 (683)
Q Consensus       426 i~~w~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~  499 (683)
                      |++||+.+++........|...+.++.+. +..+++++.|+.+++|+..........   ..+...+..+.+.++  .++
T Consensus       348 v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~  427 (611)
T 1nr0_A          348 INSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAV  427 (611)
T ss_dssp             EEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEE
T ss_pred             EEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEE
Confidence            99999999988777667899999999998 778999999999999998876543221   123334444444433  455


Q ss_pred             EEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEE
Q psy15995        500 TVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYL  579 (683)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  579 (683)
                      ......+.+++.+. ...+++...+.+++++|++++|++|+.|+.|++||+.++........+|...|++++|+|||++|
T Consensus       428 ~~~~~~v~~~~~~~-~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~l  506 (611)
T 1nr0_A          428 AACYKHIAIYSHGK-LTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFL  506 (611)
T ss_dssp             EEESSEEEEEETTE-EEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred             EEeCceEEEEeCCc-eeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEE
Confidence            55667777777665 66667788899999999999999999999999999988754322335699999999999999999


Q ss_pred             EEEeCCCeEEEEECCC-CccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceee-EeecCCCCCCeeE
Q psy15995        580 VASDAHRKVVLYRVPD-FELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHI-IIKNAHPQSQITR  657 (683)
Q Consensus       580 ~~~~~d~~i~i~~~~~-~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~-~~~~~~~~~~v~~  657 (683)
                      ++++.|++|++|++.+ +++.......+|...|++++|+|||++||+++.|++|++|+++++.... .....|+...|++
T Consensus       507 as~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~  586 (611)
T 1nr0_A          507 VATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNS  586 (611)
T ss_dssp             EEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEE
T ss_pred             EEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeE
Confidence            9999999999999987 6655432344599999999999999999999999999999999876443 3333333899999


Q ss_pred             EEEccCCeEEEeeCCCcEEEEeeccC
Q psy15995        658 LQWLDNDLLVSVGQDCNTKIWEIAPF  683 (683)
Q Consensus       658 l~~~~~~~l~s~~~d~~v~vw~~~~~  683 (683)
                      ++|+++..|++++.|++|++|++ +|
T Consensus       587 v~fs~d~~l~s~~~D~~i~lW~~-~~  611 (611)
T 1nr0_A          587 VIWLNETTIVSAGQDSNIKFWNV-PF  611 (611)
T ss_dssp             EEEEETTEEEEEETTSCEEEEEC-CC
T ss_pred             EEEcCCCEEEEecCCCCEEEEec-cC
Confidence            99996556999999999999999 45

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=2.5e-73  Score=593.87  Aligned_cols=560  Identities=23%  Similarity=0.368  Sum_probs=476.8

Q ss_pred             ccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccc
Q psy15995         42 TQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHI  120 (683)
Q Consensus        42 ~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~  120 (683)
                      .|.+.+.+++|||||++||++ .++.|+|||. +++.++++.+|...|++++|+|||++||+++.|++|+|||+ +++.+
T Consensus        14 GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~   91 (577)
T 2ymu_A           14 AHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLL   91 (577)
T ss_dssp             CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEE
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEE
Confidence            466789999999999999988 5789999995 67888899999999999999999999999999999999996 45666


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeE
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRM  200 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  200 (683)
                      ..+..|.              ..|.+++|+|++++|++++.|+.+++|+......   .....+...+..+.++|++..+
T Consensus        92 ~~~~~~~--------------~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~  154 (577)
T 2ymu_A           92 QTLTGHS--------------SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLL---QTLTGHSSSVWGVAFSPDGQTI  154 (577)
T ss_dssp             EEECCCS--------------SCEEEEEECTTSSEEEEEETTSCEEEEETTCCEE---EEECCCSSCEEEEEECTTSSCE
T ss_pred             EEEECCC--------------CCEEEEEECCCCCEEEEEcCCCceeeccccccee---eeccCCCCceeeeeeecCCccc
Confidence            6666554              7799999999999999999999999999876532   3345567899999999999999


Q ss_pred             EEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEE
Q psy15995        201 VVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRY  280 (683)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~  280 (683)
                      +..+....  ..++. ...........|...|.++.++|+++. +++++.|+.|++||. +++....+.+|...|.+++|
T Consensus       155 ~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~  229 (577)
T 2ymu_A          155 ASASDDKT--VKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQT-IASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAF  229 (577)
T ss_dssp             EEEETTSE--EEEEC-TTSCEEEEEECCSSCEEEEEECTTSSC-EEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEE
T ss_pred             eecccccc--eeccc-cceeeeeeccCCCcceeeeeecCCCCE-EEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEE
Confidence            98887753  34443 345566778889999999999999995 999999999999995 66778888999999999999


Q ss_pred             CCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcc
Q psy15995        281 SPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQV  360 (683)
Q Consensus       281 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  360 (683)
                      +|++++|++++.|+.|++||. +++.+..+..  |...|.+++|+|+++.+++++.|+.+++||.. ++....+ ..+..
T Consensus       230 s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~--~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~-~~h~~  304 (577)
T 2ymu_A          230 SPDGQTIASASDDKTVKLWNR-NGQLLQTLTG--HSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTL-TGHSS  304 (577)
T ss_dssp             CTTSSCEEEEETTSCEEEECT-TSCEEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEE-CCCSS
T ss_pred             CCCCCEEEEEeCCCEEEEEeC-CCCEEEEEec--CCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEE-ecCCC
Confidence            999999999999999999995 5666777755  99999999999999999999999999999975 4444443 44556


Q ss_pred             eeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceec
Q psy15995        361 EDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       361 ~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~  440 (683)
                      ....+.++|+++.+++++.++.+++||...  ..+..+.+|...+.+++|+|+++++++++.|+.|++||.. ++.....
T Consensus       305 ~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~--~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~~~~~~~  381 (577)
T 2ymu_A          305 SVWGVAFSPDGQTIASASDDKTVKLWNRNG--QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTL  381 (577)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-CCEEEEE
T ss_pred             CeEEEEECCCCCEEEEEeCCCeEEEEeCCC--CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-CCEEEEe
Confidence            677888999999999999999999999764  4456778899999999999999999999999999999964 4444443


Q ss_pred             cCCCCcceeEEEEe--CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeee
Q psy15995        441 GAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSL  518 (683)
Q Consensus       441 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  518 (683)
                       ..|...|.++.+.  +++|++++.|+.|++|+......                                     ....
T Consensus       382 -~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~-------------------------------------~~~~  423 (577)
T 2ymu_A          382 -TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLL-------------------------------------QTLT  423 (577)
T ss_dssp             -ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEE-------------------------------------EEEE
T ss_pred             -cCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEE-------------------------------------EEec
Confidence             5688999999997  78999999999999999643210                                     1112


Q ss_pred             cCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCcc
Q psy15995        519 PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFEL  598 (683)
Q Consensus       519 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~  598 (683)
                      .+...+.+++++|++++|++++.|+.|++||..... . ....+|...|++++|+||+++|++++.|+.|++||. +++.
T Consensus       424 ~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~-~-~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~  500 (577)
T 2ymu_A          424 GHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQL-L-QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQL  500 (577)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCE-E-EEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCE
T ss_pred             CCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCE-E-EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCE
Confidence            355678999999999999999999999999975433 2 234468999999999999999999999999999996 4555


Q ss_pred             ccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEE
Q psy15995        599 AHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKI  677 (683)
Q Consensus       599 ~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~v  677 (683)
                      ..  .+.+|...|++++|+||+++||+++.||.|++||. +++.+..+..  |.+.|++++|+ |+++|+|++.|++|++
T Consensus       501 ~~--~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~--h~~~v~~~~fs~dg~~l~s~~~D~~i~~  575 (577)
T 2ymu_A          501 LQ--TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG--HSSSVWGVAFSPDGQTIASASSDKTVKL  575 (577)
T ss_dssp             EE--EEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEEC--CSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred             EE--EEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcC--CCCCEEEEEEcCCCCEEEEEeCCCEEEE
Confidence            43  34459999999999999999999999999999996 5676767765  79999999999 7889999999999999


Q ss_pred             Ee
Q psy15995        678 WE  679 (683)
Q Consensus       678 w~  679 (683)
                      ||
T Consensus       576 Wd  577 (577)
T 2ymu_A          576 WN  577 (577)
T ss_dssp             EC
T ss_pred             eC
Confidence            97

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=1.2e-68  Score=564.02  Aligned_cols=576  Identities=30%  Similarity=0.561  Sum_probs=490.2

Q ss_pred             ccceeecCCCcccCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCC----cccccccCcccc-eEEEEECC--CCcEEEEe
Q psy15995         31 GNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENP----AISDIYTEHSCA-VNVAKYSP--SGFYIASG  103 (683)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~----~~~~~~~~h~~~-v~~~~~s~--d~~~las~  103 (683)
                      .++.++++.|..+++.+.+++|||||++|+++.++.|.+||++++    +....+.+|... |++++|+|  ++++||++
T Consensus         5 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~   84 (615)
T 1pgu_A            5 SLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSG   84 (615)
T ss_dssp             EEEEEECCCCCCCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEE
T ss_pred             chhhccCCCCCCccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEe
Confidence            457788899999999999999999999999999999999999998    888899999999 99999999  99999999


Q ss_pred             cCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccc
Q psy15995        104 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHP  183 (683)
Q Consensus       104 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~  183 (683)
                      +.||.|++||+.+++.....                                                  +......+..
T Consensus        85 ~~dg~v~vw~~~~~~~~~~~--------------------------------------------------~~~~~~~~~~  114 (615)
T 1pgu_A           85 DESGKVIVWGWTFDKESNSV--------------------------------------------------EVNVKSEFQV  114 (615)
T ss_dssp             ETTSEEEEEEEEEEGGGTEE--------------------------------------------------EEEEEEEEEC
T ss_pred             cCCCEEEEEeCCCCcccccc--------------------------------------------------cccccchhhc
Confidence            99999999998655211000                                                  0001122334


Q ss_pred             cCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc
Q psy15995        184 IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK  263 (683)
Q Consensus       184 ~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  263 (683)
                      +...|.+++|+|+++++++++.+.+....++.|+.++.+..+.+|...|.+++|+|+++..+++++.|+.|++||..+++
T Consensus       115 ~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~  194 (615)
T 1pgu_A          115 LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK  194 (615)
T ss_dssp             CSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE
T ss_pred             ccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc
Confidence            56889999999999999999988766678999999999999999999999999999998679999999999999999999


Q ss_pred             eeeecccccc---CeEEEEECCC-CCEEEEEcCCCcEEEEeCCCCeeEEeccCC--ccccCeEEEEEccCCCEEEEEECC
Q psy15995        264 FKMTKQEHSR---FVQAVRYSPS-GSHFASAGFDGKVFLYDGASADLVSELGNP--AHKGGVYAVAWKPDGTQLLTASGD  337 (683)
Q Consensus       264 ~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d  337 (683)
                      ....+..|..   .|.+++|+|+ +++|++++.||.|++||+.+++.+..+...  .|...|.+++|+ ++++|++++.|
T Consensus       195 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d  273 (615)
T 1pgu_A          195 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD  273 (615)
T ss_dssp             EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT
T ss_pred             eeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCC
Confidence            9999999999   9999999999 999999999999999999999998888311  389999999999 99999999999


Q ss_pred             CcEEEEECCCCceeeEEEecC---cceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC
Q psy15995        338 KTCKLWDIETKSVVSEFIMGN---QVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR  414 (683)
Q Consensus       338 g~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  414 (683)
                      +.|++||+++++.+..+....   ......+.+ ++++++++++.+|.+++||+.. ..++..+.+|...|.+++| |+ 
T Consensus       274 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~g~i~~~d~~~-~~~~~~~~~~~~~v~~~~~-~~-  349 (615)
T 1pgu_A          274 ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA-TGNGRIISLSLDGTLNFYELGH-DEVLKTISGHNKGITALTV-NP-  349 (615)
T ss_dssp             SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEE-EETTEEEEEETTSCEEEEETTE-EEEEEEECCCSSCEEEEET-TT-
T ss_pred             CcEEEEECCCCcEEEEEcCCCCcccCceeEEEe-CCCCeEEEEECCCCEEEEECCC-CcEEEEEeCCCCCEEEEEe-cC-
Confidence            999999999999888876652   122333333 3899999999999999999987 5667788899999999999 88 


Q ss_pred             CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe-CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeee
Q psy15995        415 GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT-GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDI  493 (683)
Q Consensus       415 ~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (683)
                        +++++.||.|++|++.   ..  . ..|...|.++.+. ++.+++++.|+.+++|++.+.....       .+..+.+
T Consensus       350 --l~~~~~dg~i~~w~~~---~~--~-~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~-------~~~~~~~  414 (615)
T 1pgu_A          350 --LISGSYDGRIMEWSSS---SM--H-QDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGS-------QPKVASA  414 (615)
T ss_dssp             --TEEEETTSCEEETTTT---EE--E-CCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSS-------CEEEEEE
T ss_pred             --cEEECCCCeEEEEEch---hh--c-CcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccC-------CceEEEE
Confidence              9999999999999998   22  2 6789999999998 8899999999999999988765433       3333344


Q ss_pred             cCC--eEEEEEeceEEEEe--CCceeeeecCCCCCcEEEEccCCCEEEEEcC-CCcEEEEEcCCCccCcceeecCCcCee
Q psy15995        494 DEN--TLVTVTVKQISIVE--NGAKVSSLPIDYEPSSISLDHEHGLVAVGGA-DSKVHIYELNNKSLSPKAELDHLGPVT  568 (683)
Q Consensus       494 ~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~v~  568 (683)
                      .++  .+.......+.+++  .++....+.+...+.+++++  ++++++++. |+.|++||+.+++........|...|+
T Consensus       415 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~  492 (615)
T 1pgu_A          415 NNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPS  492 (615)
T ss_dssp             CSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEE
T ss_pred             cCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceE
Confidence            333  33333556677777  67777788888999999999  889999999 999999999987654323345889999


Q ss_pred             EEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecC----------CCCeEEEeecCCcEEEEeCC
Q psy15995        569 DCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSP----------DSALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       569 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~----------d~~~l~~~~~d~~v~iw~~~  638 (683)
                      +++|+|++++|++++.|+.|++||+.+++........ |...|++++|+|          ++++||+++.||.|++||+.
T Consensus       493 ~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~  571 (615)
T 1pgu_A          493 YISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF-RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK  571 (615)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCC-CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS
T ss_pred             EEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecC-CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECC
Confidence            9999999999999999999999999999887554322 899999999999          99999999999999999999


Q ss_pred             CC-ceeeEeecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEeecc
Q psy15995        639 SP-AKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       639 ~~-~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~~~  682 (683)
                      ++ +....+..  |...|++++|+ ++. |++++.|+.|++|+++.
T Consensus       572 ~~~~~~~~~~~--h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~  614 (615)
T 1pgu_A          572 RPMKIIKALNA--HKDGVNNLLWETPST-LVSSGADACIKRWNVVL  614 (615)
T ss_dssp             CTTCCEEETTS--STTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred             CCceechhhhc--CccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence            98 44545443  78999999999 666 99999999999999863

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=2.7e-68  Score=554.67  Aligned_cols=563  Identities=17%  Similarity=0.182  Sum_probs=445.9

Q ss_pred             eccCCCCCCceeecCCCCCCceeeecccceeecCCCcccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCc--ccccc
Q psy15995          5 TLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPA--ISDIY   81 (683)
Q Consensus         5 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~--~~~~~   81 (683)
                      ++.|+|+|+.|+...  .+...++..........+ ..+...+.+++|||||++||++ .++.|+|||+.+++  ....+
T Consensus        23 ~~~~spdg~~l~~~~--~~~v~l~~~~~~~~~~~~-~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~   99 (611)
T 1nr0_A           23 VLGNTPAGDKIQYCN--GTSVYTVPVGSLTDTEIY-TEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTI   99 (611)
T ss_dssp             CCEECTTSSEEEEEE--TTEEEEEETTCSSCCEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEE
T ss_pred             EEeeCCCCCEEEeCC--CCEEEEecCCCcccCeEe-cCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEee
Confidence            466788888777643  234444443222222211 2456689999999999999998 58999999997543  34568


Q ss_pred             cCcccceEEEEECCCCcEEEEecCC----CCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccce-EE
Q psy15995         82 TEHSCAVNVAKYSPSGFYIASGDIS----GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF-YI  156 (683)
Q Consensus        82 ~~h~~~v~~~~~s~d~~~las~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l  156 (683)
                      .+|.++|.+++|+|||++||+++.+    +.|++||  .++....+..|.              ..|.+++|+|++. .|
T Consensus       100 ~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~--------------~~v~~v~f~p~~~~~l  163 (611)
T 1nr0_A          100 PVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQA--------------RAMNSVDFKPSRPFRI  163 (611)
T ss_dssp             ECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCS--------------SCEEEEEECSSSSCEE
T ss_pred             cccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCC--------------CCceEEEECCCCCeEE
Confidence            8999999999999999999988765    3677777  455555555554              7899999999987 69


Q ss_pred             EeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeee-------cCC
Q psy15995        157 ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS-------GQS  229 (683)
Q Consensus       157 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~  229 (683)
                      ++++.|++|++||..+++..  ..+..|...|.+++|+||++++++++.++.  +.+|+..+++....+.       +|.
T Consensus       164 ~s~s~D~~v~lwd~~~~~~~--~~l~~H~~~V~~v~fspdg~~las~s~D~~--i~lwd~~~g~~~~~~~~~~~~~~~h~  239 (611)
T 1nr0_A          164 ISGSDDNTVAIFEGPPFKFK--STFGEHTKFVHSVRYNPDGSLFASTGGDGT--IVLYNGVDGTKTGVFEDDSLKNVAHS  239 (611)
T ss_dssp             EEEETTSCEEEEETTTBEEE--EEECCCSSCEEEEEECTTSSEEEEEETTSC--EEEEETTTCCEEEECBCTTSSSCSSS
T ss_pred             EEEeCCCeEEEEECCCCeEe--eeeccccCceEEEEECCCCCEEEEEECCCc--EEEEECCCCcEeeeeccccccccccC
Confidence            99999999999999887644  456778899999999999999999988765  7899999998888774       799


Q ss_pred             cCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc---cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee
Q psy15995        230 KPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE---HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL  306 (683)
Q Consensus       230 ~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~  306 (683)
                      +.|.+++|+|+++. |++++.|++|++||+.+++....+..   +...+..+.|  +++.+++++.|+.+++|+...++.
T Consensus       240 ~~V~~v~~spdg~~-l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~  316 (611)
T 1nr0_A          240 GSVFGLTWSPDGTK-IASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVNPELGSI  316 (611)
T ss_dssp             SCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEE
T ss_pred             CCEEEEEECCCCCE-EEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCCc
Confidence            99999999999995 99999999999999999988877653   3345666667  677899999999999999999887


Q ss_pred             EEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEE
Q psy15995        307 VSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYL  386 (683)
Q Consensus       307 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~  386 (683)
                      ...+..  |...|.+++|+|++++|++++.|+.|++||+.+++....+...+......+.+++ +..+++++.++.+++|
T Consensus       317 ~~~~~g--h~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~-~~~l~s~s~d~~v~~w  393 (611)
T 1nr0_A          317 DQVRYG--HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS-KGDLFTVSWDDHLKVV  393 (611)
T ss_dssp             EEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECT-TSCEEEEETTTEEEEE
T ss_pred             ceEEcC--CCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECC-CCcEEEEEcCCceEEe
Confidence            777755  9999999999999999999999999999999998776544344555566666664 4578899999999999


Q ss_pred             ecCCCCcce--eeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe--CCeEEEEE
Q psy15995        387 DVNNPSTPI--RVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCG  462 (683)
Q Consensus       387 ~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~  462 (683)
                      +........  ...........+++++|++..++++ .++.+++|+.  ++ ....  .+...+.+++++  ++++++++
T Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~-~~~~v~~~~~--~~-~~~~--~~~~~v~~va~spdg~~lasgs  467 (611)
T 1nr0_A          394 PAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAA-CYKHIAIYSH--GK-LTEV--PISYNSSCVALSNDKQFVAVGG  467 (611)
T ss_dssp             CSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEE-ESSEEEEEET--TE-EEEE--ECSSCEEEEEECTTSCEEEEEE
T ss_pred             ecCCccccccceeeeecCCCCcEEEEeCCCcEEEEE-eCceEEEEeC--Cc-eeee--ecCCCceEEEEeCCCCEEEEeC
Confidence            987633211  0111234456789999999888877 5678999983  33 2222  266778888887  88999999


Q ss_pred             cCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCC
Q psy15995        463 IDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGAD  542 (683)
Q Consensus       463 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d  542 (683)
                      .|+.|++|++.+...                                   .......+...+.+++|+|++++|++++.|
T Consensus       468 ~D~~v~lwd~~~~~~-----------------------------------~~~~~~~h~~~v~~v~fspdg~~las~s~d  512 (611)
T 1nr0_A          468 QDSKVHVYKLSGASV-----------------------------------SEVKTIVHPAEITSVAFSNNGAFLVATDQS  512 (611)
T ss_dssp             TTSEEEEEEEETTEE-----------------------------------EEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCCeEEEEEccCCce-----------------------------------eeeeccCCCCceEEEEECCCCCEEEEEcCC
Confidence            999999999875421                                   011113456689999999999999999999


Q ss_pred             CcEEEEEcCC-CccCcceeec-CCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeee-cccEEEEEecCC
Q psy15995        543 SKVHIYELNN-KSLSPKAELD-HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFH-SAKVNCVAWSPD  619 (683)
Q Consensus       543 g~i~i~d~~~-~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h-~~~v~~~~~s~d  619 (683)
                      ++|++|++.+ ++........ |...|.+++|+|||++||+++.|++|++|++.++.........+| ...|++++|+||
T Consensus       513 ~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d  592 (611)
T 1nr0_A          513 RKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNE  592 (611)
T ss_dssp             SCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEET
T ss_pred             CCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCC
Confidence            9999999987 5554332233 999999999999999999999999999999988653221122348 899999999999


Q ss_pred             CCeEEEeecCCcEEEEeCC
Q psy15995        620 SALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       620 ~~~l~~~~~d~~v~iw~~~  638 (683)
                      ++ |++++.|++|++|++.
T Consensus       593 ~~-l~s~~~D~~i~lW~~~  610 (611)
T 1nr0_A          593 TT-IVSAGQDSNIKFWNVP  610 (611)
T ss_dssp             TE-EEEEETTSCEEEEECC
T ss_pred             CE-EEEecCCCCEEEEecc
Confidence            98 9999999999999974

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=1.9e-67  Score=549.51  Aligned_cols=556  Identities=23%  Similarity=0.355  Sum_probs=463.5

Q ss_pred             eeeccCCCCCCceeecCCCCCCceeeecccceeecCCCcccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccc
Q psy15995          3 FATLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIY   81 (683)
Q Consensus         3 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~   81 (683)
                      +.++.|+|+|++|+.. ..++...+|.. ..+.+..+ ..+.+.+.+++|||||++||++ .++.|+|||. +++.+..+
T Consensus        19 V~~~a~spdg~~las~-~~d~~v~iWd~-~~~~~~~l-~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~   94 (577)
T 2ymu_A           19 VRGVAFSPDGQTIASA-SDDKTVKLWNR-NGQLLQTL-TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL   94 (577)
T ss_dssp             EEEEEECTTSSCEEEE-ETTSEEEEECT-TSCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEE
T ss_pred             EEEEEECCCCCEEEEE-eCCCEEEEEEC-CCCEEEEE-eCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEE
Confidence            4689999999998875 44566666653 23333333 3467789999999999999987 5789999996 56777889


Q ss_pred             cCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC
Q psy15995         82 TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI  161 (683)
Q Consensus        82 ~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  161 (683)
                      .+|...|.+++|+||+++|++++.|+.+++|+....... ....+.              ..+..+.++|++..+++++.
T Consensus        95 ~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~-~~~~~~--------------~~v~~~~~~~~~~~~~~~~~  159 (577)
T 2ymu_A           95 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQ-TLTGHS--------------SSVWGVAFSPDGQTIASASD  159 (577)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEE-EECCCS--------------SCEEEEEECTTSSCEEEEET
T ss_pred             ECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceee-eccCCC--------------CceeeeeeecCCccceeccc
Confidence            999999999999999999999999999999997655322 222222              67889999999999999999


Q ss_pred             CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCC
Q psy15995        162 SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSR  241 (683)
Q Consensus       162 d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  241 (683)
                      ++.+++|+.....   ......+...+..++|+|+++++++++.++.  +.+|+. +++.+..+.+|...|.+++|+|++
T Consensus       160 ~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg  233 (577)
T 2ymu_A          160 DKTVKLWNRNGQL---LQTLTGHSSSVWGVAFSPDGQTIASASDDKT--VKLWNR-NGQLLQTLTGHSSSVRGVAFSPDG  233 (577)
T ss_dssp             TSEEEEECTTSCE---EEEEECCSSCEEEEEECTTSSCEEEEETTSE--EEEECT-TSCEEEEEECCSSCEEEEEECTTS
T ss_pred             ccceeccccceee---eeeccCCCcceeeeeecCCCCEEEEEcCCCE--EEEEeC-CCcEEEEEecCCCCEEEEEECCCC
Confidence            9999999976543   2334456789999999999999999887753  566663 577888899999999999999999


Q ss_pred             CeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEE
Q psy15995        242 PFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYA  321 (683)
Q Consensus       242 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~  321 (683)
                      +. +++++.|+.|++||. +++.+..+.+|...|.+++|+|+++.+++++.|+.|++|+. +++....+..  |...|.+
T Consensus       234 ~~-l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~--h~~~v~~  308 (577)
T 2ymu_A          234 QT-IASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTG--HSSSVWG  308 (577)
T ss_dssp             SC-EEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECC--CSSCEEE
T ss_pred             CE-EEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEec--CCCCeEE
Confidence            95 999999999999995 56778888999999999999999999999999999999995 5666666654  9999999


Q ss_pred             EEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeec
Q psy15995        322 VAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGH  401 (683)
Q Consensus       322 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~  401 (683)
                      ++|+|+++.+++++.|+.+++||...... ..+ ..+......+.++|+++++++++.++.+++|+..  ...+..+.+|
T Consensus       309 ~~~~~~~~~l~t~~~d~~i~~w~~~~~~~-~~~-~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~--~~~~~~~~~~  384 (577)
T 2ymu_A          309 VAFSPDGQTIASASDDKTVKLWNRNGQHL-QTL-TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTGH  384 (577)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTSCEE-EEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--CCEEEEEECC
T ss_pred             EEECCCCCEEEEEeCCCeEEEEeCCCCee-EEE-eCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC--CCEEEEecCC
Confidence            99999999999999999999999875543 333 3455566778899999999999999999999964  4567778899


Q ss_pred             cccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe--CCeEEEEEcCCeEEEEeCCCCcccC
Q psy15995        402 NKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLSSNAYSG  479 (683)
Q Consensus       402 ~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~~~~~~~~~~~  479 (683)
                      ...|.+++|+|++++|++++.|+.|++||.. ++..... ..|...|.++.+.  ++++++++.|+.+++|+.....   
T Consensus       385 ~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~~~~~~~-~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~---  459 (577)
T 2ymu_A          385 SSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTL-TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQL---  459 (577)
T ss_dssp             SSCEEEEEECTTSSCEEEEETTSEEEEECTT-CCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCE---
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-CCEEEEe-cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCE---
Confidence            9999999999999999999999999999964 4444443 5688999999997  7899999999999999975321   


Q ss_pred             CceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcce
Q psy15995        480 PEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKA  559 (683)
Q Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  559 (683)
                                                        ......+...+.+++++|++++|++++.|+.|++||.. ++.. ..
T Consensus       460 ----------------------------------~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~~-~~  503 (577)
T 2ymu_A          460 ----------------------------------LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLL-QT  503 (577)
T ss_dssp             ----------------------------------EEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCEE-EE
T ss_pred             ----------------------------------EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCEE-EE
Confidence                                              11112355678999999999999999999999999964 4433 23


Q ss_pred             eecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEe
Q psy15995        560 ELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWS  636 (683)
Q Consensus       560 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~  636 (683)
                      ..+|...|++++|+||+++|++++.|+.|++||. +++.+.  .+.+|.+.|++++|+||+++|++++.|++|++||
T Consensus       504 ~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~--~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          504 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQ--TLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             EECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEE--EEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEE--EEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence            4469999999999999999999999999999996 455543  3445999999999999999999999999999997

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=2e-67  Score=597.98  Aligned_cols=574  Identities=18%  Similarity=0.216  Sum_probs=493.7

Q ss_pred             ccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccc
Q psy15995         42 TQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHI  120 (683)
Q Consensus        42 ~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~  120 (683)
                      .+.+.+.+++|||||++|+++ .++.|.+||+.+++.+..+.+|...|++++|+|||++||+++.||+|+|||+.+++.+
T Consensus       613 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~  692 (1249)
T 3sfz_A          613 PHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLV  692 (1249)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred             cccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceE
Confidence            456789999999999999987 5789999999999999999999999999999999999999999999999999999888


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeec--cceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCC
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLS--IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQ  198 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  198 (683)
                      ..+..|.              ..+.+++|+|  ++.++++++.|+.|++||+.+++.+  ..+..|.+.|.+++|+|+++
T Consensus       693 ~~~~~~~--------------~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~--~~~~~h~~~v~~~~~sp~~~  756 (1249)
T 3sfz_A          693 HTYDEHS--------------EQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECR--NTMFGHTNSVNHCRFSPDDE  756 (1249)
T ss_dssp             EEEECCS--------------SCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEE--EEECCCSSCEEEEEECSSTT
T ss_pred             EEEcCCC--------------CcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchh--heecCCCCCEEEEEEecCCC
Confidence            8877665              7799999999  5568999999999999999998755  34557889999999999999


Q ss_pred             eEEEEecCCceEEEEEEccCCCceeeeec-------------CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee
Q psy15995        199 RMVVVGEGRERFGHVFMSETGTSVGEISG-------------QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK  265 (683)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  265 (683)
                      ++++++.++.  +.+|+..+++....+..             +...+.+++|+|++.. +++++ ++.+.+||..++...
T Consensus       757 ~l~s~s~dg~--v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~-l~~~~-~~~v~~~d~~~~~~~  832 (1249)
T 3sfz_A          757 LLASCSADGT--LRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK-IIVAA-KNKVLLFDIHTSGLL  832 (1249)
T ss_dssp             EEEEEESSSE--EEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE-EEEEE-TTEEEEEETTTCCEE
T ss_pred             EEEEEECCCe--EEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE-EEEEc-CCcEEEEEecCCCce
Confidence            9999987754  78999988876655432             2347889999999995 66655 689999999998887


Q ss_pred             eecc-ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEE
Q psy15995        266 MTKQ-EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWD  344 (683)
Q Consensus       266 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  344 (683)
                      ..+. +|...|.+++|+|+++++++++.||.|++||+.++..+..+..  |...|.+++|+|+++.+++++.||.+++|+
T Consensus       833 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~--h~~~v~~v~~spdg~~l~s~s~dg~v~vw~  910 (1249)
T 3sfz_A          833 AEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRG--HLSWVHGVMFSPDGSSFLTASDDQTIRVWE  910 (1249)
T ss_dssp             EEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCC--CccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            7765 8899999999999999999999999999999999999988875  999999999999999999999999999999


Q ss_pred             CCCCcee-----------------------------eE-------EEecCcceeceEEEEecCCEEEEEecCCcEEEEec
Q psy15995        345 IETKSVV-----------------------------SE-------FIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDV  388 (683)
Q Consensus       345 ~~~~~~~-----------------------------~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~  388 (683)
                      +.+....                             ..       ...........+.++++++++++++.+|.+.+|++
T Consensus       911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~  990 (1249)
T 3sfz_A          911 TKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIEL  990 (1249)
T ss_dssp             HHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEET
T ss_pred             ccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence            7532100                             00       00112234567788889999999999999999999


Q ss_pred             CCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe-CCeEEEEEcCCeE
Q psy15995        389 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT-GELLYTCGIDDTI  467 (683)
Q Consensus       389 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i  467 (683)
                      .. ......+.+|...|++++|+|+++++++++.||.|++||+.+++....  ..|...+.++.+. +..+++++.|+.+
T Consensus       991 ~~-~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~--~~~~~~v~~~~~~~~~~l~~~~~dg~v 1067 (1249)
T 3sfz_A          991 PN-NRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFL--QAHQETVKDFRLLQDSRLLSWSFDGTV 1067 (1249)
T ss_dssp             TT-TSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECC--BCCSSCEEEEEECSSSEEEEEESSSEE
T ss_pred             CC-CceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEE--ecCCCcEEEEEEcCCCcEEEEECCCcE
Confidence            87 455677788999999999999999999999999999999998876643  4688999999998 7889999999999


Q ss_pred             EEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEE
Q psy15995        468 KQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHI  547 (683)
Q Consensus       468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i  547 (683)
                      ++||+.++....                                    ....+...+.+++++|+++++++++.|+.|++
T Consensus      1068 ~vwd~~~~~~~~------------------------------------~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~i 1111 (1249)
T 3sfz_A         1068 KVWNVITGRIER------------------------------------DFTCHQGTVLSCAISSDATKFSSTSADKTAKI 1111 (1249)
T ss_dssp             EEEETTTTCCCE------------------------------------EEECCSSCCCCEEECSSSSSCEEECCSSCCCE
T ss_pred             EEEECCCCceeE------------------------------------EEcccCCcEEEEEECCCCCEEEEEcCCCcEEE
Confidence            999998764211                                    11124567899999999999999999999999


Q ss_pred             EEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCcccccc-------ceeeecccEEEEEecCCC
Q psy15995        548 YELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNK-------EWGFHSAKVNCVAWSPDS  620 (683)
Q Consensus       548 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~-------~~~~h~~~v~~~~~s~d~  620 (683)
                      ||+.+++..... .+|...|++++|+|++++|++++.||.|++||+.+++.....       ...+|.+.|++++|+||+
T Consensus      1112 wd~~~~~~~~~l-~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg 1190 (1249)
T 3sfz_A         1112 WSFDLLSPLHEL-KGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDS 1190 (1249)
T ss_dssp             ECSSSSSCSBCC-CCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTS
T ss_pred             EECCCcceeeee-ccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCC
Confidence            999988766433 368899999999999999999999999999999998876543       113488999999999999


Q ss_pred             CeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEeec
Q psy15995        621 ALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       621 ~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~~  681 (683)
                      ++|++++  |.|++||+.+++....+..  |...|++++|+ ++.+|++++.||.|.+|++.
T Consensus      1191 ~~l~s~~--g~v~vwd~~~g~~~~~~~~--~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A         1191 KTLVSAG--GYLKWWNVATGDSSQTFYT--NGTNLKKIHVSPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp             SCEEEES--SSEEEBCSSSCBCCCCCCC--SSCCCCCCEECSSSCCEEEECTTCCEEEECCC
T ss_pred             CEEEECC--CeEEEEECCCCceeeeeec--cCCcccEEEECCCCCEEEEecCCcEEEEEeec
Confidence            9999986  8999999999998877755  68899999999 77899999999999999985

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=2.4e-62  Score=556.43  Aligned_cols=571  Identities=17%  Similarity=0.211  Sum_probs=481.1

Q ss_pred             eeeccCCCCCCceeecCCCCCCceeeecccceeecCCCcccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccc
Q psy15995          3 FATLPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIY   81 (683)
Q Consensus         3 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~   81 (683)
                      ..++.|+|+++.++.. ..++...+|..........+. .+.+.+.+++|||+|++|+++ .++.|.+||+.+++.+..+
T Consensus       618 v~~~~~s~~~~~l~s~-~~d~~i~vw~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~  695 (1249)
T 3sfz_A          618 VYHACFSQDGQRIASC-GADKTLQVFKAETGEKLLDIK-AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTY  695 (1249)
T ss_dssp             EEEEEECTTSSEEEEE-ETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             EEEEEECCCCCEEEEE-eCCCeEEEEECCCCCEEEEec-cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence            3578899999988764 457777787765555444443 467789999999999999988 5789999999999999999


Q ss_pred             cCcccceEEEEECC--CCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEee
Q psy15995         82 TEHSCAVNVAKYSP--SGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASG  159 (683)
Q Consensus        82 ~~h~~~v~~~~~s~--d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  159 (683)
                      .+|...|.+++|+|  ++.++++|+.|+.|++||+.+++.+..+..|.              ..|.+++|+|++++|+++
T Consensus       696 ~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~--------------~~v~~~~~sp~~~~l~s~  761 (1249)
T 3sfz_A          696 DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHT--------------NSVNHCRFSPDDELLASC  761 (1249)
T ss_dssp             ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCS--------------SCEEEEEECSSTTEEEEE
T ss_pred             cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCC--------------CCEEEEEEecCCCEEEEE
Confidence            99999999999999  55689999999999999999998887776665              789999999999999999


Q ss_pred             cCCccEEEEeccccceeeecccc-----------ccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeee-c
Q psy15995        160 DISGKVRIWDTVNKEHILKNEFH-----------PIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS-G  227 (683)
Q Consensus       160 ~~d~~i~iwd~~~~~~~~~~~~~-----------~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~  227 (683)
                      +.||.|++||+.+++........           .....+.+++|+|+++.+++++.+   .+.+|+..++.....+. +
T Consensus       762 s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~---~v~~~d~~~~~~~~~~~~~  838 (1249)
T 3sfz_A          762 SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN---KVLLFDIHTSGLLAEIHTG  838 (1249)
T ss_dssp             ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETT---EEEEEETTTCCEEEEEECS
T ss_pred             ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCC---cEEEEEecCCCceeEEcCC
Confidence            99999999999988655433221           123478899999999999998854   37889999888887766 8


Q ss_pred             CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeE
Q psy15995        228 QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLV  307 (683)
Q Consensus       228 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~  307 (683)
                      |...|.+++|+|+++. +++++.|+.|++||..+++....+.+|...|.+++|+|+++.+++++.||.|++|++.+....
T Consensus       839 ~~~~v~~~~~sp~~~~-l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~  917 (1249)
T 3sfz_A          839 HHSTIQYCDFSPYDHL-AVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKN  917 (1249)
T ss_dssp             SSSCCCEEEECSSTTE-EEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSC
T ss_pred             CCCceEEEEEcCCCCE-EEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcccccee
Confidence            9999999999999995 999999999999999999999999999999999999999999999999999999996532100


Q ss_pred             -----------------------------EeccC------CccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceee
Q psy15995        308 -----------------------------SELGN------PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVS  352 (683)
Q Consensus       308 -----------------------------~~~~~------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  352 (683)
                                                   .....      ..+...+.+++|+|+++++++++.+|.+++||+.+++...
T Consensus       918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~  997 (1249)
T 3sfz_A          918 SAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFS  997 (1249)
T ss_dssp             CSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEE
T ss_pred             eeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceee
Confidence                                         00000      0134579999999999999999999999999999988766


Q ss_pred             EEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        353 EFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                      .+. .+......+.++++++++++++.+|.+++||+..+..  .....|...+.+++++|++ .+++++.||.|++||+.
T Consensus       998 ~~~-~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~ 1073 (1249)
T 3sfz_A          998 SGV-GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDY--VFLQAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVI 1073 (1249)
T ss_dssp             ECC-CCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEE--ECCBCCSSCEEEEEECSSS-EEEEEESSSEEEEEETT
T ss_pred             ecc-cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCce--EEEecCCCcEEEEEEcCCC-cEEEEECCCcEEEEECC
Confidence            543 4556778889999999999999999999999987433  2456799999999999965 67889999999999999


Q ss_pred             CCCcceeccCCCCcceeEEEEe--CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEe
Q psy15995        433 TGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVE  510 (683)
Q Consensus       433 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (683)
                      +++..... ..|...|.++.++  ++.+++++.|+.+++||+.+......                              
T Consensus      1074 ~~~~~~~~-~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~------------------------------ 1122 (1249)
T 3sfz_A         1074 TGRIERDF-TCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHE------------------------------ 1122 (1249)
T ss_dssp             TTCCCEEE-ECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBC------------------------------
T ss_pred             CCceeEEE-cccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeee------------------------------
Confidence            99887766 5688899999988  78999999999999999986542111                              


Q ss_pred             CCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcce--------eecCCcCeeEEEECCCCCEEEEE
Q psy15995        511 NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKA--------ELDHLGPVTDCSFSPSNEYLVAS  582 (683)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--------~~~~~~~v~~~~~s~~~~~l~~~  582 (683)
                            ...+...+.+++++|++++|++++.||.|++||+.+++.....        ...|.+.|++++|+||+++|+++
T Consensus      1123 ------l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~ 1196 (1249)
T 3sfz_A         1123 ------LKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSA 1196 (1249)
T ss_dssp             ------CCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEE
T ss_pred             ------eccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEEC
Confidence                  1124457899999999999999999999999999988766443        13588899999999999999988


Q ss_pred             eCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCC
Q psy15995        583 DAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       583 ~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~  638 (683)
                      +  |.|++||+.+++......  .|...|++++|+||+++|++++.||.|++|++.
T Consensus      1197 ~--g~v~vwd~~~g~~~~~~~--~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A         1197 G--GYLKWWNVATGDSSQTFY--TNGTNLKKIHVSPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp             S--SSEEEBCSSSCBCCCCCC--CSSCCCCCCEECSSSCCEEEECTTCCEEEECCC
T ss_pred             C--CeEEEEECCCCceeeeee--ccCCcccEEEECCCCCEEEEecCCcEEEEEeec
Confidence            6  899999999998875443  388999999999999999999999999999975

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=7.8e-62  Score=512.12  Aligned_cols=548  Identities=14%  Similarity=0.150  Sum_probs=457.3

Q ss_pred             eeccCCCCCCceeecCCCCCCceeeecccc----eeecCCCcccCCC-eEEEeeCC--CCCeEEEe-cCCeEEEEeCCCC
Q psy15995          4 ATLPRTQRGQPIVLGGDPKGKNFLYTNGNK----YIFATLPRTQRGQ-PIVLGGDP--KGKNFLYT-NGNSVIIRNIENP   75 (683)
Q Consensus         4 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~s~--~~~~l~~~-~~~~i~v~~~~~~   75 (683)
                      .++.|+|+++.++..+  .+...++.....    .....+ ..+.+. +.+++|+|  ++++|+++ .++.|++||+.++
T Consensus        22 ~~~~~spdg~~l~~~~--~~~v~v~~~~~~~~~~~~~~~~-~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~   98 (615)
T 1pgu_A           22 THLSYDPTTNAIAYPC--GKSAFVRCLDDGDSKVPPVVQF-TGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFD   98 (615)
T ss_dssp             CCCEEETTTTEEEEEE--TTEEEEEECCSSCCSSCSEEEE-CTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEE
T ss_pred             eEEEECCCCCEEEEec--CCeEEEEECCCCCCccccceEE-ecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCC
Confidence            4678999999988876  455555554332    222222 234567 99999999  99999988 5889999999754


Q ss_pred             --------cccccccCcccceEEEEECCCCcEEEEecCC----CCEEEEeCCCcccccccccccCCCCcccceeeeeecc
Q psy15995         76 --------AISDIYTEHSCAVNVAKYSPSGFYIASGDIS----GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTS  143 (683)
Q Consensus        76 --------~~~~~~~~h~~~v~~~~~s~d~~~las~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (683)
                              +....+.+|...|.+++|+|++++|++++.+    +.|.+||  .++.+..+..|.              ..
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~--------------~~  162 (615)
T 1pgu_A           99 KESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHS--------------QR  162 (615)
T ss_dssp             GGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCS--------------SC
T ss_pred             cccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCC--------------cc
Confidence                    6777888999999999999999999999887    6888888  455555555554              77


Q ss_pred             eeeeEeeccce-EEEeecCCccEEEEeccccceeeeccccccCC---CeeEEEEcCC-CCeEEEEecCCceEEEEEEccC
Q psy15995        144 IRNILVLSIGF-YIASGDISGKVRIWDTVNKEHILKNEFHPIGG---PIKDIAWSPD-NQRMVVVGEGRERFGHVFMSET  218 (683)
Q Consensus       144 i~~~~~s~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~i~~~~~s~~-~~~l~~~~~~~~~~~~~~~~~~  218 (683)
                      +.+++|+|++. .+++++.|+.|++||+.+++.+.  .+..|..   .|.+++|+|+ ++++++++.++.  +.+|+..+
T Consensus       163 v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~--i~vwd~~~  238 (615)
T 1pgu_A          163 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA--SDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK--ISCFDGKS  238 (615)
T ss_dssp             EEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEE--EECSSSCTTCCEEEEEECSTTCCEEEEEETTCC--EEEEETTT
T ss_pred             EEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceee--eecccCCCCceEEEEEECCCCCCEEEEEeCCCe--EEEEECCC
Confidence            99999999998 89999999999999999887654  3455667   8999999999 999999887654  78999999


Q ss_pred             CCceeee-e---cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecccc----ccCeEEEEECCCCCEEEEE
Q psy15995        219 GTSVGEI-S---GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH----SRFVQAVRYSPSGSHFASA  290 (683)
Q Consensus       219 ~~~~~~~-~---~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~  290 (683)
                      ++.+..+ .   .|...|.+++|+ ++.. +++++.|+.|++||+.+++....+..+    ...+.++.|. ++++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~~-l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~  315 (615)
T 1pgu_A          239 GEFLKYIEDDQEPVQGGIFALSWL-DSQK-FATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISL  315 (615)
T ss_dssp             CCEEEECCBTTBCCCSCEEEEEES-SSSE-EEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEE
T ss_pred             CCEeEEecccccccCCceEEEEEc-CCCE-EEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEE
Confidence            9999998 6   899999999999 8774 999999999999999999988888766    4678888885 88899999


Q ss_pred             cCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEec
Q psy15995        291 GFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ  370 (683)
Q Consensus       291 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (683)
                      +.||.|++||+.+++.+..+..  |...|.+++| |+   +++++.||.|++|++.   .+.   ..+......+.+ ++
T Consensus       316 ~~~g~i~~~d~~~~~~~~~~~~--~~~~v~~~~~-~~---l~~~~~dg~i~~w~~~---~~~---~~~~~~v~~~~~-~~  382 (615)
T 1pgu_A          316 SLDGTLNFYELGHDEVLKTISG--HNKGITALTV-NP---LISGSYDGRIMEWSSS---SMH---QDHSNLIVSLDN-SK  382 (615)
T ss_dssp             ETTSCEEEEETTEEEEEEEECC--CSSCEEEEET-TT---TEEEETTSCEEETTTT---EEE---CCCCSCEEEEEC-CS
T ss_pred             ECCCCEEEEECCCCcEEEEEeC--CCCCEEEEEe-cC---cEEECCCCeEEEEEch---hhc---CcccCceEEEEE-CC
Confidence            9999999999999998888865  9999999999 88   9999999999999998   222   445555666666 66


Q ss_pred             CCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeE
Q psy15995        371 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQING  450 (683)
Q Consensus       371 ~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~  450 (683)
                      ++.+++++.++.+++|++.....        ...+.+++++|++..++++ .++.+.+|++.+++......  +...+.+
T Consensus       383 ~~~l~~~~~d~~i~~~~~~~~~~--------~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~  451 (615)
T 1pgu_A          383 AQEYSSISWDDTLKVNGITKHEF--------GSQPKVASANNDGFTAVLT-NDDDLLILQSFTGDIIKSVR--LNSPGSA  451 (615)
T ss_dssp             TTCCEEEETTTEEEETTEEEEEC--------SSCEEEEEECSSSEEEEEE-TTSEEEEEETTTCCEEEEEE--CSSCEEE
T ss_pred             CcEEEEEeCCCCEEEEEcccCcc--------cCCceEEEEcCCCCEEEEe-CCCceEEEeccCCceeeecc--cCCCceE
Confidence            88999999999999999875322        1267889999999888887 88999999998888777664  7888999


Q ss_pred             EEEeCCeEEEEEc-CCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEE
Q psy15995        451 MKATGELLYTCGI-DDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISL  529 (683)
Q Consensus       451 ~~~~~~~l~~~~~-d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  529 (683)
                      +.+.++++++++. |+.+++|++.+.....                                   .....+...+.++++
T Consensus       452 ~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~-----------------------------------~~~~~~~~~v~~~~~  496 (615)
T 1pgu_A          452 VSLSQNYVAVGLEEGNTIQVFKLSDLEVSF-----------------------------------DLKTPLRAKPSYISI  496 (615)
T ss_dssp             EEECSSEEEEEETTTSCEEEEETTEEEEEE-----------------------------------ECSSCCSSCEEEEEE
T ss_pred             EEEcCCEEEEeecCCCeEEEEECCCccccc-----------------------------------cccCCccCceEEEEE
Confidence            9999999999999 9999999998642100                                   111235567899999


Q ss_pred             ccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECC----------CCCEEEEEeCCCeEEEEECCCC-cc
Q psy15995        530 DHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSP----------SNEYLVASDAHRKVVLYRVPDF-EL  598 (683)
Q Consensus       530 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~----------~~~~l~~~~~d~~i~i~~~~~~-~~  598 (683)
                      +|++++|++++.||.|++||+.+++........|...|++++|+|          ++++|++++.|+.|++||+.++ +.
T Consensus       497 s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~  576 (615)
T 1pgu_A          497 SPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKI  576 (615)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCC
T ss_pred             CCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCcee
Confidence            999999999999999999999998876544333899999999999          9999999999999999999987 44


Q ss_pred             ccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCC
Q psy15995        599 AHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLAS  639 (683)
Q Consensus       599 ~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~  639 (683)
                      ....  .+|...|++++|+||++ |++++.||.|++|+++.
T Consensus       577 ~~~~--~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~  614 (615)
T 1pgu_A          577 IKAL--NAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL  614 (615)
T ss_dssp             EEET--TSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred             chhh--hcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence            4333  34999999999999999 99999999999999875

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-59  Score=504.82  Aligned_cols=573  Identities=13%  Similarity=0.117  Sum_probs=414.3

Q ss_pred             cCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC
Q psy15995         82 TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI  161 (683)
Q Consensus        82 ~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  161 (683)
                      .+|...|++++|+|++++||+|+.||+|+|||..+.+...... +              ...|.+++|+| |++|++++.
T Consensus        14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~--------------~~~V~~l~fsp-g~~L~S~s~   77 (902)
T 2oaj_A           14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-D--------------RSAIKEMRFVK-GIYLVVINA   77 (902)
T ss_dssp             EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-S--------------CCCEEEEEEET-TTEEEEEET
T ss_pred             cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-C--------------CCCEEEEEEcC-CCEEEEEEC
Confidence            4899999999999999999999999999999988776544332 1              16799999999 889999999


Q ss_pred             CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCce-----------eeeecCCc
Q psy15995        162 SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSV-----------GEISGQSK  230 (683)
Q Consensus       162 d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~  230 (683)
                      |++|++||+.+++.+....   +.+.|.+++|+|+++++++++.++.  +.+|+.++++..           ..+.+|.+
T Consensus        78 D~~v~lWd~~~~~~~~~~~---~~~~V~~v~~sp~g~~l~sgs~dg~--V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~  152 (902)
T 2oaj_A           78 KDTVYVLSLYSQKVLTTVF---VPGKITSIDTDASLDWMLIGLQNGS--MIVYDIDRDQLSSFKLDNLQKSSFFPAARLS  152 (902)
T ss_dssp             TCEEEEEETTTCSEEEEEE---CSSCEEEEECCTTCSEEEEEETTSC--EEEEETTTTEEEEEEECCHHHHHTCSSSCCC
T ss_pred             cCeEEEEECCCCcEEEEEc---CCCCEEEEEECCCCCEEEEEcCCCc--EEEEECCCCccccceeccccccccccccCCC
Confidence            9999999999988665543   4578999999999999999987765  789998877653           34577999


Q ss_pred             CeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecccc------------------ccCeEEEEECCCCCEEEEEcC
Q psy15995        231 PINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH------------------SRFVQAVRYSPSGSHFASAGF  292 (683)
Q Consensus       231 ~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~~~~~  292 (683)
                      .|.+++|+|++...+++++.|+.| +||+++++....+..|                  ...|.+++|+|+|++|++++.
T Consensus       153 ~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~  231 (902)
T 2oaj_A          153 PIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE  231 (902)
T ss_dssp             CCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET
T ss_pred             CeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC
Confidence            999999999865569999999999 9999999888777655                  577999999999999999999


Q ss_pred             CCcEEEEeCCCCeeEEe--cc---CC-----------ccccCeEEEEEcc----CC-CEEEEEECC-----CcEEEEECC
Q psy15995        293 DGKVFLYDGASADLVSE--LG---NP-----------AHKGGVYAVAWKP----DG-TQLLTASGD-----KTCKLWDIE  346 (683)
Q Consensus       293 dg~i~iw~~~~~~~~~~--~~---~~-----------~~~~~i~~~~~~~----~~-~~l~~~~~d-----g~i~iwd~~  346 (683)
                      ||.|++||+++++.+..  +.   ..           .|...|.+++|++    ++ ..+++++.+     +.+++|++.
T Consensus       232 Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~  311 (902)
T 2oaj_A          232 DNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLG  311 (902)
T ss_dssp             TCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEE
T ss_pred             CCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecC
Confidence            99999999999887653  21   00           1345799999964    43 456777665     378899852


Q ss_pred             ------------------CCceeeEEEecCcceeceEEEEe----------cCCEEEEEecCCcEEEEecCCCCccee--
Q psy15995        347 ------------------TKSVVSEFIMGNQVEDQQVSCLW----------QGDYLLTVSLSGFISYLDVNNPSTPIR--  396 (683)
Q Consensus       347 ------------------~~~~~~~~~~~~~~~~~~~~~~~----------~~~~l~~~~~~g~i~~~~~~~~~~~~~--  396 (683)
                                        +.+....+..........+.+.+          ++..+++++.+|.+++|++..+.....  
T Consensus       312 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~  391 (902)
T 2oaj_A          312 YTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKAS  391 (902)
T ss_dssp             ECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGG
T ss_pred             CCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccc
Confidence                              12222222222222333333322          344789999999999999865421111  


Q ss_pred             ----e----------------------------------eeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcce
Q psy15995        397 ----V----------------------------------IKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDR  438 (683)
Q Consensus       397 ----~----------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~  438 (683)
                          .                                  +.+|...+..++|+|+++.|++|+.|++|++||+.++....
T Consensus       392 ~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~  471 (902)
T 2oaj_A          392 LFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQD  471 (902)
T ss_dssp             GSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTT
T ss_pred             cCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccC
Confidence                1                                  22344444555667899999999999999999998875321


Q ss_pred             e--c--------cCCCCcceeEEEEe--CCeEEEEEcCCeEEEEeCCCCcccCC-------ceecCCCCceeeecCCeEE
Q psy15995        439 V--Q--------GAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLSSNAYSGP-------EVKLGSQPRGLDIDENTLV  499 (683)
Q Consensus       439 ~--~--------~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~  499 (683)
                      .  +        ..+|...|.+++++  +++|++++.|++|++|++.+.+....       ..........+...++...
T Consensus       472 ~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  551 (902)
T 2oaj_A          472 NASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLV  551 (902)
T ss_dssp             TBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEE
T ss_pred             CceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccc
Confidence            0  1        12688899999998  88999999999999999987642111       0000000000000000000


Q ss_pred             EEEeceEEEEe-CCceeeee-cCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcc----ee-ecCCcCeeEEEE
Q psy15995        500 TVTVKQISIVE-NGAKVSSL-PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPK----AE-LDHLGPVTDCSF  572 (683)
Q Consensus       500 ~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~-~~~~~~v~~~~~  572 (683)
                      ....+....+. .......+ .+...|++++|+|+| +||+|+.|++|++||+++...+..    .. .+|...|++++|
T Consensus       552 ~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~F  630 (902)
T 2oaj_A          552 DVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEF  630 (902)
T ss_dssp             ECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEE
T ss_pred             cccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEE
Confidence            00000000000 00112222 267889999999999 999999999999999988765421    12 168889999999


Q ss_pred             C-----CCC---CEEEEEeCCCeEEEEEC---CCCccccccceeee-----cccEEEEE-ec------------------
Q psy15995        573 S-----PSN---EYLVASDAHRKVVLYRV---PDFELAHNKEWGFH-----SAKVNCVA-WS------------------  617 (683)
Q Consensus       573 s-----~~~---~~l~~~~~d~~i~i~~~---~~~~~~~~~~~~~h-----~~~v~~~~-~s------------------  617 (683)
                      +     |||   ++|++++.|++|++||+   .+|+....  +.+|     .++|.+++ |+                  
T Consensus       631 s~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~--~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~  708 (902)
T 2oaj_A          631 VIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQ--LMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLS  708 (902)
T ss_dssp             EEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEE--EEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGG
T ss_pred             EEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEE--ecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccC
Confidence            9     885   89999999999999999   67776533  3334     46777777 65                  


Q ss_pred             ----CCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEE---E------Ec-cCCeEEEeeCCCcEEEEeeccC
Q psy15995        618 ----PDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRL---Q------WL-DNDLLVSVGQDCNTKIWEIAPF  683 (683)
Q Consensus       618 ----~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l---~------~~-~~~~l~s~~~d~~v~vw~~~~~  683 (683)
                          +++.+|+++  +..|++|++.+++...... . |...+.++   .      |+ ++..|++.+.||.|++|+++.+
T Consensus       709 ~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k~~-~-~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l  784 (902)
T 2oaj_A          709 KGLCIPGIVLITG--FDDIRLITLGKSKSTHKGF-K-YPLAATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDF  784 (902)
T ss_dssp             GTCCCCEEEEEEC--SSEEEEECTTCCCEEEEEC-S-SCEEEEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEETTTC
T ss_pred             CCCCCCeEEEEEe--ccceEEEeCccccceeeEc-c-cceeeeEEEEEEeccccccccCceEEEEEeCCCcEEEEECcch
Confidence                455555555  7789999999988876663 3 34666776   5      55 5679999999999999998753

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.6e-57  Score=483.55  Aligned_cols=569  Identities=12%  Similarity=0.112  Sum_probs=423.3

Q ss_pred             ccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccc
Q psy15995         42 TQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHI  120 (683)
Q Consensus        42 ~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~  120 (683)
                      .+.+.+.+++|||++++||++ .++.|+||+..+.+....+ .|..+|++++|+| |++||+++.|++|++||+.+++.+
T Consensus        15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~   92 (902)
T 2oaj_A           15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVL   92 (902)
T ss_dssp             ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEE
T ss_pred             CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEE
Confidence            346789999999999999998 5899999999888776554 4889999999999 889999999999999999998777


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeee---------ccccccCCCeeEE
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILK---------NEFHPIGGPIKDI  191 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~---------~~~~~~~~~i~~~  191 (683)
                      ..+..+               ..|.+++|+|++++|++|+.||.|++||+.+++....         .....|.++|.++
T Consensus        93 ~~~~~~---------------~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl  157 (902)
T 2oaj_A           93 TTVFVP---------------GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSI  157 (902)
T ss_dssp             EEEECS---------------SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEE
T ss_pred             EEEcCC---------------CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEE
Confidence            665421               5789999999999999999999999999998764210         2345678999999


Q ss_pred             EEcCCC-CeEEEEecCCceEEEEEEccCCCceeeeecC------------------CcCeEEEEeecCCCeEEEEeeCCC
Q psy15995        192 AWSPDN-QRMVVVGEGRERFGHVFMSETGTSVGEISGQ------------------SKPINSCDFKPSRPFRIITGSEDN  252 (683)
Q Consensus       192 ~~s~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~~l~~~~~d~  252 (683)
                      +|+|++ ..+++++.++  .+ +|+.++++.+..+..|                  ...|++++|+|++.+ |++++.|+
T Consensus       158 ~~sp~~~~~l~~g~~dg--~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~-lasgs~Dg  233 (902)
T 2oaj_A          158 QWNPRDIGTVLISYEYV--TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH-IITIHEDN  233 (902)
T ss_dssp             EEETTEEEEEEEECSSC--EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE-EEEEETTC
T ss_pred             EEccCCCCEEEEEeCCC--cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE-EEEEECCC
Confidence            999975 5666555443  36 9999998888777665                  578999999999985 99999999


Q ss_pred             eEEEEcCCCCceeee--c---cc-------------cccCeEEEEEC----CCC-CEEEEEcCC-----CcEEEEeCC--
Q psy15995        253 TIAVFEGPPFKFKMT--K---QE-------------HSRFVQAVRYS----PSG-SHFASAGFD-----GKVFLYDGA--  302 (683)
Q Consensus       253 ~i~iw~~~~~~~~~~--~---~~-------------~~~~v~~~~~~----~~~-~~l~~~~~d-----g~i~iw~~~--  302 (683)
                      .|++||.++++.+..  +   ..             |...|.+++|+    |++ ..+++|+.+     ..+.+|++.  
T Consensus       234 ~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~  313 (902)
T 2oaj_A          234 SLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYT  313 (902)
T ss_dssp             CEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEEC
T ss_pred             eEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCC
Confidence            999999998887653  2   11             34579999995    444 467777655     378898842  


Q ss_pred             ----------------CCeeEEeccCCccccCeEEEEEcc----------CCCEEEEEECCCcEEEEECCCCceeeE---
Q psy15995        303 ----------------SADLVSELGNPAHKGGVYAVAWKP----------DGTQLLTASGDKTCKLWDIETKSVVSE---  353 (683)
Q Consensus       303 ----------------~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~l~~~~~dg~i~iwd~~~~~~~~~---  353 (683)
                                      +.+....+.. .+...+.++.+.+          +...+++++.||.|++||+.++.....   
T Consensus       314 ~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~  392 (902)
T 2oaj_A          314 PRYSITSYEGMKNYYANPKQMKIFPL-PTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASL  392 (902)
T ss_dssp             CCGGGCCHHHHHHHHHSCSEEEEECC-SSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGG
T ss_pred             CCccccchhhhhhhhcCccceEEEec-CCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCccccccc
Confidence                            1222333321 2567888888865          344788999999999999977643221   


Q ss_pred             --------------EEe-----------------------cCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcce-
Q psy15995        354 --------------FIM-----------------------GNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPI-  395 (683)
Q Consensus       354 --------------~~~-----------------------~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~-  395 (683)
                                    +..                       ++......+.++|+++.+++++.|+.|++||+..+.... 
T Consensus       393 ~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~  472 (902)
T 2oaj_A          393 FPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDN  472 (902)
T ss_dssp             SCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTT
T ss_pred             CCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCC
Confidence                          000                       001111234456788999999999999999998753210 


Q ss_pred             eee---------eeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCc------------------------------
Q psy15995        396 RVI---------KGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEN------------------------------  436 (683)
Q Consensus       396 ~~~---------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~------------------------------  436 (683)
                      ..+         .+|...|.+++|+|++++||+|+.||+|++||+.+++.                              
T Consensus       473 ~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  552 (902)
T 2oaj_A          473 ASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVD  552 (902)
T ss_dssp             BCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEE
T ss_pred             ceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcccccc
Confidence            111         17889999999999999999999999999999986631                              


Q ss_pred             --------------ceeccCCCCcceeEEEEe--CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEE
Q psy15995        437 --------------DRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVT  500 (683)
Q Consensus       437 --------------~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (683)
                                    ......+|...|.+++++  + +|++++.|++|++||+.+......                    
T Consensus       553 ~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~--------------------  611 (902)
T 2oaj_A          553 VRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYM--------------------  611 (902)
T ss_dssp             CGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEE--------------------
T ss_pred             ccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEE--------------------
Confidence                          011225689999999998  6 999999999999999876432100                    


Q ss_pred             EEeceEEEEeCCceeeee--cCCCCCcEEEEc-----cCC---CEEEEEcCCCcEEEEEc---CCCccCccee----ecC
Q psy15995        501 VTVKQISIVENGAKVSSL--PIDYEPSSISLD-----HEH---GLVAVGGADSKVHIYEL---NNKSLSPKAE----LDH  563 (683)
Q Consensus       501 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~---~~l~~~~~dg~i~i~d~---~~~~~~~~~~----~~~  563 (683)
                                  .....+  .+...|++++|+     ||+   ++|++|+.|++|++||+   .+++....+.    ..+
T Consensus       612 ------------~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~  679 (902)
T 2oaj_A          612 ------------ENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTS  679 (902)
T ss_dssp             ------------EEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCS
T ss_pred             ------------eehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecCC
Confidence                        000011  245668999999     885   89999999999999999   6665443222    123


Q ss_pred             CcCeeEEE-EC----------------------CCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEE---E--
Q psy15995        564 LGPVTDCS-FS----------------------PSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCV---A--  615 (683)
Q Consensus       564 ~~~v~~~~-~s----------------------~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~---~--  615 (683)
                      .++|..++ |+                      +++..|+++  +..++||++.+++..++. +. |...+.++   .  
T Consensus       680 ~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k~-~~-~~~~~~~v~~~~~~  755 (902)
T 2oaj_A          680 KGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKSTHKG-FK-YPLAATGLSYISTV  755 (902)
T ss_dssp             SCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEEEEE-CS-SCEEEEEEEEEEEE
T ss_pred             CCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccceEEEeCccccceeeE-cc-cceeeeEEEEEEec
Confidence            57777776 65                      455555554  778999999998887654 33 55556665   6  


Q ss_pred             ----ecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCC--CCeeEEEEc-cCCeEEEe
Q psy15995        616 ----WSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQ--SQITRLQWL-DNDLLVSV  669 (683)
Q Consensus       616 ----~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~--~~v~~l~~~-~~~~l~s~  669 (683)
                          |++++..|++++.||+|++|++.+.+++..+......  ..+....|+ .++.++-.
T Consensus       756 ~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~  816 (902)
T 2oaj_A          756 EKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSEHIPFPIAAKYITESSVLRNGDIAIRV  816 (902)
T ss_dssp             CSSSCEEEEEEEEEEETTSEEEEEETTTCCEEEEEECSSCCCHHHHTTCEECTTSCEEEEC
T ss_pred             cccccccCceEEEEEeCCCcEEEEECcchHHHhhccCCcccccccccceEEcCCCCEEEEe
Confidence                7889999999999999999999999998877542211  122345566 55544433

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.9e-50  Score=439.26  Aligned_cols=480  Identities=17%  Similarity=0.216  Sum_probs=377.8

Q ss_pred             cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE
Q psy15995         76 AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY  155 (683)
Q Consensus        76 ~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  155 (683)
                      +..+.+.+|.+.|++++|+|+|++||+++.||.|+|||+.+++.+..+..|.              ..|.+++|+|++++
T Consensus         4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~--------------~~v~~~~~s~~~~~   69 (814)
T 3mkq_A            4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTE--------------TPVRAGKFIARKNW   69 (814)
T ss_dssp             CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS--------------SCEEEEEEEGGGTE
T ss_pred             ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCC--------------CcEEEEEEeCCCCE
Confidence            3456788999999999999999999999999999999999998888877665              78999999999999


Q ss_pred             EEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCC-CceeeeecCCcCeEE
Q psy15995        156 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG-TSVGEISGQSKPINS  234 (683)
Q Consensus       156 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~  234 (683)
                      |++++.||.|++||+.+++.+.  .+..|.+.|.+++|+|+++++++++.++.  +.+|+++++ .....+.+|...|.+
T Consensus        70 l~~~~~dg~i~vw~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--i~vw~~~~~~~~~~~~~~~~~~v~~  145 (814)
T 3mkq_A           70 IIVGSDDFRIRVFNYNTGEKVV--DFEAHPDYIRSIAVHPTKPYVLSGSDDLT--VKLWNWENNWALEQTFEGHEHFVMC  145 (814)
T ss_dssp             EEEEETTSEEEEEETTTCCEEE--EEECCSSCEEEEEECSSSSEEEEEETTSE--EEEEEGGGTSEEEEEEECCSSCEEE
T ss_pred             EEEEeCCCeEEEEECCCCcEEE--EEecCCCCEEEEEEeCCCCEEEEEcCCCE--EEEEECCCCceEEEEEcCCCCcEEE
Confidence            9999999999999999988654  44567899999999999999998887654  789999887 667788999999999


Q ss_pred             EEeec-CCCeEEEEeeCCCeEEEEcCCCCceeeeccccc-cCeEEEEECC--CCCEEEEEcCCCcEEEEeCCCCeeEEec
Q psy15995        235 CDFKP-SRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS-RFVQAVRYSP--SGSHFASAGFDGKVFLYDGASADLVSEL  310 (683)
Q Consensus       235 ~~~~~-~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~  310 (683)
                      ++|+| ++. .+++++.||.|++||+.+++....+..+. ..+.+++|+|  +++++++++.||.|++||..+++.+..+
T Consensus       146 ~~~~p~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~  224 (814)
T 3mkq_A          146 VAFNPKDPS-TFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL  224 (814)
T ss_dssp             EEEETTEEE-EEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred             EEEEcCCCC-EEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEE
Confidence            99999 555 59999999999999998888777776554 8899999999  9999999999999999999999998888


Q ss_pred             cCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCC
Q psy15995        311 GNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN  390 (683)
Q Consensus       311 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~  390 (683)
                      ..  |...|.+++|+|+++++++++.||.|++||+.+++....+                                    
T Consensus       225 ~~--~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~------------------------------------  266 (814)
T 3mkq_A          225 EG--HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL------------------------------------  266 (814)
T ss_dssp             EC--CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEE------------------------------------
T ss_pred             cC--CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe------------------------------------
Confidence            65  8899999999999999999999999999999987665433                                    


Q ss_pred             CCcceeeeeeccccEEEEEEeCCCCE-EEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCe---
Q psy15995        391 PSTPIRVIKGHNKPITALALSPDRGT-VFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDT---  466 (683)
Q Consensus       391 ~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~---  466 (683)
                              ..|...+.+++|+|++.. +++++.++.+.+|++.......           .+...+..+++++.+..   
T Consensus       267 --------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~g~~~~~~~~~~~~~~  327 (814)
T 3mkq_A          267 --------NVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTL-----------SLDPVGKLVWSGGKNAAASD  327 (814)
T ss_dssp             --------CCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCE-----------EECSSSEEEEECCTTSCTTC
T ss_pred             --------ecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCcee-----------EECCCCCEEEECccccccee
Confidence                    446678888999998763 2444456678888876543321           22222344444433321   


Q ss_pred             EEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEE
Q psy15995        467 IKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVH  546 (683)
Q Consensus       467 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~  546 (683)
                      +....+.............                          ............+.+++++|+++++++++ ++.+.
T Consensus       328 ~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~  380 (814)
T 3mkq_A          328 IFTAVIRGNEEVEQDEPLS--------------------------LQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYV  380 (814)
T ss_dssp             EEEEECCSCCCCCSSSCBC--------------------------CCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEE
T ss_pred             eeeeecccccccccCccce--------------------------eeeecCCCCccCCceeEECCCCCEEEEec-CCEEE
Confidence            1111111000000000000                          00011122445689999999999999998 89999


Q ss_pred             EEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCC---CeE
Q psy15995        547 IYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDS---ALV  623 (683)
Q Consensus       547 i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~---~~l  623 (683)
                      +|++.....      .+.+.+.+++|+|+++++++++.++.+++|+.          +.+|...+.+++|+||+   ++|
T Consensus       381 i~~~~~~~~------~~~~~i~~~~~spdg~~la~~~~~g~v~l~~~----------~~~~~~~v~~~~~s~dg~~~~~l  444 (814)
T 3mkq_A          381 IYTALAWRN------KAFGKCQDFVWGPDSNSYALIDETGQIKYYKN----------FKEVTSWSVPMHSAIDRLFSGAL  444 (814)
T ss_dssp             EEETTTTEE------EEEEECSEEEECTTSSCEEEECTTCCEEEEET----------TEECTTCCCCCSSCCCEEECSSS
T ss_pred             EEECccccc------cCCCceEEEEEeCCCCeEEEEeCCCcEEEEEC----------CCCccceEEcCCcCccceecceE
Confidence            999754332      24567899999999999999999999999962          12377889999999998   689


Q ss_pred             EEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCCeEEEe------eCCCcEEEEe
Q psy15995        624 ASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSV------GQDCNTKIWE  679 (683)
Q Consensus       624 ~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~------~~d~~v~vw~  679 (683)
                      ++++.|+.|++||+.+++.+..+..  |..   .++|+ ++++|+++      +.|..+.+|.
T Consensus       445 ~~~~~d~~v~~~d~~~~~~~~~~~~--~~~---~v~~s~dg~~la~~~~~~~~~~~~~~~~~~  502 (814)
T 3mkq_A          445 LGVKSDGFVYFFDWDNGTLVRRIDV--NAK---DVIWSDNGELVMIVNTNSNGDEASGYTLLF  502 (814)
T ss_dssp             EEEEETTEEEEECTTTCCEEEEESS--CEE---EEEECTTSSEEEEEECCCSSCSCSEEEEEE
T ss_pred             EEEecCCEEEEEECCcCcEEEEEec--CCC---EEEEcCCCCEEEEEEcCcccCCceEEEEEe
Confidence            9999999999999999988877754  332   99999 77899998      6666555553

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.2e-50  Score=440.75  Aligned_cols=464  Identities=17%  Similarity=0.175  Sum_probs=379.4

Q ss_pred             ccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccc
Q psy15995         42 TQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHI  120 (683)
Q Consensus        42 ~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~  120 (683)
                      .+.+.+.+++|||+|++|+++ .+|.|.|||+.+++.+..+.+|..+|++++|+|++++||+++.||.|++||+.+++.+
T Consensus        11 ~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~   90 (814)
T 3mkq_A           11 NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV   90 (814)
T ss_dssp             EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE
T ss_pred             cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence            356789999999999999988 5789999999999999999999999999999999999999999999999999999888


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcC-CCCe
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSP-DNQR  199 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~  199 (683)
                      ..+..|.              ..+.+++|+|++++|++++.||.|++||+.++.. ....+..|...|.+++|+| +++.
T Consensus        91 ~~~~~~~--------------~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~-~~~~~~~~~~~v~~~~~~p~~~~~  155 (814)
T 3mkq_A           91 VDFEAHP--------------DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA-LEQTFEGHEHFVMCVAFNPKDPST  155 (814)
T ss_dssp             EEEECCS--------------SCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE-EEEEEECCSSCEEEEEEETTEEEE
T ss_pred             EEEecCC--------------CCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce-EEEEEcCCCCcEEEEEEEcCCCCE
Confidence            8776665              7799999999999999999999999999988633 2344566789999999999 7888


Q ss_pred             EEEEecCCceEEEEEEccCCCceeeeecCC-cCeEEEEeec--CCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeE
Q psy15995        200 MVVVGEGRERFGHVFMSETGTSVGEISGQS-KPINSCDFKP--SRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQ  276 (683)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~  276 (683)
                      +++++.++.  +.+|+...+.....+..+. ..+.+++|+|  +++. +++++.||.|++||..+++....+.+|...|.
T Consensus       156 l~~~~~dg~--v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~  232 (814)
T 3mkq_A          156 FASGCLDRT--VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY-MITASDDLTIKIWDYQTKSCVATLEGHMSNVS  232 (814)
T ss_dssp             EEEEETTSE--EEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCE-EEEECTTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred             EEEEeCCCe--EEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCE-EEEEeCCCEEEEEECCCCcEEEEEcCCCCCEE
Confidence            888887654  7889988888877777665 8999999999  8885 99999999999999999999999999999999


Q ss_pred             EEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCE-EEEEECCCcEEEEECCCCceeeEEE
Q psy15995        277 AVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQ-LLTASGDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       277 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~  355 (683)
                      +++|+|+++++++++.||.|++||+.+++....+..  +...+.+++|+|+++. +++++.++.+.+|++......    
T Consensus       233 ~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  306 (814)
T 3mkq_A          233 FAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV--GLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPT----  306 (814)
T ss_dssp             EEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECC--SSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCC----
T ss_pred             EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeec--CCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCce----
Confidence            999999999999999999999999999999988876  8889999999999874 355555777999998765432    


Q ss_pred             ecCcceeceEEEEecCCEEEEEecCCc---EEE------EecCCCC---cceeeeeeccccEEEEEEeCCCCEEEEEeCC
Q psy15995        356 MGNQVEDQQVSCLWQGDYLLTVSLSGF---ISY------LDVNNPS---TPIRVIKGHNKPITALALSPDRGTVFTGSHD  423 (683)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~l~~~~~~g~---i~~------~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  423 (683)
                               ..+.+++..+++++.+..   +..      |++....   ........+...+.+++|+|+|+++++++ +
T Consensus       307 ---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~  376 (814)
T 3mkq_A          307 ---------LSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-D  376 (814)
T ss_dssp             ---------EEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-T
T ss_pred             ---------eEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-C
Confidence                     334456666666554432   111      1111111   12233455667889999999999999988 8


Q ss_pred             CcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEe
Q psy15995        424 GFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTV  503 (683)
Q Consensus       424 g~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (683)
                      +.+.+|++.......                                                                 
T Consensus       377 ~~~~i~~~~~~~~~~-----------------------------------------------------------------  391 (814)
T 3mkq_A          377 GEYVIYTALAWRNKA-----------------------------------------------------------------  391 (814)
T ss_dssp             TEEEEEETTTTEEEE-----------------------------------------------------------------
T ss_pred             CEEEEEECccccccC-----------------------------------------------------------------
Confidence            999999964221100                                                                 


Q ss_pred             ceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCC---CEEE
Q psy15995        504 KQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSN---EYLV  580 (683)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~  580 (683)
                                       ...+.+++|+|+++++++++.+|.|++|+..         .+|...+.+++|+|++   .+|+
T Consensus       392 -----------------~~~i~~~~~spdg~~la~~~~~g~v~l~~~~---------~~~~~~v~~~~~s~dg~~~~~l~  445 (814)
T 3mkq_A          392 -----------------FGKCQDFVWGPDSNSYALIDETGQIKYYKNF---------KEVTSWSVPMHSAIDRLFSGALL  445 (814)
T ss_dssp             -----------------EEECSEEEECTTSSCEEEECTTCCEEEEETT---------EECTTCCCCCSSCCCEEECSSSE
T ss_pred             -----------------CCceEEEEEeCCCCeEEEEeCCCcEEEEECC---------CCccceEEcCCcCccceecceEE
Confidence                             0135789999999999999999999999622         2466778899999998   6889


Q ss_pred             EEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEe------ecCCcEEEE
Q psy15995        581 ASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASG------SLDTTIIIW  635 (683)
Q Consensus       581 ~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~------~~d~~v~iw  635 (683)
                      +++.|+.|++||+.+++.+.....  |..   .++|+|||++|+++      +.++.+.+|
T Consensus       446 ~~~~d~~v~~~d~~~~~~~~~~~~--~~~---~v~~s~dg~~la~~~~~~~~~~~~~~~~~  501 (814)
T 3mkq_A          446 GVKSDGFVYFFDWDNGTLVRRIDV--NAK---DVIWSDNGELVMIVNTNSNGDEASGYTLL  501 (814)
T ss_dssp             EEEETTEEEEECTTTCCEEEEESS--CEE---EEEECTTSSEEEEEECCCSSCSCSEEEEE
T ss_pred             EEecCCEEEEEECCcCcEEEEEec--CCC---EEEEcCCCCEEEEEEcCcccCCceEEEEE
Confidence            999999999999999887655432  332   89999999999999      555544444

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=2.4e-44  Score=346.16  Aligned_cols=293  Identities=20%  Similarity=0.352  Sum_probs=261.4

Q ss_pred             cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE
Q psy15995         76 AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY  155 (683)
Q Consensus        76 ~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  155 (683)
                      +...++.+|.+.|++++|+||+++|++|+.||+|+|||+.+++.+..+..+.              ..+.+++|+|++++
T Consensus        46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~--------------~~v~~~~~s~~~~~  111 (340)
T 1got_B           46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRS--------------SWVMTCAYAPSGNY  111 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSS--------------SCEEEEEECTTSSE
T ss_pred             hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCC--------------ccEEEEEECCCCCE
Confidence            4456789999999999999999999999999999999999998877776665              67899999999999


Q ss_pred             EEeecCCccEEEEeccccce--eeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeE
Q psy15995        156 IASGDISGKVRIWDTVNKEH--ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPIN  233 (683)
Q Consensus       156 l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  233 (683)
                      |++++.|+.+++||+.+++.  .....+..|.+.|.++.|++++. +++++.++.  +.+|+.++++.+..+.+|...|.
T Consensus       112 l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~--i~~wd~~~~~~~~~~~~h~~~v~  188 (340)
T 1got_B          112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTT--CALWDIETGQQTTTFTGHTGDVM  188 (340)
T ss_dssp             EEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSC--EEEEETTTTEEEEEECCCSSCEE
T ss_pred             EEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCc--EEEEECCCCcEEEEEcCCCCceE
Confidence            99999999999999987542  23345667889999999999886 566665543  78999999999999999999999


Q ss_pred             EEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC
Q psy15995        234 SCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP  313 (683)
Q Consensus       234 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~  313 (683)
                      +++|+|++++ +++++.|+.|++||+++++....+.+|...|.+++|+|++++|++++.||.|++||+++++.+..+...
T Consensus       189 ~~~~~~~~~~-l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~  267 (340)
T 1got_B          189 SLSLAPDTRL-FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD  267 (340)
T ss_dssp             EEEECTTSSE-EEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT
T ss_pred             EEEECCCCCE-EEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccC
Confidence            9999999985 999999999999999999999999999999999999999999999999999999999999888777644


Q ss_pred             ccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCc
Q psy15995        314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPST  393 (683)
Q Consensus       314 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~  393 (683)
                      .+...|.+++|+|++++|++++.|+.|++||+.+++.+.                                         
T Consensus       268 ~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~-----------------------------------------  306 (340)
T 1got_B          268 NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG-----------------------------------------  306 (340)
T ss_dssp             TCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-----------------------------------------
T ss_pred             CcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEee-----------------------------------------
Confidence            455689999999999999999999999999998766433                                         


Q ss_pred             ceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEc
Q psy15995        394 PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN  430 (683)
Q Consensus       394 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~  430 (683)
                         .+.+|...|.+++|+|++.+|++|+.|+.|++||
T Consensus       307 ---~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          307 ---VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             ---EEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             ---EeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence               3467999999999999999999999999999997

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=1.5e-44  Score=356.65  Aligned_cols=290  Identities=20%  Similarity=0.337  Sum_probs=265.4

Q ss_pred             cccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEE
Q psy15995         78 SDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIA  157 (683)
Q Consensus        78 ~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  157 (683)
                      ...+.+|.++|++++|+|++++||+|+.||+|+|||+.+++....+..|.              ..|.+++|+|++++|+
T Consensus       101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~--------------~~V~~v~~~~~~~~l~  166 (410)
T 1vyh_C          101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT--------------DSVQDISFDHSGKLLA  166 (410)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCS--------------SCEEEEEECTTSSEEE
T ss_pred             eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccC--------------CcEEEEEEcCCCCEEE
Confidence            45688999999999999999999999999999999999998888777765              7899999999999999


Q ss_pred             eecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEe
Q psy15995        158 SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDF  237 (683)
Q Consensus       158 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  237 (683)
                      +|+.|++|++||+.+++.+  ..+..|...|.+++|+|+++++++++.++.  +.+|+..++..+..+.+|...|.++.|
T Consensus       167 sgs~D~~i~iwd~~~~~~~--~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~--i~~wd~~~~~~~~~~~~h~~~v~~~~~  242 (410)
T 1vyh_C          167 SCSADMTIKLWDFQGFECI--RTMHGHDHNVSSVSIMPNGDHIVSASRDKT--IKMWEVQTGYCVKTFTGHREWVRMVRP  242 (410)
T ss_dssp             EEETTSCCCEEETTSSCEE--ECCCCCSSCEEEEEECSSSSEEEEEETTSE--EEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred             EEeCCCeEEEEeCCCCcee--EEEcCCCCCEEEEEEeCCCCEEEEEeCCCe--EEEEECCCCcEEEEEeCCCccEEEEEE
Confidence            9999999999999988754  445678899999999999999999887754  789999999999999999999999999


Q ss_pred             ecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCC--------------------CCEEEEEcCCCcEE
Q psy15995        238 KPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPS--------------------GSHFASAGFDGKVF  297 (683)
Q Consensus       238 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~dg~i~  297 (683)
                      +|++.. +++++.|++|++||+.+++....+.+|...|.+++|+|+                    +.+|++|+.|+.|+
T Consensus       243 ~~~g~~-l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~  321 (410)
T 1vyh_C          243 NQDGTL-IASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK  321 (410)
T ss_dssp             CTTSSE-EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEE
T ss_pred             CCCCCE-EEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEE
Confidence            999995 999999999999999999999999999999999999996                    67899999999999


Q ss_pred             EEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEE
Q psy15995        298 LYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTV  377 (683)
Q Consensus       298 iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  377 (683)
                      +||+.++..+..+..  |...|.+++|+|++++|++++.|+.|++||+.+++.+.                         
T Consensus       322 iwd~~~~~~~~~~~~--h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~-------------------------  374 (410)
T 1vyh_C          322 MWDVSTGMCLMTLVG--HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK-------------------------  374 (410)
T ss_dssp             EEETTTTEEEEEEEC--CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCE-------------------------
T ss_pred             EEECCCCceEEEEEC--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEE-------------------------
Confidence            999999999988875  99999999999999999999999999999998765443                         


Q ss_pred             ecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        378 SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       378 ~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                                         .+.+|...|++++|+|++++|++|+.||.|++|+++
T Consensus       375 -------------------~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r  410 (410)
T 1vyh_C          375 -------------------TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR  410 (410)
T ss_dssp             -------------------EEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred             -------------------EEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence                               346789999999999999999999999999999863

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.4e-44  Score=340.90  Aligned_cols=291  Identities=21%  Similarity=0.334  Sum_probs=258.1

Q ss_pred             ccccccCcccceEEEEECCC----CcEEEEecCCCCEEEEeCCCccccc--ccccccCCCCcccceeeeeecceeeeEee
Q psy15995         77 ISDIYTEHSCAVNVAKYSPS----GFYIASGDISGKVRIWDTVNKEHIL--KNEFHPIGGPIKDIGTLLSLTSIRNILVL  150 (683)
Q Consensus        77 ~~~~~~~h~~~v~~~~~s~d----~~~las~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  150 (683)
                      ..+.+++|.+.|++++|+|+    +++||||+.|++|+|||+.+++...  .+..|.              ..|.+++++
T Consensus        24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~--------------~~v~~~~~~   89 (321)
T 3ow8_A           24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQ--------------LGVVSVDIS   89 (321)
T ss_dssp             EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCS--------------SCEEEEEEC
T ss_pred             eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCC--------------CCEEEEEEC
Confidence            34567799999999999985    6799999999999999997765432  333443              679999999


Q ss_pred             ccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCc
Q psy15995        151 SIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSK  230 (683)
Q Consensus       151 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (683)
                      +++.++++++.|++|++||+.+++.+..  +..+...+.+++|+|+++++++++.++.  +.+|+.++++....+..|..
T Consensus        90 ~~~~~l~s~s~D~~i~lWd~~~~~~~~~--~~~~~~~~~~~~~spdg~~l~~g~~dg~--v~i~~~~~~~~~~~~~~~~~  165 (321)
T 3ow8_A           90 HTLPIAASSSLDAHIRLWDLENGKQIKS--IDAGPVDAWTLAFSPDSQYLATGTHVGK--VNIFGVESGKKEYSLDTRGK  165 (321)
T ss_dssp             SSSSEEEEEETTSEEEEEETTTTEEEEE--EECCTTCCCCEEECTTSSEEEEECTTSE--EEEEETTTCSEEEEEECSSS
T ss_pred             CCCCEEEEEeCCCcEEEEECCCCCEEEE--EeCCCccEEEEEECCCCCEEEEEcCCCc--EEEEEcCCCceeEEecCCCc
Confidence            9999999999999999999999876543  4455678999999999999999877654  78999999999999999999


Q ss_pred             CeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEec
Q psy15995        231 PINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL  310 (683)
Q Consensus       231 ~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~  310 (683)
                      .|.+++|+|++++ |++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+
T Consensus       166 ~v~~~~~spdg~~-lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~  244 (321)
T 3ow8_A          166 FILSIAYSPDGKY-LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL  244 (321)
T ss_dssp             CEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred             eEEEEEECCCCCE-EEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEE
Confidence            9999999999996 999999999999999999999999999999999999999999999999999999999999998888


Q ss_pred             cCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCC
Q psy15995        311 GNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN  390 (683)
Q Consensus       311 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~  390 (683)
                      ..  |...|.+++|+|++++|++++.|+.|++||+.+++.+..                                     
T Consensus       245 ~~--h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~-------------------------------------  285 (321)
T 3ow8_A          245 SG--HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHT-------------------------------------  285 (321)
T ss_dssp             CC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE-------------------------------------
T ss_pred             cC--CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEE-------------------------------------
Confidence            65  999999999999999999999999999999998766543                                     


Q ss_pred             CCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        391 PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       391 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                             +.+|...|.+++|+|++++|++++.||.|++||..
T Consensus       286 -------~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          286 -------FFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             -------ECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             -------EcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence                   45688999999999999999999999999999963

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=5.4e-44  Score=352.62  Aligned_cols=284  Identities=17%  Similarity=0.258  Sum_probs=262.2

Q ss_pred             ccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccc
Q psy15995         42 TQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHI  120 (683)
Q Consensus        42 ~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~  120 (683)
                      .+.+.+.+++|+|++++|+++ .++.|+|||+++++....+.+|.+.|++++|+|++++||+|+.|++|++||+.+++.+
T Consensus       106 gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~  185 (410)
T 1vyh_C          106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI  185 (410)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE
T ss_pred             ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence            356789999999999999988 5899999999999999999999999999999999999999999999999999999888


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeE
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRM  200 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  200 (683)
                      ..+..|.              ..|.+++|+|++.+|++++.|++|++||+.+++.+.  .+..|...|.+++|+|+++++
T Consensus       186 ~~~~~h~--------------~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~g~~l  249 (410)
T 1vyh_C          186 RTMHGHD--------------HNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVK--TFTGHREWVRMVRPNQDGTLI  249 (410)
T ss_dssp             ECCCCCS--------------SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE--EEECCSSCEEEEEECTTSSEE
T ss_pred             EEEcCCC--------------CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE--EEeCCCccEEEEEECCCCCEE
Confidence            8777665              679999999999999999999999999999987653  456778999999999999999


Q ss_pred             EEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecC--------------------CCeEEEEeeCCCeEEEEcCC
Q psy15995        201 VVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPS--------------------RPFRIITGSEDNTIAVFEGP  260 (683)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~~l~~~~~d~~i~iw~~~  260 (683)
                      ++++.++.  +.+|+..+++....+.+|...|.+++|+|+                    ++ .+++|+.|+.|++||+.
T Consensus       250 ~s~s~D~~--v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~  326 (410)
T 1vyh_C          250 ASCSNDQT--VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVS  326 (410)
T ss_dssp             EEEETTSC--EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETT
T ss_pred             EEEcCCCe--EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECC
Confidence            99987765  789999999999999999999999999996                    44 59999999999999999


Q ss_pred             CCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcE
Q psy15995        261 PFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTC  340 (683)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i  340 (683)
                      +++.+..+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+..  |...|.+++|+|++.+|++++.||.|
T Consensus       327 ~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~sgs~D~~i  404 (410)
T 1vyh_C          327 TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA--HEHFVTSLDFHKTAPYVVTGSVDQTV  404 (410)
T ss_dssp             TTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC--CSSCEEEEEECSSSSCEEEEETTSEE
T ss_pred             CCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC--CCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence            9999999999999999999999999999999999999999999998888865  99999999999999999999999999


Q ss_pred             EEEECC
Q psy15995        341 KLWDIE  346 (683)
Q Consensus       341 ~iwd~~  346 (683)
                      ++|+++
T Consensus       405 ~vW~~r  410 (410)
T 1vyh_C          405 KVWECR  410 (410)
T ss_dssp             EEEC--
T ss_pred             EEEeCC
Confidence            999863

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=4.1e-43  Score=338.83  Aligned_cols=294  Identities=21%  Similarity=0.304  Sum_probs=260.0

Q ss_pred             cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE
Q psy15995         76 AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY  155 (683)
Q Consensus        76 ~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  155 (683)
                      +....+.+|.+.|++++|+||+++||||+.||+|+|||..+++....+..+.              ..+.+++|+|+|.+
T Consensus        55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~--------------~~v~~~~~sp~g~~  120 (354)
T 2pbi_B           55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPC--------------TWVMACAYAPSGCA  120 (354)
T ss_dssp             CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS--------------SCCCEEEECTTSSE
T ss_pred             EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCC--------------CCEEEEEECCCCCE
Confidence            4456789999999999999999999999999999999999887766655543              67899999999999


Q ss_pred             EEeecCCccEEEEeccccce----eeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcC
Q psy15995        156 IASGDISGKVRIWDTVNKEH----ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKP  231 (683)
Q Consensus       156 l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (683)
                      |++++.|+.+++|++.....    .....+..|.+.|.+++|+|+++.+++++.++.  +.+|+.++++.+..+.+|...
T Consensus       121 lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~--v~lwd~~~~~~~~~~~~h~~~  198 (354)
T 2pbi_B          121 IACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGT--CALWDVESGQLLQSFHGHGAD  198 (354)
T ss_dssp             EEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSE--EEEEETTTCCEEEEEECCSSC
T ss_pred             EEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCc--EEEEeCCCCeEEEEEcCCCCC
Confidence            99999999999999865321    122345568899999999999999999887754  789999999999999999999


Q ss_pred             eEEEEeecC--CCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEe
Q psy15995        232 INSCDFKPS--RPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSE  309 (683)
Q Consensus       232 v~~~~~~~~--~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~  309 (683)
                      |.+++|+|+  +. .+++++.||.|++||+++++....+..|...|.+++|+|++++|++++.|++|++||++.++.+..
T Consensus       199 v~~~~~~~~~~g~-~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~  277 (354)
T 2pbi_B          199 VLCLDLAPSETGN-TFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAI  277 (354)
T ss_dssp             EEEEEECCCSSCC-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             eEEEEEEeCCCCC-EEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence            999999885  45 599999999999999999999999999999999999999999999999999999999999888777


Q ss_pred             ccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecC
Q psy15995        310 LGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVN  389 (683)
Q Consensus       310 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~  389 (683)
                      +....+...+.+++|+|++++|++++.|+.|++||+.+++.+.                                     
T Consensus       278 ~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~-------------------------------------  320 (354)
T 2pbi_B          278 YSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVS-------------------------------------  320 (354)
T ss_dssp             ECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE-------------------------------------
T ss_pred             EcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEE-------------------------------------
Confidence            6643455688999999999999999999999999998776543                                     


Q ss_pred             CCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEc
Q psy15995        390 NPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN  430 (683)
Q Consensus       390 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~  430 (683)
                             .+.+|...|++++|+|++++|++|+.|+.|++|+
T Consensus       321 -------~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          321 -------ILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             -------EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             -------EEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence                   3457999999999999999999999999999996

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.3e-43  Score=335.24  Aligned_cols=286  Identities=20%  Similarity=0.320  Sum_probs=257.5

Q ss_pred             CcccCCCeEEEeeCCC----CCeEEEe-cCCeEEEEeCCCCcc--cccccCcccceEEEEECCCCcEEEEecCCCCEEEE
Q psy15995         40 PRTQRGQPIVLGGDPK----GKNFLYT-NGNSVIIRNIENPAI--SDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIW  112 (683)
Q Consensus        40 ~~~~~~~~~~~~~s~~----~~~l~~~-~~~~i~v~~~~~~~~--~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iw  112 (683)
                      ...+.+.+.+++|+|+    +++|+++ .|+.|+|||+.+++.  ...+.+|...|.+++|+++++++++++.|++|++|
T Consensus        28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lW  107 (321)
T 3ow8_A           28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW  107 (321)
T ss_dssp             TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred             cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence            3467889999999985    5678877 689999999987753  44688999999999999999999999999999999


Q ss_pred             eCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEE
Q psy15995        113 DTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIA  192 (683)
Q Consensus       113 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~  192 (683)
                      |+.+++.+..+..++              ..+.+++|+|++++|++++.||.|++||+.+++...  .+..+...+.+++
T Consensus       108 d~~~~~~~~~~~~~~--------------~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~--~~~~~~~~v~~~~  171 (321)
T 3ow8_A          108 DLENGKQIKSIDAGP--------------VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEY--SLDTRGKFILSIA  171 (321)
T ss_dssp             ETTTTEEEEEEECCT--------------TCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEE--EEECSSSCEEEEE
T ss_pred             ECCCCCEEEEEeCCC--------------ccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeE--EecCCCceEEEEE
Confidence            999998887776554              567889999999999999999999999999887553  4455668899999


Q ss_pred             EcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccc
Q psy15995        193 WSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS  272 (683)
Q Consensus       193 ~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~  272 (683)
                      |+|+++++++++.++.  +.+|+..+++.+..+.+|..+|.+++|+|++++ |++++.|+.|++||+++++....+.+|.
T Consensus       172 ~spdg~~lasg~~dg~--i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~h~  248 (321)
T 3ow8_A          172 YSPDGKYLASGAIDGI--INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL-LVTASDDGYIKIYDVQHANLAGTLSGHA  248 (321)
T ss_dssp             ECTTSSEEEEEETTSC--EEEEETTTTEEEEEECCCSSCCCEEEECTTSCE-EEEECTTSCEEEEETTTCCEEEEECCCS
T ss_pred             ECCCCCEEEEEcCCCe--EEEEECCCCcEEEEEcccCCceeEEEEcCCCCE-EEEEcCCCeEEEEECCCcceeEEEcCCC
Confidence            9999999999987764  789999999999999999999999999999995 9999999999999999999999999999


Q ss_pred             cCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECC
Q psy15995        273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIE  346 (683)
Q Consensus       273 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~  346 (683)
                      ..|.+++|+|++++|++++.|+.|++||+.+++++..+..  |...|.+++|+|++++|++++.||.|++||..
T Consensus       249 ~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~--h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          249 SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD--HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC--CCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            9999999999999999999999999999999999999875  99999999999999999999999999999963

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=1e-43  Score=343.13  Aligned_cols=324  Identities=15%  Similarity=0.155  Sum_probs=239.6

Q ss_pred             EEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecC------CCCEEEEeCCCcccccc
Q psy15995         49 VLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDI------SGKVRIWDTVNKEHILK  122 (683)
Q Consensus        49 ~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~------dg~i~iwd~~~~~~~~~  122 (683)
                      -+.+.+++.++....+.....|+++...+    ..|+..|++++|||||++||+++.      |+.|++|+..++.....
T Consensus        10 g~d~g~~~~~~~~~g~~~~~~w~~p~~~p----~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~   85 (357)
T 4g56_B           10 GVDLGTENLYFQSNGSSKGSAWGRPVTAP----ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNES   85 (357)
T ss_dssp             ----------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGG
T ss_pred             CCCCCccceEEecCCCccccccCCCCCCc----ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCccee
Confidence            35567777777776677889999865443    479999999999999999999997      67799999887755433


Q ss_pred             cccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeec--cccccCCCeeEEEEcCCCCeE
Q psy15995        123 NEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKN--EFHPIGGPIKDIAWSPDNQRM  200 (683)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~i~~~~~s~~~~~l  200 (683)
                      +...          ...+...|.+++|+|++++| +++.||+|++||+.+++.....  ....|...|.+++|+|++++|
T Consensus        86 ~~~~----------~~~~~~~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l  154 (357)
T 4g56_B           86 LCTA----------GVQTEAGVTDVAWVSEKGIL-VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQA  154 (357)
T ss_dssp             GCSE----------EEECSSCEEEEEEETTTEEE-EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEE
T ss_pred             Eecc----------cCCCCCCEEEEEEcCCCCEE-EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEE
Confidence            3221          12233679999999999765 5677999999999988755433  344678999999999999999


Q ss_pred             EEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeec--cccccCeEEE
Q psy15995        201 VVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK--QEHSRFVQAV  278 (683)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~--~~~~~~v~~~  278 (683)
                      ++++.++.  +.+|+.++++.+..+.+|...|++++|+|+++.++++++.|+.|++||+++++....+  ..|...+.++
T Consensus       155 ~sgs~dg~--v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v  232 (357)
T 4g56_B          155 VSGGKDFS--VKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSV  232 (357)
T ss_dssp             EEEETTSC--EEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEE
T ss_pred             EEEeCCCe--EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccch
Confidence            99887765  7899999999999999999999999999998767999999999999999988876654  4567789999


Q ss_pred             EECCCC-CEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCC-CEEEEEECCCcEEEEECCCCceeeEEEe
Q psy15995        279 RYSPSG-SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDG-TQLLTASGDKTCKLWDIETKSVVSEFIM  356 (683)
Q Consensus       279 ~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~  356 (683)
                      +|+|++ .+|++|+.|+.|++||+++++.+..+..  |...|.+++|+|++ ++|++++.|+.|++||+++++.+.    
T Consensus       233 ~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~--~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~----  306 (357)
T 4g56_B          233 TWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV--HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFR----  306 (357)
T ss_dssp             EECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC--CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEE----
T ss_pred             hhhhcccceEEEeecccceeEEECCCCcEeEEEec--cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE----
Confidence            999975 5889999999999999999999888865  99999999999987 578999999999999998776432    


Q ss_pred             cCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeC-CCCEEEEEeCCCcEEEEcCCCCC
Q psy15995        357 GNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSP-DRGTVFTGSHDGFITRWNAKTGE  435 (683)
Q Consensus       357 ~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~w~~~~~~  435 (683)
                                                               ..+|...|++++|+| ++++|++++.||.|++|++.+..
T Consensus       307 -----------------------------------------~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~  345 (357)
T 4g56_B          307 -----------------------------------------DLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG  345 (357)
T ss_dssp             -----------------------------------------ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred             -----------------------------------------ECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence                                                     135899999999998 78999999999999999997654


Q ss_pred             c
Q psy15995        436 N  436 (683)
Q Consensus       436 ~  436 (683)
                      .
T Consensus       346 ~  346 (357)
T 4g56_B          346 R  346 (357)
T ss_dssp             -
T ss_pred             c
Confidence            3

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=7.9e-43  Score=335.61  Aligned_cols=295  Identities=17%  Similarity=0.288  Sum_probs=251.7

Q ss_pred             CceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEE
Q psy15995        262 FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCK  341 (683)
Q Consensus       262 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  341 (683)
                      .+....+.+|...|.+++|+|++++|++++.||.|++||..+++.+..+..  |...|.+++|+|++++|++++.|+.++
T Consensus        45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~d~~v~  122 (340)
T 1got_B           45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGNYVACGGLDNICS  122 (340)
T ss_dssp             CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC--SSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred             chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeec--CCccEEEEEECCCCCEEEEEeCCCeEE
Confidence            345677889999999999999999999999999999999999998888865  899999999999999999999999999


Q ss_pred             EEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEe
Q psy15995        342 LWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS  421 (683)
Q Consensus       342 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  421 (683)
                      +|++.+.....                                        .....+.+|...|.++.|++++. +++++
T Consensus       123 iw~~~~~~~~~----------------------------------------~~~~~~~~h~~~v~~~~~~~~~~-l~s~s  161 (340)
T 1got_B          123 IYNLKTREGNV----------------------------------------RVSRELAGHTGYLSCCRFLDDNQ-IVTSS  161 (340)
T ss_dssp             EEETTTCSBSC----------------------------------------EEEEEEECCSSCEEEEEEEETTE-EEEEE
T ss_pred             EEECccCCCcc----------------------------------------eeEEEecCCCccEEEEEECCCCc-EEEEE
Confidence            99998754211                                        11244677999999999998864 88999


Q ss_pred             CCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEE
Q psy15995        422 HDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTV  501 (683)
Q Consensus       422 ~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (683)
                      .|+.|++||+.+++....+ .+|                                                         
T Consensus       162 ~d~~i~~wd~~~~~~~~~~-~~h---------------------------------------------------------  183 (340)
T 1got_B          162 GDTTCALWDIETGQQTTTF-TGH---------------------------------------------------------  183 (340)
T ss_dssp             TTSCEEEEETTTTEEEEEE-CCC---------------------------------------------------------
T ss_pred             CCCcEEEEECCCCcEEEEE-cCC---------------------------------------------------------
Confidence            9999999999887654443 122                                                         


Q ss_pred             EeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEE
Q psy15995        502 TVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVA  581 (683)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~  581 (683)
                                         ...+.+++++|+++++++|+.|+.|++||+.++..... ..+|...|++++|+|++++|++
T Consensus       184 -------------------~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~-~~~h~~~v~~v~~~p~~~~l~s  243 (340)
T 1got_B          184 -------------------TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT-FTGHESDINAICFFPNGNAFAT  243 (340)
T ss_dssp             -------------------SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE-ECCCSSCEEEEEECTTSSEEEE
T ss_pred             -------------------CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE-EcCCcCCEEEEEEcCCCCEEEE
Confidence                               23467788999999999999999999999988766533 3468899999999999999999


Q ss_pred             EeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc
Q psy15995        582 SDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL  661 (683)
Q Consensus       582 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~  661 (683)
                      ++.|++|++||+.+++.........+...|++++|+|++++|++|+.|+.|++||+.+++....+..  |...|++++|+
T Consensus       244 ~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~--h~~~v~~~~~s  321 (340)
T 1got_B          244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG--HDNRVSCLGVT  321 (340)
T ss_dssp             EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEEC
T ss_pred             EcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeec--CCCcEEEEEEc
Confidence            9999999999999887654433222345799999999999999999999999999999988887765  78999999999


Q ss_pred             -cCCeEEEeeCCCcEEEEe
Q psy15995        662 -DNDLLVSVGQDCNTKIWE  679 (683)
Q Consensus       662 -~~~~l~s~~~d~~v~vw~  679 (683)
                       ++.+|+|++.|+.|++|+
T Consensus       322 ~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          322 DDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             TTSSCEEEEETTSCEEEEC
T ss_pred             CCCCEEEEEcCCccEEecC
Confidence             778999999999999996

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1.7e-44  Score=352.75  Aligned_cols=317  Identities=19%  Similarity=0.302  Sum_probs=269.9

Q ss_pred             cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeec
Q psy15995         63 NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLT  142 (683)
Q Consensus        63 ~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (683)
                      .+..+..|+..+....++|.+|.+.|++++|+|++++||||+.||+|+|||+.+++....+..|.              .
T Consensus        44 ~~~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~--------------~  109 (380)
T 3iz6_a           44 QGRTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHC--------------P  109 (380)
T ss_dssp             HGGGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCC--------------T
T ss_pred             ccccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCC--------------C
Confidence            44556678888888888999999999999999999999999999999999999998887777665              6


Q ss_pred             ceeeeEeeccceEEEeecCCccEEEEeccccc-----eeeeccccccCCCeeEEEEcCCC-CeEEEEecCCceEEEEEEc
Q psy15995        143 SIRNILVLSIGFYIASGDISGKVRIWDTVNKE-----HILKNEFHPIGGPIKDIAWSPDN-QRMVVVGEGRERFGHVFMS  216 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~~~~~~~~~~~~  216 (683)
                      .|.+++|+|+|++||+++.|+.+++||+.+..     ......+.+|.+.+.++.|+|++ ..+++++.++.  +.+|+.
T Consensus       110 ~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~--i~~wd~  187 (380)
T 3iz6_a          110 WVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQT--CVLWDV  187 (380)
T ss_dssp             TCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSC--EEEECT
T ss_pred             CEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCc--EEEEEc
Confidence            78999999999999999999999999997532     22234466788999999999975 45777766544  789999


Q ss_pred             cCCCceeee-----ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC-CCceeeeccccccCeEEEEECCCCCEEEEE
Q psy15995        217 ETGTSVGEI-----SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP-PFKFKMTKQEHSRFVQAVRYSPSGSHFASA  290 (683)
Q Consensus       217 ~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  290 (683)
                      .+++.+..+     .+|...|.+++|++.+...+++|+.|++|++||++ ..+....+.+|...|.+++|+|++++|+++
T Consensus       188 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~  267 (380)
T 3iz6_a          188 TTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTG  267 (380)
T ss_dssp             TTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEE
T ss_pred             CCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEE
Confidence            999888776     67999999999988444469999999999999987 557778889999999999999999999999


Q ss_pred             cCCCcEEEEeCCCCeeEEeccCCc-----cccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceE
Q psy15995        291 GFDGKVFLYDGASADLVSELGNPA-----HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQV  365 (683)
Q Consensus       291 ~~dg~i~iw~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  365 (683)
                      +.||+|++||+++++.+..+....     +...|.+++|+|++++|++++.||.|++||+..++....+.          
T Consensus       268 s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~----------  337 (380)
T 3iz6_a          268 SDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLG----------  337 (380)
T ss_dssp             CSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEEC----------
T ss_pred             cCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEe----------
Confidence            999999999999999887765421     22348999999999999999999999999998877654431          


Q ss_pred             EEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCC
Q psy15995        366 SCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE  435 (683)
Q Consensus       366 ~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~  435 (683)
                                                    ....+|...|++++|+|++++|++|+.|+.|++|++...+
T Consensus       338 ------------------------------~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~  377 (380)
T 3iz6_a          338 ------------------------------TLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR  377 (380)
T ss_dssp             ------------------------------CSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred             ------------------------------cccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence                                          1124689999999999999999999999999999987654

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=2.6e-42  Score=326.25  Aligned_cols=292  Identities=16%  Similarity=0.215  Sum_probs=247.6

Q ss_pred             ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEE
Q psy15995        263 KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKL  342 (683)
Q Consensus       263 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  342 (683)
                      +....+.+|.+.|.+++|+|++++|++++.||.|++||+.+++.+..+..  |..+|.+++|+|++++|++++.|+.|++
T Consensus         4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~d~~i~v   81 (304)
T 2ynn_A            4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQV--TETPVRAGKFIARKNWIIVGSDDFRIRV   81 (304)
T ss_dssp             CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred             eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeec--cCCcEEEEEEeCCCCEEEEECCCCEEEE
Confidence            44667889999999999999999999999999999999999999888875  8999999999999999999999999999


Q ss_pred             EECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeC
Q psy15995        343 WDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSH  422 (683)
Q Consensus       343 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  422 (683)
                      ||+.+++.+.                                            .+.+|...|.+++|+|++++|++++.
T Consensus        82 wd~~~~~~~~--------------------------------------------~~~~h~~~v~~~~~~~~~~~l~sgs~  117 (304)
T 2ynn_A           82 FNYNTGEKVV--------------------------------------------DFEAHPDYIRSIAVHPTKPYVLSGSD  117 (304)
T ss_dssp             EETTTCCEEE--------------------------------------------EEECCSSCEEEEEECSSSSEEEEEET
T ss_pred             EECCCCcEEE--------------------------------------------EEeCCCCcEEEEEEcCCCCEEEEECC
Confidence            9999876543                                            34679999999999999999999999


Q ss_pred             CCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEE
Q psy15995        423 DGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVT  502 (683)
Q Consensus       423 dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (683)
                      |+.|++||++++........+|.                                                         
T Consensus       118 D~~v~lWd~~~~~~~~~~~~~h~---------------------------------------------------------  140 (304)
T 2ynn_A          118 DLTVKLWNWENNWALEQTFEGHE---------------------------------------------------------  140 (304)
T ss_dssp             TSCEEEEEGGGTTEEEEEECCCC---------------------------------------------------------
T ss_pred             CCeEEEEECCCCcchhhhhcccC---------------------------------------------------------
Confidence            99999999876543322222222                                                         


Q ss_pred             eceEEEEeCCceeeeecCCCCCcEEEEcc-CCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECC--CCCEE
Q psy15995        503 VKQISIVENGAKVSSLPIDYEPSSISLDH-EHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSP--SNEYL  579 (683)
Q Consensus       503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l  579 (683)
                                         ..+.+++|+| ++.+|++|+.|+.|++||+...........++...+..++|+|  ++++|
T Consensus       141 -------------------~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l  201 (304)
T 2ynn_A          141 -------------------HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM  201 (304)
T ss_dssp             -------------------SCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEE
T ss_pred             -------------------CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEE
Confidence                               3467788888 5788999999999999999877666555556778899999987  78899


Q ss_pred             EEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEE
Q psy15995        580 VASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQ  659 (683)
Q Consensus       580 ~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~  659 (683)
                      ++++.|++|++||+.+++.+..  +.+|...|.+++|+|++++|++|+.||+|++||+.+++....+..  |...+.+++
T Consensus       202 ~s~s~D~~i~iWd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~--~~~~~~~~~  277 (304)
T 2ynn_A          202 ITASDDLTIKIWDYQTKSCVAT--LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV--GLERSWCIA  277 (304)
T ss_dssp             EEEETTSEEEEEETTTTEEEEE--EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC--SSSSEEEEE
T ss_pred             EEEcCCCeEEEEeCCCCcccee--eCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccC--CCccEEEEE
Confidence            9999999999999999887643  445999999999999999999999999999999999998888865  678999999


Q ss_pred             Ec-cCC--eEEEeeCCCcEEEEeec
Q psy15995        660 WL-DND--LLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       660 ~~-~~~--~l~s~~~d~~v~vw~~~  681 (683)
                      |. ++.  ++++++.|| +.+|++.
T Consensus       278 ~~~~~~~~~~asg~~~g-~~~~~~~  301 (304)
T 2ynn_A          278 THPTGRKNYIASGFDNG-FTVLSLG  301 (304)
T ss_dssp             ECTTCGGGCEEEEETTE-EEEEECC
T ss_pred             ECCCCCceEEEEecCCc-eEEEEec
Confidence            88 443  466666555 7778765

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=3.2e-42  Score=325.61  Aligned_cols=293  Identities=18%  Similarity=0.258  Sum_probs=253.1

Q ss_pred             cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE
Q psy15995         76 AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY  155 (683)
Q Consensus        76 ~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  155 (683)
                      +..++|.+|.+.|++++|+||+++||+++.||+|++||+.+++.+..+..+.              ..+.+++|+|++++
T Consensus         4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~   69 (304)
T 2ynn_A            4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTE--------------TPVRAGKFIARKNW   69 (304)
T ss_dssp             CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS--------------SCEEEEEEEGGGTE
T ss_pred             eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccC--------------CcEEEEEEeCCCCE
Confidence            4456789999999999999999999999999999999999998887776665              67899999999999


Q ss_pred             EEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC-ceeeeecCCcCeEE
Q psy15995        156 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT-SVGEISGQSKPINS  234 (683)
Q Consensus       156 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~  234 (683)
                      |++|+.|++|++||+.+++.+  ..+..|...|.+++|+|+++++++++.++.  +.+|+++++. ....+.+|...|.+
T Consensus        70 l~s~s~d~~i~vwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~--v~lWd~~~~~~~~~~~~~h~~~v~~  145 (304)
T 2ynn_A           70 IIVGSDDFRIRVFNYNTGEKV--VDFEAHPDYIRSIAVHPTKPYVLSGSDDLT--VKLWNWENNWALEQTFEGHEHFVMC  145 (304)
T ss_dssp             EEEEETTSEEEEEETTTCCEE--EEEECCSSCEEEEEECSSSSEEEEEETTSC--EEEEEGGGTTEEEEEECCCCSCEEE
T ss_pred             EEEECCCCEEEEEECCCCcEE--EEEeCCCCcEEEEEEcCCCCEEEEECCCCe--EEEEECCCCcchhhhhcccCCcEEE
Confidence            999999999999999998865  345678899999999999999999887765  7899998874 45678899999999


Q ss_pred             EEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc-ccccCeEEEEECC--CCCEEEEEcCCCcEEEEeCCCCeeEEecc
Q psy15995        235 CDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ-EHSRFVQAVRYSP--SGSHFASAGFDGKVFLYDGASADLVSELG  311 (683)
Q Consensus       235 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  311 (683)
                      ++|+|.+...+++++.|++|++||+...+....+. +|...+..+.|+|  ++++|++++.|+.|++||+++++++..+.
T Consensus       146 v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~  225 (304)
T 2ynn_A          146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE  225 (304)
T ss_dssp             EEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             EEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC
Confidence            99999654469999999999999998777655554 5667899999987  67899999999999999999999999987


Q ss_pred             CCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCC
Q psy15995        312 NPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP  391 (683)
Q Consensus       312 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~  391 (683)
                      .  |...|.+++|+|++++|++++.||.|++||+.+++....                                      
T Consensus       226 ~--h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~--------------------------------------  265 (304)
T 2ynn_A          226 G--HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT--------------------------------------  265 (304)
T ss_dssp             C--CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE--------------------------------------
T ss_pred             C--CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeee--------------------------------------
Confidence            6  999999999999999999999999999999998776544                                      


Q ss_pred             CcceeeeeeccccEEEEEEeCCCC--EEEEEeCCCcEEEEcCCC
Q psy15995        392 STPIRVIKGHNKPITALALSPDRG--TVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       392 ~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~~w~~~~  433 (683)
                            +..|...+.+++++|++.  ++++|+.|| +.+|++..
T Consensus       266 ------~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~  302 (304)
T 2ynn_A          266 ------LNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN  302 (304)
T ss_dssp             ------ECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred             ------ccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence                  345778899999999875  477776554 77777654

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=2.7e-42  Score=329.77  Aligned_cols=311  Identities=14%  Similarity=0.093  Sum_probs=244.0

Q ss_pred             EEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeee
Q psy15995         68 IIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNI  147 (683)
Q Consensus        68 ~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  147 (683)
                      +.|++.....    ..|...|.+++|+|||++|++++ |+++++||............+   ..........+...|.++
T Consensus        17 r~w~~~~~~~----~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~   88 (344)
T 4gqb_B           17 REWNLPPNAP----ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAP---NEGFCSAGVQTEAGVADL   88 (344)
T ss_dssp             ------CCSC----SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTT---CGGGCSEEEEESSCEEEE
T ss_pred             cccCCCCCCc----ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccC---CcceeeeeeccCCCEEEE
Confidence            5677655433    35777899999999999999887 778999974321100000000   000111223344679999


Q ss_pred             EeeccceEEEeecCCccEEEEeccccceeee--ccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeee
Q psy15995        148 LVLSIGFYIASGDISGKVRIWDTVNKEHILK--NEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEI  225 (683)
Q Consensus       148 ~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  225 (683)
                      +|+|++ .|++++.||+|+|||+.+++.+..  ....+|.+.|.+++|+|++++|++++.++.  +.+|+.++++.+..+
T Consensus        89 ~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~--i~iwd~~~~~~~~~~  165 (344)
T 4gqb_B           89 TWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDIC--IKVWDLAQQVVLSSY  165 (344)
T ss_dssp             EEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSC--EEEEETTTTEEEEEE
T ss_pred             EEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCe--EEEEECCCCcEEEEE
Confidence            999996 677999999999999999876543  335578899999999999999999987765  799999999999999


Q ss_pred             ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc--ccccCeEEEEECCC-CCEEEEEcCCCcEEEEeCC
Q psy15995        226 SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ--EHSRFVQAVRYSPS-GSHFASAGFDGKVFLYDGA  302 (683)
Q Consensus       226 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~  302 (683)
                      .+|...|.+++|+|++..++++++.|++|++||+++++....+.  .|...+.+++|+|+ +++|++|+.||.|++||++
T Consensus       166 ~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~  245 (344)
T 4gqb_B          166 RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK  245 (344)
T ss_dssp             CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred             cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence            99999999999999997678999999999999999998877764  45667999999995 5688999999999999999


Q ss_pred             CCeeEEeccCCccccCeEEEEEccCC-CEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCC
Q psy15995        303 SADLVSELGNPAHKGGVYAVAWKPDG-TQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSG  381 (683)
Q Consensus       303 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g  381 (683)
                      +++.+..+..  |...|.+++|+|++ ++|++++.|+.|++||+++++..                              
T Consensus       246 ~~~~~~~~~~--h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~------------------------------  293 (344)
T 4gqb_B          246 STSCVLSSAV--HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF------------------------------  293 (344)
T ss_dssp             C--CCEEEEC--CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE------------------------------
T ss_pred             CCcEEEEEcC--CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE------------------------------
Confidence            9999988876  99999999999997 57899999999999999876532                              


Q ss_pred             cEEEEecCCCCcceeeeeeccccEEEEEEeCCCC-EEEEEeCCCcEEEEcCCCCCc
Q psy15995        382 FISYLDVNNPSTPIRVIKGHNKPITALALSPDRG-TVFTGSHDGFITRWNAKTGEN  436 (683)
Q Consensus       382 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~w~~~~~~~  436 (683)
                                     .+.+|.+.|++++|+|+++ +|++++.|++|++|++.+...
T Consensus       294 ---------------~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~  334 (344)
T 4gqb_B          294 ---------------RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL  334 (344)
T ss_dssp             ---------------EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred             ---------------EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence                           2357999999999999986 567899999999999987543

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=1.9e-42  Score=334.40  Aligned_cols=294  Identities=19%  Similarity=0.253  Sum_probs=235.8

Q ss_pred             CCcccCCCeEEEeeCCCCCeEEEec-------CCeEEEEeCCCCccccc----ccCcccceEEEEECCCCcEEEEecCCC
Q psy15995         39 LPRTQRGQPIVLGGDPKGKNFLYTN-------GNSVIIRNIENPAISDI----YTEHSCAVNVAKYSPSGFYIASGDISG  107 (683)
Q Consensus        39 ~~~~~~~~~~~~~~s~~~~~l~~~~-------~~~i~v~~~~~~~~~~~----~~~h~~~v~~~~~s~d~~~las~~~dg  107 (683)
                      .|..++..+.+++|||||++||+++       ++.|.+|+..++.....    ..+|...|++++|+|++++| +++.||
T Consensus        37 ~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~dg  115 (357)
T 4g56_B           37 APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDSG  115 (357)
T ss_dssp             ---CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETTS
T ss_pred             CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECCC
Confidence            3556788999999999999999985       57899999887765433    34789999999999998655 567899


Q ss_pred             CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCC
Q psy15995        108 KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGP  187 (683)
Q Consensus       108 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  187 (683)
                      +|+|||+.+++.........          ..+...|.+++|+|++++|++++.|+.|++||+.+++.+.  .+..|...
T Consensus       116 ~v~lWd~~~~~~~~~~~~~~----------~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~--~~~~h~~~  183 (357)
T 4g56_B          116 AVELWEILEKESLLVNKFAK----------YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLK--SYNAHSSE  183 (357)
T ss_dssp             CEEEC--------CCCCEEE----------CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEE--EECCCSSC
T ss_pred             EEEEeeccccceeEEEeecc----------CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE--EEcCCCCC
Confidence            99999999886554433211          1123679999999999999999999999999999987654  45667899


Q ss_pred             eeEEEEcCCCC-eEEEEecCCceEEEEEEccCCCceeeee--cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce
Q psy15995        188 IKDIAWSPDNQ-RMVVVGEGRERFGHVFMSETGTSVGEIS--GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF  264 (683)
Q Consensus       188 i~~~~~s~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  264 (683)
                      |.+++|+|++. .+++++.++.  +.+|+.++++....+.  .|...+.+++|+|++..++++|+.|+.|++||+++++.
T Consensus       184 v~~v~~s~~~~~~~~s~~~dg~--v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~  261 (357)
T 4g56_B          184 VNCVAACPGKDTIFLSCGEDGR--ILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS  261 (357)
T ss_dssp             EEEEEECTTCSSCEEEEETTSC--EEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG
T ss_pred             EEEEEEccCCCceeeeeccCCc--eEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE
Confidence            99999999986 5666665543  7888888888776654  56778999999998776799999999999999999999


Q ss_pred             eeeccccccCeEEEEECCCC-CEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc-CCCEEEEEECCCcEEE
Q psy15995        265 KMTKQEHSRFVQAVRYSPSG-SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP-DGTQLLTASGDKTCKL  342 (683)
Q Consensus       265 ~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i  342 (683)
                      ...+.+|...|++++|+|++ ++|++++.|++|++||+++++.+..+.   |...|.+++|+| ++++|++++.||.|++
T Consensus       262 ~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~---H~~~V~~vafsP~d~~~l~s~s~Dg~v~i  338 (357)
T 4g56_B          262 AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLS---HRDFVTGVAWSPLDHSKFTTVGWDHKVLH  338 (357)
T ss_dssp             CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECC---CSSCEEEEEECSSSTTEEEEEETTSCEEE
T ss_pred             eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECC---CCCCEEEEEEeCCCCCEEEEEcCCCeEEE
Confidence            99999999999999999987 578999999999999999998887763   999999999998 7999999999999999


Q ss_pred             EECCCCce
Q psy15995        343 WDIETKSV  350 (683)
Q Consensus       343 wd~~~~~~  350 (683)
                      |++.....
T Consensus       339 W~~~~~~~  346 (357)
T 4g56_B          339 HHLPSEGR  346 (357)
T ss_dssp             EECC----
T ss_pred             EECCCCCc
Confidence            99976543

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=6e-42  Score=330.70  Aligned_cols=297  Identities=18%  Similarity=0.275  Sum_probs=249.4

Q ss_pred             ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEE
Q psy15995        263 KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKL  342 (683)
Q Consensus       263 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  342 (683)
                      +....+.+|...|.+++|+|++++|++++.||+|++||..+++....+..  |...|.+++|+|+++.+++++.|+.+++
T Consensus        55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~--~~~~v~~~~~sp~g~~lasg~~d~~i~v  132 (354)
T 2pbi_B           55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM--PCTWVMACAYAPSGCAIACGGLDNKCSV  132 (354)
T ss_dssp             CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--SSSCCCEEEECTTSSEEEEESTTSEEEE
T ss_pred             EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEec--CCCCEEEEEECCCCCEEEEeeCCCCEEE
Confidence            45667889999999999999999999999999999999999988888765  8889999999999999999999999999


Q ss_pred             EECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeC
Q psy15995        343 WDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSH  422 (683)
Q Consensus       343 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  422 (683)
                      |++.......                                      .......+.+|...|.+++|+|++..|++++.
T Consensus       133 ~~~~~~~~~~--------------------------------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~  174 (354)
T 2pbi_B          133 YPLTFDKNEN--------------------------------------MAAKKKSVAMHTNYLSACSFTNSDMQILTASG  174 (354)
T ss_dssp             EECCCCTTCC--------------------------------------SGGGCEEEEECSSCEEEEEECSSSSEEEEEET
T ss_pred             EEEecccccc--------------------------------------ccccceeeeccCCcEEEEEEeCCCCEEEEEeC
Confidence            9987543110                                      01223456789999999999999999999999


Q ss_pred             CCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEE
Q psy15995        423 DGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVT  502 (683)
Q Consensus       423 dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (683)
                      |++|++||+.+++....+ .+|..                                                        
T Consensus       175 D~~v~lwd~~~~~~~~~~-~~h~~--------------------------------------------------------  197 (354)
T 2pbi_B          175 DGTCALWDVESGQLLQSF-HGHGA--------------------------------------------------------  197 (354)
T ss_dssp             TSEEEEEETTTCCEEEEE-ECCSS--------------------------------------------------------
T ss_pred             CCcEEEEeCCCCeEEEEE-cCCCC--------------------------------------------------------
Confidence            999999999887765444 22333                                                        


Q ss_pred             eceEEEEeCCceeeeecCCCCCcEEEEcc--CCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEE
Q psy15995        503 VKQISIVENGAKVSSLPIDYEPSSISLDH--EHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLV  580 (683)
Q Consensus       503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  580 (683)
                                          .+.+++++|  ++++|++|+.||.|++||+.+++.... ...|...|++++|+|++++|+
T Consensus       198 --------------------~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~-~~~h~~~v~~v~~~p~~~~l~  256 (354)
T 2pbi_B          198 --------------------DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA-FETHESDVNSVRYYPSGDAFA  256 (354)
T ss_dssp             --------------------CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEE-ECCCSSCEEEEEECTTSSEEE
T ss_pred             --------------------CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEE-ecCCCCCeEEEEEeCCCCEEE
Confidence                                345556655  567899999999999999988876533 345889999999999999999


Q ss_pred             EEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEE
Q psy15995        581 ASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQW  660 (683)
Q Consensus       581 ~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~  660 (683)
                      +++.|++|++||+.+++.........+...+++++|+|++++|++++.|+.|++||+.+++....+..  |...|++++|
T Consensus       257 s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~--h~~~v~~l~~  334 (354)
T 2pbi_B          257 SGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG--HENRVSTLRV  334 (354)
T ss_dssp             EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC--CSSCEEEEEE
T ss_pred             EEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEEC--CCCcEEEEEE
Confidence            99999999999999876554332222345789999999999999999999999999999988877755  7899999999


Q ss_pred             c-cCCeEEEeeCCCcEEEEe
Q psy15995        661 L-DNDLLVSVGQDCNTKIWE  679 (683)
Q Consensus       661 ~-~~~~l~s~~~d~~v~vw~  679 (683)
                      + ++++|++++.|+.|++|+
T Consensus       335 spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          335 SPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             CTTSSCEEEEETTSEEEEEC
T ss_pred             CCCCCEEEEEcCCCCEEecC
Confidence            9 778999999999999996

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.5e-42  Score=334.20  Aligned_cols=314  Identities=19%  Similarity=0.330  Sum_probs=250.7

Q ss_pred             cccccccCccc-ceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccce
Q psy15995         76 AISDIYTEHSC-AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF  154 (683)
Q Consensus        76 ~~~~~~~~h~~-~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  154 (683)
                      +++.++.+|.. .|.+++|+|||++||+|+.|++|+|||+.+++........           ..+...|.+++|+|+++
T Consensus         6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~-----------~~h~~~v~~~~~sp~g~   74 (345)
T 3fm0_A            6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLS-----------EGHQRTVRKVAWSPCGN   74 (345)
T ss_dssp             EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEEC-----------SSCSSCEEEEEECTTSS
T ss_pred             EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeec-----------cccCCcEEEEEECCCCC
Confidence            45677889988 9999999999999999999999999999877543221110           01226799999999999


Q ss_pred             EEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC---ceeeeecCCcC
Q psy15995        155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT---SVGEISGQSKP  231 (683)
Q Consensus       155 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  231 (683)
                      +||+++.|+++++||+..+.......+.+|...|.+++|+|++++|++++.++.  +.+|+.+.+.   .+..+.+|...
T Consensus        75 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~--v~iwd~~~~~~~~~~~~~~~h~~~  152 (345)
T 3fm0_A           75 YLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKS--VWVWEVDEEDEYECVSVLNSHTQD  152 (345)
T ss_dssp             EEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--EEEEEECTTSCEEEEEEECCCCSC
T ss_pred             EEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCe--EEEEECCCCCCeEEEEEecCcCCC
Confidence            999999999999999988765455667788999999999999999999988764  7888887654   35667899999


Q ss_pred             eEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc--eeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC-----
Q psy15995        232 INSCDFKPSRPFRIITGSEDNTIAVFEGPPFK--FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA-----  304 (683)
Q Consensus       232 v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-----  304 (683)
                      |.+++|+|++++ |++++.|+.|++||...++  ....+.+|...|.+++|+|++++|++++.|++|++|+....     
T Consensus       153 v~~~~~~p~~~~-l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~  231 (345)
T 3fm0_A          153 VKHVVWHPSQEL-LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQG  231 (345)
T ss_dssp             EEEEEECSSSSC-EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTC
T ss_pred             eEEEEECCCCCE-EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCcc
Confidence            999999999995 9999999999999988775  44678899999999999999999999999999999986321     


Q ss_pred             ----------eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEE
Q psy15995        305 ----------DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL  374 (683)
Q Consensus       305 ----------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  374 (683)
                                +++..+.. .|...|.+++|+|++..|++++.|+.+++|+...+......         ..         
T Consensus       232 ~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~---------~~---------  292 (345)
T 3fm0_A          232 VACSGSDPSWKCICTLSG-FHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQP---------TF---------  292 (345)
T ss_dssp             CCCC---CEEEEEEEECS-SCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSC---------CE---------
T ss_pred             ceeeccCCccceeEEecC-CCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCccee---------eE---------
Confidence                      22233321 37889999999999999999999999999998765321100         00         


Q ss_pred             EEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCCccee
Q psy15995        375 LTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR-GTVFTGSHDGFITRWNAKTGENDRV  439 (683)
Q Consensus       375 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~  439 (683)
                                       ........+|...|++++|+|++ .+|++++.||.|++|++.+.+....
T Consensus       293 -----------------~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~  341 (345)
T 3fm0_A          293 -----------------SLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH  341 (345)
T ss_dssp             -----------------EEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred             -----------------EEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence                             00012235789999999999987 5999999999999999988775443

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=7.6e-42  Score=329.22  Aligned_cols=307  Identities=21%  Similarity=0.332  Sum_probs=238.9

Q ss_pred             CceeeeecCCc-CeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee---eeccccccCeEEEEECCCCCEEEEEcCCCc
Q psy15995        220 TSVGEISGQSK-PINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK---MTKQEHSRFVQAVRYSPSGSHFASAGFDGK  295 (683)
Q Consensus       220 ~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  295 (683)
                      +.+..+.+|.. .|.+++|+|+++. |++++.|++|++||..+++..   ....+|...|.+++|+|++++|++++.|+.
T Consensus         6 ~~~~~~~~h~~~~v~~l~~sp~g~~-las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~   84 (345)
T 3fm0_A            6 VLLGRVPAHPDSRCWFLAWNPAGTL-LASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT   84 (345)
T ss_dssp             EEEEEECCSTTSCEEEEEECTTSSC-EEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             EEeeeecCCCCCcEEEEEECCCCCE-EEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence            35667889988 9999999999995 999999999999998877543   233689999999999999999999999999


Q ss_pred             EEEEeCCCCe--eEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCE
Q psy15995        296 VFLYDGASAD--LVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDY  373 (683)
Q Consensus       296 i~iw~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (683)
                      +++|+...+.  .+..+..  |...|.+++|+|++++|++++.|+.|++||+..+.....                    
T Consensus        85 v~iw~~~~~~~~~~~~~~~--h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~--------------------  142 (345)
T 3fm0_A           85 TCIWKKNQDDFECVTTLEG--HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC--------------------  142 (345)
T ss_dssp             EEEEEECCC-EEEEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEE--------------------
T ss_pred             EEEEEccCCCeEEEEEccC--CCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEE--------------------
Confidence            9999988764  4555544  999999999999999999999999999999987643211                    


Q ss_pred             EEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCccee-ccCCCCcceeEEE
Q psy15995        374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRV-QGAGHGNQINGMK  452 (683)
Q Consensus       374 l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~-~~~~~~~~v~~~~  452 (683)
                                           +..+.+|...|.+++|+|++++|++++.|+.|++||..+++.... ...+|        
T Consensus       143 ---------------------~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h--------  193 (345)
T 3fm0_A          143 ---------------------VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGH--------  193 (345)
T ss_dssp             ---------------------EEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCC--------
T ss_pred             ---------------------EEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCC--------
Confidence                                 234567899999999999999999999999999999765532211 11222        


Q ss_pred             EeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccC
Q psy15995        453 ATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHE  532 (683)
Q Consensus       453 ~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  532 (683)
                                                                                          ...+.+++|+|+
T Consensus       194 --------------------------------------------------------------------~~~v~~l~~sp~  205 (345)
T 3fm0_A          194 --------------------------------------------------------------------ESTVWSLAFDPS  205 (345)
T ss_dssp             --------------------------------------------------------------------SSCEEEEEECTT
T ss_pred             --------------------------------------------------------------------CCceEEEEECCC
Confidence                                                                                234667778888


Q ss_pred             CCEEEEEcCCCcEEEEEcCCCccC---------------cceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q psy15995        533 HGLVAVGGADSKVHIYELNNKSLS---------------PKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFE  597 (683)
Q Consensus       533 ~~~l~~~~~dg~i~i~d~~~~~~~---------------~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~  597 (683)
                      +++|++++.|++|++|+.......               ......|...|.+++|+|++..|++++.|+.|++|+.....
T Consensus       206 g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~  285 (345)
T 3fm0_A          206 GQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNS  285 (345)
T ss_dssp             SSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTS
T ss_pred             CCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCC
Confidence            888888888888888876322111               01111277889999999999999999999999999987653


Q ss_pred             ccccc-------ceeeecccEEEEEecCCC-CeEEEeecCCcEEEEeCCCCceeeEe
Q psy15995        598 LAHNK-------EWGFHSAKVNCVAWSPDS-ALVASGSLDTTIIIWSLASPAKHIII  646 (683)
Q Consensus       598 ~~~~~-------~~~~h~~~v~~~~~s~d~-~~l~~~~~d~~v~iw~~~~~~~~~~~  646 (683)
                      .....       ...+|...|++++|+|++ .+||+++.||+|++|++.+++.....
T Consensus       286 ~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~  342 (345)
T 3fm0_A          286 DPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH  342 (345)
T ss_dssp             CTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred             CcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence            21111       112488999999999997 59999999999999999988765544

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=4.2e-43  Score=342.99  Aligned_cols=319  Identities=19%  Similarity=0.296  Sum_probs=260.8

Q ss_pred             eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEE
Q psy15995        253 TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL  332 (683)
Q Consensus       253 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  332 (683)
                      .+..|+..+......+.+|...|++++|+|++++|++|+.||+|++||..+++....+..  |...|.+++|+|++++|+
T Consensus        47 ~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~--h~~~v~~~~~s~~g~~la  124 (380)
T 3iz6_a           47 TAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL--HCPWVMECAFAPNGQSVA  124 (380)
T ss_dssp             GCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC--CCTTCCCCEECTTSSEEE
T ss_pred             cccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEec--CCCCEEEEEECCCCCEEE
Confidence            344567677778888999999999999999999999999999999999999999888876  999999999999999999


Q ss_pred             EEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeC
Q psy15995        333 TASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSP  412 (683)
Q Consensus       333 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  412 (683)
                      +++.|+.+++||+.+.....                                     ........+.+|...+.++.|.|
T Consensus       125 s~~~d~~v~iw~~~~~~~~~-------------------------------------~~~~~~~~~~gh~~~v~~~~~~~  167 (380)
T 3iz6_a          125 CGGLDSACSIFNLSSQADRD-------------------------------------GNMPVSRVLTGHKGYASSCQYVP  167 (380)
T ss_dssp             ECCSSSCCEEEECCCCSSCC-------------------------------------CSSTTCCBCCCCSSCCCCCBCCS
T ss_pred             EeeCCCcEEEEECCCCcccc-------------------------------------CCccceeeccCCCcceEEEEEec
Confidence            99999999999997643210                                     00223355778999999999999


Q ss_pred             CC-CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCcee
Q psy15995        413 DR-GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGL  491 (683)
Q Consensus       413 ~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~  491 (683)
                      ++ ..|++++.|+.|++||+.+++....+....                                               
T Consensus       168 ~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~-----------------------------------------------  200 (380)
T 3iz6_a          168 DQETRLITGSGDQTCVLWDVTTGQRISIFGSEF-----------------------------------------------  200 (380)
T ss_dssp             SSSSCEEEECTTSCEEEECTTTCCEEEEECCCS-----------------------------------------------
T ss_pred             CCCCEEEEECCCCcEEEEEcCCCcEEEEeeccc-----------------------------------------------
Confidence            74 579999999999999999887654432100                                               


Q ss_pred             eecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEcc-CCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEE
Q psy15995        492 DIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDH-EHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDC  570 (683)
Q Consensus       492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~  570 (683)
                                               ...+...+.++++++ ++.++++|+.|+.|++||+...........+|...|+++
T Consensus       201 -------------------------~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v  255 (380)
T 3iz6_a          201 -------------------------PSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSV  255 (380)
T ss_dssp             -------------------------SSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEE
T ss_pred             -------------------------CCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEE
Confidence                                     001223456677765 788999999999999999985543334455799999999


Q ss_pred             EECCCCCEEEEEeCCCeEEEEECCCCcccccccee-----eecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeE
Q psy15995        571 SFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWG-----FHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHII  645 (683)
Q Consensus       571 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-----~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~  645 (683)
                      +|+|++++|++++.|++|++||+.+++........     .+...|++++|+|+|++|++|+.||.|++||+..++....
T Consensus       256 ~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~  335 (380)
T 3iz6_a          256 KFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLN  335 (380)
T ss_dssp             EECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEE
T ss_pred             EEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEE
Confidence            99999999999999999999999998765433221     1223589999999999999999999999999999887766


Q ss_pred             eec--CCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEeecc
Q psy15995        646 IKN--AHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       646 ~~~--~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~~~  682 (683)
                      +..  ..|.+.|++++|+ ++.+|+|++.|+.|++|+++.
T Consensus       336 ~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~  375 (380)
T 3iz6_a          336 LGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG  375 (380)
T ss_dssp             ECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred             EecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence            621  3478999999999 788999999999999999864

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=3.5e-42  Score=327.58  Aligned_cols=300  Identities=18%  Similarity=0.301  Sum_probs=253.5

Q ss_pred             cccccccCcccceEEEEECCCC-cEEEEecCCCCEEEEeCCCcc-----cccccccccCCCCcccceeeeeecceeeeEe
Q psy15995         76 AISDIYTEHSCAVNVAKYSPSG-FYIASGDISGKVRIWDTVNKE-----HILKNEFHPIGGPIKDIGTLLSLTSIRNILV  149 (683)
Q Consensus        76 ~~~~~~~~h~~~v~~~~~s~d~-~~las~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  149 (683)
                      .+..+|.+|.+.|++++|+|++ ++|++|+.|++|++||+....     .+..+..|.              ..|.+++|
T Consensus         8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~--------------~~v~~~~~   73 (319)
T 3frx_A            8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHS--------------HIVQDCTL   73 (319)
T ss_dssp             EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCS--------------SCEEEEEE
T ss_pred             EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCc--------------ccEEEEEE
Confidence            3456789999999999999965 899999999999999986542     233333343              77999999


Q ss_pred             eccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCC
Q psy15995        150 LSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQS  229 (683)
Q Consensus       150 s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (683)
                      +|++++|++++.|++|++||+.+++.+  ..+.+|...|.+++|+|+++++++++.++.  +.+|+.+ +..+..+.+|.
T Consensus        74 s~dg~~l~s~s~D~~v~~wd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~--i~vwd~~-~~~~~~~~~h~  148 (319)
T 3frx_A           74 TADGAYALSASWDKTLRLWDVATGETY--QRFVGHKSDVMSVDIDKKASMIISGSRDKT--IKVWTIK-GQCLATLLGHN  148 (319)
T ss_dssp             CTTSSEEEEEETTSEEEEEETTTTEEE--EEEECCSSCEEEEEECTTSCEEEEEETTSC--EEEEETT-SCEEEEECCCS
T ss_pred             CCCCCEEEEEeCCCEEEEEECCCCCee--EEEccCCCcEEEEEEcCCCCEEEEEeCCCe--EEEEECC-CCeEEEEeccC
Confidence            999999999999999999999998855  445678899999999999999999988764  7888875 56778889999


Q ss_pred             cCeEEEEeecCCC-----eEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC
Q psy15995        230 KPINSCDFKPSRP-----FRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA  304 (683)
Q Consensus       230 ~~v~~~~~~~~~~-----~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  304 (683)
                      ..|.++.|.|...     ..+++++.|+.|++||+++.+....+.+|...|.+++|+|++++|++++.||.|++||+.++
T Consensus       149 ~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~  228 (319)
T 3frx_A          149 DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK  228 (319)
T ss_dssp             SCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred             CcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence            9999999999643     25999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEE
Q psy15995        305 DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFIS  384 (683)
Q Consensus       305 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~  384 (683)
                      +.+..+.   +...|.+++|+|++.++++++.+ .+++|++.....+..+...                           
T Consensus       229 ~~~~~~~---~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~---------------------------  277 (319)
T 3frx_A          229 KAMYTLS---AQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPE---------------------------  277 (319)
T ss_dssp             EEEEEEE---CCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCC---------------------------
T ss_pred             cEEEEec---CCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCcc---------------------------
Confidence            9988886   45689999999999999888765 5999999876654443111                           


Q ss_pred             EEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC
Q psy15995        385 YLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG  434 (683)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~  434 (683)
                               .......|...+.+++|+|+|++|++|+.||.|++||+.++
T Consensus       278 ---------~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          278 ---------FAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             ---------CTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred             ---------ccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence                     00112346778999999999999999999999999998653

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=7.1e-42  Score=325.47  Aligned_cols=293  Identities=20%  Similarity=0.337  Sum_probs=243.6

Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC-----CceeeeccccccCeEEEEECCCCCEEEEEcCCCc
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP-----FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGK  295 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  295 (683)
                      ...++.+|.+.|++++|+|+++.+|++++.|++|++|++..     +..+..+.+|...|.+++|+|++++|++++.|++
T Consensus         9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~   88 (319)
T 3frx_A            9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT   88 (319)
T ss_dssp             EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence            34568899999999999998755699999999999999753     3346678899999999999999999999999999


Q ss_pred             EEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEE
Q psy15995        296 VFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLL  375 (683)
Q Consensus       296 i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  375 (683)
                      |++||+.+++.+..+..  |...|.+++|+|++++|++++.|+.|++||++.. .+                        
T Consensus        89 v~~wd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~------------------------  141 (319)
T 3frx_A           89 LRLWDVATGETYQRFVG--HKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CL------------------------  141 (319)
T ss_dssp             EEEEETTTTEEEEEEEC--CSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EE------------------------
T ss_pred             EEEEECCCCCeeEEEcc--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eE------------------------
Confidence            99999999999988875  9999999999999999999999999999998632 21                        


Q ss_pred             EEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCC------CCEEEEEeCCCcEEEEcCCCCCcceeccCCCCccee
Q psy15995        376 TVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPD------RGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN  449 (683)
Q Consensus       376 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~  449 (683)
                                          ..+.+|...|.+++++|.      +..+++++.|+.|++||+.+.+....+ .+      
T Consensus       142 --------------------~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~------  194 (319)
T 3frx_A          142 --------------------ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF-IG------  194 (319)
T ss_dssp             --------------------EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE-CC------
T ss_pred             --------------------EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee-cC------
Confidence                                234568889999999985      447899999999999998765433322 11      


Q ss_pred             EEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEE
Q psy15995        450 GMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISL  529 (683)
Q Consensus       450 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  529 (683)
                                                                                            +...+.++++
T Consensus       195 ----------------------------------------------------------------------h~~~v~~~~~  204 (319)
T 3frx_A          195 ----------------------------------------------------------------------HNSNINTLTA  204 (319)
T ss_dssp             ----------------------------------------------------------------------CCSCEEEEEE
T ss_pred             ----------------------------------------------------------------------CCCcEEEEEE
Confidence                                                                                  2335678899


Q ss_pred             ccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccc------
Q psy15995        530 DHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKE------  603 (683)
Q Consensus       530 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~------  603 (683)
                      +|++++|++++.||.|++||+.+++.....  .+...|.+++|+|++.+|++++.+ .+++|++..+.......      
T Consensus       205 sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~  281 (319)
T 3frx_A          205 SPDGTLIASAGKDGEIMLWNLAAKKAMYTL--SAQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGY  281 (319)
T ss_dssp             CTTSSEEEEEETTCEEEEEETTTTEEEEEE--ECCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTC
T ss_pred             cCCCCEEEEEeCCCeEEEEECCCCcEEEEe--cCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCcccccc
Confidence            999999999999999999999988765433  356789999999999999988765 59999998765443221      


Q ss_pred             eeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCC
Q psy15995        604 WGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASP  640 (683)
Q Consensus       604 ~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~  640 (683)
                      ...|...+.+++|+|||++|++|+.||.|++||+.++
T Consensus       282 ~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          282 SKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             CGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred             ccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence            1125677999999999999999999999999998764

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=3.2e-42  Score=329.28  Aligned_cols=294  Identities=17%  Similarity=0.217  Sum_probs=237.6

Q ss_pred             CCcccCCCeEEEeeCCCCCeEEEecCCeEEEEeCCC-----------CcccccccCcccceEEEEECCCCcEEEEecCCC
Q psy15995         39 LPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIEN-----------PAISDIYTEHSCAVNVAKYSPSGFYIASGDISG  107 (683)
Q Consensus        39 ~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~-----------~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg  107 (683)
                      .|..++..+.+++|||||++|+.++++.+++||...           .........|...|.+++|+||+ +|++|+.||
T Consensus        25 ~~~~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg  103 (344)
T 4gqb_B           25 APACMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSG  103 (344)
T ss_dssp             SCSSCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTS
T ss_pred             CcccccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCC
Confidence            344456778999999999999999888888886321           11111222467789999999996 678999999


Q ss_pred             CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCC
Q psy15995        108 KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGP  187 (683)
Q Consensus       108 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  187 (683)
                      +|+|||+.+++.+.......          ..|...|.+++|+|+|++|++|+.|++|++||+.+++.+  ..+.+|.+.
T Consensus       104 ~v~lWd~~~~~~~~~~~~~~----------~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~--~~~~~h~~~  171 (344)
T 4gqb_B          104 AVELWELDENETLIVSKFCK----------YEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVL--SSYRAHAAQ  171 (344)
T ss_dssp             EEEEEEECTTSSCEEEEEEE----------ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSC
T ss_pred             EEEEEeccCCCceeEeeccc----------cCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE--EEEcCcCCc
Confidence            99999999987665443211          112267999999999999999999999999999998865  456678899


Q ss_pred             eeEEEEcCCCCe-EEEEecCCceEEEEEEccCCCceeeee--cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce
Q psy15995        188 IKDIAWSPDNQR-MVVVGEGRERFGHVFMSETGTSVGEIS--GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF  264 (683)
Q Consensus       188 i~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  264 (683)
                      |.+++|+|++.. +++++.++.  +.+|+..+++....+.  .|...+.+++|+|++..++++|+.||+|++||+++++.
T Consensus       172 V~~~~~~~~~~~~l~s~s~D~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~  249 (344)
T 4gqb_B          172 VTCVAASPHKDSVFLSCSEDNR--ILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC  249 (344)
T ss_dssp             EEEEEECSSCTTEEEEEETTSC--EEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C
T ss_pred             eEEEEecCCCCCceeeeccccc--cccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE
Confidence            999999999864 566665543  7899999998887764  45667999999997766789999999999999999999


Q ss_pred             eeeccccccCeEEEEECCCC-CEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCC-EEEEEECCCcEEE
Q psy15995        265 KMTKQEHSRFVQAVRYSPSG-SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGT-QLLTASGDKTCKL  342 (683)
Q Consensus       265 ~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i  342 (683)
                      +..+.+|...|++++|+|++ ++|++++.|++|++||+.+++.... .  +|.+.|.+++|+|+++ +|++++.|++|++
T Consensus       250 ~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~-~--~H~~~V~~v~~sp~~~~llas~s~D~~v~~  326 (344)
T 4gqb_B          250 VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS-Q--AHRDFVRDATWSPLNHSLLTTVGWDHQVVH  326 (344)
T ss_dssp             CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE-C--CCSSCEEEEEECSSSTTEEEEEETTSCEEE
T ss_pred             EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE-c--CCCCCEEEEEEeCCCCeEEEEEcCCCeEEE
Confidence            99999999999999999998 5799999999999999999887654 3  4999999999999886 5678999999999


Q ss_pred             EECCCCce
Q psy15995        343 WDIETKSV  350 (683)
Q Consensus       343 wd~~~~~~  350 (683)
                      |++.+...
T Consensus       327 w~v~~~~~  334 (344)
T 4gqb_B          327 HVVPTEPL  334 (344)
T ss_dssp             EECCC---
T ss_pred             EECCCCCC
Confidence            99987543

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=1.2e-41  Score=329.27  Aligned_cols=325  Identities=17%  Similarity=0.176  Sum_probs=275.8

Q ss_pred             CCeEEEeeCCCCCeEEEec-CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccc
Q psy15995         45 GQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKN  123 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~-~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~  123 (683)
                      +.+.++++||||++++++. ++.+.+|+...........+|...|++++|+|++++|++++ ||.|++||+.+++....+
T Consensus        10 ~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~   88 (337)
T 1gxr_A           10 KPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPV   88 (337)
T ss_dssp             EECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCS
T ss_pred             CceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeee
Confidence            4677899999999999874 55566666555544444558999999999999999999999 999999999887544333


Q ss_pred             ccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEE
Q psy15995        124 EFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV  203 (683)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  203 (683)
                      ...         ....+...+.+++|+|++++|++++.|+.|++||+.+++......+..+...+.+++|+|++++++++
T Consensus        89 ~~~---------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  159 (337)
T 1gxr_A           89 SQL---------DCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSC  159 (337)
T ss_dssp             EEE---------ECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred             ecc---------cccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEE
Confidence            211         00112367999999999999999999999999999998765566677788999999999999999998


Q ss_pred             ecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCC
Q psy15995        204 GEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPS  283 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~  283 (683)
                      +.++.  +.+|+.++++....+..|...|.+++|+|+++. +++++.|+.|++||+++++....+. +...+.+++|+|+
T Consensus       160 ~~dg~--v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~  235 (337)
T 1gxr_A          160 CSDGN--IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTK-LWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPT  235 (337)
T ss_dssp             ETTSC--EEEEETTTTEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTT
T ss_pred             eCCCc--EEEEeCCCCceeeeeecccCceEEEEECCCCCE-EEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCC
Confidence            87654  789999999999999999999999999999985 9999999999999999988877764 7788999999999


Q ss_pred             CCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceec
Q psy15995        284 GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQ  363 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  363 (683)
                      ++++++++.++.|++||+.+++.... .  .|...|.+++|+|++++|++++.||.+++||+.+++.+..          
T Consensus       236 ~~~l~~~~~~~~i~~~~~~~~~~~~~-~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~----------  302 (337)
T 1gxr_A          236 GEWLAVGMESSNVEVLHVNKPDKYQL-H--LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ----------  302 (337)
T ss_dssp             SSEEEEEETTSCEEEEETTSSCEEEE-C--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE----------
T ss_pred             CCEEEEEcCCCcEEEEECCCCCeEEE-c--CCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE----------
Confidence            99999999999999999998876543 3  3889999999999999999999999999999998765422          


Q ss_pred             eEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcC
Q psy15995        364 QVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNA  431 (683)
Q Consensus       364 ~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~  431 (683)
                                                         ..|...+.+++|+|++++|++++.||.|++|++
T Consensus       303 -----------------------------------~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          303 -----------------------------------SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             -----------------------------------EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             -----------------------------------ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence                                               236788999999999999999999999999986

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1.1e-41  Score=340.03  Aligned_cols=346  Identities=14%  Similarity=0.183  Sum_probs=281.5

Q ss_pred             CeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEec
Q psy15995        231 PINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL  310 (683)
Q Consensus       231 ~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~  310 (683)
                      .++.++|+|++++ +++++.|+.+++||..+++....+..| ..+....|+|++++|++++.||.|++||+.+++....+
T Consensus        58 ~~~~~~~s~~g~~-l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  135 (420)
T 3vl1_A           58 AGKGNTFEKVGSH-LYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID  135 (420)
T ss_dssp             CCTTCEEEEEETT-EEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEET
T ss_pred             cccceeeeecCCe-EEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeec
Confidence            3557899999996 999999999999999888877777666 44556678999999999999999999999999988887


Q ss_pred             cCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCC
Q psy15995        311 GNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN  390 (683)
Q Consensus       311 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~  390 (683)
                      ..  |...|.+++|+|++++|++++.|+.|++||+++++.+.                                      
T Consensus       136 ~~--h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~--------------------------------------  175 (420)
T 3vl1_A          136 QA--HVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPR--------------------------------------  175 (420)
T ss_dssp             TS--SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCE--------------------------------------
T ss_pred             cc--ccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCce--------------------------------------
Confidence            55  99999999999999999999999999999998765433                                      


Q ss_pred             CCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccC--CCCcceeEEEEeCCeEEEEEcCCeEE
Q psy15995        391 PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGA--GHGNQINGMKATGELLYTCGIDDTIK  468 (683)
Q Consensus       391 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~--~~~~~v~~~~~~~~~l~~~~~d~~i~  468 (683)
                            .+.+|...|.+++|+|++++|++++.|+.|++||+++++....+..  .+...+.++.+...            
T Consensus       176 ------~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------  237 (420)
T 3vl1_A          176 ------TLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVG------------  237 (420)
T ss_dssp             ------EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEEC------------
T ss_pred             ------EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecC------------
Confidence                  3467899999999999999999999999999999999887766542  34555655554300            


Q ss_pred             EEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEE
Q psy15995        469 QVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIY  548 (683)
Q Consensus       469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~  548 (683)
                                                                 ............+.+++++|++++|++++.||.|++|
T Consensus       238 -------------------------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~  274 (420)
T 3vl1_A          238 -------------------------------------------TDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVH  274 (420)
T ss_dssp             -------------------------------------------CCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEE
T ss_pred             -------------------------------------------CcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEE
Confidence                                                       0000011123457888999999999999999999999


Q ss_pred             EcCCCccCcceeecCCcCeeEEEECCCCC-EEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEee
Q psy15995        549 ELNNKSLSPKAELDHLGPVTDCSFSPSNE-YLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGS  627 (683)
Q Consensus       549 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~  627 (683)
                      |+.+++........|...|++++|+|+++ +|++++.||.|++||+.+++.........|...|+++.+ |++++|++++
T Consensus       275 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~  353 (420)
T 3vl1_A          275 NVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSG  353 (420)
T ss_dssp             ETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEET
T ss_pred             ECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEec
Confidence            99998877666666889999999999999 999999999999999998765322222226777888855 5788999999


Q ss_pred             cCCcEEEEeCCCCcee---------eEeecCCCCCCeeEEEEc-cCC---eEEEeeCCCcEEEEeecc
Q psy15995        628 LDTTIIIWSLASPAKH---------IIIKNAHPQSQITRLQWL-DND---LLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       628 ~d~~v~iw~~~~~~~~---------~~~~~~~~~~~v~~l~~~-~~~---~l~s~~~d~~v~vw~~~~  682 (683)
                      .|+.|++|++..+...         ..+  ..|...|.+++|+ ++.   .|++++.+|.+.+|++++
T Consensus       354 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~  419 (420)
T 3vl1_A          354 FDTSIKLDIISDPESERPAIEFETPTFL--VSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN  419 (420)
T ss_dssp             TTEEEEEEEECCTTCCSCEECTTSCEEE--CCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred             CCccEEEEeccCCCCCccceeccCccEE--ccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence            9999999999874322         122  2367899999999 556   699999999999999874

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.5e-43  Score=350.69  Aligned_cols=361  Identities=12%  Similarity=0.145  Sum_probs=281.7

Q ss_pred             CCeEEEeeCCCCC-eEEEe-----------cCCeEEEEeCCCCc---ccccccCcccceEEEEECCCCcEEEEecCCCCE
Q psy15995         45 GQPIVLGGDPKGK-NFLYT-----------NGNSVIIRNIENPA---ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKV  109 (683)
Q Consensus        45 ~~~~~~~~s~~~~-~l~~~-----------~~~~i~v~~~~~~~---~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i  109 (683)
                      ..+.+++|||+|+ +|+++           .++.|++||+.+++   .+..+ .|...|++++|+|++++||+++.||.|
T Consensus        13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v   91 (416)
T 2pm9_A           13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSL   91 (416)
T ss_dssp             EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred             hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeE
Confidence            3577899999998 78876           46799999999876   33333 699999999999999999999999999


Q ss_pred             EEEeCCC----cccccccccccCCCCcccceeeeeecceeeeEeecc-ceEEEeecCCccEEEEeccccc------eeee
Q psy15995        110 RIWDTVN----KEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI-GFYIASGDISGKVRIWDTVNKE------HILK  178 (683)
Q Consensus       110 ~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iwd~~~~~------~~~~  178 (683)
                      ++||+.+    .+.+..+..|.              ..|.+++|+|+ +.+|++++.|+.|++||+.+++      ....
T Consensus        92 ~vw~~~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  157 (416)
T 2pm9_A           92 ELYSTNEANNAINSMARFSNHS--------------SSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLT  157 (416)
T ss_dssp             EEECCSSTTSCCCEEEECCCSS--------------SCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBC
T ss_pred             EEeecccccccccchhhccCCc--------------cceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccc
Confidence            9999987    33455554444              78999999998 8999999999999999999876      2222


Q ss_pred             -ccccccCCCeeEEEEcCC-CCeEEEEecCCceEEEEEEccCCCceeeeecC------CcCeEEEEeecCCCeEEEEeeC
Q psy15995        179 -NEFHPIGGPIKDIAWSPD-NQRMVVVGEGRERFGHVFMSETGTSVGEISGQ------SKPINSCDFKPSRPFRIITGSE  250 (683)
Q Consensus       179 -~~~~~~~~~i~~~~~s~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~  250 (683)
                       .....|...|.+++|+|+ +.++++++.++.  +.+|+.++++.+..+..+      ...|.+++|+|++..++++++.
T Consensus       158 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  235 (416)
T 2pm9_A          158 PGQSMSSVDEVISLAWNQSLAHVFASAGSSNF--ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATG  235 (416)
T ss_dssp             CCCSCCSSCCCCEEEECSSCTTEEEEESSSSC--EEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEEC
T ss_pred             cccccCCCCCeeEEEeCCCCCcEEEEEcCCCC--EEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEEC
Confidence             234567789999999999 667777666543  799999999988888877      7899999999998656999999


Q ss_pred             CC---eEEEEcCCCC-ceeeecc-ccccCeEEEEECC-CCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEE
Q psy15995        251 DN---TIAVFEGPPF-KFKMTKQ-EHSRFVQAVRYSP-SGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW  324 (683)
Q Consensus       251 d~---~i~iw~~~~~-~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~  324 (683)
                      |+   .|++||++++ +....+. +|...|.+++|+| ++++|++++.||.|++||+++++.+..+..  |...|.+++|
T Consensus       236 d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~--~~~~v~~~~~  313 (416)
T 2pm9_A          236 SDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA--RGNWCFKTKF  313 (416)
T ss_dssp             CSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC--SSSCCCCEEE
T ss_pred             CCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC--CCCceEEEEE
Confidence            98   9999999986 5667777 8999999999999 899999999999999999999999988875  8999999999


Q ss_pred             ccCC-CEEEEEECCCcEEEEECCCCceeeEEEe-cCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeecc
Q psy15995        325 KPDG-TQLLTASGDKTCKLWDIETKSVVSEFIM-GNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHN  402 (683)
Q Consensus       325 ~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~  402 (683)
                      +|++ ++|++++.|+.|++||+.+......... ..........+.+.+..++.+...+.+.   +       .....|.
T Consensus       314 s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~  383 (416)
T 2pm9_A          314 APEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFH---L-------QAPTWYG  383 (416)
T ss_dssp             CTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSC---C-------CCCSTTC
T ss_pred             CCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccccccccc---c-------cCCcccc
Confidence            9998 8999999999999999988764332211 0000000111111111111111111111   0       1223467


Q ss_pred             ccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC
Q psy15995        403 KPITALALSPDRGTVFTGSHDGFITRWNAKTG  434 (683)
Q Consensus       403 ~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~  434 (683)
                      .++.+++|+|+|++|++++.|+.|++|++.+.
T Consensus       384 ~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~  415 (416)
T 2pm9_A          384 EPSPAAHWAFGGKLVQITPDGKGVSITNPKIS  415 (416)
T ss_dssp             CCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred             CCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence            78889999999999999999999999998764

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.1e-41  Score=337.06  Aligned_cols=342  Identities=15%  Similarity=0.233  Sum_probs=275.8

Q ss_pred             EEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcC----CCCc------eeeeccc----------
Q psy15995        211 GHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG----PPFK------FKMTKQE----------  270 (683)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~----~~~~------~~~~~~~----------  270 (683)
                      ..+|+++..........|.+.|.+++|+|+++.+|++++.|+.|++|++    .+++      ....+..          
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (425)
T 1r5m_A           27 DSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGK  106 (425)
T ss_dssp             -------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC-----
T ss_pred             cccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccC
Confidence            3566666655555566677999999999999933999999999999999    8877      3444443          


Q ss_pred             cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCce
Q psy15995        271 HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSV  350 (683)
Q Consensus       271 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  350 (683)
                      |...|.+++|+|++++|++++.||.|++|| .+++.+..+..  |...|.+++|+|++++|++++.|+.+++||+.+++.
T Consensus       107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  183 (425)
T 1r5m_A          107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNF--HRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTV  183 (425)
T ss_dssp             -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECC--CCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE
T ss_pred             CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccC--CCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE
Confidence            677999999999999999999999999999 67777777765  999999999999999999999999999999999988


Q ss_pred             eeEEEecCcce--------------eceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCE
Q psy15995        351 VSEFIMGNQVE--------------DQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGT  416 (683)
Q Consensus       351 ~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  416 (683)
                      +..+.......              ...+.+.++ ..+++++.+|.+++||+.. ......+..|...|.+++|+|++++
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~  261 (425)
T 1r5m_A          184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITE-KTPTGKLIGHHGPISVLEFNDTNKL  261 (425)
T ss_dssp             EEEECCC---------------CCCBSCCEEEET-TEEEEECGGGCEEEEETTC-SSCSEEECCCSSCEEEEEEETTTTE
T ss_pred             EEEeeccccCccceeeccccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCC-CceeeeeccCCCceEEEEECCCCCE
Confidence            77765443321              555666665 6689999999999999987 4566777889999999999999999


Q ss_pred             EEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCC
Q psy15995        417 VFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDEN  496 (683)
Q Consensus       417 l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (683)
                      |++++.|+.|++||+.+++...... .|                                                    
T Consensus       262 l~~~~~d~~i~i~d~~~~~~~~~~~-~~----------------------------------------------------  288 (425)
T 1r5m_A          262 LLSASDDGTLRIWHGGNGNSQNCFY-GH----------------------------------------------------  288 (425)
T ss_dssp             EEEEETTSCEEEECSSSBSCSEEEC-CC----------------------------------------------------
T ss_pred             EEEEcCCCEEEEEECCCCccceEec-CC----------------------------------------------------
Confidence            9999999999999998765544331 12                                                    


Q ss_pred             eEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCC
Q psy15995        497 TLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSN  576 (683)
Q Consensus       497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~  576 (683)
                                              ...+.+++++|++ ++++++.|+.|++||+.+++..... ..|...|.+++|+|++
T Consensus       289 ------------------------~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~i~~~~~s~~~  342 (425)
T 1r5m_A          289 ------------------------SQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS-IVDGVPIFAGRISQDG  342 (425)
T ss_dssp             ------------------------SSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE-ECTTCCEEEEEECTTS
T ss_pred             ------------------------CccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec-ccCCccEEEEEEcCCC
Confidence                                    2346778888988 8999999999999999888765333 3578899999999999


Q ss_pred             CEEEEEeCCCeEEEEECCCCc--------------------cccccceeeecc--cEEEEEecCCCCeEEEeecCCcEEE
Q psy15995        577 EYLVASDAHRKVVLYRVPDFE--------------------LAHNKEWGFHSA--KVNCVAWSPDSALVASGSLDTTIII  634 (683)
Q Consensus       577 ~~l~~~~~d~~i~i~~~~~~~--------------------~~~~~~~~~h~~--~v~~~~~s~d~~~l~~~~~d~~v~i  634 (683)
                      ++|++++.||.|++||+.+++                    .+.  .+.+|..  .|++++|+|++++|++++.||.|++
T Consensus       343 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i  420 (425)
T 1r5m_A          343 QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYA--SYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSV  420 (425)
T ss_dssp             SEEEEEETTSCEEEEECHHHHC--------------CEECCEEE--EECCTTCCCCEEEEEECTTSSEEEEEESSSCCEE
T ss_pred             CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhh--hhcCcccCCceEEEEccCCCceEEEEecCceEEE
Confidence            999999999999999998776                    433  3333655  9999999999999999999999999


Q ss_pred             EeCC
Q psy15995        635 WSLA  638 (683)
Q Consensus       635 w~~~  638 (683)
                      |+++
T Consensus       421 w~~~  424 (425)
T 1r5m_A          421 VAIP  424 (425)
T ss_dssp             EECC
T ss_pred             Eeec
Confidence            9986

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.5e-42  Score=344.50  Aligned_cols=365  Identities=16%  Similarity=0.255  Sum_probs=278.1

Q ss_pred             cceeeeEeeccce-EEEee----------cCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceE
Q psy15995        142 TSIRNILVLSIGF-YIASG----------DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERF  210 (683)
Q Consensus       142 ~~i~~~~~s~~~~-~l~~~----------~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~  210 (683)
                      ..+.+++|+|+++ +|+++          +.|+.|++||+.+++.........+...|.+++|+|++++|++++.++.  
T Consensus        13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--   90 (416)
T 2pm9_A           13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS--   90 (416)
T ss_dssp             EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC--
T ss_pred             hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe--
Confidence            5788999999997 99999          8899999999998764322233346789999999999999999887654  


Q ss_pred             EEEEEccC----CCceeeeecCCcCeEEEEeecC-CCeEEEEeeCCCeEEEEcCCCCc------eeee---ccccccCeE
Q psy15995        211 GHVFMSET----GTSVGEISGQSKPINSCDFKPS-RPFRIITGSEDNTIAVFEGPPFK------FKMT---KQEHSRFVQ  276 (683)
Q Consensus       211 ~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~------~~~~---~~~~~~~v~  276 (683)
                      +.+|+...    .+.+..+.+|...|.+++|+|+ +. ++++++.|+.|++||+.+.+      ....   ...|...|.
T Consensus        91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~  169 (416)
T 2pm9_A           91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDN-VLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI  169 (416)
T ss_dssp             EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTT-BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred             EEEeecccccccccchhhccCCccceEEEEEcCCCCC-EEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence            78888877    3578889999999999999998 55 59999999999999998876      3333   367899999


Q ss_pred             EEEECCC-CCEEEEEcCCCcEEEEeCCCCeeEEeccCCc----cccCeEEEEEccCC-CEEEEEECCC---cEEEEECCC
Q psy15995        277 AVRYSPS-GSHFASAGFDGKVFLYDGASADLVSELGNPA----HKGGVYAVAWKPDG-TQLLTASGDK---TCKLWDIET  347 (683)
Q Consensus       277 ~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~-~~l~~~~~dg---~i~iwd~~~  347 (683)
                      +++|+|+ +.+|++++.||.|++||+++++.+..+....    |...|.+++|+|++ .++++++.|+   .|++||+++
T Consensus       170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~  249 (416)
T 2pm9_A          170 SLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN  249 (416)
T ss_dssp             EEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS
T ss_pred             EEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC
Confidence            9999999 7899999999999999999999888886521    17899999999987 6899999998   999999987


Q ss_pred             CceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeee-eccccEEEEEEeC-CCCEEEEEeCCCc
Q psy15995        348 KSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIK-GHNKPITALALSP-DRGTVFTGSHDGF  425 (683)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~dg~  425 (683)
                      +..                                           +...+. +|...|.+++|+| ++++|++++.|+.
T Consensus       250 ~~~-------------------------------------------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~  286 (416)
T 2pm9_A          250 ANT-------------------------------------------PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT  286 (416)
T ss_dssp             TTS-------------------------------------------CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE
T ss_pred             CCC-------------------------------------------CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCC
Confidence            531                                           123345 7889999999999 9999999999999


Q ss_pred             EEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEece
Q psy15995        426 ITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQ  505 (683)
Q Consensus       426 i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (683)
                      |++||+.+++....+. .                                                              
T Consensus       287 v~~wd~~~~~~~~~~~-~--------------------------------------------------------------  303 (416)
T 2pm9_A          287 VLLWNPESAEQLSQFP-A--------------------------------------------------------------  303 (416)
T ss_dssp             EEEECSSSCCEEEEEE-C--------------------------------------------------------------
T ss_pred             EEEeeCCCCccceeec-C--------------------------------------------------------------
Confidence            9999998776544331 1                                                              


Q ss_pred             EEEEeCCceeeeecCCCCCcEEEEccCC-CEEEEEcCCCcEEEEEcCCCccCcceee-cCCcCeeEEEECCCCCEEEEEe
Q psy15995        506 ISIVENGAKVSSLPIDYEPSSISLDHEH-GLVAVGGADSKVHIYELNNKSLSPKAEL-DHLGPVTDCSFSPSNEYLVASD  583 (683)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~  583 (683)
                                    +...+.+++|+|++ .+|++++.|+.|++|++.+......... ..........+.+.+..++.++
T Consensus       304 --------------~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (416)
T 2pm9_A          304 --------------RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKE  369 (416)
T ss_dssp             --------------SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCS
T ss_pred             --------------CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccc
Confidence                          22356788999998 8999999999999999987765432211 1112222334444444444433


Q ss_pred             CCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCC
Q psy15995        584 AHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASP  640 (683)
Q Consensus       584 ~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~  640 (683)
                      ..+.+.+         ....+  |..++++++|+|||++||+++.|+.|+||++.+.
T Consensus       370 ~~~~~~~---------~~~~~--~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~  415 (416)
T 2pm9_A          370 KPSVFHL---------QAPTW--YGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS  415 (416)
T ss_dssp             CCCSSCC---------CCCST--TCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred             ccccccc---------cCCcc--ccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence            3322211         11111  6778889999999999999999999999999865

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-41  Score=340.71  Aligned_cols=352  Identities=11%  Similarity=0.137  Sum_probs=285.5

Q ss_pred             eEEEEeCCCCcccccccCcccceEEEEECCCCc-EEEEecCCCCEEEEeC----CCccc------ccccccccCCCCccc
Q psy15995         66 SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGF-YIASGDISGKVRIWDT----VNKEH------ILKNEFHPIGGPIKD  134 (683)
Q Consensus        66 ~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~-~las~~~dg~i~iwd~----~~~~~------~~~~~~~~~~~~~~~  134 (683)
                      .+.+|+.+..........|.+.|++++|+|+|+ +||+++.||.|++||+    .+++.      ...+... ....   
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---  101 (425)
T 1r5m_A           26 IDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHP-FALS---  101 (425)
T ss_dssp             --------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECC-CCCC---
T ss_pred             ccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccc-cccc---
Confidence            456788776655544556779999999999999 9999999999999999    87763      2222211 0000   


Q ss_pred             ceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEE
Q psy15995        135 IGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF  214 (683)
Q Consensus       135 ~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~  214 (683)
                      .....+...|.+++|+|++++|++++.||.|++|| .+++.+  ..+..|...|.+++|+|+++++++++.++.  +.+|
T Consensus       102 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--i~iw  176 (425)
T 1r5m_A          102 ASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALL--NVLNFHRAPIVSVKWNKDGTHIISMDVENV--TILW  176 (425)
T ss_dssp             ------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEE--EEECCCCSCEEEEEECTTSSEEEEEETTCC--EEEE
T ss_pred             ccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCee--eeccCCCccEEEEEECCCCCEEEEEecCCe--EEEE
Confidence            00011235899999999999999999999999999 444433  345567899999999999999999887654  7899


Q ss_pred             EccCCCceeeeecCCcC---------------eEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEE
Q psy15995        215 MSETGTSVGEISGQSKP---------------INSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVR  279 (683)
Q Consensus       215 ~~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~  279 (683)
                      +..+++.+..+..+...               +.++.|+|++  .+++++.++.|++||+.+++....+..|...|.+++
T Consensus       177 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~  254 (425)
T 1r5m_A          177 NVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLE  254 (425)
T ss_dssp             ETTTTEEEEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEE
T ss_pred             ECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEE
Confidence            99999999888888877               9999999987  489999999999999999999999999999999999


Q ss_pred             ECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCc
Q psy15995        280 YSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQ  359 (683)
Q Consensus       280 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  359 (683)
                      |+|++++|++++.||.|++||+.+++....+..  |...|.+++|+|++ .+++++.|+.|++||+.+++.+..+. .+.
T Consensus       255 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~  330 (425)
T 1r5m_A          255 FNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG--HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI-VDG  330 (425)
T ss_dssp             EETTTTEEEEEETTSCEEEECSSSBSCSEEECC--CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE-CTT
T ss_pred             ECCCCCEEEEEcCCCEEEEEECCCCccceEecC--CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc-cCC
Confidence            999999999999999999999999988888865  89999999999999 99999999999999999988877665 344


Q ss_pred             ceeceEEEEecCCEEEEEecCCcEEEEecCCCC-------------------cceeeeeeccc--cEEEEEEeCCCCEEE
Q psy15995        360 VEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS-------------------TPIRVIKGHNK--PITALALSPDRGTVF  418 (683)
Q Consensus       360 ~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~-------------------~~~~~~~~~~~--~v~~~~~~~~~~~l~  418 (683)
                      .....+.++++++++++++.+|.|++||+....                   ..+..+..|..  .|++++|+|++++|+
T Consensus       331 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  410 (425)
T 1r5m_A          331 VPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKIS  410 (425)
T ss_dssp             CCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEE
T ss_pred             ccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEE
Confidence            567788889999999999999999999998643                   15677888876  999999999999999


Q ss_pred             EEeCCCcEEEEcCC
Q psy15995        419 TGSHDGFITRWNAK  432 (683)
Q Consensus       419 ~~~~dg~i~~w~~~  432 (683)
                      +++.||.|++|+++
T Consensus       411 ~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          411 VAYSLQEGSVVAIP  424 (425)
T ss_dssp             EEESSSCCEEEECC
T ss_pred             EEecCceEEEEeec
Confidence            99999999999985

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=4.3e-41  Score=330.35  Aligned_cols=284  Identities=21%  Similarity=0.320  Sum_probs=248.7

Q ss_pred             cCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCccc------------------ceEEEEECCCCcEEEEec
Q psy15995         43 QRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSC------------------AVNVAKYSPSGFYIASGD  104 (683)
Q Consensus        43 ~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~------------------~v~~~~~s~d~~~las~~  104 (683)
                      +.+.+.+++|||||++||++.++.+.+|++.+++.+..+.+|..                  .|++++|+|||++||+|+
T Consensus        63 h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~  142 (393)
T 1erj_A           63 HTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA  142 (393)
T ss_dssp             CSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEE
T ss_pred             CCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEc
Confidence            66788999999999999999999999999999998887776643                  499999999999999999


Q ss_pred             CCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeecccccc
Q psy15995        105 ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPI  184 (683)
Q Consensus       105 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~  184 (683)
                      .|+.|++||+.+++.+..+..|.              ..|.+++|+|++++|++++.|++|++||+.+++......   +
T Consensus       143 ~d~~i~iwd~~~~~~~~~~~~h~--------------~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~---~  205 (393)
T 1erj_A          143 EDRLIRIWDIENRKIVMILQGHE--------------QDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS---I  205 (393)
T ss_dssp             TTSCEEEEETTTTEEEEEECCCS--------------SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---C
T ss_pred             CCCeEEEEECCCCcEEEEEccCC--------------CCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE---c
Confidence            99999999999998887777665              779999999999999999999999999999987654443   3


Q ss_pred             CCCeeEEEEcC-CCCeEEEEecCCceEEEEEEccCCCceeee-------ecCCcCeEEEEeecCCCeEEEEeeCCCeEEE
Q psy15995        185 GGPIKDIAWSP-DNQRMVVVGEGRERFGHVFMSETGTSVGEI-------SGQSKPINSCDFKPSRPFRIITGSEDNTIAV  256 (683)
Q Consensus       185 ~~~i~~~~~s~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i  256 (683)
                      ...+.+++|+| +++++++++.++.  +.+|+..+++.+..+       .+|...|.+++|+|++++ +++++.|+.|++
T Consensus       206 ~~~v~~~~~~~~~~~~l~~~s~d~~--v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-l~s~s~d~~v~~  282 (393)
T 1erj_A          206 EDGVTTVAVSPGDGKYIAAGSLDRA--VRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS-VVSGSLDRSVKL  282 (393)
T ss_dssp             SSCEEEEEECSTTCCEEEEEETTSC--EEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSE-EEEEETTSEEEE
T ss_pred             CCCcEEEEEECCCCCEEEEEcCCCc--EEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCE-EEEEeCCCEEEE
Confidence            47899999999 8899998887754  789999988877766       579999999999999995 999999999999


Q ss_pred             EcCCCC------------ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEE
Q psy15995        257 FEGPPF------------KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW  324 (683)
Q Consensus       257 w~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~  324 (683)
                      ||+++.            .....+.+|...|.+++|+|++++|++++.|+.|++||..+++.+..+..  |...|.+++|
T Consensus       283 wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~--h~~~v~~v~~  360 (393)
T 1erj_A          283 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG--HRNSVISVAV  360 (393)
T ss_dssp             EEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEE
T ss_pred             EECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC--CCCCEEEEEe
Confidence            998653            34556778999999999999999999999999999999999999888865  9999999999


Q ss_pred             cc------CCCEEEEEECCCcEEEEECCCC
Q psy15995        325 KP------DGTQLLTASGDKTCKLWDIETK  348 (683)
Q Consensus       325 ~~------~~~~l~~~~~dg~i~iwd~~~~  348 (683)
                      ++      ++++|++++.||.|++|++...
T Consensus       361 ~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~  390 (393)
T 1erj_A          361 ANGSSLGPEYNVFATGSGDCKARIWKYKKI  390 (393)
T ss_dssp             CSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred             cCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence            86      6789999999999999997643

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=9.9e-41  Score=321.65  Aligned_cols=295  Identities=20%  Similarity=0.310  Sum_probs=234.0

Q ss_pred             ceeeeecCCcCeEEEEe-----ec-CCCeEEEEeeCCCeEEEEcCCCC-------ceeeeccccccCeEEEEECCCCCEE
Q psy15995        221 SVGEISGQSKPINSCDF-----KP-SRPFRIITGSEDNTIAVFEGPPF-------KFKMTKQEHSRFVQAVRYSPSGSHF  287 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~-----~~-~~~~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l  287 (683)
                      ....+.+|.+.|++++|     ++ +++ +|++|+.|++|++||+...       .....+.+|...|.+++|+|++.++
T Consensus        13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~-~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l   91 (343)
T 2xzm_R           13 KRGILEGHSDWVTSIVAGFSQKENEDSP-VLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA   91 (343)
T ss_dssp             EEEEEECCSSCEEEEEECCCSSTTCCCC-EEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred             eeeeeccchhhhhheeeEEEeecCCCCC-EEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence            45678999999999999     66 676 5999999999999998643       3556788999999999999999999


Q ss_pred             EEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEE
Q psy15995        288 ASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSC  367 (683)
Q Consensus       288 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  367 (683)
                      ++++.|++|++||+++++.+..+..  |...|.+++|+|++++|++++.|+.|++||+..... ...             
T Consensus        92 ~s~s~D~~v~lwd~~~~~~~~~~~~--h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~-~~~-------------  155 (343)
T 2xzm_R           92 ISSSWDKTLRLWDLRTGTTYKRFVG--HQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK-FSS-------------  155 (343)
T ss_dssp             EEEETTSEEEEEETTSSCEEEEEEC--CCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE-EEC-------------
T ss_pred             EEEcCCCcEEEEECCCCcEEEEEcC--CCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce-eee-------------
Confidence            9999999999999999999888865  999999999999999999999999999999873221 110             


Q ss_pred             EecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC----------CEEEEEeCCCcEEEEcCCCCCcc
Q psy15995        368 LWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR----------GTVFTGSHDGFITRWNAKTGEND  437 (683)
Q Consensus       368 ~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------~~l~~~~~dg~i~~w~~~~~~~~  437 (683)
                                                  .....|...|.+++|+|++          .++++++.|+.|++||.. .+..
T Consensus       156 ----------------------------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~  206 (343)
T 2xzm_R          156 ----------------------------AEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIR  206 (343)
T ss_dssp             ----------------------------CTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEE
T ss_pred             ----------------------------ecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-Ccee
Confidence                                        1123578889999999986          566666666666666622 1110


Q ss_pred             eeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeee
Q psy15995        438 RVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSS  517 (683)
Q Consensus       438 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (683)
                      ..                                                                             .
T Consensus       207 ~~-----------------------------------------------------------------------------~  209 (343)
T 2xzm_R          207 YT-----------------------------------------------------------------------------F  209 (343)
T ss_dssp             EE-----------------------------------------------------------------------------E
T ss_pred             EE-----------------------------------------------------------------------------E
Confidence            00                                                                             0


Q ss_pred             ecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q psy15995        518 LPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFE  597 (683)
Q Consensus       518 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~  597 (683)
                      ..+...+.+++++|++++|++++.||.|++||+...... .....+...|.+++|+|++++++++ .|+.+++|++.+++
T Consensus       210 ~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~-~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~  287 (343)
T 2xzm_R          210 KAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP-QREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQS  287 (343)
T ss_dssp             ECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC-SEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCC
T ss_pred             cCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccc-ceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCC
Confidence            123446788999999999999999999999999544332 2223356679999999999888755 57889999998766


Q ss_pred             ccc--ccc---------eeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCC
Q psy15995        598 LAH--NKE---------WGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASP  640 (683)
Q Consensus       598 ~~~--~~~---------~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~  640 (683)
                      ...  ...         ..+|...|++++|+|+|++|++|+.||.|++|+++++
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g  341 (343)
T 2xzm_R          288 KAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS  341 (343)
T ss_dssp             SCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred             CCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence            543  111         1148888999999999999999999999999998764

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=1.7e-40  Score=326.18  Aligned_cols=289  Identities=21%  Similarity=0.414  Sum_probs=239.1

Q ss_pred             ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCc----------------cccCeEEEEEccCCCEEEE
Q psy15995        270 EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPA----------------HKGGVYAVAWKPDGTQLLT  333 (683)
Q Consensus       270 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~----------------~~~~i~~~~~~~~~~~l~~  333 (683)
                      .|...|.+++|+|+|++|++++ ++.+++|++.+++.+..+....                +...|.+++|+|++++|++
T Consensus        62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s  140 (393)
T 1erj_A           62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT  140 (393)
T ss_dssp             ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred             CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence            5999999999999999999987 6899999999998887765311                1224899999999999999


Q ss_pred             EECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCC
Q psy15995        334 ASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPD  413 (683)
Q Consensus       334 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  413 (683)
                      ++.|+.|++||+.+++.+                                            ..+.+|...|.+++|+|+
T Consensus       141 ~~~d~~i~iwd~~~~~~~--------------------------------------------~~~~~h~~~v~~~~~~p~  176 (393)
T 1erj_A          141 GAEDRLIRIWDIENRKIV--------------------------------------------MILQGHEQDIYSLDYFPS  176 (393)
T ss_dssp             EETTSCEEEEETTTTEEE--------------------------------------------EEECCCSSCEEEEEECTT
T ss_pred             EcCCCeEEEEECCCCcEE--------------------------------------------EEEccCCCCEEEEEEcCC
Confidence            999999999999876543                                            234678999999999999


Q ss_pred             CCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeee
Q psy15995        414 RGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDI  493 (683)
Q Consensus       414 ~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (683)
                      +++|++++.|+.|++||+++++......                                                    
T Consensus       177 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~----------------------------------------------------  204 (393)
T 1erj_A          177 GDKLVSGSGDRTVRIWDLRTGQCSLTLS----------------------------------------------------  204 (393)
T ss_dssp             SSEEEEEETTSEEEEEETTTTEEEEEEE----------------------------------------------------
T ss_pred             CCEEEEecCCCcEEEEECCCCeeEEEEE----------------------------------------------------
Confidence            9999999999999999998765433221                                                    


Q ss_pred             cCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEcc-CCCEEEEEcCCCcEEEEEcCCCccCccee------ecCCcC
Q psy15995        494 DENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDH-EHGLVAVGGADSKVHIYELNNKSLSPKAE------LDHLGP  566 (683)
Q Consensus       494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------~~~~~~  566 (683)
                                                ....+.+++++| +++++++++.|+.|++||+.++.......      .+|...
T Consensus       205 --------------------------~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~  258 (393)
T 1erj_A          205 --------------------------IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS  258 (393)
T ss_dssp             --------------------------CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSC
T ss_pred             --------------------------cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCC
Confidence                                      112356788888 88999999999999999998876553331      358899


Q ss_pred             eeEEEECCCCCEEEEEeCCCeEEEEECCCCccc----------cccceeeecccEEEEEecCCCCeEEEeecCCcEEEEe
Q psy15995        567 VTDCSFSPSNEYLVASDAHRKVVLYRVPDFELA----------HNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWS  636 (683)
Q Consensus       567 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~----------~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~  636 (683)
                      |++++|+|++++|++++.|+.|++||+.+....          ....+.+|...|.+++|+|++++|++|+.|+.|++||
T Consensus       259 v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd  338 (393)
T 1erj_A          259 VYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWD  338 (393)
T ss_dssp             EEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEE
T ss_pred             EEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            999999999999999999999999999764321          1123445999999999999999999999999999999


Q ss_pred             CCCCceeeEeecCCCCCCeeEEEEcc-------CCeEEEeeCCCcEEEEeeccC
Q psy15995        637 LASPAKHIIIKNAHPQSQITRLQWLD-------NDLLVSVGQDCNTKIWEIAPF  683 (683)
Q Consensus       637 ~~~~~~~~~~~~~~~~~~v~~l~~~~-------~~~l~s~~~d~~v~vw~~~~~  683 (683)
                      +.+++....+..  |...|.+++|++       +++|++++.||+|++|+++++
T Consensus       339 ~~~~~~~~~l~~--h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~  390 (393)
T 1erj_A          339 KKSGNPLLMLQG--HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI  390 (393)
T ss_dssp             TTTCCEEEEEEC--CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred             CCCCeEEEEECC--CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence            999998888765  789999999984       468999999999999998753

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=4.6e-40  Score=313.29  Aligned_cols=293  Identities=22%  Similarity=0.390  Sum_probs=249.0

Q ss_pred             CceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEE
Q psy15995        262 FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCK  341 (683)
Q Consensus       262 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  341 (683)
                      ......+.+|...|.+++|+|++++|++++.||.|++|+..+++....+..  |...|.+++|+|++++|++++.|+.|+
T Consensus        13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~d~~i~   90 (312)
T 4ery_A           13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG--HKLGISDVAWSSDSNLLVSASDDKTLK   90 (312)
T ss_dssp             CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhcc--CCCceEEEEEcCCCCEEEEECCCCEEE
Confidence            455677889999999999999999999999999999999999998888865  999999999999999999999999999


Q ss_pred             EEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEe
Q psy15995        342 LWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS  421 (683)
Q Consensus       342 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  421 (683)
                      +||+++++.+.                                            .+.+|...|.+++|+|+++++++++
T Consensus        91 vwd~~~~~~~~--------------------------------------------~~~~~~~~v~~~~~~~~~~~l~s~~  126 (312)
T 4ery_A           91 IWDVSSGKCLK--------------------------------------------TLKGHSNYVFCCNFNPQSNLIVSGS  126 (312)
T ss_dssp             EEETTTCCEEE--------------------------------------------EEECCSSCEEEEEECSSSSEEEEEE
T ss_pred             EEECCCCcEEE--------------------------------------------EEcCCCCCEEEEEEcCCCCEEEEEe
Confidence            99998876543                                            3456888999999999999999999


Q ss_pred             CCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEE
Q psy15995        422 HDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTV  501 (683)
Q Consensus       422 ~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (683)
                      .|+.|++||+++++...... .|                                                         
T Consensus       127 ~d~~i~iwd~~~~~~~~~~~-~~---------------------------------------------------------  148 (312)
T 4ery_A          127 FDESVRIWDVKTGKCLKTLP-AH---------------------------------------------------------  148 (312)
T ss_dssp             TTSCEEEEETTTCCEEEEEC-CC---------------------------------------------------------
T ss_pred             CCCcEEEEECCCCEEEEEec-CC---------------------------------------------------------
Confidence            99999999998776544331 11                                                         


Q ss_pred             EeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEE
Q psy15995        502 TVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVA  581 (683)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~  581 (683)
                                         ..++.+++++|+++++++++.||.|++||+.+++........+..++..++|+|++++|++
T Consensus       149 -------------------~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  209 (312)
T 4ery_A          149 -------------------SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA  209 (312)
T ss_dssp             -------------------SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEE
T ss_pred             -------------------CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEE
Confidence                               2346778899999999999999999999999887665555557788999999999999999


Q ss_pred             EeCCCeEEEEECCCCccccccceeeecccE---EEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEE
Q psy15995        582 SDAHRKVVLYRVPDFELAHNKEWGFHSAKV---NCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRL  658 (683)
Q Consensus       582 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v---~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l  658 (683)
                      ++.|+.|++||+.+++......  +|...+   ......+++++|++|+.||.|++||+.+++....+..  |.+.|.++
T Consensus       210 ~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~  285 (312)
T 4ery_A          210 ATLDNTLKLWDYSKGKCLKTYT--GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG--HTDVVIST  285 (312)
T ss_dssp             EETTTEEEEEETTTTEEEEEEC--SSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECC--CSSCEEEE
T ss_pred             EcCCCeEEEEECCCCcEEEEEE--ecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhc--cCCcEEEE
Confidence            9999999999999988764433  254432   2233346889999999999999999999988877765  78999999


Q ss_pred             EEc-cCCeEEEee--CCCcEEEEeec
Q psy15995        659 QWL-DNDLLVSVG--QDCNTKIWEIA  681 (683)
Q Consensus       659 ~~~-~~~~l~s~~--~d~~v~vw~~~  681 (683)
                      +|+ ++.+|++++  .|+.|++|+.+
T Consensus       286 ~~~p~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          286 ACHPTENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             EECSSSSEEEEEECTTTCCEEEEECC
T ss_pred             eecCcCCceEEEEccCCccEEEecCC
Confidence            999 677888886  69999999975

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-40  Score=318.83  Aligned_cols=298  Identities=22%  Similarity=0.314  Sum_probs=222.8

Q ss_pred             CCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC--ceeeec-cc-cccCeEEEEECCCCCEEEEEcCCC
Q psy15995        219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF--KFKMTK-QE-HSRFVQAVRYSPSGSHFASAGFDG  294 (683)
Q Consensus       219 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~dg  294 (683)
                      .+.+..+.+|.+.|.+++|+|+   +|++++.|++|++||+..+  +....+ .+ |...|.+++|+|++++|++++.|+
T Consensus         4 ~~~~~~~~~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~   80 (330)
T 2hes_X            4 INLIKSLKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS   80 (330)
T ss_dssp             CEEEEEEECCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred             cccceeeccCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence            3456778999999999999998   5999999999999998875  344444 34 999999999999999999999999


Q ss_pred             cEEEEeCCC-------CeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEE
Q psy15995        295 KVFLYDGAS-------ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSC  367 (683)
Q Consensus       295 ~i~iw~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  367 (683)
                      .|++||...       .+.+..+..  |...|.+++|+|++++|++++.|+.|++||++.....                
T Consensus        81 ~v~iw~~~~~~~~~~~~~~~~~~~~--h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~----------------  142 (330)
T 2hes_X           81 TVSIWAKEESADRTFEMDLLAIIEG--HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE----------------  142 (330)
T ss_dssp             CEEEEEC-------CCCEEEEEEC------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC----------------
T ss_pred             cEEEEEcccCcCccccceeEEEEcC--CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCC----------------
Confidence            999999853       344555554  9999999999999999999999999999999543210                


Q ss_pred             EecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCC--cceeccCCCC
Q psy15995        368 LWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE--NDRVQGAGHG  445 (683)
Q Consensus       368 ~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~--~~~~~~~~~~  445 (683)
                                              ...+..+.+|...|.+++|+|++++|++++.|+.|++||..++.  ....+ .+|.
T Consensus       143 ------------------------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~-~~h~  197 (330)
T 2hes_X          143 ------------------------YECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVL-NGHE  197 (330)
T ss_dssp             ------------------------CEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCS
T ss_pred             ------------------------eEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEc-cCCC
Confidence                                    11224467799999999999999999999999999999976542  22211 2333


Q ss_pred             cceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCc
Q psy15995        446 NQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPS  525 (683)
Q Consensus       446 ~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  525 (683)
                      .                                                                            .+.
T Consensus       198 ~----------------------------------------------------------------------------~v~  201 (330)
T 2hes_X          198 G----------------------------------------------------------------------------TVW  201 (330)
T ss_dssp             S----------------------------------------------------------------------------CEE
T ss_pred             C----------------------------------------------------------------------------cEE
Confidence            3                                                                            345


Q ss_pred             EEEEccC--CCEEEEEcCCCcEEEEEcCCCcc--------CcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCC
Q psy15995        526 SISLDHE--HGLVAVGGADSKVHIYELNNKSL--------SPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPD  595 (683)
Q Consensus       526 ~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~--------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~  595 (683)
                      +++|+|+  +.+|++++.|++|++||+.++..        .......|...|.+++|++++ +|++++.||.|++|+..+
T Consensus       202 ~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~  280 (330)
T 2hes_X          202 SSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVD  280 (330)
T ss_dssp             EEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEET
T ss_pred             EEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCC
Confidence            5666666  55677777777777777654321        111111378899999999765 899999999999999987


Q ss_pred             Cccccc-cceeeecc-cEEEEEecC--CCCeEEEeecCCcEEEEeCCC
Q psy15995        596 FELAHN-KEWGFHSA-KVNCVAWSP--DSALVASGSLDTTIIIWSLAS  639 (683)
Q Consensus       596 ~~~~~~-~~~~~h~~-~v~~~~~s~--d~~~l~~~~~d~~v~iw~~~~  639 (683)
                      ++.... ....+|.. .|++++|+|  ++++||+|+.||+|++|++++
T Consensus       281 ~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          281 GEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             TEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred             CceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence            743111 11223776 899999999  789999999999999999865

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=100.00  E-value=2.5e-39  Score=357.82  Aligned_cols=518  Identities=10%  Similarity=0.069  Sum_probs=376.7

Q ss_pred             CCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCC------CCEEEEeCCCc
Q psy15995         44 RGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDIS------GKVRIWDTVNK  117 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~d------g~i~iwd~~~~  117 (683)
                      .+.+...+|||  +.|+++..+.|.+|++.+++. ..+.+|...|.+++|||||++||+++.+      ..|.+||+.++
T Consensus        14 ~~~~~~~~~S~--~~iaf~~~~~l~~~~~~gg~~-~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g   90 (1045)
T 1k32_A           14 PNLLLNPDIHG--DRIIFVCCDDLWEHDLKSGST-RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG   90 (1045)
T ss_dssp             CCCCEEEEEET--TEEEEEETTEEEEEETTTCCE-EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT
T ss_pred             cceEeCcEEeC--CEEEEEECCcEEEEECCCCcE-EEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCC
Confidence            34567778885  589999889999999998875 4577899999999999999999987543      37999999887


Q ss_pred             ccccccccccCCCCcccceeeeeecce-------eeeEeeccceEEEeecCC------ccEEEEeccccceeeecccccc
Q psy15995        118 EHILKNEFHPIGGPIKDIGTLLSLTSI-------RNILVLSIGFYIASGDIS------GKVRIWDTVNKEHILKNEFHPI  184 (683)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~i-------~~~~~s~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~  184 (683)
                      + ...+..+.              ..+       ..++|+|||+.+++++.+      ..|.+|++.+++....   .. 
T Consensus        91 ~-~~~lt~~~--------------~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l---~~-  151 (1045)
T 1k32_A           91 E-IKRITYFS--------------GKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL---NL-  151 (1045)
T ss_dssp             E-EEECCCCC--------------EEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC---CS-
T ss_pred             C-eEEcccCC--------------CcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEe---cC-
Confidence            5 34444443              334       789999999977777654      3588888877753221   11 


Q ss_pred             CCCeeEEEEcCCCCeEEEEecCC----------ceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeE
Q psy15995        185 GGPIKDIAWSPDNQRMVVVGEGR----------ERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTI  254 (683)
Q Consensus       185 ~~~i~~~~~s~~~~~l~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i  254 (683)
                       .....++|+| | .++++....          .....+|....+.....+.+|...+.++.|+++ . ++++++.++.+
T Consensus       152 -~~~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~-l~~~~~~dg~~  226 (1045)
T 1k32_A          152 -GPATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-R-IYFITDIDGFG  226 (1045)
T ss_dssp             -CSCSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-E-EEEEECTTSSC
T ss_pred             -CCcceeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-E-EEEEEeccCce
Confidence             2345778999 8 666654211          112456665544566677999999999999998 3 57778888999


Q ss_pred             EEEcCCC-CceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCc---------cccCeEEEEE
Q psy15995        255 AVFEGPP-FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPA---------HKGGVYAVAW  324 (683)
Q Consensus       255 ~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~---------~~~~i~~~~~  324 (683)
                      .+|.... +.....+..|. .+...+|+|+|+.|+.+. ++.|++|++...... .+....         |...+.+++|
T Consensus       227 ~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~  303 (1045)
T 1k32_A          227 QIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDF  303 (1045)
T ss_dssp             EEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEE
T ss_pred             EEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCceEee-eeccCcccccccccccccccceeee
Confidence            9997653 33444555554 466779999999888874 899999998544433 443211         3446899999


Q ss_pred             c-cCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEE-EEecCCCCcceeeeeecc
Q psy15995        325 K-PDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFIS-YLDVNNPSTPIRVIKGHN  402 (683)
Q Consensus       325 ~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~-~~~~~~~~~~~~~~~~~~  402 (683)
                      + |||+.+++++ ++.+.+|+...+.... +..........+.++ +++.++.++.++.+. +|+.....  ...+.+|.
T Consensus       304 S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~--~~~l~~~~  378 (1045)
T 1k32_A          304 SPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK--AEKFEENL  378 (1045)
T ss_dssp             EECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC--EEECCCCC
T ss_pred             cCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC--ceEecCCc
Confidence            9 9999999887 7899999998776443 211122245566677 888888888888888 88987633  23334778


Q ss_pred             ccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCce
Q psy15995        403 KPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEV  482 (683)
Q Consensus       403 ~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~  482 (683)
                      ..+..++|+|||++|++++.++.|++||+.+++...... .                                       
T Consensus       379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~-~---------------------------------------  418 (1045)
T 1k32_A          379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER-S---------------------------------------  418 (1045)
T ss_dssp             CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-C---------------------------------------
T ss_pred             cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc-C---------------------------------------
Confidence            899999999999999999999999999998776543321 1                                       


Q ss_pred             ecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCC----------cEEEEEcCC
Q psy15995        483 KLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADS----------KVHIYELNN  552 (683)
Q Consensus       483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg----------~i~i~d~~~  552 (683)
                                                           +...+..++|+||+++|++++.++          .|++||+.+
T Consensus       419 -------------------------------------~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~  461 (1045)
T 1k32_A          419 -------------------------------------REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG  461 (1045)
T ss_dssp             -------------------------------------SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred             -------------------------------------CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence                                                 122457789999999998887654          899999998


Q ss_pred             CccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCcc----------------------------------
Q psy15995        553 KSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFEL----------------------------------  598 (683)
Q Consensus       553 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~----------------------------------  598 (683)
                      ++..  ....+...+..++|+|||++|++++.++...+|+......                                  
T Consensus       462 g~~~--~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  539 (1045)
T 1k32_A          462 RKIF--AATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGE  539 (1045)
T ss_dssp             TEEE--ECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCC
T ss_pred             CcEE--EeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCcccccccc
Confidence            7632  3334777788999999999999998877766665432211                                  


Q ss_pred             -------ccccceeeecccEEEEEecCCCCeEEE-------------eecCCcEEEEeCCCCceeeEeecCCCCCCeeEE
Q psy15995        599 -------AHNKEWGFHSAKVNCVAWSPDSALVAS-------------GSLDTTIIIWSLASPAKHIIIKNAHPQSQITRL  658 (683)
Q Consensus       599 -------~~~~~~~~h~~~v~~~~~s~d~~~l~~-------------~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l  658 (683)
                             .....+..|.+.+..++++||++++++             ...+..|.+||+.+++.....      ..+.++
T Consensus       540 ~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~------~~v~~~  613 (1045)
T 1k32_A          540 YDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK------NNLTDL  613 (1045)
T ss_dssp             CCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE------EEEEEE
T ss_pred             ccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEee------cCcceE
Confidence                   000111225677899999999988875             123457889999887754332      458899


Q ss_pred             EEc-cCCeEEEeeCCCcEEEEeecc
Q psy15995        659 QWL-DNDLLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       659 ~~~-~~~~l~s~~~d~~v~vw~~~~  682 (683)
                      +|+ |++.|++++.| .+++|+++.
T Consensus       614 ~~S~DG~~l~~~~~~-~i~~~d~~~  637 (1045)
T 1k32_A          614 RLSADRKTVMVRKDD-GKIYTFPLE  637 (1045)
T ss_dssp             EECTTSCEEEEEETT-SCEEEEESS
T ss_pred             EECCCCCEEEEEcCC-cEEEEeCcc
Confidence            999 78899988876 799999853

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=6.5e-40  Score=312.26  Aligned_cols=292  Identities=18%  Similarity=0.335  Sum_probs=249.7

Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEe
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD  300 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  300 (683)
                      ....+.+|...|++++|+|++++ +++++.||.|++|+..+++....+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus        15 ~~~~~~gh~~~v~~~~~s~~~~~-l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd   93 (312)
T 4ery_A           15 LKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD   93 (312)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEcccCCcEEEEEECCCCCE-EEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEE
Confidence            44567899999999999999995 99999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecC
Q psy15995        301 GASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS  380 (683)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  380 (683)
                      +++++.+..+..  |...|.+++|+|++++|++++.|+.|++||+++++.+..                           
T Consensus        94 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~---------------------------  144 (312)
T 4ery_A           94 VSSGKCLKTLKG--HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT---------------------------  144 (312)
T ss_dssp             TTTCCEEEEEEC--CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE---------------------------
T ss_pred             CCCCcEEEEEcC--CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEE---------------------------
Confidence            999999888875  999999999999999999999999999999988765433                           


Q ss_pred             CcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEE
Q psy15995        381 GFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYT  460 (683)
Q Consensus       381 g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  460 (683)
                                       +..|..+|.+++|+|+++++++++.||.|++||+.+++........+                
T Consensus       145 -----------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~----------------  191 (312)
T 4ery_A          145 -----------------LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD----------------  191 (312)
T ss_dssp             -----------------ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSS----------------
T ss_pred             -----------------ecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccC----------------
Confidence                             35678899999999999999999999999999998776544332111                


Q ss_pred             EEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEc
Q psy15995        461 CGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGG  540 (683)
Q Consensus       461 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  540 (683)
                                                                                  ...+..++++|++++|++++
T Consensus       192 ------------------------------------------------------------~~~~~~~~~~~~~~~l~~~~  211 (312)
T 4ery_A          192 ------------------------------------------------------------NPPVSFVKFSPNGKYILAAT  211 (312)
T ss_dssp             ------------------------------------------------------------CCCEEEEEECTTSSEEEEEE
T ss_pred             ------------------------------------------------------------CCceEEEEECCCCCEEEEEc
Confidence                                                                        12356788999999999999


Q ss_pred             CCCcEEEEEcCCCccCcceeecCCcC---eeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEec
Q psy15995        541 ADSKVHIYELNNKSLSPKAELDHLGP---VTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWS  617 (683)
Q Consensus       541 ~dg~i~i~d~~~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s  617 (683)
                      .|+.|++||+.+++...... +|...   +......+++++|++++.||.|++||+.+++....  +.+|...|.+++|+
T Consensus       212 ~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~  288 (312)
T 4ery_A          212 LDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK--LQGHTDVVISTACH  288 (312)
T ss_dssp             TTTEEEEEETTTTEEEEEEC-SSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEE--ECCCSSCEEEEEEC
T ss_pred             CCCeEEEEECCCCcEEEEEE-ecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhh--hhccCCcEEEEeec
Confidence            99999999998887653332 34333   23333446899999999999999999999887644  34499999999999


Q ss_pred             CCCCeEEEee--cCCcEEEEeCC
Q psy15995        618 PDSALVASGS--LDTTIIIWSLA  638 (683)
Q Consensus       618 ~d~~~l~~~~--~d~~v~iw~~~  638 (683)
                      |++++|++++  .|++|++|+.+
T Consensus       289 p~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          289 PTENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             SSSSEEEEEECTTTCCEEEEECC
T ss_pred             CcCCceEEEEccCCccEEEecCC
Confidence            9999999987  69999999964

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=9e-40  Score=316.11  Aligned_cols=321  Identities=12%  Similarity=0.147  Sum_probs=276.9

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCc
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISG  163 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~  163 (683)
                      |.++|.+++|+|||++++++..++.+.+|+............|.              ..|.+++|+|++++|++++ ||
T Consensus         8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~~~~~l~~~~-dg   72 (337)
T 1gxr_A            8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHG--------------EVVCAVTISNPTRHVYTGG-KG   72 (337)
T ss_dssp             EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCS--------------SCCCEEEECSSSSEEEEEC-BS
T ss_pred             cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCC--------------CceEEEEEecCCcEEEEcC-CC
Confidence            57789999999999999998888777777665554333333333              7899999999999999999 99


Q ss_pred             cEEEEeccccceeee---ccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC--ceeeeecCCcCeEEEEee
Q psy15995        164 KVRIWDTVNKEHILK---NEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT--SVGEISGQSKPINSCDFK  238 (683)
Q Consensus       164 ~i~iwd~~~~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~  238 (683)
                      .|++||+.+++....   .....+...|.+++|+|+++++++++.++.  +.+|+.++++  ....+..|...|.+++|+
T Consensus        73 ~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~  150 (337)
T 1gxr_A           73 CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST--LSIWDLAAPTPRIKAELTSSAPACYALAIS  150 (337)
T ss_dssp             EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSE--EEEEECCCC--EEEEEEECSSSCEEEEEEC
T ss_pred             eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCc--EEEEECCCCCcceeeecccCCCceEEEEEC
Confidence            999999988653322   222357789999999999999999887654  7888888877  667788999999999999


Q ss_pred             cCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccC
Q psy15995        239 PSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGG  318 (683)
Q Consensus       239 ~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~  318 (683)
                      |+++. +++++.|+.|++||+++++....+..|...|.+++|+|++++|++++.||.|++||+++++.+..+.   +...
T Consensus       151 ~~~~~-l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---~~~~  226 (337)
T 1gxr_A          151 PDSKV-CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD---FTSQ  226 (337)
T ss_dssp             TTSSE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---CSSC
T ss_pred             CCCCE-EEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec---CCCc
Confidence            99985 9999999999999999999999999999999999999999999999999999999999999888775   7788


Q ss_pred             eEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeee
Q psy15995        319 VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI  398 (683)
Q Consensus       319 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~  398 (683)
                      +.+++|+|+++++++++.++.+++||+.+++..                                             .+
T Consensus       227 v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~---------------------------------------------~~  261 (337)
T 1gxr_A          227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY---------------------------------------------QL  261 (337)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEETTSSCEE---------------------------------------------EE
T ss_pred             eEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE---------------------------------------------EE
Confidence            999999999999999999999999999876532                                             23


Q ss_pred             eeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe--CCeEEEEEcCCeEEEEeC
Q psy15995        399 KGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDL  472 (683)
Q Consensus       399 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~~~~  472 (683)
                      ..|...|.+++|+|++++|++++.||.|++||+.+++.....  .|...+.++.+.  ++++++++.|+.|++|++
T Consensus       262 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          262 HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS--KESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             cCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe--cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence            457889999999999999999999999999999998877443  478889999987  789999999999999986

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.6e-40  Score=315.39  Aligned_cols=300  Identities=15%  Similarity=0.219  Sum_probs=233.7

Q ss_pred             CCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc--cccccccccCCCCcccceeeeeecceeeeEeec
Q psy15995         74 NPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE--HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS  151 (683)
Q Consensus        74 ~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  151 (683)
                      +.+++..+++|.++|.+++|+|+  +||+|+.|++|++||+.++.  ....+...            .+...|.+++|+|
T Consensus         3 ~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~------------~h~~~v~~v~~sp   68 (330)
T 2hes_X            3 SINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDET------------AHKKAIRSVAWRP   68 (330)
T ss_dssp             CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTT------------CCCSCEEEEEECT
T ss_pred             ccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecC------------CccCCEEEEEECC
Confidence            44567789999999999999998  99999999999999998753  22222110            0226799999999


Q ss_pred             cceEEEeecCCccEEEEeccccc-----eeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCC----Cce
Q psy15995        152 IGFYIASGDISGKVRIWDTVNKE-----HILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG----TSV  222 (683)
Q Consensus       152 ~~~~l~~~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~----~~~  222 (683)
                      ++++||+++.|++|++||+....     ......+..|...|.+++|+|++++|++++.++.  +.+|+.+..    +.+
T Consensus        69 ~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~--v~iwd~~~~~~~~~~~  146 (330)
T 2hes_X           69 HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKS--VWIWETDESGEEYECI  146 (330)
T ss_dssp             TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSC--EEEEECCTTCCCCEEE
T ss_pred             CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCE--EEEEeccCCCCCeEEE
Confidence            99999999999999999986431     1123446678899999999999999999987764  788888432    456


Q ss_pred             eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC--ceeeeccccccCeEEEEECCC--CCEEEEEcCCCcEEE
Q psy15995        223 GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF--KFKMTKQEHSRFVQAVRYSPS--GSHFASAGFDGKVFL  298 (683)
Q Consensus       223 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i  298 (683)
                      ..+.+|...|.+++|+|++.. |++++.|++|++||..++  +.+..+.+|...|.+++|+|+  +..|++++.|++|++
T Consensus       147 ~~~~~h~~~v~~v~~~p~~~~-l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~i  225 (330)
T 2hes_X          147 SVLQEHSQDVKHVIWHPSEAL-LASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRV  225 (330)
T ss_dssp             EEECCCSSCEEEEEECSSSSE-EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEE
T ss_pred             EEeccCCCceEEEEECCCCCE-EEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEE
Confidence            778899999999999999985 999999999999998766  577888999999999999998  678999999999999


Q ss_pred             EeCCCC--------eeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEec
Q psy15995        299 YDGASA--------DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ  370 (683)
Q Consensus       299 w~~~~~--------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (683)
                      ||+..+        .....+. ..|...|.+++|++++ +|++++.||.|++||..+++....                 
T Consensus       226 w~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~-----------------  286 (330)
T 2hes_X          226 WKYMGDDEDDQQEWVCEAILP-DVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVF-----------------  286 (330)
T ss_dssp             EEEEEECTTSCEEEEEEEECC-SCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEE-----------------
T ss_pred             EEecCCCccccceeEEeeecc-cccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEE-----------------
Confidence            998654        2333332 1388899999999765 899999999999999865532100                 


Q ss_pred             CCEEEEEecCCcEEEEecCCCCcceeeeeeccc-cEEEEEEeC--CCCEEEEEeCCCcEEEEcCCC
Q psy15995        371 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNK-PITALALSP--DRGTVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       371 ~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~l~~~~~dg~i~~w~~~~  433 (683)
                                              .....+|.. .|.+++|+|  ++++|++++.||.|++|+++.
T Consensus       287 ------------------------~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          287 ------------------------AKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             ------------------------EEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred             ------------------------eccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence                                    011245766 899999999  789999999999999999864

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=7.4e-40  Score=316.97  Aligned_cols=317  Identities=21%  Similarity=0.314  Sum_probs=251.6

Q ss_pred             EEEEeC--CCCcccccccCcccceEEEEECCC-CcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecc
Q psy15995         67 VIIRNI--ENPAISDIYTEHSCAVNVAKYSPS-GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTS  143 (683)
Q Consensus        67 i~v~~~--~~~~~~~~~~~h~~~v~~~~~s~d-~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (683)
                      ++++..  ++.++..+|+||++.|++++|+|+ +++||||+.|++|+|||+.+.+.........         ...+...
T Consensus        18 ~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~---------l~~h~~~   88 (340)
T 4aow_A           18 LYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRA---------LRGHSHF   88 (340)
T ss_dssp             --------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEE---------ECCCSSC
T ss_pred             EEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEE---------EeCCCCC
Confidence            444443  344566779999999999999997 6899999999999999998765322211110         0012278


Q ss_pred             eeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC-ce
Q psy15995        144 IRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT-SV  222 (683)
Q Consensus       144 i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~-~~  222 (683)
                      |.+++|+|++++|++++.|+.|++|+.........  ...+...+..+.+++++.++++++.++.  +.+|+..... ..
T Consensus        89 V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~s~s~d~~--~~~~d~~~~~~~~  164 (340)
T 4aow_A           89 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR--FVGHTKDVLSVAFSSDNRQIVSGSRDKT--IKLWNTLGVCKYT  164 (340)
T ss_dssp             EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSSCEEEEETTSC--EEEECTTSCEEEE
T ss_pred             EEEEEECCCCCEEEEEcccccceEEeecccceeee--ecCCCCceeEEEEeecCccceeecCCCe--EEEEEeCCCceEE
Confidence            99999999999999999999999999998765433  3445578899999999999999887754  5677765443 34


Q ss_pred             eeeecCCcCeEEEEeecCCCe-EEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeC
Q psy15995        223 GEISGQSKPINSCDFKPSRPF-RIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDG  301 (683)
Q Consensus       223 ~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  301 (683)
                      ....+|...+..++|++++.. .+++++.|+.|++||.++++....+.+|...|.+++|+|++++|++++.||.|++||+
T Consensus       165 ~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~  244 (340)
T 4aow_A          165 VQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL  244 (340)
T ss_dssp             ECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred             EEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEe
Confidence            456789999999999987643 4788999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCC
Q psy15995        302 ASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSG  381 (683)
Q Consensus       302 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g  381 (683)
                      .+.+.+..+.   +...+.+++|+|++. +++++.|+.|++||++++..+..+..                         
T Consensus       245 ~~~~~~~~~~---~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~-------------------------  295 (340)
T 4aow_A          245 NEGKHLYTLD---GGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQ-------------------------  295 (340)
T ss_dssp             TTTEEEEEEE---CSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECC-------------------------
T ss_pred             ccCceeeeec---CCceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccc-------------------------
Confidence            9999988876   557899999999876 55666799999999998876655421                         


Q ss_pred             cEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCC
Q psy15995        382 FISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE  435 (683)
Q Consensus       382 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~  435 (683)
                                ........+|...|++++|+|++++|++|+.||.|++||+++|.
T Consensus       296 ----------~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          296 ----------EVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             ----------C-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             ----------cceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence                      11123345789999999999999999999999999999998875

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=9.2e-40  Score=314.88  Aligned_cols=288  Identities=13%  Similarity=0.195  Sum_probs=237.8

Q ss_pred             ccCCCeEEEee-----CC-CCCeEEEe-cCCeEEEEeCCCC-------cccccccCcccceEEEEECCCCcEEEEecCCC
Q psy15995         42 TQRGQPIVLGG-----DP-KGKNFLYT-NGNSVIIRNIENP-------AISDIYTEHSCAVNVAKYSPSGFYIASGDISG  107 (683)
Q Consensus        42 ~~~~~~~~~~~-----s~-~~~~l~~~-~~~~i~v~~~~~~-------~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg  107 (683)
                      .+.+.+.+++|     +| |+++|+++ .|+.|++||+.+.       .....+.+|...|++++|+|++++|++++.|+
T Consensus        19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~   98 (343)
T 2xzm_R           19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDK   98 (343)
T ss_dssp             CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTS
T ss_pred             cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCC
Confidence            45678999998     77 99999988 5899999998754       34567889999999999999999999999999


Q ss_pred             CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCC
Q psy15995        108 KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGP  187 (683)
Q Consensus       108 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  187 (683)
                      +|++||+.+++.+..+..|.              ..|.+++|+|++++|++++.|++|++||+.............|...
T Consensus        99 ~v~lwd~~~~~~~~~~~~h~--------------~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~  164 (343)
T 2xzm_R           99 TLRLWDLRTGTTYKRFVGHQ--------------SEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDW  164 (343)
T ss_dssp             EEEEEETTSSCEEEEEECCC--------------SCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSC
T ss_pred             cEEEEECCCCcEEEEEcCCC--------------CcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCce
Confidence            99999999998887777665              7899999999999999999999999999985443333334467789


Q ss_pred             eeEEEEcCCC----------CeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEE
Q psy15995        188 IKDIAWSPDN----------QRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVF  257 (683)
Q Consensus       188 i~~~~~s~~~----------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw  257 (683)
                      |.+++|+|++          .++++++.++.  +.+|+ ..++....+.+|...|.+++|+|++++ |++++.|+.|++|
T Consensus       165 v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~--i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~-l~sgs~dg~v~iw  240 (343)
T 2xzm_R          165 VSCVRYSPIMKSANKVQPFAPYFASVGWDGR--LKVWN-TNFQIRYTFKAHESNVNHLSISPNGKY-IATGGKDKKLLIW  240 (343)
T ss_dssp             EEEEEECCCCCSCSCCCSSCCEEEEEETTSE--EEEEE-TTTEEEEEEECCSSCEEEEEECTTSSE-EEEEETTCEEEEE
T ss_pred             eeeeeeccccccccccCCCCCEEEEEcCCCE--EEEEc-CCCceeEEEcCccccceEEEECCCCCE-EEEEcCCCeEEEE
Confidence            9999999987          67888777653  67887 445667788999999999999999996 9999999999999


Q ss_pred             cCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEE--eccC---------CccccCeEEEEEcc
Q psy15995        258 EGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVS--ELGN---------PAHKGGVYAVAWKP  326 (683)
Q Consensus       258 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~---------~~~~~~i~~~~~~~  326 (683)
                      |+...........+...|.+++|+|++++++++ .|+.|++|++.+++...  .+..         .+|...|.+++|+|
T Consensus       241 d~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp  319 (343)
T 2xzm_R          241 DILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNA  319 (343)
T ss_dssp             ESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECS
T ss_pred             ECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECC
Confidence            985433322223355679999999999887755 58889999998776543  3321         14778899999999


Q ss_pred             CCCEEEEEECCCcEEEEECCCC
Q psy15995        327 DGTQLLTASGDKTCKLWDIETK  348 (683)
Q Consensus       327 ~~~~l~~~~~dg~i~iwd~~~~  348 (683)
                      ++++|++++.||.|++|+++++
T Consensus       320 ~g~~l~sg~~Dg~v~~w~~~~g  341 (343)
T 2xzm_R          320 LGKKLFAGFTDGVIRTFSFETS  341 (343)
T ss_dssp             SSCCEEEEETTSEEEEEEEEEE
T ss_pred             CCCeEEEecCCceEEEEEEEcc
Confidence            9999999999999999998654

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=9e-40  Score=326.21  Aligned_cols=326  Identities=10%  Similarity=0.145  Sum_probs=274.0

Q ss_pred             cceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccE
Q psy15995         86 CAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKV  165 (683)
Q Consensus        86 ~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i  165 (683)
                      ..+++++|+|+|++|++++.|+.|++||+.+++....+..+               ..+....+++++++|++++.||.|
T Consensus        57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~~~dg~i  121 (420)
T 3vl1_A           57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA---------------DYTAVDTAKLQMRRFILGTTEGDI  121 (420)
T ss_dssp             BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC---------------CEEEEEEECSSSCEEEEEETTSCE
T ss_pred             ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC---------------CceEEEEEecCCCEEEEEECCCCE
Confidence            34568999999999999999999999999988766554433               334455789999999999999999


Q ss_pred             EEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEE
Q psy15995        166 RIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRI  245 (683)
Q Consensus       166 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  245 (683)
                      ++||+.+++..  ..+..|.+.|.+++|+|+++++++++.++.  +.+|+.++++.+..+.+|...|.+++|+|+++. |
T Consensus       122 ~iwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~--i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l  196 (420)
T 3vl1_A          122 KVLDSNFNLQR--EIDQAHVSEITKLKFFPSGEALISSSQDMQ--LKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRN-V  196 (420)
T ss_dssp             EEECTTSCEEE--EETTSSSSCEEEEEECTTSSEEEEEETTSE--EEEEETTTCCCCEEEECCSSCEEEEEEETTTTE-E
T ss_pred             EEEeCCCccee--eecccccCccEEEEECCCCCEEEEEeCCCe--EEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCE-E
Confidence            99999987754  344578899999999999999999887754  789999999999999999999999999999995 9


Q ss_pred             EEeeCCCeEEEEcCCCCceeeeccc---ccc---------------------CeEEEEECCCCCEEEEEcCCCcEEEEeC
Q psy15995        246 ITGSEDNTIAVFEGPPFKFKMTKQE---HSR---------------------FVQAVRYSPSGSHFASAGFDGKVFLYDG  301 (683)
Q Consensus       246 ~~~~~d~~i~iw~~~~~~~~~~~~~---~~~---------------------~v~~~~~~~~~~~l~~~~~dg~i~iw~~  301 (683)
                      ++++.|+.|++||+++++....+..   |..                     .+.+++|+|++++|++++.||.|++||+
T Consensus       197 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~  276 (420)
T 3vl1_A          197 LSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNV  276 (420)
T ss_dssp             EEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEET
T ss_pred             EEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEEC
Confidence            9999999999999999998888764   333                     4444556889999999999999999999


Q ss_pred             CCCeeEEeccCCccccCeEEEEEccCCC-EEEEEECCCcEEEEECCCCce-eeEEEecCcceeceEEEEecCCEEEEEec
Q psy15995        302 ASADLVSELGNPAHKGGVYAVAWKPDGT-QLLTASGDKTCKLWDIETKSV-VSEFIMGNQVEDQQVSCLWQGDYLLTVSL  379 (683)
Q Consensus       302 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  379 (683)
                      ++++....+.. .|...|.+++|+|+++ +|++++.||.|++||+++++. +..+...+......+ ..++++++++++.
T Consensus       277 ~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~s~~~  354 (420)
T 3vl1_A          277 FSKEQTIQLPS-KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNV-YFAAGALFVSSGF  354 (420)
T ss_dssp             TTCCEEEEECC-TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE-EEETTEEEEEETT
T ss_pred             CCCceeEEccc-ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE-EeCCCCEEEEecC
Confidence            99988777653 4788999999999998 999999999999999998754 566655455555555 5568889999999


Q ss_pred             CCcEEEEecCCCCcc--------eeeeeeccccEEEEEEeCCCC---EEEEEeCCCcEEEEcCCC
Q psy15995        380 SGFISYLDVNNPSTP--------IRVIKGHNKPITALALSPDRG---TVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       380 ~g~i~~~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~---~l~~~~~dg~i~~w~~~~  433 (683)
                      |+.+++|++.....+        ...+..|...|.+++|+|+++   .+++.+.+|.+.+|++..
T Consensus       355 d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~  419 (420)
T 3vl1_A          355 DTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN  419 (420)
T ss_dssp             TEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred             CccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence            999999999874322        234567888999999999999   788888899999999864

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=3.4e-38  Score=305.26  Aligned_cols=298  Identities=20%  Similarity=0.337  Sum_probs=244.2

Q ss_pred             CCCCceeeeccccccCeEEEEECCC-CCEEEEEcCCCcEEEEeCCCCe-----eEEeccCCccccCeEEEEEccCCCEEE
Q psy15995        259 GPPFKFKMTKQEHSRFVQAVRYSPS-GSHFASAGFDGKVFLYDGASAD-----LVSELGNPAHKGGVYAVAWKPDGTQLL  332 (683)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~  332 (683)
                      .++.++..++++|.+.|++++|+|+ +++|++|+.|++|++||+.+.+     ....+.  +|...|.+++|+|++++|+
T Consensus        25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~--~h~~~V~~~~~s~dg~~l~  102 (340)
T 4aow_A           25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR--GHSHFVSDVVISSDGQFAL  102 (340)
T ss_dssp             -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEEC--CCSSCEEEEEECTTSSEEE
T ss_pred             CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEe--CCCCCEEEEEECCCCCEEE
Confidence            4445566789999999999999998 5799999999999999987654     344554  4999999999999999999


Q ss_pred             EEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeC
Q psy15995        333 TASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSP  412 (683)
Q Consensus       333 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  412 (683)
                      +++.|+.+++|+.........                                            ...+...+....+++
T Consensus       103 s~~~d~~i~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~  138 (340)
T 4aow_A          103 SGSWDGTLRLWDLTTGTTTRR--------------------------------------------FVGHTKDVLSVAFSS  138 (340)
T ss_dssp             EEETTSEEEEEETTTTEEEEE--------------------------------------------EECCSSCEEEEEECT
T ss_pred             EEcccccceEEeecccceeee--------------------------------------------ecCCCCceeEEEEee
Confidence            999999999999987655432                                            234566788889999


Q ss_pred             CCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe----CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCC
Q psy15995        413 DRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT----GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQP  488 (683)
Q Consensus       413 ~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~  488 (683)
                      +++++++++.|+.+++||+............|...+..+.+.    ...+++++.|+.|++||+.+....          
T Consensus       139 ~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~----------  208 (340)
T 4aow_A          139 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK----------  208 (340)
T ss_dssp             TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEE----------
T ss_pred             cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCcee----------
Confidence            999999999999999999988777777667889999999886    457889999999999999875321          


Q ss_pred             ceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCee
Q psy15995        489 RGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVT  568 (683)
Q Consensus       489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~  568 (683)
                                                .....+...+.+++++|++++|++++.|+.|++||+.+.+.....  .+...+.
T Consensus       209 --------------------------~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~--~~~~~v~  260 (340)
T 4aow_A          209 --------------------------TNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL--DGGDIIN  260 (340)
T ss_dssp             --------------------------EEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE--ECSSCEE
T ss_pred             --------------------------eEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee--cCCceEE
Confidence                                      111235567899999999999999999999999999988766333  4667899


Q ss_pred             EEEECCCCCEEEEEeCCCeEEEEECCCCcccccc-------ceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCc
Q psy15995        569 DCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNK-------EWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPA  641 (683)
Q Consensus       569 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~-------~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~  641 (683)
                      +++|+|++.+++ ++.|+.|++||+.++......       ...+|...|++++|+||+++|++|+.||.|+|||+++|+
T Consensus       261 ~~~~~~~~~~~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          261 ALCFSPNRYWLC-AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             EEEECSSSSEEE-EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             eeecCCCCceee-ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence            999999876554 556999999999887654322       223488999999999999999999999999999999876

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.6e-38  Score=307.80  Aligned_cols=308  Identities=17%  Similarity=0.276  Sum_probs=258.1

Q ss_pred             cccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEE
Q psy15995         78 SDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIA  157 (683)
Q Consensus        78 ~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  157 (683)
                      ...+.+|.+.|++++|+|++++||+++.||.|++||+.+++.+..+..|.              ..|.+++|+|++++|+
T Consensus        25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~--------------~~v~~~~~~~~~~~l~   90 (369)
T 3zwl_B           25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHT--------------GTIWSIDVDCFTKYCV   90 (369)
T ss_dssp             EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCS--------------SCEEEEEECTTSSEEE
T ss_pred             cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcC--------------CcEEEEEEcCCCCEEE
Confidence            34588999999999999999999999999999999999998888777665              7899999999999999


Q ss_pred             eecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecC---CceEEEEEEccCCC-----------cee
Q psy15995        158 SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEG---RERFGHVFMSETGT-----------SVG  223 (683)
Q Consensus       158 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~---~~~~~~~~~~~~~~-----------~~~  223 (683)
                      +++.||.|++||+.+++.+....   +...+.+++|+|+++++++++.+   ....+.+|+...+.           ...
T Consensus        91 s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~  167 (369)
T 3zwl_B           91 TGSADYSIKLWDVSNGQCVATWK---SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIH  167 (369)
T ss_dssp             EEETTTEEEEEETTTCCEEEEEE---CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred             EEeCCCeEEEEECCCCcEEEEee---cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceee
Confidence            99999999999999988765544   56899999999999999998875   11237888887653           344


Q ss_pred             eeecCCc--CeEEEEeecCCCeEEEEeeCCCeEEEEcCCC-CceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEe
Q psy15995        224 EISGQSK--PINSCDFKPSRPFRIITGSEDNTIAVFEGPP-FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD  300 (683)
Q Consensus       224 ~~~~~~~--~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  300 (683)
                      .+..|..  .+.+++|+|+++. +++++.||.|++||+.+ .+....+..|...|.+++|+|++++|++++.||.|++||
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d  246 (369)
T 3zwl_B          168 KIITHEGLDAATVAGWSTKGKY-IIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVD  246 (369)
T ss_dssp             EEECCTTCCCEEEEEECGGGCE-EEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             eccCCcCccceeEEEEcCCCCE-EEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEE
Confidence            5566666  9999999999995 99999999999999998 788888899999999999999999999999999999999


Q ss_pred             CCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecC
Q psy15995        301 GASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS  380 (683)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  380 (683)
                      +.+++.+..+.   +...+..++|+|+++++++++.++...+|......                             ..
T Consensus       247 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----------------------------~~  294 (369)
T 3zwl_B          247 VSTLQVLKKYE---TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANE-----------------------------GK  294 (369)
T ss_dssp             TTTCCEEEEEE---CSSCEEEEEECSSSSEEEEEECCC------------------------------------------
T ss_pred             CCCCceeeeec---CCCCceeEEecCCCceEEEeecCCCceEEEEecCC-----------------------------Cc
Confidence            99999988886   77889999999999999999999866665543221                             11


Q ss_pred             CcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCc
Q psy15995        381 GFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEN  436 (683)
Q Consensus       381 g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~  436 (683)
                      ..+++||... ......+.+|...|++++|+|++++|++++.||.|++|++..+..
T Consensus       295 ~~i~~~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~  349 (369)
T 3zwl_B          295 FEARFYHKIF-EEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF  349 (369)
T ss_dssp             CEEEEEETTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred             ceeEEEecCC-CcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence            2456677665 345566788999999999999999999999999999999986543

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=7.8e-38  Score=316.23  Aligned_cols=331  Identities=17%  Similarity=0.228  Sum_probs=271.2

Q ss_pred             eEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccc
Q psy15995         47 PIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        47 ~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      +.++.+  ++++|+++ .++.|++||+.+++.+..+.+|.+.|++++|+|++ +|++|+.||+|++||+.+++.+..+..
T Consensus       125 ~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~  201 (464)
T 3v7d_B          125 ITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEG  201 (464)
T ss_dssp             EEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred             EEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECC
Confidence            455554  56788877 68999999999999999999999999999999998 999999999999999999988877766


Q ss_pred             ccCCCCcccceeeeeecceeeeEee--ccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEE
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVL--SIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV  203 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s--~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  203 (683)
                      |.              ..|.+++|+  +++.+|++++.|+.|++||+.+++........   .....+.+.|++.     
T Consensus       202 h~--------------~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~-----  259 (464)
T 3v7d_B          202 HN--------------STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEE---HDYPLVFHTPEEN-----  259 (464)
T ss_dssp             CS--------------SCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC---------CCSSEEESCGGGC-----
T ss_pred             CC--------------CccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccccccc---CCcceEeeccCCC-----
Confidence            65              778999998  57899999999999999999887644322211   1122222233221     


Q ss_pred             ecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCC
Q psy15995        204 GEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPS  283 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~  283 (683)
                                     ......+.+|...+.++  +++++ .+++++.|+.|++||+.+++.+..+.+|...|.+++|+|+
T Consensus       260 ---------------~~~~~~~~~~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~  321 (464)
T 3v7d_B          260 ---------------PYFVGVLRGHMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHE  321 (464)
T ss_dssp             ---------------TTEEEEECCCSSCEEEE--EEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT
T ss_pred             ---------------eEEEEEccCccceEEEE--cCCCC-EEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCC
Confidence                           22344567888888887  45566 4999999999999999999999999999999999999999


Q ss_pred             CCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceec
Q psy15995        284 GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQ  363 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  363 (683)
                      ++++++++.||.|++||+++++.+..+..  |...|.+++|+  ++++++++.||.|++||+.++......         
T Consensus       322 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~---------  388 (464)
T 3v7d_B          322 RKRCISASMDTTIRIWDLENGELMYTLQG--HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY---------  388 (464)
T ss_dssp             TTEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE---------
T ss_pred             CCEEEEEeCCCcEEEEECCCCcEEEEEeC--CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee---------
Confidence            99999999999999999999999999876  99999999997  579999999999999999876543221         


Q ss_pred             eEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCC
Q psy15995        364 QVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAG  443 (683)
Q Consensus       364 ~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~  443 (683)
                                                          .|...+..++++|+++++++++ ||.|++||+.+++........
T Consensus       389 ------------------------------------~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~  431 (464)
T 3v7d_B          389 ------------------------------------HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILK  431 (464)
T ss_dssp             ------------------------------------ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTT
T ss_pred             ------------------------------------cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhcc
Confidence                                                2455677789999999999998 899999999999998876677


Q ss_pred             CCcceeEEEEeCCeEEEEEc-CCeEEEE
Q psy15995        444 HGNQINGMKATGELLYTCGI-DDTIKQV  470 (683)
Q Consensus       444 ~~~~v~~~~~~~~~l~~~~~-d~~i~~~  470 (683)
                      +...|.++.++++.+++++. |+.+.+|
T Consensus       432 ~~~~v~~v~~~~~~l~~~~~~~g~~~i~  459 (464)
T 3v7d_B          432 DADQIWSVNFKGKTLVAAVEKDGQSFLE  459 (464)
T ss_dssp             TCSEEEEEEEETTEEEEEEEETTEEEEE
T ss_pred             CCCcEEEEEecCCEEEEEEEeCCeEEEE
Confidence            89999999999777766654 5544443

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-39  Score=324.31  Aligned_cols=353  Identities=10%  Similarity=0.068  Sum_probs=265.5

Q ss_pred             EeeCCCCCeEEEecCCeEEEEeCCCCcccccc-cCcccceEEEEECC-CCcEEEEecCCCCEEEEeCCCccccccccccc
Q psy15995         50 LGGDPKGKNFLYTNGNSVIIRNIENPAISDIY-TEHSCAVNVAKYSP-SGFYIASGDISGKVRIWDTVNKEHILKNEFHP  127 (683)
Q Consensus        50 ~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~-~~h~~~v~~~~~s~-d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~  127 (683)
                      ..|+|+++.++.+.     .|+ .+++.+..+ .+|.+.|++++|+| ++++||+|+.||+|+|||+.+.+.....    
T Consensus        33 ~~f~~~~~~~~~~~-----~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~----  102 (437)
T 3gre_A           33 KEFGPIQEIVRSPN-----MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVY----  102 (437)
T ss_dssp             GGGCCCCCCCCCCC-----GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCC----
T ss_pred             hhcCCccccccccc-----ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCccc----
Confidence            35899999988765     487 455666777 89999999999999 9999999999999999998762111000    


Q ss_pred             CCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEecc---cccee--------eeccccc--cCCCeeEEE--
Q psy15995        128 IGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTV---NKEHI--------LKNEFHP--IGGPIKDIA--  192 (683)
Q Consensus       128 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~---~~~~~--------~~~~~~~--~~~~i~~~~--  192 (683)
                           .......+...|.+++|+|++.+|++++.||.|++||+.   +++..        ....+..  +...+.++.  
T Consensus       103 -----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  177 (437)
T 3gre_A          103 -----SSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAF  177 (437)
T ss_dssp             -----SCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEE
T ss_pred             -----ceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEE
Confidence                 001111234789999999999999999999999999995   33322        2222222  456677777  


Q ss_pred             EcCCCCeEEEEecCCceEEEEEEccCCCceeeeec--CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc-
Q psy15995        193 WSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISG--QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ-  269 (683)
Q Consensus       193 ~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-  269 (683)
                      +++++.++++++.++.  +.+|+..+++.+..+.+  |...|++++|+|++.+ +++++.||.|++||+++++.+..+. 
T Consensus       178 ~~~~~~~l~~~~~d~~--i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~  254 (437)
T 3gre_A          178 VNEEKSLLVALTNLSR--VIIFDIRTLERLQIIENSPRHGAVSSICIDEECCV-LILGTTRGIIDIWDIRFNVLIRSWSF  254 (437)
T ss_dssp             ECSSCEEEEEEETTSE--EEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCE-EEEEETTSCEEEEETTTTEEEEEEBC
T ss_pred             EcCCCCEEEEEeCCCe--EEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCE-EEEEcCCCeEEEEEcCCccEEEEEec
Confidence            6688999999887754  78999999999999998  8999999999999985 9999999999999999999888875 


Q ss_pred             ccccCeEEEEEC----CCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC------------------------ccccCeEE
Q psy15995        270 EHSRFVQAVRYS----PSGSHFASAGFDGKVFLYDGASADLVSELGNP------------------------AHKGGVYA  321 (683)
Q Consensus       270 ~~~~~v~~~~~~----~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------------------------~~~~~i~~  321 (683)
                      .|...|.+++|+    |++.+|++++.||.|++||+++++.+..+...                        .|...|.+
T Consensus       255 ~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~  334 (437)
T 3gre_A          255 GDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALST  334 (437)
T ss_dssp             TTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCC
T ss_pred             CCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEE
Confidence            788899999665    46779999999999999999999877766531                        16677999


Q ss_pred             EEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcce--eceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeee
Q psy15995        322 VAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVE--DQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIK  399 (683)
Q Consensus       322 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~  399 (683)
                      ++|+ ++++|++++.|+.|++||+.+++....+.......  .......+...+++..        ++... ........
T Consensus       335 l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~  404 (437)
T 3gre_A          335 ISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK--------MKRTS-THSVDDSL  404 (437)
T ss_dssp             EEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE--------CC------------
T ss_pred             EEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe--------ccccc-ccccCccc
Confidence            9999 77899999999999999999998887775432211  1111222222222221        11211 22234456


Q ss_pred             eccccEEEEEEeCC--CCEEEEEeCCCcEEEEc
Q psy15995        400 GHNKPITALALSPD--RGTVFTGSHDGFITRWN  430 (683)
Q Consensus       400 ~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~w~  430 (683)
                      .|...|++++++++  +.+|++|+.||.|++|+
T Consensus       405 ~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          405 YHHDIINSISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             --CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             ccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence            69999999999998  78999999999999995

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.6e-38  Score=307.27  Aligned_cols=304  Identities=17%  Similarity=0.212  Sum_probs=259.8

Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeC
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDG  301 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  301 (683)
                      ...+.+|...|++++|+|++++ |++++.||.|++||+.+++....+.+|...|.+++|+|++++|++++.||.|++||+
T Consensus        25 ~~~l~~h~~~v~~~~~s~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  103 (369)
T 3zwl_B           25 AIKLTGHERPLTQVKYNKEGDL-LFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDV  103 (369)
T ss_dssp             EEEEECCSSCEEEEEECTTSCE-EEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred             cEEEEEeeceEEEEEEcCCCCE-EEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence            3457899999999999999995 999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeeEEeccCCccccCeEEEEEccCCCEEEEEECC-----CcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEE
Q psy15995        302 ASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD-----KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLT  376 (683)
Q Consensus       302 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  376 (683)
                      .+++.+..+.   +...+.+++|+|+++++++++.+     +.+++||+........+....                  
T Consensus       104 ~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~------------------  162 (369)
T 3zwl_B          104 SNGQCVATWK---SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVS------------------  162 (369)
T ss_dssp             TTCCEEEEEE---CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEEC------------------
T ss_pred             CCCcEEEEee---cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccc------------------
Confidence            9999988886   78899999999999999999998     999999998765443332111                  


Q ss_pred             EecCCcEEEEecCCCCcceeeeeeccc--cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC-CcceeccCCCCcceeEEEE
Q psy15995        377 VSLSGFISYLDVNNPSTPIRVIKGHNK--PITALALSPDRGTVFTGSHDGFITRWNAKTG-ENDRVQGAGHGNQINGMKA  453 (683)
Q Consensus       377 ~~~~g~i~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~-~~~~~~~~~~~~~v~~~~~  453 (683)
                                     ......+..|..  .+.+++|+|+++++++++.||.|++||+.+. +..... ..          
T Consensus       163 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~----------  216 (369)
T 3zwl_B          163 ---------------EEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSI-DL----------  216 (369)
T ss_dssp             ---------------SSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEE-EC----------
T ss_pred             ---------------cceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEE-ec----------
Confidence                           223344555666  8999999999999999999999999999873 222221 11          


Q ss_pred             eCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCC
Q psy15995        454 TGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEH  533 (683)
Q Consensus       454 ~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  533 (683)
                                                                                        +...+.+++++|++
T Consensus       217 ------------------------------------------------------------------~~~~v~~~~~~~~~  230 (369)
T 3zwl_B          217 ------------------------------------------------------------------HEKSISDMQFSPDL  230 (369)
T ss_dssp             ------------------------------------------------------------------CSSCEEEEEECTTS
T ss_pred             ------------------------------------------------------------------CCCceeEEEECCCC
Confidence                                                                              22356788999999


Q ss_pred             CEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCC--------------eEEEEECCCCccc
Q psy15995        534 GLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHR--------------KVVLYRVPDFELA  599 (683)
Q Consensus       534 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--------------~i~i~~~~~~~~~  599 (683)
                      ++|++++.|+.|++||+.+++......  +...+.+++|+|+++++++++.++              .+++||..+++..
T Consensus       231 ~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~  308 (369)
T 3zwl_B          231 TYFITSSRDTNSFLVDVSTLQVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI  308 (369)
T ss_dssp             SEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEE
T ss_pred             CEEEEecCCceEEEEECCCCceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch
Confidence            999999999999999999887764443  778999999999999999999888              8999999998876


Q ss_pred             cccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCcee
Q psy15995        600 HNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKH  643 (683)
Q Consensus       600 ~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~  643 (683)
                      ..  +.+|...|++++|+|++++|++++.||.|++|+++++...
T Consensus       309 ~~--~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~  350 (369)
T 3zwl_B          309 GR--VQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFD  350 (369)
T ss_dssp             EE--EECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHT
T ss_pred             hh--eecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccch
Confidence            54  3449999999999999999999999999999999876543

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=4.1e-37  Score=310.95  Aligned_cols=325  Identities=18%  Similarity=0.262  Sum_probs=272.1

Q ss_pred             ceeeeecCCcCe-EEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEE
Q psy15995        221 SVGEISGQSKPI-NSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLY  299 (683)
Q Consensus       221 ~~~~~~~~~~~v-~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  299 (683)
                      ....+.+|...+ .++.++  ++ .+++|+.||+|++||..+++....+.+|...|.+++|+|++ .+++++.||.|++|
T Consensus       113 ~~~~l~~h~~~v~~~~~~~--~~-~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw  188 (464)
T 3v7d_B          113 QRTTLRGHMTSVITCLQFE--DN-YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW  188 (464)
T ss_dssp             EEEEEECCSSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred             ceEEEcCCCCCcEEEEEEC--CC-EEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence            345678898885 566664  44 59999999999999999999999999999999999999988 89999999999999


Q ss_pred             eCCCCeeEEeccCCccccCeEEEEEc--cCCCEEEEEECCCcEEEEECCCCceeeEE--------------------Eec
Q psy15995        300 DGASADLVSELGNPAHKGGVYAVAWK--PDGTQLLTASGDKTCKLWDIETKSVVSEF--------------------IMG  357 (683)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--------------------~~~  357 (683)
                      |+++++.+..+..  |...|.+++|+  ++++++++++.|+.+++||+.++......                    ...
T Consensus       189 d~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (464)
T 3v7d_B          189 DIKKGCCTHVFEG--HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL  266 (464)
T ss_dssp             ETTTTEEEEEECC--CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred             ECCCCcEEEEECC--CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence            9999999988875  99999999998  57789999999999999999987644321                    111


Q ss_pred             CcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcc
Q psy15995        358 NQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEND  437 (683)
Q Consensus       358 ~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~  437 (683)
                      .........+.++++++++++.++.|++||+.. ...+..+.+|...|.+++|+|+++++++++.||.|++||+.+++..
T Consensus       267 ~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~  345 (464)
T 3v7d_B          267 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM  345 (464)
T ss_dssp             CCCSSCEEEEEEETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred             cCccceEEEEcCCCCEEEEEeCCCeEEEEECCC-CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence            222233445578999999999999999999987 5667778899999999999999999999999999999999998887


Q ss_pred             eeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeee
Q psy15995        438 RVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSS  517 (683)
Q Consensus       438 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (683)
                      ... .+|...|.++.++++++++++.|+.|++||+.+..                                     ....
T Consensus       346 ~~~-~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~-------------------------------------~~~~  387 (464)
T 3v7d_B          346 YTL-QGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYS-------------------------------------RKFS  387 (464)
T ss_dssp             EEE-CCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCC-------------------------------------EEEE
T ss_pred             EEE-eCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCc-------------------------------------eeee
Confidence            776 57999999999999999999999999999998642                                     2222


Q ss_pred             ecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEE
Q psy15995        518 LPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYR  592 (683)
Q Consensus       518 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~  592 (683)
                      ......+..++++++++++++++ ||.|++||+.+++........+...|.+++|+ +..++++++.++.+.+|-
T Consensus       388 ~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~  460 (464)
T 3v7d_B          388 YHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEI  460 (464)
T ss_dssp             EECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred             ecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEE
Confidence            33455678889999999999998 89999999999988866566789999999997 445556666777655543

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.8e-39  Score=323.04  Aligned_cols=343  Identities=12%  Similarity=0.069  Sum_probs=241.7

Q ss_pred             CCCeeEEEEcCCC---------CeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEE
Q psy15995        185 GGPIKDIAWSPDN---------QRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIA  255 (683)
Q Consensus       185 ~~~i~~~~~s~~~---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~  255 (683)
                      .+.|.+++|+|++         ++||++.....          .               -..+|+++. +++++.|++|+
T Consensus       133 ~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~----------~---------------~~~~~~~~~-laS~s~D~tI~  186 (524)
T 2j04_B          133 GGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYM----------D---------------EPLNEHLEM-FDKEKHSSCIQ  186 (524)
T ss_dssp             CC--CCCSCEEECCCCSSCSSEEEEEEEEEC--------------------------------------------CEEEE
T ss_pred             CCceeEEEecccCCCCccCcCCeEEEEEEeccc----------C---------------Cccchhhhh-hccCCCCceEE
Confidence            5889999999987         67887765421          0               013678874 89999999999


Q ss_pred             EEcCCCCcee----eeccccccCeEEEEECCC------CCEEEEEcCCCcEEEEeCCCCeeE-----------EeccCCc
Q psy15995        256 VFEGPPFKFK----MTKQEHSRFVQAVRYSPS------GSHFASAGFDGKVFLYDGASADLV-----------SELGNPA  314 (683)
Q Consensus       256 iw~~~~~~~~----~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~iw~~~~~~~~-----------~~~~~~~  314 (683)
                      +|++.+++..    ..+..|.+.|.+++|+|+      +.+||+++.||+|++||+.++...           ..+.  .
T Consensus       187 iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~--~  264 (524)
T 2j04_B          187 IFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLS--L  264 (524)
T ss_dssp             EEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEEC--C
T ss_pred             EEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEE--c
Confidence            9998777642    345667889999999997      579999999999999999876421           2333  3


Q ss_pred             cccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcc
Q psy15995        315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTP  394 (683)
Q Consensus       315 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~  394 (683)
                      |...|.+++|+++ ..|++|+.||+|++||++++..                                           +
T Consensus       265 h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~-------------------------------------------~  300 (524)
T 2j04_B          265 ADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEV-------------------------------------------P  300 (524)
T ss_dssp             TTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSS-------------------------------------------C
T ss_pred             CCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCC-------------------------------------------c
Confidence            8899999999986 4899999999999999986421                                           1


Q ss_pred             eeeeeeccccEEEE--EEeCCC-CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEe
Q psy15995        395 IRVIKGHNKPITAL--ALSPDR-GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVD  471 (683)
Q Consensus       395 ~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~  471 (683)
                      ...+.+|...|.++  +|+|++ .+|++++.|++|++||+++++...... +|.                          
T Consensus       301 ~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~-~~~--------------------------  353 (524)
T 2j04_B          301 SFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTV-SRF--------------------------  353 (524)
T ss_dssp             SEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEE-EEC--------------------------
T ss_pred             eEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccc-ccc--------------------------
Confidence            23457799999999  568887 899999999999999998765433221 010                          


Q ss_pred             CCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcC
Q psy15995        472 LSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELN  551 (683)
Q Consensus       472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~  551 (683)
                                                                      ....+.+++|+|+++.+++++.|++|++||+.
T Consensus       354 ------------------------------------------------~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~  385 (524)
T 2j04_B          354 ------------------------------------------------RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSR  385 (524)
T ss_dssp             ------------------------------------------------SCCSCCCEEEETTTTEEEEECSSSEEEEEETT
T ss_pred             ------------------------------------------------ccCcccceEeCCCcCeEEEeCCCCcEEEEECc
Confidence                                                            00135778999999999999999999999999


Q ss_pred             CCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccce---eeecccEEEEEecCCCCeEEEeec
Q psy15995        552 NKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEW---GFHSAKVNCVAWSPDSALVASGSL  628 (683)
Q Consensus       552 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~---~~h~~~v~~~~~s~d~~~l~~~~~  628 (683)
                      ++..... ..+|.+.|++++|+|++++|++|+.|++|++||+... .......   ..+...+.+++|+|+++.+.. ..
T Consensus       386 ~~~~~~~-l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~-~~  462 (524)
T 2j04_B          386 AAFAVHP-LVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYRI-DS  462 (524)
T ss_dssp             CTTCCEE-EEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEEE-CC
T ss_pred             cccccee-eecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEEc-cC
Confidence            8776533 3469999999999999999999999999999998764 2221110   002235789999999985532 22


Q ss_pred             CCcEEEEeCC-CCceeeEeecCCCCCCeeEEEEccC----CeEEEeeCCCcEEEEeec
Q psy15995        629 DTTIIIWSLA-SPAKHIIIKNAHPQSQITRLQWLDN----DLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       629 d~~v~iw~~~-~~~~~~~~~~~~~~~~v~~l~~~~~----~~l~s~~~d~~v~vw~~~  681 (683)
                        .+++|+.. ++.....+..  |...|.+|+|+++    ..+++|+.||.|+||+++
T Consensus       463 --~~~~~~~~~~g~~~~~l~g--h~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~  516 (524)
T 2j04_B          463 --SYEVYPLTVNDVSKAKIDA--HGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLS  516 (524)
T ss_dssp             --CCCCCC---------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred             --CceecccccCCcceeeecC--CCceEEEEECCCCCCccHHHHhhccCceEEEEEcc
Confidence              24445443 3455555544  7899999999943    389999999999999985

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=1.8e-37  Score=311.13  Aligned_cols=326  Identities=18%  Similarity=0.287  Sum_probs=278.9

Q ss_pred             CcccccccCcccce-EEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccc
Q psy15995         75 PAISDIYTEHSCAV-NVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIG  153 (683)
Q Consensus        75 ~~~~~~~~~h~~~v-~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  153 (683)
                      .+....+.+|.+.| ++  ++++|++|++|+.||.|++||+.+++.+..+..|.              ..|.+++++  +
T Consensus       108 ~~~~~~l~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~--------------~~v~~~~~~--~  169 (445)
T 2ovr_B          108 LKSPKVLKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT--------------GGVWSSQMR--D  169 (445)
T ss_dssp             CCCCEEEECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCS--------------SCEEEEEEE--T
T ss_pred             cceeEEecccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCC--------------CCEEEEEec--C
Confidence            34456788999875 55  45678999999999999999999999888877665              678888887  6


Q ss_pred             eEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeE
Q psy15995        154 FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPIN  233 (683)
Q Consensus       154 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  233 (683)
                      .+|++++.||+|++||+.+++.+  ..+..|...|.+++|+  ++.+++++.++.  +.+|+..+++.+..+.+|...|.
T Consensus       170 ~~l~s~~~dg~i~vwd~~~~~~~--~~~~~h~~~v~~~~~~--~~~l~s~s~dg~--i~~wd~~~~~~~~~~~~~~~~v~  243 (445)
T 2ovr_B          170 NIIISGSTDRTLKVWNAETGECI--HTLYGHTSTVRCMHLH--EKRVVSGSRDAT--LRVWDIETGQCLHVLMGHVAAVR  243 (445)
T ss_dssp             TEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEEE--TTEEEEEETTSE--EEEEESSSCCEEEEEECCSSCEE
T ss_pred             CEEEEEeCCCeEEEEECCcCcEE--EEECCCCCcEEEEEec--CCEEEEEeCCCE--EEEEECCCCcEEEEEcCCcccEE
Confidence            69999999999999999998765  3455778999999995  567888776654  78999999999999999999999


Q ss_pred             EEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC
Q psy15995        234 SCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP  313 (683)
Q Consensus       234 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~  313 (683)
                      ++.|  ++. .+++++.||.|++||.++++....+.+|...|.+++|  +++++++++.||.|++||+++++.+..+.. 
T Consensus       244 ~~~~--~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-  317 (445)
T 2ovr_B          244 CVQY--DGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG-  317 (445)
T ss_dssp             EEEE--CSS-CEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECC-
T ss_pred             EEEE--CCC-EEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcC-
Confidence            9999  455 4999999999999999999999999999999999999  788999999999999999999999988865 


Q ss_pred             ccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCc
Q psy15995        314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPST  393 (683)
Q Consensus       314 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~  393 (683)
                       |...+.++.++  ++++++++.||.|++||+++++.+..+............+.++++++++++.+|.|++||+..+. 
T Consensus       318 -~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~-  393 (445)
T 2ovr_B          318 -HQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE-  393 (445)
T ss_dssp             -CCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCC-
T ss_pred             -CcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCc-
Confidence             88899988875  67999999999999999999998888765433344445555678999999999999999998854 


Q ss_pred             ceeee-----eeccccEEEEEEeCCCCEEEEEeCCCc----EEEEcCCCC
Q psy15995        394 PIRVI-----KGHNKPITALALSPDRGTVFTGSHDGF----ITRWNAKTG  434 (683)
Q Consensus       394 ~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~----i~~w~~~~~  434 (683)
                      .+..+     ..|...|.+++|+|++.++++++.||.    |.+||+...
T Consensus       394 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~  443 (445)
T 2ovr_B          394 FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD  443 (445)
T ss_dssp             EEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred             eeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence            44444     468889999999999999999999998    999998754

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=2.7e-37  Score=309.93  Aligned_cols=324  Identities=20%  Similarity=0.299  Sum_probs=263.8

Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEe
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD  300 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  300 (683)
                      ....+.+|.+.+.. ++.++++ .+++++.||.|++||..+++....+.+|...|.+++|+  ++.+++++.||.|++||
T Consensus       110 ~~~~l~~h~~~v~~-~~~~~g~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd  185 (445)
T 2ovr_B          110 SPKVLKGHDDHVIT-CLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWN  185 (445)
T ss_dssp             CCEEEECSTTSCEE-EEEEETT-EEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEE
T ss_pred             eeEEecccCCCcEE-EEEEcCC-EEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEE
Confidence            45678899887533 2444566 49999999999999999999999999999999999997  56999999999999999


Q ss_pred             CCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecC
Q psy15995        301 GASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS  380 (683)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  380 (683)
                      +.+++.+..+..  |...|.+++|+  ++.+++++.||.|++||+.+++.+..                           
T Consensus       186 ~~~~~~~~~~~~--h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~---------------------------  234 (445)
T 2ovr_B          186 AETGECIHTLYG--HTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHV---------------------------  234 (445)
T ss_dssp             TTTTEEEEEECC--CSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEE---------------------------
T ss_pred             CCcCcEEEEECC--CCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEE---------------------------
Confidence            999999988875  99999999996  56899999999999999998765443                           


Q ss_pred             CcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEE
Q psy15995        381 GFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYT  460 (683)
Q Consensus       381 g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  460 (683)
                                       +.+|...|.++++  +++++++++.||.|++||+.+++..... ..|...+.++.+++..+++
T Consensus       235 -----------------~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~l~~  294 (445)
T 2ovr_B          235 -----------------LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTL-QGHTNRVYSLQFDGIHVVS  294 (445)
T ss_dssp             -----------------EECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEE-CCCSSCEEEEEECSSEEEE
T ss_pred             -----------------EcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEe-cCCCCceEEEEECCCEEEE
Confidence                             3457778888887  6778888888888888888877766655 4677888888888888888


Q ss_pred             EEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeee-cCCCCCcEEEEccCCCEEEEE
Q psy15995        461 CGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSL-PIDYEPSSISLDHEHGLVAVG  539 (683)
Q Consensus       461 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~  539 (683)
                      ++.|+.|++||+.+....                                     ..+ .+...+.++.  +++++++++
T Consensus       295 ~~~d~~i~i~d~~~~~~~-------------------------------------~~~~~~~~~v~~~~--~~~~~l~~~  335 (445)
T 2ovr_B          295 GSLDTSIRVWDVETGNCI-------------------------------------HTLTGHQSLTSGME--LKDNILVSG  335 (445)
T ss_dssp             EETTSCEEEEETTTCCEE-------------------------------------EEECCCCSCEEEEE--EETTEEEEE
T ss_pred             EeCCCeEEEEECCCCCEE-------------------------------------EEEcCCcccEEEEE--EeCCEEEEE
Confidence            888888888888765321                                     111 1222334444  467799999


Q ss_pred             cCCCcEEEEEcCCCccCcceee--cCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccc---eeeecccEEEE
Q psy15995        540 GADSKVHIYELNNKSLSPKAEL--DHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKE---WGFHSAKVNCV  614 (683)
Q Consensus       540 ~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~---~~~h~~~v~~~  614 (683)
                      +.||.|++||+.+++.......  .|...|++++|+  +++|++++.||.|++||+.+++.+....   ...|.+.|.++
T Consensus       336 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~  413 (445)
T 2ovr_B          336 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI  413 (445)
T ss_dssp             ETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEE
T ss_pred             eCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEE
Confidence            9999999999988876544432  378899999995  6899999999999999999998765441   12388899999


Q ss_pred             EecCCCCeEEEeecCCc----EEEEeCCCC
Q psy15995        615 AWSPDSALVASGSLDTT----IIIWSLASP  640 (683)
Q Consensus       615 ~~s~d~~~l~~~~~d~~----v~iw~~~~~  640 (683)
                      +|+|++.+||+|+.||+    |.+||+...
T Consensus       414 ~~s~~~~~la~~~~dg~~~~~l~v~df~~~  443 (445)
T 2ovr_B          414 RASNTKLVCAVGSRNGTEETKLLVLDFDVD  443 (445)
T ss_dssp             EECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred             EecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence            99999999999999998    999999764

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=1.7e-38  Score=312.34  Aligned_cols=305  Identities=13%  Similarity=0.136  Sum_probs=245.8

Q ss_pred             EEEeCCCCcccccccCcccceEEEEECCCC-cEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceee
Q psy15995         68 IIRNIENPAISDIYTEHSCAVNVAKYSPSG-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRN  146 (683)
Q Consensus        68 ~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~-~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  146 (683)
                      .+|+.+..+....+.+|...|++++|+|++ ++||+|+.||.|+|||+.+++....+....            +...|.+
T Consensus        56 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------h~~~v~~  123 (383)
T 3ei3_B           56 FIRSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMG------------PGDAITG  123 (383)
T ss_dssp             HHHHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCS------------TTCBEEE
T ss_pred             ccccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCC------------cCCceeE
Confidence            345556667777889999999999999999 999999999999999999887666554321            1278999


Q ss_pred             eEeec-cceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeee
Q psy15995        147 ILVLS-IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEI  225 (683)
Q Consensus       147 ~~~s~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  225 (683)
                      ++|+| ++.+|++++.|+.|++||+.+...........+...|.+++|+|+++++++++.++.  +.+|+. .++.+..+
T Consensus       124 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--i~i~d~-~~~~~~~~  200 (383)
T 3ei3_B          124 MKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGR--LLLLGL-DGHEIFKE  200 (383)
T ss_dssp             EEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSE--EEEEET-TSCEEEEE
T ss_pred             EEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCC--EEEEEC-CCCEEEEe
Confidence            99999 789999999999999999997543333333445578999999999999999887754  788887 67888899


Q ss_pred             ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC----CceeeeccccccCeEEEEECC-CCCEEEEEcCCCcEEEEe
Q psy15995        226 SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP----FKFKMTKQEHSRFVQAVRYSP-SGSHFASAGFDGKVFLYD  300 (683)
Q Consensus       226 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~  300 (683)
                      .+|...|.+++|+|+++.++++++.|+.|++||+++    ......+ +|...|.+++|+| ++++|++++.|+.|++||
T Consensus       201 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd  279 (383)
T 3ei3_B          201 KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYS  279 (383)
T ss_dssp             ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEE
T ss_pred             ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEE
Confidence            999999999999999985699999999999999887    5555555 6999999999999 999999999999999999


Q ss_pred             CCCCeeEEeccCC-----ccc----------cCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceE
Q psy15995        301 GASADLVSELGNP-----AHK----------GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQV  365 (683)
Q Consensus       301 ~~~~~~~~~~~~~-----~~~----------~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  365 (683)
                      +++++....+...     .|.          ..+..++|+|++++  +++.|+.|++||+.+++.+..+..         
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~---------  348 (383)
T 3ei3_B          280 SYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRD---------  348 (383)
T ss_dssp             TTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECB---------
T ss_pred             CCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecC---------
Confidence            9988765554321     012          34455666666665  667888999999888776544311         


Q ss_pred             EEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCC
Q psy15995        366 SCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       366 ~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~  433 (683)
                                                       ..|...+..++|+|++++|++++ |+.|++||+++
T Consensus       349 ---------------------------------~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          349 ---------------------------------PNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED  382 (383)
T ss_dssp             ---------------------------------TTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred             ---------------------------------CCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence                                             11456778889999999999997 99999999864

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=9.3e-38  Score=307.03  Aligned_cols=303  Identities=18%  Similarity=0.223  Sum_probs=244.1

Q ss_pred             EcCCCCceeeeccccccCeEEEEECCCC-CEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc-CCCEEEEE
Q psy15995        257 FEGPPFKFKMTKQEHSRFVQAVRYSPSG-SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP-DGTQLLTA  334 (683)
Q Consensus       257 w~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~  334 (683)
                      |+....+....+.+|...|.+++|+|++ ++|++++.||.|++||+.+++....+....|...|.+++|+| ++++|+++
T Consensus        58 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~  137 (383)
T 3ei3_B           58 RSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS  137 (383)
T ss_dssp             HHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred             ccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEE
Confidence            4445666777888999999999999999 899999999999999999988887776556999999999999 78999999


Q ss_pred             ECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC
Q psy15995        335 SGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR  414 (683)
Q Consensus       335 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  414 (683)
                      +.|+.|++||++. .....+                                         .....|...|.+++|+|++
T Consensus       138 ~~d~~i~iwd~~~-~~~~~~-----------------------------------------~~~~~~~~~v~~~~~~~~~  175 (383)
T 3ei3_B          138 SIRGATTLRDFSG-SVIQVF-----------------------------------------AKTDSWDYWYCCVDVSVSR  175 (383)
T ss_dssp             ETTTEEEEEETTS-CEEEEE-----------------------------------------ECCCCSSCCEEEEEEETTT
T ss_pred             eCCCEEEEEECCC-CceEEE-----------------------------------------eccCCCCCCeEEEEECCCC
Confidence            9999999999985 322222                                         1123356889999999999


Q ss_pred             CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeec
Q psy15995        415 GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDID  494 (683)
Q Consensus       415 ~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (683)
                      ++|++++.|+.|++||++ ++..... ..                                                   
T Consensus       176 ~~l~~~~~d~~i~i~d~~-~~~~~~~-~~---------------------------------------------------  202 (383)
T 3ei3_B          176 QMLATGDSTGRLLLLGLD-GHEIFKE-KL---------------------------------------------------  202 (383)
T ss_dssp             TEEEEEETTSEEEEEETT-SCEEEEE-EC---------------------------------------------------
T ss_pred             CEEEEECCCCCEEEEECC-CCEEEEe-cc---------------------------------------------------
Confidence            999999999999999984 3322221 11                                                   


Q ss_pred             CCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCC-EEEEEcCCCcEEEEEcCCCccC--cceeecCCcCeeEEE
Q psy15995        495 ENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHG-LVAVGGADSKVHIYELNNKSLS--PKAELDHLGPVTDCS  571 (683)
Q Consensus       495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~~~  571 (683)
                                               +...+.+++++|+++ ++++++.|+.|++||+.+.+..  .....+|...|++++
T Consensus       203 -------------------------h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~  257 (383)
T 3ei3_B          203 -------------------------HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAY  257 (383)
T ss_dssp             -------------------------SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEE
T ss_pred             -------------------------CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEE
Confidence                                     223567889999998 8999999999999999874321  122336899999999


Q ss_pred             ECC-CCCEEEEEeCCCeEEEEECCCCcccccccee-----ee----------cccEEEEEecCCCCeEEEeecCCcEEEE
Q psy15995        572 FSP-SNEYLVASDAHRKVVLYRVPDFELAHNKEWG-----FH----------SAKVNCVAWSPDSALVASGSLDTTIIIW  635 (683)
Q Consensus       572 ~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-----~h----------~~~v~~~~~s~d~~~l~~~~~d~~v~iw  635 (683)
                      |+| ++++|++++.|+.|++||+.+++........     .|          .+.+..++|+||+++  +++.|+.|++|
T Consensus       258 ~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iw  335 (383)
T 3ei3_B          258 FNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIY  335 (383)
T ss_dssp             ECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEE
T ss_pred             EcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEE
Confidence            999 9999999999999999999987765333210     01          245566888888887  88899999999


Q ss_pred             eCCCCceeeEeecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEeecc
Q psy15995        636 SLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~~~  682 (683)
                      |+.+++....+...+|...+..++|+ ++.+|++++ |+.|++|++++
T Consensus       336 d~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          336 DANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED  382 (383)
T ss_dssp             ETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred             ecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence            99999998888766567888888999 778888887 99999999874

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=8.2e-38  Score=331.40  Aligned_cols=294  Identities=22%  Similarity=0.347  Sum_probs=241.3

Q ss_pred             eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC-----ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEE
Q psy15995        223 GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF-----KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVF  297 (683)
Q Consensus       223 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  297 (683)
                      ..+.+|.+.|++++|+|++..+|++|+.|++|++|++...     .....+.+|...|.+++|+|++++|++++.||.|+
T Consensus       376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~  455 (694)
T 3dm0_A          376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR  455 (694)
T ss_dssp             EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence            4578999999999999987657999999999999998753     34567889999999999999999999999999999


Q ss_pred             EEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEE
Q psy15995        298 LYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTV  377 (683)
Q Consensus       298 iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  377 (683)
                      +||+.+++....+..  |...|.+++|+|++++|++++.|+.|++||........ +                       
T Consensus       456 vwd~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~-~-----------------------  509 (694)
T 3dm0_A          456 LWDLAAGVSTRRFVG--HTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYT-I-----------------------  509 (694)
T ss_dssp             EEETTTTEEEEEEEC--CSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE-E-----------------------
T ss_pred             EEECCCCcceeEEeC--CCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCccee-e-----------------------
Confidence            999999999888865  99999999999999999999999999999976432211 1                       


Q ss_pred             ecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC--CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeC
Q psy15995        378 SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR--GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATG  455 (683)
Q Consensus       378 ~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~  455 (683)
                                       .....+|...|.+++|+|++  ..+++++.|+.|++||+.+.+..... .+|           
T Consensus       510 -----------------~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~-~~h-----------  560 (694)
T 3dm0_A          510 -----------------SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTL-AGH-----------  560 (694)
T ss_dssp             -----------------CSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEE-CCC-----------
T ss_pred             -----------------ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEE-cCC-----------
Confidence                             01124588899999999987  58999999999999999876554333 122           


Q ss_pred             CeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCE
Q psy15995        456 ELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGL  535 (683)
Q Consensus       456 ~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  535 (683)
                                                                                       ...+.+++++|++++
T Consensus       561 -----------------------------------------------------------------~~~v~~v~~spdg~~  575 (694)
T 3dm0_A          561 -----------------------------------------------------------------TGYVSTVAVSPDGSL  575 (694)
T ss_dssp             -----------------------------------------------------------------SSCEEEEEECTTSSE
T ss_pred             -----------------------------------------------------------------CCCEEEEEEeCCCCE
Confidence                                                                             234678899999999


Q ss_pred             EEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCcccccccee----------
Q psy15995        536 VAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWG----------  605 (683)
Q Consensus       536 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~----------  605 (683)
                      |++++.||.|++||+.+++....  ..+...|.+++|+|++.+|++++ ++.|++||+.+++.+......          
T Consensus       576 l~sg~~Dg~i~iwd~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  652 (694)
T 3dm0_A          576 CASGGKDGVVLLWDLAEGKKLYS--LEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADN  652 (694)
T ss_dssp             EEEEETTSBCEEEETTTTEEEEC--CBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC--------
T ss_pred             EEEEeCCCeEEEEECCCCceEEE--ecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccc
Confidence            99999999999999998876533  34567899999999999888776 556999999988765432210          


Q ss_pred             -------eecccEEEEEecCCCCeEEEeecCCcEEEEeCCC
Q psy15995        606 -------FHSAKVNCVAWSPDSALVASGSLDTTIIIWSLAS  639 (683)
Q Consensus       606 -------~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~  639 (683)
                             .+...+++++|||||++|++|+.||.|++|++..
T Consensus       653 ~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~  693 (694)
T 3dm0_A          653 SGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR  693 (694)
T ss_dssp             --------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred             cccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence                   0112378999999999999999999999999863

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.5e-40  Score=327.42  Aligned_cols=349  Identities=9%  Similarity=-0.017  Sum_probs=242.0

Q ss_pred             CCCeEEEeeCCCC---------CeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeC
Q psy15995         44 RGQPIVLGGDPKG---------KNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDT  114 (683)
Q Consensus        44 ~~~~~~~~~s~~~---------~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~  114 (683)
                      .+.+.+++|+|++         ++||++.....       .               -..+|+++.+|+++.|++|+|||+
T Consensus       133 ~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~-------~---------------~~~~~~~~~laS~s~D~tI~iWd~  190 (524)
T 2j04_B          133 GGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYM-------D---------------EPLNEHLEMFDKEKHSSCIQIFKM  190 (524)
T ss_dssp             CC--CCCSCEEECCCCSSCSSEEEEEEEEEC----------------------------------------CEEEEEEEE
T ss_pred             CCceeEEEecccCCCCccCcCCeEEEEEEeccc-------C---------------CccchhhhhhccCCCCceEEEEEc
Confidence            4577788999987         78888753210       0               013799999999999999999999


Q ss_pred             CCcccccccccccCCCCcccceeee-eecceeeeEeecc------ceEEEeecCCccEEEEecccccee---------ee
Q psy15995        115 VNKEHILKNEFHPIGGPIKDIGTLL-SLTSIRNILVLSI------GFYIASGDISGKVRIWDTVNKEHI---------LK  178 (683)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~s~~------~~~l~~~~~d~~i~iwd~~~~~~~---------~~  178 (683)
                      .+++......           ..+. +...|..++|+|+      +.+||+++.||+|++||+.+++..         ..
T Consensus       191 ~~~~~~~~~~-----------~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~  259 (524)
T 2j04_B          191 NTSTLHCVKV-----------QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPS  259 (524)
T ss_dssp             ETTTCCEEEE-----------EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCS
T ss_pred             cCCCCCceEE-----------EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCce
Confidence            8765321100           0011 1266899999997      579999999999999999876421         11


Q ss_pred             ccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC-ceeeeecCCcCeEEE--EeecCCCeEEEEeeCCCeEE
Q psy15995        179 NEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT-SVGEISGQSKPINSC--DFKPSRPFRIITGSEDNTIA  255 (683)
Q Consensus       179 ~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~--~~~~~~~~~l~~~~~d~~i~  255 (683)
                      ..+..|...|.+++|+|++ .|++++.++.  +.+|+.+++. +...+.+|...|.++  .|+|+++.+|++++.|++|+
T Consensus       260 ~~l~~h~~~v~sv~~s~~~-~lasgs~Dgt--V~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk  336 (524)
T 2j04_B          260 LTLSLADSLITTFDFLSPT-TVVCGFKNGF--VAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFY  336 (524)
T ss_dssp             EEECCTTTCEEEEEESSSS-EEEEEETTSE--EEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred             EEEEcCCCCEEEEEecCCC-eEEEEeCCCE--EEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence            2455678999999999865 6777776654  7899988764 455689999999999  57887733599999999999


Q ss_pred             EEcCCCCceeeecccccc--CeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEE
Q psy15995        256 VFEGPPFKFKMTKQEHSR--FVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLT  333 (683)
Q Consensus       256 iw~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  333 (683)
                      +||+++++....+.+|..  .|.+++|+|+++.+++++.|++|++||++++.++..+..  |.+.|.+++|+|++++|++
T Consensus       337 lWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g--H~~~V~sva~Sp~g~~l~S  414 (524)
T 2j04_B          337 IFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS--RETTITAIGVSRLHPMVLA  414 (524)
T ss_dssp             EECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE--CSSCEEEEECCSSCCBCEE
T ss_pred             EEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec--CCCceEEEEeCCCCCeEEE
Confidence            999998887777777754  588999999999999999999999999999988777764  9999999999999999999


Q ss_pred             EECCCcEEEEECCCCceeeEEEe----cCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEE
Q psy15995        334 ASGDKTCKLWDIETKSVVSEFIM----GNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALA  409 (683)
Q Consensus       334 ~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~  409 (683)
                      |+.||+|++||+..+ .......    ........+.++++++.+. ..  ....+|+..........+.+|...|.+++
T Consensus       415 gs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~--~~~~~~~~~~~g~~~~~l~gh~~~V~~Va  490 (524)
T 2j04_B          415 GSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-ID--SSYEVYPLTVNDVSKAKIDAHGINITCTK  490 (524)
T ss_dssp             EETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEE-EC--CCCCCCC-------------CCCSCCCEE
T ss_pred             EECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEE-cc--CCceecccccCCcceeeecCCCceEEEEE
Confidence            999999999998754 2221110    0111233556667776442 11  12223333222445667889999999999


Q ss_pred             EeCCCC---EEEEEeCCCcEEEEcCCCC
Q psy15995        410 LSPDRG---TVFTGSHDGFITRWNAKTG  434 (683)
Q Consensus       410 ~~~~~~---~l~~~~~dg~i~~w~~~~~  434 (683)
                      |+|+++   .+++|+.||.|+||++...
T Consensus       491 fsp~~~~~~~lAsg~~~g~vrlw~l~~~  518 (524)
T 2j04_B          491 WNETSAGGKCYAFSNSAGLLTLEYLSLE  518 (524)
T ss_dssp             ECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred             CCCCCCccHHHHhhccCceEEEEEcccc
Confidence            999964   9999999999999998754

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=100.00  E-value=1.4e-36  Score=335.94  Aligned_cols=545  Identities=13%  Similarity=0.073  Sum_probs=372.2

Q ss_pred             ccCCCCCCceeecCCCCCCceeeecccceeecCCCcccCCCeEEEeeCCCCCeEEEecC-------CeEEEEeCCCCccc
Q psy15995          6 LPRTQRGQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNG-------NSVIIRNIENPAIS   78 (683)
Q Consensus         6 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~-------~~i~v~~~~~~~~~   78 (683)
                      ..|+|  +.|+....  +..+++....... ..+ ..+.+.+.+++|||||++||++..       ..|.+||+.+++. 
T Consensus        20 ~~~S~--~~iaf~~~--~~l~~~~~~gg~~-~~l-t~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~-   92 (1045)
T 1k32_A           20 PDIHG--DRIIFVCC--DDLWEHDLKSGST-RKI-VSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI-   92 (1045)
T ss_dssp             EEEET--TEEEEEET--TEEEEEETTTCCE-EEE-ECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE-
T ss_pred             cEEeC--CEEEEEEC--CcEEEEECCCCcE-EEe-eeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCe-
Confidence            34555  45554333  4555554322221 111 124567889999999999998742       3799999998874 


Q ss_pred             ccccCcccce-------EEEEECCCCcEEEEecCC------CCEEEEeCCCcccccccccccCCCCcccceeeeeeccee
Q psy15995         79 DIYTEHSCAV-------NVAKYSPSGFYIASGDIS------GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIR  145 (683)
Q Consensus        79 ~~~~~h~~~v-------~~~~~s~d~~~las~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  145 (683)
                      ..+..|...+       .+++|||||+++++++.+      ..|.+||+.+++... +..                ....
T Consensus        93 ~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~-l~~----------------~~~~  155 (1045)
T 1k32_A           93 KRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVP-LNL----------------GPAT  155 (1045)
T ss_dssp             EECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEE-CCS----------------CSCS
T ss_pred             EEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEE-ecC----------------CCcc
Confidence            5688899988       999999999977887754      347888877664321 111                1223


Q ss_pred             eeEeeccceEEEeecC------------CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEE
Q psy15995        146 NILVLSIGFYIASGDI------------SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHV  213 (683)
Q Consensus       146 ~~~~s~~~~~l~~~~~------------d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~  213 (683)
                      .++|+| | ++++++.            +....+|....+...  ..+..|.+.+.++.|+++ ..+++...+.  ...+
T Consensus       156 ~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~--~~l~~~~~~v~~~~~s~d-~l~~~~~~dg--~~~l  228 (1045)
T 1k32_A          156 HILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAF--KKIVDMSTHVSSPVIVGH-RIYFITDIDG--FGQI  228 (1045)
T ss_dssp             EEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEE--EEEECCSSCCEEEEEETT-EEEEEECTTS--SCEE
T ss_pred             eeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECCCCCe--EECcCCCCcccceEEeCC-EEEEEEeccC--ceEE
Confidence            566999 8 8887642            344667754433222  223678899999999988 3333433332  2467


Q ss_pred             EEccC-CCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc-----------cccCeEEEEEC
Q psy15995        214 FMSET-GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE-----------HSRFVQAVRYS  281 (683)
Q Consensus       214 ~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-----------~~~~v~~~~~~  281 (683)
                      |..+. +.....+..|. .+...+|+|+++. ++.+ .++.|.+|+....+. ..+..           |...+.+++|+
T Consensus       229 ~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~-la~~-~~~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S  304 (1045)
T 1k32_A          229 YSTDLDGKDLRKHTSFT-DYYPRHLNTDGRR-ILFS-KGGSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFS  304 (1045)
T ss_dssp             EEEETTSCSCEECCCCC-SSCEEEEEESSSC-EEEE-ETTEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEE
T ss_pred             EEEeCCCCcceEecCCC-CcceeeEcCCCCE-EEEE-eCCEEEEecCCceEe-eeeccCcccccccccccccccceeeec
Confidence            77654 44555566655 4667799999986 6665 589999999854433 34444           34478999999


Q ss_pred             -CCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCcccc-CeEEEEEccCCCEEEEEECCCcEE-EEECCCCceeeEEEecC
Q psy15995        282 -PSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKG-GVYAVAWKPDGTQLLTASGDKTCK-LWDIETKSVVSEFIMGN  358 (683)
Q Consensus       282 -~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~  358 (683)
                       |+|+.|++++ ++.+.+|+..+++... +.  .+.. .+..++|+ |++.++.++.++.+. +|++..++... +. .+
T Consensus       305 ~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~--~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~-~~  377 (1045)
T 1k32_A          305 PLDGDLIAFVS-RGQAFIQDVSGTYVLK-VP--EPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FE-EN  377 (1045)
T ss_dssp             ECGGGCEEEEE-TTEEEEECTTSSBEEE-CS--CCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CC-CC
T ss_pred             CCCCCEEEEEE-cCEEEEEcCCCCceEE-cc--CCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ec-CC
Confidence             9999998887 7899999998887654 32  2666 89999999 999999999888888 89998776433 22 44


Q ss_pred             cceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCC----------cEEE
Q psy15995        359 QVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDG----------FITR  428 (683)
Q Consensus       359 ~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----------~i~~  428 (683)
                      ......+.++|+++++++++.++.+++||+..+ ........|...+.+++|+|||++|++++.++          .|++
T Consensus       378 ~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg-~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l  456 (1045)
T 1k32_A          378 LGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG-KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHV  456 (1045)
T ss_dssp             CCSEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEE
T ss_pred             ccceeeeEECCCCCEEEEECCCCeEEEEECCCC-ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEE
Confidence            456678889999999999999999999999874 44455567888999999999999999887654          8999


Q ss_pred             EcCCCCCcceeccCCCCcceeEEEEe--CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceE
Q psy15995        429 WNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQI  506 (683)
Q Consensus       429 w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (683)
                      ||+.+++.. .. ..+...+..+.|+  ++.|+..+.++....|+........                           
T Consensus       457 ~d~~~g~~~-~l-~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~---------------------------  507 (1045)
T 1k32_A          457 YDMEGRKIF-AA-TTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSF---------------------------  507 (1045)
T ss_dssp             EETTTTEEE-EC-SCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEEC---------------------------
T ss_pred             EECCCCcEE-Ee-eCCCcccCCceEcCCCCEEEEEecccCCcCcchhcccccc---------------------------
Confidence            999987632 22 4466677777777  8889999988888888865321100                           


Q ss_pred             EEEeCCceeeeecCCCCCcEEEEccCCCEE--EEEc-CCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEE--
Q psy15995        507 SIVENGAKVSSLPIDYEPSSISLDHEHGLV--AVGG-ADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVA--  581 (683)
Q Consensus       507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--  581 (683)
                                  +....+..+.++++....  +... .+-....|++.+..........+.+.+..++++||++++++  
T Consensus       508 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~  575 (1045)
T 1k32_A          508 ------------EVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVP  575 (1045)
T ss_dssp             ------------CSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECC
T ss_pred             ------------ccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEec
Confidence                        000111222222222211  1111 11111235554322111122236678999999999988885  


Q ss_pred             -----------EeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCc
Q psy15995        582 -----------SDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPA  641 (683)
Q Consensus       582 -----------~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~  641 (683)
                                 ......+.+||+.+++....      ...+.+++|||||+.|++++.| .|++||+.+++
T Consensus       576 ~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l------~~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~  639 (1045)
T 1k32_A          576 VHGEFAAYYQGAPEKGVLLKYDVKTRKVTEV------KNNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP  639 (1045)
T ss_dssp             CCCSHHHHHHCCCCCEEEEEEETTTCCEEEE------EEEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred             ccCcccccccccCCCceEEEEECCCCcEEEe------ecCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence                       12356788999988875321      1568899999999999999877 79999998876

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=3e-38  Score=309.95  Aligned_cols=322  Identities=14%  Similarity=0.158  Sum_probs=257.4

Q ss_pred             ccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc--cccccccccCCCCcccceeeeeecceeeeEeeccceEEEe
Q psy15995         81 YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE--HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIAS  158 (683)
Q Consensus        81 ~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  158 (683)
                      +..|.++|++++|+|++++||+++.|+.|++||+.+++  .+..+..|.              ..|.+++|+|++++|++
T Consensus         4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~~~~~l~~   69 (372)
T 1k8k_C            4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHN--------------GQVTGVDWAPDSNRIVT   69 (372)
T ss_dssp             EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCS--------------SCEEEEEEETTTTEEEE
T ss_pred             ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCC--------------CcccEEEEeCCCCEEEE
Confidence            45699999999999999999999999999999999886  666665554              78999999999999999


Q ss_pred             ecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCc----eeeeecCCcCeEE
Q psy15995        159 GDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTS----VGEISGQSKPINS  234 (683)
Q Consensus       159 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~  234 (683)
                      ++.||.|++||+.+++.........+...|.+++|+|+++++++++.++.  +.+|+++.+..    ......|...|.+
T Consensus        70 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--v~i~d~~~~~~~~~~~~~~~~~~~~i~~  147 (372)
T 1k8k_C           70 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV--ISICYFEQENDWWVCKHIKKPIRSTVLS  147 (372)
T ss_dssp             EETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSS--EEEEEEETTTTEEEEEEECTTCCSCEEE
T ss_pred             EcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCE--EEEEEecCCCcceeeeeeecccCCCeeE
Confidence            99999999999998876666666778899999999999999999987654  78888888763    2333678999999


Q ss_pred             EEeecCCCeEEEEeeCCCeEEEEcC------------------CCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcE
Q psy15995        235 CDFKPSRPFRIITGSEDNTIAVFEG------------------PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKV  296 (683)
Q Consensus       235 ~~~~~~~~~~l~~~~~d~~i~iw~~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  296 (683)
                      ++|+|+++. +++++.|+.|++||+                  ..++....+..|...|.+++|+|++++|++++.||.|
T Consensus       148 ~~~~~~~~~-l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  226 (372)
T 1k8k_C          148 LDWHPNSVL-LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTV  226 (372)
T ss_dssp             EEECTTSSE-EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEE
T ss_pred             EEEcCCCCE-EEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEE
Confidence            999999985 999999999999994                  4678888888999999999999999999999999999


Q ss_pred             EEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCC--CceeeEEEecCcceeceEEEEecCCEE
Q psy15995        297 FLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIET--KSVVSEFIMGNQVEDQQVSCLWQGDYL  374 (683)
Q Consensus       297 ~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l  374 (683)
                      ++||+++++.+..+..  |...|.+++|+|++++++++ .|+.+++|++..  ++..........             .-
T Consensus       227 ~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~-------------~~  290 (372)
T 1k8k_C          227 CLADADKKMAVATLAS--ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVP-------------KQ  290 (372)
T ss_dssp             EEEEGGGTTEEEEEEC--SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC---------------
T ss_pred             EEEECCCCceeEEEcc--CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCcc-------------cc
Confidence            9999999999988875  88899999999999888777 899999999987  431110000000             00


Q ss_pred             EEEecCCcEEEE---ecCCCCcc------eeeeeeccccEEEEEEe-CCC---CEEEEEeCCCcEEEEcCCCCCc
Q psy15995        375 LTVSLSGFISYL---DVNNPSTP------IRVIKGHNKPITALALS-PDR---GTVFTGSHDGFITRWNAKTGEN  436 (683)
Q Consensus       375 ~~~~~~g~i~~~---~~~~~~~~------~~~~~~~~~~v~~~~~~-~~~---~~l~~~~~dg~i~~w~~~~~~~  436 (683)
                      ........+.+|   +... ...      .....+|...|++++|. +++   ++|++++.||.|++|++.+++.
T Consensus       291 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~  364 (372)
T 1k8k_C          291 SSQRGLTARERFQNLDKKA-SSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES  364 (372)
T ss_dssp             ------CHHHHHHHCCCCC----------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred             chhhhcchhhhhhhccccc-ccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence            011112223333   2111 111      22234899999999966 666   9999999999999999876543

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1.7e-37  Score=307.33  Aligned_cols=315  Identities=16%  Similarity=0.235  Sum_probs=254.2

Q ss_pred             ccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc------cccccccccCCCCcccceeeeeecceeeeEee
Q psy15995         77 ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE------HILKNEFHPIGGPIKDIGTLLSLTSIRNILVL  150 (683)
Q Consensus        77 ~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  150 (683)
                      ....+.+|.+.|++++|+|  ++|++++.||.|++||+.+++      .+..+..|.              ..|.+++|+
T Consensus         8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~--------------~~v~~~~~~   71 (397)
T 1sq9_A            8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK--------------SGLHHVDVL   71 (397)
T ss_dssp             EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCT--------------TCEEEEEEE
T ss_pred             hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCC--------------CcEEEEEEe
Confidence            3456889999999999999  799999999999999999887      444444443              779999999


Q ss_pred             cc----c---eEEEeecCCccEEEEecccccee---eecccccc-----CCCeeEEEEc----CCCCe-EEEEecCCceE
Q psy15995        151 SI----G---FYIASGDISGKVRIWDTVNKEHI---LKNEFHPI-----GGPIKDIAWS----PDNQR-MVVVGEGRERF  210 (683)
Q Consensus       151 ~~----~---~~l~~~~~d~~i~iwd~~~~~~~---~~~~~~~~-----~~~i~~~~~s----~~~~~-l~~~~~~~~~~  210 (683)
                      |+    +   ++|++++.||.|++||+.+++..   ....+..+     ...|.+++|+    |++++ +++++.++.  
T Consensus        72 ~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~--  149 (397)
T 1sq9_A           72 QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGT--  149 (397)
T ss_dssp             EEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSC--
T ss_pred             cccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCc--
Confidence            99    9   99999999999999999987740   02333444     4899999999    99999 888877654  


Q ss_pred             EEEEEccC------CCcee-----ee-------ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc--
Q psy15995        211 GHVFMSET------GTSVG-----EI-------SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE--  270 (683)
Q Consensus       211 ~~~~~~~~------~~~~~-----~~-------~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~--  270 (683)
                      +.+|+...      ++.+.     .+       ..|...|.+++|+|++  .+++++.|+.|++||+++++.+..+..  
T Consensus       150 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  227 (397)
T 1sq9_A          150 TYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQH  227 (397)
T ss_dssp             EEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC
T ss_pred             EEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccc
Confidence            78899888      77766     77       4489999999999999  499999999999999999999999988  


Q ss_pred             -c---ccCeEEEEECCCCCEEEEEcCC---CcEEEEeCCCCeeEEeccCCc-----------cccCeEEEEEccCCCEEE
Q psy15995        271 -H---SRFVQAVRYSPSGSHFASAGFD---GKVFLYDGASADLVSELGNPA-----------HKGGVYAVAWKPDGTQLL  332 (683)
Q Consensus       271 -~---~~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~  332 (683)
                       |   ...|.+++|+|++++|++++.|   |.|++||+.+++.+..+..+.           |...|.+++|+|++++|+
T Consensus       228 ~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  307 (397)
T 1sq9_A          228 SMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC  307 (397)
T ss_dssp             ---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEE
T ss_pred             cccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEE
Confidence             8   9999999999999999999999   999999999999888875321           788999999999999999


Q ss_pred             EEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeC
Q psy15995        333 TASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSP  412 (683)
Q Consensus       333 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  412 (683)
                      +++.||.|++||+.+++.+..+.........      .        .       |..  .........|...|.+++|+|
T Consensus       308 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~------~--------~-------~~~--~g~~~~~~~~~~~v~~~~~~~  364 (397)
T 1sq9_A          308 SAGWDGKLRFWDVKTKERITTLNMHCDDIEI------E--------E-------DIL--AVDEHGDSLAEPGVFDVKFLK  364 (397)
T ss_dssp             EEETTSEEEEEETTTTEEEEEEECCGGGCSS------G--------G-------GCC--CBCTTSCBCSSCCEEEEEEEC
T ss_pred             EEeCCCeEEEEEcCCCceeEEEecccCcccc------h--------h-------hhh--ccccccccccCCceeEEEecc
Confidence            9999999999999998877766421000000      0        0       000  000112244689999999999


Q ss_pred             CC----------CEEEEEeCCCcEEEEcCCCC
Q psy15995        413 DR----------GTVFTGSHDGFITRWNAKTG  434 (683)
Q Consensus       413 ~~----------~~l~~~~~dg~i~~w~~~~~  434 (683)
                      ++          ++|++++.||.|++|++.++
T Consensus       365 ~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g  396 (397)
T 1sq9_A          365 KGWRSGMGADLNESLCCVCLDRSIRWFREAGG  396 (397)
T ss_dssp             TTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred             ccccccccccccceEEEecCCCcEEEEEcCCC
Confidence            98          79999999999999998775

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=1.5e-37  Score=309.34  Aligned_cols=358  Identities=16%  Similarity=0.207  Sum_probs=249.1

Q ss_pred             EEEEccCCCceeeeecCCcCeEEEEeec-CCCeEEEEeeCCCeEEEEcCCCCceeeecc-------------ccccCeEE
Q psy15995        212 HVFMSETGTSVGEISGQSKPINSCDFKP-SRPFRIITGSEDNTIAVFEGPPFKFKMTKQ-------------EHSRFVQA  277 (683)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-------------~~~~~v~~  277 (683)
                      .+|+++.++....+.+|.+.|++++|+| ++++ |++++.||.|++||+.+++....+.             +|...|.+
T Consensus        26 ~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  104 (408)
T 4a11_B           26 RVLGLELNKDRDVERIHGGGINTLDIEPVEGRY-MLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVET  104 (408)
T ss_dssp             HHHTEEECTTEEECCCCSSCEEEEEECTTTCCE-EEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEE
T ss_pred             eeeccccCcceeeeeccCCcEEEEEEecCCCCE-EEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEE
Confidence            4555666777788889999999999999 8885 9999999999999998876655443             59999999


Q ss_pred             EEECC-CCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccC---CCEEEEEECCCcEEEEECCCCceeeE
Q psy15995        278 VRYSP-SGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPD---GTQLLTASGDKTCKLWDIETKSVVSE  353 (683)
Q Consensus       278 ~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~  353 (683)
                      ++|+| ++++|++++.||.|++||+.+++....+.   +...+.++.+.|.   +.++++++.++.|++||+++++.+. 
T Consensus       105 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~-  180 (408)
T 4a11_B          105 VQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN---FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSH-  180 (408)
T ss_dssp             EEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE---CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCE-
T ss_pred             EEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc---CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceee-
Confidence            99999 77799999999999999999999888876   6778999999984   4599999999999999998765433 


Q ss_pred             EEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCC-EEEEEeCCCcEEEEcCC
Q psy15995        354 FIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRG-TVFTGSHDGFITRWNAK  432 (683)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~w~~~  432 (683)
                                                                 .+..|...|.+++|+|+++ .+++++.||.|++||++
T Consensus       181 -------------------------------------------~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~  217 (408)
T 4a11_B          181 -------------------------------------------ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVR  217 (408)
T ss_dssp             -------------------------------------------EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred             -------------------------------------------eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECC
Confidence                                                       3456889999999999998 58899999999999998


Q ss_pred             CCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCC
Q psy15995        433 TGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENG  512 (683)
Q Consensus       433 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (683)
                      +..........+.....                             .                                .
T Consensus       218 ~~~~~~~~~~~~~~~~~-----------------------------~--------------------------------~  236 (408)
T 4a11_B          218 RASGCLITLDQHNGKKS-----------------------------Q--------------------------------A  236 (408)
T ss_dssp             CSSCCSEECCTTTTCSC-----------------------------C--------------------------------C
T ss_pred             CCCcccccccccccccc-----------------------------e--------------------------------e
Confidence            76532222111110000                             0                                0


Q ss_pred             ceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeec----CCcCeeEEEECCCCCEEEEEeCCCeE
Q psy15995        513 AKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELD----HLGPVTDCSFSPSNEYLVASDAHRKV  588 (683)
Q Consensus       513 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~d~~i  588 (683)
                      .......+...+.+++++|++++|++++.||.|++||+.+++........    ....+........+..+++++.++.|
T Consensus       237 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  316 (408)
T 4a11_B          237 VESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTI  316 (408)
T ss_dssp             TTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEE
T ss_pred             eccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEE
Confidence            00001124457899999999999999999999999999987765332211    11222223333455667777889999


Q ss_pred             EEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEccCCeEEE
Q psy15995        589 VLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVS  668 (683)
Q Consensus       589 ~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s  668 (683)
                      ++||+.+++.+...  .+|...|++++|+|++++|++++.||.|++|++.+++.......   ......+.......+.+
T Consensus       317 ~v~d~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  391 (408)
T 4a11_B          317 AVYTVYSGEQITML--KGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDE---TTTKSQLNPAFEDAWSS  391 (408)
T ss_dssp             EEEETTTCCEEEEE--CCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----------------------------
T ss_pred             EEEECcCCcceeee--ccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCc---eEeccccccccceeecc
Confidence            99999999887544  34999999999999999999999999999999999887655433   11222333335556778


Q ss_pred             eeCCCcEEEEeeccC
Q psy15995        669 VGQDCNTKIWEIAPF  683 (683)
Q Consensus       669 ~~~d~~v~vw~~~~~  683 (683)
                      .+.|+.+++|+.+.|
T Consensus       392 ~~~~~~~~~W~~~~~  406 (408)
T 4a11_B          392 SDEEGGTSAWSHPQF  406 (408)
T ss_dssp             ---------------
T ss_pred             cCccCceeecCCccc
Confidence            889999999998765

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=2.7e-38  Score=315.34  Aligned_cols=302  Identities=15%  Similarity=0.177  Sum_probs=231.1

Q ss_pred             ccccccCcccceEEEEECC-CCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeec-cce
Q psy15995         77 ISDIYTEHSCAVNVAKYSP-SGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS-IGF  154 (683)
Q Consensus        77 ~~~~~~~h~~~v~~~~~s~-d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~  154 (683)
                      ......+|...|+||+|+| ++++||+|+.||.|+|||+.+++....+....            +...|.+++|+| ++.
T Consensus       111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~g------------H~~~V~~l~f~p~~~~  178 (435)
T 4e54_B          111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIG------------AGGSITGLKFNPLNTN  178 (435)
T ss_dssp             SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCS------------SSCCCCEEEECSSCTT
T ss_pred             ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccC------------CCCCEEEEEEeCCCCC
Confidence            3444567899999999999 67899999999999999998776544333222            127799999998 689


Q ss_pred             EEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEE
Q psy15995        155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINS  234 (683)
Q Consensus       155 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  234 (683)
                      +|++++.||+|++||++++..........+...+.+++|+|+++++++++.++.  +.+|+.+ ++.+..+.+|...|.+
T Consensus       179 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~--i~~wd~~-~~~~~~~~~h~~~v~~  255 (435)
T 4e54_B          179 QFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGN--VILLNMD-GKELWNLRMHKKKVTH  255 (435)
T ss_dssp             EEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSB--EEEEESS-SCBCCCSBCCSSCEEE
T ss_pred             EEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCc--EeeeccC-cceeEEEecccceEEe
Confidence            999999999999999987654433334444567889999999999999887654  6788875 5677889999999999


Q ss_pred             EEeecCCCeEEEEeeCCCeEEEEcCCCCceeee---ccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEecc
Q psy15995        235 CDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT---KQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG  311 (683)
Q Consensus       235 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  311 (683)
                      ++|+|+++.++++++.|+.|++||+++.+....   ..+|...|.+++|+|++++|++++.||.|++||+.+++....+.
T Consensus       256 v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~  335 (435)
T 4e54_B          256 VALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLI  335 (435)
T ss_dssp             EEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEEC
T ss_pred             eeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEe
Confidence            999999987799999999999999887665443   35799999999999999999999999999999999988776654


Q ss_pred             CCcc----ccCeEEEEEccCCCEEEEEEC-C-----------CcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEE
Q psy15995        312 NPAH----KGGVYAVAWKPDGTQLLTASG-D-----------KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLL  375 (683)
Q Consensus       312 ~~~~----~~~i~~~~~~~~~~~l~~~~~-d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  375 (683)
                      ...+    ...+....|+|++..++++.. +           +.|++||..+++.+.                       
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~-----------------------  392 (435)
T 4e54_B          336 PHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMC-----------------------  392 (435)
T ss_dssp             CCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEE-----------------------
T ss_pred             cccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEE-----------------------
Confidence            3111    112345677887777776643 2           345555555444332                       


Q ss_pred             EEecCCcEEEEecCCCCcceeeeeeccccEEEE-EEeCCCCEEEEEeCCCcEEEEcCCCCCcc
Q psy15995        376 TVSLSGFISYLDVNNPSTPIRVIKGHNKPITAL-ALSPDRGTVFTGSHDGFITRWNAKTGEND  437 (683)
Q Consensus       376 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~dg~i~~w~~~~~~~~  437 (683)
                                          ....+|...|.++ +|+|+|++|++|+ |+.|++|++++++..
T Consensus       393 --------------------~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r  434 (435)
T 4e54_B          393 --------------------QLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR  434 (435)
T ss_dssp             --------------------EECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred             --------------------EEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence                                2234577788887 6999999999876 789999999987653

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=1e-37  Score=304.28  Aligned_cols=299  Identities=16%  Similarity=0.253  Sum_probs=239.8

Q ss_pred             eeecCCcCeEEEEeecCCCeEEEEeeC---CCeEEEEcCCCCceeeec-cccccCeEEEEECCC---CCEEEEEcCCCcE
Q psy15995        224 EISGQSKPINSCDFKPSRPFRIITGSE---DNTIAVFEGPPFKFKMTK-QEHSRFVQAVRYSPS---GSHFASAGFDGKV  296 (683)
Q Consensus       224 ~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~~~~dg~i  296 (683)
                      .+.+|...|.+++|+|+++.++++++.   |+.|++||+.+++..... .+|...|.+++|+|+   +++|++++.||.|
T Consensus        13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i   92 (357)
T 3i2n_A           13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL   92 (357)
T ss_dssp             EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred             hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence            457799999999999999876777776   999999999988765443 378999999999999   6999999999999


Q ss_pred             EEEeCCCCe-eEEeccCCccccCeEEEEE------ccCCCEEEEEECCCcEEEEECCCCc-eeeEEEecCcceeceEEEE
Q psy15995        297 FLYDGASAD-LVSELGNPAHKGGVYAVAW------KPDGTQLLTASGDKTCKLWDIETKS-VVSEFIMGNQVEDQQVSCL  368 (683)
Q Consensus       297 ~iw~~~~~~-~~~~~~~~~~~~~i~~~~~------~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~  368 (683)
                      ++||+.+++ .+..+..  |...|.++.|      +|++++|++++.||.|++||+++++ .+..+....          
T Consensus        93 ~iwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~----------  160 (357)
T 3i2n_A           93 HIWNLEAPEMPVYSVKG--HKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ----------  160 (357)
T ss_dssp             EEECTTSCSSCSEEECC--CSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT----------
T ss_pred             EEEeCCCCCccEEEEEe--cccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC----------
Confidence            999999887 7777765  9999999955      6789999999999999999998875 333221100          


Q ss_pred             ecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEE----EeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCC
Q psy15995        369 WQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALA----LSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGH  444 (683)
Q Consensus       369 ~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~  444 (683)
                                                    ..+...+.+++    |+|+++++++++.||.|++||+++++.....    
T Consensus       161 ------------------------------~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----  206 (357)
T 3i2n_A          161 ------------------------------GENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET----  206 (357)
T ss_dssp             ------------------------------TSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE----
T ss_pred             ------------------------------CCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec----
Confidence                                          01133678887    7889999999999999999999876542211    


Q ss_pred             CcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCC
Q psy15995        445 GNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEP  524 (683)
Q Consensus       445 ~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  524 (683)
                                                                                                .+...+
T Consensus       207 --------------------------------------------------------------------------~~~~~v  212 (357)
T 3i2n_A          207 --------------------------------------------------------------------------NIKNGV  212 (357)
T ss_dssp             --------------------------------------------------------------------------ECSSCE
T ss_pred             --------------------------------------------------------------------------CCCCce
Confidence                                                                                      122356


Q ss_pred             cEEEEcc---CCCEEEEEcCCCcEEEEEcCCCccCccee----ecCCcCeeEEEECCCCC-EEEEEeCCCeEEEEECCCC
Q psy15995        525 SSISLDH---EHGLVAVGGADSKVHIYELNNKSLSPKAE----LDHLGPVTDCSFSPSNE-YLVASDAHRKVVLYRVPDF  596 (683)
Q Consensus       525 ~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~  596 (683)
                      .+++++|   +++++++++.||.|++||+.+++......    ..|...|++++|+|+++ +|++++.||.|++||+.++
T Consensus       213 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  292 (357)
T 3i2n_A          213 CSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP  292 (357)
T ss_dssp             EEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred             EEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence            7889999   89999999999999999998877654433    26899999999999998 8999999999999999864


Q ss_pred             ccc-----------------cccceeeecccEEEEEecCCCCeEE-EeecCCcEEEEeCCCCce
Q psy15995        597 ELA-----------------HNKEWGFHSAKVNCVAWSPDSALVA-SGSLDTTIIIWSLASPAK  642 (683)
Q Consensus       597 ~~~-----------------~~~~~~~h~~~v~~~~~s~d~~~l~-~~~~d~~v~iw~~~~~~~  642 (683)
                      ...                 ....+.+|...|++++|+|++++|+ +++.|+.|++||+.+.+.
T Consensus       293 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~  356 (357)
T 3i2n_A          293 IQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK  356 (357)
T ss_dssp             SCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred             cccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence            322                 2234455899999999999999998 899999999999987653

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=1.8e-37  Score=328.86  Aligned_cols=307  Identities=23%  Similarity=0.353  Sum_probs=245.1

Q ss_pred             ccccCcccceEEEEECCCC-cEEEEecCCCCEEEEeCCCcccc-----cccccccCCCCcccceeeeeecceeeeEeecc
Q psy15995         79 DIYTEHSCAVNVAKYSPSG-FYIASGDISGKVRIWDTVNKEHI-----LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI  152 (683)
Q Consensus        79 ~~~~~h~~~v~~~~~s~d~-~~las~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  152 (683)
                      ..+++|.+.|++++|+|++ ++|+||+.|++|++||+.+....     ..+..|.              ..|.+++|+|+
T Consensus       376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~--------------~~v~~v~~s~~  441 (694)
T 3dm0_A          376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHS--------------HFVEDVVLSSD  441 (694)
T ss_dssp             EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCS--------------SCEEEEEECTT
T ss_pred             hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCC--------------CcEEEEEECCC
Confidence            4578999999999999865 79999999999999999865322     2233332              77999999999


Q ss_pred             ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceee---eecCC
Q psy15995        153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGE---ISGQS  229 (683)
Q Consensus       153 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  229 (683)
                      +++|++|+.|++|++||+.+++..  ..+..|...|.+++|+|+++++++++.++.  +++|+.........   ..+|.
T Consensus       442 g~~l~sgs~Dg~v~vwd~~~~~~~--~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~--i~iwd~~~~~~~~~~~~~~~h~  517 (694)
T 3dm0_A          442 GQFALSGSWDGELRLWDLAAGVST--RRFVGHTKDVLSVAFSLDNRQIVSASRDRT--IKLWNTLGECKYTISEGGEGHR  517 (694)
T ss_dssp             SSEEEEEETTSEEEEEETTTTEEE--EEEECCSSCEEEEEECTTSSCEEEEETTSC--EEEECTTSCEEEEECSSTTSCS
T ss_pred             CCEEEEEeCCCcEEEEECCCCcce--eEEeCCCCCEEEEEEeCCCCEEEEEeCCCE--EEEEECCCCcceeeccCCCCCC
Confidence            999999999999999999988754  445678899999999999999999988754  67777654332222   24789


Q ss_pred             cCeEEEEeecCCC-eEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy15995        230 KPINSCDFKPSRP-FRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVS  308 (683)
Q Consensus       230 ~~v~~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~  308 (683)
                      ..|.+++|+|++. ..+++++.|++|++||+++.+....+.+|...|.+++|+|++++|++++.||.|++||+.+++.+.
T Consensus       518 ~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~  597 (694)
T 3dm0_A          518 DWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLY  597 (694)
T ss_dssp             SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEE
T ss_pred             CcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence            9999999999872 359999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             eccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEec
Q psy15995        309 ELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDV  388 (683)
Q Consensus       309 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~  388 (683)
                      .+.   +...|.+++|+|++.++++++ ++.|++||+++++.+..+............                      
T Consensus       598 ~~~---~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----------------------  651 (694)
T 3dm0_A          598 SLE---ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKAD----------------------  651 (694)
T ss_dssp             CCB---CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC-----------------------------
T ss_pred             Eec---CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhcccccccccccc----------------------
Confidence            775   556899999999998777765 566999999998887665332211000000                      


Q ss_pred             CCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        389 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       389 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                         .........+...+++++|+|++++|++|+.||.|++|++.
T Consensus       652 ---~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~  692 (694)
T 3dm0_A          652 ---NSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG  692 (694)
T ss_dssp             ------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             ---ccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence               00000112233457899999999999999999999999985

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=8.8e-38  Score=310.96  Aligned_cols=360  Identities=14%  Similarity=0.187  Sum_probs=254.5

Q ss_pred             cCCeEEEEeCCCCcccccccCcccceEEEEECC-CCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeee
Q psy15995         63 NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSP-SGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSL  141 (683)
Q Consensus        63 ~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~-d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (683)
                      .+..+++|+++.++....+.+|.+.|++++|+| ++++||+++.||.|++||+.+++....+....... ........+.
T Consensus        21 ~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   99 (408)
T 4a11_B           21 AESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCS-IGRDHPDVHR   99 (408)
T ss_dssp             HHHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEE-ECTTCTTCCS
T ss_pred             ccCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccccc-ccccccccCC
Confidence            345678899988888889999999999999999 99999999999999999999887665543211000 0000000133


Q ss_pred             cceeeeEeec-cceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCC---CeEEEEecCCceEEEEEEcc
Q psy15995        142 TSIRNILVLS-IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDN---QRMVVVGEGRERFGHVFMSE  217 (683)
Q Consensus       142 ~~i~~~~~s~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~~~~~~~~~~~~~  217 (683)
                      ..|.+++|+| ++.+|++++.||.|++||+.+++......   +...+.++.|+|.+   .++++++.++.  +.+|+.+
T Consensus       100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~d~~  174 (408)
T 4a11_B          100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN---FEETVYSHHMSPVSTKHCLVAVGTRGPK--VQLCDLK  174 (408)
T ss_dssp             SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE---CSSCEEEEEECSSCSSCCEEEEEESSSS--EEEEESS
T ss_pred             CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc---CCCceeeeEeecCCCCCcEEEEEcCCCe--EEEEeCC
Confidence            7899999999 78899999999999999999987665544   45789999999854   47888776654  7899999


Q ss_pred             CCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc-eeeec---------------cccccCeEEEEEC
Q psy15995        218 TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK-FKMTK---------------QEHSRFVQAVRYS  281 (683)
Q Consensus       218 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~---------------~~~~~~v~~~~~~  281 (683)
                      +++.+..+.+|...|.+++|+|++++++++++.||.|++||++... ....+               ..|...|.+++|+
T Consensus       175 ~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  254 (408)
T 4a11_B          175 SGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT  254 (408)
T ss_dssp             SSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC
T ss_pred             CcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc
Confidence            9999999999999999999999999769999999999999987665 22222               5788999999999


Q ss_pred             CCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCc---cccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecC
Q psy15995        282 PSGSHFASAGFDGKVFLYDGASADLVSELGNPA---HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGN  358 (683)
Q Consensus       282 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  358 (683)
                      |++++|++++.||.|++||+.+++.........   ....+........+..+++++.++.|++||+.+++.+.      
T Consensus       255 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~------  328 (408)
T 4a11_B          255 SDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQIT------  328 (408)
T ss_dssp             TTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEE------
T ss_pred             CCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCccee------
Confidence            999999999999999999999887655443211   11122222223345566777778899999988776543      


Q ss_pred             cceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcce
Q psy15995        359 QVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDR  438 (683)
Q Consensus       359 ~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~  438 (683)
                                                            .+.+|...|++++|+|++++|++++.||.|++||+.+.+...
T Consensus       329 --------------------------------------~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~  370 (408)
T 4a11_B          329 --------------------------------------MLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVP  370 (408)
T ss_dssp             --------------------------------------EECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----
T ss_pred             --------------------------------------eeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccC
Confidence                                                  346788999999999999999999999999999999987765


Q ss_pred             eccCCCCcceeEEEEe-CCeEEEEEcCCeEEEEeCCC
Q psy15995        439 VQGAGHGNQINGMKAT-GELLYTCGIDDTIKQVDLSS  474 (683)
Q Consensus       439 ~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~~~~~~  474 (683)
                      ......  ....+... .....+.+.++.+++|+...
T Consensus       371 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~W~~~~  405 (408)
T 4a11_B          371 DDDETT--TKSQLNPAFEDAWSSSDEEGGTSAWSHPQ  405 (408)
T ss_dssp             -------------------------------------
T ss_pred             CCCceE--eccccccccceeecccCccCceeecCCcc
Confidence            442211  11222222 45566777899999998653

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1.1e-38  Score=312.38  Aligned_cols=320  Identities=13%  Similarity=0.219  Sum_probs=242.2

Q ss_pred             eecCCcCeEEEEeecC---CCeEEEEeeCCCeEEEEcCCCCceeeeccc-----cccCeEEEEECCC----CCEEEEEcC
Q psy15995        225 ISGQSKPINSCDFKPS---RPFRIITGSEDNTIAVFEGPPFKFKMTKQE-----HSRFVQAVRYSPS----GSHFASAGF  292 (683)
Q Consensus       225 ~~~~~~~v~~~~~~~~---~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~~~~  292 (683)
                      ..+|..+|.+++|+|+   +...+++++.++.|++||..+++.+..+..     |...|.+++|+|+    +++|++++.
T Consensus        14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~   93 (366)
T 3k26_A           14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS   93 (366)
T ss_dssp             ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred             ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence            4589999999999984   444577777788999999998877766654     5577999999999    679999999


Q ss_pred             CCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc-CCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecC
Q psy15995        293 DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP-DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQG  371 (683)
Q Consensus       293 dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (683)
                      ||.|++||+.+++.+..+..  |...|.+++|+| ++++|++++.||.|++||+++++.+..+                 
T Consensus        94 dg~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----------------  154 (366)
T 3k26_A           94 RGIIRIINPITMQCIKHYVG--HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF-----------------  154 (366)
T ss_dssp             TCEEEEECTTTCCEEEEEES--CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE-----------------
T ss_pred             CCEEEEEEchhceEeeeecC--CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe-----------------
Confidence            99999999999999888875  999999999999 9999999999999999999987655433                 


Q ss_pred             CEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEE
Q psy15995        372 DYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGM  451 (683)
Q Consensus       372 ~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~  451 (683)
                                              ..+..|...|.+++|+|++++|++++.||.|++||+++++........        
T Consensus       155 ------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--------  202 (366)
T 3k26_A          155 ------------------------GGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKES--------  202 (366)
T ss_dssp             ------------------------CSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHH--------
T ss_pred             ------------------------cccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCcccccccee--------
Confidence                                    112468899999999999999999999999999999887654433210        


Q ss_pred             EEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEcc
Q psy15995        452 KATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDH  531 (683)
Q Consensus       452 ~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  531 (683)
                                                                                                 +.++|
T Consensus       203 ---------------------------------------------------------------------------~~~~~  207 (366)
T 3k26_A          203 ---------------------------------------------------------------------------YDYNP  207 (366)
T ss_dssp             ---------------------------------------------------------------------------HTCCG
T ss_pred             ---------------------------------------------------------------------------EEecC
Confidence                                                                                       00111


Q ss_pred             CCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCcc------------c
Q psy15995        532 EHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFEL------------A  599 (683)
Q Consensus       532 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~------------~  599 (683)
                      ++..++........         ........|...|.+++|+  +++|++++.|+.|++||+.+++.            .
T Consensus       208 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~  276 (366)
T 3k26_A          208 NKTNRPFISQKIHF---------PDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVT  276 (366)
T ss_dssp             GGCSSCCCCEEECC---------CSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEE
T ss_pred             CCCcccccceeecc---------CccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchh
Confidence            11111100000000         0001112266677777776  56777777777777777765543            1


Q ss_pred             cccceeeecccEEEEEecCC--CCeEEEeecCCcEEEEeCCCCceee----EeecCCCCCCeeEEEEc-cCCeEEEeeCC
Q psy15995        600 HNKEWGFHSAKVNCVAWSPD--SALVASGSLDTTIIIWSLASPAKHI----IIKNAHPQSQITRLQWL-DNDLLVSVGQD  672 (683)
Q Consensus       600 ~~~~~~~h~~~v~~~~~s~d--~~~l~~~~~d~~v~iw~~~~~~~~~----~~~~~~~~~~v~~l~~~-~~~~l~s~~~d  672 (683)
                      ....+.+|...|++++|+|+  +++|++++.||.|++||+.+++...    .+....|...|++++|+ ++++|++++.|
T Consensus       277 ~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  356 (366)
T 3k26_A          277 ILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDD  356 (366)
T ss_dssp             EEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred             eeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCC
Confidence            12333448889999999999  9999999999999999999886442    44442237999999999 77899999999


Q ss_pred             CcEEEEeec
Q psy15995        673 CNTKIWEIA  681 (683)
Q Consensus       673 ~~v~vw~~~  681 (683)
                      |.|++|++.
T Consensus       357 g~i~iwd~~  365 (366)
T 3k26_A          357 ASIWRWDRL  365 (366)
T ss_dssp             SEEEEEEC-
T ss_pred             CEEEEEEec
Confidence            999999985

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=6.2e-38  Score=312.70  Aligned_cols=301  Identities=14%  Similarity=0.172  Sum_probs=227.8

Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce--eeeccccccCeEEEEECC-CCCEEEEEcCCCcEEE
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF--KMTKQEHSRFVQAVRYSP-SGSHFASAGFDGKVFL  298 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i  298 (683)
                      .....+|...|++++|+|.++.+|++|+.||.|++||+.+++.  ...+.+|...|++++|+| ++++|++++.||+|++
T Consensus       112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i  191 (435)
T 4e54_B          112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL  191 (435)
T ss_dssp             CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred             cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence            4456678899999999997665699999999999999877654  445568999999999998 6889999999999999


Q ss_pred             EeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEe
Q psy15995        299 YDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVS  378 (683)
Q Consensus       299 w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  378 (683)
                      ||++++..........+...+.+++|+|++++|++++.||.|++||++...                             
T Consensus       192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-----------------------------  242 (435)
T 4e54_B          192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-----------------------------  242 (435)
T ss_dssp             EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-----------------------------
T ss_pred             eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-----------------------------
Confidence            999877655544433355678899999999999999999999999986432                             


Q ss_pred             cCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCC-EEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCe
Q psy15995        379 LSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRG-TVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGEL  457 (683)
Q Consensus       379 ~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~  457 (683)
                                      +..+.+|...|.+++|+|++. ++++++.|+.|++||+++.+.......               
T Consensus       243 ----------------~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~---------------  291 (435)
T 4e54_B          243 ----------------LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLY---------------  291 (435)
T ss_dssp             ----------------CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSB---------------
T ss_pred             ----------------eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEE---------------
Confidence                            133567999999999999876 677999999999999987654332210               


Q ss_pred             EEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEE
Q psy15995        458 LYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVA  537 (683)
Q Consensus       458 l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  537 (683)
                                                                                 ...+...+.+++|+|++++|+
T Consensus       292 -----------------------------------------------------------~~~h~~~v~~~~~spdg~~l~  312 (435)
T 4e54_B          292 -----------------------------------------------------------SLPHRHPVNAACFSPDGARLL  312 (435)
T ss_dssp             -----------------------------------------------------------CCBCSSCEEECCBCTTSSEEE
T ss_pred             -----------------------------------------------------------eeeccccccceeECCCCCeeE
Confidence                                                                       011233567778889999999


Q ss_pred             EEcCCCcEEEEEcCCCccCcceeec-----CCcCeeEEEECCCCCEEEEEe------------CCCeEEEEECCCCcccc
Q psy15995        538 VGGADSKVHIYELNNKSLSPKAELD-----HLGPVTDCSFSPSNEYLVASD------------AHRKVVLYRVPDFELAH  600 (683)
Q Consensus       538 ~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~------------~d~~i~i~~~~~~~~~~  600 (683)
                      +++.||.|++||+.++.........     ....+....|+|++.+++++.            .++.|++||..+++.+.
T Consensus       313 s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~  392 (435)
T 4e54_B          313 TTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMC  392 (435)
T ss_dssp             EEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEE
T ss_pred             EEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEE
Confidence            9999999999998876544222110     111233455666666666553            34579999999998876


Q ss_pred             ccceeeecccEEEE-EecCCCCeEEEeecCCcEEEEeCCCCcee
Q psy15995        601 NKEWGFHSAKVNCV-AWSPDSALVASGSLDTTIIIWSLASPAKH  643 (683)
Q Consensus       601 ~~~~~~h~~~v~~~-~~s~d~~~l~~~~~d~~v~iw~~~~~~~~  643 (683)
                      ..... |...|.++ +|+|+|++||+|+ |+.|+||++++++.+
T Consensus       393 ~l~~~-~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r  434 (435)
T 4e54_B          393 QLYDP-ESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR  434 (435)
T ss_dssp             EECCS-SCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred             EEeCC-CCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence            54333 88889887 6999999999987 789999999987653

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=2.5e-37  Score=306.13  Aligned_cols=294  Identities=13%  Similarity=0.145  Sum_probs=248.9

Q ss_pred             cccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCc------ccccccCcccceEEEEECCC----C---cEEEEecCC
Q psy15995         41 RTQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPA------ISDIYTEHSCAVNVAKYSPS----G---FYIASGDIS  106 (683)
Q Consensus        41 ~~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~------~~~~~~~h~~~v~~~~~s~d----~---~~las~~~d  106 (683)
                      ..+.+.+.+++|+|  ++|+++ .++.|++||+++++      ....+.+|...|++++|+|+    +   ++|++++.|
T Consensus        13 ~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d   90 (397)
T 1sq9_A           13 KAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS   90 (397)
T ss_dssp             SCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETT
T ss_pred             hhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCC
Confidence            35677999999999  666666 68999999999988      67788899999999999999    9   999999999


Q ss_pred             CCEEEEeCCCccc-----ccccccccCCCCcccceeeeeecceeeeEee----ccceE-EEeecCCccEEEEeccc----
Q psy15995        107 GKVRIWDTVNKEH-----ILKNEFHPIGGPIKDIGTLLSLTSIRNILVL----SIGFY-IASGDISGKVRIWDTVN----  172 (683)
Q Consensus       107 g~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s----~~~~~-l~~~~~d~~i~iwd~~~----  172 (683)
                      |.|++||+.+++.     +..+..+...         .....+.+++|+    |++.+ |++++.||.|++||+.+    
T Consensus        91 g~i~iw~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  161 (397)
T 1sq9_A           91 GDLLFYRITREDETKKVIFEKLDLLDSD---------MKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE  161 (397)
T ss_dssp             SCEEEEEEEECTTTCCEEEEEECCSCTT---------GGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred             CCEEEEEccCCcccccccceeecccccc---------cCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence            9999999998876     4444443100         001679999999    99999 99999999999999998    


Q ss_pred             --cceee-----eccc-----cccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeec---C---CcCeEE
Q psy15995        173 --KEHIL-----KNEF-----HPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISG---Q---SKPINS  234 (683)
Q Consensus       173 --~~~~~-----~~~~-----~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~v~~  234 (683)
                        ++.+.     ....     ..+...|.+++|+|++ .+++++.++  .+.+|+..+++.+..+..   |   ...|.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~  238 (397)
T 1sq9_A          162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG--TVQISELSTLRPLYNFESQHSMINNSNSIRS  238 (397)
T ss_dssp             HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS--EEEEEETTTTEEEEEEECCC---CCCCCEEE
T ss_pred             cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC--cEEEEECCCCceeEEEeccccccccCCccce
Confidence              65543     3322     4467899999999999 777776654  378999999999999999   9   999999


Q ss_pred             EEeecCCCeEEEEeeCC---CeEEEEcCCCCceeeeccc-------------cccCeEEEEECCCCCEEEEEcCCCcEEE
Q psy15995        235 CDFKPSRPFRIITGSED---NTIAVFEGPPFKFKMTKQE-------------HSRFVQAVRYSPSGSHFASAGFDGKVFL  298 (683)
Q Consensus       235 ~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~dg~i~i  298 (683)
                      ++|+|++.+ |++++.|   +.|++||+.+++.+..+..             |...|.+++|+|++++|++++.||.|++
T Consensus       239 i~~~~~~~~-l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  317 (397)
T 1sq9_A          239 VKFSPQGSL-LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRF  317 (397)
T ss_dssp             EEECSSTTE-EEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred             EEECCCCCE-EEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEE
Confidence            999999985 9999999   9999999999999999988             9999999999999999999999999999


Q ss_pred             EeCCCCeeEEeccCC----cc---------------ccCeEEEEEccCC----------CEEEEEECCCcEEEEECCCCc
Q psy15995        299 YDGASADLVSELGNP----AH---------------KGGVYAVAWKPDG----------TQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       299 w~~~~~~~~~~~~~~----~~---------------~~~i~~~~~~~~~----------~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      ||+.+++.+..+...    .|               ...|.+++|+|++          ++|++++.||.|++|++.+++
T Consensus       318 wd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~  397 (397)
T 1sq9_A          318 WDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK  397 (397)
T ss_dssp             EETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred             EEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence            999999998888711    26               8999999999998          799999999999999998763

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=1.8e-37  Score=304.29  Aligned_cols=290  Identities=16%  Similarity=0.127  Sum_probs=247.4

Q ss_pred             cCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCc--ccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccc
Q psy15995         43 QRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPA--ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH  119 (683)
Q Consensus        43 ~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~--~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~  119 (683)
                      +.+.+.+++|+|++++|+++ .++.|++||+++++  .+..+.+|...|++++|+|++++|++++.||.|++||+.+++.
T Consensus         7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~   86 (372)
T 1k8k_C            7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW   86 (372)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred             cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCee
Confidence            55789999999999999998 78999999999987  7888999999999999999999999999999999999988764


Q ss_pred             ccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEecccccee--eeccccccCCCeeEEEEcCCC
Q psy15995        120 ILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHI--LKNEFHPIGGPIKDIAWSPDN  197 (683)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~i~~~~~s~~~  197 (683)
                      ........            +...+.+++|+|++++|++++.|+.|++||+..++..  .......|...|.+++|+|++
T Consensus        87 ~~~~~~~~------------~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  154 (372)
T 1k8k_C           87 KPTLVILR------------INRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS  154 (372)
T ss_dssp             EEEEECCC------------CSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS
T ss_pred             eeeEEeec------------CCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC
Confidence            44332221            1267899999999999999999999999999887631  223335567899999999999


Q ss_pred             CeEEEEecCCceEEEEEEc------------------cCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcC
Q psy15995        198 QRMVVVGEGRERFGHVFMS------------------ETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG  259 (683)
Q Consensus       198 ~~l~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~  259 (683)
                      +++++++.++.  +.+|+.                  ..++.+..+..|...|.+++|+|++++ +++++.|+.|++||+
T Consensus       155 ~~l~~~~~dg~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~i~d~  231 (372)
T 1k8k_C          155 VLLAAGSCDFK--CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSR-VAWVSHDSTVCLADA  231 (372)
T ss_dssp             SEEEEEETTSC--EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSE-EEEEETTTEEEEEEG
T ss_pred             CEEEEEcCCCC--EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCE-EEEEeCCCEEEEEEC
Confidence            99999887654  688884                  367788888999999999999999985 999999999999999


Q ss_pred             CCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCC--CeeE------------------------------
Q psy15995        260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS--ADLV------------------------------  307 (683)
Q Consensus       260 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~--~~~~------------------------------  307 (683)
                      .+++.+..+..|...|.+++|+|++++++++ .|+.|++|++.+  ++..                              
T Consensus       232 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (372)
T 1k8k_C          232 DKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKAS  310 (372)
T ss_dssp             GGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-
T ss_pred             CCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccc
Confidence            9999999999999999999999999988887 799999999987  4310                              


Q ss_pred             --------EeccCCccccCeEEEEEc-cCC---CEEEEEECCCcEEEEECCCCc
Q psy15995        308 --------SELGNPAHKGGVYAVAWK-PDG---TQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       308 --------~~~~~~~~~~~i~~~~~~-~~~---~~l~~~~~dg~i~iwd~~~~~  349 (683)
                              ..+. .+|...|.+++|. +++   ++|++++.||.|++|++.+++
T Consensus       311 ~~~~~~~~~~~~-~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~  363 (372)
T 1k8k_C          311 SEGSAAAGAGLD-SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE  363 (372)
T ss_dssp             --------CCCS-SSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred             cccCcccccccc-ccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence                    1111 2599999999976 566   899999999999999987654

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-37  Score=312.04  Aligned_cols=384  Identities=16%  Similarity=0.206  Sum_probs=277.0

Q ss_pred             EECCCCcEEEEecCCCCEEEEeCCCccccccc-ccccCCCCcccceeeeeecceeeeEeec-cceEEEeecCCccEEEEe
Q psy15995         92 KYSPSGFYIASGDISGKVRIWDTVNKEHILKN-EFHPIGGPIKDIGTLLSLTSIRNILVLS-IGFYIASGDISGKVRIWD  169 (683)
Q Consensus        92 ~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iwd  169 (683)
                      .|+|+++.+++++      .|+ .+++.+..+ ..|.              ..|.+++|+| ++++||+|+.||+|++||
T Consensus        34 ~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~--------------~~V~~~~~s~~~~~~l~s~s~dg~v~vwd   92 (437)
T 3gre_A           34 EFGPIQEIVRSPN------MGN-LRGKLIATLMENEP--------------NSITSSAVSPGETPYLITGSDQGVIKIWN   92 (437)
T ss_dssp             GGCCCCCCCCCCC------GGG-CCCCEEEEECTTTT--------------SCEEEEEEECSSSCEEEEEETTSEEEEEE
T ss_pred             hcCCccccccccc------ccc-ccceEEeeeccCCC--------------CceEEEEECCCCCCEEEEecCCceEEEeE
Confidence            4788888888765      388 455666666 5554              7899999999 999999999999999999


Q ss_pred             ccc---cceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc---CCCceeeeecCCcCeEEEEeecCCCe
Q psy15995        170 TVN---KEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE---TGTSVGEISGQSKPINSCDFKPSRPF  243 (683)
Q Consensus       170 ~~~---~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~  243 (683)
                      +.+   +..........|.+.|.+++|+|+++++++++.++.  +.+|+.+   .++....+..|  .+..+.|+|++  
T Consensus        93 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~--i~vwd~~~~~~~~~~~~~~~~--~i~~~~~~~~~--  166 (437)
T 3gre_A           93 LKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQ--IIVLKVNHYQQESEVKFLNCE--CIRKINLKNFG--  166 (437)
T ss_dssp             HHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSE--EEEEEEEEEEETTEEEEEEEE--EEEEEEGGGGS--
T ss_pred             CcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCE--EEEEEeccccCCceeeccccc--eeEEEEccCcc--
Confidence            987   432211222247899999999999999999887754  6778774   55555555554  55566665542  


Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEE--ECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEE
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVR--YSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYA  321 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~  321 (683)
                                                 +...+.++.  +++++++|++++.||.|++||+++++.+..+..+.|...|.+
T Consensus       167 ---------------------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~  219 (437)
T 3gre_A          167 ---------------------------KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSS  219 (437)
T ss_dssp             ---------------------------SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEE
T ss_pred             ---------------------------cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEE
Confidence                                       334455555  678999999999999999999999999998876558899999


Q ss_pred             EEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeec
Q psy15995        322 VAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGH  401 (683)
Q Consensus       322 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~  401 (683)
                      ++|+|++++|++++.||.|++||+++++.+..+.                                           ..|
T Consensus       220 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------------------------------------~~~  256 (437)
T 3gre_A          220 ICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWS-------------------------------------------FGD  256 (437)
T ss_dssp             EEECTTSCEEEEEETTSCEEEEETTTTEEEEEEB-------------------------------------------CTT
T ss_pred             EEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEe-------------------------------------------cCC
Confidence            9999999999999999999999999876654431                                           146


Q ss_pred             cccEEEEEEeC----CCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe--CCeEEEEEcCCeEEEEeCCCC
Q psy15995        402 NKPITALALSP----DRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLSSN  475 (683)
Q Consensus       402 ~~~v~~~~~~~----~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~~~~~~~  475 (683)
                      ..+|.+++++|    ++.+|++++.||.|++||+.+++....+ ..|...+..+.+.  +..+    .+           
T Consensus       257 ~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l----~~-----------  320 (437)
T 3gre_A          257 HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAF-INSDEQPSMEHFLPIEKGL----EE-----------  320 (437)
T ss_dssp             CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEE-ESSSSCCCGGGGSCBCSSG----GG-----------
T ss_pred             CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEE-EcCCCCCccceeccccccc----cc-----------
Confidence            67899996654    6789999999999999999988776655 3344333322222  1100    00           


Q ss_pred             cccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCcc
Q psy15995        476 AYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSL  555 (683)
Q Consensus       476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  555 (683)
                                                           .......+...+.+++++ ++++|++++.|+.|++||+.+++.
T Consensus       321 -------------------------------------~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~  362 (437)
T 3gre_A          321 -------------------------------------LNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSS  362 (437)
T ss_dssp             -------------------------------------CCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGG
T ss_pred             -------------------------------------ceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCccc
Confidence                                                 000011244568999999 789999999999999999999887


Q ss_pred             Ccceeec--CCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCC--CCeEEEeecCCc
Q psy15995        556 SPKAELD--HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPD--SALVASGSLDTT  631 (683)
Q Consensus       556 ~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d--~~~l~~~~~d~~  631 (683)
                      .......  ....+....++++..+++..        |+........  ....|...|++++|+++  +.+|++|+.||.
T Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~--~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~  432 (437)
T 3gre_A          363 SKAVISPSRFSDVFIPTQVTANLTMLLRK--------MKRTSTHSVD--DSLYHHDIINSISTCEVDETPLLVACDNSGL  432 (437)
T ss_dssp             CEEEECC--CCCEEEEEEEETTEEEEEEE--------CC---------------CCCEEEEEEEESSSSEEEEEEETTSC
T ss_pred             ceEEecccccCceEEEEEeecceEEEEEe--------cccccccccC--cccccccceeeEeeeccCCceEEEEEcCCce
Confidence            6444321  33445566666666655544        2222222222  22239999999999998  789999999999


Q ss_pred             EEEEe
Q psy15995        632 IIIWS  636 (683)
Q Consensus       632 v~iw~  636 (683)
                      |++|+
T Consensus       433 I~iw~  437 (437)
T 3gre_A          433 IGIFQ  437 (437)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            99995

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-36  Score=290.93  Aligned_cols=293  Identities=16%  Similarity=0.195  Sum_probs=249.8

Q ss_pred             CcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccce
Q psy15995         75 PAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF  154 (683)
Q Consensus        75 ~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  154 (683)
                      .+..+.+.+|.+.|++++| |++++|++++.||.|++||+.+++....+..+.              ..+.+++|+|+++
T Consensus         8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~--------------~~v~~~~~~~~~~   72 (313)
T 3odt_A            8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQ--------------GFLNSVCYDSEKE   72 (313)
T ss_dssp             CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECS--------------SCEEEEEEETTTT
T ss_pred             HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCC--------------ccEEEEEECCCCC
Confidence            3677889999999999999 999999999999999999999887776666554              7899999999999


Q ss_pred             EEEeecCCccEEEEeccccce-eeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeE
Q psy15995        155 YIASGDISGKVRIWDTVNKEH-ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPIN  233 (683)
Q Consensus       155 ~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  233 (683)
                      +|++++.||.|++|++..... .....+..|...|.+++|  +++++++++.++.  +.+|+  .++....+..|...+.
T Consensus        73 ~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~--i~~~d--~~~~~~~~~~~~~~v~  146 (313)
T 3odt_A           73 LLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKT--AKVWK--EGSLVYNLQAHNASVW  146 (313)
T ss_dssp             EEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSE--EEEEE--TTEEEEEEECCSSCEE
T ss_pred             EEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCC--EEEEc--CCcEEEecccCCCcee
Confidence            999999999999999876531 123445678899999999  5778888887753  55555  8888889999999999


Q ss_pred             EEEeec-CCCeEEEEeeCCCeEEEEcCCCCceeeeccc-cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEecc
Q psy15995        234 SCDFKP-SRPFRIITGSEDNTIAVFEGPPFKFKMTKQE-HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG  311 (683)
Q Consensus       234 ~~~~~~-~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  311 (683)
                      ++.|.| +++ .+++++.|+.|++||  ..+....+.. |...+.+++|+|++. +++++.||.|++||+++++.+..+.
T Consensus       147 ~~~~~~~~~~-~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~  222 (313)
T 3odt_A          147 DAKVVSFSEN-KFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE  222 (313)
T ss_dssp             EEEEEETTTT-EEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             EEEEccCCCC-EEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh
Confidence            999999 666 599999999999999  4555666666 899999999999998 9999999999999999999998887


Q ss_pred             CCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCC
Q psy15995        312 NPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP  391 (683)
Q Consensus       312 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~  391 (683)
                      .  |...|.+++|+|++ .+++++.||.|++||+++++....                                      
T Consensus       223 ~--~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~--------------------------------------  261 (313)
T 3odt_A          223 G--HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQV--------------------------------------  261 (313)
T ss_dssp             C--CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEE--------------------------------------
T ss_pred             c--CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEE--------------------------------------
Confidence            5  99999999999999 599999999999999998765443                                      


Q ss_pred             CcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceec
Q psy15995        392 STPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       392 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~  440 (683)
                            +..|...|.+++|+|+++ +++++.||.|++||+.+++.....
T Consensus       262 ------~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~  303 (313)
T 3odt_A          262 ------ITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASED  303 (313)
T ss_dssp             ------EECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred             ------EeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehh
Confidence                  355778899999999998 667899999999999887655443

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.7e-38  Score=303.81  Aligned_cols=320  Identities=12%  Similarity=0.125  Sum_probs=251.9

Q ss_pred             cCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc
Q psy15995        184 IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK  263 (683)
Q Consensus       184 ~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  263 (683)
                      ....|.+++|+|||+++|+++.+.    .+.+   ++....+.+|...|.+++|+|+|        .++.+.+|+.+.. 
T Consensus        14 ~~~~v~sv~~SpDG~~iASas~D~----TV~d---~~~~~~l~gh~~~v~~V~FsPdg--------~~~~~~~~~~~~~-   77 (588)
T 2j04_A           14 FEDWKNNLTWARDGTLYLTTFPDI----SIGQ---PKYAKDINCNSKNLFHVKEFPLE--------FENKLDFELAQQN-   77 (588)
T ss_dssp             CSSSSCCEEECTTSCEEEECSSSE----EEEE---ECCCSCCSSBGGGTEEEEEECCC--------CCCTTTTSCCCSS-
T ss_pred             hhccEEEEEECCCCCEEEEEcCCc----eeec---ccccceecCCCccEEEEEECCCC--------CcceEEEEeCCCc-
Confidence            448899999999999999998884    4444   34444557999999999999998        4566555554322 


Q ss_pred             eeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccc-----cCeEEEEEccCCCEEEEEECCC
Q psy15995        264 FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHK-----GGVYAVAWKPDGTQLLTASGDK  338 (683)
Q Consensus       264 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~dg  338 (683)
                      ....+ .|...|.+++|+|+|++||+++.||.|++||.+.  .+..+.   |.     ..+.+++|+|||++|++++.||
T Consensus        78 ~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~---~~~~~~~~sv~svafSPDG~~LAsgs~DG  151 (588)
T 2j04_A           78 GLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD---SKGNLSSRTYHCFEWNPIESSIVVGNEDG  151 (588)
T ss_dssp             CSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC---CSSCSTTTCEEEEEECSSSSCEEEEETTS
T ss_pred             eEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc---CCCccccccEEEEEEcCCCCEEEEEcCCC
Confidence            22222 4588999999999999999999999999999544  444443   33     3699999999999999999999


Q ss_pred             cEEEEECCCCce-------eeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEe
Q psy15995        339 TCKLWDIETKSV-------VSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALS  411 (683)
Q Consensus       339 ~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~  411 (683)
                      +|++||+.++..       +.++.                                        ....+|...|.+++|+
T Consensus       152 tVkIWd~~~~~l~~~~~i~l~ti~----------------------------------------~~~~gh~~~V~sVawS  191 (588)
T 2j04_A          152 ELQFFSIRKNSENTPEFYFESSIR----------------------------------------LSDAGSKDWVTHIVWY  191 (588)
T ss_dssp             EEEEEECCCCTTTCCCCEEEEEEE----------------------------------------CSCTTCCCCEEEEEEE
T ss_pred             EEEEEECCCCccccccceeeeeee----------------------------------------cccccccccEEEEEEc
Confidence            999999998642       11111                                        0124578899999999


Q ss_pred             CCCCEEEEEeCCCcEEEEcCCCCCcc---eeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCC
Q psy15995        412 PDRGTVFTGSHDGFITRWNAKTGEND---RVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQP  488 (683)
Q Consensus       412 ~~~~~l~~~~~dg~i~~w~~~~~~~~---~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~  488 (683)
                      |+|  +++++.|+.|++||+..+...   .....+|...|.+++|.++.+++++ ++.|++|++.+...           
T Consensus       192 Pdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~-----------  257 (588)
T 2j04_A          192 EDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYSI-----------  257 (588)
T ss_dssp             TTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTEE-----------
T ss_pred             CCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCeE-----------
Confidence            999  888899999999999887743   2333468889999999988888887 79999999987532           


Q ss_pred             ceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEE--ccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcC
Q psy15995        489 RGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISL--DHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGP  566 (683)
Q Consensus       489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~  566 (683)
                                               ......+...+..+++  +|++..++++++||+ ++|..+               
T Consensus       258 -------------------------~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d---------------  296 (588)
T 2j04_A          258 -------------------------SSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED---------------  296 (588)
T ss_dssp             -------------------------EEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS---------------
T ss_pred             -------------------------EEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec---------------
Confidence                                     1222246678899999  999999999999999 999876               


Q ss_pred             eeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeec
Q psy15995        567 VTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSL  628 (683)
Q Consensus       567 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~  628 (683)
                        .++++||+..+++.  |+++++|+...+...   .+. +...|.+++|||||+.+|+++.
T Consensus       297 --~~~~spd~~l~a~~--d~~v~lW~~~g~~l~---~~~-~~~~I~~va~SPdG~~lA~~~~  350 (588)
T 2j04_A          297 --ELHVTADNIIAPYL--EKKFKKWSTIWNEFN---NYE-TTLVIHGISLSPDGYSIAIVYD  350 (588)
T ss_dssp             --SEEEECCCSSHHHH--HHHHHHTTTTTTSSS---SSC-CEEEEEEEEECTTSSEEEEEEE
T ss_pred             --cEEECCCceEEEEc--CCEEEEEECCCCcee---eec-cceEEEEEEECCCCCEEEEEEe
Confidence              15699999988875  899999998666532   223 4677999999999999998863

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.4e-36  Score=299.86  Aligned_cols=292  Identities=17%  Similarity=0.291  Sum_probs=239.1

Q ss_pred             ecCCcC--eEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc-cccCeEEEEECCCCCEEEEEcCCCcEEEEeCC
Q psy15995        226 SGQSKP--INSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE-HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGA  302 (683)
Q Consensus       226 ~~~~~~--v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  302 (683)
                      .+|...  +.++.|+++  . +++++.|+.|++||..+++....+.. |...|.+++|+|++++|++++.||.|++||+.
T Consensus        88 ~~~~~~~~~~~~~~s~~--~-l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~  164 (401)
T 4aez_A           88 PGIIDDYYLNLLDWSNL--N-VVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE  164 (401)
T ss_dssp             TTCCCCTTCBCEEECTT--S-EEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             CCCcCCceEEEEeecCC--C-EEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc
Confidence            355544  455666653  3 88899999999999999988777765 78999999999999999999999999999999


Q ss_pred             CCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCc
Q psy15995        303 SADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGF  382 (683)
Q Consensus       303 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~  382 (683)
                      +++.+..+..  |...|.+++|+  ++.+++++.||.|++||++....                                
T Consensus       165 ~~~~~~~~~~--~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~--------------------------------  208 (401)
T 4aez_A          165 SQTKLRTMAG--HQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANH--------------------------------  208 (401)
T ss_dssp             TCCEEEEECC--CSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC--------------------------------
T ss_pred             CCeEEEEecC--CCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcc--------------------------------
Confidence            9999988875  99999999994  67999999999999999985432                                


Q ss_pred             EEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEE
Q psy15995        383 ISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCG  462 (683)
Q Consensus       383 i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~  462 (683)
                                 ....+.+|...|.+++|+|++++|++++.|+.|++||+.+++...... .                   
T Consensus       209 -----------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-~-------------------  257 (401)
T 4aez_A          209 -----------QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT-N-------------------  257 (401)
T ss_dssp             -----------EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC-C-------------------
T ss_pred             -----------eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec-C-------------------
Confidence                       123456789999999999999999999999999999998765443321 1                   


Q ss_pred             cCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCC-EEEEEc-
Q psy15995        463 IDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHG-LVAVGG-  540 (683)
Q Consensus       463 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-  540 (683)
                                                                               +...+.+++++|++. ++++++ 
T Consensus       258 ---------------------------------------------------------~~~~v~~~~~~p~~~~ll~~~~g  280 (401)
T 4aez_A          258 ---------------------------------------------------------HNAAVKAVAWCPWQSNLLATGGG  280 (401)
T ss_dssp             ---------------------------------------------------------CSSCCCEEEECTTSTTEEEEECC
T ss_pred             ---------------------------------------------------------CcceEEEEEECCCCCCEEEEecC
Confidence                                                                     233578889999764 555554 


Q ss_pred             -CCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEE--eCCCeEEEEECCCCccccccceeeecccEEEEEec
Q psy15995        541 -ADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVAS--DAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWS  617 (683)
Q Consensus       541 -~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s  617 (683)
                       .|+.|++||+.+++.....  .+...|.+++|+|++++++++  +.||.|++|++.+++........+|...|.+++|+
T Consensus       281 s~d~~i~i~d~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s  358 (401)
T 4aez_A          281 TMDKQIHFWNAATGARVNTV--DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALS  358 (401)
T ss_dssp             TTTCEEEEEETTTCCEEEEE--ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEEC
T ss_pred             CCCCEEEEEECCCCCEEEEE--eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEEC
Confidence             7999999999988766433  477889999999999999994  48999999999998777666666799999999999


Q ss_pred             CCCCeEEEeecCCcEEEEeCCCCceeeEe
Q psy15995        618 PDSALVASGSLDTTIIIWSLASPAKHIII  646 (683)
Q Consensus       618 ~d~~~l~~~~~d~~v~iw~~~~~~~~~~~  646 (683)
                      |++++|++++.||.|++|++.+++.....
T Consensus       359 ~dg~~l~s~~~dg~i~iw~~~~~~~~~~~  387 (401)
T 4aez_A          359 PDGRILSTAASDENLKFWRVYDGDHVKRP  387 (401)
T ss_dssp             TTSSEEEEECTTSEEEEEECCC-------
T ss_pred             CCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence            99999999999999999999998876554

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.7e-36  Score=299.21  Aligned_cols=287  Identities=18%  Similarity=0.234  Sum_probs=243.6

Q ss_pred             eEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccC-cccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccc
Q psy15995         47 PIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTE-HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        47 ~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~-h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      +.++++++ +.+++.+.++.|++||+++++....+.. |...|++++|+|++++|++|+.||.|++||+.+++.+..+..
T Consensus        96 ~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  174 (401)
T 4aez_A           96 LNLLDWSN-LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG  174 (401)
T ss_dssp             CBCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred             EEEEeecC-CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecC
Confidence            34577776 4567777899999999999988777765 899999999999999999999999999999999988877766


Q ss_pred             ccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEec
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE  205 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  205 (683)
                      |.              ..+.+++|  ++.+|++++.||.|++||+..... ....+..|.+.|.+++|+|+++++++++.
T Consensus       175 ~~--------------~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  237 (401)
T 4aez_A          175 HQ--------------ARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANH-QIGTLQGHSSEVCGLAWRSDGLQLASGGN  237 (401)
T ss_dssp             CS--------------SCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC-EEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             CC--------------CceEEEEE--CCCEEEEEcCCCCEEEEecccCcc-eeeEEcCCCCCeeEEEEcCCCCEEEEEeC
Confidence            55              67888888  567999999999999999985432 23445668899999999999999999987


Q ss_pred             CCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEee--CCCeEEEEcCCCCceeeeccccccCeEEEEECCC
Q psy15995        206 GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGS--EDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPS  283 (683)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~  283 (683)
                      ++.  +.+|+..+++....+..|...|.+++|+|++..++++++  .|+.|++||+.+++....+. +...|.+++|+|+
T Consensus       238 d~~--v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~  314 (401)
T 4aez_A          238 DNV--VQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPH  314 (401)
T ss_dssp             TSC--EEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSS
T ss_pred             CCe--EEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCC
Confidence            654  789999999999999999999999999998887677765  79999999999999888775 6678999999999


Q ss_pred             CCEEEE--EcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEE
Q psy15995        284 GSHFAS--AGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEF  354 (683)
Q Consensus       284 ~~~l~~--~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  354 (683)
                      ++.+++  |+.||.|++|++.+++.........|...|.+++|+|++++|++++.||.|++|++.+++.+...
T Consensus       315 ~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~  387 (401)
T 4aez_A          315 SKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP  387 (401)
T ss_dssp             SSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred             CCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence            999998  44899999999999776666544459999999999999999999999999999999998876554

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.4e-36  Score=287.57  Aligned_cols=289  Identities=17%  Similarity=0.207  Sum_probs=239.6

Q ss_pred             CCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcE
Q psy15995        261 PFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTC  340 (683)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i  340 (683)
                      ..+....+.+|...|.+++| |++++|++++.||.|++||+.+++....+..  |...|.+++|+|+++++++++.||.+
T Consensus         7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i   83 (313)
T 3odt_A            7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYT--GQGFLNSVCYDSEKELLLFGGKDTMI   83 (313)
T ss_dssp             CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEE--CSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred             cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeec--CCccEEEEEECCCCCEEEEecCCCeE
Confidence            34677888999999999999 9999999999999999999999988888765  89999999999999999999999999


Q ss_pred             EEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEE
Q psy15995        341 KLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTG  420 (683)
Q Consensus       341 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  420 (683)
                      ++|++.....                                         ......+.+|...|.+++|  ++++++++
T Consensus        84 ~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~i~~~~~--~~~~l~~~  120 (313)
T 3odt_A           84 NGVPLFATSG-----------------------------------------EDPLYTLIGHQGNVCSLSF--QDGVVISG  120 (313)
T ss_dssp             EEEETTCCTT-----------------------------------------SCC-CEECCCSSCEEEEEE--ETTEEEEE
T ss_pred             EEEEeeecCC-----------------------------------------CCcccchhhcccCEEEEEe--cCCEEEEE
Confidence            9999976432                                         2223456778999999999  56799999


Q ss_pred             eCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEE
Q psy15995        421 SHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVT  500 (683)
Q Consensus       421 ~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (683)
                      +.||.|++||  .++..... ..                                                         
T Consensus       121 ~~d~~i~~~d--~~~~~~~~-~~---------------------------------------------------------  140 (313)
T 3odt_A          121 SWDKTAKVWK--EGSLVYNL-QA---------------------------------------------------------  140 (313)
T ss_dssp             ETTSEEEEEE--TTEEEEEE-EC---------------------------------------------------------
T ss_pred             eCCCCEEEEc--CCcEEEec-cc---------------------------------------------------------
Confidence            9999999999  22221111 11                                                         


Q ss_pred             EEeceEEEEeCCceeeeecCCCCCcEEEEcc-CCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEE
Q psy15995        501 VTVKQISIVENGAKVSSLPIDYEPSSISLDH-EHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYL  579 (683)
Q Consensus       501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  579 (683)
                                         +...+.++++.| +++++++++.||.|++||.  .+........+...+.+++|+|++. +
T Consensus       141 -------------------~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~  198 (313)
T 3odt_A          141 -------------------HNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-F  198 (313)
T ss_dssp             -------------------CSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-E
T ss_pred             -------------------CCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-E
Confidence                               223456677777 8889999999999999993  3333233334889999999999998 9


Q ss_pred             EEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEE
Q psy15995        580 VASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQ  659 (683)
Q Consensus       580 ~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~  659 (683)
                      ++++.|+.|++||+.+++.....  .+|...|++++|+|++ .|++++.||.|++||+.+++....+..  |...|++++
T Consensus       199 ~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~--~~~~i~~~~  273 (313)
T 3odt_A          199 ISCSNDGLIKLVDMHTGDVLRTY--EGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITL--PAISIWSVD  273 (313)
T ss_dssp             EEEETTSEEEEEETTTCCEEEEE--ECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEEC--SSSCEEEEE
T ss_pred             EEccCCCeEEEEECCchhhhhhh--hcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEec--cCceEEEEE
Confidence            99999999999999998876543  3499999999999999 689999999999999999998888866  678999999


Q ss_pred             EccCCeEEEeeCCCcEEEEeecc
Q psy15995        660 WLDNDLLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       660 ~~~~~~l~s~~~d~~v~vw~~~~  682 (683)
                      |+++..+++++.||.|++|++++
T Consensus       274 ~~~~~~~~~~~~dg~i~iw~~~~  296 (313)
T 3odt_A          274 CMSNGDIIVGSSDNLVRIFSQEK  296 (313)
T ss_dssp             ECTTSCEEEEETTSCEEEEESCG
T ss_pred             EccCCCEEEEeCCCcEEEEeCCC
Confidence            99555588899999999999874

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=1.6e-37  Score=300.70  Aligned_cols=288  Identities=13%  Similarity=0.080  Sum_probs=223.5

Q ss_pred             CeEEEeeCCCCCeEEEecC--------CeEEEEeCCCCccc----------ccccCcccceEEEEECCCCcEEEEe----
Q psy15995         46 QPIVLGGDPKGKNFLYTNG--------NSVIIRNIENPAIS----------DIYTEHSCAVNVAKYSPSGFYIASG----  103 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~--------~~i~v~~~~~~~~~----------~~~~~h~~~v~~~~~s~d~~~las~----  103 (683)
                      .+.+++|+|||++|++|.+        +.|++|++..+...          ..|.+|...|.+++++  ++.+++|    
T Consensus        16 PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~~   93 (365)
T 4h5i_A           16 PAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNEN   93 (365)
T ss_dssp             CEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCCC
T ss_pred             CEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECCC
Confidence            4789999999999999853        35999998765422          2367889999998865  4455554    


Q ss_pred             -------cCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEe--ecCCccEEEEeccccc
Q psy15995        104 -------DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIAS--GDISGKVRIWDTVNKE  174 (683)
Q Consensus       104 -------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~--~~~d~~i~iwd~~~~~  174 (683)
                             +.|+.+++|++.+.............     .........+..++|||||++||+  ++.|++|+|||+.+++
T Consensus        94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~  168 (365)
T 4h5i_A           94 STKITQGKGNKHLRKFKYDKVNDQLEFLTSVDF-----DASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLT  168 (365)
T ss_dssp             HHHHHHTSCCCCEEEEEEETTTTEEEEEEEECS-----SCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTE
T ss_pred             ccEEEEecCCCcEEEEEecCCCceEEEeeeece-----eecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc
Confidence                   45778999998765432221111000     000011134778999999998764  5578999999999988


Q ss_pred             eeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCcee--eeecCCcCeEEEEeecCCCeEEEEeeCCC
Q psy15995        175 HILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVG--EISGQSKPINSCDFKPSRPFRIITGSEDN  252 (683)
Q Consensus       175 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d~  252 (683)
                      .+....   +.+.|.+++|+|||+++++++.+.   ..+|...++....  ....|...|.+++|+|+++. +++++.|+
T Consensus       169 ~~~~~~---~~~~V~~v~fspdg~~l~s~s~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~-l~~~s~d~  241 (365)
T 4h5i_A          169 EKFEIE---TRGEVKDLHFSTDGKVVAYITGSS---LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTV-LIAASLKK  241 (365)
T ss_dssp             EEEEEE---CSSCCCEEEECTTSSEEEEECSSC---EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEE-EEEEEESS
T ss_pred             EEEEeC---CCCceEEEEEccCCceEEecccee---EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCE-EEEEecCC
Confidence            765543   567899999999999999988664   5677777776654  35678899999999999996 88887776


Q ss_pred             ----eEEEEcCCCCce----eeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEE
Q psy15995        253 ----TIAVFEGPPFKF----KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW  324 (683)
Q Consensus       253 ----~i~iw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~  324 (683)
                          .+++|+......    ...+.+|...|++++|+|+|++||+|+.|++|++||+++++++..+. .+|...|++++|
T Consensus       242 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~-~gH~~~V~~v~f  320 (365)
T 4h5i_A          242 GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK-QAHSFAITEVTI  320 (365)
T ss_dssp             SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET-TSSSSCEEEEEE
T ss_pred             cceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec-CcccCCEEEEEE
Confidence                688898776553    34567899999999999999999999999999999999999988753 249999999999


Q ss_pred             ccCCCEEEEEECCCcEEEEECCCC
Q psy15995        325 KPDGTQLLTASGDKTCKLWDIETK  348 (683)
Q Consensus       325 ~~~~~~l~~~~~dg~i~iwd~~~~  348 (683)
                      +||+++|++++.|++|+||++...
T Consensus       321 Spdg~~laS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          321 SPDSTYVASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             CTTSCEEEEEETTSEEEEEECCTT
T ss_pred             CCCCCEEEEEeCCCeEEEEEcCCC
Confidence            999999999999999999999654

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.8e-38  Score=310.35  Aligned_cols=321  Identities=13%  Similarity=0.151  Sum_probs=232.1

Q ss_pred             ccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCc--ccccccccccCCCCcccceeeeeecceeeeEeeccceEEEe
Q psy15995         81 YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNK--EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIAS  158 (683)
Q Consensus        81 ~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  158 (683)
                      ++.|.++|++++|+|+|++||+++.|+.|++||+.++  +.+..+..|.              ..|.+++|+|++++|++
T Consensus         7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~--------------~~v~~~~~s~~~~~l~s   72 (377)
T 3dwl_C            7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHD--------------KIVTCVDWAPKSNRIVT   72 (377)
T ss_dssp             EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCS--------------SCEEEEEECTTTCCEEE
T ss_pred             EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCC--------------ceEEEEEEeCCCCEEEE
Confidence            4457789999999999999999999999999999988  6666666554              78999999999999999


Q ss_pred             ecCCccEEEEeccccc-eeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC---ceeeeec-CCcCeE
Q psy15995        159 GDISGKVRIWDTVNKE-HILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT---SVGEISG-QSKPIN  233 (683)
Q Consensus       159 ~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~v~  233 (683)
                      ++.|+.|++||+.+++ ......+..|...|.+++|+|+++++++++.++.  +.+|+.+.++   ....+.+ |...|.
T Consensus        73 ~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--i~iwd~~~~~~~~~~~~~~~~h~~~v~  150 (377)
T 3dwl_C           73 CSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARV--ISVCYFEQENDWWVSKHLKRPLRSTIL  150 (377)
T ss_dssp             EETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSC--EEECCC-----CCCCEEECSSCCSCEE
T ss_pred             EeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCe--EEEEEECCcccceeeeEeecccCCCeE
Confidence            9999999999999876 3334456678899999999999999999987654  7788888776   4677777 999999


Q ss_pred             EEEeecCCCeEEEEeeCCCeEEEEcCC------------------CCceeeeccccccCeEEEEECCCCCEEEEEcCCCc
Q psy15995        234 SCDFKPSRPFRIITGSEDNTIAVFEGP------------------PFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGK  295 (683)
Q Consensus       234 ~~~~~~~~~~~l~~~~~d~~i~iw~~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  295 (683)
                      +++|+|++++ +++++.|+.|++||+.                  .++....+ +|...|.+++|+|++++|++++.||.
T Consensus       151 ~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~  228 (377)
T 3dwl_C          151 SLDWHPNNVL-LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSS  228 (377)
T ss_dssp             EEEECTTSSE-EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTE
T ss_pred             EEEEcCCCCE-EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCc
Confidence            9999999985 9999999999999985                  34556666 89999999999999999999999999


Q ss_pred             EEEEeCCCCee----EEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCce--eeEEEecCcce--------
Q psy15995        296 VFLYDGASADL----VSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSV--VSEFIMGNQVE--------  361 (683)
Q Consensus       296 i~iw~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~--------  361 (683)
                      |++||+.+++.    +..+..  |...|.+++|+|++++|++++.++ +.+|+......  ...+.......        
T Consensus       229 i~iwd~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (377)
T 3dwl_C          229 VTIAYPSAPEQPPRALITVKL--SQLPLRSLLWANESAIVAAGYNYS-PILLQGNESGWAHTRDLDAGTSKTSFTHTGNT  305 (377)
T ss_dssp             EC-CEECSTTSCEEECCCEEC--SSSCEEEEEEEETTEEEEEESSSS-EEEECCCC---CCSBCCCSCCCCCCBSSSSSB
T ss_pred             EEEEECCCCCCcceeeEeecC--CCCceEEEEEcCCCCEEEEEcCCc-EEEEEeCCCceEEEeeeccccccccccccccc
Confidence            99999999877    556654  889999999999999998887665 55777653221  11111000000        


Q ss_pred             ------eceEEEEecCCEEEEEecCCcEEEEecCCC-CcceeeeeeccccEEEEEEeCCC-C---EEEEEeCCCcEEEEc
Q psy15995        362 ------DQQVSCLWQGDYLLTVSLSGFISYLDVNNP-STPIRVIKGHNKPITALALSPDR-G---TVFTGSHDGFITRWN  430 (683)
Q Consensus       362 ------~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~-~---~l~~~~~dg~i~~w~  430 (683)
                            ...+.++...         ......+.... .........|...|+++++.+.. .   .+++++.||.|++||
T Consensus       306 ~~~~~~~~~~~~~~~~---------~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWd  376 (377)
T 3dwl_C          306 GEGREEEGPVSFTALR---------STFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWT  376 (377)
T ss_dssp             CCCCCC----------------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEEC
T ss_pred             cccccccccccccccc---------ccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEec
Confidence                  0000000000         11111111100 01122344699999999976644 3   699999999999998


Q ss_pred             C
Q psy15995        431 A  431 (683)
Q Consensus       431 ~  431 (683)
                      +
T Consensus       377 l  377 (377)
T 3dwl_C          377 L  377 (377)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=3.1e-36  Score=283.50  Aligned_cols=253  Identities=19%  Similarity=0.282  Sum_probs=211.4

Q ss_pred             ccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCc--ccccccccccCCCCcccceeeeeecceeeeEeecc--ce
Q psy15995         79 DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNK--EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI--GF  154 (683)
Q Consensus        79 ~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~  154 (683)
                      ..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++  +.+..+..|.              ..|.+++|+++  ++
T Consensus         3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~--------------~~V~~v~~s~~~~g~   68 (297)
T 2pm7_B            3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHE--------------GPVWRVDWAHPKFGT   68 (297)
T ss_dssp             EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCS--------------SCEEEEEECCGGGCS
T ss_pred             eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEcccc--------------CCeEEEEecCCCcCC
Confidence            457899999999999999999999999999999999753  4555555554              78999999864  89


Q ss_pred             EEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCC--CCeEEEEecCCceEEEEEEccCCC--ceeeeecCCc
Q psy15995        155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPD--NQRMVVVGEGRERFGHVFMSETGT--SVGEISGQSK  230 (683)
Q Consensus       155 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  230 (683)
                      +||+++.|++|++||+.+++......+..|...|.+++|+|+  +.++++++.++.  +.+|+.+.+.  ....+.+|..
T Consensus        69 ~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~--v~~wd~~~~~~~~~~~~~~h~~  146 (297)
T 2pm7_B           69 ILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGK--VSVVEFKENGTTSPIIIDAHAI  146 (297)
T ss_dssp             EEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSE--EEEEEBCSSSCBCCEEEECCSS
T ss_pred             EEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCc--EEEEEecCCCceeeeeeecccC
Confidence            999999999999999998754344455667899999999998  888988887754  7888887653  2456789999


Q ss_pred             CeEEEEeecCC------------CeEEEEeeCCCeEEEEcCCCCc----eeeeccccccCeEEEEECCCC---CEEEEEc
Q psy15995        231 PINSCDFKPSR------------PFRIITGSEDNTIAVFEGPPFK----FKMTKQEHSRFVQAVRYSPSG---SHFASAG  291 (683)
Q Consensus       231 ~v~~~~~~~~~------------~~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~~~~v~~~~~~~~~---~~l~~~~  291 (683)
                      .|.+++|+|++            ...|++++.|++|++||+++++    ....+.+|...|.+++|+|++   ++|++++
T Consensus       147 ~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s  226 (297)
T 2pm7_B          147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS  226 (297)
T ss_dssp             CEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred             ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE
Confidence            99999999973            1259999999999999987765    566788999999999999985   7999999


Q ss_pred             CCCcEEEEeCCCCe---eEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCC
Q psy15995        292 FDGKVFLYDGASAD---LVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIET  347 (683)
Q Consensus       292 ~dg~i~iw~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  347 (683)
                      .|++|++||+++..   ....+....|...|.+++|+|++++|++++.|+.|++|+...
T Consensus       227 ~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~  285 (297)
T 2pm7_B          227 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  285 (297)
T ss_dssp             TTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred             CCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence            99999999987643   122332234788999999999999999999999999999864

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=6.4e-37  Score=299.83  Aligned_cols=295  Identities=14%  Similarity=0.209  Sum_probs=245.0

Q ss_pred             cccCcccceEEEEECCC----CcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeecc---
Q psy15995         80 IYTEHSCAVNVAKYSPS----GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI---  152 (683)
Q Consensus        80 ~~~~h~~~v~~~~~s~d----~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---  152 (683)
                      ...+|.++|++++|+|+    ...+++++.++.|++||+.+++.+..+..+...         .+...+.+++|+|+   
T Consensus        13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~   83 (366)
T 3k26_A           13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDA---------DADENFYTCAWTYDSNT   83 (366)
T ss_dssp             EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECS---------CTTCCEEEEEEEECTTT
T ss_pred             eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeecccc---------CCCCcEEEEEeccCCCC
Confidence            34589999999999984    445556666679999999988776665543211         12266999999999   


Q ss_pred             -ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcC-CCCeEEEEecCCceEEEEEEccCCCceeee---ec
Q psy15995        153 -GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSP-DNQRMVVVGEGRERFGHVFMSETGTSVGEI---SG  227 (683)
Q Consensus       153 -~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~  227 (683)
                       +.+|++++.||.|++||+.+++.+.  .+..|...|.+++|+| +++++++++.++.  +.+|+.++++.+..+   .+
T Consensus        84 ~~~~l~~~~~dg~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~  159 (366)
T 3k26_A           84 SHPLLAVAGSRGIIRIINPITMQCIK--HYVGHGNAINELKFHPRDPNLLLSVSKDHA--LRLWNIQTDTLVAIFGGVEG  159 (366)
T ss_dssp             CCEEEEEEETTCEEEEECTTTCCEEE--EEESCCSCEEEEEECSSCTTEEEEEETTSC--EEEEETTTTEEEEEECSTTS
T ss_pred             CCCEEEEecCCCEEEEEEchhceEee--eecCCCCcEEEEEECCCCCCEEEEEeCCCe--EEEEEeecCeEEEEeccccc
Confidence             7899999999999999999887654  4556789999999999 8999998887654  789999999888887   78


Q ss_pred             CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc----------------------------cccCeEEEE
Q psy15995        228 QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE----------------------------HSRFVQAVR  279 (683)
Q Consensus       228 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~----------------------------~~~~v~~~~  279 (683)
                      |...|.+++|+|++.. +++++.||.|++||+++++....+..                            |...|.+++
T Consensus       160 ~~~~v~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  238 (366)
T 3k26_A          160 HRDEVLSADYDLLGEK-IMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR  238 (366)
T ss_dssp             CSSCEEEEEECTTSSE-EEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE
T ss_pred             ccCceeEEEECCCCCE-EEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEE
Confidence            9999999999999985 99999999999999988776554443                            999999999


Q ss_pred             ECCCCCEEEEEcCCCcEEEEeCCCCee--------------EEeccCCccccCeEEEEEccC--CCEEEEEECCCcEEEE
Q psy15995        280 YSPSGSHFASAGFDGKVFLYDGASADL--------------VSELGNPAHKGGVYAVAWKPD--GTQLLTASGDKTCKLW  343 (683)
Q Consensus       280 ~~~~~~~l~~~~~dg~i~iw~~~~~~~--------------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iw  343 (683)
                      |+  ++++++++.||.|++||+.+++.              +..+..  |...|.+++|+|+  +++|++++.||.|++|
T Consensus       239 ~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vw  314 (366)
T 3k26_A          239 WL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDY--SQCDIWYMRFSMDFWQKMLALGNQVGKLYVW  314 (366)
T ss_dssp             EE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC--SSCCSSCCCCEECTTSSEEEEECTTSCEEEE
T ss_pred             Ec--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccc--cCCcEEEEEEcCCCCCcEEEEEecCCcEEEE
Confidence            98  77999999999999999887643              555543  8889999999999  9999999999999999


Q ss_pred             ECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeec--cccEEEEEEeCCCCEEEEEe
Q psy15995        344 DIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGH--NKPITALALSPDRGTVFTGS  421 (683)
Q Consensus       344 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~  421 (683)
                      |+.+++....                                        ....+..|  ...|++++|+|++++|++++
T Consensus       315 d~~~~~~~~~----------------------------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~  354 (366)
T 3k26_A          315 DLEVEDPHKA----------------------------------------KCTTLTHHKCGAAIRQTSFSRDSSILIAVC  354 (366)
T ss_dssp             ECCSSSGGGC----------------------------------------EEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred             ECCCCCCccc----------------------------------------cceEEcccccCCceEEEEeCCCCCeEEEEe
Confidence            9998764321                                        11234455  78999999999999999999


Q ss_pred             CCCcEEEEcCC
Q psy15995        422 HDGFITRWNAK  432 (683)
Q Consensus       422 ~dg~i~~w~~~  432 (683)
                      .||.|++||+.
T Consensus       355 ~dg~i~iwd~~  365 (366)
T 3k26_A          355 DDASIWRWDRL  365 (366)
T ss_dssp             TTSEEEEEEC-
T ss_pred             CCCEEEEEEec
Confidence            99999999985

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=7.5e-36  Score=296.40  Aligned_cols=283  Identities=18%  Similarity=0.296  Sum_probs=241.4

Q ss_pred             EEEeeCCCCCeEEEecCCeEEEEeCCCCccccccc--CcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccc
Q psy15995         48 IVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYT--EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        48 ~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~--~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      ..++||++ ++||++.|+.|+|||..+++..+.+.  +|...|++++|+|||++||+|+.||+|+|||+.+++.+..+..
T Consensus       109 ~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~  187 (420)
T 4gga_A          109 NLVDWSSG-NVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS  187 (420)
T ss_dssp             BCEEECTT-SEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred             eeEEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeC
Confidence            45889986 58999999999999999998776654  6788999999999999999999999999999999998888776


Q ss_pred             ccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEec
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE  205 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  205 (683)
                      |.              ..+.+  ++.++..|++|+.|+.+++||....... ...+..|...+..+.|+|+++++++++.
T Consensus       188 h~--------------~~v~~--~s~~~~~l~sgs~d~~i~~~d~~~~~~~-~~~~~~h~~~~~~~~~~~~g~~l~s~~~  250 (420)
T 4gga_A          188 HS--------------ARVGS--LSWNSYILSSGSRSGHIHHHDVRVAEHH-VATLSGHSQEVCGLRWAPDGRHLASGGN  250 (420)
T ss_dssp             CS--------------SCEEE--EEEETTEEEEEETTSEEEEEETTSSSCE-EEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             CC--------------CceEE--EeeCCCEEEEEeCCCceeEeeeccccee-eEEecccccceeeeeecCCCCeeeeeec
Confidence            65              44544  4557889999999999999998875433 3446678899999999999999999988


Q ss_pred             CCceEEEEEEccCCC----ceeeeecCCcCeEEEEeecCCCeEEEE--eeCCCeEEEEcCCCCceeeeccccccCeEEEE
Q psy15995        206 GRERFGHVFMSETGT----SVGEISGQSKPINSCDFKPSRPFRIIT--GSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVR  279 (683)
Q Consensus       206 ~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~  279 (683)
                      ++.  +.+|+...++    .+.....|...|.+++|+|.+...+++  |+.|++|++||+.+++....+..| ..+.++.
T Consensus       251 D~~--v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~  327 (420)
T 4gga_A          251 DNL--VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSIL  327 (420)
T ss_dssp             TSC--EEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEE
T ss_pred             ccc--ceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeee
Confidence            764  6888887664    355678899999999999988876665  457999999999999988888755 5689999


Q ss_pred             ECCCCCEEEEEc--CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeE
Q psy15995        280 YSPSGSHFASAG--FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSE  353 (683)
Q Consensus       280 ~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  353 (683)
                      |+|+++.+++++  .|+.|++||+.+++.+..+..  |.+.|.+++|+|++++|++++.|++|++||+....+..+
T Consensus       328 ~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g--H~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~  401 (420)
T 4gga_A          328 WSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG--HTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARR  401 (420)
T ss_dssp             EETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC--
T ss_pred             ecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccch
Confidence            999999888764  689999999999999999875  999999999999999999999999999999987655443

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=1.7e-36  Score=293.39  Aligned_cols=298  Identities=13%  Similarity=0.086  Sum_probs=221.9

Q ss_pred             ccceEEEEECCCCcEEEEecCCC-------CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEE
Q psy15995         85 SCAVNVAKYSPSGFYIASGDISG-------KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIA  157 (683)
Q Consensus        85 ~~~v~~~~~s~d~~~las~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  157 (683)
                      .-||.+++|+|||++||+|+.+.       .|++|++..+........+...    ......+...+.++  ++++..++
T Consensus        14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~----~~~l~~~~~~v~s~--~~~~~~~~   87 (365)
T 4h5i_A           14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILS----EFALEDNDDSPTAI--DASKGIIL   87 (365)
T ss_dssp             SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEE----EEECCTTSCCCCEE--EEETTEEE
T ss_pred             CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeee----EEEccCCCCceEEE--EeCCCEEE
Confidence            45899999999999999987543       4999999876433221111100    00000011234443  33444444


Q ss_pred             -----------eecCCccEEEEeccccceeee-------ccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCC
Q psy15995        158 -----------SGDISGKVRIWDTVNKEHILK-------NEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG  219 (683)
Q Consensus       158 -----------~~~~d~~i~iwd~~~~~~~~~-------~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~  219 (683)
                                 +++.|+.+++|++........       .....+...+..++|+|||+++++++.+.+..+++|+.+++
T Consensus        88 ~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~  167 (365)
T 4h5i_A           88 VGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL  167 (365)
T ss_dssp             EECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT
T ss_pred             EEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC
Confidence                       456688899999876542211       11222345688999999999999998887788999999999


Q ss_pred             CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceee--eccccccCeEEEEECCCCCEEEEEcCCC---
Q psy15995        220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM--TKQEHSRFVQAVRYSPSGSHFASAGFDG---  294 (683)
Q Consensus       220 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg---  294 (683)
                      +.+..+. |...|.+++|+|++++ +++++.++ +.+|+..+++...  ....|...|.+++|+|+++.+++++.|+   
T Consensus       168 ~~~~~~~-~~~~V~~v~fspdg~~-l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~  244 (365)
T 4h5i_A          168 TEKFEIE-TRGEVKDLHFSTDGKV-VAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKG  244 (365)
T ss_dssp             EEEEEEE-CSSCCCEEEECTTSSE-EEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred             cEEEEeC-CCCceEEEEEccCCce-EEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence            9888876 7788999999999995 78877555 5566655655443  4457888999999999999999998887   


Q ss_pred             -cEEEEeCCCCeeE--EeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecC
Q psy15995        295 -KVFLYDGASADLV--SELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQG  371 (683)
Q Consensus       295 -~i~iw~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (683)
                       .+++|++......  .......|...|.+++|+|++++|++++.|+.|+|||+++++.+..+                 
T Consensus       245 ~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~-----------------  307 (365)
T 4h5i_A          245 IVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF-----------------  307 (365)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE-----------------
T ss_pred             eEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe-----------------
Confidence             6888988766432  12222348889999999999999999999999999999988765432                 


Q ss_pred             CEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC
Q psy15995        372 DYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG  434 (683)
Q Consensus       372 ~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~  434 (683)
                                                +.+|...|++++|+||+++|++++.|++|+|||+...
T Consensus       308 --------------------------~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          308 --------------------------KQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             --------------------------TTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred             --------------------------cCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence                                      3579999999999999999999999999999999654

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1e-37  Score=306.24  Aligned_cols=283  Identities=11%  Similarity=0.129  Sum_probs=223.4

Q ss_pred             CCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCC--cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc--
Q psy15995         44 RGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENP--AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE--  118 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~--~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~--  118 (683)
                      .+.+.+++|+|+|++|+++ .++.|++||+.++  +....+.+|...|++++|+|++++|++++.|+.|++||+.+++  
T Consensus        11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~   90 (377)
T 3dwl_C           11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTW   90 (377)
T ss_dssp             SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CC
T ss_pred             CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCce
Confidence            4578899999999999998 6899999999988  7888899999999999999999999999999999999999886  


Q ss_pred             -cccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEecccccee-eeccccc-cCCCeeEEEEcC
Q psy15995        119 -HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHI-LKNEFHP-IGGPIKDIAWSP  195 (683)
Q Consensus       119 -~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~-~~~~~~~-~~~~i~~~~~s~  195 (683)
                       ....+..+.              ..+.+++|+|++++|++++.|+.|++||+.+++.. ....+.. |...|.+++|+|
T Consensus        91 ~~~~~~~~~~--------------~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~  156 (377)
T 3dwl_C           91 KQTLVLLRLN--------------RAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP  156 (377)
T ss_dssp             CCEEECCCCS--------------SCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT
T ss_pred             eeeeEecccC--------------CceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC
Confidence             333333333              67999999999999999999999999999987631 1223334 789999999999


Q ss_pred             CCCeEEEEecCCceEEEEEEcc------------------CCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEE
Q psy15995        196 DNQRMVVVGEGRERFGHVFMSE------------------TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVF  257 (683)
Q Consensus       196 ~~~~l~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw  257 (683)
                      +++++++++.++.  +.+|+..                  .++.+..+ +|...|.+++|+|++++ |++++.|+.|++|
T Consensus       157 ~~~~l~~~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~-l~~~~~d~~i~iw  232 (377)
T 3dwl_C          157 NNVLLAAGCADRK--AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNA-LAYAGHDSSVTIA  232 (377)
T ss_dssp             TSSEEEEEESSSC--EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSC-EEEEETTTEEC-C
T ss_pred             CCCEEEEEeCCCE--EEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCE-EEEEeCCCcEEEE
Confidence            9999999987754  7888874                  24455566 89999999999999995 9999999999999


Q ss_pred             cCCCCce----eeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee--EEe----------------------
Q psy15995        258 EGPPFKF----KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL--VSE----------------------  309 (683)
Q Consensus       258 ~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~----------------------  309 (683)
                      |+.+++.    +..+..|...|.+++|+|++++|++++.++.+ +|+......  ...                      
T Consensus       233 d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (377)
T 3dwl_C          233 YPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREE  311 (377)
T ss_dssp             EECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC
T ss_pred             ECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccc
Confidence            9999887    78888999999999999999999998866555 676542110  000                      


Q ss_pred             ------------c--------------cCCccccCeEEEEEccCC-C---EEEEEECCCcEEEEEC
Q psy15995        310 ------------L--------------GNPAHKGGVYAVAWKPDG-T---QLLTASGDKTCKLWDI  345 (683)
Q Consensus       310 ------------~--------------~~~~~~~~i~~~~~~~~~-~---~l~~~~~dg~i~iwd~  345 (683)
                                  +              ....|...|.++++.+.. .   .|++++.||.|++||+
T Consensus       312 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          312 EGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             -------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             ccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence                        0              001288999999976643 3   6999999999999985

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=9.3e-37  Score=297.51  Aligned_cols=290  Identities=17%  Similarity=0.211  Sum_probs=235.4

Q ss_pred             cccCCCeEEEeeCCCCCeEEEec-----CCeEEEEeCCCCcccccc-cCcccceEEEEECCC---CcEEEEecCCCCEEE
Q psy15995         41 RTQRGQPIVLGGDPKGKNFLYTN-----GNSVIIRNIENPAISDIY-TEHSCAVNVAKYSPS---GFYIASGDISGKVRI  111 (683)
Q Consensus        41 ~~~~~~~~~~~~s~~~~~l~~~~-----~~~i~v~~~~~~~~~~~~-~~h~~~v~~~~~s~d---~~~las~~~dg~i~i  111 (683)
                      ..+.+.+.+++|+|+++.++++.     ++.|.+||+++++..... .+|...|.+++|+|+   |++|++++.||.|++
T Consensus        15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i   94 (357)
T 3i2n_A           15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHI   94 (357)
T ss_dssp             EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEE
T ss_pred             cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEE
Confidence            44677999999999997665443     789999999998765443 379999999999998   799999999999999


Q ss_pred             EeCCCcc-cccccccccCCCCcccceeeeeecceeee------EeeccceEEEeecCCccEEEEeccccc-eeeeccccc
Q psy15995        112 WDTVNKE-HILKNEFHPIGGPIKDIGTLLSLTSIRNI------LVLSIGFYIASGDISGKVRIWDTVNKE-HILKNEFHP  183 (683)
Q Consensus       112 wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~------~~s~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~  183 (683)
                      ||+.+++ .+..+..|.              ..+.++      +|+|++++|++++.||.|++||+.+++ .+.......
T Consensus        95 wd~~~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~  160 (357)
T 3i2n_A           95 WNLEAPEMPVYSVKGHK--------------EIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ  160 (357)
T ss_dssp             ECTTSCSSCSEEECCCS--------------SCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT
T ss_pred             EeCCCCCccEEEEEecc--------------cceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC
Confidence            9999887 666665554              556666      568899999999999999999999876 333322211


Q ss_pred             --cCCCeeEEE----EcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeec---CCCeEEEEeeCCCeE
Q psy15995        184 --IGGPIKDIA----WSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKP---SRPFRIITGSEDNTI  254 (683)
Q Consensus       184 --~~~~i~~~~----~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~d~~i  254 (683)
                        ....+.+++    |+|+++++++++.++.  +.+|+.++++.. ....|...|.+++|+|   ++.. +++++.||.|
T Consensus       161 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~--i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~-l~~~~~dg~i  236 (357)
T 3i2n_A          161 GENKRDCWTVAFGNAYNQEERVVCAGYDNGD--IKLFDLRNMALR-WETNIKNGVCSLEFDRKDISMNK-LVATSLEGKF  236 (357)
T ss_dssp             TSCCCCEEEEEEECCCC-CCCEEEEEETTSE--EEEEETTTTEEE-EEEECSSCEEEEEESCSSSSCCE-EEEEESTTEE
T ss_pred             CCCCCceEEEEEEeccCCCCCEEEEEccCCe--EEEEECccCcee-eecCCCCceEEEEcCCCCCCCCE-EEEECCCCeE
Confidence              134788888    7899999999887654  788998887764 4477899999999999   7775 9999999999


Q ss_pred             EEEcCCCCceeeecc-----ccccCeEEEEECCCCC-EEEEEcCCCcEEEEeCCCC-------------------eeEEe
Q psy15995        255 AVFEGPPFKFKMTKQ-----EHSRFVQAVRYSPSGS-HFASAGFDGKVFLYDGASA-------------------DLVSE  309 (683)
Q Consensus       255 ~iw~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~-------------------~~~~~  309 (683)
                      ++||+++++....+.     +|...|.+++|+|+++ +|++++.||.|++||++.+                   +.+..
T Consensus       237 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~  316 (357)
T 3i2n_A          237 HVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQN  316 (357)
T ss_dssp             EEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEE
T ss_pred             EEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeec
Confidence            999988776655554     8999999999999998 8999999999999998754                   24445


Q ss_pred             ccCCccccCeEEEEEccCCCEEE-EEECCCcEEEEECCCCce
Q psy15995        310 LGNPAHKGGVYAVAWKPDGTQLL-TASGDKTCKLWDIETKSV  350 (683)
Q Consensus       310 ~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~  350 (683)
                      +..  |...|.+++|+|++++|+ +++.||.|++||+.+.+.
T Consensus       317 ~~~--~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~  356 (357)
T 3i2n_A          317 VTL--STQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK  356 (357)
T ss_dssp             EEC--CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred             ccc--CCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence            543  899999999999999998 799999999999987643

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-37  Score=301.10  Aligned_cols=314  Identities=13%  Similarity=0.061  Sum_probs=248.3

Q ss_pred             cCCCeEEEeeCCCCCeEEEec-CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccc
Q psy15995         43 QRGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHIL  121 (683)
Q Consensus        43 ~~~~~~~~~~s~~~~~l~~~~-~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~  121 (683)
                      ...-+.+++|||||+++|+++ |++|+  |.+.+   ..+++|...|.+++|+|+|       .++.+.+|+.+... +.
T Consensus        14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~-~~   80 (588)
T 2j04_A           14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQNG-LL   80 (588)
T ss_dssp             CSSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSC-SS
T ss_pred             hhccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCCCce-Ee
Confidence            346778899999999999984 67787  65544   4457999999999999999       56666666644332 22


Q ss_pred             ccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCC-----CeeEEEEcCC
Q psy15995        122 KNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGG-----PIKDIAWSPD  196 (683)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-----~i~~~~~s~~  196 (683)
                      .+.. .              ..|.+++|||||++||+++.||.|++||.+.  .+..  +. |..     .+.+++||||
T Consensus        81 ~~~~-~--------------~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~--l~-~~~~~~~~sv~svafSPD  140 (588)
T 2j04_A           81 NSQP-V--------------CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTN--LD-SKGNLSSRTYHCFEWNPI  140 (588)
T ss_dssp             TTSC-S--------------CCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEE--CC-CSSCSTTTCEEEEEECSS
T ss_pred             ecCC-C--------------CcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeee--cc-CCCccccccEEEEEEcCC
Confidence            2111 1              6799999999999999999999999999654  2222  22 333     5999999999


Q ss_pred             CCeEEEEecCCceEEEEEEccCCCc-------eeee----ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee
Q psy15995        197 NQRMVVVGEGRERFGHVFMSETGTS-------VGEI----SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK  265 (683)
Q Consensus       197 ~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  265 (683)
                      |++|++++.++.  +.+|+.+.+..       +..+    .+|...|.+++|+|++   +++++.|+++++|++...+..
T Consensus       141 G~~LAsgs~DGt--VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~  215 (588)
T 2j04_A          141 ESSIVVGNEDGE--LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQ  215 (588)
T ss_dssp             SSCEEEEETTSE--EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSC
T ss_pred             CCEEEEEcCCCE--EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccc
Confidence            999999998765  78999888753       4565    6778899999999998   788899999999999887742


Q ss_pred             ---eec-cccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEE--ccCCCEEEEEECCCc
Q psy15995        266 ---MTK-QEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW--KPDGTQLLTASGDKT  339 (683)
Q Consensus       266 ---~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~  339 (683)
                         ..+ .+|...|.+++|+  |+.||+++ +++|++||+.+++.......  |...+..++|  +|++..+++++++|+
T Consensus       216 ~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~g--h~~~V~~va~~~s~d~~~La~a~edG~  290 (588)
T 2j04_A          216 PVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTG--SLENFHIIPLNHEKESTILLMSNKTSY  290 (588)
T ss_dssp             CCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECS--CCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred             cceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcC--CCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence               345 4788999999999  68899988 69999999998887443323  9999999999  999999999999999


Q ss_pred             EEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEE
Q psy15995        340 CKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFT  419 (683)
Q Consensus       340 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  419 (683)
                       ++|....                 +.+.|++..++..  ++.+++|+.....  ...+.+ ...|.+++++|||+.+|+
T Consensus       291 -klw~~d~-----------------~~~spd~~l~a~~--d~~v~lW~~~g~~--l~~~~~-~~~I~~va~SPdG~~lA~  347 (588)
T 2j04_A          291 -KVLLEDE-----------------LHVTADNIIAPYL--EKKFKKWSTIWNE--FNNYET-TLVIHGISLSPDGYSIAI  347 (588)
T ss_dssp             -EEEESSS-----------------EEEECCCSSHHHH--HHHHHHTTTTTTS--SSSSCC-EEEEEEEEECTTSSEEEE
T ss_pred             -EEEeecc-----------------EEECCCceEEEEc--CCEEEEEECCCCc--eeeecc-ceEEEEEEECCCCCEEEE
Confidence             9999871                 3456666666553  8999999875432  334444 677999999999999998


Q ss_pred             EeC
Q psy15995        420 GSH  422 (683)
Q Consensus       420 ~~~  422 (683)
                      ++.
T Consensus       348 ~~~  350 (588)
T 2j04_A          348 VYD  350 (588)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            864

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=9.3e-35  Score=288.52  Aligned_cols=291  Identities=21%  Similarity=0.353  Sum_probs=238.6

Q ss_pred             CeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeE
Q psy15995        274 FVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSE  353 (683)
Q Consensus       274 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  353 (683)
                      .++.++|+++ +.|++|. |++|++||..+++....+....|...|++++|+|++++|++|+.||.|++||+++++.+..
T Consensus       107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~  184 (420)
T 4gga_A          107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN  184 (420)
T ss_dssp             TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence            4677999976 4777765 9999999999999988877666888999999999999999999999999999999988776


Q ss_pred             EEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCC
Q psy15995        354 FIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~  433 (683)
                      +...   .....++.+++..+++++.++.+.+||.......+..+.+|...+..+.++|+++++++++.|+.+++|+..+
T Consensus       185 ~~~h---~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~  261 (420)
T 4gga_A          185 MTSH---SARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP  261 (420)
T ss_dssp             ECCC---SSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred             EeCC---CCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence            6432   2344556778999999999999999999988888888999999999999999999999999999999999987


Q ss_pred             CCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCc
Q psy15995        434 GENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGA  513 (683)
Q Consensus       434 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (683)
                      ++.......                                                                       
T Consensus       262 ~~~~~~~~~-----------------------------------------------------------------------  270 (420)
T 4gga_A          262 GEGGWVPLQ-----------------------------------------------------------------------  270 (420)
T ss_dssp             CSSCSCCSE-----------------------------------------------------------------------
T ss_pred             ccccceeee-----------------------------------------------------------------------
Confidence            654221100                                                                       


Q ss_pred             eeeeecCCCCCcEEEEccCCC-EEEE--EcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEe--CCCeE
Q psy15995        514 KVSSLPIDYEPSSISLDHEHG-LVAV--GGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASD--AHRKV  588 (683)
Q Consensus       514 ~~~~~~~~~~~~~~~~~~~~~-~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~d~~i  588 (683)
                        ....+...+.+++++|++. ++++  |+.|+.|++||+.++......  .+...+.++.|+|+++.+++++  .|+.|
T Consensus       271 --~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~--~~~~~v~~~~~~~~~~~lv~~sg~~d~~I  346 (420)
T 4gga_A          271 --TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV--DAHSQVCSILWSPHYKELISGHGFAQNQL  346 (420)
T ss_dssp             --EECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEE--ECSSCEEEEEEETTTTEEEEEECTTTCCE
T ss_pred             --eecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceee--ccccceeeeeecCCCCeEEEEEecCCCEE
Confidence              0011233567778888654 4444  457999999999998876443  3567899999999999998765  78999


Q ss_pred             EEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEe
Q psy15995        589 VLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIII  646 (683)
Q Consensus       589 ~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~  646 (683)
                      +|||+.+++.+..  +.+|.+.|++++|+|||++||||+.|++|++||+.+..+....
T Consensus       347 ~iwd~~~~~~v~~--l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~  402 (420)
T 4gga_A          347 VIWKYPTMAKVAE--LKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRR  402 (420)
T ss_dssp             EEEETTTCCEEEE--ECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC---
T ss_pred             EEEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchh
Confidence            9999999988754  4459999999999999999999999999999999876655444

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=1.7e-34  Score=276.33  Aligned_cols=285  Identities=21%  Similarity=0.353  Sum_probs=235.7

Q ss_pred             eEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEE
Q psy15995        275 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEF  354 (683)
Q Consensus       275 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  354 (683)
                      .++|+||+++ .|++|. |++|++||+.+++.+..+....|...|.+++|+|++++|++|+.||.|++||+++++.+..+
T Consensus        28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~  105 (318)
T 4ggc_A           28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM  105 (318)
T ss_dssp             CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence            5679999986 677665 99999999999999988876668899999999999999999999999999999999988776


Q ss_pred             EecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC
Q psy15995        355 IMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG  434 (683)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~  434 (683)
                      ....   .....+.+++..+++++.++.+.+|+..........+.+|...+..+.++++++++++++.|+.|++||+.++
T Consensus       106 ~~h~---~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~  182 (318)
T 4ggc_A          106 TSHS---ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG  182 (318)
T ss_dssp             ECCS---SCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred             cCcc---ceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCC
Confidence            5432   3345667789999999999999999999888888889999999999999999999999999999999999876


Q ss_pred             CcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCce
Q psy15995        435 ENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAK  514 (683)
Q Consensus       435 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (683)
                      +.......                                                                        
T Consensus       183 ~~~~~~~~------------------------------------------------------------------------  190 (318)
T 4ggc_A          183 EGGWVPLQ------------------------------------------------------------------------  190 (318)
T ss_dssp             TTBSCCSE------------------------------------------------------------------------
T ss_pred             ccccccee------------------------------------------------------------------------
Confidence            54322210                                                                        


Q ss_pred             eeeecCCCCCcEEEEccCCCE---EEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEe--CCCeEE
Q psy15995        515 VSSLPIDYEPSSISLDHEHGL---VAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASD--AHRKVV  589 (683)
Q Consensus       515 ~~~~~~~~~~~~~~~~~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~d~~i~  589 (683)
                       ........+..++++|++..   +++++.++.|++||........  ...+...+..+.|+|+++.+++++  .|+.|+
T Consensus       191 -~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~  267 (318)
T 4ggc_A          191 -TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS--AVDAHSQVCSILWSPHYKELISGHGFAQNQLV  267 (318)
T ss_dssp             -EECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEE--EEECSSCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred             -eecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccc--cccceeeeeeeeecccccceEEEEEcCCCEEE
Confidence             00011223456666666543   3466788999999998876653  334778899999999999887754  799999


Q ss_pred             EEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCc
Q psy15995        590 LYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPA  641 (683)
Q Consensus       590 i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~  641 (683)
                      +||+.+++.+..  +.+|.+.|++++|+||+++||+|+.||+|+|||+.+..
T Consensus       268 iwd~~~~~~~~~--l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d  317 (318)
T 4ggc_A          268 IWKYPTMAKVAE--LKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD  317 (318)
T ss_dssp             EEETTTCCEEEE--ECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred             EEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence            999999988754  44599999999999999999999999999999997654

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=1.4e-34  Score=277.03  Aligned_cols=279  Identities=17%  Similarity=0.273  Sum_probs=237.2

Q ss_pred             EEEeeCCCCCeEEEecCCeEEEEeCCCCccccccc--CcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccc
Q psy15995         48 IVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYT--EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        48 ~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~--~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      .+++||+++ +||++.|+.|+|||+++++.++.++  +|...|++++|+|++++||+|+.||+|++||+.+++.+..+..
T Consensus        29 ~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~  107 (318)
T 4ggc_A           29 NLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS  107 (318)
T ss_dssp             BCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred             eEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecC
Confidence            468999987 8999999999999999999877654  6888999999999999999999999999999999998887766


Q ss_pred             ccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEec
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE  205 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  205 (683)
                      |.              ..  ...+++++..+++++.++.+++|+....... ...+..|...+..+.++++++++++++.
T Consensus       108 h~--------------~~--~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~  170 (318)
T 4ggc_A          108 HS--------------AR--VGSLSWNSYILSSGSRSGHIHHHDVRVAEHH-VATLSGHSQEVCGLRWAPDGRHLASGGN  170 (318)
T ss_dssp             CS--------------SC--EEEEEEETTEEEEEETTSEEEEEETTSSSCE-EEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             cc--------------ce--EEEeecCCCEEEEEecCCceEeeecCCCcee-EEEEcCccCceEEEEEcCCCCEEEEEec
Confidence            64              22  3356778889999999999999999876543 3445677899999999999999999887


Q ss_pred             CCceEEEEEEccCCCc----eeeeecCCcCeEEEEeecCCCeEE--EEeeCCCeEEEEcCCCCceeeeccccccCeEEEE
Q psy15995        206 GRERFGHVFMSETGTS----VGEISGQSKPINSCDFKPSRPFRI--ITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVR  279 (683)
Q Consensus       206 ~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l--~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~  279 (683)
                      ++.  +.+|+..+++.    ......+...|.++.++|.+...+  ++++.+++|++||.......... .+...+..+.
T Consensus       171 d~~--i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~  247 (318)
T 4ggc_A          171 DNL--VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSIL  247 (318)
T ss_dssp             TSC--EEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEE
T ss_pred             Ccc--eeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeee
Confidence            754  78899887653    345667888999999999887544  46678999999998887766554 4667899999


Q ss_pred             ECCCCCEEEEEc--CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCc
Q psy15995        280 YSPSGSHFASAG--FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       280 ~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      |+|+++.+++++  .|+.|++||+++++.+..+..  |.+.|.+++|+|++++|++++.||+|++||+.+..
T Consensus       248 ~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g--H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d  317 (318)
T 4ggc_A          248 WSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG--HTSRVLSLTMSPDGATVASAAADETLRLWRCFELD  317 (318)
T ss_dssp             EETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred             ecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence            999999877654  799999999999999999875  99999999999999999999999999999987643

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=7.7e-35  Score=273.99  Aligned_cols=245  Identities=18%  Similarity=0.233  Sum_probs=204.6

Q ss_pred             ccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCC--CcccccccCcccceEEEEECCC--CcEEEEecCCCCEEEEeCCC
Q psy15995         42 TQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIEN--PAISDIYTEHSCAVNVAKYSPS--GFYIASGDISGKVRIWDTVN  116 (683)
Q Consensus        42 ~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~--~~~~~~~~~h~~~v~~~~~s~d--~~~las~~~dg~i~iwd~~~  116 (683)
                      .+.+.+.+++|+|+|++||++ .++.|+|||+++  .+.+..+.+|.++|.+++|+++  +++||+|+.|++|+|||+.+
T Consensus         7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~   86 (297)
T 2pm7_B            7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN   86 (297)
T ss_dssp             SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS
T ss_pred             CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC
Confidence            466789999999999999988 589999999975  4677889999999999999874  89999999999999999987


Q ss_pred             cc--cccccccccCCCCcccceeeeeecceeeeEeecc--ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEE
Q psy15995        117 KE--HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI--GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIA  192 (683)
Q Consensus       117 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~  192 (683)
                      ++  .+..+..|.              ..|.+++|+|+  +.+|++++.|+.|++||+.++.......+..|...|.+++
T Consensus        87 ~~~~~~~~~~~h~--------------~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~  152 (297)
T 2pm7_B           87 GRWSQIAVHAVHS--------------ASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSAS  152 (297)
T ss_dssp             SCBCCCEEECCCS--------------SCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEE
T ss_pred             CceEEEEEeecCC--------------CceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEe
Confidence            64  233333332              67999999998  8899999999999999998764333345667889999999


Q ss_pred             EcCC-------------CCeEEEEecCCceEEEEEEccCCC----ceeeeecCCcCeEEEEeecCC--CeEEEEeeCCCe
Q psy15995        193 WSPD-------------NQRMVVVGEGRERFGHVFMSETGT----SVGEISGQSKPINSCDFKPSR--PFRIITGSEDNT  253 (683)
Q Consensus       193 ~s~~-------------~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~d~~  253 (683)
                      |+|+             +++|++++.++.  +++|+.+.++    ....+.+|...|.+++|+|++  ..+|++++.|++
T Consensus       153 ~~p~~~~~~~~~~~~~~~~~l~sgs~D~~--v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~  230 (297)
T 2pm7_B          153 WAPATIEEDGEHNGTKESRKFVTGGADNL--VKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT  230 (297)
T ss_dssp             ECCCC------------CCEEEEEETTSC--EEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred             ecCCcccccccCCCCCCcceEEEEcCCCc--EEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc
Confidence            9997             468888887754  7889988766    566788999999999999985  346999999999


Q ss_pred             EEEEcCCCCc---eeeec--cccccCeEEEEECCCCCEEEEEcCCCcEEEEeCC
Q psy15995        254 IAVFEGPPFK---FKMTK--QEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGA  302 (683)
Q Consensus       254 i~iw~~~~~~---~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  302 (683)
                      |++||.+...   ....+  ..|...|.+++|+|++++|++++.||.|++|+..
T Consensus       231 v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~  284 (297)
T 2pm7_B          231 CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN  284 (297)
T ss_dssp             EEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred             EEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence            9999987643   12223  5688899999999999999999999999999976

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=1.3e-35  Score=281.84  Aligned_cols=251  Identities=21%  Similarity=0.288  Sum_probs=204.0

Q ss_pred             ccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc--cccccccccCCCCcccceeeeeecceeeeEeec--cce
Q psy15995         79 DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE--HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS--IGF  154 (683)
Q Consensus        79 ~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~  154 (683)
                      ..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.+++  .+..+..|.              ..|.+++|++  +++
T Consensus         7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~--------------~~V~~v~~~~~~~~~   72 (316)
T 3bg1_A            7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHE--------------GPVWQVAWAHPMYGN   72 (316)
T ss_dssp             -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCS--------------SCEEEEEECCGGGSS
T ss_pred             eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCC--------------ccEEEEEeCCCCCCC
Confidence            3467999999999999999999999999999999998764  334444454              7899999986  489


Q ss_pred             EEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCC--CCeEEEEecCCceEEEEEEccCCCc---eeeeecCC
Q psy15995        155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPD--NQRMVVVGEGRERFGHVFMSETGTS---VGEISGQS  229 (683)
Q Consensus       155 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  229 (683)
                      +|++++.|++|++||+.+++......+..|...|.+++|+|+  +.++++++.++.  +.+|+...+..   ...+.+|.
T Consensus        73 ~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~--i~lwd~~~~~~~~~~~~~~~h~  150 (316)
T 3bg1_A           73 ILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA--ISLLTYTGEGQWEVKKINNAHT  150 (316)
T ss_dssp             CEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC--EEEEEECSSSCEEECCBTTSSS
T ss_pred             EEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC--EEEEecCCCCCcceeeeecccc
Confidence            999999999999999998754444556778899999999998  778888877654  78888876532   45567899


Q ss_pred             cCeEEEEeecCC-----------------CeEEEEeeCCCeEEEEcCCCC---ceeeeccccccCeEEEEECCCC----C
Q psy15995        230 KPINSCDFKPSR-----------------PFRIITGSEDNTIAVFEGPPF---KFKMTKQEHSRFVQAVRYSPSG----S  285 (683)
Q Consensus       230 ~~v~~~~~~~~~-----------------~~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~----~  285 (683)
                      ..|.+++|+|+.                 . .|++++.|++|++||.+..   +....+.+|...|.+++|+|++    +
T Consensus       151 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~  229 (316)
T 3bg1_A          151 IGCNAVSWAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS  229 (316)
T ss_dssp             SCBCCCEECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCC
T ss_pred             CCcceEEEccccCCccccccccccCccccc-eEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCc
Confidence            999999999973                 3 5999999999999998754   4667788999999999999986    7


Q ss_pred             EEEEEcCCCcEEEEeCCCC---e-eEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCC
Q psy15995        286 HFASAGFDGKVFLYDGASA---D-LVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETK  348 (683)
Q Consensus       286 ~l~~~~~dg~i~iw~~~~~---~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  348 (683)
                      +|++++.|++|++|++.+.   + ....+.  .|...|.+++|+|++++|++++.|+.|++|+....
T Consensus       230 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~  294 (316)
T 3bg1_A          230 TIASCSQDGRVFIWTCDDASSNTWSPKLLH--KFNDVVWHVSWSITANILAVSGGDNKVTLWKESVD  294 (316)
T ss_dssp             EEEEEETTCEEEEEECSSTTCCCCBCCEEE--ECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTT
T ss_pred             eEEEEcCCCeEEEEEccCccccchhhhhhh--cCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCC
Confidence            9999999999999998763   1 112222  27889999999999999999999999999997643

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-34  Score=284.87  Aligned_cols=262  Identities=19%  Similarity=0.273  Sum_probs=219.5

Q ss_pred             CcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCC--CcccccccccccCCCCcccceeeeeecceeeeEeecc
Q psy15995         75 PAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTV--NKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI  152 (683)
Q Consensus        75 ~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  152 (683)
                      |+++..+.+|.+.|++++|+|++++||+++.||.|+|||+.  +++.+..+..|.              ..|.+++|+++
T Consensus         1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~~   66 (379)
T 3jrp_A            1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHE--------------GPVWRVDWAHP   66 (379)
T ss_dssp             ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCS--------------SCEEEEEECCG
T ss_pred             CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCC--------------CcEEEEEeCCC
Confidence            35667889999999999999999999999999999999998  455555555554              78999999987


Q ss_pred             --ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCC--CCeEEEEecCCceEEEEEEccCCC--ceeeee
Q psy15995        153 --GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPD--NQRMVVVGEGRERFGHVFMSETGT--SVGEIS  226 (683)
Q Consensus       153 --~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~  226 (683)
                        +++|++++.||.|++||+.+++......+..|...|.+++|+|+  ++++++++.++.  +.+|+...+.  ....+.
T Consensus        67 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~--i~v~d~~~~~~~~~~~~~  144 (379)
T 3jrp_A           67 KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK--VSVVEFKENGTTSPIIID  144 (379)
T ss_dssp             GGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE--EEEEECCTTSCCCEEEEE
T ss_pred             CCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCc--EEEEecCCCCceeeEEec
Confidence              89999999999999999999875555666678899999999999  899999887754  7888888763  445678


Q ss_pred             cCCcCeEEEEeec-------------CCCeEEEEeeCCCeEEEEcCCCCc----eeeeccccccCeEEEEECCC---CCE
Q psy15995        227 GQSKPINSCDFKP-------------SRPFRIITGSEDNTIAVFEGPPFK----FKMTKQEHSRFVQAVRYSPS---GSH  286 (683)
Q Consensus       227 ~~~~~v~~~~~~~-------------~~~~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~~~~v~~~~~~~~---~~~  286 (683)
                      .|...|.+++|+|             ++. .+++++.|+.|++||+++.+    ....+.+|...|.+++|+|+   +++
T Consensus       145 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~  223 (379)
T 3jrp_A          145 AHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY  223 (379)
T ss_dssp             CCTTCEEEEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred             CCCCceEEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCe
Confidence            8999999999999             466 59999999999999987654    44677789999999999999   899


Q ss_pred             EEEEcCCCcEEEEeCCCCe---eEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeE
Q psy15995        287 FASAGFDGKVFLYDGASAD---LVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSE  353 (683)
Q Consensus       287 l~~~~~dg~i~iw~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  353 (683)
                      |++++.||.|++||+.++.   .........|...|.+++|+|++++|++++.||.|++|++........
T Consensus       224 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~  293 (379)
T 3jrp_A          224 LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEP  293 (379)
T ss_dssp             EEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEE
T ss_pred             EEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccc
Confidence            9999999999999998864   333333344888999999999999999999999999999986554433

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=2.4e-34  Score=289.61  Aligned_cols=299  Identities=11%  Similarity=0.155  Sum_probs=232.6

Q ss_pred             ccCCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCc-----------ccccccCcc------------cceEEEEECCCC
Q psy15995         42 TQRGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPA-----------ISDIYTEHS------------CAVNVAKYSPSG   97 (683)
Q Consensus        42 ~~~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~-----------~~~~~~~h~------------~~v~~~~~s~d~   97 (683)
                      .+.+.+.+++|||+|++||++ .++.|+|||+.+++           ....+.+|.            +.|++++|+|++
T Consensus        26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~  105 (447)
T 3dw8_B           26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK  105 (447)
T ss_dssp             CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred             cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence            346789999999999999998 58999999999877           467788998            889999999998


Q ss_pred             --cEEEEecCCCCEEEEeCCCcccccc-cccccCCC------Cccc-------------------ceeeeeecceeeeEe
Q psy15995         98 --FYIASGDISGKVRIWDTVNKEHILK-NEFHPIGG------PIKD-------------------IGTLLSLTSIRNILV  149 (683)
Q Consensus        98 --~~las~~~dg~i~iwd~~~~~~~~~-~~~~~~~~------~~~~-------------------~~~~~~~~~i~~~~~  149 (683)
                        .+|++++.|+.|++||+.++..... +......+      .+..                   .....+...|.+++|
T Consensus       106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  185 (447)
T 3dw8_B          106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI  185 (447)
T ss_dssp             SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred             CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence              8999999999999999987543211 00000000      0000                   001124477999999


Q ss_pred             eccceEEEeecCCccEEEEeccccceeee-c-----cccccCCCeeEEEEcCCC-CeEEEEecCCceEEEEEEccCCCc-
Q psy15995        150 LSIGFYIASGDISGKVRIWDTVNKEHILK-N-----EFHPIGGPIKDIAWSPDN-QRMVVVGEGRERFGHVFMSETGTS-  221 (683)
Q Consensus       150 s~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~-----~~~~~~~~i~~~~~s~~~-~~l~~~~~~~~~~~~~~~~~~~~~-  221 (683)
                      +|++++|+++ .|+.|++||+.+...... .     .+..|...|.+++|+|++ +++++++.++.  +.+|+..+++. 
T Consensus       186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~--i~iwd~~~~~~~  262 (447)
T 3dw8_B          186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT--IRLCDMRASALC  262 (447)
T ss_dssp             CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC--EEEEETTTCSSS
T ss_pred             cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe--EEEEECcCCccc
Confidence            9999999999 799999999995433222 1     466788999999999998 88888887754  78999998876 


Q ss_pred             ---eeeeecCCc------------CeEEEEeecCCCeEEEEeeCCCeEEEEcCCC-CceeeeccccccC-----------
Q psy15995        222 ---VGEISGQSK------------PINSCDFKPSRPFRIITGSEDNTIAVFEGPP-FKFKMTKQEHSRF-----------  274 (683)
Q Consensus       222 ---~~~~~~~~~------------~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~-----------  274 (683)
                         ...+..|..            .|.+++|+|++++ |++++. +.|++||++. ++.+..+..|...           
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~  340 (447)
T 3dw8_B          263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY-MMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEND  340 (447)
T ss_dssp             CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSE-EEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTS
T ss_pred             cceeeEeccCCCccccccccccCceEEEEEECCCCCE-EEEeeC-CeEEEEeCCCCccccceeecccccccccccccccc
Confidence               778888876            9999999999996 888888 9999999987 8888888877642           


Q ss_pred             ----eEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccC------------------------------CccccCeE
Q psy15995        275 ----VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN------------------------------PAHKGGVY  320 (683)
Q Consensus       275 ----v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~------------------------------~~~~~~i~  320 (683)
                          +..++|+|++++|++++.||.|++||+.+++.+.....                              ......|.
T Consensus       341 ~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  420 (447)
T 3dw8_B          341 CIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKIL  420 (447)
T ss_dssp             GGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCC
T ss_pred             ccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCcee
Confidence                23499999999999999999999999998877542110                              01346789


Q ss_pred             EEEEccCCCEEEEEECCCcEEEEECC
Q psy15995        321 AVAWKPDGTQLLTASGDKTCKLWDIE  346 (683)
Q Consensus       321 ~~~~~~~~~~l~~~~~dg~i~iwd~~  346 (683)
                      .++|+|+++.|++++.++ +.+|..+
T Consensus       421 ~~~~~p~~~~la~~~~~~-~~~~~~~  445 (447)
T 3dw8_B          421 HTAWHPKENIIAVATTNN-LYIFQDK  445 (447)
T ss_dssp             EEEECSSSSEEEEECSSC-EEEEECC
T ss_pred             EEEECCCCCEEEEEecce-eeeeccc
Confidence            999999999999988765 8888654

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=4.5e-34  Score=279.88  Aligned_cols=298  Identities=16%  Similarity=0.251  Sum_probs=240.5

Q ss_pred             EcCCCCceeeeccccccCeEEEEECCC---CCEEEEEcCCCcEEEEeCCC-CeeE-EeccCCccccCeEEEEEccCCCEE
Q psy15995        257 FEGPPFKFKMTKQEHSRFVQAVRYSPS---GSHFASAGFDGKVFLYDGAS-ADLV-SELGNPAHKGGVYAVAWKPDGTQL  331 (683)
Q Consensus       257 w~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iw~~~~-~~~~-~~~~~~~~~~~i~~~~~~~~~~~l  331 (683)
                      ++....+....+.+|...|.+++|+|+   |++|++++.||.|++||+.+ +..+ ..+.  .|...|.+++|+|++++|
T Consensus        24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l  101 (368)
T 3mmy_A           24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ--MHTGPVLDVCWSDDGSKV  101 (368)
T ss_dssp             CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEE--ECSSCEEEEEECTTSSEE
T ss_pred             CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEec--cccCCEEEEEECcCCCEE
Confidence            456677778888999999999999999   59999999999999999987 5444 4554  399999999999999999


Q ss_pred             EEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEE-
Q psy15995        332 LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALAL-  410 (683)
Q Consensus       332 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-  410 (683)
                      ++++.||.|++||+++++...                                             +..|...|.+++| 
T Consensus       102 ~s~~~dg~v~iwd~~~~~~~~---------------------------------------------~~~~~~~v~~~~~~  136 (368)
T 3mmy_A          102 FTASCDKTAKMWDLSSNQAIQ---------------------------------------------IAQHDAPVKTIHWI  136 (368)
T ss_dssp             EEEETTSEEEEEETTTTEEEE---------------------------------------------EEECSSCEEEEEEE
T ss_pred             EEEcCCCcEEEEEcCCCCcee---------------------------------------------eccccCceEEEEEE
Confidence            999999999999999876432                                             2358899999999 


Q ss_pred             -eCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCc
Q psy15995        411 -SPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPR  489 (683)
Q Consensus       411 -~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~  489 (683)
                       +|+++++++++.||.|++||+++++......  ....+.++.+....+++++.++.+++|++........         
T Consensus       137 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------  205 (368)
T 3mmy_A          137 KAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ--LPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFR---------  205 (368)
T ss_dssp             ECSSCEEEEEEETTSEEEEECSSCSSCSEEEE--CSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEE---------
T ss_pred             eCCCCCEEEEccCCCcEEEEECCCCcEEEEEe--cCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhh---------
Confidence             8999999999999999999999988777664  3347778888899999999999999999986532110         


Q ss_pred             eeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCE----EEEEcCCCcEEEEEcCCCcc-Cc-ceeecC
Q psy15995        490 GLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGL----VAVGGADSKVHIYELNNKSL-SP-KAELDH  563 (683)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~dg~i~i~d~~~~~~-~~-~~~~~~  563 (683)
                                               ....+......++++.++...    +++++.||.|++|++..... .. .....|
T Consensus       206 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~  260 (368)
T 3mmy_A          206 -------------------------RIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCH  260 (368)
T ss_dssp             -------------------------ECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECS
T ss_pred             -------------------------hccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeee
Confidence                                     011112334456666665544    99999999999999988743 11 112234


Q ss_pred             Cc------------CeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCc
Q psy15995        564 LG------------PVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTT  631 (683)
Q Consensus       564 ~~------------~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~  631 (683)
                      ..            +|++++|+|++++|++++.||.|++||+.+++.+....  +|...|++++|+||+++|++++.|+.
T Consensus       261 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~g~~l~~~s~d~~  338 (368)
T 3mmy_A          261 RSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE--QLDQPISACCFNHNGNIFAYASSYDW  338 (368)
T ss_dssp             EEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC--CCSSCEEEEEECTTSSCEEEEECCCS
T ss_pred             ecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec--CCCCCceEEEECCCCCeEEEEecccc
Confidence            43            79999999999999999999999999999988875544  38999999999999999999999986


Q ss_pred             EEEEeCCC
Q psy15995        632 IIIWSLAS  639 (683)
Q Consensus       632 v~iw~~~~  639 (683)
                      .+.|++.+
T Consensus       339 ~~~~~~~~  346 (368)
T 3mmy_A          339 SKGHEFYN  346 (368)
T ss_dssp             TTCGGGCC
T ss_pred             cccccccC
Confidence            66665543

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=1.1e-34  Score=275.51  Aligned_cols=270  Identities=19%  Similarity=0.287  Sum_probs=200.8

Q ss_pred             eccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee--EEeccCCccccCeEEEEEcc--CCCEEEEEECCCcEEE
Q psy15995        267 TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL--VSELGNPAHKGGVYAVAWKP--DGTQLLTASGDKTCKL  342 (683)
Q Consensus       267 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~i  342 (683)
                      .+.+|...|.+++|+|+|++|++++.|++|++||+.++..  +..+.  +|...|.+++|++  ++++|++++.|++|++
T Consensus         8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~--gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i   85 (316)
T 3bg1_A            8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLR--GHEGPVWQVAWAHPMYGNILASCSYDRKVII   85 (316)
T ss_dssp             ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEE--CCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred             ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEc--CCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence            4568999999999999999999999999999999988753  45554  4999999999986  4899999999999999


Q ss_pred             EECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCC--CCEEEEE
Q psy15995        343 WDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPD--RGTVFTG  420 (683)
Q Consensus       343 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~  420 (683)
                      ||+++++..                                          ....+.+|...|.+++|+|+  +.+|+++
T Consensus        86 Wd~~~~~~~------------------------------------------~~~~~~~h~~~V~~v~~~p~~~g~~lasg  123 (316)
T 3bg1_A           86 WREENGTWE------------------------------------------KSHEHAGHDSSVNSVCWAPHDYGLILACG  123 (316)
T ss_dssp             ECCSSSCCC------------------------------------------EEEEECCCSSCCCEEEECCTTTCSCEEEE
T ss_pred             EECCCCcce------------------------------------------EEEEccCCCCceEEEEECCCCCCcEEEEE
Confidence            999875321                                          11234678999999999998  7899999


Q ss_pred             eCCCcEEEEcCCCCCcc--eeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeE
Q psy15995        421 SHDGFITRWNAKTGEND--RVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTL  498 (683)
Q Consensus       421 ~~dg~i~~w~~~~~~~~--~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (683)
                      +.|+.|++||+..+...  ......|...+.++.+..+...     +.+  .+....                       
T Consensus       124 s~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-----~~~--~~~~~~-----------------------  173 (316)
T 3bg1_A          124 SSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP-----GSL--IDHPSG-----------------------  173 (316)
T ss_dssp             CSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-------------CCS-----------------------
T ss_pred             cCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC-----ccc--cccccc-----------------------
Confidence            99999999999876422  2233557777776666532110     000  000000                       


Q ss_pred             EEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCcc--CcceeecCCcCeeEEEECCCC
Q psy15995        499 VTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSL--SPKAELDHLGPVTDCSFSPSN  576 (683)
Q Consensus       499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~s~~~  576 (683)
                                                   ...+++++|++|+.|+.|++||+.....  ......+|...|.+++|+|++
T Consensus       174 -----------------------------~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~  224 (316)
T 3bg1_A          174 -----------------------------QKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSI  224 (316)
T ss_dssp             -----------------------------CCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCS
T ss_pred             -----------------------------cCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCC
Confidence                                         0012357899999999999999975421  112234689999999999986


Q ss_pred             ----CEEEEEeCCCeEEEEECCCCcc--ccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCC
Q psy15995        577 ----EYLVASDAHRKVVLYRVPDFEL--AHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLAS  639 (683)
Q Consensus       577 ----~~l~~~~~d~~i~i~~~~~~~~--~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~  639 (683)
                          ++|++++.|++|++|++.+...  ........|...|.+++|+|++++||+++.|++|++|+...
T Consensus       225 ~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~  293 (316)
T 3bg1_A          225 GLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV  293 (316)
T ss_dssp             SCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred             CCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence                8999999999999999986321  11122344889999999999999999999999999999763

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=8.9e-34  Score=274.43  Aligned_cols=283  Identities=15%  Similarity=0.160  Sum_probs=235.4

Q ss_pred             eeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCe---eEEeccCCccccCeEEEEEccCCC-EEEEEECCCcEE
Q psy15995        266 MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASAD---LVSELGNPAHKGGVYAVAWKPDGT-QLLTASGDKTCK  341 (683)
Q Consensus       266 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~  341 (683)
                      ....+|...|.+++|+|++++|++++.||.|++|++.+++   ....+.  .|...|.+++|+|+++ +|++++.||.|+
T Consensus         5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~   82 (342)
T 1yfq_A            5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYVGTVQGEIL   82 (342)
T ss_dssp             ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred             ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcEEEEEcCCCeEE
Confidence            3445799999999999999999999999999999998876   223332  3899999999999999 999999999999


Q ss_pred             EEEC-CCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeee--ccccEEEEEEeCCCCEEE
Q psy15995        342 LWDI-ETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKG--HNKPITALALSPDRGTVF  418 (683)
Q Consensus       342 iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~  418 (683)
                      +||+ .+++.                                             ..+.+  |...|.+++|+| ++.++
T Consensus        83 ~wd~~~~~~~---------------------------------------------~~~~~~~~~~~v~~l~~~~-~~~l~  116 (342)
T 1yfq_A           83 KVDLIGSPSF---------------------------------------------QALTNNEANLGICRICKYG-DDKLI  116 (342)
T ss_dssp             EECSSSSSSE---------------------------------------------EECBSCCCCSCEEEEEEET-TTEEE
T ss_pred             EEEeccCCce---------------------------------------------EeccccCCCCceEEEEeCC-CCEEE
Confidence            9999 76643                                             22345  889999999999 99999


Q ss_pred             EEeCCCcEEEEcCCC---------CCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCC-CcccCCceecCCCC
Q psy15995        419 TGSHDGFITRWNAKT---------GENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSS-NAYSGPEVKLGSQP  488 (683)
Q Consensus       419 ~~~~dg~i~~w~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~-~~~~~~~~~~~~~~  488 (683)
                      +++.|+.|++||+++         ++......  +...+.++.+.++.+++++.|+.|++||+.. ....          
T Consensus       117 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----------  184 (342)
T 1yfq_A          117 AASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK--VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN----------  184 (342)
T ss_dssp             EEETTSEEEEECHHHHTTBCEEEEESCSSSSS--SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCC----------
T ss_pred             EEcCCCeEEEEcccccccccccccCCeeeEEe--eCCceEEEEecCCcEEEEeCCCeEEEEECCcccccc----------
Confidence            999999999999987         66555543  8889999999988899999999999999987 3210          


Q ss_pred             ceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEcc-CCCEEEEEcCCCcEEEEEcCCC------ccCcceee
Q psy15995        489 RGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDH-EHGLVAVGGADSKVHIYELNNK------SLSPKAEL  561 (683)
Q Consensus       489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~  561 (683)
                                              .......+...+.+++++| +++++++++.||.|++|+++..      +.. ....
T Consensus       185 ------------------------~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-~~~~  239 (342)
T 1yfq_A          185 ------------------------GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR-FAFR  239 (342)
T ss_dssp             ------------------------CEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC-EEEE
T ss_pred             ------------------------ceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccc-eeee
Confidence                                    1112233556789999999 9999999999999999999876      333 2222


Q ss_pred             cCC---------cCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeee-cccEEEEEecCCCCeEEEeecCCc
Q psy15995        562 DHL---------GPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFH-SAKVNCVAWSPDSALVASGSLDTT  631 (683)
Q Consensus       562 ~~~---------~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h-~~~v~~~~~s~d~~~l~~~~~d~~  631 (683)
                      .|.         ..|.+++|+|++++|++++.||.|++||+.+++.+....  +| ...|++++  |++++|++++.||.
T Consensus       240 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~h~~~v~~~~--~~~~~l~s~s~Dg~  315 (342)
T 1yfq_A          240 CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA--KFNEDSVVKIA--CSDNILCLATSDDT  315 (342)
T ss_dssp             CCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC--CCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred             cccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh--cccCCCceEec--CCCCeEEEEecCCc
Confidence            343         399999999999999999999999999999998875543  36 99999999  99999999999998


Q ss_pred             -EEEEeC
Q psy15995        632 -IIIWSL  637 (683)
Q Consensus       632 -v~iw~~  637 (683)
                       .+.|..
T Consensus       316 ~~~~~~~  322 (342)
T 1yfq_A          316 FKTNAAI  322 (342)
T ss_dssp             HHHCSSS
T ss_pred             ccccccc
Confidence             666664

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=4.9e-34  Score=276.23  Aligned_cols=280  Identities=14%  Similarity=0.137  Sum_probs=234.3

Q ss_pred             ccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccc---ccccccccCCCCcccceeeeeecceeeeEeeccce-
Q psy15995         79 DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH---ILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF-  154 (683)
Q Consensus        79 ~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-  154 (683)
                      ....+|.+.|++++|+|++++|++++.||.|++||+.+++.   ......+              ...+.+++|+|+++ 
T Consensus         5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~   70 (342)
T 1yfq_A            5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY--------------KHPLLCCNFIDNTDL   70 (342)
T ss_dssp             ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEEC--------------SSCEEEEEEEESSSE
T ss_pred             ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeec--------------CCceEEEEECCCCCc
Confidence            34568999999999999999999999999999999987751   2222222              27899999999999 


Q ss_pred             EEEeecCCccEEEEec-cccceeeeccccc--cCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccC---------CCce
Q psy15995        155 YIASGDISGKVRIWDT-VNKEHILKNEFHP--IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSET---------GTSV  222 (683)
Q Consensus       155 ~l~~~~~d~~i~iwd~-~~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~  222 (683)
                      +|++++.||.|++||+ .+++.   ..+..  |...|.+++|+| ++.+++++.++.  +.+|+..+         ++.+
T Consensus        71 ~l~~~~~dg~i~~wd~~~~~~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~--i~iwd~~~~~~~~~~~~~~~~  144 (342)
T 1yfq_A           71 QIYVGTVQGEILKVDLIGSPSF---QALTNNEANLGICRICKYG-DDKLIAASWDGL--IEVIDPRNYGDGVIAVKNLNS  144 (342)
T ss_dssp             EEEEEETTSCEEEECSSSSSSE---EECBSCCCCSCEEEEEEET-TTEEEEEETTSE--EEEECHHHHTTBCEEEEESCS
T ss_pred             EEEEEcCCCeEEEEEeccCCce---EeccccCCCCceEEEEeCC-CCEEEEEcCCCe--EEEEcccccccccccccCCee
Confidence            9999999999999999 87754   34455  889999999999 999998887654  78888887         7777


Q ss_pred             eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC-Cc--eeeeccccccCeEEEEECC-CCCEEEEEcCCCcEEE
Q psy15995        223 GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP-FK--FKMTKQEHSRFVQAVRYSP-SGSHFASAGFDGKVFL  298 (683)
Q Consensus       223 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i  298 (683)
                      ..+. |...|.+++|+|++   +++++.|+.|++||+++ +.  .......|...+.+++|+| +++++++++.||.|++
T Consensus       145 ~~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i  220 (342)
T 1yfq_A          145 NNTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAV  220 (342)
T ss_dssp             SSSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEE
T ss_pred             eEEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEE
Confidence            7776 89999999999886   99999999999999988 44  3344556888999999999 9999999999999999


Q ss_pred             EeCCCC------eeEEeccCCccc---------cCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceec
Q psy15995        299 YDGASA------DLVSELGNPAHK---------GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQ  363 (683)
Q Consensus       299 w~~~~~------~~~~~~~~~~~~---------~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  363 (683)
                      |+++..      +....+..  |.         ..|.+++|+|++++|++++.||.|++||+.+++.+..          
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~----------  288 (342)
T 1yfq_A          221 EFFDDQGDDYNSSKRFAFRC--HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN----------  288 (342)
T ss_dssp             EECCTTCCSTTCTTCEEEEC--CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE----------
T ss_pred             EEEcCCCcccccccceeeec--ccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhh----------
Confidence            999876      66666654  43         4999999999999999999999999999998766433          


Q ss_pred             eEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeec-cccEEEEEEeCCCCEEEEEeCCCc-EEEEc
Q psy15995        364 QVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGH-NKPITALALSPDRGTVFTGSHDGF-ITRWN  430 (683)
Q Consensus       364 ~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~-i~~w~  430 (683)
                                                        +..| ..+|.+++  |++++|++++.||. .+.+.
T Consensus       289 ----------------------------------~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~  321 (342)
T 1yfq_A          289 ----------------------------------FAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA  321 (342)
T ss_dssp             ----------------------------------CCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred             ----------------------------------hhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence                                              3456 78888888  89999999999997 55554

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=8.6e-34  Score=285.60  Aligned_cols=305  Identities=16%  Similarity=0.219  Sum_probs=229.6

Q ss_pred             cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc-----------eeeeccccc------------cCeEEEEECCC
Q psy15995        227 GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK-----------FKMTKQEHS------------RFVQAVRYSPS  283 (683)
Q Consensus       227 ~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~  283 (683)
                      .+.+.|++++|+|++++ |++|+.||.|++|+..+++           ....+.+|.            ..|.+++|+|+
T Consensus        26 ~~~~~V~~v~~s~~g~~-la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~  104 (447)
T 3dw8_B           26 AEADIISTVEFNHSGEL-LATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ  104 (447)
T ss_dssp             CGGGSEEEEEECSSSSE-EEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred             cccCcEEEEEECCCCCE-EEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence            46789999999999995 9999999999999988776           477788898            88999999999


Q ss_pred             C--CEEEEEcCCCcEEEEeCCCCeeEEe--------------------------------------ccCCccccCeEEEE
Q psy15995        284 G--SHFASAGFDGKVFLYDGASADLVSE--------------------------------------LGNPAHKGGVYAVA  323 (683)
Q Consensus       284 ~--~~l~~~~~dg~i~iw~~~~~~~~~~--------------------------------------~~~~~~~~~i~~~~  323 (683)
                      +  ..|++++.|+.|++||+.+++....                                      .....|...|.+++
T Consensus       105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~  184 (447)
T 3dw8_B          105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS  184 (447)
T ss_dssp             CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred             CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence            8  7999999999999999876544211                                      11134899999999


Q ss_pred             EccCCCEEEEEECCCcEEEEECCCCc-eeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeecc
Q psy15995        324 WKPDGTQLLTASGDKTCKLWDIETKS-VVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHN  402 (683)
Q Consensus       324 ~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~  402 (683)
                      |+|++++|+++ .|+.|++||++... ....+                                +..     ...+.+|.
T Consensus       185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~--------------------------------~~~-----~~~~~~~~  226 (447)
T 3dw8_B          185 INSDYETYLSA-DDLRINLWHLEITDRSFNIV--------------------------------DIK-----PANMEELT  226 (447)
T ss_dssp             ECTTSSEEEEE-CSSEEEEEETTEEEEEEEEE--------------------------------ECC-----CSSGGGCC
T ss_pred             EcCCCCEEEEe-CCCeEEEEECCCCCceeeee--------------------------------ecc-----cccccccC
Confidence            99999999998 79999999998432 22211                                111     12356789


Q ss_pred             ccEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCCcc----eeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcc
Q psy15995        403 KPITALALSPDR-GTVFTGSHDGFITRWNAKTGEND----RVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAY  477 (683)
Q Consensus       403 ~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~----~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~  477 (683)
                      ..|.+++|+|++ ++|++++.||.|++||+++++..    ..+ ..|....                             
T Consensus       227 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~-----------------------------  276 (447)
T 3dw8_B          227 EVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLF-EEPEDPS-----------------------------  276 (447)
T ss_dssp             CCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEE-CCC---------------------------------
T ss_pred             cceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEe-ccCCCcc-----------------------------
Confidence            999999999998 99999999999999999887642    222 1111000                             


Q ss_pred             cCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCC-CccC
Q psy15995        478 SGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNN-KSLS  556 (683)
Q Consensus       478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~  556 (683)
                                                         .......+...+.+++++|++++|++++. +.|++||+.. ++..
T Consensus       277 -----------------------------------~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~  320 (447)
T 3dw8_B          277 -----------------------------------NRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPV  320 (447)
T ss_dssp             ------------------------------------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCS
T ss_pred             -----------------------------------ccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccc
Confidence                                               00000012236789999999999999999 9999999987 5554


Q ss_pred             cceeecCCcC---------------eeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccc------------------
Q psy15995        557 PKAELDHLGP---------------VTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKE------------------  603 (683)
Q Consensus       557 ~~~~~~~~~~---------------v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~------------------  603 (683)
                      .... .|...               +..++|+|++++|++++.||.|++||+.+++......                  
T Consensus       321 ~~~~-~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (447)
T 3dw8_B          321 ETYQ-VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCA  399 (447)
T ss_dssp             CCEE-SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEEC
T ss_pred             ceee-ccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccc
Confidence            3333 34321               3349999999999999999999999999877642110                  


Q ss_pred             ------------eeeecccEEEEEecCCCCeEEEeecCCcEEEEeCC
Q psy15995        604 ------------WGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       604 ------------~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~  638 (683)
                                  ...+...|.+++|+|++++||+++.++ +++|.-+
T Consensus       400 ~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~  445 (447)
T 3dw8_B          400 SGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK  445 (447)
T ss_dssp             SSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred             cCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence                        001346789999999999999998876 8888643

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=5.8e-34  Score=281.52  Aligned_cols=291  Identities=17%  Similarity=0.192  Sum_probs=233.2

Q ss_pred             eEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc----eeeeccccccCeEEEEECC-CCCEEEEEcCCCcEEEEeCCCC--
Q psy15995        232 INSCDFKPSRPFRIITGSEDNTIAVFEGPPFK----FKMTKQEHSRFVQAVRYSP-SGSHFASAGFDGKVFLYDGASA--  304 (683)
Q Consensus       232 v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~--  304 (683)
                      ...++++|+...++++++.||.|++|++....    ....+.+|...|.+++|+| ++++|++++.||.|++||+.++  
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~  116 (402)
T 2aq5_A           37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL  116 (402)
T ss_dssp             SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred             CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence            44678888876556668999999999986542    3445778999999999999 8999999999999999999987  


Q ss_pred             -----eeEEeccCCccccCeEEEEEccCC-CEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEe
Q psy15995        305 -----DLVSELGNPAHKGGVYAVAWKPDG-TQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVS  378 (683)
Q Consensus       305 -----~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  378 (683)
                           +.+..+..  |...|.+++|+|++ ++|++++.|+.|++||+++++.+..+.                       
T Consensus       117 ~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----------------------  171 (402)
T 2aq5_A          117 VLPLREPVITLEG--HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG-----------------------  171 (402)
T ss_dssp             SSCBCSCSEEEEC--CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC-----------------------
T ss_pred             ccccCCceEEecC--CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe-----------------------
Confidence                 45556654  99999999999998 699999999999999999876543320                       


Q ss_pred             cCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeE
Q psy15995        379 LSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELL  458 (683)
Q Consensus       379 ~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l  458 (683)
                                         ...|...|.+++|+|++++|++++.||.|++||+++++........|..            
T Consensus       172 -------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------------  220 (402)
T 2aq5_A          172 -------------------PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEG------------  220 (402)
T ss_dssp             -------------------TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCS------------
T ss_pred             -------------------cCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCC------------
Confidence                               0458889999999999999999999999999999877654443111211            


Q ss_pred             EEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEE
Q psy15995        459 YTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAV  538 (683)
Q Consensus       459 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  538 (683)
                                                                                     ..+.+++++|++++|++
T Consensus       221 ---------------------------------------------------------------~~~~~~~~~~~~~~l~~  237 (402)
T 2aq5_A          221 ---------------------------------------------------------------TRPVHAVFVSEGKILTT  237 (402)
T ss_dssp             ---------------------------------------------------------------SSCCEEEECSTTEEEEE
T ss_pred             ---------------------------------------------------------------CcceEEEEcCCCcEEEE
Confidence                                                                           13578899999999999


Q ss_pred             E---cCCCcEEEEEcCCCcc-CcceeecCCcCeeEEEECCCCCEEEE-EeCCCeEEEEECCCCcc-ccccceeeecccEE
Q psy15995        539 G---GADSKVHIYELNNKSL-SPKAELDHLGPVTDCSFSPSNEYLVA-SDAHRKVVLYRVPDFEL-AHNKEWGFHSAKVN  612 (683)
Q Consensus       539 ~---~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~d~~i~i~~~~~~~~-~~~~~~~~h~~~v~  612 (683)
                      |   +.|+.|++||+.+... .......+...+.+++|+|++++|++ ++.|+.|++||+.+++. ........|...|.
T Consensus       238 g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~  317 (402)
T 2aq5_A          238 GFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQR  317 (402)
T ss_dssp             EECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCS
T ss_pred             eccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCccc
Confidence            9   7999999999988765 33344467888999999999999975 55799999999998874 22222211568999


Q ss_pred             EEEecCCCCeEEEeecCCcEEEEeCCCCcee
Q psy15995        613 CVAWSPDSALVASGSLDTTIIIWSLASPAKH  643 (683)
Q Consensus       613 ~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~  643 (683)
                      +++|+|++.++++  .|+.+++|++.++...
T Consensus       318 ~~~~sp~~~~~~s--~~~~~~~~~l~~~~~~  346 (402)
T 2aq5_A          318 GMGYMPKRGLEVN--KCEIARFYKLHERKCE  346 (402)
T ss_dssp             EEEECCGGGSCGG--GTEEEEEEEEETTEEE
T ss_pred             ceEEeccccccee--cceeEEEEEcCCCcEE
Confidence            9999999998875  4669999999886543

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=1.3e-33  Score=281.88  Aligned_cols=276  Identities=19%  Similarity=0.325  Sum_probs=234.5

Q ss_pred             CCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccc
Q psy15995         45 GQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKN  123 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~  123 (683)
                      ..+.+++  +++++|+++ .++.|++||+.+++....+.+|...|.+++|  ++++|++|+.||.|++||+.+++.+..+
T Consensus       134 ~~v~~~~--~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~  209 (435)
T 1p22_A          134 KGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTL  209 (435)
T ss_dssp             CCEEEEE--CCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEE
T ss_pred             CcEEEEE--ECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence            3456654  489999887 6889999999999999999999999999998  7889999999999999999999888777


Q ss_pred             ccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceee-eccccccCCCeeEEEEcCCCCeEEE
Q psy15995        124 EFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHIL-KNEFHPIGGPIKDIAWSPDNQRMVV  202 (683)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~  202 (683)
                      ..|.              ..+.+++|++  .++++++.||.|++||+.+++... ...+..|...|.+++|  +++++++
T Consensus       210 ~~h~--------------~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s  271 (435)
T 1p22_A          210 IHHC--------------EAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVS  271 (435)
T ss_dssp             CCCC--------------SCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEE
T ss_pred             cCCC--------------CcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEE
Confidence            6664              6788888864  599999999999999999876542 2445677899999999  7889998


Q ss_pred             EecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECC
Q psy15995        203 VGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSP  282 (683)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~  282 (683)
                      ++.++.  +.+|+.++++.+..+.+|...|.++.+++  . .+++++.||.|++||+++++.+..+.+|...|.+++|  
T Consensus       272 ~~~dg~--i~vwd~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--  344 (435)
T 1p22_A          272 ASGDRT--IKVWNTSTCEFVRTLNGHKRGIACLQYRD--R-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--  344 (435)
T ss_dssp             EETTSE--EEEEETTTCCEEEEEECCSSCEEEEEEET--T-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--
T ss_pred             EeCCCe--EEEEECCcCcEEEEEcCCCCcEEEEEeCC--C-EEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--
Confidence            887654  78999999999999999999999999954  4 5999999999999999999999999999999999999  


Q ss_pred             CCCEEEEEcCCCcEEEEeCCCCe---------eEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeE
Q psy15995        283 SGSHFASAGFDGKVFLYDGASAD---------LVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSE  353 (683)
Q Consensus       283 ~~~~l~~~~~dg~i~iw~~~~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  353 (683)
                      ++++|++|+.||.|++||+.++.         .+..+..  |.+.|.+++|  ++++|++++.||.|++||+.+......
T Consensus       345 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~  420 (435)
T 1p22_A          345 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE--HSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQA  420 (435)
T ss_dssp             CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECC--CSSCCCCEEE--CSSCEEECCSSSEEEEEC---------
T ss_pred             cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccC--CCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCccc
Confidence            78899999999999999987765         6677754  9999999999  688999999999999999988765443

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=3e-33  Score=279.29  Aligned_cols=289  Identities=21%  Similarity=0.293  Sum_probs=237.6

Q ss_pred             ccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec
Q psy15995         81 YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD  160 (683)
Q Consensus        81 ~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  160 (683)
                      ..+|...|.++++  ++++|++|+.||.|++||+.+++.+..+..|.              ..|.++++  ++++|++|+
T Consensus       129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~--------------~~v~~l~~--~~~~l~sg~  190 (435)
T 1p22_A          129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHT--------------GSVLCLQY--DERVIITGS  190 (435)
T ss_dssp             CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCS--------------SCEEEEEC--CSSEEEEEE
T ss_pred             ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCC--------------CcEEEEEE--CCCEEEEEc
Confidence            3467788999886  89999999999999999999998888777665              67888887  889999999


Q ss_pred             CCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCce---eeeecCCcCeEEEEe
Q psy15995        161 ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSV---GEISGQSKPINSCDF  237 (683)
Q Consensus       161 ~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~  237 (683)
                      .||.|++||+.+++.+.  .+..|...|.+++|++  ..+++++.++.  +.+|+..++...   ..+.+|...|.+++|
T Consensus       191 ~dg~i~vwd~~~~~~~~--~~~~h~~~v~~l~~~~--~~l~s~s~dg~--i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~  264 (435)
T 1p22_A          191 SDSTVRVWDVNTGEMLN--TLIHHCEAVLHLRFNN--GMMVTCSKDRS--IAVWDMASPTDITLRRVLVGHRAAVNVVDF  264 (435)
T ss_dssp             TTSCEEEEESSSCCEEE--EECCCCSCEEEEECCT--TEEEEEETTSC--EEEEECSSSSCCEEEEEECCCSSCEEEEEE
T ss_pred             CCCeEEEEECCCCcEEE--EEcCCCCcEEEEEEcC--CEEEEeeCCCc--EEEEeCCCCCCceeeeEecCCCCcEEEEEe
Confidence            99999999999988654  4556789999999975  47887776654  789999887765   678899999999999


Q ss_pred             ecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCcccc
Q psy15995        238 KPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKG  317 (683)
Q Consensus       238 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~  317 (683)
                        +++ .+++++.||.|++||+++++.+..+.+|...|.++.+  +++++++++.||.|++||+++++.+..+..  |..
T Consensus       265 --~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--h~~  337 (435)
T 1p22_A          265 --DDK-YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG--HEE  337 (435)
T ss_dssp             --ETT-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECC--CSS
T ss_pred             --CCC-EEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeC--CcC
Confidence              445 5999999999999999999999999999999999999  467999999999999999999999998875  999


Q ss_pred             CeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceee
Q psy15995        318 GVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRV  397 (683)
Q Consensus       318 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~  397 (683)
                      .|.+++|  ++++|++++.||.|++||+.++......                                   .....+..
T Consensus       338 ~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~-----------------------------------~~~~~~~~  380 (435)
T 1p22_A          338 LVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAP-----------------------------------AGTLCLRT  380 (435)
T ss_dssp             CEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSC-----------------------------------TTTTEEEE
T ss_pred             cEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCcccc-----------------------------------ccchheee
Confidence            9999999  6889999999999999998765421000                                   00113445


Q ss_pred             eeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCccee
Q psy15995        398 IKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRV  439 (683)
Q Consensus       398 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~  439 (683)
                      +.+|...|.+++|  ++.+|++++.||.|++||+.+......
T Consensus       381 ~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~  420 (435)
T 1p22_A          381 LVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQA  420 (435)
T ss_dssp             ECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC---------
T ss_pred             ccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCccc
Confidence            6779999999999  778999999999999999988765443

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=4.9e-33  Score=268.47  Aligned_cols=292  Identities=15%  Similarity=0.226  Sum_probs=216.7

Q ss_pred             EEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeE
Q psy15995         69 IRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNIL  148 (683)
Q Consensus        69 v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  148 (683)
                      +|++.+.+.+..+.+|...|++++|+|||++||+|+.++ ++|||+.+++.......                ..+..+.
T Consensus         3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~----------------~~~~~~~   65 (355)
T 3vu4_A            3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM----------------RHLSKVR   65 (355)
T ss_dssp             ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC----------------SCCCEEE
T ss_pred             cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec----------------CCeEEEE
Confidence            567777777777889999999999999999999998875 88999988765543222                2356677


Q ss_pred             eeccceEE-EeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCC-Cceeeee
Q psy15995        149 VLSIGFYI-ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG-TSVGEIS  226 (683)
Q Consensus       149 ~s~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~  226 (683)
                      +.+++..+ ++++.|++|++||..+++.+....   +...|.+++|+++.  ++++..+   .+.+|+..++ +.+..+.
T Consensus        66 ~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~---~~~~v~~v~~~~~~--~~~~~~~---~i~i~d~~~~~~~~~~~~  137 (355)
T 3vu4_A           66 MLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK---VDAPVKDLFLSREF--IVVSYGD---VISVFKFGNPWKRITDDI  137 (355)
T ss_dssp             ECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE---CSSCEEEEEECSSE--EEEEETT---EEEEEESSTTCCBSSCCE
T ss_pred             EcCCCCEEEEEECCccEEEEEECCCCcEEEEEE---CCCceEEEEEcCCE--EEEEEcC---EEEEEECCCCceeeEEec
Confidence            88888777 567888999999999998776554   44789999999874  4444433   3789999887 7777666


Q ss_pred             cCCcCeEEEEeecCCCeEEEE-eeCCCeEEEEcCCCCc----------------eeeeccccccCeEEEEECCCCCEEEE
Q psy15995        227 GQSKPINSCDFKPSRPFRIIT-GSEDNTIAVFEGPPFK----------------FKMTKQEHSRFVQAVRYSPSGSHFAS  289 (683)
Q Consensus       227 ~~~~~v~~~~~~~~~~~~l~~-~~~d~~i~iw~~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~l~~  289 (683)
                      .   +...+++++  .+++++ |+.||.|++||+.+++                ....+.+|...|.+++|+|++++|++
T Consensus       138 ~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s  212 (355)
T 3vu4_A          138 R---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVAT  212 (355)
T ss_dssp             E---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEE
T ss_pred             c---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEE
Confidence            5   455666777  432333 7899999999998765                26778899999999999999999999


Q ss_pred             EcCCCc-EEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEE-------------
Q psy15995        290 AGFDGK-VFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFI-------------  355 (683)
Q Consensus       290 ~~~dg~-i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------------  355 (683)
                      ++.|++ |++||+++++.+..+....|...|.+++|+|++++|++++.|+.|++||++.+.......             
T Consensus       213 ~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~  292 (355)
T 3vu4_A          213 CSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSE  292 (355)
T ss_dssp             EETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCS
T ss_pred             EeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccc
Confidence            999998 999999999999888632388999999999999999999999999999998654221111             


Q ss_pred             -------ec--CcceeceEEEEecCCEEEEEecCCcEEEEecCC
Q psy15995        356 -------MG--NQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN  390 (683)
Q Consensus       356 -------~~--~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~  390 (683)
                             ..  .......+++.++++.+++++.+|.+++|++..
T Consensus       293 ~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~  336 (355)
T 3vu4_A          293 WSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF  336 (355)
T ss_dssp             SCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred             cceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence                   00  111225577888999999999999999999865

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.5e-33  Score=273.94  Aligned_cols=272  Identities=21%  Similarity=0.297  Sum_probs=206.4

Q ss_pred             CCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC--CCceeeeccccccCeEEEEECCC--CCEEEEEcCCC
Q psy15995        219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP--PFKFKMTKQEHSRFVQAVRYSPS--GSHFASAGFDG  294 (683)
Q Consensus       219 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg  294 (683)
                      |+.+..+.+|...|++++|+|++++ |++++.||.|++||+.  +.+....+.+|...|.+++|+++  +++|++++.||
T Consensus         1 G~~~~~~~~h~~~v~~~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg   79 (379)
T 3jrp_A            1 GSMVVIANAHNELIHDAVLDYYGKR-LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG   79 (379)
T ss_dssp             ----CCEEECCCCEEEEEECSSSSE-EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred             CCccEEecCCcccEEEEEEcCCCCE-EEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence            3566788999999999999999995 9999999999999987  66777788999999999999987  89999999999


Q ss_pred             cEEEEeCCCCe--eEEeccCCccccCeEEEEEccC--CCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEec
Q psy15995        295 KVFLYDGASAD--LVSELGNPAHKGGVYAVAWKPD--GTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ  370 (683)
Q Consensus       295 ~i~iw~~~~~~--~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (683)
                      .|++||+.+++  ....+.  .|...|.+++|+|+  +++|++++.|+.|++||+..+.....                 
T Consensus        80 ~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-----------------  140 (379)
T 3jrp_A           80 KVLIWKEENGRWSQIAVHA--VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP-----------------  140 (379)
T ss_dssp             CEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE-----------------
T ss_pred             EEEEEEcCCCceeEeeeec--CCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee-----------------
Confidence            99999999987  455554  48999999999999  99999999999999999987643221                 


Q ss_pred             CCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeE
Q psy15995        371 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQING  450 (683)
Q Consensus       371 ~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~  450 (683)
                                               ..+..|...|.+++|+|........                              
T Consensus       141 -------------------------~~~~~~~~~v~~~~~~~~~~~~~~~------------------------------  165 (379)
T 3jrp_A          141 -------------------------IIIDAHAIGVNSASWAPATIEEDGE------------------------------  165 (379)
T ss_dssp             -------------------------EEEECCTTCEEEEEECCCC------------------------------------
T ss_pred             -------------------------EEecCCCCceEEEEEcCcccccccc------------------------------
Confidence                                     2345688899999999952110000                              


Q ss_pred             EEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEc
Q psy15995        451 MKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLD  530 (683)
Q Consensus       451 ~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  530 (683)
                                                                                                  ....
T Consensus       166 ----------------------------------------------------------------------------~~~~  169 (379)
T 3jrp_A          166 ----------------------------------------------------------------------------HNGT  169 (379)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ----------------------------------------------------------------------------ccCC
Confidence                                                                                        0001


Q ss_pred             cCCCEEEEEcCCCcEEEEEcCCCccCc---ceeecCCcCeeEEEECCC---CCEEEEEeCCCeEEEEECCCCccc---cc
Q psy15995        531 HEHGLVAVGGADSKVHIYELNNKSLSP---KAELDHLGPVTDCSFSPS---NEYLVASDAHRKVVLYRVPDFELA---HN  601 (683)
Q Consensus       531 ~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~v~~~~~s~~---~~~l~~~~~d~~i~i~~~~~~~~~---~~  601 (683)
                      +++.++++++.||.|++||+.++....   .....|...|.+++|+|+   +++|++++.||.|++||+.++...   ..
T Consensus       170 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  249 (379)
T 3jrp_A          170 KESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTL  249 (379)
T ss_dssp             CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEE
T ss_pred             CCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeee
Confidence            233344444444444444443332110   112247888999999999   899999999999999999886421   11


Q ss_pred             cceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCc
Q psy15995        602 KEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPA  641 (683)
Q Consensus       602 ~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~  641 (683)
                      .....|...|++++|+|++++|++++.||.|++|++....
T Consensus       250 ~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~  289 (379)
T 3jrp_A          250 LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG  289 (379)
T ss_dssp             SSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred             eccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence            2222388899999999999999999999999999998543

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=5.8e-33  Score=270.09  Aligned_cols=259  Identities=17%  Similarity=0.275  Sum_probs=218.2

Q ss_pred             cccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc----cccccccccCCCCcccceeeeeecceeeeEeec--
Q psy15995         78 SDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE----HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS--  151 (683)
Q Consensus        78 ~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--  151 (683)
                      ...+.+|.+.|++++|+|++++||+++.||.|++||+.++.    ....+..|.              ..|.+++|+|  
T Consensus         4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~--------------~~v~~~~~~~~~   69 (351)
T 3f3f_A            4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHD--------------SSIVAIDWASPE   69 (351)
T ss_dssp             CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCS--------------SCEEEEEECCGG
T ss_pred             cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCC--------------CcEEEEEEcCCC
Confidence            45678999999999999999999999999999999998764    233333333              7899999999  


Q ss_pred             cceEEEeecCCccEEEEeccccce-------eeeccccccCCCeeEEEEcCC--CCeEEEEecCCceEEEEEEccCCCce
Q psy15995        152 IGFYIASGDISGKVRIWDTVNKEH-------ILKNEFHPIGGPIKDIAWSPD--NQRMVVVGEGRERFGHVFMSETGTSV  222 (683)
Q Consensus       152 ~~~~l~~~~~d~~i~iwd~~~~~~-------~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~~~~~~~~~~~~~~~~~~  222 (683)
                      ++++|++++.||.|++||+.+++.       .....+..|...|.+++|+|+  ++++++++.++.  +.+|+..+++.+
T Consensus        70 d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~--v~iwd~~~~~~~  147 (351)
T 3f3f_A           70 YGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGI--LRLYDALEPSDL  147 (351)
T ss_dssp             GCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCE--EEEEECSSTTCT
T ss_pred             CCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCc--EEEecCCChHHh
Confidence            699999999999999999988642       223445677899999999999  999999887654  789998887766


Q ss_pred             eeee-------------cCCcCeEEEEeecC---CCeEEEEeeCCCeEEEEcCCCCce--eeeccccccCeEEEEECCCC
Q psy15995        223 GEIS-------------GQSKPINSCDFKPS---RPFRIITGSEDNTIAVFEGPPFKF--KMTKQEHSRFVQAVRYSPSG  284 (683)
Q Consensus       223 ~~~~-------------~~~~~v~~~~~~~~---~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~v~~~~~~~~~  284 (683)
                      ..+.             .|...+.+++|+|+   +. .+++++.++.+.+|+...++.  ...+.+|...|.+++|+|++
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~  226 (351)
T 3f3f_A          148 RSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSI  226 (351)
T ss_dssp             TCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCS
T ss_pred             ccccccccccccccccCCcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCC
Confidence            5543             68889999999997   66 599999999998888777765  66778899999999999998


Q ss_pred             ----CEEEEEcCCCcEEEEeCCCC----------------------------------------------eeEEeccCCc
Q psy15995        285 ----SHFASAGFDGKVFLYDGASA----------------------------------------------DLVSELGNPA  314 (683)
Q Consensus       285 ----~~l~~~~~dg~i~iw~~~~~----------------------------------------------~~~~~~~~~~  314 (683)
                          ++|++++.||.|++||+.++                                              +.+..+..  
T Consensus       227 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  304 (351)
T 3f3f_A          227 GRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD--  304 (351)
T ss_dssp             SCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECT--
T ss_pred             CCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec--
Confidence                89999999999999998764                                              44555543  


Q ss_pred             cccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEE
Q psy15995        315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       315 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  355 (683)
                      |...|.+++|+|++++|++++.||.|++|++.+++....+.
T Consensus       305 h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~  345 (351)
T 3f3f_A          305 HNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS  345 (351)
T ss_dssp             TSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred             ccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence            89999999999999999999999999999999887665543

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=5.8e-33  Score=271.98  Aligned_cols=295  Identities=13%  Similarity=0.234  Sum_probs=237.5

Q ss_pred             EEeCCCCcccccccCcccceEEEEECCC---CcEEEEecCCCCEEEEeCCC-cccc-cccccccCCCCcccceeeeeecc
Q psy15995         69 IRNIENPAISDIYTEHSCAVNVAKYSPS---GFYIASGDISGKVRIWDTVN-KEHI-LKNEFHPIGGPIKDIGTLLSLTS  143 (683)
Q Consensus        69 v~~~~~~~~~~~~~~h~~~v~~~~~s~d---~~~las~~~dg~i~iwd~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~  143 (683)
                      .++....+.+..+.+|.+.|++++|+|+   |++||+|+.||.|++||+.+ +..+ ..+..|.              ..
T Consensus        23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~--------------~~   88 (368)
T 3mmy_A           23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHT--------------GP   88 (368)
T ss_dssp             CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECS--------------SC
T ss_pred             cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecccc--------------CC
Confidence            3455666777889999999999999999   69999999999999999987 4333 3444443              78


Q ss_pred             eeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEE--cCCCCeEEEEecCCceEEEEEEccCCCc
Q psy15995        144 IRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAW--SPDNQRMVVVGEGRERFGHVFMSETGTS  221 (683)
Q Consensus       144 i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~~~~~~~~~~~~~~~~~~~  221 (683)
                      |.+++|+|++++|++++.||.|++||+.+++.+.   ...|...|.+++|  +|+++++++++.++.  +.+|+..+++.
T Consensus        89 v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~--i~vwd~~~~~~  163 (368)
T 3mmy_A           89 VLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ---IAQHDAPVKTIHWIKAPNYSCVMTGSWDKT--LKFWDTRSSNP  163 (368)
T ss_dssp             EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE---EEECSSCEEEEEEEECSSCEEEEEEETTSE--EEEECSSCSSC
T ss_pred             EEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee---eccccCceEEEEEEeCCCCCEEEEccCCCc--EEEEECCCCcE
Confidence            9999999999999999999999999999987553   4457799999999  999999999887754  78999999998


Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeec--cccccCeEEEEECCCCCE----EEEEcCCCc
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK--QEHSRFVQAVRYSPSGSH----FASAGFDGK  295 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~----l~~~~~dg~  295 (683)
                      +..+..+. .+.++.+.++   .+++++.++.+.+|+..........  ..+...+.++++.++...    +++++.||.
T Consensus       164 ~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~  239 (368)
T 3mmy_A          164 MMVLQLPE-RCYCADVIYP---MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR  239 (368)
T ss_dssp             SEEEECSS-CEEEEEEETT---EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSE
T ss_pred             EEEEecCC-CceEEEecCC---eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCc
Confidence            88888775 5666666654   4888899999999998776543322  234455666666655543    999999999


Q ss_pred             EEEEeCCCC---eeEEeccCCcccc------------CeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcc
Q psy15995        296 VFLYDGASA---DLVSELGNPAHKG------------GVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQV  360 (683)
Q Consensus       296 i~iw~~~~~---~~~~~~~~~~~~~------------~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  360 (683)
                      |++|++...   .....+..  |..            .|.+++|+|++++|++++.||.|++||+.+++.+..       
T Consensus       240 i~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~-------  310 (368)
T 3mmy_A          240 VAIHYINPPNPAKDNFTFKC--HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT-------  310 (368)
T ss_dssp             EEEEESSCSCHHHHSEEEEC--SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE-------
T ss_pred             EEEEecCCCCccccceeeee--eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEE-------
Confidence            999999887   34444443  444            799999999999999999999999999998765433       


Q ss_pred             eeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        361 EDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       361 ~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                                                           +..|...|.+++|+|++++|++++.|+..+.|++.
T Consensus       311 -------------------------------------~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~  345 (368)
T 3mmy_A          311 -------------------------------------SEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY  345 (368)
T ss_dssp             -------------------------------------CCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred             -------------------------------------ecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence                                                 35688999999999999999999998866555543

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=4.8e-33  Score=270.64  Aligned_cols=311  Identities=19%  Similarity=0.242  Sum_probs=220.0

Q ss_pred             eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC----ceeeeccccccCeEEEEECC--CCCEEEEEcCCCcE
Q psy15995        223 GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF----KFKMTKQEHSRFVQAVRYSP--SGSHFASAGFDGKV  296 (683)
Q Consensus       223 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i  296 (683)
                      ..+.+|.+.|++++|+|++++ |++++.||.|++||+.++    +....+.+|...|.+++|+|  ++++|++++.||.|
T Consensus         5 ~~~~gH~~~v~~~~~~~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v   83 (351)
T 3f3f_A            5 PFDSGHDDLVHDVVYDFYGRH-VATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV   83 (351)
T ss_dssp             CEECCCSSCEEEEEECSSSSE-EEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred             ccCcccccceeEEEEcCCCCE-EEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence            446789999999999999995 999999999999998876    46667788999999999999  69999999999999


Q ss_pred             EEEeCCCC---------eeEEeccCCccccCeEEEEEccC--CCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceE
Q psy15995        297 FLYDGASA---------DLVSELGNPAHKGGVYAVAWKPD--GTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQV  365 (683)
Q Consensus       297 ~iw~~~~~---------~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  365 (683)
                      ++||+.++         +.+..+..  |...|.+++|+|+  ++++++++.||.|++||+++++.+..+.......    
T Consensus        84 ~vwd~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~----  157 (351)
T 3f3f_A           84 KLWEEDPDQEECSGRRWNKLCTLND--SKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMK----  157 (351)
T ss_dssp             EEEEECTTSCTTSSCSEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE----
T ss_pred             EEEecCCCcccccccCcceeeeecc--cCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccc----
Confidence            99999887         44566654  9999999999999  9999999999999999999887654433211100    


Q ss_pred             EEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCC---CCEEEEEeCCCcEEEEcCCCCCcceec-c
Q psy15995        366 SCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPD---RGTVFTGSHDGFITRWNAKTGENDRVQ-G  441 (683)
Q Consensus       366 ~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~~w~~~~~~~~~~~-~  441 (683)
                                                 ........|...+.+++|+|+   +..+++++.++.+.+|+...++..... .
T Consensus       158 ---------------------------~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  210 (351)
T 3f3f_A          158 ---------------------------VLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKL  210 (351)
T ss_dssp             ---------------------------SCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEEC
T ss_pred             ---------------------------ccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeec
Confidence                                       000112357788999999997   899999999999988877655432111 0


Q ss_pred             CCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCC
Q psy15995        442 AGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPID  521 (683)
Q Consensus       442 ~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  521 (683)
                      ..                                                                            +.
T Consensus       211 ~~----------------------------------------------------------------------------h~  214 (351)
T 3f3f_A          211 PG----------------------------------------------------------------------------HK  214 (351)
T ss_dssp             CC----------------------------------------------------------------------------CC
T ss_pred             CC----------------------------------------------------------------------------CC
Confidence            11                                                                            23


Q ss_pred             CCCcEEEEccCC----CEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEe----CCCeEEEEEC
Q psy15995        522 YEPSSISLDHEH----GLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASD----AHRKVVLYRV  593 (683)
Q Consensus       522 ~~~~~~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~d~~i~i~~~  593 (683)
                      ..+.+++++|++    ++|++++.||.|++||+..+...... ............++....++.+.    ....+.+|+.
T Consensus       215 ~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (351)
T 3f3f_A          215 SLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLAS-EESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSN  293 (351)
T ss_dssp             SCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----------------------------------------CCS
T ss_pred             cceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCcccc-CCcccceeccCCCcccccccccccccccceeeeeccc
Confidence            356788999998    89999999999999999876443221 12333334444444444444443    2334445544


Q ss_pred             CCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEe
Q psy15995        594 PDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIII  646 (683)
Q Consensus       594 ~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~  646 (683)
                      ...+.+.  .+.+|...|++++|+|++++|++++.||.|++|++.+++....+
T Consensus       294 ~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~  344 (351)
T 3f3f_A          294 LQVELLS--EHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM  344 (351)
T ss_dssp             EEEEEEE--EECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred             ccccEEE--EEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence            4444433  33448999999999999999999999999999999987655444

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-32  Score=274.86  Aligned_cols=282  Identities=11%  Similarity=0.023  Sum_probs=231.3

Q ss_pred             CeEEEeeCCCCCeEEEecCCeEEEEeCCCCc---ccccccC---------------------------------------
Q psy15995         46 QPIVLGGDPKGKNFLYTNGNSVIIRNIENPA---ISDIYTE---------------------------------------   83 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~---~~~~~~~---------------------------------------   83 (683)
                      .+.+++|||||++|+++.++.|.+||+.+++   .+..+..                                       
T Consensus         6 p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (450)
T 2vdu_B            6 PLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIK   85 (450)
T ss_dssp             CCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC-------------------------------------
T ss_pred             cEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcccc
Confidence            4678889999999999999999999999988   5544443                                       


Q ss_pred             ---------------cccceEEEEECCCCcEE-EEecCCCCEEEEeCC--CcccccccccccCCCCcccceeeeeeccee
Q psy15995         84 ---------------HSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTV--NKEHILKNEFHPIGGPIKDIGTLLSLTSIR  145 (683)
Q Consensus        84 ---------------h~~~v~~~~~s~d~~~l-as~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  145 (683)
                                     |.+.|++++|+|+|++| |+++.||.|+|||+.  +++.+..+..+..            ...+.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~------------~~~v~  153 (450)
T 2vdu_B           86 RTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCF------------SKRPN  153 (450)
T ss_dssp             --------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEEC------------SSCEE
T ss_pred             ccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccC------------CCCce
Confidence                           44479999999999996 899999999999998  7776666543221            16789


Q ss_pred             eeEeeccceEEEeecCCccEEEEecccccee--eeccccccCCCeeEEEEcCC---CCeEEEEecCCceEEEEEEccCCC
Q psy15995        146 NILVLSIGFYIASGDISGKVRIWDTVNKEHI--LKNEFHPIGGPIKDIAWSPD---NQRMVVVGEGRERFGHVFMSETGT  220 (683)
Q Consensus       146 ~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~~~~~~~~~~~~~~~~  220 (683)
                      +++|+|++++|++++.+|.+++|++.+++..  ....+..|...|.+++|+|+   ++++++++.+..  +.+|+..+++
T Consensus       154 ~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~--i~vwd~~~~~  231 (450)
T 2vdu_B          154 AISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEH--IKISHYPQCF  231 (450)
T ss_dssp             EEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSC--EEEEEESCTT
T ss_pred             EEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCc--EEEEECCCCc
Confidence            9999999999999999999999999887644  22355678899999999999   889998887654  7899999998


Q ss_pred             ceee-eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc-------------------------cccC
Q psy15995        221 SVGE-ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE-------------------------HSRF  274 (683)
Q Consensus       221 ~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-------------------------~~~~  274 (683)
                      .+.. +.+|...|.+++|+ ++.+ |++++.|+.|++||+.+++.+..+..                         ....
T Consensus       232 ~~~~~~~~h~~~v~~~~~s-d~~~-l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (450)
T 2vdu_B          232 IVDKWLFGHKHFVSSICCG-KDYL-LLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFA  309 (450)
T ss_dssp             CEEEECCCCSSCEEEEEEC-STTE-EEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCC
T ss_pred             eeeeeecCCCCceEEEEEC-CCCE-EEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEE
Confidence            8877 66999999999999 8885 99999999999999999988777652                         2357


Q ss_pred             eEEEEECCCCCEEEEEc-CCCcEEEEeC--CCC---eeEEeccCCccccCeEEEEEccCCCEEEEEEC-------CCcEE
Q psy15995        275 VQAVRYSPSGSHFASAG-FDGKVFLYDG--ASA---DLVSELGNPAHKGGVYAVAWKPDGTQLLTASG-------DKTCK  341 (683)
Q Consensus       275 v~~~~~~~~~~~l~~~~-~dg~i~iw~~--~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------dg~i~  341 (683)
                      |.+++|+|++++|++++ .++.|++|++  .++   +.+..+..  + ..|.+++|+|++ .+++.+.       +..|.
T Consensus       310 v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~--~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~  385 (450)
T 2vdu_B          310 VSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITF--P-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAK  385 (450)
T ss_dssp             EEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEEC--S-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEE
T ss_pred             EEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEecc--C-CceEEEEecCCc-EEEEEecccCCCCCCcceE
Confidence            89999999999999988 8999999999  555   56666654  5 789999999954 4555433       44578


Q ss_pred             EEECCC
Q psy15995        342 LWDIET  347 (683)
Q Consensus       342 iwd~~~  347 (683)
                      +|.+..
T Consensus       386 v~~~~~  391 (450)
T 2vdu_B          386 FIEYNL  391 (450)
T ss_dssp             EEEEET
T ss_pred             EEEEEc
Confidence            887653

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=2.2e-33  Score=277.46  Aligned_cols=286  Identities=14%  Similarity=0.182  Sum_probs=233.0

Q ss_pred             CeEEEeeCCCCCeEEE--ecCCeEEEEeCCCC----cccccccCcccceEEEEECC-CCcEEEEecCCCCEEEEeCCCcc
Q psy15995         46 QPIVLGGDPKGKNFLY--TNGNSVIIRNIENP----AISDIYTEHSCAVNVAKYSP-SGFYIASGDISGKVRIWDTVNKE  118 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~--~~~~~i~v~~~~~~----~~~~~~~~h~~~v~~~~~s~-d~~~las~~~dg~i~iwd~~~~~  118 (683)
                      ....++++|+...+++  +.+|.|.||++...    .....+.+|.+.|++++|+| ++++||+|+.||.|+|||+.++.
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~  115 (402)
T 2aq5_A           36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG  115 (402)
T ss_dssp             SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred             CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence            3445778888877664  35889999998654    34556889999999999999 99999999999999999999873


Q ss_pred             -------cccccccccCCCCcccceeeeeecceeeeEeeccc-eEEEeecCCccEEEEeccccceeeeccccccCCCeeE
Q psy15995        119 -------HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIG-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKD  190 (683)
Q Consensus       119 -------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~  190 (683)
                             .+..+..|.              ..|.+++|+|++ .+|++++.|+.|++||+.+++.+.......|...|.+
T Consensus       116 ~~~~~~~~~~~~~~h~--------------~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~  181 (402)
T 2aq5_A          116 LVLPLREPVITLEGHT--------------KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYS  181 (402)
T ss_dssp             CSSCBCSCSEEEECCS--------------SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEE
T ss_pred             CccccCCceEEecCCC--------------CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEE
Confidence                   333333333              789999999998 6999999999999999999886654433667899999


Q ss_pred             EEEcCCCCeEEEEecCCceEEEEEEccCCCceeee-ecCCcC-eEEEEeecCCCeEEEEe---eCCCeEEEEcCCCCce-
Q psy15995        191 IAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEI-SGQSKP-INSCDFKPSRPFRIITG---SEDNTIAVFEGPPFKF-  264 (683)
Q Consensus       191 ~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~l~~~---~~d~~i~iw~~~~~~~-  264 (683)
                      ++|+|+++++++++.++.  +.+|+.++++.+..+ ..|.+. +.++.|+|++.+ ++++   +.|+.|++||..+++. 
T Consensus       182 ~~~~~~~~~l~~~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~g~~~~~d~~i~iwd~~~~~~~  258 (402)
T 2aq5_A          182 VDWSRDGALICTSCRDKR--VRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKI-LTTGFSRMSERQVALWDTKHLEEP  258 (402)
T ss_dssp             EEECTTSSCEEEEETTSE--EEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEE-EEEEECTTCCEEEEEEETTBCSSC
T ss_pred             EEECCCCCEEEEEecCCc--EEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcE-EEEeccCCCCceEEEEcCccccCC
Confidence            999999999999987654  789999999999888 788776 899999999884 8888   7899999999988664 


Q ss_pred             eeec-cccccCeEEEEECCCCCEEE-EEcCCCcEEEEeCCCCee-EEeccCCccccCeEEEEEccCCCEEEEEECCCcEE
Q psy15995        265 KMTK-QEHSRFVQAVRYSPSGSHFA-SAGFDGKVFLYDGASADL-VSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCK  341 (683)
Q Consensus       265 ~~~~-~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  341 (683)
                      .... ..|...+.+++|+|++++|+ +++.||.|++||+.+++. +..+....+...|.+++|+|++.++++  .++.++
T Consensus       259 ~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~  336 (402)
T 2aq5_A          259 LSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIAR  336 (402)
T ss_dssp             SEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEE
T ss_pred             ceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEE
Confidence            2222 25777899999999999886 555799999999998873 444433225689999999999988765  566899


Q ss_pred             EEECCCCce
Q psy15995        342 LWDIETKSV  350 (683)
Q Consensus       342 iwd~~~~~~  350 (683)
                      +|++.++..
T Consensus       337 ~~~l~~~~~  345 (402)
T 2aq5_A          337 FYKLHERKC  345 (402)
T ss_dssp             EEEEETTEE
T ss_pred             EEEcCCCcE
Confidence            999987654

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=3.8e-31  Score=264.81  Aligned_cols=306  Identities=15%  Similarity=0.118  Sum_probs=239.2

Q ss_pred             EeeCCC--eEEEEcCCCC--ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccC---CccccCe
Q psy15995        247 TGSEDN--TIAVFEGPPF--KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN---PAHKGGV  319 (683)
Q Consensus       247 ~~~~d~--~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~~~i  319 (683)
                      +++.++  .|..+|..++  +....+..+ ..+.+++|+|++.++++++.++.|++||+.+++....+..   ..|...+
T Consensus        94 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v  172 (433)
T 3bws_A           94 RKPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFV  172 (433)
T ss_dssp             SSGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEE
T ss_pred             cccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCce
Confidence            344455  4444554334  444555444 4466899999777888888889999999999988874322   2478899


Q ss_pred             EEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeee
Q psy15995        320 YAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIK  399 (683)
Q Consensus       320 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~  399 (683)
                      .+++|+|+++++++++.|+.|++||+++++.+..+                                            .
T Consensus       173 ~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~--------------------------------------------~  208 (433)
T 3bws_A          173 ETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV--------------------------------------------D  208 (433)
T ss_dssp             EEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE--------------------------------------------E
T ss_pred             eEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE--------------------------------------------c
Confidence            99999999999999999999999999887655432                                            3


Q ss_pred             eccccEEEEEEeCCCCEEE-EEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCccc
Q psy15995        400 GHNKPITALALSPDRGTVF-TGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYS  478 (683)
Q Consensus       400 ~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~  478 (683)
                      .|...+.+++|+|+++.++ +++.|+.|++||+.+++......                                     
T Consensus       209 ~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~-------------------------------------  251 (433)
T 3bws_A          209 LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD-------------------------------------  251 (433)
T ss_dssp             CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC-------------------------------------
T ss_pred             CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec-------------------------------------
Confidence            5677899999999999885 55579999999998765443331                                     


Q ss_pred             CCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEc--------CCCcEEEEEc
Q psy15995        479 GPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGG--------ADSKVHIYEL  550 (683)
Q Consensus       479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~dg~i~i~d~  550 (683)
                                                               ....+.+++++|+++++++++        .|+.|++||+
T Consensus       252 -----------------------------------------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~  290 (433)
T 3bws_A          252 -----------------------------------------KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSM  290 (433)
T ss_dssp             -----------------------------------------CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEET
T ss_pred             -----------------------------------------CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEEC
Confidence                                                     011256788999999998887        5889999999


Q ss_pred             CCCccCcceeecCCcCeeEEEECCCCCEE-EEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeec-
Q psy15995        551 NNKSLSPKAELDHLGPVTDCSFSPSNEYL-VASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSL-  628 (683)
Q Consensus       551 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~-  628 (683)
                      .+++.....  .+...+.+++|+|+++++ ++++.++.|++||+.+++......   +...+.+++|+|++++|++++. 
T Consensus       291 ~~~~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~  365 (433)
T 3bws_A          291 DKEKLIDTI--GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP---VFDKPNTIALSPDGKYLYVSCRG  365 (433)
T ss_dssp             TTTEEEEEE--EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSEEEEEECC
T ss_pred             CCCcEEeec--cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec---CCCCCCeEEEcCCCCEEEEEecC
Confidence            988765333  456688999999999765 566899999999999888764433   6788999999999999988876 


Q ss_pred             --------------CCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCCeEEEeeC-CCcEEEEeeccC
Q psy15995        629 --------------DTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQ-DCNTKIWEIAPF  683 (683)
Q Consensus       629 --------------d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~-d~~v~vw~~~~~  683 (683)
                                    ||.|++||+.+++....+..   ...+.+++|+ ++++|++++. |+.|++|+++.|
T Consensus       366 ~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~~  433 (433)
T 3bws_A          366 PNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA---GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDGF  433 (433)
T ss_dssp             CCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSCEEEEEETTTTEEEEEEETTC
T ss_pred             CCccccccccccccceEEEEEECCCCcEEEEecC---CCCCceEEEcCCCCEEEEEECCCCeEEEEEecCC
Confidence                          57999999999988877764   4579999999 7778887774 999999999876

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8e-32  Score=270.08  Aligned_cols=301  Identities=15%  Similarity=0.090  Sum_probs=230.5

Q ss_pred             ccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc---cccccccccCC-------------CC-----------------
Q psy15995         85 SCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE---HILKNEFHPIG-------------GP-----------------  131 (683)
Q Consensus        85 ~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~---~~~~~~~~~~~-------------~~-----------------  131 (683)
                      ..++++++|+|||++|+++ .++.|++||+.+++   .+..+..+...             ..                 
T Consensus         4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (450)
T 2vdu_B            4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD   82 (450)
T ss_dssp             ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred             cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence            3578999999999977766 46799999999998   55444322110             00                 


Q ss_pred             ----------cccceeeeeecceeeeEeeccceEE-EeecCCccEEEEecc--ccceeeeccccccCCCeeEEEEcCCCC
Q psy15995        132 ----------IKDIGTLLSLTSIRNILVLSIGFYI-ASGDISGKVRIWDTV--NKEHILKNEFHPIGGPIKDIAWSPDNQ  198 (683)
Q Consensus       132 ----------~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~i~~~~~s~~~~  198 (683)
                                ........+...|.+++|+|++++| ++++.||.|++||+.  +++.+.......+...|.+++|+|+++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~  162 (450)
T 2vdu_B           83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT  162 (450)
T ss_dssp             -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred             cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence                      0000001122369999999999996 899999999999999  777665554446678999999999999


Q ss_pred             eEEEEecCCceEEEEEEccCCCcee----eeecCCcCeEEEEeecC---CCeEEEEeeCCCeEEEEcCCCCceeee-ccc
Q psy15995        199 RMVVVGEGRERFGHVFMSETGTSVG----EISGQSKPINSCDFKPS---RPFRIITGSEDNTIAVFEGPPFKFKMT-KQE  270 (683)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~~  270 (683)
                      +|++++.+..  +.+|+...+....    .+.+|...|.+++|+|+   +++ |++++.|+.|++||+++++.+.. +.+
T Consensus       163 ~l~~~~~~g~--v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~-l~s~~~d~~i~vwd~~~~~~~~~~~~~  239 (450)
T 2vdu_B          163 TVIIADKFGD--VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQF-IITSDRDEHIKISHYPQCFIVDKWLFG  239 (450)
T ss_dssp             EEEEEETTSE--EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEE-EEEEETTSCEEEEEESCTTCEEEECCC
T ss_pred             EEEEEeCCCc--EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcE-EEEEcCCCcEEEEECCCCceeeeeecC
Confidence            9999887543  5777777666544    78899999999999999   774 99999999999999999988877 668


Q ss_pred             cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC-----------------------ccccCeEEEEEccC
Q psy15995        271 HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP-----------------------AHKGGVYAVAWKPD  327 (683)
Q Consensus       271 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----------------------~~~~~i~~~~~~~~  327 (683)
                      |...|.+++|+ ++++|++++.|+.|++||+.+++.+..+...                       .....|.+++|+|+
T Consensus       240 h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~  318 (450)
T 2vdu_B          240 HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKN  318 (450)
T ss_dssp             CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSS
T ss_pred             CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCC
Confidence            99999999999 9999999999999999999999988777531                       13457899999999


Q ss_pred             CCEEEEEE-CCCcEEEEEC--CCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeecccc
Q psy15995        328 GTQLLTAS-GDKTCKLWDI--ETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKP  404 (683)
Q Consensus       328 ~~~l~~~~-~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~  404 (683)
                      ++++++++ .++.|++|++  ..+..+.                                         .+..+..| ..
T Consensus       319 ~~~l~~~~~~d~~i~iw~~~~~~~~~l~-----------------------------------------~~~~~~~~-~~  356 (450)
T 2vdu_B          319 LPFVAFFVEATKCIIILEMSEKQKGDLA-----------------------------------------LKQIITFP-YN  356 (450)
T ss_dssp             SSEEEEEETTCSEEEEEEECSSSTTCEE-----------------------------------------EEEEEECS-SC
T ss_pred             CCEEEEEECCCCeEEEEEeccCCCCcee-----------------------------------------eccEeccC-Cc
Confidence            99999998 8999999998  4432211                                         12334555 78


Q ss_pred             EEEEEEeCCCCEEEEE-eC------CCcEEEEcCCC
Q psy15995        405 ITALALSPDRGTVFTG-SH------DGFITRWNAKT  433 (683)
Q Consensus       405 v~~~~~~~~~~~l~~~-~~------dg~i~~w~~~~  433 (683)
                      +.+++|+|++ .+++. +.      +..|.+|.+..
T Consensus       357 v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~~  391 (450)
T 2vdu_B          357 VISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYNL  391 (450)
T ss_dssp             EEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEET
T ss_pred             eEEEEecCCc-EEEEEecccCCCCCCcceEEEEEEc
Confidence            9999999964 44444 32      44578886543

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=5.5e-31  Score=259.80  Aligned_cols=331  Identities=15%  Similarity=0.154  Sum_probs=254.2

Q ss_pred             eEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEE-EEecCCCCEEEEeCCCcccccccccccCCCCcccc
Q psy15995         58 NFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDI  135 (683)
Q Consensus        58 ~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l-as~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  135 (683)
                      +++++ .++.|.+||+++++.+..+.+|. .+.+++|+|+|++| ++++.|+.|++||+.+++.+..+..+         
T Consensus         4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~---------   73 (391)
T 1l0q_A            4 AYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG---------   73 (391)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS---------
T ss_pred             EEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC---------
Confidence            34444 57899999999999988888776 48999999999987 67779999999999998877665443         


Q ss_pred             eeeeeecceeeeEeeccceEEE-eecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEE
Q psy15995        136 GTLLSLTSIRNILVLSIGFYIA-SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF  214 (683)
Q Consensus       136 ~~~~~~~~i~~~~~s~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~  214 (683)
                            ..+.+++|+|++++|+ +++.++.|++||+.+++.+....   +...+.+++|+|+++.+++++... ..+.+|
T Consensus        74 ------~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~-~~v~~~  143 (391)
T 1l0q_A           74 ------SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK---TGKSPLGLALSPDGKKLYVTNNGD-KTVSVI  143 (391)
T ss_dssp             ------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSEEEEEETTT-TEEEEE
T ss_pred             ------CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe---CCCCcceEEECCCCCEEEEEeCCC-CEEEEE
Confidence                  4688999999999875 55567999999999987654433   236789999999999886655433 347889


Q ss_pred             EccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEc---
Q psy15995        215 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAG---  291 (683)
Q Consensus       215 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---  291 (683)
                      +..+++.+..+..+ ..+..++|+|+++.++++++.++.|++||+.+++....+. +...+.+++|+|+++++++++   
T Consensus       144 d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~  221 (391)
T 1l0q_A          144 NTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDK  221 (391)
T ss_dssp             ETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECS
T ss_pred             ECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCc
Confidence            98888888887766 4569999999999756788899999999999988777665 456789999999999998887   


Q ss_pred             CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEE-EEEECCCcEEEEECCCCceeeEEEecCccee--------
Q psy15995        292 FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQL-LTASGDKTCKLWDIETKSVVSEFIMGNQVED--------  362 (683)
Q Consensus       292 ~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--------  362 (683)
                      .++.|++||+.+++.+..+..  + ..+.+++|+|+++++ ++++.|+.|++||+.+++.+..+........        
T Consensus       222 ~~~~v~~~d~~~~~~~~~~~~--~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (391)
T 1l0q_A          222 YFNTVSMIDTGTNKITARIPV--G-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSI  298 (391)
T ss_dssp             SCCEEEEEETTTTEEEEEEEC--C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEEC
T ss_pred             CCCcEEEEECCCCeEEEEEec--C-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecc
Confidence            689999999999998888764  3 457899999999987 5667899999999999988877765433211        


Q ss_pred             ------ceEEEEec--------C--CEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEE
Q psy15995        363 ------QQVSCLWQ--------G--DYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTG  420 (683)
Q Consensus       363 ------~~~~~~~~--------~--~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  420 (683)
                            ....+..+        .  -.+...+.+...++|+...+...     .+..+  ...|+++|.+.++.
T Consensus       299 ~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~-----~~~~~--~~~~~~~g~y~~~~  365 (391)
T 1l0q_A          299 PVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSS-----KKQNP--THTYSETGIYTVRL  365 (391)
T ss_dssp             SSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCEE-----CSSSC--EECCSSCEEEEEEE
T ss_pred             cccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCccc-----CcCCC--eEEeCCCceEEEEE
Confidence                  01111111        1  23444456778899998764321     12222  35688888777643

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=1.1e-30  Score=261.44  Aligned_cols=304  Identities=11%  Similarity=0.026  Sum_probs=235.3

Q ss_pred             eEEEEeCCCC--cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecc
Q psy15995         66 SVIIRNIENP--AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTS  143 (683)
Q Consensus        66 ~i~v~~~~~~--~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (683)
                      .|..+|.+++  +.+..+..+. .+.+++|+|+++++++++.++.|++||+.+++..........         ..+...
T Consensus       102 ~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~---------~~~~~~  171 (433)
T 3bws_A          102 KLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKY---------KKKLGF  171 (433)
T ss_dssp             CEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHH---------HTTCCE
T ss_pred             EEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccc---------cccCCc
Confidence            5555565445  4555565554 466999999888889999999999999999877653321110         011257


Q ss_pred             eeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCcee
Q psy15995        144 IRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVG  223 (683)
Q Consensus       144 i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  223 (683)
                      +.+++|+++++++++++.|+.|++||+.+++.+..  +..+...+.+++|+|+++.+++++... ..+.+|+.++++.+.
T Consensus       172 v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~i~~~d~~~~~~~~  248 (433)
T 3bws_A          172 VETISIPEHNELWVSQMQANAVHVFDLKTLAYKAT--VDLTGKWSKILLYDPIRDLVYCSNWIS-EDISVIDRKTKLEIR  248 (433)
T ss_dssp             EEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEE--EECSSSSEEEEEEETTTTEEEEEETTT-TEEEEEETTTTEEEE
T ss_pred             eeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEE--EcCCCCCeeEEEEcCCCCEEEEEecCC-CcEEEEECCCCcEEE
Confidence            88999999999999999999999999998876543  345668899999999999987776432 237889988888877


Q ss_pred             eeecCCcCeEEEEeecCCCeEEEEee--------CCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEE-EEEcCCC
Q psy15995        224 EISGQSKPINSCDFKPSRPFRIITGS--------EDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHF-ASAGFDG  294 (683)
Q Consensus       224 ~~~~~~~~v~~~~~~~~~~~~l~~~~--------~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg  294 (683)
                      .+..+. .+.+++|+|+++. +++++        .|+.|++||..+++....+ .|...+.+++|+|+++.+ ++++.++
T Consensus       249 ~~~~~~-~~~~~~~~~~g~~-l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~  325 (433)
T 3bws_A          249 KTDKIG-LPRGLLLSKDGKE-LYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCS  325 (433)
T ss_dssp             ECCCCS-EEEEEEECTTSSE-EEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTT
T ss_pred             EecCCC-CceEEEEcCCCCE-EEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCC
Confidence            776654 5899999999986 66666        5889999999988876655 456689999999999755 6668899


Q ss_pred             cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECC---------------CcEEEEECCCCceeeEEEecCc
Q psy15995        295 KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD---------------KTCKLWDIETKSVVSEFIMGNQ  359 (683)
Q Consensus       295 ~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~~~~~~~~~~  359 (683)
                      .|++||+.+++....+.   +...+.+++|+|+++++++++.+               |.|++||+.+++.+..      
T Consensus       326 ~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~------  396 (433)
T 3bws_A          326 KIEVYDLKEKKVQKSIP---VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF------  396 (433)
T ss_dssp             EEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE------
T ss_pred             EEEEEECCCCcEEEEec---CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE------
Confidence            99999999998888775   66789999999999999888763               4666666665544332      


Q ss_pred             ceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeC-CCcEEEEcCCC
Q psy15995        360 VEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSH-DGFITRWNAKT  433 (683)
Q Consensus       360 ~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~w~~~~  433 (683)
                                                            +.. ...+.+++|+|++++|++++. |+.|++|++..
T Consensus       397 --------------------------------------~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~  432 (433)
T 3bws_A          397 --------------------------------------WEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG  432 (433)
T ss_dssp             --------------------------------------EEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred             --------------------------------------ecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence                                                  222 346889999999999988775 99999999753

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-33  Score=298.51  Aligned_cols=255  Identities=20%  Similarity=0.284  Sum_probs=213.4

Q ss_pred             cccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCC--CcccccccccccCCCCcccceeeeeecceeeeEeecc--c
Q psy15995         78 SDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTV--NKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI--G  153 (683)
Q Consensus        78 ~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~  153 (683)
                      +.++.+|.++|++++|+|+|++|++|+.||.|+|||+.  +++.+..+..|.              ..|.+++|+|+  +
T Consensus         2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~--------------~~V~~l~~s~~~~~   67 (753)
T 3jro_A            2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHE--------------GPVWRVDWAHPKFG   67 (753)
T ss_dssp             ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCS--------------SCEEEEEECCTTSC
T ss_pred             eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCc--------------CceEEEEecCCCCC
Confidence            35688999999999999999999999999999999998  445555555554              78999999998  9


Q ss_pred             eEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCC--CCeEEEEecCCceEEEEEEccCC--CceeeeecCC
Q psy15995        154 FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPD--NQRMVVVGEGRERFGHVFMSETG--TSVGEISGQS  229 (683)
Q Consensus       154 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  229 (683)
                      ++|++++.||.|++||+.+++......+..|...|.+++|+|+  ++.+++++.++.  +.+|+...+  .....+.+|.
T Consensus        68 ~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~--I~vwdl~~~~~~~~~~~~~~~  145 (753)
T 3jro_A           68 TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK--VSVVEFKENGTTSPIIIDAHA  145 (753)
T ss_dssp             SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE--EEEEECCSSSCCCCEEEECCS
T ss_pred             CEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCc--EEEEEeecCCCcceeEeecCC
Confidence            9999999999999999999875555666778899999999999  999999887754  788888876  3455678999


Q ss_pred             cCeEEEEeecC-------------CCeEEEEeeCCCeEEEEcCCCC----ceeeeccccccCeEEEEECCC---CCEEEE
Q psy15995        230 KPINSCDFKPS-------------RPFRIITGSEDNTIAVFEGPPF----KFKMTKQEHSRFVQAVRYSPS---GSHFAS  289 (683)
Q Consensus       230 ~~v~~~~~~~~-------------~~~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~~---~~~l~~  289 (683)
                      ..|.+++|+|.             +. .+++++.||.|++||++++    .....+.+|...|.+++|+|+   ++++++
T Consensus       146 ~~v~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s  224 (753)
T 3jro_A          146 IGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS  224 (753)
T ss_dssp             SCEEEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred             CceEEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEE
Confidence            99999999994             66 5999999999999998776    556677899999999999999   899999


Q ss_pred             EcCCCcEEEEeCCCCeeE---EeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCc
Q psy15995        290 AGFDGKVFLYDGASADLV---SELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       290 ~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      ++.||.|++||+.+++..   .......|...|.+++|+|+++++++++.||.|++|++..+.
T Consensus       225 ~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~  287 (753)
T 3jro_A          225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG  287 (753)
T ss_dssp             EESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred             EecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence            999999999999886421   122223488899999999999999999999999999998654

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=2.6e-30  Score=254.95  Aligned_cols=274  Identities=15%  Similarity=0.159  Sum_probs=226.2

Q ss_pred             cEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEE-EeecCCccEEEEecccccee
Q psy15995         98 FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYI-ASGDISGKVRIWDTVNKEHI  176 (683)
Q Consensus        98 ~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~d~~i~iwd~~~~~~~  176 (683)
                      .++++++.|+.|++||+.+++.+..+..+               ..+.+++|+|++++| ++++.|+.|++||+.+++.+
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~---------------~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~   67 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNKVTATIPVG---------------SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI   67 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEEECS---------------SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE
T ss_pred             EEEEEcCCCCEEEEEECCCCeEEEEeecC---------------CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE
Confidence            46788999999999999999877766554               457899999999977 67779999999999998866


Q ss_pred             eeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEE
Q psy15995        177 LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAV  256 (683)
Q Consensus       177 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i  256 (683)
                      ......   ..+.+++|+|+++++++++... ..+.+|+.++++.+..+..+ ..+.+++|+|+++.++++++.++.|++
T Consensus        68 ~~~~~~---~~v~~~~~spdg~~l~~~~~~~-~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~  142 (391)
T 1l0q_A           68 ATVPAG---SSPQGVAVSPDGKQVYVTNMAS-STLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSV  142 (391)
T ss_dssp             EEEECS---SSEEEEEECTTSSEEEEEETTT-TEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             EEEECC---CCccceEECCCCCEEEEEECCC-CEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEE
Confidence            544332   4899999999999998776543 23789999988888777755 468999999999975688899999999


Q ss_pred             EcCCCCceeeeccccccCeEEEEECCCCCEE-EEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEE
Q psy15995        257 FEGPPFKFKMTKQEHSRFVQAVRYSPSGSHF-ASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS  335 (683)
Q Consensus       257 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  335 (683)
                      ||..+++....+..+ ..+.+++|+|+++.+ ++++.++.|++||+.+++....+.   +...+.+++|+|+++++++++
T Consensus       143 ~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~  218 (391)
T 1l0q_A          143 INTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK---VEAAPSGIAVNPEGTKAYVTN  218 (391)
T ss_dssp             EETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---CSSEEEEEEECTTSSEEEEEE
T ss_pred             EECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe---cCCCccceEECCCCCEEEEEe
Confidence            999999888877765 457999999999977 577888999999999998887775   556889999999999999888


Q ss_pred             ---CCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeC
Q psy15995        336 ---GDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSP  412 (683)
Q Consensus       336 ---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  412 (683)
                         .++.|++||+.+++.+..+                                            ..| ..+.+++|+|
T Consensus       219 ~~~~~~~v~~~d~~~~~~~~~~--------------------------------------------~~~-~~~~~~~~s~  253 (391)
T 1l0q_A          219 VDKYFNTVSMIDTGTNKITARI--------------------------------------------PVG-PDPAGIAVTP  253 (391)
T ss_dssp             ECSSCCEEEEEETTTTEEEEEE--------------------------------------------ECC-SSEEEEEECT
T ss_pred             cCcCCCcEEEEECCCCeEEEEE--------------------------------------------ecC-CCccEEEEcc
Confidence               6899999999987654433                                            222 2468899999


Q ss_pred             CCCEE-EEEeCCCcEEEEcCCCCCcceec
Q psy15995        413 DRGTV-FTGSHDGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       413 ~~~~l-~~~~~dg~i~~w~~~~~~~~~~~  440 (683)
                      +++++ ++++.|+.|++||+.+++.....
T Consensus       254 dg~~l~~s~~~d~~v~v~d~~~~~~~~~~  282 (391)
T 1l0q_A          254 DGKKVYVALSFXNTVSVIDTATNTITATM  282 (391)
T ss_dssp             TSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence            99887 57788999999999988776554

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=1e-31  Score=259.24  Aligned_cols=281  Identities=12%  Similarity=0.105  Sum_probs=219.9

Q ss_pred             cccCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEE-EEecCCCCEEEEeCCCccc
Q psy15995         41 RTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEH  119 (683)
Q Consensus        41 ~~~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l-as~~~dg~i~iwd~~~~~~  119 (683)
                      ..+.+.+.+++|||||++|+++.++.+++||.++++......  ...+..++++++++++ ++++.|++|++||+.+++.
T Consensus        16 ~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~   93 (355)
T 3vu4_A           16 NHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD   93 (355)
T ss_dssp             ---CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEE
T ss_pred             ccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcE
Confidence            345678999999999999999988889999998877654433  2358889999988888 4677889999999999988


Q ss_pred             ccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEecccc-ceeeeccccccCCCeeEEEEcCCCC
Q psy15995        120 ILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNK-EHILKNEFHPIGGPIKDIAWSPDNQ  198 (683)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~  198 (683)
                      +..+..+               ..+.++.++++...++   .++.|++||+.++ +.+.....     +...+++++  .
T Consensus        94 ~~~~~~~---------------~~v~~v~~~~~~~~~~---~~~~i~i~d~~~~~~~~~~~~~-----~~~~~~~s~--~  148 (355)
T 3vu4_A           94 VSRIKVD---------------APVKDLFLSREFIVVS---YGDVISVFKFGNPWKRITDDIR-----FGGVCEFSN--G  148 (355)
T ss_dssp             EEEEECS---------------SCEEEEEECSSEEEEE---ETTEEEEEESSTTCCBSSCCEE-----EEEEEEEET--T
T ss_pred             EEEEECC---------------CceEEEEEcCCEEEEE---EcCEEEEEECCCCceeeEEecc-----CCceEEEEc--c
Confidence            7766533               5688899988764433   3789999999987 54433222     445566777  6


Q ss_pred             eEEEEecCCceEEEEEEccCCC----------------ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCe-EEEEcCCC
Q psy15995        199 RMVVVGEGRERFGHVFMSETGT----------------SVGEISGQSKPINSCDFKPSRPFRIITGSEDNT-IAVFEGPP  261 (683)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-i~iw~~~~  261 (683)
                      ++++++...+..+.+|+..++.                .+..+.+|...|++++|+|++.+ |++++.|++ |++||+++
T Consensus       149 ~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~-l~s~s~d~~~v~iwd~~~  227 (355)
T 3vu4_A          149 LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM-VATCSQDGTIIRVFKTED  227 (355)
T ss_dssp             EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSE-EEEEETTCSEEEEEETTT
T ss_pred             EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE-EEEEeCCCCEEEEEECCC
Confidence            7777644445558999988765                26788999999999999999995 999999998 99999999


Q ss_pred             Cceeeecc-c-cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEE--ecc------------------C-CccccC
Q psy15995        262 FKFKMTKQ-E-HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVS--ELG------------------N-PAHKGG  318 (683)
Q Consensus       262 ~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~------------------~-~~~~~~  318 (683)
                      ++.+..+. + |...|.+++|+|++++|++++.|++|++||++.+....  .+.                  . ......
T Consensus       228 ~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (355)
T 3vu4_A          228 GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVR  307 (355)
T ss_dssp             CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCC
T ss_pred             CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCC
Confidence            99999988 5 99999999999999999999999999999997653211  110                  0 011223


Q ss_pred             eEEEEEccCCCEEEEEECCCcEEEEECCCCc
Q psy15995        319 VYAVAWKPDGTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       319 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      ...++|+++++.+++++.||.+++|++..+.
T Consensus       308 ~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~  338 (355)
T 3vu4_A          308 GCKIAWISESSLVVVWPHTRMIETFKVVFDD  338 (355)
T ss_dssp             CCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred             ceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence            4678999999999999999999999986544

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=2.1e-31  Score=241.50  Aligned_cols=276  Identities=10%  Similarity=0.048  Sum_probs=206.2

Q ss_pred             CCCCCe--EEEecCCeEEEEeCCCC---cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccccc
Q psy15995         53 DPKGKN--FLYTNGNSVIIRNIENP---AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHP  127 (683)
Q Consensus        53 s~~~~~--l~~~~~~~i~v~~~~~~---~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~  127 (683)
                      .+..+.  +++++...|.+|+..++   +.++++++|+.+|..++++||-.-|+...-. .+.                 
T Consensus        49 ~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~-----------------  110 (356)
T 2w18_A           49 RAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALG-NLE-----------------  110 (356)
T ss_dssp             ----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEEC-SSS-----------------
T ss_pred             cCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeec-ccc-----------------
Confidence            344443  55668889999999999   8899999999999999999987544433211 110                 


Q ss_pred             CCCCcccceeeeeecceeeeEeecc----ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEE
Q psy15995        128 IGGPIKDIGTLLSLTSIRNILVLSI----GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV  203 (683)
Q Consensus       128 ~~~~~~~~~~~~~~~~i~~~~~s~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  203 (683)
                                   ...|+.++++||    ++++++++.+  +.+|++.+++.+.. ....|.+.|..++|+|+|+.+.  
T Consensus       111 -------------~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~s-s~~g~d~~V~~~~~s~dG~~~~--  172 (356)
T 2w18_A          111 -------------IREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSS-SGTLSDQQVEVMTFAEDGGGKE--  172 (356)
T ss_dssp             -------------EEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEE-ESSSTTCEEEEEEECTTSCEEE--
T ss_pred             -------------ccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEe-cccCCCCcEEEEEECCCCceee--
Confidence                         167899999999    9999998854  88899877654332 2345678888888888877655  


Q ss_pred             ecCCceEEEEEEccCCCceeeeecCCcCeEEEEeec---CCCeEEEEeeCCCeEEEEcCCCCceeeeccccc---cCeEE
Q psy15995        204 GEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKP---SRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS---RFVQA  277 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~---~~v~~  277 (683)
                                          .+.+|...++.++|+|   +++ +|++++.|++|++||+.+++.+..+.+|.   ..+.+
T Consensus       173 --------------------s~~~~~~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~  231 (356)
T 2w18_A          173 --------------------NQFLMPPEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCH  231 (356)
T ss_dssp             --------------------EEEECCCSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEE
T ss_pred             --------------------eeccCCCceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEE
Confidence                                3457888888999998   566 59999999999999999999999998654   46788


Q ss_pred             EEECCCCCEE------------EEEcCCCcEEEEeCCCCeeEEecc---CCccccCeEEEEEccCCCEEEEEECCCcEEE
Q psy15995        278 VRYSPSGSHF------------ASAGFDGKVFLYDGASADLVSELG---NPAHKGGVYAVAWKPDGTQLLTASGDKTCKL  342 (683)
Q Consensus       278 ~~~~~~~~~l------------~~~~~dg~i~iw~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  342 (683)
                      ++|+|+|+++            ++|+.|++|++||..+++.+..+.   ..+|...+.+..++  +..+++++.|++|+|
T Consensus       232 vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkI  309 (356)
T 2w18_A          232 KAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAI  309 (356)
T ss_dssp             EEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred             EEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEE
Confidence            8999999876            567789999999999998876542   12355555544444  778999999999999


Q ss_pred             EECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEE-EEEEeCCCCEEEEEe
Q psy15995        343 WDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPIT-ALALSPDRGTVFTGS  421 (683)
Q Consensus       343 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~  421 (683)
                      ||+.+++.+.++                                            .+|...+. .++|+|||++|++|+
T Consensus       310 WDl~tGk~l~tL--------------------------------------------~gH~~~vvs~vafSPDG~~LaSGS  345 (356)
T 2w18_A          310 WDLLLGQCTALL--------------------------------------------PPVSDQHWSFVKWSGTDSHLLAGQ  345 (356)
T ss_dssp             EETTTCSEEEEE--------------------------------------------CCC--CCCCEEEECSSSSEEEEEC
T ss_pred             EECCCCcEEEEe--------------------------------------------cCCCCCeEEEEEECCCCCEEEEEE
Confidence            999998876543                                            45666544 589999999999999


Q ss_pred             CCCcEEEEcC
Q psy15995        422 HDGFITRWNA  431 (683)
Q Consensus       422 ~dg~i~~w~~  431 (683)
                      .|++|++||+
T Consensus       346 ~D~TIklWd~  355 (356)
T 2w18_A          346 KDGNIFVYHY  355 (356)
T ss_dssp             TTSCEEEEEE
T ss_pred             CCCcEEEecC
Confidence            9999999985

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-31  Score=258.69  Aligned_cols=247  Identities=13%  Similarity=0.087  Sum_probs=191.8

Q ss_pred             EECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecC
Q psy15995        279 RYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGN  358 (683)
Q Consensus       279 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  358 (683)
                      .+.++++.+++|+.||.|++||+.+++.+..+.    ...|.++.|+|+   +++++.|+.+++|+...           
T Consensus        43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~-----------  104 (343)
T 3lrv_A           43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT----TPNPRTGGEHPA---IISRGPCNRLLLLYPGN-----------  104 (343)
T ss_dssp             SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE----EECCCTTCCCCS---EEEECSTTEEEEEETTT-----------
T ss_pred             hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe----cCCceeeeeCCc---eEEecCCCeEEEEEccC-----------
Confidence            345678899999999999999999998888774    466788888887   99999999999999874           


Q ss_pred             cceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeC--CCCEEEEEeCCCcEEEEcCCCCCc
Q psy15995        359 QVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSP--DRGTVFTGSHDGFITRWNAKTGEN  436 (683)
Q Consensus       359 ~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~w~~~~~~~  436 (683)
                                             .+.+|+............+|..+|.+++|+|  +++++++++.||.|++||+++++.
T Consensus       105 -----------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~  161 (343)
T 3lrv_A          105 -----------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ  161 (343)
T ss_dssp             -----------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE
T ss_pred             -----------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE
Confidence                                   2334555543322223336778999999999  999999999999999999987765


Q ss_pred             ceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceee
Q psy15995        437 DRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVS  516 (683)
Q Consensus       437 ~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  516 (683)
                      .......                                                                         
T Consensus       162 ~~~~~~~-------------------------------------------------------------------------  168 (343)
T 3lrv_A          162 YIVHSAK-------------------------------------------------------------------------  168 (343)
T ss_dssp             EEEECCC-------------------------------------------------------------------------
T ss_pred             EEEEecC-------------------------------------------------------------------------
Confidence            3332111                                                                         


Q ss_pred             eecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccC-cceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCC
Q psy15995        517 SLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLS-PKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPD  595 (683)
Q Consensus       517 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~  595 (683)
                         +...+.+++++|++.+|++|+.||.|++||+.+++.. .....+|..+|++++|+|++.+|++++ ++.|++||+.+
T Consensus       169 ---~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~  244 (343)
T 3lrv_A          169 ---SDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRK  244 (343)
T ss_dssp             ---SSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTS
T ss_pred             ---CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCC
Confidence               1224788999999999999999999999999998876 333334899999999999999999999 45999999998


Q ss_pred             Cccccccc-eeeecccEE--EEEecCCCCeEEEeec-CCcEEEEeCCCCcee
Q psy15995        596 FELAHNKE-WGFHSAKVN--CVAWSPDSALVASGSL-DTTIIIWSLASPAKH  643 (683)
Q Consensus       596 ~~~~~~~~-~~~h~~~v~--~~~~s~d~~~l~~~~~-d~~v~iw~~~~~~~~  643 (683)
                      ++...... +..|...+.  +++|+|++++|++++. |+.|++|++.+....
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~  296 (343)
T 3lrv_A          245 DVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKN  296 (343)
T ss_dssp             STTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCS
T ss_pred             CCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccc
Confidence            87654322 111333444  6999999999999998 999999999766543

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=5e-31  Score=262.18  Aligned_cols=251  Identities=21%  Similarity=0.328  Sum_probs=209.3

Q ss_pred             cccCcccceEEEEECCC-CcEEEEecCCCCEEEEeCCC----------cccccccccccCCCCcccceeeeeecceeeeE
Q psy15995         80 IYTEHSCAVNVAKYSPS-GFYIASGDISGKVRIWDTVN----------KEHILKNEFHPIGGPIKDIGTLLSLTSIRNIL  148 (683)
Q Consensus        80 ~~~~h~~~v~~~~~s~d-~~~las~~~dg~i~iwd~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  148 (683)
                      ...+|.+.|++++|+|+ +++||+++.||.|++||+.+          ...+..+..|              ...+.+++
T Consensus       123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h--------------~~~v~~l~  188 (430)
T 2xyi_A          123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH--------------QKEGYGLS  188 (430)
T ss_dssp             EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC--------------SSCCCCEE
T ss_pred             EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCC--------------CCCeEEEE
Confidence            35579999999999997 78999999999999999976          2333333333              26789999


Q ss_pred             eeccce-EEEeecCCccEEEEecccccee-----eeccccccCCCeeEEEEcC-CCCeEEEEecCCceEEEEEEccCC--
Q psy15995        149 VLSIGF-YIASGDISGKVRIWDTVNKEHI-----LKNEFHPIGGPIKDIAWSP-DNQRMVVVGEGRERFGHVFMSETG--  219 (683)
Q Consensus       149 ~s~~~~-~l~~~~~d~~i~iwd~~~~~~~-----~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~~~~~~~~~~~~~~~--  219 (683)
                      |+|++. +|++++.||.|++||+.++...     ....+..|...|.+++|+| ++..+++++.++.  +.+|+..++  
T Consensus       189 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~--i~i~d~~~~~~  266 (430)
T 2xyi_A          189 WNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQK--LMIWDTRNNNT  266 (430)
T ss_dssp             ECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSE--EEEEETTCSCS
T ss_pred             eCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCe--EEEEECCCCCC
Confidence            999998 9999999999999999874221     1234557788999999999 5566666665543  788998876  


Q ss_pred             -CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC-CceeeeccccccCeEEEEECCCCC-EEEEEcCCCcE
Q psy15995        220 -TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP-FKFKMTKQEHSRFVQAVRYSPSGS-HFASAGFDGKV  296 (683)
Q Consensus       220 -~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i  296 (683)
                       +.+..+..|...|++++|+|++++++++++.||.|++||++. .+.+..+..|...|.+++|+|+++ +|++++.||.|
T Consensus       267 ~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i  346 (430)
T 2xyi_A          267 SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL  346 (430)
T ss_dssp             SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCC
T ss_pred             CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcE
Confidence             577788899999999999999987799999999999999987 556778888999999999999995 79999999999


Q ss_pred             EEEeCCC--------------CeeEEeccCCccccCeEEEEEccCCC-EEEEEECCCcEEEEECCCC
Q psy15995        297 FLYDGAS--------------ADLVSELGNPAHKGGVYAVAWKPDGT-QLLTASGDKTCKLWDIETK  348 (683)
Q Consensus       297 ~iw~~~~--------------~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~  348 (683)
                      ++||+..              .+.+..+..  |...|.+++|+|+++ ++++++.||.|++|++...
T Consensus       347 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          347 HVWDLSKIGEEQSTEDAEDGPPELLFIHGG--HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             EEEEGGGTTCCCCHHHHHHCCTTEEEECCC--CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred             EEEeCCCCccccCccccccCCcceEEEcCC--CCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence            9999986              244555543  889999999999999 8999999999999998754

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.5e-31  Score=256.15  Aligned_cols=277  Identities=13%  Similarity=0.048  Sum_probs=219.8

Q ss_pred             EEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEec
Q psy15995         91 AKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDT  170 (683)
Q Consensus        91 ~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~  170 (683)
                      ..+.+|+++|++|+.||.|++||+.+++.+..+.                ...+..+.++|+   +++++.|++|++|+.
T Consensus        42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----------------~~~v~~~~~~~~---~~s~s~D~~i~~w~~  102 (343)
T 3lrv_A           42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT----------------TPNPRTGGEHPA---IISRGPCNRLLLLYP  102 (343)
T ss_dssp             SSSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE----------------EECCCTTCCCCS---EEEECSTTEEEEEET
T ss_pred             hhhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe----------------cCCceeeeeCCc---eEEecCCCeEEEEEc
Confidence            3455788999999999999999999987776654                155778888888   999999999999997


Q ss_pred             cccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeee-cCCcCeEEEEeec--CCCeEEEE
Q psy15995        171 VNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS-GQSKPINSCDFKP--SRPFRIIT  247 (683)
Q Consensus       171 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~~l~~  247 (683)
                      ...                                     ..+|+..+++.+..+. +|...|.+++|+|  ++++ +++
T Consensus       103 ~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~s  144 (343)
T 3lrv_A          103 GNQ-------------------------------------ITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEY-FIW  144 (343)
T ss_dssp             TTE-------------------------------------EEEEETTTCCEEEEEECCCSSCEEEEECCC---CCE-EEE
T ss_pred             cCc-------------------------------------eEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCE-EEE
Confidence            641                                     3445555555444443 6778999999999  8885 999


Q ss_pred             eeCCCeEEEEcCCCCceeeecc-ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeE-EeccCCccccCeEEEEEc
Q psy15995        248 GSEDNTIAVFEGPPFKFKMTKQ-EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLV-SELGNPAHKGGVYAVAWK  325 (683)
Q Consensus       248 ~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~-~~~~~~~~~~~i~~~~~~  325 (683)
                      ++.||+|++||+++++...... .|...+.+++|+|++.+|++|+.||.|++||+++++.. ..+.. .|..+|.+++|+
T Consensus       145 ~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~-~h~~~v~~l~fs  223 (343)
T 3lrv_A          145 ADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV-DEEAKIKEVKFA  223 (343)
T ss_dssp             EETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC-CTTSCEEEEEEC
T ss_pred             EeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec-cCCCCEEEEEEe
Confidence            9999999999999998876653 45568999999999999999999999999999999877 55542 388999999999


Q ss_pred             cCCCEEEEEECCCcEEEEECCCCceeeEEEec--Cccee--ceEEEEecCCEEEEEec-CCcEEEEecCCCCcceeeeee
Q psy15995        326 PDGTQLLTASGDKTCKLWDIETKSVVSEFIMG--NQVED--QQVSCLWQGDYLLTVSL-SGFISYLDVNNPSTPIRVIKG  400 (683)
Q Consensus       326 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~l~~~~~-~g~i~~~~~~~~~~~~~~~~~  400 (683)
                      |++.+|++++ ++.|++||+++++....+...  +....  ..+.++|+++++++++. ++.+++|+..........   
T Consensus       224 ~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~---  299 (343)
T 3lrv_A          224 DNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK---  299 (343)
T ss_dssp             TTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE---
T ss_pred             CCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe---
Confidence            9999999999 459999999988765443221  11111  35888899999999998 999999999765443222   


Q ss_pred             ccccEEEEEEeC---CCCEEEEEeCCCcEEEEcC
Q psy15995        401 HNKPITALALSP---DRGTVFTGSHDGFITRWNA  431 (683)
Q Consensus       401 ~~~~v~~~~~~~---~~~~l~~~~~dg~i~~w~~  431 (683)
                        .++..++|.+   +.+.+++++.|+.+.++-.
T Consensus       300 --~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~  331 (343)
T 3lrv_A          300 --DEESALCLQSDTADFTDMDVVCGDGGIAAILK  331 (343)
T ss_dssp             --EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred             --cCceeEecCccccccceeEEEecCCceEEEEe
Confidence              5678888988   8899999999999988753

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=100.00  E-value=1.2e-30  Score=264.11  Aligned_cols=334  Identities=13%  Similarity=0.132  Sum_probs=259.7

Q ss_pred             eeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeC--CCccccccccccc
Q psy15995         51 GGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDT--VNKEHILKNEFHP  127 (683)
Q Consensus        51 ~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~--~~~~~~~~~~~~~  127 (683)
                      +++|+++++++. .++.|.+||..+++++.++..+.. +.+++|||||++|++++.|++|.+||+  .+++.+.++... 
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g-  221 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG-  221 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC-
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC-
Confidence            489999888877 578999999999999988883333 899999999999999999999999999  777666555432 


Q ss_pred             CCCCcccceeeeeecceeeeEeec----cceEEEeecC-CccEEEEeccccceeeeccccc--------c-CCCeeEEEE
Q psy15995        128 IGGPIKDIGTLLSLTSIRNILVLS----IGFYIASGDI-SGKVRIWDTVNKEHILKNEFHP--------I-GGPIKDIAW  193 (683)
Q Consensus       128 ~~~~~~~~~~~~~~~~i~~~~~s~----~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~--------~-~~~i~~~~~  193 (683)
                                    ..+..++|+|    ||++|++++. +++|.+||..+++.+......+        | ...+.++.+
T Consensus       222 --------------~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~  287 (543)
T 1nir_A          222 --------------IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIA  287 (543)
T ss_dssp             --------------SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEE
T ss_pred             --------------CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEE
Confidence                          5678999999    9999999885 8999999999988766554322        1 237899999


Q ss_pred             cCCCCeEEEEecCCceEEEEEEccCCCcee--eeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc-
Q psy15995        194 SPDNQRMVVVGEGRERFGHVFMSETGTSVG--EISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE-  270 (683)
Q Consensus       194 s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-  270 (683)
                      +|++..+++...... .+.+++..+.+.+.  .+ .+...+..+.|+|+++++++++..+++|.+||..++++...+.. 
T Consensus       288 s~~~~~~~vs~~~~g-~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g  365 (543)
T 1nir_A          288 SHEHPEFIVNVKETG-KVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVG  365 (543)
T ss_dssp             CSSSSEEEEEETTTT-EEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred             CCCCCEEEEEECCCC-eEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccC
Confidence            999888777665443 36777777655443  33 35677889999999998666777799999999999998887763 


Q ss_pred             ---cccCeEEEEECCC-CCEEEEEc-CCCcEEEEeCCC-------CeeEEeccCCccccCeEEEEEccCCCEEEEEE---
Q psy15995        271 ---HSRFVQAVRYSPS-GSHFASAG-FDGKVFLYDGAS-------ADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS---  335 (683)
Q Consensus       271 ---~~~~v~~~~~~~~-~~~l~~~~-~dg~i~iw~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---  335 (683)
                         |......+ ++|+ +..++++. .|++|.+||..+       .+.++.+..  |...+..++++|++++|++++   
T Consensus       366 ~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~--~g~~~~~v~~~pdg~~l~v~~~~~  442 (543)
T 1nir_A          366 KTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG--QGGGSLFIKTHPKSSHLYVDTTFN  442 (543)
T ss_dssp             SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC--SCSCCCCEECCTTCCEEEECCTTC
T ss_pred             CCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc--CCCCceEEEcCCCCCcEEEecCCC
Confidence               55444443 4677 55666665 579999999988       888888876  777889999999999999987   


Q ss_pred             ----CCCcEEEEECCCCceeeE-EEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEE
Q psy15995        336 ----GDKTCKLWDIETKSVVSE-FIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALAL  410 (683)
Q Consensus       336 ----~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~  410 (683)
                          .+++|.+||+.+++...+ +....                                    ..-+..+...+..+.|
T Consensus       443 ~~~~~~~~v~v~d~~~~~~~~~~~~v~~------------------------------------~~~~~~~~~~~~~~~~  486 (543)
T 1nir_A          443 PDARISQSVAVFDLKNLDAKYQVLPIAE------------------------------------WADLGEGAKRVVQPEY  486 (543)
T ss_dssp             SSHHHHTCEEEEETTCTTSCCEEECHHH------------------------------------HHCCCSSCCEEEEEEE
T ss_pred             CCcccCceEEEEECCCCCCCeEEeechh------------------------------------hcccCCCCCceEeccC
Confidence                267999999998875422 11000                                    0012335677899999


Q ss_pred             eCCCCEEEEEe-----CCCcEEEEcCCCCCcceecc
Q psy15995        411 SPDRGTVFTGS-----HDGFITRWNAKTGENDRVQG  441 (683)
Q Consensus       411 ~~~~~~l~~~~-----~dg~i~~w~~~~~~~~~~~~  441 (683)
                      +|+|+.++++.     .++.|.+||..+++......
T Consensus       487 ~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~  522 (543)
T 1nir_A          487 NKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK  522 (543)
T ss_dssp             CSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred             CCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeec
Confidence            99999998663     47999999999998877664

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-31  Score=282.95  Aligned_cols=257  Identities=20%  Similarity=0.265  Sum_probs=210.7

Q ss_pred             eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC--CCceeeeccccccCeEEEEECCC--CCEEEEEcCCCcEEE
Q psy15995        223 GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP--PFKFKMTKQEHSRFVQAVRYSPS--GSHFASAGFDGKVFL  298 (683)
Q Consensus       223 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i  298 (683)
                      ..+.+|.+.|++++|+|++++ +++++.||.|++||..  +++....+.+|...|.+++|+|+  +++|++++.||.|++
T Consensus         3 ~~l~gH~~~V~~l~~s~dg~~-latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v   81 (753)
T 3jro_A            3 VIANAHNELIHDAVLDYYGKR-LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI   81 (753)
T ss_dssp             -----CCCCEEEECCCSSSCC-EEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred             eecccCcceeEEEEECCCCCe-EEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence            457899999999999999995 9999999999999987  56777888999999999999998  899999999999999


Q ss_pred             EeCCCCe--eEEeccCCccccCeEEEEEccC--CCEEEEEECCCcEEEEECCCCceee-EEEecCcceeceEEEEe----
Q psy15995        299 YDGASAD--LVSELGNPAHKGGVYAVAWKPD--GTQLLTASGDKTCKLWDIETKSVVS-EFIMGNQVEDQQVSCLW----  369 (683)
Q Consensus       299 w~~~~~~--~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~----  369 (683)
                      ||+.+++  ....+.  .|...|.+++|+|+  ++.+++++.||.|++||++++.... .....+......+.++|    
T Consensus        82 wd~~~~~~~~~~~~~--~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~  159 (753)
T 3jro_A           82 WKEENGRWSQIAVHA--VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE  159 (753)
T ss_dssp             EEEETTEEEEEEEEC--CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--
T ss_pred             EECCCCccccccccc--CCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc
Confidence            9999987  444554  49999999999999  9999999999999999999874332 22344566677788887    


Q ss_pred             ---------cCCEEEEEecCCcEEEEecCCCC---cceeeeeeccccEEEEEEeCC---CCEEEEEeCCCcEEEEcCCCC
Q psy15995        370 ---------QGDYLLTVSLSGFISYLDVNNPS---TPIRVIKGHNKPITALALSPD---RGTVFTGSHDGFITRWNAKTG  434 (683)
Q Consensus       370 ---------~~~~l~~~~~~g~i~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~~w~~~~~  434 (683)
                               ++..+++++.+|.|++||+....   .....+.+|...|++++|+|+   ++++++++.||.|++||+.++
T Consensus       160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~  239 (753)
T 3jro_A          160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE  239 (753)
T ss_dssp             -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred             cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence                     58999999999999999998754   345567789999999999999   899999999999999999876


Q ss_pred             CcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCce
Q psy15995        435 ENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAK  514 (683)
Q Consensus       435 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (683)
                      ........                                                                        
T Consensus       240 ~~~~~~~~------------------------------------------------------------------------  247 (753)
T 3jro_A          240 QGPWKKTL------------------------------------------------------------------------  247 (753)
T ss_dssp             SSCCBCCB------------------------------------------------------------------------
T ss_pred             CCcceeEE------------------------------------------------------------------------
Confidence            43211100                                                                        


Q ss_pred             eeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCc
Q psy15995        515 VSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKS  554 (683)
Q Consensus       515 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~  554 (683)
                      .....+...+.+++++|+++++++++.||.|++|++....
T Consensus       248 ~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~  287 (753)
T 3jro_A          248 LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG  287 (753)
T ss_dssp             SSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred             eccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence            0001133467889999999999999999999999998643

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.97  E-value=1.1e-29  Score=252.39  Aligned_cols=267  Identities=14%  Similarity=0.236  Sum_probs=213.3

Q ss_pred             cceeeeeecceeeeEeecc-ceEEEeecCCccEEEEeccc--------cceeeeccccccCCCeeEEEEcCCCC-eEEEE
Q psy15995        134 DIGTLLSLTSIRNILVLSI-GFYIASGDISGKVRIWDTVN--------KEHILKNEFHPIGGPIKDIAWSPDNQ-RMVVV  203 (683)
Q Consensus       134 ~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iwd~~~--------~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~  203 (683)
                      ......+...|.+++|+|+ +.+||+++.+|.|++||+.+        ++......+..|...+.+++|+|++. +++++
T Consensus       121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~  200 (430)
T 2xyi_A          121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA  200 (430)
T ss_dssp             EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred             EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence            3445666788999999997 78999999999999999986        22233455667889999999999998 77777


Q ss_pred             ecCCceEEEEEEccCCCc-------eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC---ceeeecccccc
Q psy15995        204 GEGRERFGHVFMSETGTS-------VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF---KFKMTKQEHSR  273 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~  273 (683)
                      +.++.  +.+|+...+..       ...+.+|...|.+++|+|++...+++++.|+.|++||+++.   +....+..|..
T Consensus       201 ~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~  278 (430)
T 2xyi_A          201 SDDHT--ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA  278 (430)
T ss_dssp             CTTSC--EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred             eCCCe--EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCC
Confidence            66544  78899887432       45567899999999999966557999999999999999877   56677778999


Q ss_pred             CeEEEEECCCCC-EEEEEcCCCcEEEEeCCC-CeeEEeccCCccccCeEEEEEccCCC-EEEEEECCCcEEEEECCCCce
Q psy15995        274 FVQAVRYSPSGS-HFASAGFDGKVFLYDGAS-ADLVSELGNPAHKGGVYAVAWKPDGT-QLLTASGDKTCKLWDIETKSV  350 (683)
Q Consensus       274 ~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~  350 (683)
                      .|++++|+|+++ ++++++.||.|++||+++ ...+..+..  |...|.+++|+|+++ +|++++.|+.|++||+.....
T Consensus       279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~--h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~  356 (430)
T 2xyi_A          279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE  356 (430)
T ss_dssp             CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC--CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTC
T ss_pred             CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec--CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcc
Confidence            999999999987 788999999999999988 456666654  899999999999985 689999999999999986432


Q ss_pred             eeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCC-EEEEEeCCCcEEEE
Q psy15995        351 VSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRG-TVFTGSHDGFITRW  429 (683)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~w  429 (683)
                      ........                              ......+....+|...|++++|+|+++ ++++++.||.|++|
T Consensus       357 ~~~~~~~~------------------------------~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw  406 (430)
T 2xyi_A          357 EQSTEDAE------------------------------DGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVW  406 (430)
T ss_dssp             CCCHHHHH------------------------------HCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred             ccCccccc------------------------------cCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEe
Confidence            11000000                              000123345567899999999999999 89999999999999


Q ss_pred             cCCCC
Q psy15995        430 NAKTG  434 (683)
Q Consensus       430 ~~~~~  434 (683)
                      ++...
T Consensus       407 ~~~~~  411 (430)
T 2xyi_A          407 QMAEN  411 (430)
T ss_dssp             EECHH
T ss_pred             Ecccc
Confidence            98754

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.97  E-value=6.9e-30  Score=231.59  Aligned_cols=271  Identities=11%  Similarity=0.052  Sum_probs=197.8

Q ss_pred             EEEEeeCCCeEEEEcCCCC---ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeE
Q psy15995        244 RIITGSEDNTIAVFEGPPF---KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVY  320 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~  320 (683)
                      .++++++ ..|++|+..+.   +.+++...|+.+|..+.+.||..-|++..- |                .  -+...|.
T Consensus        56 ~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~----------------~--~~~~~v~  115 (356)
T 2w18_A           56 CIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVAL-G----------------N--LEIREIR  115 (356)
T ss_dssp             EEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEE-C----------------S--SSEEEEE
T ss_pred             EEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeee-c----------------c--ccccceE
Confidence            4666665 78999998888   889999999999999999998654443321 1                1  1667889


Q ss_pred             EEEEccC----CCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEe--cCCcEEEEecCCCCcc
Q psy15995        321 AVAWKPD----GTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVS--LSGFISYLDVNNPSTP  394 (683)
Q Consensus       321 ~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~g~i~~~~~~~~~~~  394 (683)
                      .++++||    ++.+++++.+  +++|++.+++.                       +.++.  .++.|++|++....+.
T Consensus       116 sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~l-----------------------v~ss~~g~d~~V~~~~~s~dG~~  170 (356)
T 2w18_A          116 ALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRL-----------------------VSSSGTLSDQQVEVMTFAEDGGG  170 (356)
T ss_dssp             EECC------CCEEEEEEEEE--EEEEEETTTEE-----------------------EEEESSSTTCEEEEEEECTTSCE
T ss_pred             EEEECCCccccccEEEeCCCe--EEEEecCCCcE-----------------------EEecccCCCCcEEEEEECCCCce
Confidence            9999999    9999998754  78887754433                       22322  4899999999776777


Q ss_pred             eeeeeeccccEEEEEEeC---CCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEe
Q psy15995        395 IRVIKGHNKPITALALSP---DRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVD  471 (683)
Q Consensus       395 ~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~  471 (683)
                      +..+.+|...++.++|+|   ++..|++++.|++|++||+.+++....+...+. .+.                      
T Consensus       171 ~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~-~v~----------------------  227 (356)
T 2w18_A          171 KENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS-YQA----------------------  227 (356)
T ss_dssp             EEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC----C----------------------
T ss_pred             eeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc-cee----------------------
Confidence            778889999999999999   789999999999999999999998777642221 110                      


Q ss_pred             CCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCE------------EEEE
Q psy15995        472 LSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGL------------VAVG  539 (683)
Q Consensus       472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------l~~~  539 (683)
                                                                         .+.+++|+|++.+            +++|
T Consensus       228 ---------------------------------------------------~v~~vafSpdG~~lvs~s~~~~~w~laSG  256 (356)
T 2w18_A          228 ---------------------------------------------------SVCHKAYSEMGLLFIVLSHPCAKESESLR  256 (356)
T ss_dssp             ---------------------------------------------------CCEEEEEEETTEEEEEEC-----------
T ss_pred             ---------------------------------------------------eeEEEEECCCCCEEEEeccCCCcceeecc
Confidence                                                               1233344444443            4678


Q ss_pred             cCCCcEEEEEcCCCccCccee----ecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEE-EE
Q psy15995        540 GADSKVHIYELNNKSLSPKAE----LDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVN-CV  614 (683)
Q Consensus       540 ~~dg~i~i~d~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~-~~  614 (683)
                      +.|++|++||..+++......    .+|...+.+..+  ++.++|+++.|++|+|||+.+++++....  +|...+. ++
T Consensus       257 s~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~--gH~~~vvs~v  332 (356)
T 2w18_A          257 SPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLP--PVSDQHWSFV  332 (356)
T ss_dssp             -CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEEC--CC--CCCCEE
T ss_pred             CCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEec--CCCCCeEEEE
Confidence            889999999999887653322    234444444444  47899999999999999999999876543  3766554 68


Q ss_pred             EecCCCCeEEEeecCCcEEEEeC
Q psy15995        615 AWSPDSALVASGSLDTTIIIWSL  637 (683)
Q Consensus       615 ~~s~d~~~l~~~~~d~~v~iw~~  637 (683)
                      +|||||++|++|+.|++|+|||+
T Consensus       333 afSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          333 KWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             EECSSSSEEEEECTTSCEEEEEE
T ss_pred             EECCCCCEEEEEECCCcEEEecC
Confidence            99999999999999999999995

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.97  E-value=5.1e-30  Score=251.22  Aligned_cols=283  Identities=11%  Similarity=0.082  Sum_probs=180.7

Q ss_pred             CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee-----eeccccccCeEEEEECC--------CCCEEEEEcCCC
Q psy15995        228 QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK-----MTKQEHSRFVQAVRYSP--------SGSHFASAGFDG  294 (683)
Q Consensus       228 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~~~~~dg  294 (683)
                      |........+.+++. .+++++.|++|++||.+.++..     ..+.+|.+.|.+++|+|        |+++||+++.|+
T Consensus        88 ~~~~~~~~~~~~~~~-~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~  166 (393)
T 4gq1_A           88 HDGDGNVNSSPVYSL-FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC  166 (393)
T ss_dssp             ---------CCEEEE-EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred             cCCCcceeecCCCCC-EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence            444444555566665 5999999999999998887543     35689999999999998        788999999999


Q ss_pred             cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCC-EEEEEECCCcEEEEECCCCceeeEEEecCcc-eeceEEEEecCC
Q psy15995        295 KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGT-QLLTASGDKTCKLWDIETKSVVSEFIMGNQV-EDQQVSCLWQGD  372 (683)
Q Consensus       295 ~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  372 (683)
                      +|++||+.++.....+..  |...+.+++|+|++. +|++++.|+.|++||+++++........... .........   
T Consensus       167 tv~~Wd~~~~~~~~~~~~--~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~---  241 (393)
T 4gq1_A          167 TLIIWRLTDEGPILAGYP--LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNT---  241 (393)
T ss_dssp             EEEEEEEETTEEEEEEEE--CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEES---
T ss_pred             eEEEEECCCCceeeeecC--CCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccc---
Confidence            999999988877766654  889999999999874 7999999999999999988765443221111 000111100   


Q ss_pred             EEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEe-CCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEE
Q psy15995        373 YLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALS-PDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGM  451 (683)
Q Consensus       373 ~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~  451 (683)
                             ..          ........+|...+.++.|+ |+++.+++++.|+.+++||+..++....+ ..+...+..+
T Consensus       242 -------~~----------~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l-~~~~~~~~~~  303 (393)
T 4gq1_A          242 -------LP----------LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEI-SDSTMKLGPK  303 (393)
T ss_dssp             -------GG----------GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------
T ss_pred             -------cc----------ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceE-eeecCccccE
Confidence                   00          01112235688889999987 79999999999999999999877654443 2222222221


Q ss_pred             EEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEcc
Q psy15995        452 KATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDH  531 (683)
Q Consensus       452 ~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  531 (683)
                      .+..+.                                                          .............++|
T Consensus       304 ~~~~~~----------------------------------------------------------~~~~~~~~~~~~~~~~  325 (393)
T 4gq1_A          304 NLLPNV----------------------------------------------------------QGISLFPSLLGACPHP  325 (393)
T ss_dssp             CCSCSE----------------------------------------------------------EEECSSCCSSCCEECS
T ss_pred             EEcccc----------------------------------------------------------ccccccCcceeEEEcc
Confidence            111000                                                          0000011112223333


Q ss_pred             --CCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECC
Q psy15995        532 --EHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVP  594 (683)
Q Consensus       532 --~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~  594 (683)
                        ++.++++|+.||.|++||..+++... ....|..+|.+++|+|||++||+++++| +.+|.+.
T Consensus       326 ~~~~~~~~sgs~Dg~V~lwd~~~~~~~~-~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~  388 (393)
T 4gq1_A          326 RYMDYFATAHSQHGLIQLINTYEKDSNS-IPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM  388 (393)
T ss_dssp             SCTTEEEEEETTTTEEEEEETTCTTCCE-EEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred             CCCCEEEEEECCCCEEEEEECCCCcEEE-EecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence              45567788899999999999887663 3456888999999999999999998766 6666653

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.97  E-value=1.9e-28  Score=248.06  Aligned_cols=332  Identities=11%  Similarity=0.077  Sum_probs=252.4

Q ss_pred             eecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeC--CCCeeEEeccCCc
Q psy15995        237 FKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDG--ASADLVSELGNPA  314 (683)
Q Consensus       237 ~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~--~~~~~~~~~~~~~  314 (683)
                      ++|++. .+++++.|++|.+||..+++.+..+..+.. +..++|+|+|++|++++.|+.|.+||+  .+++.+..+.   
T Consensus       145 ~~p~~~-~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~---  219 (543)
T 1nir_A          145 LDLPNL-FSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK---  219 (543)
T ss_dssp             CCGGGE-EEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE---
T ss_pred             cCCCCE-EEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe---
Confidence            788776 588999999999999999999888874333 889999999999999999999999999  8888888876   


Q ss_pred             cccCeEEEEEcc----CCCEEEEEEC-CCcEEEEECCCCceeeEEEecC----------cceeceEEEEecCC-EEEEEe
Q psy15995        315 HKGGVYAVAWKP----DGTQLLTASG-DKTCKLWDIETKSVVSEFIMGN----------QVEDQQVSCLWQGD-YLLTVS  378 (683)
Q Consensus       315 ~~~~i~~~~~~~----~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~-~l~~~~  378 (683)
                      +...+..++|+|    |++++++++. ++.|.+||..+++.+..+....          ......+.+++++. ++++..
T Consensus       220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~  299 (543)
T 1nir_A          220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK  299 (543)
T ss_dssp             CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred             cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence            455689999999    9999999885 8999999999999988876521          12345667777655 456666


Q ss_pred             cCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEE-eCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCe
Q psy15995        379 LSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTG-SHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGEL  457 (683)
Q Consensus       379 ~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~  457 (683)
                      .++.|.+||.............+...+..+.|+|++++++++ ..++.|.+||+.+++.......+.             
T Consensus       300 ~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~-------------  366 (543)
T 1nir_A          300 ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGK-------------  366 (543)
T ss_dssp             TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS-------------
T ss_pred             CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCC-------------
Confidence            789999999987544332223456678889999999987655 458899999999887654432110             


Q ss_pred             EEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccC-CCEE
Q psy15995        458 LYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHE-HGLV  536 (683)
Q Consensus       458 l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l  536 (683)
                                                                                  .++......+ ++|+ +.++
T Consensus       367 ------------------------------------------------------------~ph~g~g~~~-~~p~~g~~~  385 (543)
T 1nir_A          367 ------------------------------------------------------------TPHPGRGANF-VHPKYGPVW  385 (543)
T ss_dssp             ------------------------------------------------------------SBCCTTCEEE-EETTTEEEE
T ss_pred             ------------------------------------------------------------CCCCCCCccc-CCCCCccEE
Confidence                                                                        0111111122 3566 5566


Q ss_pred             EEEc-CCCcEEEEEcCC-------CccCcceeecCCcCeeEEEECCCCCEEEEEe-------CCCeEEEEECCCCccccc
Q psy15995        537 AVGG-ADSKVHIYELNN-------KSLSPKAELDHLGPVTDCSFSPSNEYLVASD-------AHRKVVLYRVPDFELAHN  601 (683)
Q Consensus       537 ~~~~-~dg~i~i~d~~~-------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------~d~~i~i~~~~~~~~~~~  601 (683)
                      +++. .|++|.+||..+       .+.+.... .|...+..++|+||+++|++++       .+++|.+||+.+++....
T Consensus       386 ~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~-~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~  464 (543)
T 1nir_A          386 STSHLGDGSISLIGTDPKNHPQYAWKKVAELQ-GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQ  464 (543)
T ss_dssp             EEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE-CSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCE
T ss_pred             EeccCCCceEEEEEeCCCCCchhcCeEEEEEE-cCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeE
Confidence            6665 579999999987       44432222 3667788999999999999987       267999999999886522


Q ss_pred             cc-------eeeecccEEEEEecCCCCeEEEee-----cCCcEEEEeCCCCceeeEeec
Q psy15995        602 KE-------WGFHSAKVNCVAWSPDSALVASGS-----LDTTIIIWSLASPAKHIIIKN  648 (683)
Q Consensus       602 ~~-------~~~h~~~v~~~~~s~d~~~l~~~~-----~d~~v~iw~~~~~~~~~~~~~  648 (683)
                      ..       ...+...+..++|+|||+.|+++.     .|+.|.|||..++++..+++.
T Consensus       465 ~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~  523 (543)
T 1nir_A          465 VLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKD  523 (543)
T ss_dssp             EECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred             EeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecC
Confidence            21       112567899999999999988763     479999999999999888864

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.97  E-value=2.7e-30  Score=253.13  Aligned_cols=258  Identities=14%  Similarity=0.089  Sum_probs=181.3

Q ss_pred             eeeEeeccceEEEeecCCccEEEEeccccceee---eccccccCCCeeEEEEcC--------CCCeEEEEecCCceEEEE
Q psy15995        145 RNILVLSIGFYIASGDISGKVRIWDTVNKEHIL---KNEFHPIGGPIKDIAWSP--------DNQRMVVVGEGRERFGHV  213 (683)
Q Consensus       145 ~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~i~~~~~s~--------~~~~l~~~~~~~~~~~~~  213 (683)
                      ....+++++.+||+++.|++|++||..+++...   ...+.+|.+.|.+++|+|        |+++|++++.++.  +++
T Consensus        93 ~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t--v~~  170 (393)
T 4gq1_A           93 NVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT--LII  170 (393)
T ss_dssp             ----CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE--EEE
T ss_pred             ceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe--EEE
Confidence            344677788999999999999999999876532   234678999999999998        8899999998764  789


Q ss_pred             EEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeee-------------------------c
Q psy15995        214 FMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT-------------------------K  268 (683)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~-------------------------~  268 (683)
                      |+..++..+..+.+|...|.+++|+|++..+|++++.|++|++||+.+++....                         .
T Consensus       171 Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  250 (393)
T 4gq1_A          171 WRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHS  250 (393)
T ss_dssp             EEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-----
T ss_pred             EECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeec
Confidence            999999999999999999999999999876799999999999999887654322                         2


Q ss_pred             cccccCeEEEEEC-CCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCC
Q psy15995        269 QEHSRFVQAVRYS-PSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIET  347 (683)
Q Consensus       269 ~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  347 (683)
                      .+|...+.++.|+ |+++.+++++.|+.+++||+..++....+..  |...+..+.+.|+.+.+...........+    
T Consensus       251 ~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  324 (393)
T 4gq1_A          251 SGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISD--STMKLGPKNLLPNVQGISLFPSLLGACPH----  324 (393)
T ss_dssp             -CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------------CCSCSEEEECSSCCSSCCEEC----
T ss_pred             ccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEee--ecCccccEEEccccccccccCcceeEEEc----
Confidence            3577788899986 7999999999999999999998887777654  76777777777664332211111000000    


Q ss_pred             CceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEE
Q psy15995        348 KSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFIT  427 (683)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  427 (683)
                                         ...++.++++++.+|.|++||...+. .......|..+|.+++|+|||++||+++.+| +.
T Consensus       325 -------------------~~~~~~~~~sgs~Dg~V~lwd~~~~~-~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~  383 (393)
T 4gq1_A          325 -------------------PRYMDYFATAHSQHGLIQLINTYEKD-SNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VL  383 (393)
T ss_dssp             -------------------SSCTTEEEEEETTTTEEEEEETTCTT-CCEEEEECSSCEEEEEECTTSSEEEEEESSE-EE
T ss_pred             -------------------cCCCCEEEEEECCCCEEEEEECCCCc-EEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eE
Confidence                               01133456667778888888887744 4455667889999999999999999998776 55


Q ss_pred             EEcC
Q psy15995        428 RWNA  431 (683)
Q Consensus       428 ~w~~  431 (683)
                      +|.+
T Consensus       384 lvrL  387 (393)
T 4gq1_A          384 LTRL  387 (393)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5543

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.96  E-value=6.2e-28  Score=237.45  Aligned_cols=300  Identities=11%  Similarity=0.103  Sum_probs=226.6

Q ss_pred             CcCeEEEEeecCCCeEEEEee----CCC----eEEEEcC--CCCcee--eeccccccCeEEEEECC--------------
Q psy15995        229 SKPINSCDFKPSRPFRIITGS----EDN----TIAVFEG--PPFKFK--MTKQEHSRFVQAVRYSP--------------  282 (683)
Q Consensus       229 ~~~v~~~~~~~~~~~~l~~~~----~d~----~i~iw~~--~~~~~~--~~~~~~~~~v~~~~~~~--------------  282 (683)
                      ...+....|.+.+...+++|+    .+|    .+++||+  .+++.+  ..+.+|...+..+++++              
T Consensus        62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~  141 (415)
T 2hqs_A           62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA  141 (415)
T ss_dssp             GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence            346777888888876677776    467    8999999  888877  45778888888777765              


Q ss_pred             CCCEEEEEcCC------CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC---cEEEEECCCCceeeE
Q psy15995        283 SGSHFASAGFD------GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK---TCKLWDIETKSVVSE  353 (683)
Q Consensus       283 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~  353 (683)
                      .+..++.++.+      +.|++||...+. ...+..  |...+.+++|+||+++|++++.++   .|++||+.+++..  
T Consensus       142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~~l~~--~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~--  216 (415)
T 2hqs_A          142 FRTRIAYVVQTNGGQFPYELRVSDYDGYN-QFVVHR--SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR--  216 (415)
T ss_dssp             TTCEEEEEEECSSSSCCEEEEEEETTSCS-CEEEEE--ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE--
T ss_pred             CCCEEEEEEecCCCCccceEEEEcCCCCC-CEEEeC--CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE--
Confidence            15566666554      799999987544 444443  888999999999999999999875   8999999887642  


Q ss_pred             EEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEE-EEeCCCc--EEEEc
Q psy15995        354 FIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVF-TGSHDGF--ITRWN  430 (683)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~~w~  430 (683)
                                                                 .+..|...+.+++|+|||+.|+ +++.++.  |++||
T Consensus       217 -------------------------------------------~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d  253 (415)
T 2hqs_A          217 -------------------------------------------QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMD  253 (415)
T ss_dssp             -------------------------------------------EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             -------------------------------------------EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEE
Confidence                                                       1234567889999999999888 6666654  88889


Q ss_pred             CCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEe
Q psy15995        431 AKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVE  510 (683)
Q Consensus       431 ~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (683)
                      +.+++.....  .+                                                                  
T Consensus       254 ~~~~~~~~l~--~~------------------------------------------------------------------  265 (415)
T 2hqs_A          254 LASGQIRQVT--DG------------------------------------------------------------------  265 (415)
T ss_dssp             TTTCCEEECC--CC------------------------------------------------------------------
T ss_pred             CCCCCEEeCc--CC------------------------------------------------------------------
Confidence            8776542221  11                                                                  


Q ss_pred             CCceeeeecCCCCCcEEEEccCCCEEEEEcC-CC--cEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCC--
Q psy15995        511 NGAKVSSLPIDYEPSSISLDHEHGLVAVGGA-DS--KVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAH--  585 (683)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--  585 (683)
                                ...+.+++|+||+++|++++. ++  .|++||+.+++..  ....+...+.+++|+|||++|++++.+  
T Consensus       266 ----------~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~--~l~~~~~~~~~~~~spdG~~l~~~~~~~g  333 (415)
T 2hqs_A          266 ----------RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ--RITWEGSQNQDADVSSDGKFMVMVSSNGG  333 (415)
T ss_dssp             ----------SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE--ECCCSSSEEEEEEECTTSSEEEEEEECSS
T ss_pred             ----------CCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE--EEecCCCcccCeEECCCCCEEEEEECcCC
Confidence                      123567889999998888876 44  6777888877643  222356778999999999999988764  


Q ss_pred             -CeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCC---cEEEEeCCCCceeeEeecCCCCCCeeEEEEc
Q psy15995        586 -RKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDT---TIIIWSLASPAKHIIIKNAHPQSQITRLQWL  661 (683)
Q Consensus       586 -~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~---~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~  661 (683)
                       ..|++||+.+++......   |. .+.+++|+|||++|++++.|+   .|++||+.. .....+..  |.+.|.+++|+
T Consensus       334 ~~~i~~~d~~~~~~~~l~~---~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g-~~~~~l~~--~~~~v~~~~~~  406 (415)
T 2hqs_A          334 QQHIAKQDLATGGVQVLSS---TF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG-RFKARLPA--TDGQVKFPAWS  406 (415)
T ss_dssp             CEEEEEEETTTCCEEECCC---SS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTS-CCEEECCC--SSSEEEEEEEC
T ss_pred             ceEEEEEECCCCCEEEecC---CC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC-CcEEEeeC--CCCCCcCCccc
Confidence             689999999887743221   43 899999999999999988887   799999874 44445544  67899999999


Q ss_pred             cC
Q psy15995        662 DN  663 (683)
Q Consensus       662 ~~  663 (683)
                      +.
T Consensus       407 ~~  408 (415)
T 2hqs_A          407 PY  408 (415)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.96  E-value=6.9e-28  Score=237.12  Aligned_cols=279  Identities=11%  Similarity=0.002  Sum_probs=213.8

Q ss_pred             CCeEEEeeCCCCCeEE-Ee-----cCC----eEEEEeC--CCCccc--ccccCcccceEEEEECC--------------C
Q psy15995         45 GQPIVLGGDPKGKNFL-YT-----NGN----SVIIRNI--ENPAIS--DIYTEHSCAVNVAKYSP--------------S   96 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~-~~-----~~~----~i~v~~~--~~~~~~--~~~~~h~~~v~~~~~s~--------------d   96 (683)
                      ..+...+|++.|..++ ++     .+|    .|++||+  .+++.+  ..+.+|...+..+++++              .
T Consensus        63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~  142 (415)
T 2hqs_A           63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF  142 (415)
T ss_dssp             GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred             cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence            3566677888886544 44     256    8999999  888876  45889999998888875              2


Q ss_pred             CcEEEEecCC------CCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCc---cEEE
Q psy15995         97 GFYIASGDIS------GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISG---KVRI  167 (683)
Q Consensus        97 ~~~las~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~---~i~i  167 (683)
                      +.+++.++.+      +.|++||+..+ ....+..+.              ..+.+++|+|||++||+++.++   .|++
T Consensus       143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~~~--------------~~v~~~~~Spdg~~la~~s~~~~~~~i~~  207 (415)
T 2hqs_A          143 RTRIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHRSP--------------QPLMSPAWSPDGSKLAYVTFESGRSALVI  207 (415)
T ss_dssp             TCEEEEEEECSSSSCCEEEEEEETTSC-SCEEEEEES--------------SCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred             CCEEEEEEecCCCCccceEEEEcCCCC-CCEEEeCCC--------------CcceeeEEcCCCCEEEEEEecCCCcEEEE
Confidence            5666665543      68999999754 334443333              6789999999999999998875   9999


Q ss_pred             EeccccceeeeccccccCCCeeEEEEcCCCCeEEEEe-cCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEE
Q psy15995        168 WDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVG-EGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRII  246 (683)
Q Consensus       168 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  246 (683)
                      ||+.+++..   .+..+.+.+.+++|+|||+.|++.+ .+....+.+|+.++++. ..+..|...+.+++|+|+++. |+
T Consensus       208 ~d~~tg~~~---~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~-l~  282 (415)
T 2hqs_A          208 QTLANGAVR---QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQN-LA  282 (415)
T ss_dssp             EETTTCCEE---EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSE-EE
T ss_pred             EECCCCcEE---EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCE-EE
Confidence            999988754   2344567899999999999988554 44444567777777665 677788899999999999996 55


Q ss_pred             EeeC-CC--eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCC---CcEEEEeCCCCeeEEeccCCccccCeE
Q psy15995        247 TGSE-DN--TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD---GKVFLYDGASADLVSELGNPAHKGGVY  320 (683)
Q Consensus       247 ~~~~-d~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~i~  320 (683)
                      +++. ++  .|.+||..+++. ..+..+...+.+++|+|+|++|++++.+   ..|++||+.+++... +..  +. .+.
T Consensus       283 ~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~--~~-~~~  357 (415)
T 2hqs_A          283 FTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSS--TF-LDE  357 (415)
T ss_dssp             EEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCC--SS-SCE
T ss_pred             EEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecC--CC-CcC
Confidence            5554 55  677779887764 3455577789999999999999988764   589999999887743 332  43 899


Q ss_pred             EEEEccCCCEEEEEECCC---cEEEEECCCC
Q psy15995        321 AVAWKPDGTQLLTASGDK---TCKLWDIETK  348 (683)
Q Consensus       321 ~~~~~~~~~~l~~~~~dg---~i~iwd~~~~  348 (683)
                      +++|+|++++|++++.++   .|++||+..+
T Consensus       358 ~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~  388 (415)
T 2hqs_A          358 TPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR  388 (415)
T ss_dssp             EEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred             CeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence            999999999999988776   6888888643

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.96  E-value=1.8e-27  Score=254.72  Aligned_cols=352  Identities=10%  Similarity=-0.001  Sum_probs=244.2

Q ss_pred             CeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCccc---ceEEEEECCCCcEEEEecCC---------CCEEEEe
Q psy15995         46 QPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSC---AVNVAKYSPSGFYIASGDIS---------GKVRIWD  113 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~---~v~~~~~s~d~~~las~~~d---------g~i~iwd  113 (683)
                      .+..++|||||++++.+.++.|.+||+++++....+.+|..   .|.+++|||||++||+++.+         +.|.+||
T Consensus        18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d   97 (723)
T 1xfd_A           18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK   97 (723)
T ss_dssp             CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred             cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence            46678899999988877788999999999998888877765   49999999999999998764         6788999


Q ss_pred             CCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeecccccc---------
Q psy15995        114 TVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPI---------  184 (683)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~---------  184 (683)
                      +.+++. ..+.....           +...+..++|||||++||.++. +.|++||+.+++..........         
T Consensus        98 ~~~~~~-~~l~~~~~-----------~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~  164 (723)
T 1xfd_A           98 IPHGDP-QSLDPPEV-----------SNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSD  164 (723)
T ss_dssp             SSSCCC-EECCCTTC-----------CSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECC
T ss_pred             CCCCce-EeccCCcc-----------ccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccc
Confidence            998865 22221110           0134778999999999999886 7999999998765432221110         


Q ss_pred             -------CCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEE
Q psy15995        185 -------GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVF  257 (683)
Q Consensus       185 -------~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw  257 (683)
                             .+.+.+++|||||+.|+++..+... +.+|......     ..+...+..+.|.++|..     ..+..|++|
T Consensus       165 ~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~G~~-----~~~~~l~~~  233 (723)
T 1xfd_A          165 WLYEEEILKTHIAHWWSPDGTRLAYAAINDSR-VPIMELPTYT-----GSIYPTVKPYHYPKAGSE-----NPSISLHVI  233 (723)
T ss_dssp             HHHHHTTSSSSEEEEECTTSSEEEEEEEECTT-SCEEEECCCS-----SSSSCCCEEEECCBTTSC-----CCEEEEEEE
T ss_pred             eeEEEEeccCcceEEECCCCCEEEEEEECCCc-cceEEeeccC-----CcCCCcceeccCCCCCCC-----CCeeEEEEE
Confidence                   0133789999999999998754322 2233322111     113345788888888752     345689999


Q ss_pred             cCCCCceeeecccc------ccCeEEEEECCCCCEEEEEcC----CCcEEEEeCCCCeeEEeccCCccccCe----EEEE
Q psy15995        258 EGPPFKFKMTKQEH------SRFVQAVRYSPSGSHFASAGF----DGKVFLYDGASADLVSELGNPAHKGGV----YAVA  323 (683)
Q Consensus       258 ~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~i----~~~~  323 (683)
                      |+.+++....+..+      ...+..++|+|||+++++...    +..|++||+.+++....+.. .+...+    ..++
T Consensus       234 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~  312 (723)
T 1xfd_A          234 GLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED-ESEAWLHRQNEEPV  312 (723)
T ss_dssp             ESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE-ECSSCCCCCCCCCE
T ss_pred             ECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe-ccCCEEeccCCCce
Confidence            99888765555543      667999999999998876643    35799999999887665432 122333    3789


Q ss_pred             EccCCCEEEEE--ECCC------cEEEEE-CCCCce--eeEEEecCcceeceEEEEecCCEEEEEecC---CcEEEEecC
Q psy15995        324 WKPDGTQLLTA--SGDK------TCKLWD-IETKSV--VSEFIMGNQVEDQQVSCLWQGDYLLTVSLS---GFISYLDVN  389 (683)
Q Consensus       324 ~~~~~~~l~~~--~~dg------~i~iwd-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---g~i~~~~~~  389 (683)
                      |+|||+.|+..  ..++      .|.+|| ...+..  ...+..........+.++++++.|+..+.+   +.+.+|++.
T Consensus       313 ~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~  392 (723)
T 1xfd_A          313 FSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN  392 (723)
T ss_dssp             ECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred             EcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence            99999987754  4566      577777 344431  333322222222235788999999876665   789999987


Q ss_pred             CCCc-ceeeeee---ccccEEEEEEeCCCCEEEEEeC
Q psy15995        390 NPST-PIRVIKG---HNKPITALALSPDRGTVFTGSH  422 (683)
Q Consensus       390 ~~~~-~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~  422 (683)
                      .... ....+..   |...+..++|+|++++++....
T Consensus       393 ~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~  429 (723)
T 1xfd_A          393 TVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE  429 (723)
T ss_dssp             SSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred             CCCCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence            5332 2233332   5667889999999999886543

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.96  E-value=5.3e-27  Score=251.64  Aligned_cols=336  Identities=10%  Similarity=0.033  Sum_probs=241.4

Q ss_pred             ccceEEEEECCCCcEEEEecC-CC-----CEEEEeCCCcccccccccccCCC---Cccc-------ceeeeeecceeeeE
Q psy15995         85 SCAVNVAKYSPSGFYIASGDI-SG-----KVRIWDTVNKEHILKNEFHPIGG---PIKD-------IGTLLSLTSIRNIL  148 (683)
Q Consensus        85 ~~~v~~~~~s~d~~~las~~~-dg-----~i~iwd~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~i~~~~  148 (683)
                      ...|.+++|||||++||+++. |+     .|.+||+.+++....+..+....   .+..       .........+..++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ  115 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence            557999999999999999987 88     89999999987655554432110   0000       00000013478999


Q ss_pred             eeccceEEEeecCCccEEEEecccc---ceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeee
Q psy15995        149 VLSIGFYIASGDISGKVRIWDTVNK---EHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEI  225 (683)
Q Consensus       149 ~s~~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  225 (683)
                      |+|||++|++++. +.|++||+.++   +.   ..+..+...+..++|+|||++++++..+   .+.+|+.++++.....
T Consensus       116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~---~~l~~~~~~~~~~~~SPDG~~la~~~~~---~i~~~d~~~g~~~~~~  188 (741)
T 2ecf_A          116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAV---RQLTHGEGFATDAKLSPKGGFVSFIRGR---NLWVIDLASGRQMQLT  188 (741)
T ss_dssp             ECTTSSEEEEEET-TEEEEEESSSCSTTSC---CBCCCSSSCEEEEEECTTSSEEEEEETT---EEEEEETTTTEEEECC
T ss_pred             ECCCCCEEEEEeC-CcEEEEECCCCCcceE---EEcccCCcccccccCCCCCCEEEEEeCC---cEEEEecCCCCEEEec
Confidence            9999999999886 99999999987   42   2334456789999999999999998864   3778888777665554


Q ss_pred             ecCCcC----------------eEEEEeecCCCeEEEEeeCCC---------------------------------eEEE
Q psy15995        226 SGQSKP----------------INSCDFKPSRPFRIITGSEDN---------------------------------TIAV  256 (683)
Q Consensus       226 ~~~~~~----------------v~~~~~~~~~~~~l~~~~~d~---------------------------------~i~i  256 (683)
                      ..+...                +..++|+|+++. |++++.|+                                 .|.+
T Consensus       189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~  267 (741)
T 2ecf_A          189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV  267 (741)
T ss_dssp             CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred             cCCccceeccccceeeeeccccccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence            444432                478999999996 77776554                                 7889


Q ss_pred             EcCCC-Cceeeecc--ccccCeEEEEECCCCCEEEEEcC-----CCcEEEEeCCCCeeEEeccCCcccc----CeEEEEE
Q psy15995        257 FEGPP-FKFKMTKQ--EHSRFVQAVRYSPSGSHFASAGF-----DGKVFLYDGASADLVSELGNPAHKG----GVYAVAW  324 (683)
Q Consensus       257 w~~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~----~i~~~~~  324 (683)
                      ||+.+ ++......  .|...+..++| |||+.|++++.     +..|++||+.+++....+..  +..    .+..++|
T Consensus       268 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--~~~~~~~~~~~~~~  344 (741)
T 2ecf_A          268 ISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE--TSPTWVPLHNSLRF  344 (741)
T ss_dssp             ECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE--ECSSCCCCCSCCEE
T ss_pred             EECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc--CCCCcCCcCCceEE
Confidence            99988 77654443  47788999999 99999887654     56799999999987766543  322    4568899


Q ss_pred             ccCCCEEEEEECCCcEEEEECC-CCceeeEEEecCcceeceE-EEEecCCEEEEEec-CC--cEEEEecCCCCcceeeee
Q psy15995        325 KPDGTQLLTASGDKTCKLWDIE-TKSVVSEFIMGNQVEDQQV-SCLWQGDYLLTVSL-SG--FISYLDVNNPSTPIRVIK  399 (683)
Q Consensus       325 ~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~-~g--~i~~~~~~~~~~~~~~~~  399 (683)
                      +||++++++++.+|..++|.+. .++ ...+.. .......+ .++++++.++..+. ++  .+++|++.........+.
T Consensus       345 spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~-~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~  422 (741)
T 2ecf_A          345 LDDGSILWSSERTGFQHLYRIDSKGK-AAALTH-GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLS  422 (741)
T ss_dssp             CTTSCEEEEECTTSSCEEEEECSSSC-EEESCC-SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECC
T ss_pred             CCCCeEEEEecCCCccEEEEEcCCCC-eeeeee-cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecc
Confidence            9999988898899988888775 333 333322 23333343 58889987765554 44  889999875444444554


Q ss_pred             eccccEEEEEEeCCCCEEEEEeCC----CcEEEEcCCCC
Q psy15995        400 GHNKPITALALSPDRGTVFTGSHD----GFITRWNAKTG  434 (683)
Q Consensus       400 ~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~w~~~~~  434 (683)
                      . ...+..++|+||+++++....+    ..+.+++...+
T Consensus       423 ~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~  460 (741)
T 2ecf_A          423 K-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE  460 (741)
T ss_dssp             C-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred             c-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence            4 5678899999999998866543    46888887544

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.95  E-value=4.7e-26  Score=243.66  Aligned_cols=365  Identities=14%  Similarity=0.113  Sum_probs=242.8

Q ss_pred             ceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC----
Q psy15995         87 AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS----  162 (683)
Q Consensus        87 ~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----  162 (683)
                      .+.+++|||||+++++ +.||+|++||+.+++....+..+...           ...+..++|||||++||+++.+    
T Consensus        18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~-----------~~~v~~~~~SpDg~~l~~~~~~~~~~   85 (723)
T 1xfd_A           18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIE-----------SLRAIRYEISPDREYALFSYNVEPIY   85 (723)
T ss_dssp             CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTT-----------TTTCSEEEECTTSSEEEEEESCCCCS
T ss_pred             cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEecccccc-----------ccccceEEECCCCCEEEEEecCccce
Confidence            4678999999998876 78999999999998766555433210           0147899999999999998764    


Q ss_pred             -----ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCe-----
Q psy15995        163 -----GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPI-----  232 (683)
Q Consensus       163 -----~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----  232 (683)
                           +.+.+||+.+++.........+...+..++|||||+.+++++..   .+.+|+.++++.......+...+     
T Consensus        86 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~---~i~~~~~~~g~~~~~~~~~~~~~~~~g~  162 (723)
T 1xfd_A           86 QHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFEN---NIYYCAHVGKQAIRVVSTGKEGVIYNGL  162 (723)
T ss_dssp             SSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETT---EEEEESSSSSCCEEEECCCBTTTEEEEE
T ss_pred             eecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECC---eEEEEECCCCceEEEecCCCCCceECcc
Confidence                 78889999988753222233344458899999999999998874   36777777777666555544433     


Q ss_pred             -------------EEEEeecCCCeEEEEee-CCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEE
Q psy15995        233 -------------NSCDFKPSRPFRIITGS-EDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL  298 (683)
Q Consensus       233 -------------~~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  298 (683)
                                   ..++|+|+++. |++++ .++.+.+|++.....     .+...+..+.|.++|..    ..+..|++
T Consensus       163 ~~~v~~ee~~~~~~~~~~SpDg~~-la~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~----~~~~~l~~  232 (723)
T 1xfd_A          163 SDWLYEEEILKTHIAHWWSPDGTR-LAYAAINDSRVPIMELPTYTG-----SIYPTVKPYHYPKAGSE----NPSISLHV  232 (723)
T ss_dssp             CCHHHHHTTSSSSEEEEECTTSSE-EEEEEEECTTSCEEEECCCSS-----SSSCCCEEEECCBTTSC----CCEEEEEE
T ss_pred             cceeEEEEeccCcceEEECCCCCE-EEEEEECCCccceEEeeccCC-----cCCCcceeccCCCCCCC----CCeeEEEE
Confidence                         78999999997 55554 445677787543221     13345788999988863    33568999


Q ss_pred             EeCCCCeeEEeccCC----ccccCeEEEEEccCCCEEEEEECC----CcEEEEECCCCceeeEEEecCcceeceEEEEec
Q psy15995        299 YDGASADLVSELGNP----AHKGGVYAVAWKPDGTQLLTASGD----KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ  370 (683)
Q Consensus       299 w~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (683)
                      ||+.+++....+..+    .+...+..++|+|||+++++....    ..|++||+.+++....+..              
T Consensus       233 ~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--------------  298 (723)
T 1xfd_A          233 IGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED--------------  298 (723)
T ss_dssp             EESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE--------------
T ss_pred             EECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe--------------
Confidence            999988865555431    125678999999999988776532    4688999888765433211              


Q ss_pred             CCEEEEEecCCcEEEEecCCCCcceeeeeeccccE----EEEEEeCCCCEEEE--EeCCC------cEEEEc-CCCCCc-
Q psy15995        371 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPI----TALALSPDRGTVFT--GSHDG------FITRWN-AKTGEN-  436 (683)
Q Consensus       371 ~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~--~~~dg------~i~~w~-~~~~~~-  436 (683)
                                                   .+...+    ..++|+|||+.|+.  +..++      .|.+|| ..+++. 
T Consensus       299 -----------------------------~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~  349 (723)
T 1xfd_A          299 -----------------------------ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSND  349 (723)
T ss_dssp             -----------------------------ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSC
T ss_pred             -----------------------------ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcc
Confidence                                         111222    26789999998775  44566      466666 333320 


Q ss_pred             -ceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCcee
Q psy15995        437 -DRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKV  515 (683)
Q Consensus       437 -~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  515 (683)
                       ...+..+                                                                        
T Consensus       350 ~~~~l~~~------------------------------------------------------------------------  357 (723)
T 1xfd_A          350 NIQSITSG------------------------------------------------------------------------  357 (723)
T ss_dssp             CCCBSCCS------------------------------------------------------------------------
T ss_pred             ceeEeecC------------------------------------------------------------------------
Confidence             1111100                                                                        


Q ss_pred             eeecCCCCCc-EEEEccCCCEEEEEcCC---CcEEEEEcCCCcc--Ccceee--cCCcCeeEEEECCCCCEEEEEeCCC-
Q psy15995        516 SSLPIDYEPS-SISLDHEHGLVAVGGAD---SKVHIYELNNKSL--SPKAEL--DHLGPVTDCSFSPSNEYLVASDAHR-  586 (683)
Q Consensus       516 ~~~~~~~~~~-~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~--~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~-  586 (683)
                           ...+. .++|+||++.|+..+.+   +.+++|++.....  ......  .+...+..++|+|||++|+.....- 
T Consensus       358 -----~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~  432 (723)
T 1xfd_A          358 -----DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPG  432 (723)
T ss_dssp             -----SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSS
T ss_pred             -----CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCC
Confidence                 01112 35899999998766554   7899999865432  111111  1566789999999999998754322 


Q ss_pred             --eEEEEECCCC
Q psy15995        587 --KVVLYRVPDF  596 (683)
Q Consensus       587 --~i~i~~~~~~  596 (683)
                        ...+++..++
T Consensus       433 ~p~~~~~~~~~~  444 (723)
T 1xfd_A          433 VPMVTVHNTTDK  444 (723)
T ss_dssp             SCCEEEEETTTC
T ss_pred             CCeEEEEECCCC
Confidence              2344555443

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.95  E-value=4.8e-25  Score=211.74  Aligned_cols=279  Identities=12%  Similarity=0.073  Sum_probs=204.7

Q ss_pred             eeCCCCCeEEEe--cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecC-CCCEEEEeCCCccc-ccccccc
Q psy15995         51 GGDPKGKNFLYT--NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDI-SGKVRIWDTVNKEH-ILKNEFH  126 (683)
Q Consensus        51 ~~s~~~~~l~~~--~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~-dg~i~iwd~~~~~~-~~~~~~~  126 (683)
                      .|++++++++.+  .++.|.+||.++++....+..+...+ +++|+|||++|++++. ++.|.+||+.+++. ...+..+
T Consensus         4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~   82 (331)
T 3u4y_A            4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG   82 (331)
T ss_dssp             ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred             eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence            466777765544  57899999999999888877777777 9999999997766554 88999999998876 4333332


Q ss_pred             cCCCCcccceeeeeecceee-eEeeccceEEEeecCCc---cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEE
Q psy15995        127 PIGGPIKDIGTLLSLTSIRN-ILVLSIGFYIASGDISG---KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVV  202 (683)
Q Consensus       127 ~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  202 (683)
                                     ..... ++|+|+|++|+++..++   .|.+||+.+++.+.....   .....+++|+|||+++++
T Consensus        83 ---------------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~  144 (331)
T 3u4y_A           83 ---------------QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI---PYDAVGIAISPNGNGLIL  144 (331)
T ss_dssp             ---------------SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC---CTTEEEEEECTTSSCEEE
T ss_pred             ---------------CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC---CCCccceEECCCCCEEEE
Confidence                           23344 89999999999666553   899999998876554332   356789999999998888


Q ss_pred             EecCCceEEEEEEccCCCce----eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce---eeeccccccCe
Q psy15995        203 VGEGRERFGHVFMSETGTSV----GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF---KMTKQEHSRFV  275 (683)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~---~~~~~~~~~~v  275 (683)
                      +.......+.+|+.+....+    ............++|+|+++++++++..++.|.+||..+++.   +..+.. ...+
T Consensus       145 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~  223 (331)
T 3u4y_A          145 IDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLP  223 (331)
T ss_dssp             EEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCC
T ss_pred             EecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCC
Confidence            77654443567777653332    122244556899999999997667777899999999998887   666654 3667


Q ss_pred             EEEEECCCCCEEEEEc-CCCcEEEEeCCCCee--EEeccCC-----ccccCeEEEEEccCCCEEEEEEC-CCcEEEEECC
Q psy15995        276 QAVRYSPSGSHFASAG-FDGKVFLYDGASADL--VSELGNP-----AHKGGVYAVAWKPDGTQLLTASG-DKTCKLWDIE  346 (683)
Q Consensus       276 ~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~--~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~  346 (683)
                      ..++|+|+|+++++++ .++.|.+||..+++.  +..+...     ........++|+|++++|++++. ++.|.+||+.
T Consensus       224 ~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~  303 (331)
T 3u4y_A          224 GTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS  303 (331)
T ss_dssp             CCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred             ceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence            8999999999776665 477899999999877  3332211     11122356899999998876665 5689999998


Q ss_pred             CCc
Q psy15995        347 TKS  349 (683)
Q Consensus       347 ~~~  349 (683)
                      ...
T Consensus       304 ~~~  306 (331)
T 3u4y_A          304 GKV  306 (331)
T ss_dssp             SCE
T ss_pred             CCc
Confidence            654

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.95  E-value=7.2e-25  Score=235.07  Aligned_cols=325  Identities=12%  Similarity=0.076  Sum_probs=243.0

Q ss_pred             cceeeeEeeccceEEEeecC-Cc-----cEEEEeccccceeeeccccccC----------------------CCeeEEEE
Q psy15995        142 TSIRNILVLSIGFYIASGDI-SG-----KVRIWDTVNKEHILKNEFHPIG----------------------GPIKDIAW  193 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~-d~-----~i~iwd~~~~~~~~~~~~~~~~----------------------~~i~~~~~  193 (683)
                      ..+..++|+|||++|++++. |+     .|++||+.+++.........+.                      ..+.+++|
T Consensus        37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  116 (741)
T 2ecf_A           37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW  116 (741)
T ss_dssp             CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred             CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence            56889999999999999988 88     8999999998765444433322                      34789999


Q ss_pred             cCCCCeEEEEecCCceEEEEEEccCCC--ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecccc
Q psy15995        194 SPDNQRMVVVGEGRERFGHVFMSETGT--SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH  271 (683)
Q Consensus       194 s~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~  271 (683)
                      +|||++|++++.   ..+.+|+.+++.  ....+..|...+..++|+|+|+. |+.++ ++.|++||+.+++.......+
T Consensus       117 SpDg~~l~~~~~---~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~-la~~~-~~~i~~~d~~~g~~~~~~~~~  191 (741)
T 2ecf_A          117 SPDAQRLLFPLG---GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGF-VSFIR-GRNLWVIDLASGRQMQLTADG  191 (741)
T ss_dssp             CTTSSEEEEEET---TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSE-EEEEE-TTEEEEEETTTTEEEECCCCC
T ss_pred             CCCCCEEEEEeC---CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCE-EEEEe-CCcEEEEecCCCCEEEeccCC
Confidence            999999999887   236778877773  55677888899999999999995 66666 469999999988776655444


Q ss_pred             ccC----------------eEEEEECCCCCEEEEEcCCC---------------------------------cEEEEeCC
Q psy15995        272 SRF----------------VQAVRYSPSGSHFASAGFDG---------------------------------KVFLYDGA  302 (683)
Q Consensus       272 ~~~----------------v~~~~~~~~~~~l~~~~~dg---------------------------------~i~iw~~~  302 (683)
                      ...                +..++|+|||++|++++.|+                                 .|++||+.
T Consensus       192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~  271 (741)
T 2ecf_A          192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA  271 (741)
T ss_dssp             CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred             ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence            332                47899999999999887665                                 78999998


Q ss_pred             C-CeeEEeccCCccccCeEEEEEccCCCEEEEEEC-----CCcEEEEECCCCceeeEEEecCcc---eeceEEEEecCCE
Q psy15995        303 S-ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG-----DKTCKLWDIETKSVVSEFIMGNQV---EDQQVSCLWQGDY  373 (683)
Q Consensus       303 ~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  373 (683)
                      + ++.........+...+..++| |||+.|++++.     +..|++||+.+++....+......   ....+.+++++++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~  350 (741)
T 2ecf_A          272 EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSI  350 (741)
T ss_dssp             TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCE
T ss_pred             CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeE
Confidence            8 776554432247788999999 99999987764     467999999998876655443322   2346788899998


Q ss_pred             EEEEecCCcEEEEecCCCCcceeeeeeccccEEEE-EEeCCCCEEEE-EeCCC--cEEEEcCCC-CCcceeccCCCCcce
Q psy15995        374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITAL-ALSPDRGTVFT-GSHDG--FITRWNAKT-GENDRVQGAGHGNQI  448 (683)
Q Consensus       374 l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~-~~~dg--~i~~w~~~~-~~~~~~~~~~~~~~v  448 (683)
                      ++++..+|...+|....... ...+..|...+..+ .|+|+++.++. ++.++  .+++|++.. +.....+..  ...+
T Consensus       351 ~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~--~~~~  427 (741)
T 2ecf_A          351 LWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK--APGM  427 (741)
T ss_dssp             EEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC--SCSE
T ss_pred             EEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc--CCCc
Confidence            88889999888887764344 66777788888887 59999998764 55555  899998764 333333322  4556


Q ss_pred             eEEEEe--CCeEEEEEcC----CeEEEEeCCCC
Q psy15995        449 NGMKAT--GELLYTCGID----DTIKQVDLSSN  475 (683)
Q Consensus       449 ~~~~~~--~~~l~~~~~d----~~i~~~~~~~~  475 (683)
                      ..+.++  ++.++....+    ..+.+++....
T Consensus       428 ~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~  460 (741)
T 2ecf_A          428 HSASFARNASVYVDSWSNNSTPPQIELFRANGE  460 (741)
T ss_dssp             EEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred             eEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence            677776  6777665443    46888887554

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.94  E-value=5.9e-25  Score=234.20  Aligned_cols=316  Identities=15%  Similarity=0.137  Sum_probs=217.1

Q ss_pred             EeeCCCCCeEEEecCCeEEEEeCCCCccc-ccccCcc-----------------cceEEEEECCCCcEEEEecCCCCEEE
Q psy15995         50 LGGDPKGKNFLYTNGNSVIIRNIENPAIS-DIYTEHS-----------------CAVNVAKYSPSGFYIASGDISGKVRI  111 (683)
Q Consensus        50 ~~~s~~~~~l~~~~~~~i~v~~~~~~~~~-~~~~~h~-----------------~~v~~~~~s~d~~~las~~~dg~i~i  111 (683)
                      +.|+  |+.+++..+..| +||+.+++.+ ..+..|.                 ..|.+++|||| ++++.+ .++.|++
T Consensus        31 ~~w~--g~~~~~~~~~~i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~~i~~  105 (706)
T 2z3z_A           31 LQWM--GDNYVFIEGDDL-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQGGLVG  105 (706)
T ss_dssp             CEEE--TTEEEEEETTEE-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETTEEEE
T ss_pred             CcCc--CCeEEEEeCCcE-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECCEEEE
Confidence            4566  555555544448 9999999873 4444443                 46999999999 555554 3589999


Q ss_pred             EeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccc-----cceeeecccccc--
Q psy15995        112 WDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVN-----KEHILKNEFHPI--  184 (683)
Q Consensus       112 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~-----~~~~~~~~~~~~--  184 (683)
                      ||+.+++...... +.              ..+..++|+|||++||++ .++.|++||+.+     ++..........  
T Consensus       106 ~d~~~~~~~~l~~-~~--------------~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~  169 (706)
T 2z3z_A          106 FDMLARKVTYLFD-TN--------------EETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETL  169 (706)
T ss_dssp             EETTTTEEEEEEC-CT--------------TCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTE
T ss_pred             EECCCCceEEccC-Cc--------------ccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCe
Confidence            9998876433221 11              457788999999999995 689999999988     764432221110  


Q ss_pred             ----------CCCeeEEEEcCCCCeEEEEecC-------------------------------CceEEEEEEccCCCcee
Q psy15995        185 ----------GGPIKDIAWSPDNQRMVVVGEG-------------------------------RERFGHVFMSETGTSVG  223 (683)
Q Consensus       185 ----------~~~i~~~~~s~~~~~l~~~~~~-------------------------------~~~~~~~~~~~~~~~~~  223 (683)
                                ...+.+++|+|||++|++++.+                               ....+.+|+.++++...
T Consensus       170 ~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~  249 (706)
T 2z3z_A          170 VYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY  249 (706)
T ss_dssp             EESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE
T ss_pred             EcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe
Confidence                      0125899999999999998721                               33456777777776544


Q ss_pred             ee--ecCCcCeEEEEeecCCCeEEEEeeCCC-----eEEEEcCCCCceeeecc-c-ccc---CeEEEEECC--CCCEEEE
Q psy15995        224 EI--SGQSKPINSCDFKPSRPFRIITGSEDN-----TIAVFEGPPFKFKMTKQ-E-HSR---FVQAVRYSP--SGSHFAS  289 (683)
Q Consensus       224 ~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~-~-~~~---~v~~~~~~~--~~~~l~~  289 (683)
                      ..  ..|...+..++|+|+++. +++++.++     .|.+||..+++....+. . +..   .+.+++|+|  +|+++++
T Consensus       250 ~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~  328 (706)
T 2z3z_A          250 LQTGEPKEKFLTNLSWSPDENI-LYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQ  328 (706)
T ss_dssp             CCCCSCTTCEEEEEEECTTSSE-EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEE
T ss_pred             eccCCCCceeEeeEEEECCCCE-EEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEE
Confidence            33  256778999999999996 77666655     89999999883333322 2 222   246789999  9999999


Q ss_pred             EcCCCcEEEEeCC-CCeeEEeccCCccccCeEE-EEEccCCCEEEEEECC-C----cEEEEECCCCceeeEEEecCccee
Q psy15995        290 AGFDGKVFLYDGA-SADLVSELGNPAHKGGVYA-VAWKPDGTQLLTASGD-K----TCKLWDIETKSVVSEFIMGNQVED  362 (683)
Q Consensus       290 ~~~dg~i~iw~~~-~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~d-g----~i~iwd~~~~~~~~~~~~~~~~~~  362 (683)
                      ++.++.+++|.+. ++..+..+..  +...+.. ++|+|+++.|+.++.+ +    .|..||+.+++. .          
T Consensus       329 ~~~~g~~~l~~~~~~~~~~~~l~~--~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~-~----------  395 (706)
T 2z3z_A          329 SRRDGWNHLYLYDTTGRLIRQVTK--GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKT-K----------  395 (706)
T ss_dssp             ECTTSSCEEEEEETTSCEEEECCC--SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCC-E----------
T ss_pred             EccCCccEEEEEECCCCEEEecCC--CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCc-e----------
Confidence            9999999999876 5666666654  6667776 7999999988776654 3    455566655431 1          


Q ss_pred             ceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCC----CcEEEEcCCCCC
Q psy15995        363 QQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHD----GFITRWNAKTGE  435 (683)
Q Consensus       363 ~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~w~~~~~~  435 (683)
                                                        .+ .|...+.+++|+||+++++....+    +.|.+||+.+++
T Consensus       396 ----------------------------------~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          396 ----------------------------------DL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             ----------------------------------ES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred             ----------------------------------ec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence                                              11 145568889999999988876443    469999998876

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.94  E-value=5.2e-25  Score=234.62  Aligned_cols=322  Identities=11%  Similarity=0.077  Sum_probs=222.4

Q ss_pred             eEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee-eeccccc-----------------cCeEEEEECCCCCEEEEEcCC
Q psy15995        232 INSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK-MTKQEHS-----------------RFVQAVRYSPSGSHFASAGFD  293 (683)
Q Consensus       232 v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~l~~~~~d  293 (683)
                      +..+.|.  +. .+++.+.++ | +||..+++.+ ..+..+.                 ..|.+++|+|| +.++.+. +
T Consensus        28 ~~~~~w~--g~-~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~  100 (706)
T 2z3z_A           28 VVGLQWM--GD-NYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-Q  100 (706)
T ss_dssp             CTTCEEE--TT-EEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-T
T ss_pred             CCCCcCc--CC-eEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-C
Confidence            4456777  44 367777777 8 9999998873 3333332                 46999999999 6666554 5


Q ss_pred             CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCC-----CceeeEEEecCcc--------
Q psy15995        294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIET-----KSVVSEFIMGNQV--------  360 (683)
Q Consensus       294 g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~--------  360 (683)
                      +.|++||+.+++......   +...+.+++|+|||+.|+++ .++.|++||+.+     ++...........        
T Consensus       101 ~~i~~~d~~~~~~~~l~~---~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~  176 (706)
T 2z3z_A          101 GGLVGFDMLARKVTYLFD---TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH  176 (706)
T ss_dssp             TEEEEEETTTTEEEEEEC---CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred             CEEEEEECCCCceEEccC---CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence            999999999987765543   55678889999999999985 678999999988     6654332222111        


Q ss_pred             -----eeceEEEEecCCEEEEEe---------------------------------cCCcEEEEecCCCCcceeee-eec
Q psy15995        361 -----EDQQVSCLWQGDYLLTVS---------------------------------LSGFISYLDVNNPSTPIRVI-KGH  401 (683)
Q Consensus       361 -----~~~~~~~~~~~~~l~~~~---------------------------------~~g~i~~~~~~~~~~~~~~~-~~~  401 (683)
                           ....+.++|++++|++++                                 .+..+.+||+..+....... ..|
T Consensus       177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~  256 (706)
T 2z3z_A          177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK  256 (706)
T ss_dssp             GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred             hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence                 136788999999999987                                 34679999998644321111 246


Q ss_pred             cccEEEEEEeCCCCEEEEEeCCC-----cEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCc
Q psy15995        402 NKPITALALSPDRGTVFTGSHDG-----FITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNA  476 (683)
Q Consensus       402 ~~~v~~~~~~~~~~~l~~~~~dg-----~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~  476 (683)
                      ...+.+++|+|||+.|++++.++     .|.+||+.+++..........                  .            
T Consensus       257 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~------------------~------------  306 (706)
T 2z3z_A          257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD------------------K------------  306 (706)
T ss_dssp             TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC------------------S------------
T ss_pred             ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC------------------C------------
Confidence            67899999999999999887765     888999877632221100000                  0            


Q ss_pred             ccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEcc--CCCEEEEEcCCCcEEEEEcC-CC
Q psy15995        477 YSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDH--EHGLVAVGGADSKVHIYELN-NK  553 (683)
Q Consensus       477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~dg~i~i~d~~-~~  553 (683)
                                                                .....+..++|+|  ++++++++..|+.+++|.++ ++
T Consensus       307 ------------------------------------------~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~  344 (706)
T 2z3z_A          307 ------------------------------------------HYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG  344 (706)
T ss_dssp             ------------------------------------------SCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTS
T ss_pred             ------------------------------------------CeECccCCceeecCCCCEEEEEEccCCccEEEEEECCC
Confidence                                                      0000135678999  99999999999999999876 33


Q ss_pred             ccCcceeecCCcCeeE-EEECCCCCEEEEEeCC-C----eEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEee
Q psy15995        554 SLSPKAELDHLGPVTD-CSFSPSNEYLVASDAH-R----KVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGS  627 (683)
Q Consensus       554 ~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~d-~----~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~  627 (683)
                      .... ....+...+.. ++|+||++.|+.++.+ +    .|..||+.+++... ..   |...+.+++|||||++|+...
T Consensus       345 ~~~~-~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~-l~---~~~~~~~~~~spdg~~l~~~~  419 (706)
T 2z3z_A          345 RLIR-QVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKD-LT---PESGMHRTQLSPDGSAIIDIF  419 (706)
T ss_dssp             CEEE-ECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEE-SC---CSSSEEEEEECTTSSEEEEEE
T ss_pred             CEEE-ecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCcee-cc---CCCceEEEEECCCCCEEEEEe
Confidence            3322 22345566776 7999999988765544 3    67777877766432 21   667799999999999988765


Q ss_pred             cC----CcEEEEeCCCCc
Q psy15995        628 LD----TTIIIWSLASPA  641 (683)
Q Consensus       628 ~d----~~v~iw~~~~~~  641 (683)
                      .+    +.|++||+.+++
T Consensus       420 ~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          420 QSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             ECSSCSCEEEEEESSSCE
T ss_pred             cCCCCCcEEEEEECCCCe
Confidence            44    469999998877

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.94  E-value=2.7e-24  Score=206.46  Aligned_cols=287  Identities=11%  Similarity=0.103  Sum_probs=202.4

Q ss_pred             EEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC-CCcEEEEeCCCCee-EEeccC
Q psy15995        235 CDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF-DGKVFLYDGASADL-VSELGN  312 (683)
Q Consensus       235 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~-~~~~~~  312 (683)
                      ..|.++++..+++.+.++.|.+||..+++....+..+...+ .++|+|+++++++++. ++.|.+||..+++. ...+..
T Consensus         3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~   81 (331)
T 3u4y_A            3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE   81 (331)
T ss_dssp             ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred             eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence            34666777778899999999999999999888777666667 9999999997666655 88999999999887 555543


Q ss_pred             CccccCeEEEEEccCCCEEEEEECCC---cEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecC
Q psy15995        313 PAHKGGVYAVAWKPDGTQLLTASGDK---TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVN  389 (683)
Q Consensus       313 ~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~  389 (683)
                        +..+..+++|+|+++++++...++   .|.+||+.+++.+..+.                                  
T Consensus        82 --~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~----------------------------------  125 (331)
T 3u4y_A           82 --GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP----------------------------------  125 (331)
T ss_dssp             --CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE----------------------------------
T ss_pred             --CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE----------------------------------
Confidence              444554599999999999555543   89999999887654331                                  


Q ss_pred             CCCcceeeeeeccccEEEEEEeCCCCEEEEE-eCCCc-EEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeE
Q psy15995        390 NPSTPIRVIKGHNKPITALALSPDRGTVFTG-SHDGF-ITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTI  467 (683)
Q Consensus       390 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i  467 (683)
                                 +.....+++|+|+|++++++ ..++. |.+|++..........                          
T Consensus       126 -----------~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~--------------------------  168 (331)
T 3u4y_A          126 -----------IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG--------------------------  168 (331)
T ss_dssp             -----------CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE--------------------------
T ss_pred             -----------CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC--------------------------
Confidence                       12335789999999866655 55578 9999987532211000                          


Q ss_pred             EEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEE-cCCCcEE
Q psy15995        468 KQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVG-GADSKVH  546 (683)
Q Consensus       468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~  546 (683)
                                                                     ....+....+..++++|++++++++ ..++.|.
T Consensus       169 -----------------------------------------------~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~  201 (331)
T 3u4y_A          169 -----------------------------------------------QEFISGGTRPFNITFTPDGNFAFVANLIGNSIG  201 (331)
T ss_dssp             -----------------------------------------------EEEECSSSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred             -----------------------------------------------CccccCCCCccceEECCCCCEEEEEeCCCCeEE
Confidence                                                           0001122345789999999966554 5689999


Q ss_pred             EEEcCCCccCc-ceeecCCcCeeEEEECCCCCEEEEEe-CCCeEEEEECCCCccccccceee----ecc---cEEEEEec
Q psy15995        547 IYELNNKSLSP-KAELDHLGPVTDCSFSPSNEYLVASD-AHRKVVLYRVPDFELAHNKEWGF----HSA---KVNCVAWS  617 (683)
Q Consensus       547 i~d~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~----h~~---~v~~~~~s  617 (683)
                      +||+.+++... .........+..++|+|||++|++++ .++.|.+||+.++++........    +..   ....++|+
T Consensus       202 v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  281 (331)
T 3u4y_A          202 ILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALN  281 (331)
T ss_dssp             EEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEEC
T ss_pred             EEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEEC
Confidence            99999887611 12233556788999999999877665 57889999999988722211110    112   23568999


Q ss_pred             CCCCeEEEeec-CCcEEEEeCCCCce
Q psy15995        618 PDSALVASGSL-DTTIIIWSLASPAK  642 (683)
Q Consensus       618 ~d~~~l~~~~~-d~~v~iw~~~~~~~  642 (683)
                      ||+++|++++. ++.|.+||+.....
T Consensus       282 pdg~~l~v~~~~~~~v~v~d~~~~~~  307 (331)
T 3u4y_A          282 KTETKLFISANISRELKVFTISGKVV  307 (331)
T ss_dssp             TTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred             CCCCEEEEecCCCCcEEEEEecCCcc
Confidence            99998866554 56999999987553

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.94  E-value=4.5e-25  Score=235.52  Aligned_cols=359  Identities=10%  Similarity=0.031  Sum_probs=240.3

Q ss_pred             EEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCccc---ceEEEEECCCCcEEEEecC---------CCCEEEEeCC
Q psy15995         48 IVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSC---AVNVAKYSPSGFYIASGDI---------SGKVRIWDTV  115 (683)
Q Consensus        48 ~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~---~v~~~~~s~d~~~las~~~---------dg~i~iwd~~  115 (683)
                      ..++|+|||++++.+.++.|.+||+.+++....+.+|..   .|.+++|||||++||+++.         ++.|++||+.
T Consensus        19 ~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~   98 (719)
T 1z68_A           19 FFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS   98 (719)
T ss_dssp             CCCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred             CccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence            366799999888877889999999999998777766654   3999999999999998876         6899999999


Q ss_pred             CcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCC---------
Q psy15995        116 NKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGG---------  186 (683)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---------  186 (683)
                      +++.+......               ..+..++|||||++||.+. ++.|++||+.+++.... ...++..         
T Consensus        99 ~g~~~~~~~l~---------------~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l-~~~~~~~~v~~g~~~~  161 (719)
T 1z68_A           99 NGEFVRGNELP---------------RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQI-TFNGRENKIFNGIPDW  161 (719)
T ss_dssp             TTEECCSSCCC---------------SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC-CCCCBTTTEEESSCCH
T ss_pred             CCccccceecC---------------cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEE-ecCCCcCCeEcccccc
Confidence            88653111111               3477899999999999985 78999999988765422 2122222         


Q ss_pred             --------CeeEEEEcCCCCeEEEEecCCc--eEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEE
Q psy15995        187 --------PIKDIAWSPDNQRMVVVGEGRE--RFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAV  256 (683)
Q Consensus       187 --------~i~~~~~s~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i  256 (683)
                              ...+++|||||++|++++.+..  ....+....        ..+...+..+.+...+..     .....|++
T Consensus       162 v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~yp~~g~~-----~~~~~l~~  228 (719)
T 1z68_A          162 VYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYG--------DEQYPRTINIPYPKAGAK-----NPVVRIFI  228 (719)
T ss_dssp             HHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECC--------SSSSCEEEEEECCBTTSC-----CCEEEEEE
T ss_pred             eeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccC--------CCCCccceeecCCCCCCC-----CCeeEEEE
Confidence                    1258999999999999875422  111111111        123334556666555431     23357999


Q ss_pred             EcCCCCcee--------eeccccccCeEEEEECCCCCEEEEEcCC----CcEEEEe----CCCCeeEEecc--CCccccC
Q psy15995        257 FEGPPFKFK--------MTKQEHSRFVQAVRYSPSGSHFASAGFD----GKVFLYD----GASADLVSELG--NPAHKGG  318 (683)
Q Consensus       257 w~~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iw~----~~~~~~~~~~~--~~~~~~~  318 (683)
                      ||+.+++..        ..+.+|...+..++|+||++.+++....    ..|.+||    ..+++....+.  ...|...
T Consensus       229 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~  308 (719)
T 1z68_A          229 IDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGW  308 (719)
T ss_dssp             EESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSC
T ss_pred             EECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCce
Confidence            999887653        2234688889999999998776664432    2488899    88877655441  0125555


Q ss_pred             eE-----EEEEccCCCEEEE--EECCC--cEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecC-----CcEE
Q psy15995        319 VY-----AVAWKPDGTQLLT--ASGDK--TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS-----GFIS  384 (683)
Q Consensus       319 i~-----~~~~~~~~~~l~~--~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----g~i~  384 (683)
                      +.     .+.|+|||+.++.  ...+|  .|.+||+.+++. ..+. ............ +++.++..+.+     +...
T Consensus       309 ~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~-~~lt-~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~  385 (719)
T 1z68_A          309 AGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA-IQIT-SGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRN  385 (719)
T ss_dssp             SSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC-EECS-CSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBE
T ss_pred             EccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce-Eecc-cCceEEEEEEEE-eCCEEEEEEecCCCCCceEE
Confidence            65     7899999996655  33455  477778776652 2222 222223334444 77777777665     7788


Q ss_pred             EEecCCC-Cc-ceeeee----eccccEEEEEEeCCCCEEEEE-eCC--CcEEEEcCCCCCccee
Q psy15995        385 YLDVNNP-ST-PIRVIK----GHNKPITALALSPDRGTVFTG-SHD--GFITRWNAKTGENDRV  439 (683)
Q Consensus       385 ~~~~~~~-~~-~~~~~~----~~~~~v~~~~~~~~~~~l~~~-~~d--g~i~~w~~~~~~~~~~  439 (683)
                      +|.+... .. ....+.    +|...+..+.|+|++++++.. +..  ..+.+||+.+++....
T Consensus       386 l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~  449 (719)
T 1z68_A          386 IYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKI  449 (719)
T ss_dssp             EEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEEEE
T ss_pred             EEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEEEE
Confidence            8887642 21 122222    255678889999999887743 333  4688999888775433

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.93  E-value=1.2e-23  Score=203.31  Aligned_cols=270  Identities=14%  Similarity=0.162  Sum_probs=185.9

Q ss_pred             cCCeEEEEeCC-CCc--ccccccCcccceEEEEECCCCcEEEEecCC-CCEEEEeCC--CcccccccccccCCCCcccce
Q psy15995         63 NGNSVIIRNIE-NPA--ISDIYTEHSCAVNVAKYSPSGFYIASGDIS-GKVRIWDTV--NKEHILKNEFHPIGGPIKDIG  136 (683)
Q Consensus        63 ~~~~i~v~~~~-~~~--~~~~~~~h~~~v~~~~~s~d~~~las~~~d-g~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~  136 (683)
                      .++.|.+||++ +++  .+.. ..|...+.+++|+|+|++|++++.+ +.|.+|++.  +++.....             
T Consensus        13 ~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~-------------   78 (343)
T 1ri6_A           13 ESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAA-------------   78 (343)
T ss_dssp             GGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE-------------
T ss_pred             CCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecc-------------
Confidence            57899999985 332  2332 3577889999999999999888776 899999997  44321111             


Q ss_pred             eeeeecceeeeEeeccceEEEeec-CCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEE
Q psy15995        137 TLLSLTSIRNILVLSIGFYIASGD-ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFM  215 (683)
Q Consensus       137 ~~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~  215 (683)
                      .......+..++|+|+|++|++++ .++.|.+||+.++..............+.+++|+|+++++++++... ..+.+|+
T Consensus        79 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~v~~~d  157 (343)
T 1ri6_A           79 ESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ-DRICLFT  157 (343)
T ss_dssp             EEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG-TEEEEEE
T ss_pred             ccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCC-CEEEEEE
Confidence            111113578899999999886655 48899999994322111111122335689999999999988877332 2377888


Q ss_pred             ccC-CCcee----eeec-CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC--Cce--eeecc---c---cccCeEEEE
Q psy15995        216 SET-GTSVG----EISG-QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP--FKF--KMTKQ---E---HSRFVQAVR  279 (683)
Q Consensus       216 ~~~-~~~~~----~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~--~~~--~~~~~---~---~~~~v~~~~  279 (683)
                      .++ ++...    .+.. ....+..++|+|+++++++++..++.+.+|+...  ++.  .....   .   ....+..++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  237 (343)
T 1ri6_A          158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH  237 (343)
T ss_dssp             ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEE
T ss_pred             ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceE
Confidence            876 54332    2233 3457889999999997566666899999999853  332  11111   1   123577899


Q ss_pred             ECCCCCEEE-EEcCCCcEEEEeCC--C--CeeEEeccCCccccCeEEEEEccCCCEEEEEE-CCCcEEEEEC--CCCce
Q psy15995        280 YSPSGSHFA-SAGFDGKVFLYDGA--S--ADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS-GDKTCKLWDI--ETKSV  350 (683)
Q Consensus       280 ~~~~~~~l~-~~~~dg~i~iw~~~--~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~--~~~~~  350 (683)
                      |+|++++|+ +...++.|.+|++.  +  .+.+..+..  + ..+..++|+|++++|++++ .++.+.+|++  .+++.
T Consensus       238 ~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~--~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~  313 (343)
T 1ri6_A          238 ITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT--E-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL  313 (343)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC--S-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred             ECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC--C-CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee
Confidence            999999777 45578999999998  3  334444432  3 3388999999999888887 5799999954  45543

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.93  E-value=1e-23  Score=204.69  Aligned_cols=279  Identities=11%  Similarity=0.039  Sum_probs=214.6

Q ss_pred             CCeEEEeeCCCCCeEEEec--------CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEE-EecCCCCEEEEeCC
Q psy15995         45 GQPIVLGGDPKGKNFLYTN--------GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIA-SGDISGKVRIWDTV  115 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~--------~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~la-s~~~dg~i~iwd~~  115 (683)
                      ..+..+++||+|++++++.        ++.|.+||..+++.+..+.. ...+..++|+|||++++ +...++.|.+||..
T Consensus        41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~  119 (353)
T 3vgz_A           41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAK  119 (353)
T ss_dssp             SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence            4567899999999998876        56899999999998877764 44578999999999655 55667899999999


Q ss_pred             CcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec--CCccEEEEeccccceeeeccccccCCCeeEEEE
Q psy15995        116 NKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD--ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAW  193 (683)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~  193 (683)
                      +++.+..+..+....+.     ......+..++|+|+|+++++++  .++.|.+||..+++......  .....+..++|
T Consensus       120 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~  192 (353)
T 3vgz_A          120 TGEVKGRLVLDDRKRTE-----EVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ--NTGKMSTGLAL  192 (353)
T ss_dssp             TCCEEEEEESCCCCCCS-----SCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC--CCCTTCCCCEE
T ss_pred             CCeeEEEEecCCCcccc-----ccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec--CCCCccceEEE
Confidence            99877766554211000     00012367899999999777765  57889999999887654443  23355889999


Q ss_pred             cCCCCeEEEEecCCceEEEEEEccCCCceeeeec----CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc
Q psy15995        194 SPDNQRMVVVGEGRERFGHVFMSETGTSVGEISG----QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ  269 (683)
Q Consensus       194 s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~  269 (683)
                      +|++++++++..++  .+.+|+..+++....+..    +...+..++|+|+++.++++...++.|.+||..+++....+.
T Consensus       193 s~dg~~l~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~  270 (353)
T 3vgz_A          193 DSEGKRLYTTNADG--ELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA  270 (353)
T ss_dssp             ETTTTEEEEECTTS--EEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred             CCCCCEEEEEcCCC--eEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence            99999999887654  367888888888777664    556788999999999756666667999999999998877766


Q ss_pred             ccccCeEEEEECCCCCEEEEEc-CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC
Q psy15995        270 EHSRFVQAVRYSPSGSHFASAG-FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK  338 (683)
Q Consensus       270 ~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  338 (683)
                      ...  ...++|+|+++++++++ .++.|.+||..+++.+..+..   ...+.+++|+|++++++++..++
T Consensus       271 ~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~~  335 (353)
T 3vgz_A          271 APE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT---PTHPNSLALSADGKTLYVSVKQK  335 (353)
T ss_dssp             CSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC---CSEEEEEEECTTSCEEEEEEECC
T ss_pred             cCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec---CCCCCeEEEcCCCCEEEEEEccc
Confidence            433  25699999999665554 689999999999998888763   34689999999999887776654

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.93  E-value=8.5e-24  Score=203.87  Aligned_cols=278  Identities=15%  Similarity=0.111  Sum_probs=210.7

Q ss_pred             eEEEe-cCCeEEEEeCCCCcccccccCcc-c-ceEEEEECCCCcEE-EEecCCCCEEEEeCCCcccccccccccCCCCcc
Q psy15995         58 NFLYT-NGNSVIIRNIENPAISDIYTEHS-C-AVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIK  133 (683)
Q Consensus        58 ~l~~~-~~~~i~v~~~~~~~~~~~~~~h~-~-~v~~~~~s~d~~~l-as~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  133 (683)
                      +++++ .++.|.+||..+++.+..+.... . .+.+++|+|||+++ ++++.++.|.+||+.+++.+..+.....+    
T Consensus         3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~----   78 (337)
T 1pby_B            3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE----   78 (337)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT----
T ss_pred             EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc----
Confidence            44544 68899999999998887766322 2 58899999999766 55667889999999998776655432100    


Q ss_pred             cceeeeeecceeeeEeeccceEEEeec------------CCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEE
Q psy15995        134 DIGTLLSLTSIRNILVLSIGFYIASGD------------ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMV  201 (683)
Q Consensus       134 ~~~~~~~~~~i~~~~~s~~~~~l~~~~------------~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  201 (683)
                           .....+..++|+|+|++|++++            .++.|.+||+.+++.+.....   ...+.+++|+||+++++
T Consensus        79 -----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~  150 (337)
T 1pby_B           79 -----ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA---PRQITMLAWARDGSKLY  150 (337)
T ss_dssp             -----EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC---CSSCCCEEECTTSSCEE
T ss_pred             -----cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC---CCCcceeEECCCCCEEE
Confidence                 0113567899999999888885            579999999998876544332   35688899999999988


Q ss_pred             EEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCC-----------------------eEEEEc
Q psy15995        202 VVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDN-----------------------TIAVFE  258 (683)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----------------------~i~iw~  258 (683)
                      ++..    .+.+|+.++++....+..+... ..+.|+|++..+++++..++                       .|.+||
T Consensus       151 ~~~~----~i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d  225 (337)
T 1pby_B          151 GLGR----DLHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMD  225 (337)
T ss_dssp             EESS----SEEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEE
T ss_pred             EeCC----eEEEEECCCCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEe
Confidence            8832    2788998888877766654411 13378999886444443333                       468999


Q ss_pred             CCCCcee-eeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECC
Q psy15995        259 GPPFKFK-MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD  337 (683)
Q Consensus       259 ~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  337 (683)
                      ..+++.. ..+..+...+.+++|+|++++++++  ++.|.+||+.+++.+..+..   ...+.+++|+|+++++++++.+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~  300 (337)
T 1pby_B          226 LETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL---PHSYYSVNVSTDGSTVWLGGAL  300 (337)
T ss_dssp             TTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC---SSCCCEEEECTTSCEEEEESBS
T ss_pred             CCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC---CCceeeEEECCCCCEEEEEcCC
Confidence            9888764 2234556678899999999999888  69999999999988877753   3467899999999999999889


Q ss_pred             CcEEEEECCCCceeeEEEec
Q psy15995        338 KTCKLWDIETKSVVSEFIMG  357 (683)
Q Consensus       338 g~i~iwd~~~~~~~~~~~~~  357 (683)
                      +.|.+||+.+++.+..+...
T Consensus       301 ~~i~v~d~~~~~~~~~~~~~  320 (337)
T 1pby_B          301 GDLAAYDAETLEKKGQVDLP  320 (337)
T ss_dssp             SEEEEEETTTCCEEEEEECG
T ss_pred             CcEEEEECcCCcEEEEEEcC
Confidence            99999999999988877654

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.93  E-value=3.2e-24  Score=202.80  Aligned_cols=255  Identities=15%  Similarity=0.138  Sum_probs=192.4

Q ss_pred             cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCC-cccccccccccCCCCcccceeeeee
Q psy15995         63 NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVN-KEHILKNEFHPIGGPIKDIGTLLSL  141 (683)
Q Consensus        63 ~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  141 (683)
                      .++.|.+||+.+++.. .+..|...|.+++|+|||++|++++ ++.|.+||+.+ ++.......+.             .
T Consensus        20 ~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~-------------~   84 (297)
T 2ojh_A           20 MRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFA-------------T   84 (297)
T ss_dssp             CCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTC-------------C
T ss_pred             cceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccc-------------c
Confidence            4679999999998876 4566999999999999999999986 77999999998 75544332221             1


Q ss_pred             cceeeeEeeccceEEEeec--CCccEEEEec--cccceeeeccccccCCCeeEEEEcCCCCeEEEEe-cCCceEEEEEEc
Q psy15995        142 TSIRNILVLSIGFYIASGD--ISGKVRIWDT--VNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVG-EGRERFGHVFMS  216 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~--~d~~i~iwd~--~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~~~~~~~~~~~~  216 (683)
                      ..+.+++|+|+|++|++++  .++...||.+  .+++. .  .+.. ...+..++|+||++.+++.+ .+..  ..+|..
T Consensus        85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~--~~~~-~~~~~~~~~spdg~~l~~~~~~~~~--~~l~~~  158 (297)
T 2ojh_A           85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-R--LMTK-NLPSYWHGWSPDGKSFTYCGIRDQV--FDIYSM  158 (297)
T ss_dssp             CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-E--ECCS-SSSEEEEEECTTSSEEEEEEEETTE--EEEEEE
T ss_pred             ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-E--Eeec-CCCccceEECCCCCEEEEEECCCCc--eEEEEE
Confidence            4578899999999999988  3345555554  44432 1  1222 24588999999999988544 4433  567775


Q ss_pred             cC-CCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC-CCceeeeccccccCeEEEEECCCCCEEEEEcCC-
Q psy15995        217 ET-GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP-PFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD-  293 (683)
Q Consensus       217 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-  293 (683)
                      +. +.....+..+...+.+++|+|+++.+++++..++.+++|++. .......+..|...+.+++|+|++++|++++.+ 
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~  238 (297)
T 2ojh_A          159 DIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDA  238 (297)
T ss_dssp             ETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEET
T ss_pred             ECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCC
Confidence            43 344566777888999999999999745555568999999876 555667777788889999999999999888765 


Q ss_pred             ----------CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC
Q psy15995        294 ----------GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK  338 (683)
Q Consensus       294 ----------g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  338 (683)
                                +.|++||+.+++.........|...+.+++|+|+++.|++++.+.
T Consensus       239 ~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          239 DVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             TCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             CCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence                      569999998887644443223777899999999999998887654

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.93  E-value=1.1e-23  Score=203.00  Aligned_cols=299  Identities=10%  Similarity=0.044  Sum_probs=202.1

Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeecccccc--CeEEEEECCCCCEE-EEEcCCCcEEEEeCCCCeeEEeccCCc---ccc
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTKQEHSR--FVQAVRYSPSGSHF-ASAGFDGKVFLYDGASADLVSELGNPA---HKG  317 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~---~~~  317 (683)
                      .+++++.++.|.+||..+++....+.....  .+..++|+|+++.+ +++..++.|.+||+.+++.+..+....   +..
T Consensus         3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~   82 (337)
T 1pby_B            3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK   82 (337)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred             EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence            488999999999999999988877653322  47889999999865 455667899999999998887765322   123


Q ss_pred             CeEEEEEccCCCEEEEEE------------CCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEE
Q psy15995        318 GVYAVAWKPDGTQLLTAS------------GDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY  385 (683)
Q Consensus       318 ~i~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~  385 (683)
                      .+..++|+|++++++++.            .++.|.+||+.+++....+.                              
T Consensus        83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~------------------------------  132 (337)
T 1pby_B           83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE------------------------------  132 (337)
T ss_dssp             CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE------------------------------
T ss_pred             cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe------------------------------
Confidence            677899999999998886            56889999988776543321                              


Q ss_pred             EecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCC
Q psy15995        386 LDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDD  465 (683)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~  465 (683)
                                     ....+.+++|+|++++++++  ++.|.+||+.+++...............+..++..++..+..+
T Consensus       133 ---------------~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~  195 (337)
T 1pby_B          133 ---------------APRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESS  195 (337)
T ss_dssp             ---------------CCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTT
T ss_pred             ---------------CCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCC
Confidence                           12345678899999988888  6889999998877654442211000001111122221111111


Q ss_pred             eEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcE
Q psy15995        466 TIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKV  545 (683)
Q Consensus       466 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i  545 (683)
                      ....+.                                                     .......++.... ......|
T Consensus       196 ~~~~~~-----------------------------------------------------~~~~~~~~~~~~~-~~~~~~v  221 (337)
T 1pby_B          196 GVMATP-----------------------------------------------------FYTARKDIDPADP-TAYRTGL  221 (337)
T ss_dssp             TEEEEE-----------------------------------------------------EEEEBTTSCTTSG-GGEEEEE
T ss_pred             Cceeee-----------------------------------------------------eeccccccccccc-cccccce
Confidence            000000                                                     0000000000000 0001158


Q ss_pred             EEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEE
Q psy15995        546 HIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVAS  625 (683)
Q Consensus       546 ~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~  625 (683)
                      .+||+.+++........+...+..++|+||+++++++  ++.|.+||+.+++......   ....+.+++|+|||++|++
T Consensus       222 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~  296 (337)
T 1pby_B          222 LTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP---LPHSYYSVNVSTDGSTVWL  296 (337)
T ss_dssp             EEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE---CSSCCCEEEECTTSCEEEE
T ss_pred             EEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec---CCCceeeEEECCCCCEEEE
Confidence            8999998876522223355678899999999999988  6999999999988765433   3356789999999999999


Q ss_pred             eecCCcEEEEeCCCCceeeEeec
Q psy15995        626 GSLDTTIIIWSLASPAKHIIIKN  648 (683)
Q Consensus       626 ~~~d~~v~iw~~~~~~~~~~~~~  648 (683)
                      ++.++.|++||+.+++....+..
T Consensus       297 ~~~~~~i~v~d~~~~~~~~~~~~  319 (337)
T 1pby_B          297 GGALGDLAAYDAETLEKKGQVDL  319 (337)
T ss_dssp             ESBSSEEEEEETTTCCEEEEEEC
T ss_pred             EcCCCcEEEEECcCCcEEEEEEc
Confidence            99999999999999988877755

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.93  E-value=5.1e-23  Score=199.79  Aligned_cols=276  Identities=12%  Similarity=0.068  Sum_probs=217.6

Q ss_pred             cccceEEEEECCCCcEEEEecC-------CCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEE
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDI-------SGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYI  156 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  156 (683)
                      ....+..++|+|+|++|++++.       ++.|.+||..+++.+..+...               ..+..++++|+|+++
T Consensus        39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~---------------~~~~~~~~s~dg~~l  103 (353)
T 3vgz_A           39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND---------------LKPFGATINNTTQTL  103 (353)
T ss_dssp             EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES---------------SCCCSEEEETTTTEE
T ss_pred             hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC---------------CCcceEEECCCCCEE
Confidence            4556889999999998887763       567999999998777665443               346788999999855


Q ss_pred             E-eecCCccEEEEeccccceeeeccccccCC-------CeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecC
Q psy15995        157 A-SGDISGKVRIWDTVNKEHILKNEFHPIGG-------PIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQ  228 (683)
Q Consensus       157 ~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-------~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (683)
                      + +...++.|.+||..+++.+..........       .+.+++|+|++++++++....+..+.+|+.++++....+..+
T Consensus       104 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~  183 (353)
T 3vgz_A          104 WFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT  183 (353)
T ss_dssp             EEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC
T ss_pred             EEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC
Confidence            4 55667999999999988665544432111       268899999999998888554555788898889888888767


Q ss_pred             CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc----cccCeEEEEECCCCCEEEEEcC-CCcEEEEeCCC
Q psy15995        229 SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE----HSRFVQAVRYSPSGSHFASAGF-DGKVFLYDGAS  303 (683)
Q Consensus       229 ~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~  303 (683)
                      ...+..++|+|+++. +++++.++.+.+||..+++....+..    +...+..++|+|+++.+++++. ++.|.+||..+
T Consensus       184 ~~~~~~~~~s~dg~~-l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~  262 (353)
T 3vgz_A          184 GKMSTGLALDSEGKR-LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN  262 (353)
T ss_dssp             CTTCCCCEEETTTTE-EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred             CCccceEEECCCCCE-EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence            777899999999996 77788899999999999988776653    5567889999999997776654 58999999999


Q ss_pred             CeeEEeccCCccccCeEEEEEccCCCEEEEEE-CCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCC
Q psy15995        304 ADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS-GDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSG  381 (683)
Q Consensus       304 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g  381 (683)
                      ++.+..+..  ..  ...++|+|++++++++. .++.|.+||..+++.+..+....  ....+.+++++++++++..++
T Consensus       263 ~~~~~~~~~--~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~~~~  335 (353)
T 3vgz_A          263 GNILAKVAA--PE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT--HPNSLALSADGKTLYVSVKQK  335 (353)
T ss_dssp             CCEEEEEEC--SS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS--EEEEEEECTTSCEEEEEEECC
T ss_pred             CcEEEEEEc--CC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC--CCCeEEEcCCCCEEEEEEccc
Confidence            998887764  22  25799999999776666 68999999999998887775543  556778888999888777654

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.92  E-value=4.6e-23  Score=199.26  Aligned_cols=304  Identities=13%  Similarity=0.116  Sum_probs=202.4

Q ss_pred             CeEEEEeeCCCeEEEEcCC-CCce-eeeccccccCeEEEEECCCCCEEEEEcCC-CcEEEEeCC--CCee--EEeccCCc
Q psy15995        242 PFRIITGSEDNTIAVFEGP-PFKF-KMTKQEHSRFVQAVRYSPSGSHFASAGFD-GKVFLYDGA--SADL--VSELGNPA  314 (683)
Q Consensus       242 ~~~l~~~~~d~~i~iw~~~-~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~iw~~~--~~~~--~~~~~~~~  314 (683)
                      ++++++++.++.|++|++. +++. ......+...+.+++|+|++++|++++.+ +.|.+|++.  +++.  +..+.   
T Consensus         5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---   81 (343)
T 1ri6_A            5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA---   81 (343)
T ss_dssp             EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE---
T ss_pred             EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc---
Confidence            3446666889999999985 3322 22223467789999999999988888876 899999987  5543  33333   


Q ss_pred             cccCeEEEEEccCCCEEEEEEC-CCcEEEEECCCC---ceeeEEEecCcceeceEEEEecCCEEEEEe-cCCcEEEEecC
Q psy15995        315 HKGGVYAVAWKPDGTQLLTASG-DKTCKLWDIETK---SVVSEFIMGNQVEDQQVSCLWQGDYLLTVS-LSGFISYLDVN  389 (683)
Q Consensus       315 ~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~i~~~~~~  389 (683)
                      ....+..++|+|+++++++++. ++.|.+||+..+   +....+  ........+.++++++++++++ .++.+.+||+.
T Consensus        82 ~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~  159 (343)
T 1ri6_A           82 LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV--EGLDGCHSANISPDNRTLWVPALKQDRICLFTVS  159 (343)
T ss_dssp             CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE--CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred             cCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc--cCCCCceEEEECCCCCEEEEecCCCCEEEEEEec
Confidence            2237889999999998877765 788999999533   233222  2233466788899999888887 89999999998


Q ss_pred             CCCccee----eeee-ccccEEEEEEeCCCCEEEEEe-CCCcEEEEcCCC--CCcceeccCCCCcceeEEEEeCCeEEEE
Q psy15995        390 NPSTPIR----VIKG-HNKPITALALSPDRGTVFTGS-HDGFITRWNAKT--GENDRVQGAGHGNQINGMKATGELLYTC  461 (683)
Q Consensus       390 ~~~~~~~----~~~~-~~~~v~~~~~~~~~~~l~~~~-~dg~i~~w~~~~--~~~~~~~~~~~~~~v~~~~~~~~~l~~~  461 (683)
                      .......    .... ....+..++|+|+++++++++ .++.|.+|++..  ++......                    
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~--------------------  219 (343)
T 1ri6_A          160 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQT--------------------  219 (343)
T ss_dssp             TTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEE--------------------
T ss_pred             CCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEee--------------------
Confidence            6333221    2222 344788999999999776554 789999999854  22110000                    


Q ss_pred             EcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEE-c
Q psy15995        462 GIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVG-G  540 (683)
Q Consensus       462 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~  540 (683)
                             +-.+...                                          ......+..++++|++++|+++ .
T Consensus       220 -------~~~~~~~------------------------------------------~~~~~~~~~i~~s~dg~~l~v~~~  250 (343)
T 1ri6_A          220 -------LDMMPEN------------------------------------------FSDTRWAADIHITPDGRHLYACDR  250 (343)
T ss_dssp             -------EECSCTT------------------------------------------CCSCCCEEEEEECTTSSEEEEEET
T ss_pred             -------ccccCcc------------------------------------------ccccCCccceEECCCCCEEEEEec
Confidence                   0000000                                          0001234679999999888754 5


Q ss_pred             CCCcEEEEEcC--CCccCcceeecCCcCeeEEEECCCCCEEEEEe-CCCeEEEEEC--CCCccccccceeeecccEEEEE
Q psy15995        541 ADSKVHIYELN--NKSLSPKAELDHLGPVTDCSFSPSNEYLVASD-AHRKVVLYRV--PDFELAHNKEWGFHSAKVNCVA  615 (683)
Q Consensus       541 ~dg~i~i~d~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~--~~~~~~~~~~~~~h~~~v~~~~  615 (683)
                      .++.|.+|++.  ++.............+..++|+|++++|++++ .++.+.+|++  .++++....... ......+++
T Consensus       251 ~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~-~g~~p~~i~  329 (343)
T 1ri6_A          251 TASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYA-VGQGPMWVV  329 (343)
T ss_dssp             TTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEE-CSSSCCEEE
T ss_pred             CCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccc-cCCCCeeEE
Confidence            78999999998  33332222233334488999999999988887 6899999954  466554333332 224566777


Q ss_pred             ecCCC
Q psy15995        616 WSPDS  620 (683)
Q Consensus       616 ~s~d~  620 (683)
                      |.|+.
T Consensus       330 ~~~~~  334 (343)
T 1ri6_A          330 VNAHE  334 (343)
T ss_dssp             EEEEC
T ss_pred             EEccc
Confidence            77654

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.92  E-value=2.7e-23  Score=196.41  Aligned_cols=260  Identities=13%  Similarity=0.097  Sum_probs=190.4

Q ss_pred             EecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccc-cceeeecc
Q psy15995        102 SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVN-KEHILKNE  180 (683)
Q Consensus       102 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~  180 (683)
                      +++.|++|++||+.+++..... .+.              ..+.+++|+|+|++|++++ ++.|.+||+.+ ++......
T Consensus        17 ~~~~~~~i~~~d~~~~~~~~~~-~~~--------------~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~   80 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTRKMRVVW-QTP--------------ELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDT   80 (297)
T ss_dssp             -CCCCEEEEEEETTTTEEEEEE-EES--------------SCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCC
T ss_pred             CCCcceeEEEEeCCCCceeeec-cCC--------------cceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecc
Confidence            3567889999999988654322 222              6789999999999999986 78999999998 76443221


Q ss_pred             ccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc--CCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEc
Q psy15995        181 FHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE--TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFE  258 (683)
Q Consensus       181 ~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~  258 (683)
                       ......+.+++|+||+++++++....+....+|.++  .+. ...+..+. .+..++|+|+++.+++++..++.+++|+
T Consensus        81 -~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~  157 (297)
T 2ojh_A           81 -GFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYS  157 (297)
T ss_dssp             -TTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEE
T ss_pred             -ccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEE
Confidence             222467899999999999999984432234555554  333 33444443 4899999999997566888999999998


Q ss_pred             CCC-CceeeeccccccCeEEEEECCCCCEEEEEc-CCCcEEEEeCC-CCeeEEeccCCccccCeEEEEEccCCCEEEEEE
Q psy15995        259 GPP-FKFKMTKQEHSRFVQAVRYSPSGSHFASAG-FDGKVFLYDGA-SADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS  335 (683)
Q Consensus       259 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  335 (683)
                      ++. ......+..+...+.+++|+|+++.|+.++ .++.+.+|++. .+.....+..  +...+..++|+|++++|++++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~  235 (297)
T 2ojh_A          158 MDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD--SAYGDWFPHPSPSGDKVVFVS  235 (297)
T ss_dssp             EETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC--CSEEEEEEEECTTSSEEEEEE
T ss_pred             EECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec--CCcccCCeEECCCCCEEEEEE
Confidence            532 233456667888899999999999887665 58899999875 4455555543  677899999999999998887


Q ss_pred             CC-----------CcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeecccc
Q psy15995        336 GD-----------KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKP  404 (683)
Q Consensus       336 ~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~  404 (683)
                      .+           +.|.+||+.+++....                                          ..+.+|...
T Consensus       236 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~------------------------------------------~~~~~~~~~  273 (297)
T 2ojh_A          236 YDADVFDHPRDLDVRVQLMDMDGGNVETL------------------------------------------FDLFGGQGT  273 (297)
T ss_dssp             EETTCCSCCSSEEEEEEEEETTSCSCEEE------------------------------------------EEEEESTTT
T ss_pred             cCCCCCcccccCceEEEEEecCCCCceee------------------------------------------eccCCCCcc
Confidence            65           4588888876643221                                          223456777


Q ss_pred             EEEEEEeCCCCEEEEEeCCC
Q psy15995        405 ITALALSPDRGTVFTGSHDG  424 (683)
Q Consensus       405 v~~~~~~~~~~~l~~~~~dg  424 (683)
                      +.+++|+|++++|++++.+.
T Consensus       274 ~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          274 MNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             SCSCCBCTTSSEEEEEEECC
T ss_pred             cccceECCCCCEEEEEEecc
Confidence            88899999999988877653

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.91  E-value=1.7e-22  Score=195.67  Aligned_cols=282  Identities=10%  Similarity=0.053  Sum_probs=202.5

Q ss_pred             EEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcc-cceEEEEECCCCcEEE-EecCCCCEEEEeCCCccccccccc
Q psy15995         49 VLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHS-CAVNVAKYSPSGFYIA-SGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        49 ~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~-~~v~~~~~s~d~~~la-s~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      .+++++++++++++ .++.|.+||..+++.+..+..+. ..+..++|+|||++++ +...++.|.+||+.+++.+..+..
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~   83 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL   83 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence            35678888888876 57899999999998887776443 2578999999998664 556788999999999877655543


Q ss_pred             ccCCCCcccceeeeeecceeeeEeeccceEEEeecCC------------ccEEEEeccccceeeeccccccCCCeeEEEE
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS------------GKVRIWDTVNKEHILKNEFHPIGGPIKDIAW  193 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~  193 (683)
                      .....        .....+..++|+|||++|++++.+            +.|.+||+.+++.........+...+.+++|
T Consensus        84 ~~~~~--------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~  155 (349)
T 1jmx_B           84 SSVPG--------EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRA  155 (349)
T ss_dssp             CCSTT--------EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEE
T ss_pred             ccccc--------cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeE
Confidence            21000        001347789999999999998865            8999999998654333222233456889999


Q ss_pred             cCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCc------------------------CeEEEEeecCCCe------
Q psy15995        194 SPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSK------------------------PINSCDFKPSRPF------  243 (683)
Q Consensus       194 s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~v~~~~~~~~~~~------  243 (683)
                      +||++ +++.+.+    +.+|+..+++....+..+..                        ....+++++++..      
T Consensus       156 s~dg~-l~~~~~~----i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  230 (349)
T 1jmx_B          156 ADDGS-LYVAGPD----IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD  230 (349)
T ss_dssp             CTTSC-EEEESSS----EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCE
T ss_pred             CCCCc-EEEccCc----EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccc
Confidence            99999 6664433    77888888887766654320                        2344566554321      


Q ss_pred             ----EEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECC-CCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccC
Q psy15995        244 ----RIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSP-SGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGG  318 (683)
Q Consensus       244 ----~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~  318 (683)
                          .+.....++.+++|+.         ..+...+..++++| ++++++++  ++.|.+||+.+++.+..+..   ...
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~---~~~  296 (349)
T 1jmx_B          231 LLYGYLSVDLKTGKTHTQEF---------ADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL---DHT  296 (349)
T ss_dssp             EEEEEEEEETTTCCEEEEEE---------EECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC---SSC
T ss_pred             cceeEEEEeccCCcEEeccc---------ccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC---CCC
Confidence                1112233344444443         22556788999999 99998888  78999999999998877753   345


Q ss_pred             eEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEec
Q psy15995        319 VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMG  357 (683)
Q Consensus       319 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  357 (683)
                      +.+++|+|++++|++++.++.|.+||+.+++.+..+...
T Consensus       297 ~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~  335 (349)
T 1jmx_B          297 YYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP  335 (349)
T ss_dssp             CCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred             ccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence            779999999999998888999999999999888777544

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.90  E-value=4.8e-22  Score=211.59  Aligned_cols=364  Identities=12%  Similarity=0.053  Sum_probs=234.0

Q ss_pred             CeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccc-----eEEEEECCCCcEEEEecCC---------CCEEE
Q psy15995         46 QPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCA-----VNVAKYSPSGFYIASGDIS---------GKVRI  111 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~-----v~~~~~s~d~~~las~~~d---------g~i~i  111 (683)
                      ....++|+|||++++.+ ++.|.+||+.+++....+.+|...     ...++|||||++|+.++.+         +.+.+
T Consensus        18 ~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~   96 (740)
T 4a5s_A           18 KLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI   96 (740)
T ss_dssp             CCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred             cccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence            45578899999999887 899999999999987777877643     2447899999999998875         56779


Q ss_pred             EeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCC-----
Q psy15995        112 WDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGG-----  186 (683)
Q Consensus       112 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-----  186 (683)
                      ||+.+++... +..++              ..+...+|||||+.||.+. ++.|++|++.+++... ....+...     
T Consensus        97 ~d~~~~~~~~-l~~~~--------------~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g  159 (740)
T 4a5s_A           97 YDLNKRQLIT-EERIP--------------NNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYR-ITWTGKEDIIYNG  159 (740)
T ss_dssp             EETTTTEECC-SSCCC--------------TTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEE-CCSCCBTTTEEES
T ss_pred             EECCCCcEEE-cccCC--------------CcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEE-EcCCCCccceecC
Confidence            9999986543 32222              4678899999999999884 6899999998876432 22222222     


Q ss_pred             ------------CeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeE
Q psy15995        187 ------------PIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTI  254 (683)
Q Consensus       187 ------------~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i  254 (683)
                                  ....+.|||||+.|+....+... +.+|........   ..+...+..+.+.+.|..     .....|
T Consensus       160 ~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~-v~~~~~~~~~~~---~~~~~~~~~~~yp~~G~~-----~~~~~l  230 (740)
T 4a5s_A          160 ITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTE-VPLIEYSFYSDE---SLQYPKTVRVPYPKAGAV-----NPTVKF  230 (740)
T ss_dssp             BCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTT-CCEEEEEECCST---TCSSCEEEEEECCBTTSC-----CCEEEE
T ss_pred             cccccccchhcCCCcceEECCCCCEEEEEEEcccC-CceEEEEeecCC---CCCCCcceeecCCCCcCc-----CCeeEE
Confidence                        22458999999999988754332 122222111000   034556677777777642     223368


Q ss_pred             EEEcCCC---C---ceeeecc-----ccccCeEEEEECCCCCEEEEEcC----CCcEEEEeCCCCe----eEEeccC--C
Q psy15995        255 AVFEGPP---F---KFKMTKQ-----EHSRFVQAVRYSPSGSHFASAGF----DGKVFLYDGASAD----LVSELGN--P  313 (683)
Q Consensus       255 ~iw~~~~---~---~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iw~~~~~~----~~~~~~~--~  313 (683)
                      ++||+.+   +   +......     +|...+..++|+|||+.++....    +..|++||+.+++    +......  .
T Consensus       231 ~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~  310 (740)
T 4a5s_A          231 FVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEM  310 (740)
T ss_dssp             EEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEE
T ss_pred             EEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeec
Confidence            9999988   7   3332221     37788999999999996665532    3379999998887    2221110  1


Q ss_pred             ccccCeE-----EEEEccCCCEEE-EEEC-C--CcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecC----
Q psy15995        314 AHKGGVY-----AVAWKPDGTQLL-TASG-D--KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS----  380 (683)
Q Consensus       314 ~~~~~i~-----~~~~~~~~~~l~-~~~~-d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----  380 (683)
                      .+...+.     ..+|+|||+.++ ..+. +  ..|.+||+.+++... +..+ ....... ..++++.++..+..    
T Consensus       311 ~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g-~~~v~~~-~~~d~~~i~f~~~~~~~~  387 (740)
T 4a5s_A          311 STTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKG-TWEVIGI-EALTSDYLYYISNEYKGM  387 (740)
T ss_dssp             CSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCS-SSCEEEE-EEECSSEEEEEESCGGGC
T ss_pred             cCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-cccC-CEEEEEE-EEEeCCEEEEEEecCCCC
Confidence            2443333     688999999877 6653 3  358888888765432 2222 2222221 22556666655543    


Q ss_pred             -CcEEEEecCCCCccee-eee----eccccEEEEEEeCCCCEEEEEeCC---CcEEEEcCCCCCccee
Q psy15995        381 -GFISYLDVNNPSTPIR-VIK----GHNKPITALALSPDRGTVFTGSHD---GFITRWNAKTGENDRV  439 (683)
Q Consensus       381 -g~i~~~~~~~~~~~~~-~~~----~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~w~~~~~~~~~~  439 (683)
                       +...+|.+........ .+.    +.........|+|++++++.....   ..+.+++..+++....
T Consensus       388 ~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~~  455 (740)
T 4a5s_A          388 PGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRV  455 (740)
T ss_dssp             TTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEE
T ss_pred             CceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEEEE
Confidence             3455555443222111 222    123567889999999988755443   3678888776654433

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.90  E-value=2.3e-22  Score=208.57  Aligned_cols=271  Identities=12%  Similarity=0.048  Sum_probs=198.5

Q ss_pred             CCCeEEEeeCCCCCeEEEec--CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecC---CCCEEEEeCCC--
Q psy15995         44 RGQPIVLGGDPKGKNFLYTN--GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDI---SGKVRIWDTVN--  116 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~~--~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~---dg~i~iwd~~~--  116 (683)
                      ...+..++|||||++||+++  ++.+.||++++++..+....+...+..++|||| +.+++++.   +....+|.+..  
T Consensus        21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~   99 (582)
T 3o4h_A           21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR   99 (582)
T ss_dssp             HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred             ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence            44688999999999999873  789999999877765544334479999999999 88887765   45566765543  


Q ss_pred             cccccccccccCCCCcccceeeeeecceeeeEeeccce--EEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEc
Q psy15995        117 KEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF--YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWS  194 (683)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s  194 (683)
                      ......+...               ......+|+|||+  .+++++.+ .+.+||+.+++......   +..  .+++|+
T Consensus       100 ~g~~~~l~~~---------------~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~---~~~--~~~~~s  158 (582)
T 3o4h_A          100 PGEEQRLEAV---------------KPMRILSGVDTGEAVVFTGATED-RVALYALDGGGLRELAR---LPG--FGFVSD  158 (582)
T ss_dssp             TTCCEECTTS---------------CSBEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEE---ESS--CEEEEE
T ss_pred             CCccccccCC---------------CCceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeec---CCC--ceEEEC
Confidence            2111111111               2233568888885  44455544 45599999886543322   112  899999


Q ss_pred             CCCCeEEEEecCCc--eEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCC--eEEEEcCCCCceeeeccc
Q psy15995        195 PDNQRMVVVGEGRE--RFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDN--TIAVFEGPPFKFKMTKQE  270 (683)
Q Consensus       195 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~  270 (683)
                      |||+++++++.+..  ..+.+|+.++++. ..+..|...+..++|+|||+. |+++..++  .|++||..+++.. .+..
T Consensus       159 pDG~~la~~~~~~~~~~~i~~~d~~~g~~-~~l~~~~~~~~~~~~SpDG~~-l~~~~~~~~~~i~~~d~~~~~~~-~~~~  235 (582)
T 3o4h_A          159 IRGDLIAGLGFFGGGRVSLFTSNLSSGGL-RVFDSGEGSFSSASISPGMKV-TAGLETAREARLVTVDPRDGSVE-DLEL  235 (582)
T ss_dssp             EETTEEEEEEEEETTEEEEEEEETTTCCC-EEECCSSCEEEEEEECTTSCE-EEEEECSSCEEEEEECTTTCCEE-ECCC
T ss_pred             CCCCEEEEEEEcCCCCeEEEEEcCCCCCc-eEeecCCCccccceECCCCCE-EEEccCCCeeEEEEEcCCCCcEE-EccC
Confidence            99999998775522  3355666666654 477889999999999999996 77888888  8999999998877 7777


Q ss_pred             cccCeEEEE--------ECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCc---
Q psy15995        271 HSRFVQAVR--------YSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKT---  339 (683)
Q Consensus       271 ~~~~v~~~~--------~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~---  339 (683)
                      |...+..++        |+|||..+++++.++.+++|++  ++....     ..+.+.+++|+ +++.+++++.+..   
T Consensus       236 ~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~-----~~~~v~~~~~s-dg~~l~~~s~~~~p~~  307 (582)
T 3o4h_A          236 PSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEA-----PQGNHGRVVLW-RGKLVTSHTSLSTPPR  307 (582)
T ss_dssp             SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECC-----CSSEEEEEEEE-TTEEEEEEEETTEEEE
T ss_pred             CCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeecc-----CCCceEEEEec-CCEEEEEEcCCCCCCe
Confidence            777777777        9999998899999999999998  665542     34678899999 9998888877644   


Q ss_pred             EEEEECCC
Q psy15995        340 CKLWDIET  347 (683)
Q Consensus       340 i~iwd~~~  347 (683)
                      +.+||...
T Consensus       308 l~~~d~~~  315 (582)
T 3o4h_A          308 IVSLPSGE  315 (582)
T ss_dssp             EEEETTCC
T ss_pred             EEEEcCCC
Confidence            66666553

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.90  E-value=2.1e-22  Score=208.85  Aligned_cols=272  Identities=10%  Similarity=0.017  Sum_probs=197.6

Q ss_pred             cccceEEEEECCCCcEEEEecC-CCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC-
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDI-SGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI-  161 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-  161 (683)
                      +..+|.+++|+|||++||+++. ||+++||++.+++... +..+.             ...+..++|+|| +.+++++. 
T Consensus        20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~-------------~~~~~~~~~spd-~~l~~~~~~   84 (582)
T 3o4h_A           20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREP-------------INSVLDPHYGVG-RVILVRDVS   84 (582)
T ss_dssp             HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSC-------------CSEECEECTTCS-EEEEEEECS
T ss_pred             hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eeccc-------------ccccccccCCCC-eEEEEeccC
Confidence            3668999999999999999876 9999999986654332 22221             036788999999 77776664 


Q ss_pred             --CccEEEEeccc---cceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEE
Q psy15995        162 --SGKVRIWDTVN---KEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCD  236 (683)
Q Consensus       162 --d~~i~iwd~~~---~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  236 (683)
                        +....+|.+..   +...   .+... ......+|+||++.++.++...+.. .+|+.++++.......+.   .+++
T Consensus        85 ~g~~~~~l~~~~~~~~g~~~---~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~-~l~d~~~g~~~~l~~~~~---~~~~  156 (582)
T 3o4h_A           85 KGAEQHALFKVNTSRPGEEQ---RLEAV-KPMRILSGVDTGEAVVFTGATEDRV-ALYALDGGGLRELARLPG---FGFV  156 (582)
T ss_dssp             TTSCCEEEEEEETTSTTCCE---ECTTS-CSBEEEEEEECSSCEEEEEECSSCE-EEEEEETTEEEEEEEESS---CEEE
T ss_pred             CCCcceEEEEEeccCCCccc---cccCC-CCceeeeeCCCCCeEEEEecCCCCc-eEEEccCCcEEEeecCCC---ceEE
Confidence              45566665543   2221   11111 2345679999998766665544443 388888876555444333   8999


Q ss_pred             eecCCCeEEEEeeCC----CeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCC--cEEEEeCCCCeeEEec
Q psy15995        237 FKPSRPFRIITGSED----NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDG--KVFLYDGASADLVSEL  310 (683)
Q Consensus       237 ~~~~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~  310 (683)
                      |+|+|+. +++++.+    +.|++||+.+++.. .+..|...+..++|+|||+.|+++..++  .|++||+.+++.. .+
T Consensus       157 ~spDG~~-la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~  233 (582)
T 3o4h_A          157 SDIRGDL-IAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL  233 (582)
T ss_dssp             EEEETTE-EEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC
T ss_pred             ECCCCCE-EEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec
Confidence            9999996 7766666    78999998888765 5677888899999999999999888888  8999999998877 54


Q ss_pred             cCCccccCeEEEE--------EccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCc
Q psy15995        311 GNPAHKGGVYAVA--------WKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGF  382 (683)
Q Consensus       311 ~~~~~~~~i~~~~--------~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~  382 (683)
                      ..  +...+..++        |+|||..+++++.++.+++|++  ++...                              
T Consensus       234 ~~--~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~------------------------------  279 (582)
T 3o4h_A          234 EL--PSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE------------------------------  279 (582)
T ss_dssp             CC--SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC------------------------------
T ss_pred             cC--CCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec------------------------------
Confidence            43  666666666        9999988899999999999998  43321                              


Q ss_pred             EEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCC---cEEEEcCCC
Q psy15995        383 ISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDG---FITRWNAKT  433 (683)
Q Consensus       383 i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~w~~~~  433 (683)
                                       .+.+.+.+++|+ +++.+++++.+.   .+.+||..+
T Consensus       280 -----------------~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~  315 (582)
T 3o4h_A          280 -----------------APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE  315 (582)
T ss_dssp             -----------------CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred             -----------------cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence                             122456788888 888888877764   477777654

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.90  E-value=8.8e-22  Score=190.12  Aligned_cols=258  Identities=14%  Similarity=0.113  Sum_probs=178.3

Q ss_pred             CCeEEEeeCCCCCeEEEec---CCeEEEEeCCCCc--ccccccCcccceEEEEECCCCcEEEEec-CCCCEEEEeCCCc-
Q psy15995         45 GQPIVLGGDPKGKNFLYTN---GNSVIIRNIENPA--ISDIYTEHSCAVNVAKYSPSGFYIASGD-ISGKVRIWDTVNK-  117 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~---~~~i~v~~~~~~~--~~~~~~~h~~~v~~~~~s~d~~~las~~-~dg~i~iwd~~~~-  117 (683)
                      ..+..++|||||++++...   ++.|.+|++++++  .+..+..|...+..++|+|||++|++++ .++.|.+|++... 
T Consensus        40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g  119 (347)
T 3hfq_A           40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADG  119 (347)
T ss_dssp             SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTS
T ss_pred             CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC
Confidence            4667799999999444443   4799999998776  3444456788899999999999888877 7789999999632 


Q ss_pred             c--cccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEecc-ccceeeeccccc-cCCCeeEEEE
Q psy15995        118 E--HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTV-NKEHILKNEFHP-IGGPIKDIAW  193 (683)
Q Consensus       118 ~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~-~~~~i~~~~~  193 (683)
                      .  .+..+.....+ +.    .......+.+++|+|||+.+++...++.|.+|++. +++......... ....+..++|
T Consensus       120 ~~~~~~~~~~~~~~-p~----~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~  194 (347)
T 3hfq_A          120 ALTLTDTVQHSGHG-PR----PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF  194 (347)
T ss_dssp             CEEEEEEEECCCCC-SS----TTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred             CeeecceeecCCCC-CC----ccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence            2  22222111100 00    00111347789999999977777778999999998 454322222121 2236788999


Q ss_pred             cCCCCeEEEEecCCceEEEEEEccC--CCc--eeeeecCC------cCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC--
Q psy15995        194 SPDNQRMVVVGEGRERFGHVFMSET--GTS--VGEISGQS------KPINSCDFKPSRPFRIITGSEDNTIAVFEGPP--  261 (683)
Q Consensus       194 s~~~~~l~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~------~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~--  261 (683)
                      +|||++++++..... .+.+|+++.  ++.  ...+....      ..+..++|+|++++++++...++.|.+|++..  
T Consensus       195 spdg~~l~v~~~~~~-~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g  273 (347)
T 3hfq_A          195 SPDGQYAFLAGELSS-QIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG  273 (347)
T ss_dssp             CTTSSEEEEEETTTT-EEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG
T ss_pred             CCCCCEEEEEeCCCC-EEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC
Confidence            999998888765543 357777764  432  22333322      35889999999997567777899999999873  


Q ss_pred             -CceeeeccccccCeEEEEECCCCCEEEEEcC-CCcEEEE--eCCCCeeEE
Q psy15995        262 -FKFKMTKQEHSRFVQAVRYSPSGSHFASAGF-DGKVFLY--DGASADLVS  308 (683)
Q Consensus       262 -~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw--~~~~~~~~~  308 (683)
                       .+.+..+..+...+..++|+|+|++|++++. ++.|.+|  |.++++...
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~  324 (347)
T 3hfq_A          274 HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL  324 (347)
T ss_dssp             CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred             cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence             3445555556667899999999998888765 4899999  555666543

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.90  E-value=3.7e-21  Score=185.70  Aligned_cols=269  Identities=13%  Similarity=0.148  Sum_probs=180.0

Q ss_pred             CCeEEEEeC--CCCcccc-cccCcccceEEEEECCCCcEEEEecC---CCCEEEEeCCCccc--ccccccccCCCCcccc
Q psy15995         64 GNSVIIRNI--ENPAISD-IYTEHSCAVNVAKYSPSGFYIASGDI---SGKVRIWDTVNKEH--ILKNEFHPIGGPIKDI  135 (683)
Q Consensus        64 ~~~i~v~~~--~~~~~~~-~~~~h~~~v~~~~~s~d~~~las~~~---dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~  135 (683)
                      ++.|.+|.+  ++++... ....+...+..++|+|||+ |++++.   ++.|.+||+.+++.  +..+..+         
T Consensus        15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~---------   84 (347)
T 3hfq_A           15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAP---------   84 (347)
T ss_dssp             CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEE---------
T ss_pred             CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecC---------
Confidence            345666655  4555433 2345667788999999999 555443   68999999976642  2111111         


Q ss_pred             eeeeeecceeeeEeeccceEEEeec-CCccEEEEeccc-cceeeeccccc---------cCCCeeEEEEcCCCCeEEEEe
Q psy15995        136 GTLLSLTSIRNILVLSIGFYIASGD-ISGKVRIWDTVN-KEHILKNEFHP---------IGGPIKDIAWSPDNQRMVVVG  204 (683)
Q Consensus       136 ~~~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~iwd~~~-~~~~~~~~~~~---------~~~~i~~~~~s~~~~~l~~~~  204 (683)
                           ...+..++|+|||++|++++ .++.|.+|++.. +..........         ....+.+++|+|||+ ++++.
T Consensus        85 -----~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~  158 (347)
T 3hfq_A           85 -----GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVID  158 (347)
T ss_dssp             -----SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEE
T ss_pred             -----CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEe
Confidence                 25678899999999888877 789999999963 32211111111         112478899999999 55554


Q ss_pred             cCCceEEEEEEcc-CCCcee--eeecC-CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC--Ccee--eeccccc----
Q psy15995        205 EGRERFGHVFMSE-TGTSVG--EISGQ-SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP--FKFK--MTKQEHS----  272 (683)
Q Consensus       205 ~~~~~~~~~~~~~-~~~~~~--~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~--~~~~--~~~~~~~----  272 (683)
                      .... .+.+|+.+ .++...  .+..+ ...+..++|+|++++++++...++.+.+|++..  ++..  ..+....    
T Consensus       159 ~~~~-~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~  237 (347)
T 3hfq_A          159 LGSD-KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYT  237 (347)
T ss_dssp             TTTT-EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCC
T ss_pred             CCCC-EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCC
Confidence            4333 36788877 444322  22222 336788999999997666677889999999764  4432  2222222    


Q ss_pred             --cCeEEEEECCCCCEEE-EEcCCCcEEEEeCCCC---eeEEeccCCccccCeEEEEEccCCCEEEEEECC-CcEEEE--
Q psy15995        273 --RFVQAVRYSPSGSHFA-SAGFDGKVFLYDGASA---DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD-KTCKLW--  343 (683)
Q Consensus       273 --~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g~i~iw--  343 (683)
                        ..+..++|+|+|++|+ +...++.|.+|++...   +.+..+..  +...+..++|+||+++|++++.+ +.+.+|  
T Consensus       238 ~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~  315 (347)
T 3hfq_A          238 AHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST--EGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR  315 (347)
T ss_dssp             SCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC--SSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             CCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec--CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence              4588999999999775 4555899999998732   34444432  45668899999999998888764 889999  


Q ss_pred             ECCCCcee
Q psy15995        344 DIETKSVV  351 (683)
Q Consensus       344 d~~~~~~~  351 (683)
                      |..+++..
T Consensus       316 d~~tg~l~  323 (347)
T 3hfq_A          316 DLTSGKLS  323 (347)
T ss_dssp             CTTTCCEE
T ss_pred             eCCCCeEE
Confidence            55556554

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.89  E-value=3.5e-21  Score=186.52  Aligned_cols=299  Identities=13%  Similarity=0.078  Sum_probs=202.6

Q ss_pred             EEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEE-ECCCcEEEEECCCCceeeEEE
Q psy15995        277 AVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA-SGDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       277 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~  355 (683)
                      .++++++++++++++.++.|++||..+++.+..+... ....+..++|+|+++.++++ ..++.|.+||+.+++....+.
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~   82 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMP-DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN   82 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECS-SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecC-CCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence            3567888889999999999999999999988877641 11257889999999876554 468899999999998877766


Q ss_pred             ecC-----cceeceEEEEecCCEEEEEecC------------CcEEEEecCCCCc--ceeeeeeccccEEEEEEeCCCCE
Q psy15995        356 MGN-----QVEDQQVSCLWQGDYLLTVSLS------------GFISYLDVNNPST--PIRVIKGHNKPITALALSPDRGT  416 (683)
Q Consensus       356 ~~~-----~~~~~~~~~~~~~~~l~~~~~~------------g~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~  416 (683)
                      ...     ......+.+++++++++++..+            +.+.+||+..+..  .+.... +...+.+++|+|+++ 
T Consensus        83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-  160 (349)
T 1jmx_B           83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-  160 (349)
T ss_dssp             SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-
T ss_pred             cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-
Confidence            433     2335678899999999998865            8999999976322  122233 344688999999999 


Q ss_pred             EEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCC
Q psy15995        417 VFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDEN  496 (683)
Q Consensus       417 l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (683)
                      +++++.  .|.+||+.+++.................           ...+.+|......            .       
T Consensus       161 l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~------------~-------  208 (349)
T 1jmx_B          161 LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSA-----------PDVLYFWPHQSPR------------H-------  208 (349)
T ss_dssp             EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCC-----------CBCCCCCCCCCTT------------C-------
T ss_pred             EEEccC--cEEEEeCCCCceeccccccccCCccccC-----------ccceeeecCCCcc------------e-------
Confidence            666544  4999999988766544322100000000           0000011100000            0       


Q ss_pred             eEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCC-----------CEEEEEcCCCcEEEEEcCCCccCcceeecCCc
Q psy15995        497 TLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEH-----------GLVAVGGADSKVHIYELNNKSLSPKAELDHLG  565 (683)
Q Consensus       497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~  565 (683)
                       ..                      ..+..+++++++           .++.....++.+.+++...          +..
T Consensus       209 -~~----------------------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~  255 (349)
T 1jmx_B          209 -EF----------------------SMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD----------LTE  255 (349)
T ss_dssp             -EE----------------------EEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEE----------CSS
T ss_pred             -eE----------------------EeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccccc----------CCC
Confidence             00                      001223333332           1233444456666665522          445


Q ss_pred             CeeEEEECC-CCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceee
Q psy15995        566 PVTDCSFSP-SNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHI  644 (683)
Q Consensus       566 ~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~  644 (683)
                      .+..++|+| |+++++++  ++.|.+||+.+++......   ....+.+++|+||+++|++++.++.|++||+.+++.+.
T Consensus       256 ~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~  330 (349)
T 1jmx_B          256 LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN---LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVK  330 (349)
T ss_dssp             CEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE---CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEE
T ss_pred             cceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc---CCCCccceEECCCCCEEEEecCCCeEEEEeccccceee
Confidence            688999999 99999988  8899999999988765443   33457899999999999998889999999999998887


Q ss_pred             Eeec
Q psy15995        645 IIKN  648 (683)
Q Consensus       645 ~~~~  648 (683)
                      .+..
T Consensus       331 ~~~~  334 (349)
T 1jmx_B          331 NIKL  334 (349)
T ss_dssp             EEEC
T ss_pred             eeec
Confidence            7755

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.89  E-value=8.2e-21  Score=184.36  Aligned_cols=270  Identities=12%  Similarity=0.094  Sum_probs=179.0

Q ss_pred             CCeEEEEeC--CCCcccccccCcccceEEEEECCCCcEEEEecCC----CCEEEEeCCCc--ccccccccccCCCCcccc
Q psy15995         64 GNSVIIRNI--ENPAISDIYTEHSCAVNVAKYSPSGFYIASGDIS----GKVRIWDTVNK--EHILKNEFHPIGGPIKDI  135 (683)
Q Consensus        64 ~~~i~v~~~--~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~d----g~i~iwd~~~~--~~~~~~~~~~~~~~~~~~  135 (683)
                      ++.|.+|.+  ++++.......|...+..++|+|||++|++++.+    +.|.+|++...  +.........        
T Consensus        26 ~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~--------   97 (361)
T 3scy_A           26 SKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKT--------   97 (361)
T ss_dssp             CCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEEC--------
T ss_pred             CCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEecc--------
Confidence            457888866  4565433222277888999999999999988875    78999998653  2211111110        


Q ss_pred             eeeeeecceeeeEeeccceEEEeec-CCccEEEEeccccceeeecc----cc--------ccCCCeeEEEEcCCCCeEEE
Q psy15995        136 GTLLSLTSIRNILVLSIGFYIASGD-ISGKVRIWDTVNKEHILKNE----FH--------PIGGPIKDIAWSPDNQRMVV  202 (683)
Q Consensus       136 ~~~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~----~~--------~~~~~i~~~~~s~~~~~l~~  202 (683)
                          .......+++  ++++|++++ .++.|.+|++.....+....    ..        .....+.+++|+|||+++++
T Consensus        98 ----~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~  171 (361)
T 3scy_A           98 ----MGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLA  171 (361)
T ss_dssp             ----SSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEE
T ss_pred             ----CCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEE
Confidence                0133455666  777666655 68899999997543321111    00        11234578999999998888


Q ss_pred             EecCCceEEEEEEccCCCc------e-------eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee--ee
Q psy15995        203 VGEGRERFGHVFMSETGTS------V-------GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK--MT  267 (683)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~--~~  267 (683)
                      +..... .+.+|+++....      +       .....+...+..++|+|++++++++...++.|.+|++.+++..  ..
T Consensus       172 ~~~~~~-~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~  250 (361)
T 3scy_A          172 DDLGTD-QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT  250 (361)
T ss_dssp             EETTTT-EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE
T ss_pred             EeCCCC-EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE
Confidence            775443 367777765431      1       1123345668899999999974555557999999998876542  22


Q ss_pred             ---ccccccCeEEEEECCCCCEEEEEcCC--CcEEEEeCC--CCe--eEEeccCCccccCeEEEEEccCCCEEEEEE-CC
Q psy15995        268 ---KQEHSRFVQAVRYSPSGSHFASAGFD--GKVFLYDGA--SAD--LVSELGNPAHKGGVYAVAWKPDGTQLLTAS-GD  337 (683)
Q Consensus       268 ---~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iw~~~--~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d  337 (683)
                         ...+......++|+|||++|+++..+  +.|.+|++.  +++  .+..+.   ....+.+++|+|++++|++++ .+
T Consensus       251 ~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~---~g~~~~~~~~spdg~~l~~~~~~~  327 (361)
T 3scy_A          251 VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL---TGIHPRNFIITPNGKYLLVACRDT  327 (361)
T ss_dssp             EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE---CSSCCCEEEECTTSCEEEEEETTT
T ss_pred             EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec---CCCCCceEEECCCCCEEEEEECCC
Confidence               22334557899999999988776654  889999985  444  333332   245678999999999998887 57


Q ss_pred             CcEEEEEC--CCCcee
Q psy15995        338 KTCKLWDI--ETKSVV  351 (683)
Q Consensus       338 g~i~iwd~--~~~~~~  351 (683)
                      +.+.+|++  .+++..
T Consensus       328 ~~v~v~~~d~~~g~~~  343 (361)
T 3scy_A          328 NVIQIFERDQATGLLT  343 (361)
T ss_dssp             TEEEEEEECTTTCCEE
T ss_pred             CCEEEEEEECCCCcEe
Confidence            88999654  455543

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.89  E-value=1.7e-21  Score=207.82  Aligned_cols=334  Identities=10%  Similarity=0.054  Sum_probs=222.2

Q ss_pred             EEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecccccc---CeEEEEECCCCCEEEEEcC---------CCcEEEEe
Q psy15995        233 NSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSR---FVQAVRYSPSGSHFASAGF---------DGKVFLYD  300 (683)
Q Consensus       233 ~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------dg~i~iw~  300 (683)
                      ..++|+|++.  ++..+.|+.|++||..+++....+..|..   .+.+++|||||++|++++.         ++.|++||
T Consensus        19 ~~~~~s~dg~--~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d   96 (719)
T 1z68_A           19 FFPNWISGQE--YLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD   96 (719)
T ss_dssp             CCCEESSSSE--EEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             CccEECCCCe--EEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence            3779999995  44455799999999999988777766544   4899999999999998876         68999999


Q ss_pred             CCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcc-----------------eec
Q psy15995        301 GASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQV-----------------EDQ  363 (683)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-----------------~~~  363 (683)
                      +.+++.+....   ....+..++|+|||+.|+.+. ++.|++|++.+++.......+...                 ...
T Consensus        97 ~~~g~~~~~~~---l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~  172 (719)
T 1z68_A           97 LSNGEFVRGNE---LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKY  172 (719)
T ss_dssp             TTTTEECCSSC---CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred             CCCCcccccee---cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcc
Confidence            99988732222   124688899999999999886 689999999888764322111111                 114


Q ss_pred             eEEEEecCCEEEEEecCC----------------------------------cEEEEecCCCCcc----e---eeeeecc
Q psy15995        364 QVSCLWQGDYLLTVSLSG----------------------------------FISYLDVNNPSTP----I---RVIKGHN  402 (683)
Q Consensus       364 ~~~~~~~~~~l~~~~~~g----------------------------------~i~~~~~~~~~~~----~---~~~~~~~  402 (683)
                      .+.++|++++|++++.+.                                  .+.+||+..+...    +   ..+.+|.
T Consensus       173 ~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~  252 (719)
T 1z68_A          173 ALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD  252 (719)
T ss_dssp             CEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSC
T ss_pred             cEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCc
Confidence            788999999999987652                                  6788998764321    1   1133577


Q ss_pred             ccEEEEEEeCCCCEEEEEeCC----CcEEEEc----CCCCCcceecc---CCCCcceeEEEEeCCeEEEEEcCCeEEEEe
Q psy15995        403 KPITALALSPDRGTVFTGSHD----GFITRWN----AKTGENDRVQG---AGHGNQINGMKATGELLYTCGIDDTIKQVD  471 (683)
Q Consensus       403 ~~v~~~~~~~~~~~l~~~~~d----g~i~~w~----~~~~~~~~~~~---~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~  471 (683)
                      ..+..++|+||++.+++....    ..|.+||    +.+++......   ..+...+.                      
T Consensus       253 ~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~----------------------  310 (719)
T 1z68_A          253 YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAG----------------------  310 (719)
T ss_dssp             EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSS----------------------
T ss_pred             ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEc----------------------
Confidence            889999999998777764432    2477888    66554433221   11111000                      


Q ss_pred             CCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEE--EcCCC--cEEE
Q psy15995        472 LSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAV--GGADS--KVHI  547 (683)
Q Consensus       472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~dg--~i~i  547 (683)
                                                                       ......++|+|||+.++.  ...+|  .|.+
T Consensus       311 -------------------------------------------------~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~  341 (719)
T 1z68_A          311 -------------------------------------------------GFFVSTPVFSYDAISYYKIFSDKDGYKHIHY  341 (719)
T ss_dssp             -------------------------------------------------SSSCCCCEECTTSSCEEEEEECTTSCEEEEE
T ss_pred             -------------------------------------------------cccCCccEECCCCCeEEEEEEccCCceEEEE
Confidence                                                             000125689999986654  44555  4666


Q ss_pred             EEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCC-----CeEEEEECCC--Ccc--cc-ccceeeecccEEEEEec
Q psy15995        548 YELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAH-----RKVVLYRVPD--FEL--AH-NKEWGFHSAKVNCVAWS  617 (683)
Q Consensus       548 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~~~~~--~~~--~~-~~~~~~h~~~v~~~~~s  617 (683)
                      |++.+++..  ....+...+..+.++ +++.|+..+.+     +..++|.+..  +..  .. ...+.+|...+..+.|+
T Consensus       342 ~~~~~~~~~--~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s  418 (719)
T 1z68_A          342 IKDTVENAI--QITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFS  418 (719)
T ss_dssp             ESSCSTTCE--ECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEEC
T ss_pred             EECCCCceE--ecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEEC
Confidence            677665522  222345567777777 88888776655     7788888753  321  11 11111144567889999


Q ss_pred             CCCCeEEEe-ecC--CcEEEEeCCCCceeeEe
Q psy15995        618 PDSALVASG-SLD--TTIIIWSLASPAKHIII  646 (683)
Q Consensus       618 ~d~~~l~~~-~~d--~~v~iw~~~~~~~~~~~  646 (683)
                      ||+++++.. +.+  ..+.+||+.+++....+
T Consensus       419 ~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~~  450 (719)
T 1z68_A          419 DYAKYYALVCYGPGIPISTLHDGRTDQEIKIL  450 (719)
T ss_dssp             GGGSSEEEEECCBSSCEEEEECSSSCCEEEEE
T ss_pred             CCCCEEEEEcCCCCCCeEEEEECCCCCEEEEe
Confidence            999888753 333  46889999887754433

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.88  E-value=7e-21  Score=187.21  Aligned_cols=264  Identities=11%  Similarity=0.024  Sum_probs=177.0

Q ss_pred             EEEeCCCCcccccccCcccceEE-----EEECCCCcEEEEecC-CCC--EEEEeCCCcccccccccccCCCCcccceeee
Q psy15995         68 IIRNIENPAISDIYTEHSCAVNV-----AKYSPSGFYIASGDI-SGK--VRIWDTVNKEHILKNEFHPIGGPIKDIGTLL  139 (683)
Q Consensus        68 ~v~~~~~~~~~~~~~~h~~~v~~-----~~~s~d~~~las~~~-dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (683)
                      ..+|..++.....+..|......     .+|||||++||.++. ++.  |.+||+.+++.......+.            
T Consensus        13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~------------   80 (388)
T 3pe7_A           13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRG------------   80 (388)
T ss_dssp             EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSC------------
T ss_pred             EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCC------------
Confidence            34577778777888888876666     899999999998876 664  8889998887654443332            


Q ss_pred             eecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEE--EEcCCCCeEEEEec------------
Q psy15995        140 SLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDI--AWSPDNQRMVVVGE------------  205 (683)
Q Consensus       140 ~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~--~~s~~~~~l~~~~~------------  205 (683)
                        ..+..+.|+|||++|+.++.++.|++||+.+++........  ...+...  .++||++.++....            
T Consensus        81 --~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~--~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~  156 (388)
T 3pe7_A           81 --DNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVP--AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWK  156 (388)
T ss_dssp             --BCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC--TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHH
T ss_pred             --CCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeech--hhcccccceeECCCCCeeccccccCcccccccccc
Confidence              23346789999999999999999999999998765443333  2334333  45899998876431            


Q ss_pred             --------CCceEEEEEEccCCCceeeeecCCcCeEEEEeec-CCCeEEEEeeC------CCeEEEEcCCCCceeeeccc
Q psy15995        206 --------GRERFGHVFMSETGTSVGEISGQSKPINSCDFKP-SRPFRIITGSE------DNTIAVFEGPPFKFKMTKQE  270 (683)
Q Consensus       206 --------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~  270 (683)
                              +....+.+++.++++ ...+..+...+..+.|+| +++. ++....      ...|.++|...++... +..
T Consensus       157 ~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~  233 (388)
T 3pe7_A          157 KFHEFYFTKPCCRLMRVDLKTGE-STVILQENQWLGHPIYRPYDDST-VAFCHEGPHDLVDARMWLINEDGTNMRK-VKT  233 (388)
T ss_dssp             HHHHHGGGCCCEEEEEEETTTCC-EEEEEEESSCEEEEEEETTEEEE-EEEEECSCTTTSSCSEEEEETTSCCCEE-SCC
T ss_pred             hhhhhhccCCcceEEEEECCCCc-eEEeecCCccccccEECCCCCCE-EEEEEecCCCCCcceEEEEeCCCCceEE-eee
Confidence                    222346667766765 445556777899999999 8885 555444      3378888876654433 333


Q ss_pred             cc--cCeEEEEECCCCCEEEEEcC-CC----cEEEEeCCCCeeEEeccCCccccC---eEEEEEccCCCEEEEE------
Q psy15995        271 HS--RFVQAVRYSPSGSHFASAGF-DG----KVFLYDGASADLVSELGNPAHKGG---VYAVAWKPDGTQLLTA------  334 (683)
Q Consensus       271 ~~--~~v~~~~~~~~~~~l~~~~~-dg----~i~iw~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~l~~~------  334 (683)
                      +.  ..+..++|+|||+.|+..+. ++    .|++||+.+++.......+.+...   ...++|+|||+.|+..      
T Consensus       234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~  313 (388)
T 3pe7_A          234 HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSG  313 (388)
T ss_dssp             CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC---------
T ss_pred             CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccc
Confidence            33  35788999999997765443 22    399999998875433222111100   1123689999887754      


Q ss_pred             ---ECCCcEEEEECCCCce
Q psy15995        335 ---SGDKTCKLWDIETKSV  350 (683)
Q Consensus       335 ---~~dg~i~iwd~~~~~~  350 (683)
                         ..+..|.+||+.+++.
T Consensus       314 ~~~~~~~~i~~~d~~~~~~  332 (388)
T 3pe7_A          314 YKIENDPFLYVFNMKNGTQ  332 (388)
T ss_dssp             ---CCCCEEEEEETTTTEE
T ss_pred             cccCCCCEEEEEeccCCce
Confidence               3455788888887654

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.88  E-value=3.5e-19  Score=172.86  Aligned_cols=298  Identities=11%  Similarity=0.065  Sum_probs=197.5

Q ss_pred             eccceEEEee----cCCccEEEEecc--ccceeeeccccccCCCeeEEEEcCCCCeEEEEecC--CceEEEEEEccC--C
Q psy15995        150 LSIGFYIASG----DISGKVRIWDTV--NKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEG--RERFGHVFMSET--G  219 (683)
Q Consensus       150 s~~~~~l~~~----~~d~~i~iwd~~--~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~--~~~~~~~~~~~~--~  219 (683)
                      .+...+++.|    +.++.|.+|++.  +++.......  +...+..++|+||+++|++++.+  ....+.+|.++.  +
T Consensus        10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g   87 (361)
T 3scy_A           10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG   87 (361)
T ss_dssp             GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTT
T ss_pred             CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC
Confidence            3444556665    346789999774  4543333333  55778889999999999999875  334467777765  3


Q ss_pred             C--ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc--------------ccccCeEEEEECCC
Q psy15995        220 T--SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ--------------EHSRFVQAVRYSPS  283 (683)
Q Consensus       220 ~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--------------~~~~~v~~~~~~~~  283 (683)
                      +  .+.....+......+++  ++++++++...++.+.+|++.....+....              .+...+.+++|+|+
T Consensus        88 ~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spd  165 (361)
T 3scy_A           88 TLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPD  165 (361)
T ss_dssp             EEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTT
T ss_pred             cEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCC
Confidence            3  33344446667777887  777655555578999999987543332211              12234588999999


Q ss_pred             CCEEEEEc-CCCcEEEEeCCCCe-------eE-----EeccCCccccCeEEEEEccCCCEEEEEE-CCCcEEEEECCCCc
Q psy15995        284 GSHFASAG-FDGKVFLYDGASAD-------LV-----SELGNPAHKGGVYAVAWKPDGTQLLTAS-GDKTCKLWDIETKS  349 (683)
Q Consensus       284 ~~~l~~~~-~dg~i~iw~~~~~~-------~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~  349 (683)
                      |+++++++ .++.|.+|++....       ..     ..... .....+..++|+||++++++++ .++.|.+|++.+++
T Consensus       166 g~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~  244 (361)
T 3scy_A          166 GKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV-APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM  244 (361)
T ss_dssp             SSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC-CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE
T ss_pred             CCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec-CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc
Confidence            99766554 47899999877543       11     11111 2455678999999999888877 58999999998765


Q ss_pred             eee--EEEecC--cceeceEEEEecCCEEEEEecC--CcEEEEecCCC-Cc--ceeeeeeccccEEEEEEeCCCCEEEEE
Q psy15995        350 VVS--EFIMGN--QVEDQQVSCLWQGDYLLTVSLS--GFISYLDVNNP-ST--PIRVIKGHNKPITALALSPDRGTVFTG  420 (683)
Q Consensus       350 ~~~--~~~~~~--~~~~~~~~~~~~~~~l~~~~~~--g~i~~~~~~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~  420 (683)
                      ...  .+....  ......+.++|++++++++..+  +.+.+|++... ..  .+..+.. ...+.+++|+|+|++|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~  323 (361)
T 3scy_A          245 LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVA  323 (361)
T ss_dssp             EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEE
T ss_pred             eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEE
Confidence            422  222111  1234578889999998777765  89999999632 22  2333333 4567899999999998888


Q ss_pred             e-CCCcEEEE--cCCCCCcceeccCCCCcceeEEEE
Q psy15995        421 S-HDGFITRW--NAKTGENDRVQGAGHGNQINGMKA  453 (683)
Q Consensus       421 ~-~dg~i~~w--~~~~~~~~~~~~~~~~~~v~~~~~  453 (683)
                      + .++.|.+|  |..+++........+...+.++.|
T Consensus       324 ~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~  359 (361)
T 3scy_A          324 CRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKF  359 (361)
T ss_dssp             ETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEE
T ss_pred             ECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEE
Confidence            7 57889995  555666655443334455666665

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.88  E-value=2.1e-21  Score=190.96  Aligned_cols=276  Identities=9%  Similarity=0.039  Sum_probs=188.9

Q ss_pred             EeeCCCCCeEEEecC--C--eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccc
Q psy15995         50 LGGDPKGKNFLYTNG--N--SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        50 ~~~s~~~~~l~~~~~--~--~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      .+|||||++|++..+  +  .|.+||+++++......+|...+..++|||||++|+.++.++.|.+||+.+++.......
T Consensus        41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~  120 (388)
T 3pe7_A           41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV  120 (388)
T ss_dssp             CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred             ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence            679999999998853  4  599999999998877777777777789999999999999999999999999865544333


Q ss_pred             ccCCCCcccceeeeeeccee--eeEeeccceEEEe----------------------ecCCccEEEEeccccceeeeccc
Q psy15995        126 HPIGGPIKDIGTLLSLTSIR--NILVLSIGFYIAS----------------------GDISGKVRIWDTVNKEHILKNEF  181 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~--~~~~s~~~~~l~~----------------------~~~d~~i~iwd~~~~~~~~~~~~  181 (683)
                      +.              ..+.  ...+++++++++.                      ...+..|.+||+.+++....   
T Consensus       121 ~~--------------~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l---  183 (388)
T 3pe7_A          121 PA--------------EWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI---  183 (388)
T ss_dssp             CT--------------TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE---
T ss_pred             hh--------------hcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEe---
Confidence            22              1121  2245888888873                      23457899999998864322   


Q ss_pred             cccCCCeeEEEEcC-CCCeEEEEecCC----ceEEEEEEccCCCceeeeecCC--cCeEEEEeecCCCeEEEEeeCCC--
Q psy15995        182 HPIGGPIKDIAWSP-DNQRMVVVGEGR----ERFGHVFMSETGTSVGEISGQS--KPINSCDFKPSRPFRIITGSEDN--  252 (683)
Q Consensus       182 ~~~~~~i~~~~~s~-~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~~d~--  252 (683)
                      ..+...+..++|+| ||+.++.+....    ...+.+++.+.+. ...+..+.  ..+....|+|+++.+++.+..++  
T Consensus       184 ~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~  262 (388)
T 3pe7_A          184 LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSP  262 (388)
T ss_dssp             EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCC
T ss_pred             ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccceECCCCCEEEEEecCCCCC
Confidence            23446789999999 999998887642    2234444444433 34444444  35788999999996434443322  


Q ss_pred             --eEEEEcCCCCceee--eccccccC---eEEEEECCCCCEEEEE---------cCCCcEEEEeCCCCeeEEeccCCccc
Q psy15995        253 --TIAVFEGPPFKFKM--TKQEHSRF---VQAVRYSPSGSHFASA---------GFDGKVFLYDGASADLVSELGNPAHK  316 (683)
Q Consensus       253 --~i~iw~~~~~~~~~--~~~~~~~~---v~~~~~~~~~~~l~~~---------~~dg~i~iw~~~~~~~~~~~~~~~~~  316 (683)
                        .|.+||+.+++...  .+.++...   ....+|+|||+.|+..         ..+..|++||+.+++......   +.
T Consensus       263 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~---~~  339 (388)
T 3pe7_A          263 DRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVAR---HD  339 (388)
T ss_dssp             CEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEE---CC
T ss_pred             cceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEecc---cc
Confidence              39999998887433  22221110   1123799999977754         446689999999887644332   33


Q ss_pred             c-----------CeEEEEEccCCCEEEEEEC-CCcEEEEECC
Q psy15995        317 G-----------GVYAVAWKPDGTQLLTASG-DKTCKLWDIE  346 (683)
Q Consensus       317 ~-----------~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~  346 (683)
                      .           .+.+++|+|||+.|+..+. +|...+|.+.
T Consensus       340 ~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~  381 (388)
T 3pe7_A          340 TSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT  381 (388)
T ss_dssp             CCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             CcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence            3           4778899999998887664 6666666543

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.88  E-value=3.1e-20  Score=197.72  Aligned_cols=238  Identities=14%  Similarity=0.138  Sum_probs=161.3

Q ss_pred             ceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC----
Q psy15995         87 AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS----  162 (683)
Q Consensus        87 ~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----  162 (683)
                      ...+++|+|||++++++  |++|++||+.+++....+..+....         .......+.|||||++|+.++.+    
T Consensus        18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~Spdg~~l~~~~~~~~~~   86 (740)
T 4a5s_A           18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDE---------FGHSINDYSISPDGQFILLEYNYVKQW   86 (740)
T ss_dssp             CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTT---------CCSCCCEEEECTTSSEEEEEEEEEECS
T ss_pred             cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhh---------hcccccceEECCCCCEEEEEECCeeeE
Confidence            45688999999999997  8999999999998665554443110         00122347899999999998876    


Q ss_pred             -----ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceee-eecCCcCe----
Q psy15995        163 -----GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGE-ISGQSKPI----  232 (683)
Q Consensus       163 -----~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v----  232 (683)
                           +.+.+||+.+++..   .+..+.+.+...+|||||+.|+.+...   .+++++..+++.... ..++...+    
T Consensus        87 r~~~~~~~~~~d~~~~~~~---~l~~~~~~~~~~~~SPdG~~la~~~~~---~i~~~~~~~~~~~~lt~~g~~~~~~~g~  160 (740)
T 4a5s_A           87 RHSYTASYDIYDLNKRQLI---TEERIPNNTQWVTWSPVGHKLAYVWNN---DIYVKIEPNLPSYRITWTGKEDIIYNGI  160 (740)
T ss_dssp             SSCEEEEEEEEETTTTEEC---CSSCCCTTEEEEEECSSTTCEEEEETT---EEEEESSTTSCCEECCSCCBTTTEEESB
T ss_pred             EEccceEEEEEECCCCcEE---EcccCCCcceeeEECCCCCEEEEEECC---eEEEEECCCCceEEEcCCCCccceecCc
Confidence                 56779999998743   244456789999999999999998654   256666666654332 22332222    


Q ss_pred             -------------EEEEeecCCCeEEEEeeC-CCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEE
Q psy15995        233 -------------NSCDFKPSRPFRIITGSE-DNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL  298 (683)
Q Consensus       233 -------------~~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  298 (683)
                                   ..+.|+|||+. |+..+. ++.+.+|++......   ..+...+..+.+.+.|..    .....|++
T Consensus       161 ~~~v~~ee~~~~~~~~~wSpDg~~-la~~~~d~~~v~~~~~~~~~~~---~~~~~~~~~~~yp~~G~~----~~~~~l~v  232 (740)
T 4a5s_A          161 TDWVYEEEVFSAYSALWWSPNGTF-LAYAQFNDTEVPLIEYSFYSDE---SLQYPKTVRVPYPKAGAV----NPTVKFFV  232 (740)
T ss_dssp             CCHHHHHHTSSSSBCEEECTTSSE-EEEEEEECTTCCEEEEEECCST---TCSSCEEEEEECCBTTSC----CCEEEEEE
T ss_pred             ccccccchhcCCCcceEECCCCCE-EEEEEEcccCCceEEEEeecCC---CCCCCcceeecCCCCcCc----CCeeEEEE
Confidence                         35899999997 655554 455888875321110   024456777888877753    22336899


Q ss_pred             EeCCC---Ce--eEEeccCC----ccccCeEEEEEccCCCEEEEEECC----CcEEEEECCCCc
Q psy15995        299 YDGAS---AD--LVSELGNP----AHKGGVYAVAWKPDGTQLLTASGD----KTCKLWDIETKS  349 (683)
Q Consensus       299 w~~~~---~~--~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~  349 (683)
                      ||+.+   ++  ....+..+    .+...+..++|+||++.++.....    ..|.+||+.+++
T Consensus       233 ~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~  296 (740)
T 4a5s_A          233 VNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS  296 (740)
T ss_dssp             EETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred             EECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence            99998   73  22233221    266779999999999976665432    368899988776

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.86  E-value=2.9e-19  Score=176.03  Aligned_cols=272  Identities=14%  Similarity=0.110  Sum_probs=184.5

Q ss_pred             EecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCc---cccee
Q psy15995         61 YTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPI---KDIGT  137 (683)
Q Consensus        61 ~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~~  137 (683)
                      +-..+.+++|+....       .+...++.+++++++.++++++.++ ++||+..........  .......   .....
T Consensus        19 F~~~~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~   88 (434)
T 2oit_A           19 FRALKKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKP--GDDPNKIVDKVQGLL   88 (434)
T ss_dssp             EEECCEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCT--TCCTTCEEECCCCEE
T ss_pred             eeeeeeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhccc--ccCcccccccCcccc
Confidence            334467888765321       1344689999999999999999887 999886432111000  0000000   00111


Q ss_pred             eeeecceeeeEeeccceEEE----eecCCccEEEEecccc--------ceee-eccccccCCCeeEEEEcCC-CCeEEEE
Q psy15995        138 LLSLTSIRNILVLSIGFYIA----SGDISGKVRIWDTVNK--------EHIL-KNEFHPIGGPIKDIAWSPD-NQRMVVV  203 (683)
Q Consensus       138 ~~~~~~i~~~~~s~~~~~l~----~~~~d~~i~iwd~~~~--------~~~~-~~~~~~~~~~i~~~~~s~~-~~~l~~~  203 (683)
                      ......+.+++|+|+|++||    +++.|+.|++||+.++        +.+. ...+..|...|.+++|+|+ +.+++++
T Consensus        89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~  168 (434)
T 2oit_A           89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC  168 (434)
T ss_dssp             ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred             ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence            22335699999999999999    8899999999999875        1111 2334557789999999998 7788888


Q ss_pred             ecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecccc-------ccCeE
Q psy15995        204 GEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH-------SRFVQ  276 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-------~~~v~  276 (683)
                      +.++.  +.+|+.+++.......+|...|.+++|+|++++ |++|+.||.|++||.+ ++....+..|       ...|.
T Consensus       169 s~Dg~--v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~-lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~  244 (434)
T 2oit_A          169 LADGS--IAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQ-LAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVL  244 (434)
T ss_dssp             ETTSC--EEEEEESSSEEEEEEECGGGCEEEEEECTTSSC-EEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEE
T ss_pred             ECCCe--EEEEEcCCCcceeeccCCCCceeEEEEcCCCCE-EEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEE
Confidence            87654  789999988777777889999999999999986 9999999999999988 5544444332       34899


Q ss_pred             EEEECCCCCEEEEE-cCCC------cEEEEeCCCCe-----eEEeccCC-----ccccCeEEEEEccCCCEEEEEEC-CC
Q psy15995        277 AVRYSPSGSHFASA-GFDG------KVFLYDGASAD-----LVSELGNP-----AHKGGVYAVAWKPDGTQLLTASG-DK  338 (683)
Q Consensus       277 ~~~~~~~~~~l~~~-~~dg------~i~iw~~~~~~-----~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~-dg  338 (683)
                      +++|++++.++++. +.+|      .+++|++...+     ....+..+     ....+-..+.+.++.+++++++. ..
T Consensus       245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~  324 (434)
T 2oit_A          245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAAST  324 (434)
T ss_dssp             EEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCS
T ss_pred             EEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCC
Confidence            99999988776543 3343      38999987642     11222111     12233334455577777766655 44


Q ss_pred             cEEEEECC
Q psy15995        339 TCKLWDIE  346 (683)
Q Consensus       339 ~i~iwd~~  346 (683)
                      .|.++...
T Consensus       325 dv~vl~~~  332 (434)
T 2oit_A          325 EVSILARQ  332 (434)
T ss_dssp             BCEEEEEC
T ss_pred             ceeEEEec
Confidence            57777644

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.86  E-value=1.2e-18  Score=171.66  Aligned_cols=205  Identities=20%  Similarity=0.173  Sum_probs=156.6

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccce----------eee---ccccccCCCeeEEEEcCCCCeEEEE--ecC
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEH----------ILK---NEFHPIGGPIKDIAWSPDNQRMVVV--GEG  206 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~----------~~~---~~~~~~~~~i~~~~~s~~~~~l~~~--~~~  206 (683)
                      ..++.+++++++.++++++.++ +++|+......          +..   .....+.+.|.+++|+|++++|+++  +..
T Consensus        37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs  115 (434)
T 2oit_A           37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE  115 (434)
T ss_dssp             SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred             CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence            4578899999999999999888 89987643211          000   0011234679999999999999964  345


Q ss_pred             CceEEEEEEccCC--------Cc---eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCe
Q psy15995        207 RERFGHVFMSETG--------TS---VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFV  275 (683)
Q Consensus       207 ~~~~~~~~~~~~~--------~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v  275 (683)
                      .+..+.+|+.+++        +.   ...+.+|...|.+++|+|++..++++++.||+|++||++++.......+|...|
T Consensus       116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v  195 (434)
T 2oit_A          116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAV  195 (434)
T ss_dssp             TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCE
T ss_pred             CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCce
Confidence            5666889988754        22   455677999999999999844469999999999999999987777777889999


Q ss_pred             EEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC-----ccccCeEEEEEccCCCEEEEEE-CCCc------EEEE
Q psy15995        276 QAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP-----AHKGGVYAVAWKPDGTQLLTAS-GDKT------CKLW  343 (683)
Q Consensus       276 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~-~dg~------i~iw  343 (683)
                      .+++|+|+|++|++|+.||.|++||.+ ++....+..+     .|...+.+++|++++.++++.+ .+|.      +++|
T Consensus       196 ~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~  274 (434)
T 2oit_A          196 TSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMA  274 (434)
T ss_dssp             EEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEE
T ss_pred             eEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEE
Confidence            999999999999999999999999988 5555444331     1234899999999887765543 3432      8899


Q ss_pred             ECCCC
Q psy15995        344 DIETK  348 (683)
Q Consensus       344 d~~~~  348 (683)
                      ++...
T Consensus       275 ~l~~~  279 (434)
T 2oit_A          275 LLPKK  279 (434)
T ss_dssp             ECCCT
T ss_pred             EeccC
Confidence            99865

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.85  E-value=6.3e-19  Score=170.76  Aligned_cols=269  Identities=9%  Similarity=0.041  Sum_probs=179.8

Q ss_pred             CeEEEEeC--CCCccccc--cc-CcccceEEEEECCCCcEEEEecCCCCEEEEeCC-CcccccccccccCCCCcccceee
Q psy15995         65 NSVIIRNI--ENPAISDI--YT-EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTV-NKEHILKNEFHPIGGPIKDIGTL  138 (683)
Q Consensus        65 ~~i~v~~~--~~~~~~~~--~~-~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~  138 (683)
                      +.|.+|++  +++++...  .. ++...+..++|+|||++|++++.+ .|.+|++. +++......... .         
T Consensus        14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~-~---------   82 (365)
T 1jof_A           14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPI-G---------   82 (365)
T ss_dssp             CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEEC-C---------
T ss_pred             CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeec-C---------
Confidence            45776654  45554321  11 244578899999999999998887 89999997 665432221110 0         


Q ss_pred             eeecceeeeEeeccceE--EEeec-------------CCccEEEEeccc-cceeeecccc--ccCCCeeEEEEcCCCCeE
Q psy15995        139 LSLTSIRNILVLSIGFY--IASGD-------------ISGKVRIWDTVN-KEHILKNEFH--PIGGPIKDIAWSPDNQRM  200 (683)
Q Consensus       139 ~~~~~i~~~~~s~~~~~--l~~~~-------------~d~~i~iwd~~~-~~~~~~~~~~--~~~~~i~~~~~s~~~~~l  200 (683)
                         ..+..++|+|||++  +++++             .++.+.+|++.. ++........  .+...+.+++|+|||+++
T Consensus        83 ---g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l  159 (365)
T 1jof_A           83 ---GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYL  159 (365)
T ss_dssp             ---SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred             ---CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEE
Confidence               12456889999994  55554             689999999973 5433222211  234678999999999998


Q ss_pred             EEEecCCceEEEEEEcc-CCCce--eeee--cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC--CCceee------e
Q psy15995        201 VVVGEGRERFGHVFMSE-TGTSV--GEIS--GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP--PFKFKM------T  267 (683)
Q Consensus       201 ~~~~~~~~~~~~~~~~~-~~~~~--~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~------~  267 (683)
                      +++..+.+ .+.+|+.+ +++..  ..+.  .|...+..++|+|++++++++...++.|.+|+..  +++...      .
T Consensus       160 ~~~~~~~~-~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~  238 (365)
T 1jof_A          160 YSADLTAN-KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPL  238 (365)
T ss_dssp             EEEETTTT-EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEES
T ss_pred             EEEcCCCC-EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEc
Confidence            87764433 47888887 66543  2333  2466799999999999744444457899999754  454321      1


Q ss_pred             cc----cccc------CeEEEE-ECCCCCEEEEEcCCC------cEEEEeCC-CCeeEEecc-CCccccCeEEEEEcc--
Q psy15995        268 KQ----EHSR------FVQAVR-YSPSGSHFASAGFDG------KVFLYDGA-SADLVSELG-NPAHKGGVYAVAWKP--  326 (683)
Q Consensus       268 ~~----~~~~------~v~~~~-~~~~~~~l~~~~~dg------~i~iw~~~-~~~~~~~~~-~~~~~~~i~~~~~~~--  326 (683)
                      +.    +|..      .+..++ |+|||++|++++.+.      .|.+|++. +++...... .+.+...+..++|+|  
T Consensus       239 ~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~  318 (365)
T 1jof_A          239 IPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCP  318 (365)
T ss_dssp             SCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECT
T ss_pred             CCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCC
Confidence            21    1222      588999 999999888776432      89999986 566543211 111344566889999  


Q ss_pred             -CCCEEEEEECC-CcEEEEECCCC
Q psy15995        327 -DGTQLLTASGD-KTCKLWDIETK  348 (683)
Q Consensus       327 -~~~~l~~~~~d-g~i~iwd~~~~  348 (683)
                       |+++|++++.+ +.|.+|++...
T Consensus       319 ~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          319 WSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             TCTTEEEEECSSSCEEEEEEEETT
T ss_pred             cCCCEEEEEEcCCCeEEEEEEchh
Confidence             89999998864 89999998765

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.85  E-value=4.9e-19  Score=170.14  Aligned_cols=294  Identities=12%  Similarity=0.076  Sum_probs=193.7

Q ss_pred             CCCCeEEEec-------CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEec----------CCCCEEEEeCCC
Q psy15995         54 PKGKNFLYTN-------GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD----------ISGKVRIWDTVN  116 (683)
Q Consensus        54 ~~~~~l~~~~-------~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~----------~dg~i~iwd~~~  116 (683)
                      ++++++....       ++.|.+||.++++.+..+..+..+  .++|+|||++|+++.          .++.|.+||..+
T Consensus        13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t   90 (361)
T 2oiz_A           13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK   90 (361)
T ss_dssp             CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred             CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence            3556655542       569999999999988888877766  999999999998875          356799999998


Q ss_pred             cccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC--CccEEEEeccccceeee-ccccccCCCeeEEEE
Q psy15995        117 KEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI--SGKVRIWDTVNKEHILK-NEFHPIGGPIKDIAW  193 (683)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--d~~i~iwd~~~~~~~~~-~~~~~~~~~i~~~~~  193 (683)
                      .+.+.++...+..        .........++++|||++|+++..  +++|.+||+.+++.+.. ....    ....+.+
T Consensus        91 ~~~~~~i~~~~~~--------~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~----~~~~v~~  158 (361)
T 2oiz_A           91 LTFEKEISLPPKR--------VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA----GCWSVIP  158 (361)
T ss_dssp             CCEEEEEEECTTB--------CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT----TEEEEEE
T ss_pred             CcEEEEEEcCccc--------cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC----CcceeEE
Confidence            8877766543210        001134678999999999998764  68999999999876544 3322    1122445


Q ss_pred             cCCC-CeEEEEecCCceEEEEEEccC-CCcee------eeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee
Q psy15995        194 SPDN-QRMVVVGEGRERFGHVFMSET-GTSVG------EISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK  265 (683)
Q Consensus       194 s~~~-~~l~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  265 (683)
                      .|++ ..+++.+.++.  +.++..+. ++...      .+..+..++ .+.+++++.. ++..+.++.+.++|....+..
T Consensus       159 ~p~~~~~~~~~~~dg~--~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~-~~~~~~~~~v~v~d~~~~~~~  234 (361)
T 2oiz_A          159 QPNRPRSFMTICGDGG--LLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDK-AHFVSYYGNVYSADFSGDEVK  234 (361)
T ss_dssp             CTTSSSEEEEEETTSS--EEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSE-EEEEBTTSEEEEEECSSSSCE
T ss_pred             cCCCCeeEEEECCCCc--EEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCE-EEEEeCCCeEEEEEecCCCce
Confidence            5655 33333333332  23333332 33331      122222222 3344677764 566667899999998654321


Q ss_pred             --eecc--c----c----ccCeEEEEECCCCCEEEEEcC-----------CCcEEEEeCCCCeeEEeccCCccccCeEEE
Q psy15995        266 --MTKQ--E----H----SRFVQAVRYSPSGSHFASAGF-----------DGKVFLYDGASADLVSELGNPAHKGGVYAV  322 (683)
Q Consensus       266 --~~~~--~----~----~~~v~~~~~~~~~~~l~~~~~-----------dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~  322 (683)
                        ..+.  .    +    ......++++|+++.++++..           .+.|.+||+.+++.+..+..  +.  +.++
T Consensus       235 ~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~--~~--p~~i  310 (361)
T 2oiz_A          235 VDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG--RD--ALSM  310 (361)
T ss_dssp             EEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC--TT--CCEE
T ss_pred             ecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec--CC--eeEE
Confidence              1110  0    0    111223789999888777643           34799999999999999875  44  8999


Q ss_pred             EEccCCCEEEEEECCCcEEEEECCCC--ceeeEEEecCcceeceEEEEecC
Q psy15995        323 AWKPDGTQLLTASGDKTCKLWDIETK--SVVSEFIMGNQVEDQQVSCLWQG  371 (683)
Q Consensus       323 ~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~  371 (683)
                      +|+||+++|++++. +.|.+||..++  +.+.++. ........+.+.|+|
T Consensus       311 a~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~-~~G~~P~~~~~~p~G  359 (361)
T 2oiz_A          311 TIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIE-GAAEASLQVQFHPVG  359 (361)
T ss_dssp             EEETTTTEEEEECS-SCEEEEECSSSSCEEEEEET-TSCSSEEEEEECCCS
T ss_pred             EECCCCCEEEEeCC-CeEEEEECCCCcceeeEEec-cCCCCcEEEEecCCC
Confidence            99999999998887 99999999999  7776652 223344455666554

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.85  E-value=5.1e-20  Score=181.72  Aligned_cols=291  Identities=10%  Similarity=-0.039  Sum_probs=186.8

Q ss_pred             eEEEeeCCCCCeEEEecC----CeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccc
Q psy15995         47 PIVLGGDPKGKNFLYTNG----NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILK  122 (683)
Q Consensus        47 ~~~~~~s~~~~~l~~~~~----~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~  122 (683)
                      +..++|||||++|++..+    ..|.+||+++++......++......+.|||||++|+.++.++.|.+||+.+++....
T Consensus        38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~  117 (396)
T 3c5m_A           38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI  117 (396)
T ss_dssp             TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred             eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence            456789999999998743    3799999999887654444443344488999999999999888999999988765433


Q ss_pred             cccccCCCCcccceeeee-------ecceeeeEeeccceEEEee-----cCCccEEEEeccccceeeeccccccCCCeeE
Q psy15995        123 NEFHPIGGPIKDIGTLLS-------LTSIRNILVLSIGFYIASG-----DISGKVRIWDTVNKEHILKNEFHPIGGPIKD  190 (683)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~-------~~~i~~~~~s~~~~~l~~~-----~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~  190 (683)
                      ...+..  ....-..+..       ........++|++++++..     ..+..|.+||+.+++.....   .+...+..
T Consensus       118 ~~~~~~--~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~---~~~~~~~~  192 (396)
T 3c5m_A          118 YTVDEE--WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH---QDTAWLGH  192 (396)
T ss_dssp             EECCTT--EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE---EESSCEEE
T ss_pred             Eecccc--cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec---cCCccccc
Confidence            322210  0000000000       0000114578888877665     45678999999887644322   34567899


Q ss_pred             EEEcC-CCCeEEEEecCCc----eEEEEEEccCCCceeeeecC-CcCeEEEEeecCCCeEEEEeeCC-----CeEEEEcC
Q psy15995        191 IAWSP-DNQRMVVVGEGRE----RFGHVFMSETGTSVGEISGQ-SKPINSCDFKPSRPFRIITGSED-----NTIAVFEG  259 (683)
Q Consensus       191 ~~~s~-~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d-----~~i~iw~~  259 (683)
                      +.|+| +++.++.+..+..    ..+.+++.+.++........ ...+..+.|+|+++. |+..+.+     +.|.+||+
T Consensus       193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~l~~~d~  271 (396)
T 3c5m_A          193 PIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSA-MAYVSYFKGQTDRVIYKANP  271 (396)
T ss_dssp             EEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSC-EEEEEEETTTCCEEEEEECT
T ss_pred             ceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCE-EEEEecCCCCccceEEEEEC
Confidence            99999 8888887765432    23555665544433222221 335888999999996 5444332     45999999


Q ss_pred             CCCceeeeccccccCeEEEEECC-CCCEEEEEc----------------CCCcEEEEeCCCCeeEEeccCCcccc-----
Q psy15995        260 PPFKFKMTKQEHSRFVQAVRYSP-SGSHFASAG----------------FDGKVFLYDGASADLVSELGNPAHKG-----  317 (683)
Q Consensus       260 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~----------------~dg~i~iw~~~~~~~~~~~~~~~~~~-----  317 (683)
                      .+++....... . ... +.|+| +|+++++++                .++.|++||+.+++......   +..     
T Consensus       272 ~~g~~~~l~~~-~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~---~~~~~~~~  345 (396)
T 3c5m_A          272 ETLENEEVMVM-P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCK---HSTSWDVL  345 (396)
T ss_dssp             TTCCEEEEEEC-C-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEE---CCCCCCCB
T ss_pred             CCCCeEEeeeC-C-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccC---CCCccccc
Confidence            88765443221 1 133 88999 999887754                24789999998876543222   222     


Q ss_pred             ------CeEEEEEccCCCEEEEEEC-CCcEEEE--ECCCCc
Q psy15995        318 ------GVYAVAWKPDGTQLLTASG-DKTCKLW--DIETKS  349 (683)
Q Consensus       318 ------~i~~~~~~~~~~~l~~~~~-dg~i~iw--d~~~~~  349 (683)
                            .+..++|+|+++.|+..+. ++...+|  ++..+.
T Consensus       346 ~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~  386 (396)
T 3c5m_A          346 DGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESY  386 (396)
T ss_dssp             TTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred             cccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence                  2566789999998887765 4554454  444444

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.84  E-value=1.2e-18  Score=167.39  Aligned_cols=298  Identities=15%  Similarity=0.111  Sum_probs=210.7

Q ss_pred             CCCcEEEEec------CCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec--------
Q psy15995         95 PSGFYIASGD------ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD--------  160 (683)
Q Consensus        95 ~d~~~las~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--------  160 (683)
                      ++++++.+..      .|+.|.+||..+++.+..+...               ... .++|+|||++|++++        
T Consensus        13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g---------------~~p-~i~~spdg~~lyv~~~~~~~~~~   76 (361)
T 2oiz_A           13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTA---------------FNG-HVQVSNDGKKIYTMTTYHERITR   76 (361)
T ss_dssp             CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECC---------------EEE-EEEECTTSSEEEEEEEEETTSSS
T ss_pred             CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCC---------------CCC-ceEECCCCCEEEEEEeccccccc
Confidence            3667776543      4679999999988776554432               223 899999999998876        


Q ss_pred             --CCccEEEEeccccceeeeccccc----cCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceee-eecCCcCeE
Q psy15995        161 --ISGKVRIWDTVNKEHILKNEFHP----IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGE-ISGQSKPIN  233 (683)
Q Consensus       161 --~d~~i~iwd~~~~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~  233 (683)
                        .++.|.+||..+++.+.......    .......++|+|||++|+++.......+.+++.++++.+.. +....  ..
T Consensus        77 g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~  154 (361)
T 2oiz_A           77 GKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CW  154 (361)
T ss_dssp             SCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EE
T ss_pred             CCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cc
Confidence              36789999999887665544321    22457789999999999998865444578999998887766 44322  23


Q ss_pred             EEEeecCCCeEEEEeeCCCeEEEEcCCC-Cceee------eccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee
Q psy15995        234 SCDFKPSRPFRIITGSEDNTIAVFEGPP-FKFKM------TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL  306 (683)
Q Consensus       234 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~  306 (683)
                      .+.+.|+++..+++.+.||.+.+|+... ++...      .+.....++ .+.+++++..++..+.++.+.++|+.....
T Consensus       155 ~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~  233 (361)
T 2oiz_A          155 SVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEV  233 (361)
T ss_dssp             EEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSC
T ss_pred             eeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCc
Confidence            3567787755688899999999998765 44431      122222222 334467777777788899999999875532


Q ss_pred             --EEeccCCc--------cccCeEEEEEccCCCEEEEEEC-----------CCcEEEEECCCCceeeEEEecCcceeceE
Q psy15995        307 --VSELGNPA--------HKGGVYAVAWKPDGTQLLTASG-----------DKTCKLWDIETKSVVSEFIMGNQVEDQQV  365 (683)
Q Consensus       307 --~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  365 (683)
                        ...+....        .......++|+|+++.++++..           .+.|.+||+.+++.+.++..+.   ...+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~---p~~i  310 (361)
T 2oiz_A          234 KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD---ALSM  310 (361)
T ss_dssp             EEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT---CCEE
T ss_pred             eecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC---eeEE
Confidence              12211100        0111223789999888887653           3479999999999998887665   8889


Q ss_pred             EEEecCCEEEEEecCCcEEEEecCCCC-cceeeeeeccccEEEEEEeCCCC
Q psy15995        366 SCLWQGDYLLTVSLSGFISYLDVNNPS-TPIRVIKGHNKPITALALSPDRG  415 (683)
Q Consensus       366 ~~~~~~~~l~~~~~~g~i~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~  415 (683)
                      .+++++++++++.. +.|.+||..+.. +.+..+..+......++++|+|+
T Consensus       311 a~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          311 TIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             EEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             EECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence            99999999998887 999999998841 44555555667788999999985

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.84  E-value=2.2e-19  Score=173.94  Aligned_cols=247  Identities=13%  Similarity=0.037  Sum_probs=168.6

Q ss_pred             CeEEEeeCCCCCeEEEecCCeEEEEeCC-CCcccccccCc-ccceEEEEECCCCcE--EEEec-------------CCCC
Q psy15995         46 QPIVLGGDPKGKNFLYTNGNSVIIRNIE-NPAISDIYTEH-SCAVNVAKYSPSGFY--IASGD-------------ISGK  108 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~~~i~v~~~~-~~~~~~~~~~h-~~~v~~~~~s~d~~~--las~~-------------~dg~  108 (683)
                      .+..+++||||++|++++.+.|.+|++. ++++....... .+.+.+++|+|||++  +++++             .+|.
T Consensus        41 ~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~  120 (365)
T 1jof_A           41 PISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGY  120 (365)
T ss_dssp             CCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCE
T ss_pred             CCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCce
Confidence            5778999999999887765599999997 77664432211 123567899999994  55664             6889


Q ss_pred             EEEEeCCC-cccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec-CCccEEEEecc-ccceeeecccc--c
Q psy15995        109 VRIWDTVN-KEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD-ISGKVRIWDTV-NKEHILKNEFH--P  183 (683)
Q Consensus       109 i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~iwd~~-~~~~~~~~~~~--~  183 (683)
                      +.+|++.. ++....+.....          .....+..++|+|||++|+++. .++.|++||+. +++........  .
T Consensus       121 v~v~~~~~~g~~~~~~~~~~~----------~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~  190 (365)
T 1jof_A          121 GNVFSVSETGKLEKNVQNYEY----------QENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD  190 (365)
T ss_dssp             EEEEEECTTCCEEEEEEEEEC----------CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS
T ss_pred             EEEEccCCCCcCcceEeeEEe----------CCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCC
Confidence            99999974 543322221100          0114578899999999888765 46799999998 66543222222  2


Q ss_pred             cCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc--CCCce------eeee----cCCc------CeEEEE-eecCCCeE
Q psy15995        184 IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE--TGTSV------GEIS----GQSK------PINSCD-FKPSRPFR  244 (683)
Q Consensus       184 ~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~--~~~~~------~~~~----~~~~------~v~~~~-~~~~~~~~  244 (683)
                      +...+..++|+|||++++++..... .+.+|.++  +++..      ..+.    +|..      .+..++ |+|++++ 
T Consensus       191 ~g~~p~~~~~spdg~~l~v~~~~~~-~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~-  268 (365)
T 1jof_A          191 PGDHPRWVAMHPTGNYLYALMEAGN-RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKY-  268 (365)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTTT-EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSE-
T ss_pred             CCCCCCEeEECCCCCEEEEEECCCC-eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCE-
Confidence            3467899999999999988876433 36777665  45432      1222    1222      588999 9999997 


Q ss_pred             EEEeeC-CC-----eEEEEcCC-CCceee---eccccccCeEEEEECC---CCCEEEEEcCC-CcEEEEeCCCC
Q psy15995        245 IITGSE-DN-----TIAVFEGP-PFKFKM---TKQEHSRFVQAVRYSP---SGSHFASAGFD-GKVFLYDGASA  304 (683)
Q Consensus       245 l~~~~~-d~-----~i~iw~~~-~~~~~~---~~~~~~~~v~~~~~~~---~~~~l~~~~~d-g~i~iw~~~~~  304 (683)
                      |++++. ++     .|.+|++. +++...   ....+...+..++|+|   +|++|++++.+ +.|.+|++...
T Consensus       269 l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          269 MFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             EEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             EEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence            444443 33     89999986 565443   1333455567889999   89999998864 89999998765

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.83  E-value=3.8e-17  Score=164.54  Aligned_cols=326  Identities=15%  Similarity=0.118  Sum_probs=236.1

Q ss_pred             CCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEecc--c
Q psy15995         95 PSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTV--N  172 (683)
Q Consensus        95 ~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~--~  172 (683)
                      |++.++++...+++|.++|..+++.+.++...               ..+..+.|+|||+++++++.++.|.+||+.  +
T Consensus       165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g---------------~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t  229 (567)
T 1qks_A          165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG---------------YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE  229 (567)
T ss_dssp             GGGEEEEEETTTTEEEEEETTTCCEEEEEECS---------------SCEEEEEECTTSCEEEEEETTSEEEEEETTSSS
T ss_pred             CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC---------------CCccceEECCCCCEEEEEcCCCeEEEEECCCCC
Confidence            45567778888999999999999887766543               345688999999999999999999999995  6


Q ss_pred             cceeeeccccccCCCeeEEEEc----CCCCeEEEEecCCceEEEEEEccCCCceeeeecC----------Cc-CeEEEEe
Q psy15995        173 KEHILKNEFHPIGGPIKDIAWS----PDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQ----------SK-PINSCDF  237 (683)
Q Consensus       173 ~~~~~~~~~~~~~~~i~~~~~s----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~v~~~~~  237 (683)
                      ++.+.....   ......++|+    |||++++++...... +.+++..+.+.+..+...          .. .+..+..
T Consensus       230 ~~~v~~i~~---G~~P~~ia~s~~~~pDGk~l~v~n~~~~~-v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~  305 (567)
T 1qks_A          230 PTTVAEIKI---GSEARSIETSKMEGWEDKYAIAGAYWPPQ-YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA  305 (567)
T ss_dssp             CCEEEEEEC---CSEEEEEEECCSTTCTTTEEEEEEEETTE-EEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred             CcEeEEEec---CCCCceeEEccccCCCCCEEEEEEccCCe-EEEEECCCCcEEEEEeccccccccccccCCCceEEEEE
Confidence            655443332   2456899999    699999998876544 568888888887776532          12 6788999


Q ss_pred             ecCCCeEEEEeeCCCeEEEEcCCCCceeeec-cccccCeEEEEECCCCCEEEEEc-CCCcEEEEeCCCCeeEEeccC-C-
Q psy15995        238 KPSRPFRIITGSEDNTIAVFEGPPFKFKMTK-QEHSRFVQAVRYSPSGSHFASAG-FDGKVFLYDGASADLVSELGN-P-  313 (683)
Q Consensus       238 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~-~-  313 (683)
                      +++++..++....+|.|.++|..+.+..... .........+.|+|++++++++. .++.|.++|..+++.+..+.. . 
T Consensus       306 s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~  385 (567)
T 1qks_A          306 SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQ  385 (567)
T ss_dssp             CSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS
T ss_pred             cCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCc
Confidence            9998877777788899999998765432211 12344567889999999877655 578999999999988776643 1 


Q ss_pred             -ccccCeEEEEEccCCCEEEEEE--CCCcEEEEECCC-------CceeeEEEecCcceeceEEEEecCCEEEEEec----
Q psy15995        314 -AHKGGVYAVAWKPDGTQLLTAS--GDKTCKLWDIET-------KSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSL----  379 (683)
Q Consensus       314 -~~~~~i~~~~~~~~~~~l~~~~--~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----  379 (683)
                       .|.+.-..+ ++|++..+.+.+  .++.|.++|..+       .+.++++.... .....+..+|+++++.+...    
T Consensus       386 ~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g-~g~~~i~~~p~~~~l~v~~~~~~~  463 (567)
T 1qks_A          386 TPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALG-GGSLFIKTHPNSQYLYVDATLNPE  463 (567)
T ss_dssp             SBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC-SCCCCEECCTTCSEEEEECTTCSS
T ss_pred             CCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCC-CCCEEEEeCCCCCeEEEecCCCCC
Confidence             243222222 578755554433  468999999987       55666665432 33355667889999998774    


Q ss_pred             ---CCcEEEEecCCC-----Ccceeeee--------eccccEEEEEEeCCCCEEEEEe-----CCCcEEEEcCCCCCcce
Q psy15995        380 ---SGFISYLDVNNP-----STPIRVIK--------GHNKPITALALSPDRGTVFTGS-----HDGFITRWNAKTGENDR  438 (683)
Q Consensus       380 ---~g~i~~~~~~~~-----~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~-----~dg~i~~w~~~~~~~~~  438 (683)
                         .+.|.++|+.+.     ......+.        .....+..+.|+|+|+.+..+.     .++.|.++|..+.+...
T Consensus       464 ~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~  543 (567)
T 1qks_A          464 AEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKH  543 (567)
T ss_dssp             HHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred             cccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEE
Confidence               459999999865     32223332        1235788999999999888663     37899999999988766


Q ss_pred             ecc
Q psy15995        439 VQG  441 (683)
Q Consensus       439 ~~~  441 (683)
                      ...
T Consensus       544 ~i~  546 (567)
T 1qks_A          544 VIK  546 (567)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            653

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.82  E-value=5.2e-19  Score=174.51  Aligned_cols=298  Identities=10%  Similarity=-0.019  Sum_probs=193.1

Q ss_pred             EEEeCCCCcccccccCcccc-----eEEEEECCCCcEEEEecCC---CCEEEEeCCCcccccccccccCCCCcccceeee
Q psy15995         68 IIRNIENPAISDIYTEHSCA-----VNVAKYSPSGFYIASGDIS---GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLL  139 (683)
Q Consensus        68 ~v~~~~~~~~~~~~~~h~~~-----v~~~~~s~d~~~las~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (683)
                      ...|..+++.+..+..+...     +.+++|||||++||.....   ..|.+||+.+++.........            
T Consensus        13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~------------   80 (396)
T 3c5m_A           13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKG------------   80 (396)
T ss_dssp             EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSC------------
T ss_pred             eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCC------------
Confidence            45577788776667665444     7889999999998876432   368888998876433221110            


Q ss_pred             eecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeE-------------------EEEcCCCCeE
Q psy15995        140 SLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKD-------------------IAWSPDNQRM  200 (683)
Q Consensus       140 ~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~-------------------~~~s~~~~~l  200 (683)
                        .....+.|+|||++|+..+.++.|.+||+.+++........  ......                   ..|+|+++.+
T Consensus        81 --~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~  156 (396)
T 3c5m_A           81 --DNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVD--EEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWE  156 (396)
T ss_dssp             --BCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC--TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHH
T ss_pred             --CccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecc--cccCCCCCEEEeccCCccccccccccccCCCCcce
Confidence              11233689999999999999999999999887644333222  121112                   3567888776


Q ss_pred             EEEec---CCceEEEEEEccCCCceeeeecCCcCeEEEEeec-CCCeEEEEeeCC------CeEEEEcCCCCceeeeccc
Q psy15995        201 VVVGE---GRERFGHVFMSETGTSVGEISGQSKPINSCDFKP-SRPFRIITGSED------NTIAVFEGPPFKFKMTKQE  270 (683)
Q Consensus       201 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~  270 (683)
                      ++...   .....+.+++.++++... +..+...+..+.|+| ++.. ++..+.+      ..|.+|+...++.......
T Consensus       157 ~~~~~~~~~~~~~l~~~d~~~g~~~~-~~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~  234 (396)
T 3c5m_A          157 KFAEFYHTNPTCRLIKVDIETGELEV-IHQDTAWLGHPIYRPFDDST-VGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH  234 (396)
T ss_dssp             HHHHHHHTCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEE-EEEEECSCSSSCSCCCEEEETTSCCCEESSCC
T ss_pred             eeeeeccCCCcceEEEEECCCCcEEe-eccCCcccccceECCCCCCE-EEEEecCCCCCCCceEEEEECCCCceeEeecc
Confidence            65431   333346677777766543 345677899999999 6764 4444433      4688888876654333332


Q ss_pred             c-ccCeEEEEECCCCCEEEEEcCC-----CcEEEEeCCCCeeEEeccCCccccCeEEEEEcc-CCCEEEEEE--------
Q psy15995        271 H-SRFVQAVRYSPSGSHFASAGFD-----GKVFLYDGASADLVSELGNPAHKGGVYAVAWKP-DGTQLLTAS--------  335 (683)
Q Consensus       271 ~-~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~--------  335 (683)
                      . ...+..++|+|+|+.|+.++.+     +.|++||+.+++.......+    ... +.|+| |+++++.++        
T Consensus       235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~----~~~-~~~s~~dg~~l~~~~~~~p~~~~  309 (396)
T 3c5m_A          235 AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP----PCS-HLMSNFDGSLMVGDGCDAPVDVA  309 (396)
T ss_dssp             CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC----SEE-EEEECSSSSEEEEEECCC-----
T ss_pred             CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC----CCC-CCccCCCCceEEEecCCcceeec
Confidence            1 3358889999999987776543     44999999888765443221    123 88999 999888754        


Q ss_pred             --------CCCcEEEEECCCCceeeEEEecCcc----------eeceEEEEecCCEEEEEec-CCcEEEEecC
Q psy15995        336 --------GDKTCKLWDIETKSVVSEFIMGNQV----------EDQQVSCLWQGDYLLTVSL-SGFISYLDVN  389 (683)
Q Consensus       336 --------~dg~i~iwd~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~~~-~g~i~~~~~~  389 (683)
                              .+..|.+||+.+++.. .+......          ......++++++.++..+. ++...+|.+.
T Consensus       310 ~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~  381 (396)
T 3c5m_A          310 DADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD  381 (396)
T ss_dssp             -----CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             cccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence                    2467999999887653 33222210          1344677889988877765 4555555443

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.82  E-value=5.7e-18  Score=163.49  Aligned_cols=258  Identities=15%  Similarity=0.080  Sum_probs=180.5

Q ss_pred             CeEEEeeCCCCCeEEEec----------CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCC---C--CEE
Q psy15995         46 QPIVLGGDPKGKNFLYTN----------GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDIS---G--KVR  110 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~----------~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~d---g--~i~  110 (683)
                      .+..+++  ||+++++..          .+.|.+||+++++... +    ..+..++|||||++||.++.+   +  .|.
T Consensus        16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~   88 (347)
T 2gop_A           16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIW   88 (347)
T ss_dssp             EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred             EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence            3455566  999999862          4579999999887543 3    578899999999999987653   2  388


Q ss_pred             EEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC---------------------------Cc
Q psy15995        111 IWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI---------------------------SG  163 (683)
Q Consensus       111 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------------------------d~  163 (683)
                      +||+.+++....... +              . +..++|+|||+.|+.++.                           ..
T Consensus        89 ~~~~~~g~~~~l~~~-~--------------~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  152 (347)
T 2gop_A           89 VADLETLSSKKILEA-K--------------N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKT  152 (347)
T ss_dssp             EEETTTTEEEEEEEE-S--------------E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEE
T ss_pred             EEECCCCceEEEEcC-C--------------C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccc
Confidence            888887654322111 1              3 788999999999988763                           25


Q ss_pred             cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCc----e-EEEEEEccCCCceeeeecCCcCeEEEEee
Q psy15995        164 KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE----R-FGHVFMSETGTSVGEISGQSKPINSCDFK  238 (683)
Q Consensus       164 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  238 (683)
                      .|.+||+.+++.+.....   . .+..++|+||| .++++..+..    . ...+|.++ ......+..+ ..+..+  +
T Consensus       153 ~l~~~d~~~~~~~~~l~~---~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~-~~~~~~--s  223 (347)
T 2gop_A          153 TFWIFDTESEEVIEEFEK---P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGKEEKMFEK-VSFYAV--D  223 (347)
T ss_dssp             EEEEEETTTTEEEEEEEE---E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTEEEEEEEE-ESEEEE--E
T ss_pred             eEEEEECCCCeEEeeecC---C-CcccccCCCCe-EEEEEecccccccccccccEEEeC-CCceEEeccC-cceeeE--C
Confidence            799999988875222222   2 78899999999 6555543321    1 34566666 4344455545 555554  9


Q ss_pred             cCCCeEEEEeeCC--------CeEEEEcCCCCceeeeccccccCeEE-EEECCCCCEEEEEcCCCcEEEEeCCCCeeEEe
Q psy15995        239 PSRPFRIITGSED--------NTIAVFEGPPFKFKMTKQEHSRFVQA-VRYSPSGSHFASAGFDGKVFLYDGASADLVSE  309 (683)
Q Consensus       239 ~~~~~~l~~~~~d--------~~i~iw~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~  309 (683)
                      |+++. ++..+.+        ..|.+||  +++.......+...+.. +.|+ ++ .+++++.++.+++| +.+++....
T Consensus       224 pdg~~-l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~  297 (347)
T 2gop_A          224 SDGER-ILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPI  297 (347)
T ss_dssp             ECSSC-EEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEE
T ss_pred             CCCCE-EEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEE
Confidence            99996 5554433        4788888  56655555666777886 9999 88 88899999999999 876665444


Q ss_pred             ccCCccccCeEEEEEccCCCEEEEEECCCcE-EEEECC
Q psy15995        310 LGNPAHKGGVYAVAWKPDGTQLLTASGDKTC-KLWDIE  346 (683)
Q Consensus       310 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i-~iwd~~  346 (683)
                      +.   +...|.+++|+|  ..+++++.++.. .+|.+.
T Consensus       298 ~~---~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~  330 (347)
T 2gop_A          298 AK---GRHWIMGFDVDE--IVVYLKETATRLRELFTWD  330 (347)
T ss_dssp             EC---SSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred             ec---CCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence            32   567899999999  677777776664 777766

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.81  E-value=8.9e-17  Score=161.83  Aligned_cols=318  Identities=14%  Similarity=0.087  Sum_probs=220.8

Q ss_pred             CCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCC--CcccccccccccCC
Q psy15995         53 DPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTV--NKEHILKNEFHPIG  129 (683)
Q Consensus        53 s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~--~~~~~~~~~~~~~~  129 (683)
                      +|.+.++++. .++.|.++|..+++.+.++.. ...+..++|||||+++++++.|+.|.+||+.  +.+.+.++...   
T Consensus       164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G---  239 (567)
T 1qks_A          164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG---  239 (567)
T ss_dssp             CGGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC---
T ss_pred             CCCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC---
Confidence            3433344443 468999999999999887763 3356799999999999999999999999996  66555544332   


Q ss_pred             CCcccceeeeeecceeeeEee----ccceEEEeecC-CccEEEEeccccceeeeccccc--------c-CCCeeEEEEcC
Q psy15995        130 GPIKDIGTLLSLTSIRNILVL----SIGFYIASGDI-SGKVRIWDTVNKEHILKNEFHP--------I-GGPIKDIAWSP  195 (683)
Q Consensus       130 ~~~~~~~~~~~~~~i~~~~~s----~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~--------~-~~~i~~~~~s~  195 (683)
                                  .....++|+    |||+++++++. +++|.++|..+.+.+.......        + ...+..+..++
T Consensus       240 ------------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~  307 (567)
T 1qks_A          240 ------------SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASH  307 (567)
T ss_dssp             ------------SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECS
T ss_pred             ------------CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcC
Confidence                        446789999    69998887665 5899999999988765544322        1 12678899999


Q ss_pred             CCCeEEEEecCCceEEEEEEccCCCceee-eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc----
Q psy15995        196 DNQRMVVVGEGRERFGHVFMSETGTSVGE-ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE----  270 (683)
Q Consensus       196 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~----  270 (683)
                      ++..+++...+.. .+.+.+....+.... ..........+.|+|++++++++...++.|.++|..+++....+..    
T Consensus       308 ~~~~~vv~~~~~g-~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~  386 (567)
T 1qks_A          308 YRPEFIVNVKETG-KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQT  386 (567)
T ss_dssp             SSSEEEEEETTTT-EEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSS
T ss_pred             CCCEEEEEecCCC-eEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcC
Confidence            8877666554433 245555544332221 1123445678899999998777777889999999999987765543    


Q ss_pred             -cccCeEEEEECCCCCEE-EEEc-CCCcEEEEeCCC-------CeeEEeccCCccccCeEEEEEccCCCEEEEEEC----
Q psy15995        271 -HSRFVQAVRYSPSGSHF-ASAG-FDGKVFLYDGAS-------ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG----  336 (683)
Q Consensus       271 -~~~~v~~~~~~~~~~~l-~~~~-~dg~i~iw~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----  336 (683)
                       |.+.-..+ ++|++..+ ++.. .++.|.++|..+       .+.++.+..  ....-..+..+|+++++.+...    
T Consensus       387 Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~--~g~g~~~i~~~p~~~~l~v~~~~~~~  463 (567)
T 1qks_A          387 PHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPA--LGGGSLFIKTHPNSQYLYVDATLNPE  463 (567)
T ss_dssp             BCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC--SCSCCCCEECCTTCSEEEEECTTCSS
T ss_pred             CCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEec--CCCCCEEEEeCCCCCeEEEecCCCCC
Confidence             33212122 57875544 4443 468999999887       567777754  2233355778999999998763    


Q ss_pred             ---CCcEEEEECCCC-----cee-eEEEe-------cCcceeceEEEEecCCEEEEEec-----CCcEEEEecCC
Q psy15995        337 ---DKTCKLWDIETK-----SVV-SEFIM-------GNQVEDQQVSCLWQGDYLLTVSL-----SGFISYLDVNN  390 (683)
Q Consensus       337 ---dg~i~iwd~~~~-----~~~-~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~-----~g~i~~~~~~~  390 (683)
                         .+.|.++|+.+.     ... ..+..       ........+.+.++|+.+.++..     ++.|.++|..+
T Consensus       464 ~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t  538 (567)
T 1qks_A          464 AEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKT  538 (567)
T ss_dssp             HHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred             cccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCC
Confidence               358999999876     211 22211       12345677888899998887743     68999999887

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.80  E-value=6.3e-17  Score=171.52  Aligned_cols=279  Identities=11%  Similarity=-0.002  Sum_probs=194.6

Q ss_pred             CCCCCeEEEec--C----CeEEEEeCCCCccccc------ccCcccceEEEEECCCCcEEEEecCCC-----CEEEEeCC
Q psy15995         53 DPKGKNFLYTN--G----NSVIIRNIENPAISDI------YTEHSCAVNVAKYSPSGFYIASGDISG-----KVRIWDTV  115 (683)
Q Consensus        53 s~~~~~l~~~~--~----~~i~v~~~~~~~~~~~------~~~h~~~v~~~~~s~d~~~las~~~dg-----~i~iwd~~  115 (683)
                      +|||+++++..  +    +.+.+.+..+++....      -.+|...+..++|||||++||.+..++     +|++||+.
T Consensus        80 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~  159 (710)
T 2xdw_A           80 FKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD  159 (710)
T ss_dssp             EEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT
T ss_pred             EEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC
Confidence            49999999873  1    2556666655543311      224666899999999999998765433     79999999


Q ss_pred             CcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCcc----------------EEEEecccccee--e
Q psy15995        116 NKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGK----------------VRIWDTVNKEHI--L  177 (683)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~----------------i~iwd~~~~~~~--~  177 (683)
                      +++.+......               ..+..++|+|||+.|+.++.++.                |++|++.+++..  .
T Consensus       160 tg~~~~~~~~~---------------~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~  224 (710)
T 2xdw_A          160 GAKELPDVLER---------------VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDIL  224 (710)
T ss_dssp             TTEEEEEEEEE---------------ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEE
T ss_pred             CCCCCcccccC---------------cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceE
Confidence            98755321111               23567899999999999887765                999999887532  2


Q ss_pred             eccccccCCCeeEEEEcCCCCeEEEEecCC---ceEEEEEEccC------CC-ceeeeecCCcCeEEEEeecCCCeEEEE
Q psy15995        178 KNEFHPIGGPIKDIAWSPDNQRMVVVGEGR---ERFGHVFMSET------GT-SVGEISGQSKPINSCDFKPSRPFRIIT  247 (683)
Q Consensus       178 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~---~~~~~~~~~~~------~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~  247 (683)
                      ......+...+..+.|+|||++|+......   ...+.+++.++      +. ....+..+...+.. .|+|+++.+++.
T Consensus       225 v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~  303 (710)
T 2xdw_A          225 CAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFK  303 (710)
T ss_dssp             EECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEE
T ss_pred             EeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEE
Confidence            222223345678999999999999887532   34466777766      43 46667777776655 488888864555


Q ss_pred             eeCC---CeEEEEcCCCCce--eeecccccc--CeEEEEECCCCCEEEEEcCCCc--EEEEeCCCCeeEEeccCCccccC
Q psy15995        248 GSED---NTIAVFEGPPFKF--KMTKQEHSR--FVQAVRYSPSGSHFASAGFDGK--VFLYDGASADLVSELGNPAHKGG  318 (683)
Q Consensus       248 ~~~d---~~i~iw~~~~~~~--~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~--i~iw~~~~~~~~~~~~~~~~~~~  318 (683)
                      +..+   +.|.+||+.+++.  ...+..|..  .+..++|++++.++++...++.  |.+|++.+++.+..+..  +.+.
T Consensus       304 s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~--~~~~  381 (710)
T 2xdw_A          304 TNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPL--EVGS  381 (710)
T ss_dssp             ECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECC--CSSE
T ss_pred             ECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCC--CCce
Confidence            4433   4699999877642  233334433  6888999977778888888874  66778767877777765  5777


Q ss_pred             eEEEEEccCCCEEEEEEC----CCcEEEEECCCCc
Q psy15995        319 VYAVAWKPDGTQLLTASG----DKTCKLWDIETKS  349 (683)
Q Consensus       319 i~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~  349 (683)
                      +..++++|+++.++....    .+.+..||+.+++
T Consensus       382 v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          382 VVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             EEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             EEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            889999999876664422    4679999998876

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.79  E-value=1.7e-17  Score=175.24  Aligned_cols=300  Identities=11%  Similarity=0.003  Sum_probs=190.2

Q ss_pred             cccccCcccceEEEEECCCCcEEEEe--cCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEee--ccc
Q psy15995         78 SDIYTEHSCAVNVAKYSPSGFYIASG--DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVL--SIG  153 (683)
Q Consensus        78 ~~~~~~h~~~v~~~~~s~d~~~las~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s--~~~  153 (683)
                      ...+.+|...|..++|++++.++++.  +.++...||....+.....+..+..  .+.   ...+...-....++  |||
T Consensus        16 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~--~~~---~~~~~~~~~~~~~~~SPDg   90 (662)
T 3azo_A           16 AALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPW--NVR---NRVFEYSGFPWAGVPRPAG   90 (662)
T ss_dssp             HHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTC--CBC---CCGGGTCCCCEEEECCSSS
T ss_pred             HHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCc--ccc---ccccccCCccceeeeecCC
Confidence            34577899999999999988777777  6688899999654444444433321  000   00000001134455  999


Q ss_pred             eE-EEeecC-CccEEEEecc--c-cceeeeccccc---cCCCeeEEEEcCCCCeEEEEecCC------c--eEEEEEEcc
Q psy15995        154 FY-IASGDI-SGKVRIWDTV--N-KEHILKNEFHP---IGGPIKDIAWSPDNQRMVVVGEGR------E--RFGHVFMSE  217 (683)
Q Consensus       154 ~~-l~~~~~-d~~i~iwd~~--~-~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~~~------~--~~~~~~~~~  217 (683)
                      ++ |+..+. +..|.+|++.  . ++.. ......   +...+.+++|+|||+.|++++.+.      .  ..+.+|+.+
T Consensus        91 ~~~la~~~~~~~~l~~~~~~~~g~~~~~-~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~  169 (662)
T 3azo_A           91 GPLLVFTHFGDQRLYAFEPDAPGGAVPR-PLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLD  169 (662)
T ss_dssp             SCEEEEEBTTTCCEEEECTTSTTCCCCE-ECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETT
T ss_pred             CeEEEEEECCCCeEEEEcCCCCCCCCCE-eccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECC
Confidence            98 776554 5677777776  2 4322 222111   456788999999999999887642      1  235556665


Q ss_pred             CC-----Cceeeee-cCCcCeEEEEeecCCCeEEEEeeCC--------CeEEEEcCC-CC---ceeeeccccccCeEEEE
Q psy15995        218 TG-----TSVGEIS-GQSKPINSCDFKPSRPFRIITGSED--------NTIAVFEGP-PF---KFKMTKQEHSRFVQAVR  279 (683)
Q Consensus       218 ~~-----~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d--------~~i~iw~~~-~~---~~~~~~~~~~~~v~~~~  279 (683)
                      .+     .....+. .+...+..++|+|+|+. |+..+.+        ..|.+||+. ++   +.......|...+..++
T Consensus       170 ~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~-la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~  248 (662)
T 3azo_A          170 GSAAADRSAVRELSDDAHRFVTGPRLSPDGRQ-AVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAE  248 (662)
T ss_dssp             STTTTCGGGSEESSCSCSSEECCCEECTTSSE-EEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEE
T ss_pred             CCccccCCceeEEEecCCCcccCceECCCCCE-EEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceE
Confidence            51     3344555 66678889999999996 6655543        479999998 56   44444445678899999


Q ss_pred             ECCCCCEEEEEcCCC--cEEEEeCCCCeeEEeccCCccccC--------eEEEEEccCCCEEEEEECCCcEEEE--ECCC
Q psy15995        280 YSPSGSHFASAGFDG--KVFLYDGASADLVSELGNPAHKGG--------VYAVAWKPDGTQLLTASGDKTCKLW--DIET  347 (683)
Q Consensus       280 ~~~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~l~~~~~dg~i~iw--d~~~  347 (683)
                      |+|||+++++++.++  .|.+||..+++.......  +...        +..++|+|++++++++.. +..++|  |+.+
T Consensus       249 ~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~--~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~  325 (662)
T 3azo_A          249 WAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRR--EEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPES  325 (662)
T ss_dssp             ECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCC--SSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTT
T ss_pred             ECCCCeEEEEECCCCCeEEEEEECCCCceeecccc--cccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCC
Confidence            999999888888888  677777767766544432  2211        567899999999999988 999999  5555


Q ss_pred             CceeeEEEecCcceeceEEEEecCCEEEEE--ecCC--cEEEEecCC
Q psy15995        348 KSVVSEFIMGNQVEDQQVSCLWQGDYLLTV--SLSG--FISYLDVNN  390 (683)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~g--~i~~~~~~~  390 (683)
                      ++ +..+... ......+ .+++++.++..  +.+.  .+..+|+..
T Consensus       326 ~~-~~~l~~~-~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~  369 (662)
T 3azo_A          326 GE-LVDAAGP-WTEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVT  369 (662)
T ss_dssp             TE-EEECCSS-CCEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTT
T ss_pred             Cc-EEEecCC-CCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCC
Confidence            54 3333222 2222222 15566654433  3333  455555544

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.79  E-value=2.5e-17  Score=173.94  Aligned_cols=289  Identities=10%  Similarity=-0.008  Sum_probs=192.3

Q ss_pred             CCCeEEEeeCCCCCeEEEe--c-CCeEEEEeCCCCcccccccCcccceE---------EEEEC--CCCcE-EEEecC-CC
Q psy15995         44 RGQPIVLGGDPKGKNFLYT--N-GNSVIIRNIENPAISDIYTEHSCAVN---------VAKYS--PSGFY-IASGDI-SG  107 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~--~-~~~i~v~~~~~~~~~~~~~~h~~~v~---------~~~~s--~d~~~-las~~~-dg  107 (683)
                      ...+..+++|+++-+++..  . ++...||....+.....+..|...+.         ..+|+  |||++ ||.++. +.
T Consensus        23 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~  102 (662)
T 3azo_A           23 SGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQ  102 (662)
T ss_dssp             CSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTC
T ss_pred             CCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCC
Confidence            3467788889876555554  2 56788888544444556777777766         66565  99998 776543 56


Q ss_pred             CEEEEeCC--C-cccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC----------ccEEEEeccc--
Q psy15995        108 KVRIWDTV--N-KEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS----------GKVRIWDTVN--  172 (683)
Q Consensus       108 ~i~iwd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----------~~i~iwd~~~--  172 (683)
                      .|.+|++.  + ++ ...+...+.         ..+...+..++|+|||++|++++.+          ..|++||+.+  
T Consensus       103 ~l~~~~~~~~g~~~-~~~l~~~~~---------~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~  172 (662)
T 3azo_A          103 RLYAFEPDAPGGAV-PRPLTPVSA---------VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSA  172 (662)
T ss_dssp             CEEEECTTSTTCCC-CEECSCCCC---------STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTT
T ss_pred             eEEEEcCCCCCCCC-CEeccCCcc---------CCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCc
Confidence            67777765  2 32 222222100         0011457789999999999998877          5899999988  


Q ss_pred             ----cceeeecccc-ccCCCeeEEEEcCCCCeEEEEecCC------ceEEEEEEcc-CC---CceeeeecCCcCeEEEEe
Q psy15995        173 ----KEHILKNEFH-PIGGPIKDIAWSPDNQRMVVVGEGR------ERFGHVFMSE-TG---TSVGEISGQSKPINSCDF  237 (683)
Q Consensus       173 ----~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~~~------~~~~~~~~~~-~~---~~~~~~~~~~~~v~~~~~  237 (683)
                          ++...   +. .+...+..++|||||++|+.++.+.      ...+.+++.+ ++   +......+|...+..+.|
T Consensus       173 ~~~~~~~~~---l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~  249 (662)
T 3azo_A          173 AADRSAVRE---LSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEW  249 (662)
T ss_dssp             TTCGGGSEE---SSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEE
T ss_pred             cccCCceeE---EEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEE
Confidence                54322   22 3346788899999999999887553      2346777777 46   344444556789999999


Q ss_pred             ecCCCeEEEEeeCCC--eEEEEcCCCCceeeeccccccC--------eEEEEECCCCCEEEEEcCCCcEEEE--eCCCCe
Q psy15995        238 KPSRPFRIITGSEDN--TIAVFEGPPFKFKMTKQEHSRF--------VQAVRYSPSGSHFASAGFDGKVFLY--DGASAD  305 (683)
Q Consensus       238 ~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~dg~i~iw--~~~~~~  305 (683)
                      +|+++ +++++..++  .|.+||..+++.......+...        +..++|+|+++++++++. +.+++|  |..+++
T Consensus       250 spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~  327 (662)
T 3azo_A          250 APDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE  327 (662)
T ss_dssp             CTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred             CCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence            99999 588888888  6777777667655444433322        567899999999999998 999999  655565


Q ss_pred             eEEeccCCccccCeEEE-EEccCCCEEEEEECCC--cEEEEECCCCce
Q psy15995        306 LVSELGNPAHKGGVYAV-AWKPDGTQLLTASGDK--TCKLWDIETKSV  350 (683)
Q Consensus       306 ~~~~~~~~~~~~~i~~~-~~~~~~~~l~~~~~dg--~i~iwd~~~~~~  350 (683)
                       +..+..  +...+..+ +++++.-.+++.+.+.  .+.++|+.+++.
T Consensus       328 -~~~l~~--~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~  372 (662)
T 3azo_A          328 -LVDAAG--PWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA  372 (662)
T ss_dssp             -EEECCS--SCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred             -EEEecC--CCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence             455543  56667766 4443322333444443  456667767654

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.78  E-value=4.5e-16  Score=147.63  Aligned_cols=281  Identities=13%  Similarity=0.096  Sum_probs=195.9

Q ss_pred             CCCcEEEEeCCCCeeEEeccC----CccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEE
Q psy15995        292 FDGKVFLYDGASADLVSELGN----PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSC  367 (683)
Q Consensus       292 ~dg~i~iw~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  367 (683)
                      .++.|.++|.++++....+..    .........+++. +++.+++...++.|.+||..+++.+.++.            
T Consensus        15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~------------   81 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT------------   81 (328)
T ss_dssp             CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE------------
T ss_pred             CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC------------
Confidence            378999999999988765521    1122346777774 34555555567899999999988766541            


Q ss_pred             EecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCC---
Q psy15995        368 LWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGH---  444 (683)
Q Consensus       368 ~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~---  444 (683)
                                                       .......++++++++.+++...++.|.+||..+++.......+.   
T Consensus        82 ---------------------------------~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~  128 (328)
T 3dsm_A           82 ---------------------------------GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDM  128 (328)
T ss_dssp             ---------------------------------CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCT
T ss_pred             ---------------------------------CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccc
Confidence                                             12346778888888544444478999999999887765543322   


Q ss_pred             -CcceeEEEEeCCeEEEEE--cCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCC
Q psy15995        445 -GNQINGMKATGELLYTCG--IDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPID  521 (683)
Q Consensus       445 -~~~v~~~~~~~~~l~~~~--~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  521 (683)
                       ......+.+.++.++.+.  .++.|.++|..+...                                     ...++..
T Consensus       129 ~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~-------------------------------------~~~i~~g  171 (328)
T 3dsm_A          129 ESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKV-------------------------------------VDELTIG  171 (328)
T ss_dssp             TTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEE-------------------------------------EEEEECS
T ss_pred             cCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeE-------------------------------------EEEEEcC
Confidence             114455666777777776  488999999887532                                     2222333


Q ss_pred             CCCcEEEEccCCCEEEEEcCC----------CcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEE
Q psy15995        522 YEPSSISLDHEHGLVAVGGAD----------SKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLY  591 (683)
Q Consensus       522 ~~~~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~  591 (683)
                      ..+..++++|++++++++..+          +.|.++|..+++.......+.......++|+||+++|.++..  .|.+|
T Consensus       172 ~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~  249 (328)
T 3dsm_A          172 IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRM  249 (328)
T ss_dssp             SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEE
T ss_pred             CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEE
Confidence            456788999999987777655          789999999887765554433457899999999999988765  89999


Q ss_pred             ECCCCccccccceeeecccEEEEEecC-CCCeEEEe----ecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc
Q psy15995        592 RVPDFELAHNKEWGFHSAKVNCVAWSP-DSALVASG----SLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL  661 (683)
Q Consensus       592 ~~~~~~~~~~~~~~~h~~~v~~~~~s~-d~~~l~~~----~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~  661 (683)
                      |..++++........+......++++| ++++.++.    ..++.|.+||.. ++.+..+..   ......++|-
T Consensus       250 d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~---G~~P~~~~~~  320 (328)
T 3dsm_A          250 PVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV---GIIPGAFCWK  320 (328)
T ss_dssp             ETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE---EESEEEEEEE
T ss_pred             ECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe---ccCcceEEEe
Confidence            999888743222221246788999999 55555665    578899999998 887776654   2345566654

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.78  E-value=2.2e-17  Score=174.45  Aligned_cols=281  Identities=9%  Similarity=-0.059  Sum_probs=190.1

Q ss_pred             eCCCCCeEEEec--C----CeEEEEeCCCCcccccc------cCcccceEEEEECCCCcEEE-----EecCCCCEEEEeC
Q psy15995         52 GDPKGKNFLYTN--G----NSVIIRNIENPAISDIY------TEHSCAVNVAKYSPSGFYIA-----SGDISGKVRIWDT  114 (683)
Q Consensus        52 ~s~~~~~l~~~~--~----~~i~v~~~~~~~~~~~~------~~h~~~v~~~~~s~d~~~la-----s~~~dg~i~iwd~  114 (683)
                      .+|+|+++++..  +    ..+.+.+..+++....+      .+|...+..++|||||++||     .|+.+.+|++||+
T Consensus        75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl  154 (695)
T 2bkl_A           75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV  154 (695)
T ss_dssp             CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred             CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence            468999999873  2    34566665555443332      25677899999999999998     4445578999999


Q ss_pred             CCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCcc-------------EEEEeccccce--eeec
Q psy15995        115 VNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGK-------------VRIWDTVNKEH--ILKN  179 (683)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~-------------i~iwd~~~~~~--~~~~  179 (683)
                      .+++.+.......              .....++|+|||+.|+.++.+..             |++|++.++..  ....
T Consensus       155 ~tg~~~~~~~~~~--------------~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~  220 (695)
T 2bkl_A          155 DSGEWSKVDVIEG--------------GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH  220 (695)
T ss_dssp             TTCCBCSSCCBSC--------------CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE
T ss_pred             CCCCCcCCcccCc--------------ccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE
Confidence            9987541111110              11257899999999999888765             99999988762  2223


Q ss_pred             cccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccC-CCceeeeecCCcCeEEEEeecCCCeEEEEee---CCCeEE
Q psy15995        180 EFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSET-GTSVGEISGQSKPINSCDFKPSRPFRIITGS---EDNTIA  255 (683)
Q Consensus       180 ~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~d~~i~  255 (683)
                      ....+...+..+.|+|||+++++...+......+|.++. +.....+..+...+....+ +++. +++...   .++.|.
T Consensus       221 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~  298 (695)
T 2bkl_A          221 ERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVF  298 (695)
T ss_dssp             CCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEE
T ss_pred             ecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEE
Confidence            333344678899999999999888765412234555443 2345556666666666666 5666 466555   368999


Q ss_pred             EEcCCCCce---eeecccc-ccCeEEEEECCCCCEEEEEcCCCcEEEEeCC-CCeeEEeccCCccccCeEEEEEccCCCE
Q psy15995        256 VFEGPPFKF---KMTKQEH-SRFVQAVRYSPSGSHFASAGFDGKVFLYDGA-SADLVSELGNPAHKGGVYAVAWKPDGTQ  330 (683)
Q Consensus       256 iw~~~~~~~---~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~  330 (683)
                      +||+.+++.   ...+..+ ...+..++++ ++.++++...|+..++|.+. +++....+..+ ..+.+..++++|+++.
T Consensus       299 ~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~-~~~~v~~~~~s~d~~~  376 (695)
T 2bkl_A          299 EVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLP-GVGAASNLMGLEDLDD  376 (695)
T ss_dssp             EEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCS-SSSEECCCBSCTTCSE
T ss_pred             EEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCC-CCeEEEEeecCCCCCE
Confidence            999877653   3333333 4567888888 66788888889988877554 35555555431 2566778889999887


Q ss_pred             EEEEEC----CCcEEEEECCCCce
Q psy15995        331 LLTASG----DKTCKLWDIETKSV  350 (683)
Q Consensus       331 l~~~~~----dg~i~iwd~~~~~~  350 (683)
                      ++....    .+.+++||+.+++.
T Consensus       377 l~~~~ss~~~P~~v~~~d~~~g~~  400 (695)
T 2bkl_A          377 AYYVFTSFTTPRQIYKTSVSTGKS  400 (695)
T ss_dssp             EEEEEEETTEEEEEEEEETTTCCE
T ss_pred             EEEEEcCCCCCCEEEEEECCCCcE
Confidence            764432    46799999988764

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.78  E-value=8.8e-12  Score=133.89  Aligned_cols=562  Identities=10%  Similarity=0.065  Sum_probs=334.2

Q ss_pred             CCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccC--------cccceEEEEECCCCcEEEEecCCCCEEEEeCC
Q psy15995         44 RGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTE--------HSCAVNVAKYSPSGFYIASGDISGKVRIWDTV  115 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~--------h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~  115 (683)
                      .+.+.++.-.++|.+-+.+. +-+..||-.+-   ..+..        ....|.++...++|.+.+. +.+ -+..||..
T Consensus        42 ~n~v~~I~qD~~G~lWigT~-~GL~ryDG~~f---~~~~~~~~~~~~l~~n~I~~i~~d~~g~lWig-T~~-Gl~~yd~~  115 (795)
T 4a2l_A           42 QSTVFSIDQDKRGNMWFATY-DGVNKYDGYAF---TVYQHNEDDPNSIANDISRIVKTDSQGRVWIG-TRD-GLSRYDEE  115 (795)
T ss_dssp             SSCEEEEEECTTSCEEEEET-TEEEEECSSCE---EEECCCTTCTTSCSCSCEEEEEECTTSCEEEE-ESS-CEEEEETT
T ss_pred             cceeEEEEEcCCCCEEEeec-CcCcccCCCce---EEEeCCCCCCCcccccceeEEEECCCCCEEEE-eCC-chheeCCC
Confidence            46888998899986655444 45677775432   22221        2457999999999976554 444 48999987


Q ss_pred             CcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCC-eeEEEEc
Q psy15995        116 NKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGP-IKDIAWS  194 (683)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-i~~~~~s  194 (683)
                      +++... +......          ....|.++...++|...+...  +.|..||..+++...... ...... |.++...
T Consensus       116 ~~~f~~-~~~~~~~----------~~~~i~~i~~d~~g~lwi~t~--~gl~~~~~~~~~~~~~~~-~~~~~~~i~~i~~d  181 (795)
T 4a2l_A          116 KDIFQN-FFYEKNG----------KHLQVNGIEEISPEQLLISTP--EGLIMFDIKESKFIDDSF-STAMHKTIASTLYR  181 (795)
T ss_dssp             TTEEEE-ECCEETT----------EECCCCEEEEEETTEEEEEET--TEEEEEETTTTEEECSSS-CHHHHTCCEEEEEE
T ss_pred             CCeEEe-ccccccC----------CCceEEEEEECCCCCEEEEEC--CceEEEECCCCEEEeccC-CCCCCcceEEEEEC
Confidence            764321 1111100          001177888888887666544  458899987654321111 000123 7888888


Q ss_pred             CCCCeEEEEecCCceEEEEEEccCCCceeee-ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc---
Q psy15995        195 PDNQRMVVVGEGRERFGHVFMSETGTSVGEI-SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE---  270 (683)
Q Consensus       195 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~---  270 (683)
                      +++...+ +..+..  +..++.++++..... ......|.++...+++.  +..++.++.+..||..+.+.......   
T Consensus       182 ~~g~lwi-gt~~~G--l~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~--lwigt~~~Gl~~~~~~~~~~~~~~~~~~~  256 (795)
T 4a2l_A          182 QGDQIYI-GTSTDG--LYTYSITQKTFEKVIPILGTKQIQAILQQSPTR--IWVATEGAGLFLINPKTKEIKNYLHSPSN  256 (795)
T ss_dssp             ETTEEEE-EESSSC--EEEEETTTCCEEECC----CCCEEEEEEEETTE--EEEEEBSSCEEEEETTTTEEEEECCCTTC
T ss_pred             CCCCEEE-EECCCC--EEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC--EEEEECCCCeEEEeCCCCeEEEeecCCCC
Confidence            8886555 333211  455665555433221 12356788888888875  55566555588999777654433221   


Q ss_pred             ----cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC-----ccccCeEEEEEccCCCEEEEEECCCcEE
Q psy15995        271 ----HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP-----AHKGGVYAVAWKPDGTQLLTASGDKTCK  341 (683)
Q Consensus       271 ----~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~  341 (683)
                          ....|.++...++|.+.+ |+.+ -|.+|+..+++.......+     .....|.++...++|. |..|+.++-|.
T Consensus       257 ~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~  333 (795)
T 4a2l_A          257 PKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLN  333 (795)
T ss_dssp             TTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEE
T ss_pred             ccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeE
Confidence                245699999999887544 4445 5899998877654432211     1346799999998887 56677767788


Q ss_pred             EEECCCCceeeEEEecC---c-ceeceEEEEec-CCEEEEEecCCcEEEEecCCCCcceeeee---------eccccEEE
Q psy15995        342 LWDIETKSVVSEFIMGN---Q-VEDQQVSCLWQ-GDYLLTVSLSGFISYLDVNNPSTPIRVIK---------GHNKPITA  407 (683)
Q Consensus       342 iwd~~~~~~~~~~~~~~---~-~~~~~~~~~~~-~~~l~~~~~~g~i~~~~~~~~~~~~~~~~---------~~~~~v~~  407 (683)
                      .++..++... .+....   . ......++..+ ...+.+|+.++-+..|+.....-  ..+.         .....|.+
T Consensus       334 ~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~~l~~~~v~~  410 (795)
T 4a2l_A          334 YYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRF--TSYTLQEDESARGIGSNNIKA  410 (795)
T ss_dssp             EECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCE--EEECCC------CCSCSCEEE
T ss_pred             EeCCCcccce-EEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcE--EEEecCCCCcccCCCCccEEE
Confidence            9987655432 221111   1 11122233332 34577788888899998765321  1111         12357899


Q ss_pred             EEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccC---CCCcceeEEEEe-CCeEEEEEcCCeEEEEeCCCCcccCCcee
Q psy15995        408 LALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGA---GHGNQINGMKAT-GELLYTCGIDDTIKQVDLSSNAYSGPEVK  483 (683)
Q Consensus       408 ~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~---~~~~~v~~~~~~-~~~l~~~~~d~~i~~~~~~~~~~~~~~~~  483 (683)
                      +...++++.|..|+.++-|..+|..+++.......   .....|.++..+ ...|..++. +-+..++..+.........
T Consensus       411 i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~  489 (795)
T 4a2l_A          411 VYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKE  489 (795)
T ss_dssp             EEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBC
T ss_pred             EEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEcccc
Confidence            99988888566677777799999887765443211   234567888777 456666666 5588888766432111000


Q ss_pred             cCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcce----
Q psy15995        484 LGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKA----  559 (683)
Q Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----  559 (683)
                        ..+.                           . .....+.++...+++++.+...  +-+..|+..++.. ...    
T Consensus       490 --~~~~---------------------------~-~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~  536 (795)
T 4a2l_A          490 --KDGT---------------------------P-VVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-QKASILP  536 (795)
T ss_dssp             --TTCC---------------------------B-CCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE-EECCCSC
T ss_pred             --cccc---------------------------c-cCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-EEecCCC
Confidence              0000                           0 0123467788888887666554  4588898877654 111    


Q ss_pred             -eecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccce-eeecccEEEEEecCCCCeEEEeecCCcEEEEeC
Q psy15995        560 -ELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEW-GFHSAKVNCVAWSPDSALVASGSLDTTIIIWSL  637 (683)
Q Consensus       560 -~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~-~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~  637 (683)
                       ..-....|.++...++|.+.++.. . -+..||..+++....... +.....|.++...++|++.+++  ++-|..|+.
T Consensus       537 ~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~  612 (795)
T 4a2l_A          537 VSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGISCFNP  612 (795)
T ss_dssp             SCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEET
T ss_pred             CCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc--CCceEEEcC
Confidence             001345789999999998776654 3 588899887665432111 1124568899999999877665  345888998


Q ss_pred             CCCceeeEeec--CCCCCCe--eEEEEccCCeEEEeeCCCcE
Q psy15995        638 ASPAKHIIIKN--AHPQSQI--TRLQWLDNDLLVSVGQDCNT  675 (683)
Q Consensus       638 ~~~~~~~~~~~--~~~~~~v--~~l~~~~~~~l~s~~~d~~v  675 (683)
                      .+.+.. .+..  +-....+  .++....++.|..++.+|-+
T Consensus       613 ~~~~~~-~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~Gl~  653 (795)
T 4a2l_A          613 ETEKFR-NFTESDGLQSNQFNTASYCRTSVGQMYFGGINGIT  653 (795)
T ss_dssp             TTTEEE-EECGGGTCSCSCEEEEEEEECTTSCEEEEETTEEE
T ss_pred             CCCcEE-EcCCcCCCccccCccCceeECCCCeEEEecCCceE
Confidence            776543 2211  1112233  34554555567777777743

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.78  E-value=1.1e-16  Score=152.15  Aligned_cols=253  Identities=13%  Similarity=0.100  Sum_probs=182.9

Q ss_pred             cCCCeEEEeeCCCCCeEEEecCC-------------------------eEEEEeCCCCccccccc-CcccceEEEEECCC
Q psy15995         43 QRGQPIVLGGDPKGKNFLYTNGN-------------------------SVIIRNIENPAISDIYT-EHSCAVNVAKYSPS   96 (683)
Q Consensus        43 ~~~~~~~~~~s~~~~~l~~~~~~-------------------------~i~v~~~~~~~~~~~~~-~h~~~v~~~~~s~d   96 (683)
                      .-+.+..++++|+|+++++..++                         .|.+||.++++.+..+. ++-.....++++|+
T Consensus        22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~  101 (329)
T 3fvz_A           22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD  101 (329)
T ss_dssp             CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred             ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence            34788999999999999887554                         69999999888776554 45568899999999


Q ss_pred             CcEEEEecCCCCEEEEeCCCcc-cccccccccCCCCcccceeeeeecceeeeEeec-cceEEEeec-CCccEEEEecccc
Q psy15995         97 GFYIASGDISGKVRIWDTVNKE-HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS-IGFYIASGD-ISGKVRIWDTVNK  173 (683)
Q Consensus        97 ~~~las~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~-~d~~i~iwd~~~~  173 (683)
                      |+++++...++.|++||..... .+..+......+.     ..........++++| ++..+++.+ .++.|++||. ++
T Consensus       102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~-----~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g  175 (329)
T 3fvz_A          102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGS-----DQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SG  175 (329)
T ss_dssp             SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCC-----STTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TS
T ss_pred             CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCC-----CccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CC
Confidence            9988888889999999986542 3333211100000     001124578999999 788888876 6899999994 45


Q ss_pred             ceeeeccccc--------cCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeee--cCCcCeEEEEeec----
Q psy15995        174 EHILKNEFHP--------IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS--GQSKPINSCDFKP----  239 (683)
Q Consensus       174 ~~~~~~~~~~--------~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~----  239 (683)
                      +.+.......        .-.....++++|++..++++..... .+.+|+.++++.+..+.  .+...+..++|+|    
T Consensus       176 ~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~-~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~  254 (329)
T 3fvz_A          176 KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG-RIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLF  254 (329)
T ss_dssp             CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT-EEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEE
T ss_pred             CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC-EEEEEECCCCcEEEEEeccccCCCcceeeecCCEEE
Confidence            5443332211        1134789999999666666655443 36788888888887774  4667889999999    


Q ss_pred             --CCCeEEEEeeCCCeEEEEcCCCCceeeec---cccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCC
Q psy15995        240 --SRPFRIITGSEDNTIAVFEGPPFKFKMTK---QEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS  303 (683)
Q Consensus       240 --~~~~~l~~~~~d~~i~iw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~  303 (683)
                        ++.. .++...+..|++|+..+++.+..+   ..+...+..++++|+|..+++...++.|++|++..
T Consensus       255 ~~~g~~-~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          255 AVNGKP-YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             EEECCC-CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred             EeCCCE-EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence              2221 222233558999999999988877   36677899999999998888888899999999653

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.77  E-value=6.8e-16  Score=144.12  Aligned_cols=242  Identities=14%  Similarity=0.146  Sum_probs=167.5

Q ss_pred             CCCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCccccccc------CcccceEEEEE-CCCCcEEEEecC-CCCEEEEeC
Q psy15995         44 RGQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYT------EHSCAVNVAKY-SPSGFYIASGDI-SGKVRIWDT  114 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~------~h~~~v~~~~~-s~d~~~las~~~-dg~i~iwd~  114 (683)
                      -..+..++++|+|+++++. .++.|.+||.+ ++....+.      +|...+..+++ .++++++++... ++.|.+|| 
T Consensus        29 ~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-  106 (286)
T 1q7f_A           29 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-  106 (286)
T ss_dssp             BSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-
T ss_pred             cCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-
Confidence            3568889999999987775 57899999987 44444443      35567899999 578887777643 78999999 


Q ss_pred             CCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEc
Q psy15995        115 VNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWS  194 (683)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s  194 (683)
                      .+++.+..+....             ...+..+++.++|+.+++...++.|.+||... +.+......            
T Consensus       107 ~~g~~~~~~~~~~-------------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~------------  160 (286)
T 1q7f_A          107 QYGQFVRKFGATI-------------LQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKFGCS------------  160 (286)
T ss_dssp             TTSCEEEEECTTT-------------CSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEEECT------------
T ss_pred             CCCcEEEEecCcc-------------CCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CEEEEeCCC------------
Confidence            5555544332211             14567899999999888888888999998643 222111100            


Q ss_pred             CCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecccc--c
Q psy15995        195 PDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH--S  272 (683)
Q Consensus       195 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--~  272 (683)
                                                      .+...+..+++++++. ++++...++.|++|+. .++.+..+..+  .
T Consensus       161 --------------------------------~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~  206 (286)
T 1q7f_A          161 --------------------------------KHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNY-EGQYLRQIGGEGIT  206 (286)
T ss_dssp             --------------------------------TTCSSEEEEEECSSSE-EEEEEGGGTEEEEEET-TCCEEEEESCTTTS
T ss_pred             --------------------------------CccCCcEEEEECCCCC-EEEEECCCCEEEEEcC-CCCEEEEEccCCcc
Confidence                                            1122355666666665 3556566788888886 34444444332  3


Q ss_pred             cCeEEEEECCCCCEEEEEcCCC-cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCc
Q psy15995        273 RFVQAVRYSPSGSHFASAGFDG-KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       273 ~~v~~~~~~~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      ..+..++++++|+++++...++ .|.+|+. +++.+..+........+.+++++|+++++++ +.++.|++|++....
T Consensus       207 ~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~  282 (286)
T 1q7f_A          207 NYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA  282 (286)
T ss_dssp             CSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred             CCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence            6789999999999888887775 9999995 5666666643223345789999999986666 678999999986543

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.77  E-value=4.8e-16  Score=145.17  Aligned_cols=248  Identities=12%  Similarity=0.119  Sum_probs=171.0

Q ss_pred             ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccC----CccccCeEEEEEc-cCCCEEEEEEC-CCcEEEE
Q psy15995        270 EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN----PAHKGGVYAVAWK-PDGTQLLTASG-DKTCKLW  343 (683)
Q Consensus       270 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~----~~~~~~i~~~~~~-~~~~~l~~~~~-dg~i~iw  343 (683)
                      ++-..+.+++++++++++++...++.|.+||.. ++.+..+..    ..+...+..+++. ++++++++... ++.|.+|
T Consensus        27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~  105 (286)
T 1q7f_A           27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY  105 (286)
T ss_dssp             TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred             CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence            455678999999999988888889999999976 655555532    1244578999994 66665555533 7889999


Q ss_pred             ECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCC
Q psy15995        344 DIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHD  423 (683)
Q Consensus       344 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  423 (683)
                      | .+++.+..+.                                           ..+...+.+++++|+++.+++...+
T Consensus       106 d-~~g~~~~~~~-------------------------------------------~~~~~~~~~i~~~~~g~l~v~~~~~  141 (286)
T 1q7f_A          106 N-QYGQFVRKFG-------------------------------------------ATILQHPRGVTVDNKGRIIVVECKV  141 (286)
T ss_dssp             C-TTSCEEEEEC-------------------------------------------TTTCSCEEEEEECTTSCEEEEETTT
T ss_pred             C-CCCcEEEEec-------------------------------------------CccCCCceEEEEeCCCCEEEEECCC
Confidence            9 4455433220                                           0123457889999999988887778


Q ss_pred             CcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEe
Q psy15995        424 GFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTV  503 (683)
Q Consensus       424 g~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (683)
                      +.|.+||.. ++......                              ..                              
T Consensus       142 ~~i~~~~~~-g~~~~~~~------------------------------~~------------------------------  160 (286)
T 1q7f_A          142 MRVIIFDQN-GNVLHKFG------------------------------CS------------------------------  160 (286)
T ss_dssp             TEEEEECTT-SCEEEEEE------------------------------CT------------------------------
T ss_pred             CEEEEEcCC-CCEEEEeC------------------------------CC------------------------------
Confidence            899999854 22211110                              00                              


Q ss_pred             ceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceee-cCCcCeeEEEECCCCCEEEEE
Q psy15995        504 KQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL-DHLGPVTDCSFSPSNEYLVAS  582 (683)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~  582 (683)
                                     .....+..++++++++++++...++.|++|+....... .... ++...+..++++++|+++++.
T Consensus       161 ---------------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~-~~~~~g~~~~p~~i~~d~~G~l~v~~  224 (286)
T 1q7f_A          161 ---------------KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLR-QIGGEGITNYPIGVGINSNGEILIAD  224 (286)
T ss_dssp             ---------------TTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEE-EESCTTTSCSEEEEEECTTCCEEEEE
T ss_pred             ---------------CccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEE-EEccCCccCCCcEEEECCCCCEEEEe
Confidence                           00123578899999998888788899999997554322 2211 123578999999999988888


Q ss_pred             eCCC-eEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCc
Q psy15995        583 DAHR-KVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPA  641 (683)
Q Consensus       583 ~~d~-~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~  641 (683)
                      ..++ .|.+|+.. ++.+...........+.+++++|+|+++++ +.|+.|++|++....
T Consensus       225 ~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~  282 (286)
T 1q7f_A          225 NHNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA  282 (286)
T ss_dssp             CSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred             CCCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence            8776 99999964 444433322112234789999999987777 679999999986643

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.77  E-value=1.8e-16  Score=151.78  Aligned_cols=274  Identities=11%  Similarity=0.005  Sum_probs=188.1

Q ss_pred             CeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccc
Q psy15995         46 QPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNE  124 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~  124 (683)
                      .+..++|+|++..++.. .++.+..|   .++....+.++...+.+++|+|+|++++++..++.|.+||..+++......
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~   83 (333)
T 2dg1_A            7 DLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV   83 (333)
T ss_dssp             CCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred             ccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee
Confidence            45667788888776654 56678888   344555667777788999999999988888889999999998775433221


Q ss_pred             cccCCCCcccceeeeeecceeeeEeeccceEEEeecCC----ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeE
Q psy15995        125 FHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS----GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRM  200 (683)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  200 (683)
                      ..              ...+..++++++|+++++...+    +.|.+||..+++.............+.+++++|+|+.+
T Consensus        84 ~~--------------~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~  149 (333)
T 2dg1_A           84 SH--------------KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFY  149 (333)
T ss_dssp             CS--------------SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEE
T ss_pred             CC--------------CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEE
Confidence            11              1568899999999988887766    68999999887643121111234578999999999876


Q ss_pred             EEEecC--CceEEEEEEccCC-CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC-Cceeee--------c
Q psy15995        201 VVVGEG--RERFGHVFMSETG-TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP-FKFKMT--------K  268 (683)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~--------~  268 (683)
                      ++...+  ......++.++.. .....+..+...+..++|+|+++.++++.+.++.|.+|+..+ ++....        +
T Consensus       150 v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~  229 (333)
T 2dg1_A          150 FTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYF  229 (333)
T ss_dssp             EEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEEC
T ss_pred             EEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEec
Confidence            655431  0111345555432 233333344456889999999986556666789999999863 332211        1


Q ss_pred             cccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCcc----ccCeEEEEEccCCCEEEEEECCC
Q psy15995        269 QEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAH----KGGVYAVAWKPDGTQLLTASGDK  338 (683)
Q Consensus       269 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~dg  338 (683)
                      .++ ..+..++++++|+++++...++.|.+||. +++.+..+..+..    ...+.+++|+||++.|+.++.++
T Consensus       230 ~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g  301 (333)
T 2dg1_A          230 TGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI  301 (333)
T ss_dssp             CSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred             CCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence            122 46788999999998777777789999997 5666666543211    12688999999988777666654

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.77  E-value=3.1e-16  Score=149.15  Aligned_cols=247  Identities=16%  Similarity=0.099  Sum_probs=178.1

Q ss_pred             ccceEEEEECCCCcEEEEecCC------------------------CCEEEEeCCCcccccccccccCCCCcccceeeee
Q psy15995         85 SCAVNVAKYSPSGFYIASGDIS------------------------GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLS  140 (683)
Q Consensus        85 ~~~v~~~~~s~d~~~las~~~d------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (683)
                      -+.+.+++++|+|+++++...+                        ++|.+||..+++.+......             .
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-------------~   89 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKN-------------L   89 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTT-------------T
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCC-------------c
Confidence            4679999999999999888777                        47999999888765433211             1


Q ss_pred             ecceeeeEeeccceEEEeecCCccEEEEeccccc-eeeeccc-------cccCCCeeEEEEcC-CCCeEEEEecCCceEE
Q psy15995        141 LTSIRNILVLSIGFYIASGDISGKVRIWDTVNKE-HILKNEF-------HPIGGPIKDIAWSP-DNQRMVVVGEGRERFG  211 (683)
Q Consensus       141 ~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~-------~~~~~~i~~~~~s~-~~~~l~~~~~~~~~~~  211 (683)
                      ...+..++++++|+.+++...++.|++||..... .+.....       ..+......++++| ++..+++-+... ..+
T Consensus        90 ~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~-~~I  168 (329)
T 3fvz_A           90 FYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN-SRI  168 (329)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC-CEE
T ss_pred             cCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC-CeE
Confidence            1457789999999999998889999999986542 2222111       12234688999999 565555443222 225


Q ss_pred             EEEEccCCCceeeeecC----------CcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc--ccccCeEEEE
Q psy15995        212 HVFMSETGTSVGEISGQ----------SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ--EHSRFVQAVR  279 (683)
Q Consensus       212 ~~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~  279 (683)
                      .+++ ..++.+..+...          -.....++++|++..++++...++.|++|+..+++.+..+.  .+...+..++
T Consensus       169 ~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~  247 (329)
T 3fvz_A          169 VQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAIS  247 (329)
T ss_dssp             EEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEE
T ss_pred             EEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceee
Confidence            5555 456666555322          23488999999955568888889999999998888877763  4567788999


Q ss_pred             ECCCCCEEEE-------EcCCCcEEEEeCCCCeeEEeccC-CccccCeEEEEEccCCCEEEEEECCCcEEEEECCC
Q psy15995        280 YSPSGSHFAS-------AGFDGKVFLYDGASADLVSELGN-PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIET  347 (683)
Q Consensus       280 ~~~~~~~l~~-------~~~dg~i~iw~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~  347 (683)
                      ++| +..+++       ...+..|++|+..+++.+..+.. ..+...+..++++|+|..+++...++.|++|++..
T Consensus       248 ~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          248 YIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             EET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred             ecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence            999 333333       23345899999999998888742 23667789999999998888888899999999764

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.76  E-value=1e-15  Score=145.24  Aligned_cols=272  Identities=10%  Similarity=-0.011  Sum_probs=193.3

Q ss_pred             CCeEEEEeCCCCccccccc------CcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCccccee
Q psy15995         64 GNSVIIRNIENPAISDIYT------EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGT  137 (683)
Q Consensus        64 ~~~i~v~~~~~~~~~~~~~------~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  137 (683)
                      ++.|.++|.++++....+.      ........+++. +++..++...++.|.+||..+++.+.++...           
T Consensus        16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~-----------   83 (328)
T 3dsm_A           16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGF-----------   83 (328)
T ss_dssp             CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECC-----------
T ss_pred             CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCC-----------
Confidence            5799999999988765441      122446778874 4556666677889999999999877766321           


Q ss_pred             eeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccc---cCCCeeEEEEcCCCCeEEEEecCCceEEEEE
Q psy15995        138 LLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHP---IGGPIKDIAWSPDNQRMVVVGEGRERFGHVF  214 (683)
Q Consensus       138 ~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~  214 (683)
                          .....++++++++..++...++.|.+||..+++.........   .......+++  ++..++++..+....+.++
T Consensus        84 ----~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~vi  157 (328)
T 3dsm_A           84 ----TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKI  157 (328)
T ss_dssp             ----SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEE
T ss_pred             ----CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEE
Confidence                457788999999665555578999999999987654444322   0115567777  5666666654323347888


Q ss_pred             EccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCC----------CeEEEEcCCCCceeeecccc-ccCeEEEEECCC
Q psy15995        215 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSED----------NTIAVFEGPPFKFKMTKQEH-SRFVQAVRYSPS  283 (683)
Q Consensus       215 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----------~~i~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~  283 (683)
                      +.++++....+... .....+.++|+++. ++++..+          +.|.++|..+++....+... ......++++|+
T Consensus       158 D~~t~~~~~~i~~g-~~p~~i~~~~dG~l-~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d  235 (328)
T 3dsm_A          158 DTETDKVVDELTIG-IQPTSLVMDKYNKM-WTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGT  235 (328)
T ss_dssp             ETTTTEEEEEEECS-SCBCCCEECTTSEE-EEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTT
T ss_pred             ECCCCeEEEEEEcC-CCccceEEcCCCCE-EEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecC
Confidence            98888887777653 34578899999974 5555443          78999999988877665432 246899999999


Q ss_pred             CCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccC-CCEEEEE----ECCCcEEEEECCCCceeeEEEecC
Q psy15995        284 GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPD-GTQLLTA----SGDKTCKLWDIETKSVVSEFIMGN  358 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~----~~dg~i~iwd~~~~~~~~~~~~~~  358 (683)
                      ++.|+++..  .|.+||..+++.......+........++++|+ +..+++.    ..++.|.+||.. ++.+.++..+.
T Consensus       236 ~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~  312 (328)
T 3dsm_A          236 RDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGI  312 (328)
T ss_dssp             SCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEE
T ss_pred             CCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEecc
Confidence            999888765  899999988876422111112467899999995 4444554    467899999998 88888876543

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.75  E-value=5.8e-12  Score=135.27  Aligned_cols=525  Identities=11%  Similarity=0.045  Sum_probs=314.3

Q ss_pred             CCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcc-c---ceEEEEECCCCcEEEEecCCCCEEEEeCCCccc
Q psy15995         44 RGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHS-C---AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH  119 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~-~---~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~  119 (683)
                      .+.+.++...++|.+.+.+. +.+..||..+.+... +.... .   .|.++...++|++.+... + .|..||..+++.
T Consensus        87 ~n~I~~i~~d~~g~lWigT~-~Gl~~yd~~~~~f~~-~~~~~~~~~~~i~~i~~d~~g~lwi~t~-~-gl~~~~~~~~~~  162 (795)
T 4a2l_A           87 NDISRIVKTDSQGRVWIGTR-DGLSRYDEEKDIFQN-FFYEKNGKHLQVNGIEEISPEQLLISTP-E-GLIMFDIKESKF  162 (795)
T ss_dssp             CSCEEEEEECTTSCEEEEES-SCEEEEETTTTEEEE-ECCEETTEECCCCEEEEEETTEEEEEET-T-EEEEEETTTTEE
T ss_pred             ccceeEEEECCCCCEEEEeC-CchheeCCCCCeEEe-ccccccCCCceEEEEEECCCCCEEEEEC-C-ceEEEECCCCEE
Confidence            46788998899998877665 458999988765433 22221 1   188999888997766543 4 599999876543


Q ss_pred             ccccccccCCCCcccceeeeeecc-eeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCC
Q psy15995        120 ILKNEFHPIGGPIKDIGTLLSLTS-IRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQ  198 (683)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  198 (683)
                      .......             .... +.++...+++...+ ++.++.|..||..+++..... .......|.++...+++.
T Consensus       163 ~~~~~~~-------------~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~-~~~~~~~i~~i~~d~~g~  227 (795)
T 4a2l_A          163 IDDSFST-------------AMHKTIASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVI-PILGTKQIQAILQQSPTR  227 (795)
T ss_dssp             ECSSSCH-------------HHHTCCEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC-----CCCEEEEEEEETTE
T ss_pred             EeccCCC-------------CCCcceEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEec-CCCCCCeeEEEEEcCCCC
Confidence            2111000             0123 77788888887665 454445888998776533211 112246788888888777


Q ss_pred             eEEEEecCCceEEEEEEccCCCceeeeec-------CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc--
Q psy15995        199 RMVVVGEGRERFGHVFMSETGTSVGEISG-------QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ--  269 (683)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--  269 (683)
                      ..+....++   +..++.++++.......       ....|.++...+++.  +..|+.+ -+.+|+..+.+......  
T Consensus       228 lwigt~~~G---l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~--lWigt~~-Gl~~~~~~~~~~~~~~~~~  301 (795)
T 4a2l_A          228 IWVATEGAG---LFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNR--LWIGTFN-DLNIYHEGTDSFASYSSNP  301 (795)
T ss_dssp             EEEEEBSSC---EEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSC--EEEEESS-CEEEEETTTTEEEEECCCT
T ss_pred             EEEEECCCC---eEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCC--EEEEeCC-hhheEcCCCCeEEEEecCC
Confidence            555443322   45666555433222111       235699999998886  5555555 58889977766543321  


Q ss_pred             -----ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccC----CccccCeEEEEEccCCCEEEEEECCCcE
Q psy15995        270 -----EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN----PAHKGGVYAVAWKPDGTQLLTASGDKTC  340 (683)
Q Consensus       270 -----~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i  340 (683)
                           -....|.++...++|. |..|+.++-|..++..++........    ......|.++...+++. |..|+.++-|
T Consensus       302 ~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl  379 (795)
T 4a2l_A          302 VENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGL  379 (795)
T ss_dssp             TSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCE
T ss_pred             CCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCe
Confidence                 1235799999999987 45566677799998765543322111    01345699999988876 5567777779


Q ss_pred             EEEECCCCceeeEEEec-------CcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeee-----eccccEEEE
Q psy15995        341 KLWDIETKSVVSEFIMG-------NQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIK-----GHNKPITAL  408 (683)
Q Consensus       341 ~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~-----~~~~~v~~~  408 (683)
                      ..|+..+++...-....       .......+....++..+.+|+.++.+..+|...+.  ...+.     .....|.++
T Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~--~~~~~~~~~~l~~~~v~~i  457 (795)
T 4a2l_A          380 NLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ--VENFNQRNSQLVNENVYAI  457 (795)
T ss_dssp             EEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC--EEEECTTTSCCSCSCEEEE
T ss_pred             EEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc--EEEeecCCCCcCCCeeEEE
Confidence            99998876543221110       11223333334455548888887889999987532  12221     134578999


Q ss_pred             EEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccC-----CCCcceeEEEEe-CCeEEEEEcCCeEEEEeCCCCcccCCce
Q psy15995        409 ALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGA-----GHGNQINGMKAT-GELLYTCGIDDTIKQVDLSSNAYSGPEV  482 (683)
Q Consensus       409 ~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~-----~~~~~v~~~~~~-~~~l~~~~~d~~i~~~~~~~~~~~~~~~  482 (683)
                      ...+++...+.. . +-+..||..+++.......     .....|.++..+ ...+..++. +-+..|+..+... .  .
T Consensus       458 ~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~-~--~  531 (795)
T 4a2l_A          458 LPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI-Q--K  531 (795)
T ss_dssp             EECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE-E--E
T ss_pred             EECCCCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE-E--E
Confidence            988888766554 4 4588899877654333211     123567788777 556666666 5677887665432 0  0


Q ss_pred             ecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceee-
Q psy15995        483 KLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL-  561 (683)
Q Consensus       483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-  561 (683)
                      ...                           .. ........+.++...+++.+.+... . -+..||..+++....... 
T Consensus       532 ~~~---------------------------~~-~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~~~~~~  581 (795)
T 4a2l_A          532 ASI---------------------------LP-VSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIKRYNTTN  581 (795)
T ss_dssp             CCC---------------------------SC-SCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEEECGGG
T ss_pred             ecC---------------------------CC-CCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEEEeCCCC
Confidence            000                           00 0001123567788888888665543 3 588899877654321111 


Q ss_pred             c-CCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceee-ecccE--EEEEecCCCCeEEEeecCCcEEEEeC
Q psy15995        562 D-HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGF-HSAKV--NCVAWSPDSALVASGSLDTTIIIWSL  637 (683)
Q Consensus       562 ~-~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-h~~~v--~~~~~s~d~~~l~~~~~d~~v~iw~~  637 (683)
                      + ....|.++...++|++.+++  ++-+..|+..+++........+ ....+  .++...++|++++ |+.+| +..++.
T Consensus       582 gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~~G-l~~~~p  657 (795)
T 4a2l_A          582 GLPNNVVYGILEDSFGRLWLST--NRGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYF-GGING-ITTFRP  657 (795)
T ss_dssp             TCSCSCEEEEEECTTSCEEEEE--TTEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEE-EETTE-EEEECG
T ss_pred             CCchhheEEEEECCCCCEEEEc--CCceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEE-ecCCc-eEEEcH
Confidence            1 24568899999999877766  3558888988766532111100 11222  5677788887555 55566 555554

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.74  E-value=3.7e-16  Score=165.66  Aligned_cols=283  Identities=7%  Similarity=-0.088  Sum_probs=185.5

Q ss_pred             CCCCCceeecCCCCCCc--eeeecc----cceeec---CCCcccCCCeEEEeeCCCCCeEEEec--CC----eEEEEeCC
Q psy15995          9 TQRGQPIVLGGDPKGKN--FLYTNG----NKYIFA---TLPRTQRGQPIVLGGDPKGKNFLYTN--GN----SVIIRNIE   73 (683)
Q Consensus         9 ~p~~~~~~~~~~~~~~~--~~~~~~----~~~~~~---~~~~~~~~~~~~~~~s~~~~~l~~~~--~~----~i~v~~~~   73 (683)
                      +|+|+.+...-...+..  .++...    ..+++.   .+.......+..++|||||++||++.  +|    .|++||++
T Consensus        80 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~  159 (710)
T 2xdw_A           80 FKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD  159 (710)
T ss_dssp             EEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT
T ss_pred             EEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC
Confidence            38998887654444332  333321    112221   12222223467789999999999873  22    89999999


Q ss_pred             CCcccccccCcccceEEEEECCCCcEEEEecCCCC----------------EEEEeCCCcccccccccccCCCCccccee
Q psy15995         74 NPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGK----------------VRIWDTVNKEHILKNEFHPIGGPIKDIGT  137 (683)
Q Consensus        74 ~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~----------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  137 (683)
                      +++.+.... ....+..++|||||+.|+.++.++.                |++|++.++.....+......        
T Consensus       160 tg~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~--------  230 (710)
T 2xdw_A          160 GAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPD--------  230 (710)
T ss_dssp             TTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTT--------
T ss_pred             CCCCCcccc-cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCC--------
Confidence            998765322 2233778999999999998887765                999999887532111111000        


Q ss_pred             eeeecceeeeEeeccceEEEeecC-----CccEEEEeccc------cceeeeccccccCCCeeEEEEcCCCCeEEEEecC
Q psy15995        138 LLSLTSIRNILVLSIGFYIASGDI-----SGKVRIWDTVN------KEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEG  206 (683)
Q Consensus       138 ~~~~~~i~~~~~s~~~~~l~~~~~-----d~~i~iwd~~~------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~  206 (683)
                        +...+..+.|+|||++|+..+.     +..|.+||+.+      +... ...+..+...+.. .|+|+|+.+++.+..
T Consensus       231 --~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~-~~~l~~~~~~~~~-~~s~dg~~l~~~s~~  306 (710)
T 2xdw_A          231 --EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK-WVKLIDNFEGEYD-YVTNEGTVFTFKTNR  306 (710)
T ss_dssp             --CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC-CEEEECSSSSCEE-EEEEETTEEEEEECT
T ss_pred             --CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc-eEEeeCCCCcEEE-EEeccCCEEEEEECC
Confidence              0033567899999999988764     56899999986      4211 1122223344443 589999998888764


Q ss_pred             C--ceEEEEEEccCCC--ceeeeecCCc--CeEEEEeecCCCeEEEEeeCCCe--EEEEcCCCCceeeeccccccCeEEE
Q psy15995        207 R--ERFGHVFMSETGT--SVGEISGQSK--PINSCDFKPSRPFRIITGSEDNT--IAVFEGPPFKFKMTKQEHSRFVQAV  278 (683)
Q Consensus       207 ~--~~~~~~~~~~~~~--~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~d~~--i~iw~~~~~~~~~~~~~~~~~v~~~  278 (683)
                      .  ...+.+++.+++.  ....+..|..  .+..+.|++++. ++++...++.  |.+|+..+++....+..+...+..+
T Consensus       307 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~  385 (710)
T 2xdw_A          307 HSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF-LVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGY  385 (710)
T ss_dssp             TCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE-EEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEE
T ss_pred             CCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE-EEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEE
Confidence            3  2335556666554  2355656544  678899986655 5888888885  5566776777777777777888999


Q ss_pred             EECCCCCEEEEEc----CCCcEEEEeCCCCe
Q psy15995        279 RYSPSGSHFASAG----FDGKVFLYDGASAD  305 (683)
Q Consensus       279 ~~~~~~~~l~~~~----~dg~i~iw~~~~~~  305 (683)
                      .++|+++.++...    ..++++.||+.+++
T Consensus       386 ~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          386 SGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             ECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             ecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            9999998666432    24789999998876

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.72  E-value=2.3e-15  Score=141.16  Aligned_cols=249  Identities=12%  Similarity=0.074  Sum_probs=177.1

Q ss_pred             cccccCcccceEEEEECCCCc-EEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEE
Q psy15995         78 SDIYTEHSCAVNVAKYSPSGF-YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYI  156 (683)
Q Consensus        78 ~~~~~~h~~~v~~~~~s~d~~-~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  156 (683)
                      +..+..+.....+++|+|+|+ +++++..++.|..||..++  ...+....              ..+..++++++|+++
T Consensus        20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~--------------~~~~~l~~~~dg~l~   83 (296)
T 3e5z_A           20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPS--------------HHQNGHCLNKQGHLI   83 (296)
T ss_dssp             CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSC--------------SSEEEEEECTTCCEE
T ss_pred             EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCC--------------CCcceeeECCCCcEE
Confidence            344555666788999999998 7788888999999999876  33332221              457889999999988


Q ss_pred             EeecCCccEEEEeccccceeeecccc--ccCCCeeEEEEcCCCCeEEEEecC-------------CceEEEEEEccCCCc
Q psy15995        157 ASGDISGKVRIWDTVNKEHILKNEFH--PIGGPIKDIAWSPDNQRMVVVGEG-------------RERFGHVFMSETGTS  221 (683)
Q Consensus       157 ~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~~-------------~~~~~~~~~~~~~~~  221 (683)
                      ++...++.|.+||..+++........  .....+..++++|+|+.+++....             ......+|.++....
T Consensus        84 v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~  163 (296)
T 3e5z_A           84 ACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT  163 (296)
T ss_dssp             EEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC
T ss_pred             EEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCC
Confidence            88888899999999877643222111  112356789999999877753210             000125666655444


Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC-CCce---eeeccccccCeEEEEECCCCCEEEEEcCCCcEE
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP-PFKF---KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVF  297 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  297 (683)
                      ...+..+......++|+|+++. +++.+.++.|.+|+.. +++.   ...+..+...+..++++++|++.++.  ++.|.
T Consensus       164 ~~~~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~  240 (296)
T 3e5z_A          164 LSAPIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVH  240 (296)
T ss_dssp             EEEEECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEE
T ss_pred             EEEeecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEE
Confidence            5556667778899999999997 4888888999999986 4443   22233355567789999999866655  78999


Q ss_pred             EEeCCCCeeEEeccCCccccCeEEEEE-ccCCCEEEEEECCCcEEEEECCCCce
Q psy15995        298 LYDGASADLVSELGNPAHKGGVYAVAW-KPDGTQLLTASGDKTCKLWDIETKSV  350 (683)
Q Consensus       298 iw~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~  350 (683)
                      +|+.. ++.+..+..  +.. +.+++| .|+++.|++++.++ +..++..+++.
T Consensus       241 ~~~~~-g~~~~~~~~--~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~  289 (296)
T 3e5z_A          241 VLTPD-GDELGRVLT--PQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL  289 (296)
T ss_dssp             EECTT-SCEEEEEEC--SSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred             EECCC-CCEEEEEEC--CCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence            99976 777777654  444 889999 58999899888764 55566666554

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.72  E-value=4e-15  Score=139.61  Aligned_cols=288  Identities=12%  Similarity=0.016  Sum_probs=190.8

Q ss_pred             EeeCCCCCeEEEec------CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEec----------CCCCEEEEe
Q psy15995         50 LGGDPKGKNFLYTN------GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD----------ISGKVRIWD  113 (683)
Q Consensus        50 ~~~s~~~~~l~~~~------~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~----------~dg~i~iwd  113 (683)
                      ....||++.+....      ++.|.+.|..+++.+..+.....+ . +++||||++|+++.          .++.|.+||
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD  115 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD  115 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence            34579999988874      468999999999998888755555 4 99999999887765          357899999


Q ss_pred             CCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC--CccEEEEeccccceeeeccccccC-----C
Q psy15995        114 TVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI--SGKVRIWDTVNKEHILKNEFHPIG-----G  186 (683)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~-----~  186 (683)
                      ..+.+.+.++...... ..      ........++|+|||++|.++..  ++.|.++|+.+++.+.........     +
T Consensus       116 ~~t~~v~~~I~v~~g~-r~------~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g  188 (386)
T 3sjl_D          116 PVTLLPTADIELPDAP-RF------LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTA  188 (386)
T ss_dssp             TTTCCEEEEEEETTCC-CC------CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEE
T ss_pred             CCCCeEEEEEECCCcc-cc------ccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCC
Confidence            9999888776543200 00      00124567899999999888763  689999999999877665543210     0


Q ss_pred             CeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeE-EEEee-cCCCeEEEEeeCCCeEEEEcCCCCce
Q psy15995        187 PIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPIN-SCDFK-PSRPFRIITGSEDNTIAVFEGPPFKF  264 (683)
Q Consensus       187 ~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~-~~~~~~l~~~~~d~~i~iw~~~~~~~  264 (683)
                      .-.-++.++||+++.+.........   ...+    ..+.....++. ...|. ++++  ++..+.+|.+.+.|..+...
T Consensus       189 ~~~~~~~~~DG~~~~v~~~~~g~v~---~~~~----~~~~~~~~~~~~~~~~~~~dG~--~~~vs~~g~V~v~d~~~~~~  259 (386)
T 3sjl_D          189 PDTFFMHCRDGSLAKVAFGTEGTPE---ITHT----EVFHPEDEFLINHPAYSQKAGR--LVWPTYTGKIHQIDLSSGDA  259 (386)
T ss_dssp             TTEEEEEETTSCEEEEECCSSSCCE---EEEC----CCCSCTTSCBCSCCEEETTTTE--EEEEBTTSEEEEEECTTSSC
T ss_pred             CceeEEECCCCCEEEEECCCCCeEE---Eeec----ceeccccccccccceeEcCCCc--EEEEeCCCEEEEEECCCCcc
Confidence            0011255556655554443311111   0000    01111112222 23564 5664  44466689999999866542


Q ss_pred             --eeecc----------ccccCeEEEEECCCCCEEEEEcC----------CCcEEEEeCCCCeeEEeccCCccccCeEEE
Q psy15995        265 --KMTKQ----------EHSRFVQAVRYSPSGSHFASAGF----------DGKVFLYDGASADLVSELGNPAHKGGVYAV  322 (683)
Q Consensus       265 --~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~  322 (683)
                        ...+.          ........++++++++.++....          .+.|.+.|+.+++.+..+..   ...+..+
T Consensus       260 ~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v---g~~~~~l  336 (386)
T 3sjl_D          260 KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM---GHEIDSI  336 (386)
T ss_dssp             EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE---EEEECEE
T ss_pred             eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC---CCCcceE
Confidence              22221          01233445788999998877643          25799999999999999873   3478899


Q ss_pred             EEccCCC-EEEEEE-CCCcEEEEECCCCceeeEEEecC
Q psy15995        323 AWKPDGT-QLLTAS-GDKTCKLWDIETKSVVSEFIMGN  358 (683)
Q Consensus       323 ~~~~~~~-~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~  358 (683)
                      ++++|++ +|++.. .++.|.++|..+++.+.++....
T Consensus       337 avs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~  374 (386)
T 3sjl_D          337 NVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLG  374 (386)
T ss_dssp             EECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCC
T ss_pred             EECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCC
Confidence            9999997 676654 48899999999999988876554

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.71  E-value=3e-14  Score=136.53  Aligned_cols=281  Identities=11%  Similarity=-0.050  Sum_probs=185.1

Q ss_pred             eCCCCCeEEEecC--C----eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEec----------CCCCEEEEeCC
Q psy15995         52 GDPKGKNFLYTNG--N----SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD----------ISGKVRIWDTV  115 (683)
Q Consensus        52 ~s~~~~~l~~~~~--~----~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~----------~dg~i~iwd~~  115 (683)
                      ..|+++++.....  .    .|.++|..+++.+..+.....+  .+++||||++|+.+.          .++.|.+||..
T Consensus        28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~  105 (373)
T 2mad_H           28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV  105 (373)
T ss_pred             CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence            4577776555532  2    8899999999988777755444  999999999998875          36789999999


Q ss_pred             CcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC--CccEEEEeccccceeee-ccccccCCCeeEEE
Q psy15995        116 NKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI--SGKVRIWDTVNKEHILK-NEFHPIGGPIKDIA  192 (683)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--d~~i~iwd~~~~~~~~~-~~~~~~~~~i~~~~  192 (683)
                      +.+.+.++.......       .........++++|||++|+++..  ++.|.++| .+++.+.. ....   +   ++.
T Consensus       106 t~~~~~~i~~~~~~~-------~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~---~---~~~  171 (373)
T 2mad_H          106 TFLPIADIELPDAPR-------FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP---T---CYH  171 (373)
T ss_pred             CCcEEEEEECCCccc-------cccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC---c---eEE
Confidence            887766654321000       000023457899999999998864  57899999 98876544 3332   1   244


Q ss_pred             EcCCCCeEEEEecCCceEEEEEEccCCCceeeee-----cCCcC-eEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce--
Q psy15995        193 WSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS-----GQSKP-INSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF--  264 (683)
Q Consensus       193 ~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--  264 (683)
                      +.|++...++....... ..+++. +++......     ....+ .....+.+++.. ++..+..+.+.+.|......  
T Consensus       172 ~~~~~~~~~~~~~~dg~-~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~v~vid~~~~~~~v  248 (373)
T 2mad_H          172 IHPGAPSTFYLLCAQGG-LAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR-IVWPVYSGKILQADISAAGATN  248 (373)
T ss_pred             EEeCCCceEEEEcCCCC-EEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCE-EEEEcCCceEEEEeccCCcceE
Confidence            55655443333222222 344555 555442221     11122 233556776664 34344678899999865432  


Q ss_pred             eeeccc----------cccCeEEEEECCCCCEEEEEcC----------CCcEEEEeCCCCeeEEeccCCccccCeEEEEE
Q psy15995        265 KMTKQE----------HSRFVQAVRYSPSGSHFASAGF----------DGKVFLYDGASADLVSELGNPAHKGGVYAVAW  324 (683)
Q Consensus       265 ~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~  324 (683)
                      ...+..          .......++++|+++.++++..          .+.|.++|..+++.+..+..   .....+++|
T Consensus       249 ~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~---g~~p~~i~~  325 (373)
T 2mad_H          249 KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL---GHDVDAISV  325 (373)
T ss_pred             eeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC---CCCcCeEEE
Confidence            122110          1223445789999998777643          35799999999999988863   346899999


Q ss_pred             ccCCC-EEEEEE-CCCcEEEEECCCCceeeEE
Q psy15995        325 KPDGT-QLLTAS-GDKTCKLWDIETKSVVSEF  354 (683)
Q Consensus       325 ~~~~~-~l~~~~-~dg~i~iwd~~~~~~~~~~  354 (683)
                      +||++ +++++. .++.|.++|+.+++.+..+
T Consensus       326 s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i  357 (373)
T 2mad_H          326 AQDGGPDLYALSAGTEVLHIYDAGAGDQDQST  357 (373)
T ss_pred             CCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence            99999 777776 4899999999999988773

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.71  E-value=9.6e-14  Score=130.67  Aligned_cols=284  Identities=10%  Similarity=0.041  Sum_probs=191.7

Q ss_pred             ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCc
Q psy15995        270 EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       270 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      .+...+.++++.++|+.+++...++.|..||.. ++... +..+.....+.++++.++++.+++...++.|..|+.. ++
T Consensus        12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~   88 (299)
T 2z2n_A           12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITE-YPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI   88 (299)
T ss_dssp             SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred             CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEE-ecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc
Confidence            345679999999999977777667899999987 55433 2222245679999999999877776667889999986 33


Q ss_pred             eeeEEEec-CcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEE
Q psy15995        350 VVSEFIMG-NQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITR  428 (683)
Q Consensus       350 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~  428 (683)
                       ...+... .......+.+.+++...++...++.+..+|. .+.........+...+..+++.++++..++...++.|..
T Consensus        89 -~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~  166 (299)
T 2z2n_A           89 -IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGR  166 (299)
T ss_dssp             -EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred             -EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEE
Confidence             2333322 2334556666677777777767889999998 322221122234456899999999988877777788999


Q ss_pred             EcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEE
Q psy15995        429 WNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISI  508 (683)
Q Consensus       429 w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (683)
                      ||. +++........                                                                 
T Consensus       167 ~~~-~g~~~~~~~~~-----------------------------------------------------------------  180 (299)
T 2z2n_A          167 ITE-SGDITEFKIPT-----------------------------------------------------------------  180 (299)
T ss_dssp             ECT-TCCEEEEECSS-----------------------------------------------------------------
T ss_pred             EcC-CCcEEEeeCCC-----------------------------------------------------------------
Confidence            987 44332211000                                                                 


Q ss_pred             EeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeE
Q psy15995        509 VENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKV  588 (683)
Q Consensus       509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i  588 (683)
                                 ....+..+++++++++.++...++.|.+|+. ++.............+.+++++++|+++++...++.|
T Consensus       181 -----------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i  248 (299)
T 2z2n_A          181 -----------PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKI  248 (299)
T ss_dssp             -----------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEE
T ss_pred             -----------CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceE
Confidence                       0113467888888887777767788999998 5543321111245678999999999977776678899


Q ss_pred             EEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCC
Q psy15995        589 VLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASP  640 (683)
Q Consensus       589 ~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~  640 (683)
                      ..||. +++... .....+...+.++++ +++++.++.. .+.+..++.++.
T Consensus       249 ~~~d~-~g~~~~-~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~  296 (299)
T 2z2n_A          249 GRLTS-NNIIEE-YPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKD  296 (299)
T ss_dssp             EEEET-TTEEEE-EECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC--
T ss_pred             EEECC-CCceEE-EeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCcc
Confidence            99998 454322 111124467899999 8888777665 566777776654

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.71  E-value=2.1e-14  Score=134.67  Aligned_cols=304  Identities=13%  Similarity=0.045  Sum_probs=202.7

Q ss_pred             EEECCCCCEEEEEcC-----CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEE----------CCCcEEE
Q psy15995        278 VRYSPSGSHFASAGF-----DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS----------GDKTCKL  342 (683)
Q Consensus       278 ~~~~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~i  342 (683)
                      ....|+++.+++...     ++.|.++|..+++.+..+..  ...+  .++++||+++++++.          .++.|.+
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v--G~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~Vsv  113 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG--GFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEV  113 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE--CSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC--CCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence            455789998888765     57999999999999988864  3334  499999999998876          3578999


Q ss_pred             EECCCCceeeEEEecC------cceeceEEEEecCCEEEEEec--CCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC
Q psy15995        343 WDIETKSVVSEFIMGN------QVEDQQVSCLWQGDYLLTVSL--SGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR  414 (683)
Q Consensus       343 wd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~--~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  414 (683)
                      ||..+++.+.++....      ......+.+++++++++++..  ++.+.++|.... +.+..+....  . ...+....
T Consensus       114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~-~vv~tI~v~g--~-~~~~P~g~  189 (386)
T 3sjl_D          114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK-AFKRMLDVPD--C-YHIFPTAP  189 (386)
T ss_dssp             ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT-EEEEEEECCS--E-EEEEEEET
T ss_pred             EECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC-cEEEEEECCC--c-ceeecCCC
Confidence            9999999999887653      235678899999999998874  689999999884 4444443211  1 12233344


Q ss_pred             CEEEEEeCCCcEEEEcCCC-CCcceecc---CCCCccee-EEEEe--CCeEEEEEcCCeEEEEeCCCCcccCC-ceecCC
Q psy15995        415 GTVFTGSHDGFITRWNAKT-GENDRVQG---AGHGNQIN-GMKAT--GELLYTCGIDDTIKQVDLSSNAYSGP-EVKLGS  486 (683)
Q Consensus       415 ~~l~~~~~dg~i~~w~~~~-~~~~~~~~---~~~~~~v~-~~~~~--~~~l~~~~~d~~i~~~~~~~~~~~~~-~~~~~~  486 (683)
                      +.+++.+.||.+.+.++.+ ++......   ......+. ...+.  ...++..+.++.+.+.|+.+...... ...+..
T Consensus       190 ~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~  269 (386)
T 3sjl_D          190 DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALT  269 (386)
T ss_dssp             TEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSC
T ss_pred             ceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccc
Confidence            5666777788888888765 44321110   01111221 12332  34454566789999999876532110 000000


Q ss_pred             CCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcC----------CCcEEEEEcCCCccC
Q psy15995        487 QPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGA----------DSKVHIYELNNKSLS  556 (683)
Q Consensus       487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~  556 (683)
                       ..                        ....--.......++++++++.+++...          .+.|.++|+.+.+.+
T Consensus       270 -~~------------------------~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~  324 (386)
T 3sjl_D          270 -EA------------------------ERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL  324 (386)
T ss_dssp             -HH------------------------HHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE
T ss_pred             -cc------------------------cccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEE
Confidence             00                        0000000123445788999998888643          256999999999988


Q ss_pred             cceeecCCcCeeEEEECCCCC-EEEEEe-CCCeEEEEECCCCccccccceeeecccEEEEEecCC
Q psy15995        557 PKAELDHLGPVTDCSFSPSNE-YLVASD-AHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPD  619 (683)
Q Consensus       557 ~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d  619 (683)
                      .....+  ..+..+++++|++ +|+++. .++.|.++|..+++.+......   +..+.|.+++|
T Consensus       325 ~~i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~---~~p~~l~~s~d  384 (386)
T 3sjl_D          325 AKFEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL---GHGPQVITTAD  384 (386)
T ss_dssp             EEEEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC---CSSCCEEEECC
T ss_pred             EEEECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC---CCCceeEECCc
Confidence            777655  4688999999997 666654 5899999999999988776654   33455677776

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.70  E-value=1.7e-13  Score=129.03  Aligned_cols=279  Identities=10%  Similarity=-0.018  Sum_probs=190.5

Q ss_pred             CCeEEEeeCCCCCeEEEec-CCeEEEEeCCCCccccc-ccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccc
Q psy15995         45 GQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDI-YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILK  122 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~-~~~i~v~~~~~~~~~~~-~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~  122 (683)
                      ..+..++++|+|+++++.. ++.|.+||.. ++.... +..+...+.+++++++|+++++...++.|..||.. ++ ...
T Consensus        15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~   91 (299)
T 2z2n_A           15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI-IKE   91 (299)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEE
T ss_pred             CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-EEE
Confidence            5788999999999888775 6899999988 554332 23356789999999999988887778889999976 32 112


Q ss_pred             cccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEE
Q psy15995        123 NEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVV  202 (683)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  202 (683)
                      +....            ....+..+++.++|..+++...++.|..||. +++.. ..........+..+++.++++..++
T Consensus        92 ~~~~~------------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~  157 (299)
T 2z2n_A           92 YTLPN------------PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR-EYELPNKGSYPSFITLGSDNALWFT  157 (299)
T ss_dssp             EECSS------------TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSCEEEE
T ss_pred             EeCCC------------cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE-EecCCCCCCCCceEEEcCCCCEEEE
Confidence            21110            1145778999999988888877889999998 54432 2222223457899999999976554


Q ss_pred             EecCCceEEEEEEccCCCceee-eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeee-ccccccCeEEEEE
Q psy15995        203 VGEGRERFGHVFMSETGTSVGE-ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT-KQEHSRFVQAVRY  280 (683)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~  280 (683)
                      .....  .+..++. +++.... +..+...+..+++.+++.. .++...++.|.+|+. +++.... ...+...+.++++
T Consensus       158 ~~~~~--~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l-~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~  232 (299)
T 2z2n_A          158 ENQNN--AIGRITE-SGDITEFKIPTPASGPVGITKGNDDAL-WFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITA  232 (299)
T ss_dssp             ETTTT--EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSE-EEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE
T ss_pred             eCCCC--EEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCE-EEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEE
Confidence            43322  1444554 4443322 2334567889999999873 666566789999998 6654332 3334567899999


Q ss_pred             CCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCc
Q psy15995        281 SPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       281 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      +++|+..++...++.|..||. +++. ..+..+.+...+.++++ ++++..++.. .+.+..++..+++
T Consensus       233 ~~~g~l~v~~~~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~  297 (299)
T 2z2n_A          233 GAGIDLWFTEWGANKIGRLTS-NNII-EEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN  297 (299)
T ss_dssp             CSTTCEEEEETTTTEEEEEET-TTEE-EEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred             CCCCCEEEeccCCceEEEECC-CCce-EEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence            999997776667789999998 4543 33322335567899999 8887666544 5677777776543

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.70  E-value=9.2e-15  Score=139.90  Aligned_cols=286  Identities=13%  Similarity=0.119  Sum_probs=187.7

Q ss_pred             cCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEe
Q psy15995        230 KPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSE  309 (683)
Q Consensus       230 ~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~  309 (683)
                      ..|.++.|++++.. ++..+.++.++.|   ..+....+..+...+.+++|++++++++++..++.|.+||..+++....
T Consensus         6 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~   81 (333)
T 2dg1_A            6 QDLPTLFYSGKSNS-AVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRP   81 (333)
T ss_dssp             CCCCBCCSCGGGGC-SSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEE
T ss_pred             cccceeeecCCccc-eeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEE
Confidence            34677888988774 6666778888888   3445555666777789999999999888888899999999988876654


Q ss_pred             ccCCccccCeEEEEEccCCCEEEEEECC----CcEEEEECCCCceeeEEEe-cCcceeceEEEEecCCEEEEEec-----
Q psy15995        310 LGNPAHKGGVYAVAWKPDGTQLLTASGD----KTCKLWDIETKSVVSEFIM-GNQVEDQQVSCLWQGDYLLTVSL-----  379 (683)
Q Consensus       310 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-----  379 (683)
                      ...  +...+.+++++|+++++++...+    +.|.+||..++.....+.. ........+.+.++++.+++...     
T Consensus        82 ~~~--~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~  159 (333)
T 2dg1_A           82 FVS--HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTN  159 (333)
T ss_dssp             EEC--SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTB
T ss_pred             eeC--CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccC
Confidence            422  55789999999999877776665    6899999987765433221 12234556677778876665543     


Q ss_pred             -CCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEE-EEeCCCcEEEEcCCC-CCcceeccCCCCcceeEEEEeCC
Q psy15995        380 -SGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVF-TGSHDGFITRWNAKT-GENDRVQGAGHGNQINGMKATGE  456 (683)
Q Consensus       380 -~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~w~~~~-~~~~~~~~~~~~~~v~~~~~~~~  456 (683)
                       .+.+..++...  .....+..+...+..++|+|+++.++ +.+.++.|.+|++.+ +........    .         
T Consensus       160 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~----~---------  224 (333)
T 2dg1_A          160 PLGGVYYVSPDF--RTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGA----T---------  224 (333)
T ss_dssp             CCEEEEEECTTS--CCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEE----E---------
T ss_pred             CCceEEEEeCCC--CEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccc----e---------
Confidence             24555565543  22233333445678999999998665 445678899998753 221111000    0         


Q ss_pred             eEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEE
Q psy15995        457 LLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLV  536 (683)
Q Consensus       457 ~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  536 (683)
                                + ....                                              .....+..++++++++++
T Consensus       225 ----------~-~~~~----------------------------------------------~~~~~~~~i~~d~~G~l~  247 (333)
T 2dg1_A          225 ----------I-PYYF----------------------------------------------TGHEGPDSCCIDSDDNLY  247 (333)
T ss_dssp             ----------E-EEEC----------------------------------------------CSSSEEEEEEEBTTCCEE
T ss_pred             ----------E-EEec----------------------------------------------CCCCCCCceEECCCCCEE
Confidence                      0 0000                                              000134668899999988


Q ss_pred             EEEcCCCcEEEEEcCCCccCcceeecC-----CcCeeEEEECCCCCEEEEEeCCC------eEEEEECC
Q psy15995        537 AVGGADSKVHIYELNNKSLSPKAELDH-----LGPVTDCSFSPSNEYLVASDAHR------KVVLYRVP  594 (683)
Q Consensus       537 ~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~d~------~i~i~~~~  594 (683)
                      ++...++.|.+||.+ ++.........     ...+.+++|+||++.|+.++.++      .|..++..
T Consensus       248 v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~  315 (333)
T 2dg1_A          248 VAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF  315 (333)
T ss_dssp             EEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred             EEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence            887778899999985 43332332221     12689999999988877666553      45555544

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=99.70  E-value=1.1e-10  Score=125.20  Aligned_cols=538  Identities=11%  Similarity=0.027  Sum_probs=313.8

Q ss_pred             CCCeEEEeeCCCCC-eEEEecCCeEEEEeCCCCcccccc-c---C---cccceEEEEECC--CCcEEEEecCCCCEEEEe
Q psy15995         44 RGQPIVLGGDPKGK-NFLYTNGNSVIIRNIENPAISDIY-T---E---HSCAVNVAKYSP--SGFYIASGDISGKVRIWD  113 (683)
Q Consensus        44 ~~~~~~~~~s~~~~-~l~~~~~~~i~v~~~~~~~~~~~~-~---~---h~~~v~~~~~s~--d~~~las~~~dg~i~iwd  113 (683)
                      .+.+.++...++|+ +.+.+.++.+..||..+.+..... .   .   ....|.++....  +|+..+ ++.++.|..+|
T Consensus        65 ~n~I~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi-~t~~~gl~~~~  143 (781)
T 3v9f_A           65 GNELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWV-CTYYRGIEYLD  143 (781)
T ss_dssp             CSCEEEEEECSSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEE-EESSSCEEEEE
T ss_pred             ccccceEEEcCCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEE-EECCCCeeEEE
Confidence            35688898899998 655555547999998877643321 1   1   123699999888  776544 55344599999


Q ss_pred             CCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeecccc-----ccCCCe
Q psy15995        114 TVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFH-----PIGGPI  188 (683)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~i  188 (683)
                      ..+++... +......        ......|.++...++|.+.+ ++.++-|..||..+++........     -....|
T Consensus       144 ~~~~~~~~-~~~~~~~--------~l~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i  213 (781)
T 3v9f_A          144 IATGKFTH-YNKSTVP--------ALPSEQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDV  213 (781)
T ss_dssp             TTTTEEEE-ESTTTCT--------TCSCCCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC--------CCSSE
T ss_pred             CCCCeEEe-eccCccc--------CCCccceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCce
Confidence            87664321 1110000        00113467777777776665 444545888998776432211000     113568


Q ss_pred             eEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeee-------cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC
Q psy15995        189 KDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS-------GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP  261 (683)
Q Consensus       189 ~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~  261 (683)
                      .++...+++...+.. ..+   +..++..+++......       .....|.++...+++.  +..|+..+-+.+++..+
T Consensus       214 ~~i~~d~~g~lwigt-~~G---l~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~--lWigt~~~Gl~~~~~~~  287 (781)
T 3v9f_A          214 RCIYKDTNGNIWIGT-SKG---LALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK--LWIATELNGIMILDLQQ  287 (781)
T ss_dssp             EEEEECTTCCEEEEE-TTE---EEEEETTTTEEEC-----------CCCCEEEEEECTTSE--EEEEESSSCEEEEETTC
T ss_pred             eEEEEcCCCCEEEEe-CCc---HheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC--EEEEeCCCCeEEECCCC
Confidence            899988888766544 321   5566655543322111       1245688998888885  66677756688888766


Q ss_pred             Cceeeecc--------------ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEecc-------CCccccCeE
Q psy15995        262 FKFKMTKQ--------------EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG-------NPAHKGGVY  320 (683)
Q Consensus       262 ~~~~~~~~--------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------~~~~~~~i~  320 (683)
                      .+......              .....|.++...++|. |-.|+.++-|..++..+........       .......|.
T Consensus       288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~  366 (781)
T 3v9f_A          288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVS  366 (781)
T ss_dssp             C---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEE
T ss_pred             CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceE
Confidence            54322111              2345799999999887 5556666779999877654433211       111345689


Q ss_pred             EEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeee
Q psy15995        321 AVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKG  400 (683)
Q Consensus       321 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~  400 (683)
                      ++...+++. |..|+.++-|..++..++.... +..                                   .     ...
T Consensus       367 ~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~-~~~-----------------------------------~-----~~~  404 (781)
T 3v9f_A          367 SVCDDGQGK-LWIGTDGGGINVFENGKRVAIY-NKE-----------------------------------N-----REL  404 (781)
T ss_dssp             EEEECTTSC-EEEEEBSSCEEEEETTEEEEEC-C---------------------------------------------C
T ss_pred             EEEEcCCCC-EEEEeCCCcEEEEECCCCeEEE-ccC-----------------------------------C-----CCC
Confidence            998888776 5566655668888876432211 000                                   0     011


Q ss_pred             ccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceecc-CCCCcceeEEEEe-CCeEEEEEcCCeEEEEeCCCCccc
Q psy15995        401 HNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQG-AGHGNQINGMKAT-GELLYTCGIDDTIKQVDLSSNAYS  478 (683)
Q Consensus       401 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~-~~~~~~v~~~~~~-~~~l~~~~~d~~i~~~~~~~~~~~  478 (683)
                      ....|.++...+++.+.+ |+.++-+..++..+++...... ......|.++..+ ...|..++. +-+..++..+....
T Consensus       405 ~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~  482 (781)
T 3v9f_A          405 LSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVI  482 (781)
T ss_dssp             CCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCC
T ss_pred             CCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEE
Confidence            245688888887776554 6666678899987765433321 1234578888777 567777776 66888887765331


Q ss_pred             CCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcc
Q psy15995        479 GPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPK  558 (683)
Q Consensus       479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~  558 (683)
                      .... ...                          .    ......+.++...+++++.+....+| +..||..+++....
T Consensus       483 ~~~~-~~~--------------------------~----~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~~  530 (781)
T 3v9f_A          483 HHYD-TSN--------------------------S----QLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRKF  530 (781)
T ss_dssp             EEEC-TTT--------------------------S----SCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEEE
T ss_pred             eccc-Ccc--------------------------c----ccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEEc
Confidence            1100 000                          0    00123567888888887665543344 77788776644321


Q ss_pred             eee-c-CCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccce-eeecccEEEEEecCCCCeEEEeecCCcEEEE
Q psy15995        559 AEL-D-HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEW-GFHSAKVNCVAWSPDSALVASGSLDTTIIIW  635 (683)
Q Consensus       559 ~~~-~-~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~-~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw  635 (683)
                      ... + ....|.++...++|.+.++.. +|-+..||..+++....... +.....|.++...++|++.+++ .+| |..+
T Consensus       531 ~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~G-l~~~  607 (781)
T 3v9f_A          531 NQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST-NTG-ISCY  607 (781)
T ss_dssp             CTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC-SSC-EEEE
T ss_pred             cCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc-CCc-eEEE
Confidence            110 0 245689999999998776655 66558888877654322111 1123468889999888876654 455 8888


Q ss_pred             eCCCCceeeEeec-CCCCCC--eeEEEEccCCeEEEeeCCCcEEEEe
Q psy15995        636 SLASPAKHIIIKN-AHPQSQ--ITRLQWLDNDLLVSVGQDCNTKIWE  679 (683)
Q Consensus       636 ~~~~~~~~~~~~~-~~~~~~--v~~l~~~~~~~l~s~~~d~~v~vw~  679 (683)
                      +..+.+...--.. +-....  ..++....++.|..++.+|- ..++
T Consensus       608 ~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~Gl-~~f~  653 (781)
T 3v9f_A          608 ITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSINGL-CFFN  653 (781)
T ss_dssp             ETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEEEETTEE-EEEC
T ss_pred             ECCCCceEEecccCCccccccccCceEECCCCEEEEECCCce-EEEC
Confidence            8776543322111 111122  23444445566777788884 4444

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.70  E-value=6.8e-15  Score=141.84  Aligned_cols=260  Identities=12%  Similarity=0.032  Sum_probs=170.1

Q ss_pred             cceeeeEeeccceEEEeec---------CCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCC---ce
Q psy15995        142 TSIRNILVLSIGFYIASGD---------ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR---ER  209 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~---~~  209 (683)
                      ..+....+  ||++++...         .++.|.+||+.+++....       ..+..++|+|||+.|+.+....   ..
T Consensus        15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-------~~~~~~~~SpDg~~la~~~~~~~~~~~   85 (347)
T 2gop_A           15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-------ENATMPRISPDGKKIAFMRANEEKKVS   85 (347)
T ss_dssp             CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-------ESCEEEEECTTSSEEEEEEEETTTTEE
T ss_pred             EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-------ccCCCeEECCCCCEEEEEEeccCCCcc
Confidence            44566667  888877642         267899999998764322       4678899999999999887542   33


Q ss_pred             EEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeC---------------------------CCeEEEEcCCCC
Q psy15995        210 FGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSE---------------------------DNTIAVFEGPPF  262 (683)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---------------------------d~~i~iw~~~~~  262 (683)
                      .+.+++.+.++....... .. +..+.|+|+++. |+.++.                           ...|.+||+.++
T Consensus        86 ~l~~~~~~~g~~~~l~~~-~~-~~~~~wspdg~~-l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~  162 (347)
T 2gop_A           86 EIWVADLETLSSKKILEA-KN-IRSLEWNEDSRK-LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE  162 (347)
T ss_dssp             EEEEEETTTTEEEEEEEE-SE-EEEEEECTTSSE-EEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred             eEEEEECCCCceEEEEcC-CC-ccceeECCCCCE-EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence            345555555554443333 34 999999999996 555442                           257899999888


Q ss_pred             ceeeeccccccCeEEEEECCCCCEEEEEcCCC-------cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEE
Q psy15995        263 KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDG-------KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS  335 (683)
Q Consensus       263 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  335 (683)
                      +....+.. . .+..++|+|+| .++++..++       ...+|.+.+++... +..  + ..+..+  +|||+.|+..+
T Consensus       163 ~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-l~~--~-~~~~~~--spdg~~l~~~~  233 (347)
T 2gop_A          163 EVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEK-MFE--K-VSFYAV--DSDGERILLYG  233 (347)
T ss_dssp             EEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEE-EEE--E-ESEEEE--EECSSCEEEEE
T ss_pred             eEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEE-ecc--C-cceeeE--CCCCCEEEEEE
Confidence            76344444 3 78899999999 777775542       33444333555433 322  3 445544  99999998877


Q ss_pred             CC--------CcEEEEECCCCceeeEEEecCcceece-EEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEE
Q psy15995        336 GD--------KTCKLWDIETKSVVSEFIMGNQVEDQQ-VSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPIT  406 (683)
Q Consensus       336 ~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~  406 (683)
                      .+        ..|.+||  +++. ..+.......... ..++ ++ .++++..++.+++| +.. ... ..+..+...|.
T Consensus       234 ~~~~~~~~~~~~l~~~d--~~~~-~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~-g~~-~~~~~~~~~v~  305 (347)
T 2gop_A          234 KPEKKYMSEHNKLYIYD--GKEV-MGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD-GEI-KPIAKGRHWIM  305 (347)
T ss_dssp             CCSSSCCCSSCEEEEEC--SSCE-EESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES-SSE-EEEECSSSEEE
T ss_pred             ccccCCccccceEEEEC--CCce-EeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC-Cce-EEEecCCCeEE
Confidence            54        3577777  4443 2222222223332 5555 66 88888999999999 873 333 34444577899


Q ss_pred             EEEEeCCCCEEEEEeCCCcE-EEEcCC
Q psy15995        407 ALALSPDRGTVFTGSHDGFI-TRWNAK  432 (683)
Q Consensus       407 ~~~~~~~~~~l~~~~~dg~i-~~w~~~  432 (683)
                      +++|+|  ..+++++.++.. .+|.+.
T Consensus       306 ~~~~s~--~~~~~~~~~~~~~~l~~~~  330 (347)
T 2gop_A          306 GFDVDE--IVVYLKETATRLRELFTWD  330 (347)
T ss_dssp             EEEESS--SEEEEEECSSSCCEEEEES
T ss_pred             eeeeeC--cEEEEEcCCCChHHheEeC
Confidence            999999  677777766654 666655

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.70  E-value=8e-15  Score=137.50  Aligned_cols=245  Identities=10%  Similarity=0.031  Sum_probs=163.1

Q ss_pred             eeccccccCeEEEEECCCCC-EEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEE
Q psy15995        266 MTKQEHSRFVQAVRYSPSGS-HFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWD  344 (683)
Q Consensus       266 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd  344 (683)
                      ..+..+.....+++|+|+++ .++++..++.|..|+..++  ...+..  +...+.+++++|+++++++...++.|.+||
T Consensus        21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~--~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d   96 (296)
T 3e5z_A           21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMH--PSHHQNGHCLNKQGHLIACSHGLRRLERQR   96 (296)
T ss_dssp             EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEES--SCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred             EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEEC--CCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence            34444556788999999998 7788888999999998877  444443  567799999999999877766678899999


Q ss_pred             CCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCC-
Q psy15995        345 IETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHD-  423 (683)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-  423 (683)
                      ..+++........                                        .......+..++++|+|+++++.+.. 
T Consensus        97 ~~~g~~~~~~~~~----------------------------------------~~~~~~~~~~i~~d~~G~l~vtd~~~g  136 (296)
T 3e5z_A           97 EPGGEWESIADSF----------------------------------------EGKKLNSPNDVCLAPDGSLWFSDPTYG  136 (296)
T ss_dssp             STTCCEEEEECEE----------------------------------------TTEECCCCCCEEECTTSCEEEEECSHH
T ss_pred             CCCCcEEEEeecc----------------------------------------CCCCCCCCCCEEECCCCCEEEECCccc
Confidence            9777643211000                                        00112345678899999888874321 


Q ss_pred             ----------------CcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCC
Q psy15995        424 ----------------GFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQ  487 (683)
Q Consensus       424 ----------------g~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~  487 (683)
                                      +.|..++.. ++.                               ...                 
T Consensus       137 ~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-------------------------------~~~-----------------  167 (296)
T 3e5z_A          137 IDKPEEGYGGEMELPGRWVFRLAPD-GTL-------------------------------SAP-----------------  167 (296)
T ss_dssp             HHCGGGSSCCCCCSSSCEEEEECTT-SCE-------------------------------EEE-----------------
T ss_pred             cccccccccccccCCCcEEEEECCC-CCE-------------------------------EEe-----------------
Confidence                            122222221 110                               000                 


Q ss_pred             CceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcC-CCcc---CcceeecC
Q psy15995        488 PRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELN-NKSL---SPKAELDH  563 (683)
Q Consensus       488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~  563 (683)
                                                    ......+..++++|+++++++.+.++.|.+|++. ++.+   .... ..+
T Consensus       168 ------------------------------~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~  216 (296)
T 3e5z_A          168 ------------------------------IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVE  216 (296)
T ss_dssp             ------------------------------ECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCS
T ss_pred             ------------------------------ecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCC
Confidence                                          0011234678999999998777778999999997 4443   1112 224


Q ss_pred             CcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEe-cCCCCeEEEeecCCcEEEEeCCCCc
Q psy15995        564 LGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAW-SPDSALVASGSLDTTIIIWSLASPA  641 (683)
Q Consensus       564 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~-s~d~~~l~~~~~d~~v~iw~~~~~~  641 (683)
                      ...+..++++++|+++++.  ++.|.+|+.. ++.......  +.. +++++| +|+++.|++++.++ +.-++..+.+
T Consensus       217 ~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~--~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~  288 (296)
T 3e5z_A          217 PGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLT--PQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG  288 (296)
T ss_dssp             SSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEEC--SSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred             CCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEEC--CCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence            4567789999999877766  7889999986 554433322  555 899999 68999898888764 4444554433

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.69  E-value=1.1e-13  Score=132.60  Aligned_cols=281  Identities=13%  Similarity=0.090  Sum_probs=190.0

Q ss_pred             EECCCCcEEEEecC--CC---CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec------
Q psy15995         92 KYSPSGFYIASGDI--SG---KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD------  160 (683)
Q Consensus        92 ~~s~d~~~las~~~--dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~------  160 (683)
                      ...|+++++.+...  ..   +|.++|..+++.+.++...               ... .++++|||++|+++.      
T Consensus        27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g---------------~~p-~i~~spDg~~lyv~n~~~~~~   90 (373)
T 2mad_H           27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG---------------FLP-NPVAAHSGSEFALASTSFSRI   90 (373)
T ss_pred             cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCC---------------CCC-CeEECCCCCEEEEEecccccc
Confidence            44578888877653  33   7899999998876554432               223 899999999998875      


Q ss_pred             ----CCccEEEEeccccceeeecccccc-----CCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceee-eecCCc
Q psy15995        161 ----ISGKVRIWDTVNKEHILKNEFHPI-----GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGE-ISGQSK  230 (683)
Q Consensus       161 ----~d~~i~iwd~~~~~~~~~~~~~~~-----~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  230 (683)
                          .++.|.+||..+.+.+........     ......++|+|||++|+++.......+.+++ ++++.+.. +.... 
T Consensus        91 ~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-  168 (373)
T 2mad_H           91 AKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-  168 (373)
T ss_pred             ccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-
Confidence                367899999998776654443200     1235689999999999998754333477888 88887766 54322 


Q ss_pred             CeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc-----ccccC-eEEEEECCCCCEEEEEcCCCcEEEEeCCCC
Q psy15995        231 PINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ-----EHSRF-VQAVRYSPSGSHFASAGFDGKVFLYDGASA  304 (683)
Q Consensus       231 ~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-----~~~~~-v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  304 (683)
                         ++.+.|+++..+++.+.||.+.+++. +++......     ....+ .....+.+++..++..+..+.+.+.|+.++
T Consensus       169 ---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~  244 (373)
T 2mad_H          169 ---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAA  244 (373)
T ss_pred             ---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCC
Confidence               25566777666788889999999999 777653221     11112 123456676665555557889999998765


Q ss_pred             e--eEEeccCCc--------cccCeEEEEEccCCCEEEEEEC----------CCcEEEEECCCCceeeEEEecCcceece
Q psy15995        305 D--LVSELGNPA--------HKGGVYAVAWKPDGTQLLTASG----------DKTCKLWDIETKSVVSEFIMGNQVEDQQ  364 (683)
Q Consensus       305 ~--~~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~  364 (683)
                      .  .+..+....        .......++++|+++.+++...          .+.|.++|+.+++.+.++..        
T Consensus       245 ~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~--------  316 (373)
T 2mad_H          245 GATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL--------  316 (373)
T ss_pred             cceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC--------
Confidence            3  222221100        1223445778888888777653          24688888877776655421        


Q ss_pred             EEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCC-EEEEEe-CCCcEEEEcCCCCCccee
Q psy15995        365 VSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRG-TVFTGS-HDGFITRWNAKTGENDRV  439 (683)
Q Consensus       365 ~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~~w~~~~~~~~~~  439 (683)
                                                           .....+++|+|||+ .++++. .++.|.++|+.+++....
T Consensus       317 -------------------------------------g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~  356 (373)
T 2mad_H          317 -------------------------------------GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS  356 (373)
T ss_pred             -------------------------------------CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence                                                 22467899999999 777776 489999999999888766

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.68  E-value=7.5e-15  Score=156.17  Aligned_cols=278  Identities=13%  Similarity=0.073  Sum_probs=181.1

Q ss_pred             eCCCCCeEEEec--C----CeEEEEeCC---CCccccc------ccCcccceEEEEECCCCcEEEEecCC-----CCEEE
Q psy15995         52 GDPKGKNFLYTN--G----NSVIIRNIE---NPAISDI------YTEHSCAVNVAKYSPSGFYIASGDIS-----GKVRI  111 (683)
Q Consensus        52 ~s~~~~~l~~~~--~----~~i~v~~~~---~~~~~~~------~~~h~~~v~~~~~s~d~~~las~~~d-----g~i~i  111 (683)
                      .+|||+++++..  +    ..+.+.+..   +++....      -.+|...+..++|||||++||.++.+     .+|++
T Consensus       114 p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v  193 (741)
T 1yr2_A          114 PQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKF  193 (741)
T ss_dssp             CEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEE
T ss_pred             CEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEE
Confidence            469999999873  2    244555554   4433221      12455689999999999999876543     35999


Q ss_pred             EeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCcc--------------EEEEeccccce--
Q psy15995        112 WDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGK--------------VRIWDTVNKEH--  175 (683)
Q Consensus       112 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~--------------i~iwd~~~~~~--  175 (683)
                      ||+.+++.+.. ...              ...+..++|+|| +.|+.++.++.              |++|++.++..  
T Consensus       194 ~dl~tg~~~~~-~~~--------------~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~  257 (741)
T 1yr2_A          194 VGVADGKPLAD-ELK--------------WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD  257 (741)
T ss_dssp             EETTTCCEEEE-EEE--------------EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC
T ss_pred             EECCCCCCCCc-cCC--------------CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC
Confidence            99999876432 111              022357899999 88888776554              88999977652  


Q ss_pred             eeeccccccCCCeeEEEEcCCCCeEEEEecCC---ceEEEEEEccCC--CceeeeecCCcCeEEEEeecCCCeEEEEeeC
Q psy15995        176 ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR---ERFGHVFMSETG--TSVGEISGQSKPINSCDFKPSRPFRIITGSE  250 (683)
Q Consensus       176 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  250 (683)
                      ........+...+..+.|+|||++|+....+.   ...+.+++.+++  +....+..+...+.... +|+++. |+..+.
T Consensus       258 ~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~-l~~~s~  335 (741)
T 1yr2_A          258 QPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQ-LWFVSG  335 (741)
T ss_dssp             EEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTE-EEEEEC
T ss_pred             EEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCE-EEEEEC
Confidence            12222222234588999999999999887543   334667777666  31556666665555554 488876 544443


Q ss_pred             ----CCeEEEEcCCCC--ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCC-CCeeEEeccCCccccCeEEEE
Q psy15995        251 ----DNTIAVFEGPPF--KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGA-SADLVSELGNPAHKGGVYAVA  323 (683)
Q Consensus       251 ----d~~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~~~~~~i~~~~  323 (683)
                          ++.|.+||+.++  +....+..+...+..+.++ ++.++++...++..++|... ++.....+..+ ..+.+..+.
T Consensus       336 ~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~-~~~~v~~~~  413 (741)
T 1yr2_A          336 DGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLP-GIGSASGLS  413 (741)
T ss_dssp             TTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCS-SSCEEEEEE
T ss_pred             CCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCC-CCeEEEEee
Confidence                456999998774  3444444555556677777 55677888888877776543 45555555431 356788999


Q ss_pred             EccCCCEEEEEE----CCCcEEEEECCCCc
Q psy15995        324 WKPDGTQLLTAS----GDKTCKLWDIETKS  349 (683)
Q Consensus       324 ~~~~~~~l~~~~----~dg~i~iwd~~~~~  349 (683)
                      ++|+++.++...    ..+++.+||+.+++
T Consensus       414 ~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          414 GRPGDRHAYLSFSSFTQPATVLALDPATAK  443 (741)
T ss_dssp             CCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred             cCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            999988666432    24679999998876

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.67  E-value=4.4e-14  Score=130.65  Aligned_cols=241  Identities=9%  Similarity=-0.033  Sum_probs=164.9

Q ss_pred             CeEEEeeCCCCCeEE-E-ecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccc
Q psy15995         46 QPIVLGGDPKGKNFL-Y-TNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKN  123 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~-~-~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~  123 (683)
                      .+..++++|+|++++ + ..++.|.+||..+.........+...+.+++++++|+++++.. ++.|.+||..+.... .+
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~  102 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VL  102 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-EC
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-ee
Confidence            778899999999776 4 3568999999877654433334446788999999999777666 889999998765322 11


Q ss_pred             ccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEE
Q psy15995        124 EFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV  203 (683)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  203 (683)
                      ...             ....+..+++.++|+.+++...++.|.+|+..+.....  ........+..++++++++..++.
T Consensus       103 ~~~-------------~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~--~~~~~~~~p~~i~~~~~g~l~v~~  167 (270)
T 1rwi_B          103 PFD-------------GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV--LPFTGLNDPDGVAVDNSGNVYVTD  167 (270)
T ss_dssp             CCC-------------SCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE--CCCCSCCSCCCEEECTTCCEEEEE
T ss_pred             ecC-------------CcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe--eccccCCCceeEEEeCCCCEEEEE
Confidence            111             11456789999999988887778899999866543321  111222467899999999844443


Q ss_pred             ecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCC
Q psy15995        204 GEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPS  283 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~  283 (683)
                      ..+.  .+.+++.+.+........+...+..+++++++. ++++...++.|.+|+............+...+.+++++++
T Consensus       168 ~~~~--~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~  244 (270)
T 1rwi_B          168 TDNN--RVVKLEAESNNQVVLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSD  244 (270)
T ss_dssp             GGGT--EEEEECTTTCCEEECCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTT
T ss_pred             CCCC--EEEEEecCCCceEeecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCC
Confidence            3222  256666655544333334446789999999995 4666667889999998765544333334467899999999


Q ss_pred             CCEEEEEcCCCcEEEEeCCCCee
Q psy15995        284 GSHFASAGFDGKVFLYDGASADL  306 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~~~~~~  306 (683)
                      |+.+++...++.|++++....+.
T Consensus       245 g~l~v~~~~~~~v~~~~~~~~~~  267 (270)
T 1rwi_B          245 RTVYVADRGNDRVVKLTSLEHHH  267 (270)
T ss_dssp             CCEEEEEGGGTEEEEECCCGGGS
T ss_pred             CCEEEEECCCCEEEEEcCCCccc
Confidence            99888888899999999876543

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.67  E-value=8.6e-15  Score=140.25  Aligned_cols=277  Identities=11%  Similarity=0.013  Sum_probs=186.7

Q ss_pred             CCCCCeEEEecC------CeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEec----------CCCCEEEEeCCC
Q psy15995         53 DPKGKNFLYTNG------NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD----------ISGKVRIWDTVN  116 (683)
Q Consensus        53 s~~~~~l~~~~~------~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~----------~dg~i~iwd~~~  116 (683)
                      .|+++++...+.      +.|.++|..+++.+.++.--..+  .+++||||++|+++.          .++.|.++|..+
T Consensus        81 ~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t  158 (426)
T 3c75_H           81 APDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT  158 (426)
T ss_dssp             CCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred             CCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence            467777666543      69999999999998888755555  899999999888765          367899999999


Q ss_pred             cccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC--CccEEEEeccccceeeecccccc-----CCCee
Q psy15995        117 KEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI--SGKVRIWDTVNKEHILKNEFHPI-----GGPIK  189 (683)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~-----~~~i~  189 (683)
                      .+.+.++........       ........++++|||++|+++..  ++.|.+.|+.+++.+........     .+.-.
T Consensus       159 ~~vv~~I~v~g~~r~-------~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~  231 (426)
T 3c75_H          159 FLPIADIELPDAPRF-------LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTV  231 (426)
T ss_dssp             CCEEEEEEETTCCCC-------CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTE
T ss_pred             CcEEEEEECCCcccc-------ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcE
Confidence            988777654310000       00023567899999999998764  57899999999887665554321     00111


Q ss_pred             EEEEcCCCCeEEEEecCCceEEEEEEccCCCcee----eeecCCcCe-EEEEeecCCCeEEEEeeCCCeEEEEcCCCCce
Q psy15995        190 DIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVG----EISGQSKPI-NSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF  264 (683)
Q Consensus       190 ~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v-~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  264 (683)
                      .+++++||+.+++..            ..++...    .+.....++ ..+.|.+++.. ++..+..+.+.+.|......
T Consensus       232 ~v~~~~dG~~~~V~~------------~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~-~~~~s~~g~V~ViD~~~~~~  298 (426)
T 3c75_H          232 FYMNCRDGSLARVDF------------ADGETKVTNTEVFHTEDELLINHPAFSLRSGR-LVWPTYTGKIFQADLTAEGA  298 (426)
T ss_dssp             EEEEETTSSEEEEEC------------CTTCCEEEECCCCSCTTSCBCSCCEECTTTCE-EEEEBTTSEEEEEEECSSCE
T ss_pred             EEEEcCCCCEEEEEC------------CCCcEEEEeeeeeccCCCceeeEeeecCCCCE-EEEEeCCCcEEEEeccCCce
Confidence            244555555444433            2222221    111111221 23567888875 55556678999999765432


Q ss_pred             ee--ecc----------ccccCeEEEEECCCCCEEEEEcC----------CCcEEEEeCCCCeeEEeccCCccccCeEEE
Q psy15995        265 KM--TKQ----------EHSRFVQAVRYSPSGSHFASAGF----------DGKVFLYDGASADLVSELGNPAHKGGVYAV  322 (683)
Q Consensus       265 ~~--~~~----------~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~  322 (683)
                      ..  .+.          ........++++|+++.+++...          ++.|.++|..+.+.+..+..   ......+
T Consensus       299 ~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v---g~~P~gi  375 (426)
T 3c75_H          299 TFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL---GHEIDSI  375 (426)
T ss_dssp             EECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE---EEEECEE
T ss_pred             EEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC---CCCcCeE
Confidence            21  100          01122223689999987777642          35799999999999999863   3358899


Q ss_pred             EEccCCC-EEEEEE-CCCcEEEEECCCCceeeEE
Q psy15995        323 AWKPDGT-QLLTAS-GDKTCKLWDIETKSVVSEF  354 (683)
Q Consensus       323 ~~~~~~~-~l~~~~-~dg~i~iwd~~~~~~~~~~  354 (683)
                      +|+||++ ++++.. .++.|.++|+.+++.+.++
T Consensus       376 a~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI  409 (426)
T 3c75_H          376 NVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV  409 (426)
T ss_dssp             EECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             EEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence            9999999 888888 5899999999999998876

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.66  E-value=9.5e-14  Score=127.17  Aligned_cols=238  Identities=10%  Similarity=0.048  Sum_probs=175.6

Q ss_pred             CCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccc
Q psy15995         95 PSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKE  174 (683)
Q Consensus        95 ~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~  174 (683)
                      ..+++|++++.++.|.+||.++++.+.++..+..             ..+..+.++|+|++|++  .++.|..||. +++
T Consensus         3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~-------------~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~   66 (276)
T 3no2_A            3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKG-------------WECNSVAATKAGEILFS--YSKGAKMITR-DGR   66 (276)
T ss_dssp             CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTT-------------CCCCEEEECTTSCEEEE--CBSEEEEECT-TSC
T ss_pred             CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCcc-------------CCCcCeEECCCCCEEEe--CCCCEEEECC-CCC
Confidence            3467999999999999999999998888765421             24678889999998883  4778999999 788


Q ss_pred             eeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEc-cCCCceeeeec------CCcCeEEEEeecCCCeEEEE
Q psy15995        175 HILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMS-ETGTSVGEISG------QSKPINSCDFKPSRPFRIIT  247 (683)
Q Consensus       175 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~  247 (683)
                      .+...... ....+.++.+.|+|+.+++.+.+.   ..++.+ ..|+.+..+..      +......+++.+++++ +++
T Consensus        67 ~~W~~~~~-~~~~~~~~~~~~dG~~lv~~~~~~---~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~-lv~  141 (276)
T 3no2_A           67 ELWNIAAP-AGCEMQTARILPDGNALVAWCGHP---STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNY-LVP  141 (276)
T ss_dssp             EEEEEECC-TTCEEEEEEECTTSCEEEEEESTT---EEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCE-EEE
T ss_pred             EEEEEcCC-CCccccccEECCCCCEEEEecCCC---CEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCE-EEE
Confidence            77766542 224688999999999999877632   233333 26776666542      2234556788899985 888


Q ss_pred             eeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCc----cccCeEEEE
Q psy15995        248 GSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPA----HKGGVYAVA  323 (683)
Q Consensus       248 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~----~~~~i~~~~  323 (683)
                      ...++.|..||.+ ++.+..+... ..+.++...++|+.++++..++.|..+|..+++.+..+....    .-..+..++
T Consensus       142 ~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~  219 (276)
T 3no2_A          142 LFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLF  219 (276)
T ss_dssp             ETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEE
T ss_pred             ecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccce
Confidence            8899999999987 9988887754 346678889999999988888899999999999988875311    112378888


Q ss_pred             EccCCCEEEEEECC--------CcEEEEEC-CCCceeeEEE
Q psy15995        324 WKPDGTQLLTASGD--------KTCKLWDI-ETKSVVSEFI  355 (683)
Q Consensus       324 ~~~~~~~l~~~~~d--------g~i~iwd~-~~~~~~~~~~  355 (683)
                      ..+++..+++....        +..+++.+ .+++.+.++.
T Consensus       220 ~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~  260 (276)
T 3no2_A          220 PLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLN  260 (276)
T ss_dssp             ECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred             EcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEec
Confidence            99999988776421        13345555 4566655553

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.65  E-value=3.8e-14  Score=129.81  Aligned_cols=247  Identities=11%  Similarity=0.056  Sum_probs=179.8

Q ss_pred             CCCeEEEe-cCCeEEEEeCCCCcccccccCcc-cceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCc
Q psy15995         55 KGKNFLYT-NGNSVIIRNIENPAISDIYTEHS-CAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPI  132 (683)
Q Consensus        55 ~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~-~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  132 (683)
                      .+++|+++ .++.|.+||.++++.+..+..+. ..+.+++++|+|++|++  .++.|..||. +++.+.++.....    
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~----   76 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAPAG----   76 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECCTT----
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCCCC----
Confidence            34566665 57899999999999998888776 57899999999999984  4667999999 7888877765310    


Q ss_pred             ccceeeeeecceeeeEeeccceEEEeecC-CccEEEEeccccceeeeccccc----cCCCeeEEEEcCCCCeEEEEecCC
Q psy15995        133 KDIGTLLSLTSIRNILVLSIGFYIASGDI-SGKVRIWDTVNKEHILKNEFHP----IGGPIKDIAWSPDNQRMVVVGEGR  207 (683)
Q Consensus       133 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~~~~~~~  207 (683)
                               ..+..+.+.++|+++++.+. ++.|..+|. +++.+....+..    .......+++.++|+++++...+.
T Consensus        77 ---------~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~  146 (276)
T 3no2_A           77 ---------CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATS  146 (276)
T ss_dssp             ---------CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTT
T ss_pred             ---------ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCC
Confidence                     24667889999999999877 788888886 566555544321    112455678899999988766543


Q ss_pred             ceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccc------cCeEEEEEC
Q psy15995        208 ERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS------RFVQAVRYS  281 (683)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~------~~v~~~~~~  281 (683)
                        .+..++.+ |+.+.++... ..+..+.+.+++.. ++++..++.|..+|..+++.+..+..+.      ..+..+...
T Consensus       147 --~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~-~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~  221 (276)
T 3no2_A          147 --EVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDC-LVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPL  221 (276)
T ss_dssp             --EEEEECTT-SCEEEEEECS-SCCCEEEECTTSCE-EEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEEC
T ss_pred             --EEEEECCC-CCEEEEEECC-CCccceeEcCCCCE-EEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEc
Confidence              36777777 9988888765 34567788888884 7888888899999999899988875432      237889999


Q ss_pred             CCCCEEEEEcCC--------CcEEEEeC-CCCeeEEeccCCccccCeEEEE
Q psy15995        282 PSGSHFASAGFD--------GKVFLYDG-ASADLVSELGNPAHKGGVYAVA  323 (683)
Q Consensus       282 ~~~~~l~~~~~d--------g~i~iw~~-~~~~~~~~~~~~~~~~~i~~~~  323 (683)
                      ++|+.+++....        +..+++++ .+++.+..+.....-+.+.+++
T Consensus       222 ~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~  272 (276)
T 3no2_A          222 QNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMISTIC  272 (276)
T ss_dssp             TTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCTTTSCCCCEEE
T ss_pred             CCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCcccccceeeee
Confidence            999988776311        12334444 5778777776544455555554

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.65  E-value=9.8e-14  Score=128.26  Aligned_cols=242  Identities=12%  Similarity=0.012  Sum_probs=164.4

Q ss_pred             ceEEEEECCCCcEEE-EecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccE
Q psy15995         87 AVNVAKYSPSGFYIA-SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKV  165 (683)
Q Consensus        87 ~v~~~~~s~d~~~la-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i  165 (683)
                      ...+++++++|++++ +...++.|.+||..+....... ..             ....+..+++.++|+.+++.. ++.|
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~-~~-------------~~~~p~~i~~~~~g~l~v~~~-~~~i   89 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLP-FN-------------GLYQPQGLAVDGAGTVYVTDF-NNRV   89 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECC-CC-------------SCCSCCCEEECTTCCEEEEET-TTEE
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEe-eC-------------CcCCcceeEECCCCCEEEEcC-CCEE
Confidence            678999999999777 5467889999997655322110 00             114567899999998666666 8899


Q ss_pred             EEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEE
Q psy15995        166 RIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRI  245 (683)
Q Consensus       166 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  245 (683)
                      .+||....... .... .....+..++++|+|+..++...+. . +.+++..+.............+..+++++++. ++
T Consensus        90 ~~~d~~~~~~~-~~~~-~~~~~p~~i~~~~~g~l~v~~~~~~-~-i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~  164 (270)
T 1rwi_B           90 VTLAAGSNNQT-VLPF-DGLNYPEGLAVDTQGAVYVADRGNN-R-VVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VY  164 (270)
T ss_dssp             EEECTTCSCCE-ECCC-CSCSSEEEEEECTTCCEEEEEGGGT-E-EEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EE
T ss_pred             EEEeCCCceEe-eeec-CCcCCCcceEECCCCCEEEEECCCC-E-EEEEECCCceeEeeccccCCCceeEEEeCCCC-EE
Confidence            99998765432 1111 1225688999999998544433322 1 34443333222222223345678999999997 46


Q ss_pred             EEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEc
Q psy15995        246 ITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWK  325 (683)
Q Consensus       246 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~  325 (683)
                      ++...++.|.+|+............+...+..++++++|..+++...++.|.+|+...........  .+...+.+++++
T Consensus       165 v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~--~~~~~p~~i~~~  242 (270)
T 1rwi_B          165 VTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPF--TGLNTPLAVAVD  242 (270)
T ss_dssp             EEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCC--CSCSCEEEEEEC
T ss_pred             EEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeecc--CCCCCceeEEEC
Confidence            666678899999987766544433444678999999999877777778899999987654433221  133578999999


Q ss_pred             cCCCEEEEEECCCcEEEEECCCCce
Q psy15995        326 PDGTQLLTASGDKTCKLWDIETKSV  350 (683)
Q Consensus       326 ~~~~~l~~~~~dg~i~iwd~~~~~~  350 (683)
                      ++++.+++...++.|+++++...+.
T Consensus       243 ~~g~l~v~~~~~~~v~~~~~~~~~~  267 (270)
T 1rwi_B          243 SDRTVYVADRGNDRVVKLTSLEHHH  267 (270)
T ss_dssp             TTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred             CCCCEEEEECCCCEEEEEcCCCccc
Confidence            9999888888899999999886654

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.64  E-value=1.4e-13  Score=131.94  Aligned_cols=283  Identities=16%  Similarity=0.137  Sum_probs=185.8

Q ss_pred             cCCCeEEEEeeCC----CeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEc----------CCCcEEEEeCCCC
Q psy15995        239 PSRPFRIITGSED----NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAG----------FDGKVFLYDGASA  304 (683)
Q Consensus       239 ~~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~  304 (683)
                      ++++..+++...+    +.|.++|..+++.+..+..-..+  .++++||+++++++.          .++.|.++|..++
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~  159 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF  159 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence            4555434444433    79999999999999888755555  899999999888776          3678999999999


Q ss_pred             eeEEeccCCc-----cccCeEEEEEccCCCEEEEEEC--CCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEE
Q psy15995        305 DLVSELGNPA-----HKGGVYAVAWKPDGTQLLTASG--DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTV  377 (683)
Q Consensus       305 ~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  377 (683)
                      +.+..+..+.     .......++++||+++++++..  ++.|.+.|+.+++.+.++.....                  
T Consensus       160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~------------------  221 (426)
T 3c75_H          160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC------------------  221 (426)
T ss_dssp             CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE------------------
T ss_pred             cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc------------------
Confidence            9988875320     0134567899999999999874  57899999999988777643210                  


Q ss_pred             ecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCC
Q psy15995        378 SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR-GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGE  456 (683)
Q Consensus       378 ~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~  456 (683)
                                                    ....|++ ..+++.+.||.+.+.+..+++......               
T Consensus       222 ------------------------------~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~---------------  256 (426)
T 3c75_H          222 ------------------------------YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT---------------  256 (426)
T ss_dssp             ------------------------------EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC---------------
T ss_pred             ------------------------------eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee---------------
Confidence                                          0111211 233334444444444442222111000               


Q ss_pred             eEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEE
Q psy15995        457 LLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLV  536 (683)
Q Consensus       457 ~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  536 (683)
                                 .+++.....                                              -...+.+.++++.+
T Consensus       257 -----------~~~~v~~~p----------------------------------------------~~~~~~~~~dg~~~  279 (426)
T 3c75_H          257 -----------EVFHTEDEL----------------------------------------------LINHPAFSLRSGRL  279 (426)
T ss_dssp             -----------CCCSCTTSC----------------------------------------------BCSCCEECTTTCEE
T ss_pred             -----------eeeccCCCc----------------------------------------------eeeEeeecCCCCEE
Confidence                       000100000                                              01123567777776


Q ss_pred             EEEcCCCcEEEEEcCCCccC--cceee------c---CCcCeeEEEECCCCCEEEEEeC----------CCeEEEEECCC
Q psy15995        537 AVGGADSKVHIYELNNKSLS--PKAEL------D---HLGPVTDCSFSPSNEYLVASDA----------HRKVVLYRVPD  595 (683)
Q Consensus       537 ~~~~~dg~i~i~d~~~~~~~--~~~~~------~---~~~~v~~~~~s~~~~~l~~~~~----------d~~i~i~~~~~  595 (683)
                      +.....+.+.+.|..+....  .....      .   .......++++||++++++...          ++.|.++|..+
T Consensus       280 ~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T  359 (426)
T 3c75_H          280 VWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET  359 (426)
T ss_dssp             EEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT
T ss_pred             EEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC
Confidence            66677788888888654321  11110      0   0112224789999998877653          35799999999


Q ss_pred             CccccccceeeecccEEEEEecCCCC-eEEEee-cCCcEEEEeCCCCceeeEe
Q psy15995        596 FELAHNKEWGFHSAKVNCVAWSPDSA-LVASGS-LDTTIIIWSLASPAKHIII  646 (683)
Q Consensus       596 ~~~~~~~~~~~h~~~v~~~~~s~d~~-~l~~~~-~d~~v~iw~~~~~~~~~~~  646 (683)
                      .+.+.....+   .....++|+|||+ +|+++. .++.|.++|+.+.+.+..+
T Consensus       360 ~kvv~~I~vg---~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI  409 (426)
T 3c75_H          360 GERINKIELG---HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV  409 (426)
T ss_dssp             CCEEEEEEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             CeEEEEEECC---CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence            9998777654   3588999999999 888877 5899999999999988876

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=99.64  E-value=1.1e-09  Score=117.38  Aligned_cols=537  Identities=10%  Similarity=0.038  Sum_probs=307.6

Q ss_pred             ccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCcc
Q psy15995         85 SCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGK  164 (683)
Q Consensus        85 ~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~  164 (683)
                      ...|.+|.-.++| +|-.|..+| +..+|-.+-   ..+.. +....  .. .......|.++...++|..|-.++.++-
T Consensus        18 ~n~V~~I~qD~~G-~lWigT~~G-L~ryDG~~f---~~~~~-~~~~~--~~-~~l~~n~I~~i~~d~~g~~lWigt~~~G   88 (781)
T 3v9f_A           18 NNYVLSITQDKQG-FLWFATEEG-LNKFDGTRF---ITYYK-EEQSS--SV-QSITGNELNEVYTDPVQPVIWIATQRAG   88 (781)
T ss_dssp             CSBEEEEEECTTS-CEEEEESSC-EEEECSSSE---EEECC-CSSCS--SS-CCCSCSCEEEEEECSSSSEEEEEESSSC
T ss_pred             cCEeEEEEECCCC-CEEEccCCc-CccccCCce---EEEEc-CCCCC--cc-ccccccccceEEEcCCCCEEEEEeCCCC
Confidence            4579999999998 466666776 777775432   12211 10000  00 0011256888888888873555666657


Q ss_pred             EEEEeccccceeeec-c-cc---ccCCCeeEEEEcC--CCCeEEEEe-cCCceEEEEEEccCCCceeeee-----cCCcC
Q psy15995        165 VRIWDTVNKEHILKN-E-FH---PIGGPIKDIAWSP--DNQRMVVVG-EGRERFGHVFMSETGTSVGEIS-----GQSKP  231 (683)
Q Consensus       165 i~iwd~~~~~~~~~~-~-~~---~~~~~i~~~~~s~--~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~  231 (683)
                      +..||..+++..... . ..   .....|.++...+  ++.. .++. ..+   +..++.++++......     .....
T Consensus        89 l~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~l-wi~t~~~g---l~~~~~~~~~~~~~~~~~~~~l~~~~  164 (781)
T 3v9f_A           89 LNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGL-WVCTYYRG---IEYLDIATGKFTHYNKSTVPALPSEQ  164 (781)
T ss_dssp             EEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEE-EEEESSSC---EEEEETTTTEEEEESTTTCTTCSCCC
T ss_pred             cceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCE-EEEECCCC---eeEEECCCCeEEeeccCcccCCCccc
Confidence            999998876532210 0 00   0123688888877  6654 4444 322   4555555443222111     12345


Q ss_pred             eEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc-------ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC
Q psy15995        232 INSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ-------EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA  304 (683)
Q Consensus       232 v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  304 (683)
                      |.++...+++.  +..++.++.+..||..+.+......       .....|.++...+++.+.+ ++.+ -+.+||..++
T Consensus       165 i~~i~~d~~g~--lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~  240 (781)
T 3v9f_A          165 TWTATEAEDGK--LYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWI-GTSK-GLALFNANTE  240 (781)
T ss_dssp             EEEEEEEETTE--EEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEE-EETT-EEEEEETTTT
T ss_pred             eEEEEECCCCC--EEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEE-EeCC-cHheECCCCC
Confidence            88888888875  5567766678889977765433211       1235689999988887555 4444 5899998776


Q ss_pred             eeEEeccCC-----ccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEE-------ec---C---cceeceEE
Q psy15995        305 DLVSELGNP-----AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFI-------MG---N---QVEDQQVS  366 (683)
Q Consensus       305 ~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~---~---~~~~~~~~  366 (683)
                      +........     .....|.++...+++. |..++..+-|.++|..++.......       ..   .   ......+.
T Consensus       241 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~  319 (781)
T 3v9f_A          241 TFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIF  319 (781)
T ss_dssp             EEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEE
T ss_pred             cEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEE
Confidence            654322110     1345799999888776 5556664568889987765432111       10   0   11122222


Q ss_pred             EEecCCEEEEEecCCcEEEEecCCCCcceeee--------eeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcce
Q psy15995        367 CLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI--------KGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDR  438 (683)
Q Consensus       367 ~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~  438 (683)
                      ... ...+.+|+.++-+..++.....-.....        ......|.++...+++.+ ..|+.++-|..++..++....
T Consensus       320 ~D~-~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~  397 (781)
T 3v9f_A          320 QDS-FNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKL-WIGTDGGGINVFENGKRVAIY  397 (781)
T ss_dssp             ECS-SCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCE-EEEEBSSCEEEEETTEEEEEC
T ss_pred             EeC-CCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCE-EEEeCCCcEEEEECCCCeEEE
Confidence            222 3457778878888888876532111100        012356899988887764 455656668889876543322


Q ss_pred             ecc--CCCCcceeEEEEe-CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCcee
Q psy15995        439 VQG--AGHGNQINGMKAT-GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKV  515 (683)
Q Consensus       439 ~~~--~~~~~~v~~~~~~-~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  515 (683)
                      ...  ......|.++..+ ...|..++.++-+..++..+.........                                
T Consensus       398 ~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~--------------------------------  445 (781)
T 3v9f_A          398 NKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELE--------------------------------  445 (781)
T ss_dssp             C-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCST--------------------------------
T ss_pred             ccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccC--------------------------------
Confidence            111  1234568888877 66778888777888888765432111000                                


Q ss_pred             eeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeec----CCcCeeEEEECCCCCEEEEEeCCCeEEEE
Q psy15995        516 SSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELD----HLGPVTDCSFSPSNEYLVASDAHRKVVLY  591 (683)
Q Consensus       516 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~d~~i~i~  591 (683)
                        ......+.++...+++.+.+. +. +-+..|+..+++........    ....|.++...++|.+.+.....| +..|
T Consensus       446 --~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~  520 (781)
T 3v9f_A          446 --KNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIY  520 (781)
T ss_dssp             --TTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEE
T ss_pred             --CCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEE
Confidence              001234677777777765554 44 55889998876654222111    146789999999998776554344 7778


Q ss_pred             ECCCCccccccc-eeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEe-ecCCCCCCeeEEEEccCCeEEEe
Q psy15995        592 RVPDFELAHNKE-WGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIII-KNAHPQSQITRLQWLDNDLLVSV  669 (683)
Q Consensus       592 ~~~~~~~~~~~~-~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~l~s~  669 (683)
                      +..+++...... .+.....|.++...++|++.+... +|.|..||..+++....- ..+-....|.++...+++.|..+
T Consensus       521 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~  599 (781)
T 3v9f_A          521 TPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAS  599 (781)
T ss_dssp             CTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEE
T ss_pred             eCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEE
Confidence            887665432211 011345789999999988666544 665588998776533211 11223456888877744444444


Q ss_pred             eCCCcEEEEee
Q psy15995        670 GQDCNTKIWEI  680 (683)
Q Consensus       670 ~~d~~v~vw~~  680 (683)
                      +..| |..++.
T Consensus       600 t~~G-l~~~~~  609 (781)
T 3v9f_A          600 TNTG-ISCYIT  609 (781)
T ss_dssp             CSSC-EEEEET
T ss_pred             cCCc-eEEEEC
Confidence            5555 444543

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.64  E-value=4.1e-14  Score=149.44  Aligned_cols=280  Identities=11%  Similarity=-0.010  Sum_probs=181.6

Q ss_pred             eeccceEEEeecCCc---cEEEE--eccccceeeecccc----ccCCCeeEEEEcCCCCeEEEEecCC---ceEEEEEEc
Q psy15995        149 VLSIGFYIASGDISG---KVRIW--DTVNKEHILKNEFH----PIGGPIKDIAWSPDNQRMVVVGEGR---ERFGHVFMS  216 (683)
Q Consensus       149 ~s~~~~~l~~~~~d~---~i~iw--d~~~~~~~~~~~~~----~~~~~i~~~~~s~~~~~l~~~~~~~---~~~~~~~~~  216 (683)
                      .+|+|.+++....++   .-.+|  +...++........    .+...+..++|||||++|+......   ...+++++.
T Consensus        75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl  154 (695)
T 2bkl_A           75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV  154 (695)
T ss_dssp             CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred             CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence            458898888765543   33444  44344322222111    2334688999999999999775422   256888998


Q ss_pred             cCCCceeeeecCCcCe--EEEEeecCCCeEEEEeeCCCe-------------EEEEcCCCCc----eeeeccccccCeEE
Q psy15995        217 ETGTSVGEISGQSKPI--NSCDFKPSRPFRIITGSEDNT-------------IAVFEGPPFK----FKMTKQEHSRFVQA  277 (683)
Q Consensus       217 ~~~~~~~~~~~~~~~v--~~~~~~~~~~~~l~~~~~d~~-------------i~iw~~~~~~----~~~~~~~~~~~v~~  277 (683)
                      ++++.+.  ..+...+  ..++|+|+++. |+.++.|..             |++|++.+++    .+.....+...+..
T Consensus       155 ~tg~~~~--~~~~~~~~~~~~~wspDg~~-l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~  231 (695)
T 2bkl_A          155 DSGEWSK--VDVIEGGKYATPKWTPDSKG-FYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQ  231 (695)
T ss_dssp             TTCCBCS--SCCBSCCTTCCCEECTTSSE-EEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEE
T ss_pred             CCCCCcC--CcccCcccccceEEecCCCE-EEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEE
Confidence            8887651  1122222  68999999996 777777665             9999988776    33334445667899


Q ss_pred             EEECCCCCEEEEEcCCC----cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC----CCcEEEEECCCCc
Q psy15995        278 VRYSPSGSHFASAGFDG----KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG----DKTCKLWDIETKS  349 (683)
Q Consensus       278 ~~~~~~~~~l~~~~~dg----~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~  349 (683)
                      +.|+|||++|+..+.++    .|++|+..+++......   +...+....+ ++++ ++..+.    ++.|.+||+.++.
T Consensus       232 ~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~---~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~  306 (695)
T 2bkl_A          232 SDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK---GVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPA  306 (695)
T ss_dssp             EEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE---CSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCS
T ss_pred             EEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeec---CCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCC
Confidence            99999999888877665    78888766665443332   4445556666 5666 555443    5789999998765


Q ss_pred             e--eeEEEecC-cceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeec-cccEEEEEEeCCCCEEEEEe----
Q psy15995        350 V--VSEFIMGN-QVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGH-NKPITALALSPDRGTVFTGS----  421 (683)
Q Consensus       350 ~--~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~----  421 (683)
                      .  ...+.... ......+.+. ++..+++...++..++|...........+..+ ...+..+.++|+++.++...    
T Consensus       307 ~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~  385 (695)
T 2bkl_A          307 RASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFT  385 (695)
T ss_dssp             GGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETT
T ss_pred             ccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence            3  23333332 2233344444 66677788888888887665323334444444 56677888999998777333    


Q ss_pred             CCCcEEEEcCCCCCcc
Q psy15995        422 HDGFITRWNAKTGEND  437 (683)
Q Consensus       422 ~dg~i~~w~~~~~~~~  437 (683)
                      ..++|++||+.+++..
T Consensus       386 ~P~~v~~~d~~~g~~~  401 (695)
T 2bkl_A          386 TPRQIYKTSVSTGKSE  401 (695)
T ss_dssp             EEEEEEEEETTTCCEE
T ss_pred             CCCEEEEEECCCCcEE
Confidence            3478999999887753

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.63  E-value=1.5e-12  Score=122.59  Aligned_cols=281  Identities=12%  Similarity=0.058  Sum_probs=188.5

Q ss_pred             cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCce
Q psy15995        271 HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSV  350 (683)
Q Consensus       271 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  350 (683)
                      ....+.++++.++|+..++...++.|.+||.. ++... +..+.....+.++++.++++.+++...++.|..+|.. ++.
T Consensus        18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~   94 (300)
T 2qc5_A           18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF   94 (300)
T ss_dssp             TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred             CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence            34578899999999988877778999999987 55443 2222344678999999999877776667889999988 554


Q ss_pred             eeEEEec-CcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEE
Q psy15995        351 VSEFIMG-NQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRW  429 (683)
Q Consensus       351 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w  429 (683)
                       ..+... .......+.+.+++...++...++.+..++.. +......+......+.++++.++++..++...++.|..+
T Consensus        95 -~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~  172 (300)
T 2qc5_A           95 -TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI  172 (300)
T ss_dssp             -EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred             -EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence             333332 22345566666777777776668889999886 222211222234578899999999876666667888888


Q ss_pred             cCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEE
Q psy15995        430 NAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIV  509 (683)
Q Consensus       430 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (683)
                      +. +++........                                                                  
T Consensus       173 ~~-~g~~~~~~~~~------------------------------------------------------------------  185 (300)
T 2qc5_A          173 TN-TGKLEEYPLPT------------------------------------------------------------------  185 (300)
T ss_dssp             CT-TCCEEEEECSS------------------------------------------------------------------
T ss_pred             CC-CCcEEEeeCCC------------------------------------------------------------------
Confidence            87 33322111000                                                                  


Q ss_pred             eCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEE
Q psy15995        510 ENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVV  589 (683)
Q Consensus       510 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~  589 (683)
                                ....+..+++++++++.++....+.|.+|+. ++.............+.+++++++|++.++...++.|.
T Consensus       186 ----------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~  254 (300)
T 2qc5_A          186 ----------NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIG  254 (300)
T ss_dssp             ----------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEE
T ss_pred             ----------CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEE
Confidence                      0113567888888887777767778999988 34332221112456688999999999777776778999


Q ss_pred             EEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCC
Q psy15995        590 LYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       590 i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~  638 (683)
                      .|+. +++... .........+.+++++++|++.++.. . .|..++.+
T Consensus       255 ~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~  299 (300)
T 2qc5_A          255 RITN-DNTIQE-YQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN  299 (300)
T ss_dssp             EECT-TSCEEE-EECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred             EECC-CCcEEE-EECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence            9998 444332 11111345688999999998777665 4 67766653

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.63  E-value=3e-14  Score=151.55  Aligned_cols=283  Identities=10%  Similarity=-0.024  Sum_probs=174.7

Q ss_pred             CCCCCceeecCCCCC--Cceeeecc-------cceee-c--CCCcccCCCeEEEeeCCCCCeEEEecC------CeEEEE
Q psy15995          9 TQRGQPIVLGGDPKG--KNFLYTNG-------NKYIF-A--TLPRTQRGQPIVLGGDPKGKNFLYTNG------NSVIIR   70 (683)
Q Consensus         9 ~p~~~~~~~~~~~~~--~~~~~~~~-------~~~~~-~--~~~~~~~~~~~~~~~s~~~~~l~~~~~------~~i~v~   70 (683)
                      +|+|+.+...-...+  ...++...       ..+++ .  .+.......+..++|||||++||++.+      ..|++|
T Consensus       115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~  194 (741)
T 1yr2_A          115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV  194 (741)
T ss_dssp             EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence            499998877554444  23333321       11221 1  122222225667899999999999842      369999


Q ss_pred             eCCCCcccccccCcccceEEEEECCCCcEEEEecCCCC--------------EEEEeCCCcccccccccccCCCCcccce
Q psy15995         71 NIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGK--------------VRIWDTVNKEHILKNEFHPIGGPIKDIG  136 (683)
Q Consensus        71 ~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~--------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~  136 (683)
                      |+++++.+.. ..+...+..++|||| +.|+.++.++.              |.+|++.++.....+-.....       
T Consensus       195 dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~-------  265 (741)
T 1yr2_A          195 GVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPE-------  265 (741)
T ss_dssp             ETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTT-------
T ss_pred             ECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCC-------
Confidence            9999987543 223333468999999 99988776544              899998776421111111100       


Q ss_pred             eeeeecceeeeEeeccceEEEeecCCc-----cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCC--ce
Q psy15995        137 TLLSLTSIRNILVLSIGFYIASGDISG-----KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR--ER  209 (683)
Q Consensus       137 ~~~~~~~i~~~~~s~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~--~~  209 (683)
                         ....+..+.|+|||++|+..+.++     .|.+||+.++.......+..+...+... ++|+|+.+++.+...  ..
T Consensus       266 ---~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~  341 (741)
T 1yr2_A          266 ---LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLK  341 (741)
T ss_dssp             ---CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTC
T ss_pred             ---CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCC
Confidence               002367889999999998876543     8999999876211011222223344444 348999998887643  23


Q ss_pred             EEEEEEccCC-Cceee-eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC-CCceeeeccc-cccCeEEEEECCCCC
Q psy15995        210 FGHVFMSETG-TSVGE-ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP-PFKFKMTKQE-HSRFVQAVRYSPSGS  285 (683)
Q Consensus       210 ~~~~~~~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~-~~~~v~~~~~~~~~~  285 (683)
                      .+.+++.+.+ ..... +..+...+..+.+.  +..++++...|+..++|... +++....+.. +...+..+.++|+++
T Consensus       342 ~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~  419 (741)
T 1yr2_A          342 KIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDR  419 (741)
T ss_dssp             EEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCS
T ss_pred             EEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCC
Confidence            3555555554 23333 34445556677777  33468888889988877654 4555555553 356788999999988


Q ss_pred             EEEEE----cCCCcEEEEeCCCCee
Q psy15995        286 HFASA----GFDGKVFLYDGASADL  306 (683)
Q Consensus       286 ~l~~~----~~dg~i~iw~~~~~~~  306 (683)
                      .++..    ...++|++||+.+++.
T Consensus       420 ~l~~~~ss~~~P~~i~~~d~~tg~~  444 (741)
T 1yr2_A          420 HAYLSFSSFTQPATVLALDPATAKT  444 (741)
T ss_dssp             CEEEEEEETTEEEEEEEEETTTTEE
T ss_pred             EEEEEEcCCCCCCEEEEEECCCCcE
Confidence            65532    2347899999988873

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.61  E-value=4.4e-12  Score=119.27  Aligned_cols=275  Identities=8%  Similarity=-0.028  Sum_probs=186.0

Q ss_pred             CCeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccc-cccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccc
Q psy15995         45 GQPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISD-IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILK  122 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~-~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~  122 (683)
                      ..+..++++++|+++++. .++.|.+||.. ++... .+..+...+.+++++++|++.++...++.|..+|.. ++. ..
T Consensus        20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~~   96 (300)
T 2qc5_A           20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-TE   96 (300)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EE
T ss_pred             CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-EE
Confidence            577889999999988877 46899999988 55433 233445679999999999988887777889999987 433 22


Q ss_pred             cccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEE
Q psy15995        123 NEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVV  202 (683)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  202 (683)
                      +....            ....+..+++.++|+++++...++.|..+|.. ++.. ..........+..+++.++++. .+
T Consensus        97 ~~~~~------------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l-~v  161 (300)
T 2qc5_A           97 YPLPQ------------PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNAL-WF  161 (300)
T ss_dssp             EECSS------------TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSE-EE
T ss_pred             ecCCC------------CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCE-EE
Confidence            21110            01457788999999988888778899999987 5433 2223323467899999999984 44


Q ss_pred             EecCCceEEEEEEccCCCceee-eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeee-ccccccCeEEEEE
Q psy15995        203 VGEGRERFGHVFMSETGTSVGE-ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT-KQEHSRFVQAVRY  280 (683)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~  280 (683)
                      +...... +..++. .++.... ...+...+..+++.+++.. .++....+.|.+|+. +++.... ...+...+.++++
T Consensus       162 ~~~~~~~-i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l-~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~  237 (300)
T 2qc5_A          162 TENQNNS-IGRITN-TGKLEEYPLPTNAAAPVGITSGNDGAL-WFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITA  237 (300)
T ss_dssp             EETTTTE-EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSE-EEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE
T ss_pred             EecCCCe-EEEECC-CCcEEEeeCCCCCCCcceEEECCCCCE-EEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEE
Confidence            4432222 344444 3433221 2234557889999999863 555556678999997 4443332 3334567899999


Q ss_pred             CCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEEC
Q psy15995        281 SPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI  345 (683)
Q Consensus       281 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  345 (683)
                      +++|+..++...++.|..|+. +++.. .+..+.....+.++++.++++..++.. . .|..+|.
T Consensus       238 d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p  298 (300)
T 2qc5_A          238 GKNSEIWFTEWGANQIGRITN-DNTIQ-EYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL  298 (300)
T ss_dssp             CSTTCEEEEETTTTEEEEECT-TSCEE-EEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred             CCCCCEEEeccCCCeEEEECC-CCcEE-EEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence            999997776666789999997 45433 222222455688999999988555543 4 6666664

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.59  E-value=1.9e-12  Score=122.61  Aligned_cols=240  Identities=10%  Similarity=0.040  Sum_probs=164.6

Q ss_pred             CeEEEeeCCCCCeEEE--------ecCCeEEEEeCCCCccccccc----CcccceEEEEECCC-CcEEEEecCCCCEEEE
Q psy15995         46 QPIVLGGDPKGKNFLY--------TNGNSVIIRNIENPAISDIYT----EHSCAVNVAKYSPS-GFYIASGDISGKVRIW  112 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~--------~~~~~i~v~~~~~~~~~~~~~----~h~~~v~~~~~s~d-~~~las~~~dg~i~iw  112 (683)
                      .+..++|+++|+++++        ..++.|.+||..+++......    ++...+.+++++++ |+++++...+ .|.+|
T Consensus        19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~-~l~~~   97 (314)
T 1pjx_A           19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL-GLLVV   97 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT-EEEEE
T ss_pred             CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC-CEEEE
Confidence            4567889999998888        467899999988887643222    36678999999999 8766655443 69999


Q ss_pred             eCCCcccccc-cccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC---------------ccEEEEecccccee
Q psy15995        113 DTVNKEHILK-NEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS---------------GKVRIWDTVNKEHI  176 (683)
Q Consensus       113 d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---------------~~i~iwd~~~~~~~  176 (683)
                      |.. ++.... ..... +         .....+..+++.++|+++++...+               +.|..||.. ++..
T Consensus        98 d~~-g~~~~~~~~~~~-~---------~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~  165 (314)
T 1pjx_A           98 QTD-GTFEEIAKKDSE-G---------RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI  165 (314)
T ss_dssp             ETT-SCEEECCSBCTT-S---------CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE
T ss_pred             eCC-CCEEEEEeccCC-C---------ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE
Confidence            988 543221 11100 0         011457889999999888776655               567777765 4322


Q ss_pred             eeccccccCCCeeEEEEc----CCCCeEEEEecCCceEEEEEEcc-CCC-----ceeeeecCC-cCeEEEEeecCCCeEE
Q psy15995        177 LKNEFHPIGGPIKDIAWS----PDNQRMVVVGEGRERFGHVFMSE-TGT-----SVGEISGQS-KPINSCDFKPSRPFRI  245 (683)
Q Consensus       177 ~~~~~~~~~~~i~~~~~s----~~~~~l~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~-~~v~~~~~~~~~~~~l  245 (683)
                      ..   .........++|+    |+++.++++...... +.+++.+ .++     ....+..+. ..+..+++++++.. +
T Consensus       166 ~~---~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~-i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l-~  240 (314)
T 1pjx_A          166 QV---DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKK-LWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNL-L  240 (314)
T ss_dssp             EE---EEEESSEEEEEEEECTTSCEEEEEEEETTTTE-EEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCE-E
T ss_pred             Ee---ccCCCCcceEEEecccCCCCCEEEEEECCCCe-EEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCE-E
Confidence            11   1122456889999    999877777644332 5566654 333     222334444 56788999999974 6


Q ss_pred             EEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEE-EEcCCCcEEEEeCCC
Q psy15995        246 ITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFA-SAGFDGKVFLYDGAS  303 (683)
Q Consensus       246 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~~  303 (683)
                      ++...++.|.+||..+++....+..+...+.+++++|+++.|+ +...++.|..|++..
T Consensus       241 v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          241 VANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             EEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             EEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            6666788999999887777666666667899999999999554 455567899999764

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.57  E-value=2.1e-12  Score=122.41  Aligned_cols=251  Identities=7%  Similarity=-0.004  Sum_probs=166.1

Q ss_pred             cccceEEEEECCCCcEEEE-------ecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeecc-ceE
Q psy15995         84 HSCAVNVAKYSPSGFYIAS-------GDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI-GFY  155 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las-------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~  155 (683)
                      .-....+++|+++|+++++       ...++.|.+||..+++... +....         .......+..++++++ |++
T Consensus        16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~---------~~~~~~~~~~i~~~~~~g~l   85 (314)
T 1pjx_A           16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPE---------VNGYGGIPAGCQCDRDANQL   85 (314)
T ss_dssp             CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE-EECCE---------ETTEECCEEEEEECSSSSEE
T ss_pred             cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEecc---------cCCCCCCCceEEEecCCCcE
Confidence            3345689999999988888       5678899999987775432 11100         0001145788999999 776


Q ss_pred             EEeecCCccEEEEeccccceeee-cccc--ccCCCeeEEEEcCCCCeEEEEecCC-----------ceEEEEEEccCCCc
Q psy15995        156 IASGDISGKVRIWDTVNKEHILK-NEFH--PIGGPIKDIAWSPDNQRMVVVGEGR-----------ERFGHVFMSETGTS  221 (683)
Q Consensus       156 l~~~~~d~~i~iwd~~~~~~~~~-~~~~--~~~~~i~~~~~s~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~  221 (683)
                      +++... +.|.+||.. ++.... ....  .....+.+++++++|+..++.....           .....++.++....
T Consensus        86 ~v~~~~-~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~  163 (314)
T 1pjx_A           86 FVADMR-LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQ  163 (314)
T ss_dssp             EEEETT-TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSC
T ss_pred             EEEECC-CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCC
Confidence            665543 478899988 654322 1111  1124588999999998766554321           00123444443233


Q ss_pred             eeeeecCCcCeEEEEee----cCCCeEEEEeeCCCeEEEEcCC-CCc-----eeeeccccc-cCeEEEEECCCCCEEEEE
Q psy15995        222 VGEISGQSKPINSCDFK----PSRPFRIITGSEDNTIAVFEGP-PFK-----FKMTKQEHS-RFVQAVRYSPSGSHFASA  290 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~----~~~~~~l~~~~~d~~i~iw~~~-~~~-----~~~~~~~~~-~~v~~~~~~~~~~~l~~~  290 (683)
                      ...+..+......++++    |+++.++++...++.|.+|+.. +++     ....+..+. ..+..++++++|+++++.
T Consensus       164 ~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~  243 (314)
T 1pjx_A          164 MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVAN  243 (314)
T ss_dssp             EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred             EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEE
Confidence            33333444557889999    9987545666678999999975 343     222333343 567889999999988877


Q ss_pred             cCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEE-CCCcEEEEECCCC
Q psy15995        291 GFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS-GDKTCKLWDIETK  348 (683)
Q Consensus       291 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~  348 (683)
                      ..++.|.+||..+++....+..  +...+.+++++|+++.|++++ .++.|..|++...
T Consensus       244 ~~~~~i~~~d~~~g~~~~~~~~--~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~  300 (314)
T 1pjx_A          244 WGSSHIEVFGPDGGQPKMRIRC--PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             ETTTEEEEECTTCBSCSEEEEC--SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             cCCCEEEEEcCCCCcEeEEEeC--CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence            7788999999887776666654  557899999999999565554 4578999988753

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.56  E-value=4.7e-12  Score=118.28  Aligned_cols=233  Identities=9%  Similarity=0.089  Sum_probs=161.7

Q ss_pred             cccceEEEEECCC-CcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC
Q psy15995         84 HSCAVNVAKYSPS-GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS  162 (683)
Q Consensus        84 h~~~v~~~~~s~d-~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  162 (683)
                      +..--.+..|+|+ +.++++...++.|..||..+++.. .+..               ...+.+++++++|+++++.  +
T Consensus        11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~---------------~~~~~~i~~~~dG~l~v~~--~   72 (297)
T 3g4e_A           11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVTM---------------DAPVSSVALRQSGGYVATI--G   72 (297)
T ss_dssp             CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEEC---------------SSCEEEEEEBTTSSEEEEE--T
T ss_pred             CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEeC---------------CCceEEEEECCCCCEEEEE--C
Confidence            4444568899995 556666677889999999876431 1111               1457889999999966654  5


Q ss_pred             ccEEEEeccccceeeecccc--ccCCCeeEEEEcCCCCeEEEEecCC-------ceEEEEEEccCCCceeeeecCCcCeE
Q psy15995        163 GKVRIWDTVNKEHILKNEFH--PIGGPIKDIAWSPDNQRMVVVGEGR-------ERFGHVFMSETGTSVGEISGQSKPIN  233 (683)
Q Consensus       163 ~~i~iwd~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~  233 (683)
                      +.|.+||..+++........  .....+..++++|+|++.+......       .....++..+.......+..+....+
T Consensus        73 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pn  152 (297)
T 3g4e_A           73 TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISN  152 (297)
T ss_dssp             TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEE
T ss_pred             CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecccccc
Confidence            68999999877643222211  1124578899999999666543221       11245666664433334444455678


Q ss_pred             EEEeecCCCeEEEEeeCCCeEEEEcC--CCCce-----eeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee
Q psy15995        234 SCDFKPSRPFRIITGSEDNTIAVFEG--PPFKF-----KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL  306 (683)
Q Consensus       234 ~~~~~~~~~~~l~~~~~d~~i~iw~~--~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~  306 (683)
                      .++|+|+++.++++.+.++.|.+|+.  .++..     ...+..+...+..+++.++|++.++....+.|..||..+++.
T Consensus       153 gi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~  232 (297)
T 3g4e_A          153 GLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKR  232 (297)
T ss_dssp             EEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCE
T ss_pred             ceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceE
Confidence            99999999876677777899999986  44432     222333445688999999998777777778899999988998


Q ss_pred             EEeccCCccccCeEEEEEc-cCCCEEEEEEC
Q psy15995        307 VSELGNPAHKGGVYAVAWK-PDGTQLLTASG  336 (683)
Q Consensus       307 ~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~  336 (683)
                      +..+..  +...+++++|. |+++.|++++.
T Consensus       233 ~~~i~~--p~~~~t~~~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          233 LQTVKL--PVDKTTSCCFGGKNYSEMYVTCA  261 (297)
T ss_dssp             EEEEEC--SSSBEEEEEEESGGGCEEEEEEB
T ss_pred             EEEEEC--CCCCceEEEEeCCCCCEEEEEcC
Confidence            888865  55679999998 88887776664

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=99.54  E-value=2.3e-08  Score=102.21  Aligned_cols=525  Identities=12%  Similarity=-0.001  Sum_probs=276.7

Q ss_pred             CeEEEecCCeEEEEeCCCCc-ccccccCcccceEEEEECCCCcEEEEec-CCCCEEEEeCCCcccccccccccCCCCccc
Q psy15995         57 KNFLYTNGNSVIIRNIENPA-ISDIYTEHSCAVNVAKYSPSGFYIASGD-ISGKVRIWDTVNKEHILKNEFHPIGGPIKD  134 (683)
Q Consensus        57 ~~l~~~~~~~i~v~~~~~~~-~~~~~~~h~~~v~~~~~s~d~~~las~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  134 (683)
                      .+|.++..+.|+..|+.... ....+...-.....++|++.+..|..++ ..+.|..+++........+-..        
T Consensus        10 ~~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~--------   81 (619)
T 3s94_A           10 PLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS--------   81 (619)
T ss_dssp             CCEEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECS--------
T ss_pred             ceEEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeC--------
Confidence            46778888999999998653 2222333455678999999666665544 4577888888755211111000        


Q ss_pred             ceeeeeecceeeeEeeccc-eEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEE
Q psy15995        135 IGTLLSLTSIRNILVLSIG-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHV  213 (683)
Q Consensus       135 ~~~~~~~~~i~~~~~s~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~  213 (683)
                           .......+++.+.+ +..++-...+.|.+.++........  ..........|++.|.+..|+.+..+....+..
T Consensus        82 -----~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l--~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r  154 (619)
T 3s94_A           82 -----GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVL--FWQELDQPRAIALDPSSGFMYWTDWGEVPKIER  154 (619)
T ss_dssp             -----SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSCCCCEEEETTTTEEEEEECSSSCEEEE
T ss_pred             -----CCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEE--EeCCCCCCceEEEecCCCeEEEeccCCCCEEEE
Confidence                 11456788999854 4555556678999999876532211  112235678999999877777776443333344


Q ss_pred             EEccCCCceeee-ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC
Q psy15995        214 FMSETGTSVGEI-SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF  292 (683)
Q Consensus       214 ~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  292 (683)
                      ..++ |.....+ ...-...+.+++++++..+.++-...+.|...+...........+.......+++..+ ..+.+-..
T Consensus       155 ~~~d-G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~  232 (619)
T 3s94_A          155 AGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWS  232 (619)
T ss_dssp             EETT-SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTT
T ss_pred             EECC-CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCC
Confidence            4443 3333332 3345568899999987765666667788999998654433332222223346677655 34444445


Q ss_pred             CCcEEEEeCCCCeeEEeccCCccccCeEEEEEc-cCCCEEE--EE----ECCCcEEEEECCCCceeeEEEecCcceeceE
Q psy15995        293 DGKVFLYDGASADLVSELGNPAHKGGVYAVAWK-PDGTQLL--TA----SGDKTCKLWDIETKSVVSEFIMGNQVEDQQV  365 (683)
Q Consensus       293 dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~--~~----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  365 (683)
                      .+.|...|..+++....+..  .......+++. |..+--.  -|    +.-..+.+-.............+........
T Consensus       233 ~~~V~~~d~~tg~~~~~i~~--~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~  310 (619)
T 3s94_A          233 THSILACNKYTGEGLREIHS--DIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGK  310 (619)
T ss_dssp             TCSEEEEESSSCCCCEECCS--CCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSS
T ss_pred             CCEEEEEECCCCcccEEEec--CCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCc
Confidence            67899999888876555532  22223344332 2110000  00    0001122221111000000000000000000


Q ss_pred             EEEecCCEEEEEecCCcEEEEecCCCCcceeeee-eccccEEEEEEeCCCCEEEEEe-CCCcEEEEcCCCCCcceeccCC
Q psy15995        366 SCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIK-GHNKPITALALSPDRGTVFTGS-HDGFITRWNAKTGENDRVQGAG  443 (683)
Q Consensus       366 ~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~w~~~~~~~~~~~~~~  443 (683)
                      .|....+.++..+..+.|+..++.........+. ..-..+.+++|.+.+..|+.+. ..+.|..+++......... ..
T Consensus       311 ~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~-~~  389 (619)
T 3s94_A          311 TCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVV-TA  389 (619)
T ss_dssp             CBCSSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CS
T ss_pred             ccCCCCceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEE-EC
Confidence            1111123334444566788778765432211111 1234578899999666666554 5778999988765443333 22


Q ss_pred             CCcceeEEEEe--CC-eEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecC
Q psy15995        444 HGNQINGMKAT--GE-LLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPI  520 (683)
Q Consensus       444 ~~~~v~~~~~~--~~-~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  520 (683)
                      .......++++  ++ .+++-...+.|.+.++......                                    ......
T Consensus       390 ~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~------------------------------------~l~~~~  433 (619)
T 3s94_A          390 QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRK------------------------------------ILISED  433 (619)
T ss_dssp             SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE------------------------------------EEECTT
T ss_pred             CCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEE------------------------------------EEEECC
Confidence            23445566666  44 4445455678888887654210                                    000011


Q ss_pred             CCCCcEEEEccCCCEEEEEcC--CCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEe-CCCeEEEEECCCCc
Q psy15995        521 DYEPSSISLDHEHGLVAVGGA--DSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASD-AHRKVVLYRVPDFE  597 (683)
Q Consensus       521 ~~~~~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~  597 (683)
                      -..+..+++.|....|.....  .+.|...+++..... ......-.....+++++++..|..+. ..+.|..+++....
T Consensus       434 l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~-~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~  512 (619)
T 3s94_A          434 LEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRV-VLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTG  512 (619)
T ss_dssp             CCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCC
T ss_pred             CCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccE-EEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCc
Confidence            235788999997666655542  367777777654432 12222345678999999777777765 45678899986543


Q ss_pred             cccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCc
Q psy15995        598 LAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPA  641 (683)
Q Consensus       598 ~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~  641 (683)
                      ...... . .-....+|+...+ .+..+-...+.|...+..++.
T Consensus       513 ~~~~~~-~-~l~~P~glav~~~-~ly~tD~~~~~I~~~~k~~g~  553 (619)
T 3s94_A          513 RRVLVE-D-KIPHIFGFTLLGD-YVYWTDWQRRSIERVHKRSAE  553 (619)
T ss_dssp             CEEEEE-C-CCCSSCCEEEETT-EEEEECTTSSCEEEEESSSCC
T ss_pred             eEEEec-c-CCCCcEEEEEECC-EEEEeecCCCeEEEEEcCCCc
Confidence            321111 0 1122334555433 333343345567777766663

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.54  E-value=1.3e-12  Score=137.58  Aligned_cols=247  Identities=12%  Similarity=0.043  Sum_probs=166.2

Q ss_pred             CcccceEEEEECCCCcEEEE-----ecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEE
Q psy15995         83 EHSCAVNVAKYSPSGFYIAS-----GDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIA  157 (683)
Q Consensus        83 ~h~~~v~~~~~s~d~~~las-----~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  157 (683)
                      +|...+..++|||||++||-     |+...+|++||+.+++.+.. ....              .....++|+ ||+.|+
T Consensus       126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~--------------~k~~~~~Ws-Dg~~l~  189 (693)
T 3iuj_A          126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKD--------------VKFSGISWL-GNEGFF  189 (693)
T ss_dssp             TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEE--------------EESCCCEEE-TTTEEE
T ss_pred             CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCC--------------ceeccEEEe-CCCEEE
Confidence            46678999999999999984     33335699999999875432 1110              123578999 999998


Q ss_pred             eecCCc-------------cEEEEeccccce--eeeccccc-cCCCeeEEEEcCCCCeEEEEecCC--ceEEEEEEccCC
Q psy15995        158 SGDISG-------------KVRIWDTVNKEH--ILKNEFHP-IGGPIKDIAWSPDNQRMVVVGEGR--ERFGHVFMSETG  219 (683)
Q Consensus       158 ~~~~d~-------------~i~iwd~~~~~~--~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~~~--~~~~~~~~~~~~  219 (683)
                      .++.+.             .|++|++.++..  ........ +.....++.|+|||++|++.....  ...+.+++.+.+
T Consensus       190 y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~  269 (693)
T 3iuj_A          190 YSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE  269 (693)
T ss_dssp             EEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST
T ss_pred             EEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC
Confidence            887774             399999987643  22222232 345578899999999987766432  224566666555


Q ss_pred             C-ceeeeecCCcCeEEEEeecCCCeEEEEeeCC---CeEEEEcCCCCce--eeeccccccCeEEEEECCCCCEEEEEcCC
Q psy15995        220 T-SVGEISGQSKPINSCDFKPSRPFRIITGSED---NTIAVFEGPPFKF--KMTKQEHSRFVQAVRYSPSGSHFASAGFD  293 (683)
Q Consensus       220 ~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  293 (683)
                      . ....+..+....... +++++..+++....+   +.|..+++.++..  ...+..|...+.  .|+++++.|+....+
T Consensus       270 ~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~  346 (693)
T 3iuj_A          270 NAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMV  346 (693)
T ss_dssp             TCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEE
T ss_pred             CCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEE
Confidence            3 455667776666665 666666545555443   6789999877654  234455655555  899999988766554


Q ss_pred             C---cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECC----CcEEEEECCCCce
Q psy15995        294 G---KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD----KTCKLWDIETKSV  350 (683)
Q Consensus       294 g---~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~  350 (683)
                      +   .|++|++..+. ...+..+ ..+.+..+.++++++.++....+    +.+..||+.+++.
T Consensus       347 ~g~~~l~~~d~~g~~-~~~l~~p-~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~  408 (693)
T 3iuj_A          347 DATARVEQFDYEGKR-VREVALP-GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI  408 (693)
T ss_dssp             TTEEEEEEECTTSCE-EEEECCS-SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred             CCeeEEEEEECCCCe-eEEeecC-CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence            3   68999987544 4444332 34567778888888877666544    7899999987754

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.51  E-value=6.2e-13  Score=125.45  Aligned_cols=265  Identities=11%  Similarity=-0.023  Sum_probs=168.3

Q ss_pred             eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEec----------CCCCEEEEeCCCcccccccccccCCCCcccc
Q psy15995         66 SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD----------ISGKVRIWDTVNKEHILKNEFHPIGGPIKDI  135 (683)
Q Consensus        66 ~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  135 (683)
                      .|.++|..+++.+.++.....+  .+++||||++++++.          .++.|.+||+.+++.+.++........    
T Consensus        47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~----  120 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF----  120 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSC----
T ss_pred             eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccc----
Confidence            8889999999999888755556  799999999998875          367899999999998888765410000    


Q ss_pred             eeeeeecceeeeEeeccceEEEeecC--CccEEE--EeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEE
Q psy15995        136 GTLLSLTSIRNILVLSIGFYIASGDI--SGKVRI--WDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFG  211 (683)
Q Consensus       136 ~~~~~~~~i~~~~~s~~~~~l~~~~~--d~~i~i--wd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~  211 (683)
                         ........++++|||++|+++..  +..+.+  +|+.+   +......   +.   ..+.|+++..+.+...... .
T Consensus       121 ---~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~---~~---~~~~p~g~~~~~~~~~dg~-~  187 (368)
T 1mda_H          121 ---SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA---SC---FHIHPGAAATHYLGSCPAS-L  187 (368)
T ss_dssp             ---CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS---SC---CCCEEEETTEEECCCCTTS-C
T ss_pred             ---ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC---Cc---eEEccCCCeEEEEEcCCCC-E
Confidence               00024568899999999998864  467888  99977   2222211   11   1122333333222211111 1


Q ss_pred             EEEEccC-----CCce----eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc--eeeeccc----------
Q psy15995        212 HVFMSET-----GTSV----GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK--FKMTKQE----------  270 (683)
Q Consensus       212 ~~~~~~~-----~~~~----~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~----------  270 (683)
                      .+.+.++     ++..    ..+.-...+.   . .+++.. ++..+. +.+.+.|.....  ....+..          
T Consensus       188 ~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~-~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~  261 (368)
T 1mda_H          188 AASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGM-LVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNF  261 (368)
T ss_dssp             EEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTE-EEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTE
T ss_pred             EEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCE-EEEEcC-CEEEEEECCCCcceEEEEEEecccccccccc
Confidence            2233332     2211    1111122333   3 666654 555555 899999976532  2222210          


Q ss_pred             cccCeEEEEECCCCCEEEEEcC---------CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCE-EEEEE-CCCc
Q psy15995        271 HSRFVQAVRYSPSGSHFASAGF---------DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQ-LLTAS-GDKT  339 (683)
Q Consensus       271 ~~~~v~~~~~~~~~~~l~~~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~-~dg~  339 (683)
                      .......++++|+++.++++..         ++.+.++|+.+++.+..+..   ......++|+||+++ +++.. .++.
T Consensus       262 ~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v---g~~p~gi~~s~Dg~~l~va~~~~~~~  338 (368)
T 1mda_H          262 RSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN---GHDSDAIIAAQDGASDNYANSAGTEV  338 (368)
T ss_dssp             EECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE---EEEECEEEECCSSSCEEEEEETTTTE
T ss_pred             ccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC---CCCcceEEECCCCCEEEEEccCCCCe
Confidence            1111222689999998876543         23567999999999988864   336889999999984 55556 5899


Q ss_pred             EEEEECCCCceeeEEEecC
Q psy15995        340 CKLWDIETKSVVSEFIMGN  358 (683)
Q Consensus       340 i~iwd~~~~~~~~~~~~~~  358 (683)
                      |.++|+.+++.+.++..+.
T Consensus       339 VsVID~~t~kvv~~I~vg~  357 (368)
T 1mda_H          339 LDIYDAASDQDQSSVELDK  357 (368)
T ss_dssp             EEEEESSSCEEEEECCCCS
T ss_pred             EEEEECCCCcEEEEEECCC
Confidence            9999999999988775443

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.51  E-value=2.2e-11  Score=118.50  Aligned_cols=240  Identities=10%  Similarity=-0.027  Sum_probs=162.7

Q ss_pred             cceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCc--
Q psy15995         86 CAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISG--  163 (683)
Q Consensus        86 ~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~--  163 (683)
                      .....++|+++|+++++...++.|++||..++.........               .... ++++++++.|+++..++  
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~---------------~~~~-ia~~~~g~~l~~~d~~~~~  194 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF---------------KGGK-PAVTKDKQRVYSIGWEGTH  194 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC---------------CBCB-CEECTTSSEEEEEBSSTTC
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC---------------CCCc-eeEecCCCcEEEEecCCCc
Confidence            46889999999998888777889999999877544322211               2233 89999999988888766  


Q ss_pred             cEEEEeccccceeeec-cccc-cCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceee----eecCCcCe--EEE
Q psy15995        164 KVRIWDTVNKEHILKN-EFHP-IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGE----ISGQSKPI--NSC  235 (683)
Q Consensus       164 ~i~iwd~~~~~~~~~~-~~~~-~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v--~~~  235 (683)
                      .|.+++...+...... .... ....+.+++++|++..|+++..  ...+..++.+.+.....    ..++...-  ..+
T Consensus       195 ~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~--~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~i  272 (409)
T 3hrp_A          195 TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS--NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYL  272 (409)
T ss_dssp             EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT--TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEE
T ss_pred             eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC--CCcEEEEECCCCCEEEEecccccCCCCCCccccE
Confidence            7888888765432221 1111 3466789999996666666443  33456666665543222    22222222  399


Q ss_pred             EeecCCCeEEEEeeCCCeEEEEcCCCCceeeecccc---------------ccCeEEEEECCCCCEEEEEc-CCCcEEEE
Q psy15995        236 DFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH---------------SRFVQAVRYSPSGSHFASAG-FDGKVFLY  299 (683)
Q Consensus       236 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~-~dg~i~iw  299 (683)
                      +|+|++..++++-..++.|+.|+....  ...+.++               -.....++++++|+++++-. .++.|+.|
T Consensus       273 a~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~  350 (409)
T 3hrp_A          273 IYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKL  350 (409)
T ss_dssp             EEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEE
T ss_pred             EEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEE
Confidence            999976656777778899999986543  2222222               24578999999999777777 78999999


Q ss_pred             eCCCCeeEEeccCC------------ccccCeEEEEEccCCCEEEEEECCCcEEEEEC
Q psy15995        300 DGASADLVSELGNP------------AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI  345 (683)
Q Consensus       300 ~~~~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  345 (683)
                      +..++.........            ..-.....+++++++.++++-..++.|+.+++
T Consensus       351 ~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          351 DILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             ETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             ECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence            98777654333210            01246889999999877777777788887765

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.51  E-value=1.4e-11  Score=119.87  Aligned_cols=241  Identities=7%  Similarity=0.008  Sum_probs=159.6

Q ss_pred             CCCeEEEeeCCCCCeEEEec-CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCC--CEEEEeCCCcccc
Q psy15995         44 RGQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISG--KVRIWDTVNKEHI  120 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~~-~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg--~i~iwd~~~~~~~  120 (683)
                      -..+..++++|+|+++++.. ++.|++||.++++......... ... ++|+|++++|++++.++  .|.+|+..++...
T Consensus       130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~  207 (409)
T 3hrp_A          130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP  207 (409)
T ss_dssp             CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred             cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence            35788999999999766664 5799999999887765554433 333 99999999998888766  6888887655432


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeecc--ccccCCCe-e-EEEEcCC
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNE--FHPIGGPI-K-DIAWSPD  196 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~i-~-~~~~s~~  196 (683)
                      ..+.....          .....+..++++|++..|..+..++.|+.||..++.......  .....+.- . .++|+|+
T Consensus       208 ~~~g~~~~----------~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~  277 (409)
T 3hrp_A          208 TRIGQLGS----------TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFV  277 (409)
T ss_dssp             EEEEECCT----------TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETT
T ss_pred             EEeeeccc----------hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCC
Confidence            22200000          011456789999944444446778899999998765322200  11111222 3 9999997


Q ss_pred             CCeEEEEecCCceEEEEEEccCCCceeeeecCC---------------cCeEEEEeecCCCeEEEEee-CCCeEEEEcCC
Q psy15995        197 NQRMVVVGEGRERFGHVFMSETGTSVGEISGQS---------------KPINSCDFKPSRPFRIITGS-EDNTIAVFEGP  260 (683)
Q Consensus       197 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~~l~~~~-~d~~i~iw~~~  260 (683)
                      +..|+++...... +..++.+ +. ...+.++.               .....++++|++. ++++-. .++.|+.|+..
T Consensus       278 ~g~lyv~d~~~~~-I~~~~~~-g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~  353 (409)
T 3hrp_A          278 DSNFYMSDQNLSS-VYKITPD-GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDIL  353 (409)
T ss_dssp             TTEEEEEETTTTE-EEEECTT-CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETT
T ss_pred             CCEEEEEeCCCCE-EEEEecC-CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECC
Confidence            7777776655432 3444333 22 33333332               3578999999998 477777 88999999977


Q ss_pred             CCceeeecccc---------------ccCeEEEEECCCCCEEEEEcCCCcEEEEeC
Q psy15995        261 PFKFKMTKQEH---------------SRFVQAVRYSPSGSHFASAGFDGKVFLYDG  301 (683)
Q Consensus       261 ~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  301 (683)
                      +++.. .+.++               -.....+++++++.++++-..++.|+.+++
T Consensus       354 ~G~v~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          354 DGYVS-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             TTEEE-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             CCEEE-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence            77643 33332               245889999999887777777888887764

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.51  E-value=1.1e-11  Score=128.90  Aligned_cols=309  Identities=12%  Similarity=0.080  Sum_probs=205.1

Q ss_pred             CCCeEEEecCCeEEEEeCCCCcccccccCcccc-----------eEEEEECCCCcEEEEecCCCCEEEEeCCCccccccc
Q psy15995         55 KGKNFLYTNGNSVIIRNIENPAISDIYTEHSCA-----------VNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKN  123 (683)
Q Consensus        55 ~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~-----------v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~  123 (683)
                      ++..++.+.++.|+-+|.++++.+-.+......           -..+++  ++..|+.++.|+.|..+|..+|+.+.++
T Consensus        77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~  154 (677)
T 1kb0_A           77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ  154 (677)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence            444555556688999999998876655432210           012222  4567888889999999999999988777


Q ss_pred             ccccCCCCcccceeeeeecceeeeEeeccceEEEeec-----CCccEEEEeccccceeeeccccccC-------------
Q psy15995        124 EFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD-----ISGKVRIWDTVNKEHILKNEFHPIG-------------  185 (683)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----~d~~i~iwd~~~~~~~~~~~~~~~~-------------  185 (683)
                      .........         ..+..--...++..++..+     .++.|+.+|..+|+.+.........             
T Consensus       155 ~~~~~~~~~---------~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g  225 (677)
T 1kb0_A          155 NTFEGQKGS---------LTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRA  225 (677)
T ss_dssp             ETTTTCCSS---------CBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHH
T ss_pred             cCCcCcCcC---------cccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccc
Confidence            654100000         0111111112344433332     2799999999999988766543211             


Q ss_pred             -----------------CCeeEEEEcCCCCeEEEEecCCc-----------------eEEEEEEccCCCceeeeec--CC
Q psy15995        186 -----------------GPIKDIAWSPDNQRMVVVGEGRE-----------------RFGHVFMSETGTSVGEISG--QS  229 (683)
Q Consensus       186 -----------------~~i~~~~~s~~~~~l~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~--~~  229 (683)
                                       .....++++|++..+++...+..                 ..+..++.++|+.+..+..  |.
T Consensus       226 ~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d  305 (677)
T 1kb0_A          226 ARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGD  305 (677)
T ss_dssp             HTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTC
T ss_pred             cccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCc
Confidence                             11235788999888887765431                 1366777788988877654  21


Q ss_pred             -------cCeEEEEeecCCC--eEEEEeeCCCeEEEEcCCCCceeeeccccc-----------cCe--------------
Q psy15995        230 -------KPINSCDFKPSRP--FRIITGSEDNTIAVFEGPPFKFKMTKQEHS-----------RFV--------------  275 (683)
Q Consensus       230 -------~~v~~~~~~~~~~--~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-----------~~v--------------  275 (683)
                             .....+....+|+  ..++.++.+|.++++|..+++.+.......           ..+              
T Consensus       306 ~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~  385 (677)
T 1kb0_A          306 NWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDA  385 (677)
T ss_dssp             CSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEEC
T ss_pred             ccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEE
Confidence                   1222333344662  358999999999999999999876553211           011              


Q ss_pred             ----------EEEEECCCCCEEEEEcC-------------------------------------------CCcEEEEeCC
Q psy15995        276 ----------QAVRYSPSGSHFASAGF-------------------------------------------DGKVFLYDGA  302 (683)
Q Consensus       276 ----------~~~~~~~~~~~l~~~~~-------------------------------------------dg~i~iw~~~  302 (683)
                                ..++++|++.++++...                                           .|.|..||+.
T Consensus       386 ~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~  465 (677)
T 1kb0_A          386 VPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPV  465 (677)
T ss_dssp             SSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETT
T ss_pred             CcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCC
Confidence                      14688998888877543                                           2789999999


Q ss_pred             CCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEE
Q psy15995        303 SADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTV  377 (683)
Q Consensus       303 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  377 (683)
                      +++.+..+.   +..++....+..++..++.++.||.+++||.++++.+.++..........+.+..+++.+++.
T Consensus       466 tG~~~W~~~---~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~  537 (677)
T 1kb0_A          466 AQKAAWSVE---HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSV  537 (677)
T ss_dssp             TTEEEEEEE---ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred             CCcEEeecC---CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEE
Confidence            999888875   334455555667788899999999999999999999999988877777777777777655443

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.48  E-value=1.4e-11  Score=128.44  Aligned_cols=308  Identities=13%  Similarity=0.081  Sum_probs=200.2

Q ss_pred             CCCeEEEecCCeEEEEeCCCCcccccccCcccc----------e-EEEEECCCCcEEEEecCCCCEEEEeCCCccccccc
Q psy15995         55 KGKNFLYTNGNSVIIRNIENPAISDIYTEHSCA----------V-NVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKN  123 (683)
Q Consensus        55 ~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~----------v-~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~  123 (683)
                      ++..++.+.++.|+-+|.++|+.+-.+..+...          + ..+++  ++..|+.++.|+.|..+|..+|+.+.+.
T Consensus        70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~  147 (689)
T 1yiq_A           70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV  147 (689)
T ss_dssp             TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence            444555556778999999999887665433211          0 11122  4557888889999999999999988776


Q ss_pred             ccccCCCCcccceeeeeecceeeeEeeccceEEEeec-----CCccEEEEeccccceeeecccccc--------------
Q psy15995        124 EFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD-----ISGKVRIWDTVNKEHILKNEFHPI--------------  184 (683)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----~d~~i~iwd~~~~~~~~~~~~~~~--------------  184 (683)
                      .........         ..+..--...++..++..+     .+|.|..||..+|+.+........              
T Consensus       148 ~~~~~~~~~---------~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~  218 (689)
T 1yiq_A          148 DTRADHKRS---------YTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIA  218 (689)
T ss_dssp             ECCSCTTSC---------CBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHH
T ss_pred             cCcCCCCCC---------ccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccc
Confidence            553000000         0011000112454444332     378999999999998776543110              


Q ss_pred             ---------------CCCeeEEEEcCCCCeEEEEecCCc-----------------eEEEEEEccCCCceeeeecC--C-
Q psy15995        185 ---------------GGPIKDIAWSPDNQRMVVVGEGRE-----------------RFGHVFMSETGTSVGEISGQ--S-  229 (683)
Q Consensus       185 ---------------~~~i~~~~~s~~~~~l~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~--~-  229 (683)
                                     ......++++|+...+++...+..                 ..+..++.++|+.+..+...  . 
T Consensus       219 ~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~  298 (689)
T 1yiq_A          219 AKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDA  298 (689)
T ss_dssp             HTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCC
T ss_pred             ccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccc
Confidence                           011236789998888888765531                 12677888899988877642  2 


Q ss_pred             ------cCeEEEEeecCCC--eEEEEeeCCCeEEEEcCCCCceeeeccccc----------------------------c
Q psy15995        230 ------KPINSCDFKPSRP--FRIITGSEDNTIAVFEGPPFKFKMTKQEHS----------------------------R  273 (683)
Q Consensus       230 ------~~v~~~~~~~~~~--~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----------------------------~  273 (683)
                            ..........++.  ..++.++.+|.++++|..+++.+.......                            .
T Consensus       299 wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~  378 (689)
T 1yiq_A          299 WDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKR  378 (689)
T ss_dssp             SCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSC
T ss_pred             ccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCe
Confidence                  1222222223443  248889999999999999998874321100                            0


Q ss_pred             -----------CeEEEEECCCCCEEEEEcC---------------------------------------------CCcEE
Q psy15995        274 -----------FVQAVRYSPSGSHFASAGF---------------------------------------------DGKVF  297 (683)
Q Consensus       274 -----------~v~~~~~~~~~~~l~~~~~---------------------------------------------dg~i~  297 (683)
                                 .-..++++|+...+++...                                             +|.|.
T Consensus       379 ~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~  458 (689)
T 1yiq_A          379 NLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLI  458 (689)
T ss_dssp             EEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEE
T ss_pred             eEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEE
Confidence                       0112688888887776522                                             37799


Q ss_pred             EEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEE
Q psy15995        298 LYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLT  376 (683)
Q Consensus       298 iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  376 (683)
                      .||+.+++.+.....   ..+...-.+...+.+++.++.||.++.||.++++.+.++..........+.+..+++..++
T Consensus       459 A~D~~tG~~~W~~~~---~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~  534 (689)
T 1yiq_A          459 AWDPVKQQAAWEVPY---VTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT  534 (689)
T ss_dssp             EEETTTTEEEEEEEE---SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             EEECCCCCeEeEccC---CCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence            999999999888753   2333334556678899999999999999999999999998887776667777777764443

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.48  E-value=2.2e-11  Score=126.57  Aligned_cols=311  Identities=12%  Similarity=0.086  Sum_probs=194.2

Q ss_pred             CCEEEEEcCCCcEEEEeCCCCeeEEeccCCcccc---------CeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEE
Q psy15995        284 GSHFASAGFDGKVFLYDGASADLVSELGNPAHKG---------GVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEF  354 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  354 (683)
                      +..+++++.++.|..+|..+|+.+..+.......         ....+++  ++..+++++.|+.|..+|..+++.+.++
T Consensus        77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~  154 (677)
T 1kb0_A           77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ  154 (677)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence            4467777778999999999999988876432110         0112333  3667888899999999999999999888


Q ss_pred             Eec-Ccce--eceEEEEecCCEEEEEec------CCcEEEEecCCCCcceeeeee-------------------------
Q psy15995        355 IMG-NQVE--DQQVSCLWQGDYLLTVSL------SGFISYLDVNNPSTPIRVIKG-------------------------  400 (683)
Q Consensus       355 ~~~-~~~~--~~~~~~~~~~~~l~~~~~------~g~i~~~~~~~~~~~~~~~~~-------------------------  400 (683)
                      ... ....  .........+..++++..      ++.++.+|..++...-+....                         
T Consensus       155 ~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~  234 (677)
T 1kb0_A          155 NTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK  234 (677)
T ss_dssp             ETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred             cCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCc
Confidence            765 1100  011111124566666664      688999999875543222110                         


Q ss_pred             ------ccccEEEEEEeCCCCEEEEEeCCCc-------------------EEEEcCCCCCcceeccCCCCcceeEEEEeC
Q psy15995        401 ------HNKPITALALSPDRGTVFTGSHDGF-------------------ITRWNAKTGENDRVQGAGHGNQINGMKATG  455 (683)
Q Consensus       401 ------~~~~v~~~~~~~~~~~l~~~~~dg~-------------------i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~  455 (683)
                            .......++++|++..++.+..++.                   |..+|..+++..-.+...+..         
T Consensus       235 ~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d---------  305 (677)
T 1kb0_A          235 WWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGD---------  305 (677)
T ss_dssp             HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTC---------
T ss_pred             eeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCc---------
Confidence                  1111235678888888888876653                   444444443332222110000         


Q ss_pred             CeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCC--
Q psy15995        456 ELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEH--  533 (683)
Q Consensus       456 ~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  533 (683)
                                   .||.                                              .....+..+....+|  
T Consensus       306 -------------~wd~----------------------------------------------~~~~~p~l~~~~~dG~~  326 (677)
T 1kb0_A          306 -------------NWDY----------------------------------------------TSTQPMILADIKIAGKP  326 (677)
T ss_dssp             -------------CSCC----------------------------------------------CCCSCCEEEEEEETTEE
T ss_pred             -------------cccc----------------------------------------------ccCCCcEEEecccCCcE
Confidence                         0000                                              001122223333466  


Q ss_pred             -CEEEEEcCCCcEEEEEcCCCccCcceeecCCc----------Ce------------------------eEEEECCCCCE
Q psy15995        534 -GLVAVGGADSKVHIYELNNKSLSPKAELDHLG----------PV------------------------TDCSFSPSNEY  578 (683)
Q Consensus       534 -~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----------~v------------------------~~~~~s~~~~~  578 (683)
                       +.++.++.+|.++++|..+++++.........          ++                        ..++|+|++.+
T Consensus       327 ~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~  406 (677)
T 1kb0_A          327 RKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL  406 (677)
T ss_dssp             EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE
T ss_pred             eeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCE
Confidence             67888999999999999998876443322100          00                        25688998888


Q ss_pred             EEEEeC-------------------------------------------CCeEEEEECCCCccccccceeeecccEEEEE
Q psy15995        579 LVASDA-------------------------------------------HRKVVLYRVPDFELAHNKEWGFHSAKVNCVA  615 (683)
Q Consensus       579 l~~~~~-------------------------------------------d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~  615 (683)
                      +++...                                           .+.|..||+.+++.+-...   +..++....
T Consensus       407 ~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~---~~~~~~~g~  483 (677)
T 1kb0_A          407 VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE---HVSPWNGGT  483 (677)
T ss_dssp             EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE---ESSSCCCCE
T ss_pred             EEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC---CCCCCcCcc
Confidence            877543                                           2789999999999876554   444555666


Q ss_pred             ecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCCeEEE
Q psy15995        616 WSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVS  668 (683)
Q Consensus       616 ~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s  668 (683)
                      ++.++.+++.++.||.+++||..+++.+..+...+ .....-+.|. +++.+++
T Consensus       484 ~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~-~~~~~p~~y~~~G~~~v~  536 (677)
T 1kb0_A          484 LTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT-GVVAAPSTYMVDGRQYVS  536 (677)
T ss_dssp             EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS-CCCSCCEEEEETTEEEEE
T ss_pred             eEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC-CcccCCEEEEeCCEEEEE
Confidence            77788899999999999999999999998886533 2333456665 6654443

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.47  E-value=8.3e-12  Score=131.37  Aligned_cols=243  Identities=6%  Similarity=-0.020  Sum_probs=158.6

Q ss_pred             CCeEEEeeCCCCCeEEEec--C----CeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCC-----------
Q psy15995         45 GQPIVLGGDPKGKNFLYTN--G----NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISG-----------  107 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~--~----~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg-----------  107 (683)
                      ..+..++|||||++||++.  +    ..|++||+++++.+.. ..+......++|+ ||+.|+.++.+.           
T Consensus       129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~  206 (693)
T 3iuj_A          129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTD  206 (693)
T ss_dssp             CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred             EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence            3466778999999999873  2    3799999999986542 1111123678999 999998887664           


Q ss_pred             --CEEEEeCCCccc----cccccc-ccCCCCcccceeeeeecceeeeEeeccceEEEeec----CCccEEEEecccccee
Q psy15995        108 --KVRIWDTVNKEH----ILKNEF-HPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD----ISGKVRIWDTVNKEHI  176 (683)
Q Consensus       108 --~i~iwd~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----~d~~i~iwd~~~~~~~  176 (683)
                        .|++|++.++..    +..... ++              .....+.++|||++|+...    .++.|.++|+.++...
T Consensus       207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~--------------~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~  272 (693)
T 3iuj_A          207 QHKVYFHRLGTAQEDDRLVFGAIPAQH--------------HRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAP  272 (693)
T ss_dssp             CCEEEEEETTSCGGGCEEEESCSGGGC--------------CSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCC
T ss_pred             CcEEEEEECCCCcccceEEEecCCCCC--------------eEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCc
Confidence              399999987642    221111 11              2356788999999886543    2358999999876421


Q ss_pred             eeccccccCCCeeEEEEcCCCCeEEEEecCC--ceEEEEEEccCCCc--eeeeecCCcCeEEEEeecCCCeEEEEeeCCC
Q psy15995        177 LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR--ERFGHVFMSETGTS--VGEISGQSKPINSCDFKPSRPFRIITGSEDN  252 (683)
Q Consensus       177 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~  252 (683)
                      .. .+..+....... +++++..+++.+...  ...+..++.+++..  ...+..|...+.  .|+++++.++++...++
T Consensus       273 ~~-~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g  348 (693)
T 3iuj_A          273 LL-TVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDA  348 (693)
T ss_dssp             CE-EEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETT
T ss_pred             eE-EEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECC
Confidence            11 122223344444 778888887776543  23355566666543  345666766665  89999987555555565


Q ss_pred             --eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCC----CcEEEEeCCCCeeE
Q psy15995        253 --TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD----GKVFLYDGASADLV  307 (683)
Q Consensus       253 --~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iw~~~~~~~~  307 (683)
                        .|++|+...+............+..+.++++++.++....+    +.++.||+.+++..
T Consensus       349 ~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~  409 (693)
T 3iuj_A          349 TARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAIS  409 (693)
T ss_dssp             EEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred             eeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEE
Confidence              68889887554333222344567788888888866655444    78999998877643

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.46  E-value=1.9e-10  Score=111.81  Aligned_cols=305  Identities=11%  Similarity=0.080  Sum_probs=194.1

Q ss_pred             cceEEEeecCCccEEEEeccccceeeecccccc-------CCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceee
Q psy15995        152 IGFYIASGDISGKVRIWDTVNKEHILKNEFHPI-------GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGE  224 (683)
Q Consensus       152 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  224 (683)
                      ++..+.+++.++.|..+|..+++.+........       ...+.+. ...++..+++++.+.  .+..++.++|+.+..
T Consensus        52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g--~l~a~d~~tG~~~W~  128 (376)
T 3q7m_A           52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKA--QVYALNTSDGTVAWQ  128 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTS--EEEEEETTTCCEEEE
T ss_pred             ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCC--EEEEEECCCCCEEEE
Confidence            355677778889999999999998777665321       1222222 222345666665543  267777788888776


Q ss_pred             eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCe-----EEEEECCCCCEEEEEcCCCcEEEE
Q psy15995        225 ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFV-----QAVRYSPSGSHFASAGFDGKVFLY  299 (683)
Q Consensus       225 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~dg~i~iw  299 (683)
                      .............. ++  .++.++.++.+..+|..+++.+..........     ......  +..+++++.++.+..+
T Consensus       129 ~~~~~~~~~~p~~~-~~--~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~  203 (376)
T 3q7m_A          129 TKVAGEALSRPVVS-DG--LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAV  203 (376)
T ss_dssp             EECSSCCCSCCEEE-TT--EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEE
T ss_pred             EeCCCceEcCCEEE-CC--EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEE
Confidence            66543322222332 33  48888899999999999998877665332111     111222  3467788889999999


Q ss_pred             eCCCCeeEEeccCCccccC-----eEEEEEcc--CCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCC
Q psy15995        300 DGASADLVSELGNPAHKGG-----VYAVAWKP--DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD  372 (683)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~-----i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (683)
                      |..+++.+...........     +..+.-.|  .+..++.++.++.+..+|..+++.+.......     .......+.
T Consensus       204 d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-----~~~~~~~~~  278 (376)
T 3q7m_A          204 LMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS-----VNDFIVDGN  278 (376)
T ss_dssp             ETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC-----EEEEEEETT
T ss_pred             ECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC-----CCCceEECC
Confidence            9999988776653211100     00011111  25678888889999999999998876654322     123344688


Q ss_pred             EEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEE
Q psy15995        373 YLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK  452 (683)
Q Consensus       373 ~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~  452 (683)
                      .+++++.++.+..+|..++......-......+.....  .+..|+.++.+|.|..+|..+++.................
T Consensus       279 ~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~  356 (376)
T 3q7m_A          279 RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPV  356 (376)
T ss_dssp             EEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCE
T ss_pred             EEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCE
Confidence            89999999999999998755432221111222222333  2468888999999999999999877655432222333344


Q ss_pred             EeCCeEEEEEcCCeEEEEe
Q psy15995        453 ATGELLYTCGIDDTIKQVD  471 (683)
Q Consensus       453 ~~~~~l~~~~~d~~i~~~~  471 (683)
                      ..++.|+.++.+|.+..|+
T Consensus       357 ~~~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          357 AADGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             EETTEEEEEBTTSCEEEEE
T ss_pred             EECCEEEEEeCCCEEEEEe
Confidence            4588999999999999886

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.46  E-value=1.2e-10  Score=110.04  Aligned_cols=228  Identities=13%  Similarity=0.085  Sum_probs=151.5

Q ss_pred             eEEEEECCCC-cEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEE
Q psy15995         88 VNVAKYSPSG-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVR  166 (683)
Q Consensus        88 v~~~~~s~d~-~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~  166 (683)
                      ..+.+|+|++ .++++...++.|..||..+++.. .+.. +              ..+.+++++++|+++++. .+ .|.
T Consensus        51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~-~--------------~~v~~i~~~~dg~l~v~~-~~-gl~  112 (326)
T 2ghs_A           51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHAL-P--------------FMGSALAKISDSKQLIAS-DD-GLF  112 (326)
T ss_dssp             EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC-S--------------SCEEEEEEEETTEEEEEE-TT-EEE
T ss_pred             CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEC-C--------------CcceEEEEeCCCeEEEEE-CC-CEE
Confidence            4577899974 55666667889999999876432 1111 1              457888999999987765 33 499


Q ss_pred             EEeccccceeeeccccc--cCCCeeEEEEcCCCCeEEEEecCC--ceEEEEEEccCCCceeeeecCCcCeEEEEeecCCC
Q psy15995        167 IWDTVNKEHILKNEFHP--IGGPIKDIAWSPDNQRMVVVGEGR--ERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRP  242 (683)
Q Consensus       167 iwd~~~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  242 (683)
                      +||..+++.........  ....+.+++++|+|+..+......  .....+|.++.++ ...+..+......++|+|+++
T Consensus       113 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~-~~~~~~~~~~~~~i~~s~dg~  191 (326)
T 2ghs_A          113 LRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK-VTKLFADISIPNSICFSPDGT  191 (326)
T ss_dssp             EEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE-EEEEEEEESSEEEEEECTTSC
T ss_pred             EEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCc-EEEeeCCCcccCCeEEcCCCC
Confidence            99998876432222111  124688999999998665443210  0113444444333 333333445678999999998


Q ss_pred             eEEEEeeCCCeEEEEcCC--CC-ce-----eeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCc
Q psy15995        243 FRIITGSEDNTIAVFEGP--PF-KF-----KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPA  314 (683)
Q Consensus       243 ~~l~~~~~d~~i~iw~~~--~~-~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~  314 (683)
                      .++++.+.++.|.+|+..  ++ +.     ...+......+..+++.++|++.++...++.|.+|+. +++.+..+..  
T Consensus       192 ~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~--  268 (326)
T 2ghs_A          192 TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV--  268 (326)
T ss_dssp             EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC--
T ss_pred             EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC--
Confidence            655666678899999975  55 31     2222233456788999999987776666788999997 5777666654  


Q ss_pred             cccCeEEEEEc-cCCCEEEEEECC
Q psy15995        315 HKGGVYAVAWK-PDGTQLLTASGD  337 (683)
Q Consensus       315 ~~~~i~~~~~~-~~~~~l~~~~~d  337 (683)
                      +...+.+++|. ++++.|++++..
T Consensus       269 ~~~~~~~~af~g~d~~~L~vt~~~  292 (326)
T 2ghs_A          269 PGKQTTCPAFIGPDASRLLVTSAR  292 (326)
T ss_dssp             SCSBEEEEEEESTTSCEEEEEEBC
T ss_pred             CCCCcEEEEEecCCCCEEEEEecC
Confidence            45579999998 888877666544

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.46  E-value=4.7e-11  Score=111.45  Aligned_cols=228  Identities=11%  Similarity=0.052  Sum_probs=151.5

Q ss_pred             eEEEeeCCCCCeEEEe--cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccc
Q psy15995         47 PIVLGGDPKGKNFLYT--NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNE  124 (683)
Q Consensus        47 ~~~~~~s~~~~~l~~~--~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~  124 (683)
                      .-...|+|+++.|.+.  .++.|..||.++++.. .+. ....+.+++++++|+++++.  ++.|.+||..+++......
T Consensus        15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~   90 (297)
T 3g4e_A           15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLAT   90 (297)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred             ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEe
Confidence            3466789977766665  4689999999887653 232 45689999999999966654  4579999998775432211


Q ss_pred             cccCCCCcccceeeeeecceeeeEeeccceEEEeecC---------CccEEEEeccccceeeeccccccCCCeeEEEEcC
Q psy15995        125 FHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI---------SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSP  195 (683)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~  195 (683)
                      ... +.         ....+..+++.|+|+++++...         ...-.+|.+........  ..........++|+|
T Consensus        91 ~~~-~~---------~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~--~~~~~~~pngi~~sp  158 (297)
T 3g4e_A           91 VDN-DK---------KNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK--YFDQVDISNGLDWSL  158 (297)
T ss_dssp             CCT-TC---------SSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE--EEEEESBEEEEEECT
T ss_pred             cCC-CC---------CCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE--EeeccccccceEEcC
Confidence            110 00         1145788999999997765422         12334554443211111  112224568899999


Q ss_pred             CCCeEEEEecCCceEEEEEEc--cCCCc-----eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeec
Q psy15995        196 DNQRMVVVGEGRERFGHVFMS--ETGTS-----VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK  268 (683)
Q Consensus       196 ~~~~l~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~  268 (683)
                      |++.++++...... +..++.  .++..     ...+..+......+++.+++.. .++...++.|..||..+++.+..+
T Consensus       159 dg~~lyv~~~~~~~-i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~l-wva~~~~~~v~~~d~~tG~~~~~i  236 (297)
T 3g4e_A          159 DHKIFYYIDSLSYS-VDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKL-WVACYNGGRVIRLDPVTGKRLQTV  236 (297)
T ss_dssp             TSCEEEEEEGGGTE-EEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCE-EEEEETTTEEEEECTTTCCEEEEE
T ss_pred             CCCEEEEecCCCCc-EEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCE-EEEEcCCCEEEEEcCCCceEEEEE
Confidence            99988877654433 455655  34432     2223334456789999999973 666667788999999889988888


Q ss_pred             cccccCeEEEEEC-CCCCEEEEEcC
Q psy15995        269 QEHSRFVQAVRYS-PSGSHFASAGF  292 (683)
Q Consensus       269 ~~~~~~v~~~~~~-~~~~~l~~~~~  292 (683)
                      ..+...+++++|. |+++.|++++.
T Consensus       237 ~~p~~~~t~~~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          237 KLPVDKTTSCCFGGKNYSEMYVTCA  261 (297)
T ss_dssp             ECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred             ECCCCCceEEEEeCCCCCEEEEEcC
Confidence            8777789999998 88887766554

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.44  E-value=1.3e-11  Score=117.74  Aligned_cols=273  Identities=15%  Similarity=0.103  Sum_probs=169.7

Q ss_pred             cCeEEEEECCCCCEEEEEcC--CCcEEEEeCCCCeeEEecc-----CCccccCeEEEEEccCCCEEEEEEC-----CCcE
Q psy15995        273 RFVQAVRYSPSGSHFASAGF--DGKVFLYDGASADLVSELG-----NPAHKGGVYAVAWKPDGTQLLTASG-----DKTC  340 (683)
Q Consensus       273 ~~v~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~l~~~~~-----dg~i  340 (683)
                      ..+..++++++|+.+++...  ++.+++|.+.+++.. .+.     ...+...+..++++++++++++-..     ++.|
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i   95 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL   95 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence            67899999999998888642  342445544455433 221     1124568999999999876555433     4789


Q ss_pred             EEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEE-E
Q psy15995        341 KLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVF-T  419 (683)
Q Consensus       341 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~  419 (683)
                      .+||+.+++.+..+.....                                      ...+...+..+++++++..++ +
T Consensus        96 ~~~d~~tg~~~~~~~~~~~--------------------------------------~~~~~~~~~~v~vd~~~g~~yvt  137 (343)
T 2qe8_A           96 VAWDTLNNQLSRVIYLPPP--------------------------------------ITLSNSFVNDLAVDLIHNFVYIS  137 (343)
T ss_dssp             EEEETTTTEEEEEEECCTT--------------------------------------TSCTTCCCCEEEEETTTTEEEEE
T ss_pred             EEEECCCCeEEEEEECChh--------------------------------------hcccccccceEEEecCCCEEEEE
Confidence            9999998876655432110                                      011234567889998655554 4


Q ss_pred             Ee---CCCcEEEEcCCCCCcceeccCCCCcce---eEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeee
Q psy15995        420 GS---HDGFITRWNAKTGENDRVQGAGHGNQI---NGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDI  493 (683)
Q Consensus       420 ~~---~dg~i~~w~~~~~~~~~~~~~~~~~~v---~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (683)
                      -.   .++.|.+||+.+++..+... .|....   ..+...+..+.+...++.++.|..                     
T Consensus       138 d~~~~~~~~i~v~d~~~g~~~r~~~-~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~---------------------  195 (343)
T 2qe8_A          138 DPAPDDKAALIRVDLQTGLAARVLQ-GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHL---------------------  195 (343)
T ss_dssp             ECCSGGGCEEEEEETTTCCEEEECT-TCTTTSCCSCCCEETTEECBEECTTSCEECCCC---------------------
T ss_pred             cCccCCCCeEEEEECCCCCEEEEec-CCCcccccccceeECCEEEEeccCCCceeceec---------------------
Confidence            44   57899999998887655442 211100   122233444444555555544321                     


Q ss_pred             cCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCC-cEEEEEcC---CCcc-----Ccc-eeecC
Q psy15995        494 DENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADS-KVHIYELN---NKSL-----SPK-AELDH  563 (683)
Q Consensus       494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~---~~~~-----~~~-~~~~~  563 (683)
                                                   .+..++++|+++.|+++..++ .+..++..   .+..     ... ...++
T Consensus       196 -----------------------------~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~  246 (343)
T 2qe8_A          196 -----------------------------GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSE  246 (343)
T ss_dssp             -----------------------------CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE
T ss_pred             -----------------------------ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEeccc
Confidence                                         246799999999888887665 45555432   1110     001 11123


Q ss_pred             CcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEe
Q psy15995        564 LGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWS  636 (683)
Q Consensus       564 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~  636 (683)
                      ......++++++|.++++...++.|.+||..+++........ +...+.+++|.++++++++.+..+.+.+|.
T Consensus       247 ~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~-~~~~p~~va~~~~g~l~v~~~~~~~~~~f~  318 (343)
T 2qe8_A          247 KPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE-KLSWTDSFNFGSDGYLYFDCNQLHHSAPLN  318 (343)
T ss_dssp             CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG-GGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred             CCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC-ceecCCeeEECCCCcEEEEeCccccccccc
Confidence            445678999999999999889999999998566543222111 245689999999999888877666554444

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.44  E-value=3.4e-11  Score=114.89  Aligned_cols=321  Identities=12%  Similarity=0.030  Sum_probs=196.9

Q ss_pred             eCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEee
Q psy15995         71 NIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVL  150 (683)
Q Consensus        71 ~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  150 (683)
                      |.++++..-.+..+.....++.+..+|. |..++.++.|..|| .+++.+.......              ..+..+...
T Consensus         5 ~~~~g~~~W~~~~~~~~~~~~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~~~~~--------------~~~~~~~~~   68 (330)
T 3hxj_A            5 GVNDCKIKWEFLIGNSIDSSPILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFFKSGE--------------IIECRPSIG   68 (330)
T ss_dssp             -------CCTTTSCEEECCCCEECTTSC-EECSSTTTTTEEEC-TTSCEEESSCGGG--------------EEEECCEET
T ss_pred             ccCCceEEEEEeCCCCcccCceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEEecCC--------------CcccceEEe
Confidence            3344444444444444445566666764 55667788899999 8887665544321              345666777


Q ss_pred             ccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCc
Q psy15995        151 SIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSK  230 (683)
Q Consensus       151 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (683)
                      ++|...+ ++.+  |..+|. +++.+.......  .......+.  +..+.+++.+..  +..++.+ ++.......+..
T Consensus        69 ~~g~l~v-~t~~--l~~~d~-~g~~~~~~~~~~--~~~~~~~~~--~~~l~v~t~~~~--l~~~d~~-g~~~~~~~~~~~  137 (330)
T 3hxj_A           69 KDGTIYF-GSDK--VYAINP-DGTEKWRFDTKK--AIVSDFTIF--EDILYVTSMDGH--LYAINTD-GTEKWRFKTKKA  137 (330)
T ss_dssp             TTTEECC-SSCE--EEEECC-CGGGGGGSCC-------CCEEEE--TTEEEEECTTSE--EEEECTT-SCEEEEEECSSC
T ss_pred             cCCcEEE-ecCc--EEEECC-CCcEEEEEECCC--CcccCceEE--CCEEEEEecCCE--EEEEcCC-CCEEEEEcCCCc
Confidence            7776444 4444  888886 555544433322  222333333  445555554432  4555555 676666666666


Q ss_pred             CeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEec
Q psy15995        231 PINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL  310 (683)
Q Consensus       231 ~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~  310 (683)
                      .+.++...+++.  +..++.++.+..+|.. ++...........+.++...+++.. ..++  +.+..+| .+++.....
T Consensus       138 ~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l-~v~t--~~l~~~d-~~g~~~~~~  210 (330)
T 3hxj_A          138 IYATPIVSEDGT--IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTI-YFGS--DKVYAIN-PDGTEKWNF  210 (330)
T ss_dssp             CCSCCEECTTSC--EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCE-EEES--SSEEEEC-TTSCEEEEE
T ss_pred             eeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEE-EEEe--CEEEEEC-CCCcEEEEE
Confidence            677777777775  7778888999999988 7776666555566777888788874 4455  7899999 777776666


Q ss_pred             cCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCC
Q psy15995        311 GNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN  390 (683)
Q Consensus       311 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~  390 (683)
                      ..  ....+.++...+++. +..++.++.+..+|. +++....+....... ..... ..+..+.+++.+|.+..+|. .
T Consensus       211 ~~--~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~-~~~~~-~~~g~l~v~t~~ggl~~~d~-~  283 (330)
T 3hxj_A          211 YA--GYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIE-SSPVI-GNTDTIYFGSYDGHLYAINP-D  283 (330)
T ss_dssp             CC--SSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCC-SCCEE-CTTSCEEEECTTCEEEEECT-T
T ss_pred             cc--CCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCcc-ccceE-cCCCeEEEecCCCCEEEECC-C
Confidence            53  445677888887775 666677788888874 555555554433221 12222 23567888899989999985 3


Q ss_pred             CCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC
Q psy15995        391 PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG  434 (683)
Q Consensus       391 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~  434 (683)
                       .+....+......+.++...+++. |..++.+|.+++...+..
T Consensus       284 -g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~  325 (330)
T 3hxj_A          284 -GTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEH  325 (330)
T ss_dssp             -SCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC---
T ss_pred             -CcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecccc
Confidence             333344443445566777767765 566888999998876543

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.44  E-value=1.8e-10  Score=111.93  Aligned_cols=302  Identities=11%  Similarity=0.094  Sum_probs=189.5

Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeecccc---------ccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCc
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTKQEH---------SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPA  314 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~  314 (683)
                      .+++++.++.|..+|..+++.+......         ...+.+. ...++..+++++.++.|..+|.++++.+.......
T Consensus        55 ~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~  133 (376)
T 3q7m_A           55 VVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG  133 (376)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred             EEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC
Confidence            4788888899999999999887655432         1223222 22245578888889999999999999887665421


Q ss_pred             cccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceec--eEEEEecCCEEEEEecCCcEEEEecCCCC
Q psy15995        315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQ--QVSCLWQGDYLLTVSLSGFISYLDVNNPS  392 (683)
Q Consensus       315 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~g~i~~~~~~~~~  392 (683)
                        .........  +..+++++.++.+..+|..+++.+..+.........  .......+..++++..++.+..+|..++.
T Consensus       134 --~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~  209 (376)
T 3q7m_A          134 --EALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQ  209 (376)
T ss_dssp             --CCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEETTTCC
T ss_pred             --ceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCc
Confidence              111111222  457888888999999999999988777654322100  01111236778888889999999998754


Q ss_pred             cceeeeeeccc------cEEEEEEeC--CCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcC
Q psy15995        393 TPIRVIKGHNK------PITALALSP--DRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGID  464 (683)
Q Consensus       393 ~~~~~~~~~~~------~v~~~~~~~--~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d  464 (683)
                      ..-........      .+..+...|  .+..++.++.++.+..+|..+++.......   .....+...++.++.++.+
T Consensus       210 ~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~---~~~~~~~~~~~~l~~~~~~  286 (376)
T 3q7m_A          210 MIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL---GSVNDFIVDGNRIYLVDQN  286 (376)
T ss_dssp             EEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC---CCEEEEEEETTEEEEEETT
T ss_pred             EEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC---CCCCCceEECCEEEEEcCC
Confidence            43222111000      000010111  346778888899999999999987655432   2344566678999999999


Q ss_pred             CeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCc
Q psy15995        465 DTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSK  544 (683)
Q Consensus       465 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~  544 (683)
                      +.+..+|..+++........                                   .........+  .+..|++++.+|.
T Consensus       287 g~l~~~d~~tG~~~w~~~~~-----------------------------------~~~~~~~~~~--~~~~l~v~~~~g~  329 (376)
T 3q7m_A          287 DRVMALTIDGGVTLWTQSDL-----------------------------------LHRLLTSPVL--YNGNLVVGDSEGY  329 (376)
T ss_dssp             CCEEEEETTTCCEEEEECTT-----------------------------------TTSCCCCCEE--ETTEEEEECTTSE
T ss_pred             CeEEEEECCCCcEEEeeccc-----------------------------------CCCcccCCEE--ECCEEEEEeCCCe
Confidence            99999998876431110000                                   0001111222  2467888899999


Q ss_pred             EEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEE
Q psy15995        545 VHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYR  592 (683)
Q Consensus       545 i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~  592 (683)
                      +..+|..+++..................  .+..|+.++.+|.+..|+
T Consensus       330 l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          330 LHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             EEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred             EEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence            9999999998765554422211122222  255778888899999887

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.43  E-value=1.1e-11  Score=116.95  Aligned_cols=261  Identities=10%  Similarity=-0.006  Sum_probs=173.1

Q ss_pred             CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec----------CCccEEEEeccccceee
Q psy15995        108 KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD----------ISGKVRIWDTVNKEHIL  177 (683)
Q Consensus       108 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----------~d~~i~iwd~~~~~~~~  177 (683)
                      +|.+.|..+++.+.++....              .+  .+.++||++++.++.          .++.|.+||+.+++.+.
T Consensus        47 ~vsvID~~t~~v~~~i~vG~--------------~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~  110 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAF--------------LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA  110 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECT--------------TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred             eEEEEECCCCeEEEEEeCCC--------------CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence            78899999998887776553              33  799999999888875          47899999999998876


Q ss_pred             ecccccc-----CCCeeEEEEcCCCCeEEEEecCCceEEEE--EEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeC
Q psy15995        178 KNEFHPI-----GGPIKDIAWSPDNQRMVVVGEGRERFGHV--FMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSE  250 (683)
Q Consensus       178 ~~~~~~~-----~~~i~~~~~s~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  250 (683)
                      .......     ......++|+|||++++++.......+.+  ++..+   +.++.... .   ..+.|+++..+++.+.
T Consensus       111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~-~---~~~~p~g~~~~~~~~~  183 (368)
T 1mda_H          111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS-C---FHIHPGAAATHYLGSC  183 (368)
T ss_dssp             EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS-C---CCCEEEETTEEECCCC
T ss_pred             EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC-c---eEEccCCCeEEEEEcC
Confidence            6654311     13467899999999999987543333445  44444   44443211 1   2245666555677778


Q ss_pred             CCeEEEEcCCC-----Cceee----eccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCe--eEEeccCCc-----
Q psy15995        251 DNTIAVFEGPP-----FKFKM----TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASAD--LVSELGNPA-----  314 (683)
Q Consensus       251 d~~i~iw~~~~-----~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~-----  314 (683)
                      |+.+.+.+..+     ++...    .+.....+.   . .+++..++..+. +.+.+.|..+..  .+..+....     
T Consensus       184 dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~  258 (368)
T 1mda_H          184 PASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKA  258 (368)
T ss_dssp             TTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHH
T ss_pred             CCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccc
Confidence            88888888876     43321    111112233   3 566666666666 999999986542  333322110     


Q ss_pred             ---cccCeEEEEEccCCCEEEEEEC-C--------CcEEEEECCCCceeeEEEecCcceeceEEEEecCCE-EEEEe-cC
Q psy15995        315 ---HKGGVYAVAWKPDGTQLLTASG-D--------KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDY-LLTVS-LS  380 (683)
Q Consensus       315 ---~~~~i~~~~~~~~~~~l~~~~~-d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~-~~  380 (683)
                         .......++++|++++++++.. .        +.+.++|+.+++.+.++..+.  ....+.+++++++ +++.. .+
T Consensus       259 ~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~--~p~gi~~s~Dg~~l~va~~~~~  336 (368)
T 1mda_H          259 DNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH--DSDAIIAAQDGASDNYANSAGT  336 (368)
T ss_dssp             TTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE--EECEEEECCSSSCEEEEEETTT
T ss_pred             cccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC--CcceEEECCCCCEEEEEccCCC
Confidence               1111222689999998887643 2        356799999999988887655  5778889999985 45555 48


Q ss_pred             CcEEEEecCCCCcceeeee
Q psy15995        381 GFISYLDVNNPSTPIRVIK  399 (683)
Q Consensus       381 g~i~~~~~~~~~~~~~~~~  399 (683)
                      +.+.++|..+ .+.+..+.
T Consensus       337 ~~VsVID~~t-~kvv~~I~  354 (368)
T 1mda_H          337 EVLDIYDAAS-DQDQSSVE  354 (368)
T ss_dssp             TEEEEEESSS-CEEEEECC
T ss_pred             CeEEEEECCC-CcEEEEEE
Confidence            9999999988 44444444

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.43  E-value=2.5e-12  Score=121.35  Aligned_cols=173  Identities=9%  Similarity=0.016  Sum_probs=121.3

Q ss_pred             CCeEEEeeCCCCCeEEEecCCeEEEEeCCCCc---------ccc-cccCcccceEEEEECCCCcEEEEecCCCCEEEEeC
Q psy15995         45 GQPIVLGGDPKGKNFLYTNGNSVIIRNIENPA---------ISD-IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDT  114 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~---------~~~-~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~  114 (683)
                      ..+..+++++..++++++....+++|++++.+         ... ....+.. |++++|  |+++|+++ .++.|++||+
T Consensus        38 ~~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv  113 (388)
T 1xip_A           38 ASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL  113 (388)
T ss_dssp             SCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred             ccccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence            46788999999999999988899999976543         111 2234566 999999  99999999 8899999999


Q ss_pred             CCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEc
Q psy15995        115 VNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWS  194 (683)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s  194 (683)
                      .+.........+.              ..+..+.+.+..  +|+++.||.|.+||+.++....      +...       
T Consensus       114 ~sl~~~~~~~~~~--------------~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~------~~~~-------  164 (388)
T 1xip_A          114 EELSEFRTVTSFE--------------KPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ------LAQN-------  164 (388)
T ss_dssp             SSTTCEEEEEECS--------------SCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE------EEES-------
T ss_pred             hhhhccCccceee--------------cceeeEEecCCC--EEEEECCCCEEEEEccCCcccc------ccCC-------
Confidence            8765433332222              223444444432  8888899999999998765321      1123       


Q ss_pred             CCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce--eeec----
Q psy15995        195 PDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF--KMTK----  268 (683)
Q Consensus       195 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~----  268 (683)
                                                           |++++|+|+|   ++.|..||++++|+....+.  ...+    
T Consensus       165 -------------------------------------Vs~v~WSpkG---~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp  204 (388)
T 1xip_A          165 -------------------------------------VTSFDVTNSQ---LAVLLKDRSFQSFAWRNGEMEKQFEFSLPS  204 (388)
T ss_dssp             -------------------------------------EEEEEECSSE---EEEEETTSCEEEEEEETTEEEEEEEECCCH
T ss_pred             -------------------------------------ceEEEEcCCc---eEEEEcCCcEEEEcCCCccccccceecCCc
Confidence                                                 4555555555   45677788888887766664  4444    


Q ss_pred             --c---ccccCeEEEEECCCCCEEEEE
Q psy15995        269 --Q---EHSRFVQAVRYSPSGSHFASA  290 (683)
Q Consensus       269 --~---~~~~~v~~~~~~~~~~~l~~~  290 (683)
                        .   +|...|.++.|.+++.++++=
T Consensus       205 ~~~~~~~~~~~V~sI~wl~~~~flv~y  231 (388)
T 1xip_A          205 ELEELPVEEYSPLSVTILSPQDFLAVF  231 (388)
T ss_dssp             HHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             ccccccCCCeeEEEEEEecCCeEEEEE
Confidence              2   367889999999999877753

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=99.43  E-value=3.3e-07  Score=93.79  Aligned_cols=525  Identities=9%  Similarity=-0.001  Sum_probs=285.5

Q ss_pred             CCeEEEecCCeEEEEeCCCCccccccc-CcccceEEEEECCCCcEEE-EecCCCCEEEEeCCCcccccccccccCCCCcc
Q psy15995         56 GKNFLYTNGNSVIIRNIENPAISDIYT-EHSCAVNVAKYSPSGFYIA-SGDISGKVRIWDTVNKEHILKNEFHPIGGPIK  133 (683)
Q Consensus        56 ~~~l~~~~~~~i~v~~~~~~~~~~~~~-~h~~~v~~~~~s~d~~~la-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  133 (683)
                      ..+|.++..+.|...++++......+. ..-..+..++|++++..|. +-..++.|..+++........+...       
T Consensus         6 ~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g-------   78 (628)
T 4a0p_A            6 EAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFG-------   78 (628)
T ss_dssp             CCEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-------
T ss_pred             CcEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCC-------
Confidence            457888889999999998765433322 2345678999999665554 4456788999988654221111110       


Q ss_pred             cceeeeeecceeeeEeeccce-EEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEE
Q psy15995        134 DIGTLLSLTSIRNILVLSIGF-YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH  212 (683)
Q Consensus       134 ~~~~~~~~~~i~~~~~s~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~  212 (683)
                             ......+++.+.+. ..++-...+.|.+.++........  ....-.....+++.|....|+.+..+....+.
T Consensus        79 -------~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l--~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~  149 (628)
T 4a0p_A           79 -------LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVL--VWKDLDSPRALALDPAEGFMYWTEWGGKPKID  149 (628)
T ss_dssp             -------CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEE--ECSSCCCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred             -------CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEE--EeCCCCCcccEEEccCCCeEEEeCCCCCCEEE
Confidence                   13456788886544 445555678899999876432111  11223567899999977777777644222234


Q ss_pred             EEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC
Q psy15995        213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF  292 (683)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  292 (683)
                      ....+ |.....+...-...+.+++++++..+.++-...+.|...++..... ..+.........+++.. +..+++-..
T Consensus       150 r~~~d-G~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~  226 (628)
T 4a0p_A          150 RAAMD-GSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWS  226 (628)
T ss_dssp             EEETT-SCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETT
T ss_pred             EEeCC-CCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCC
Confidence            44443 3333344445567889999998776566667778999999765443 23333334456777765 444445455


Q ss_pred             CCcEEEEeCCCCeeEEeccCCccccCeEEEEE-ccCCCEEEE-EE----CCCcEEEEECCCCceeeEEEecCcceeceEE
Q psy15995        293 DGKVFLYDGASADLVSELGNPAHKGGVYAVAW-KPDGTQLLT-AS----GDKTCKLWDIETKSVVSEFIMGNQVEDQQVS  366 (683)
Q Consensus       293 dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~~-~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  366 (683)
                      .+.|...|..+++....+..  .......+.. ++..+.-.- |.    .-..+.+-... +........+.........
T Consensus       227 ~~~I~~~dk~tg~~~~~l~~--~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~-~~~~C~C~~g~~l~~d~~~  303 (628)
T 4a0p_A          227 RRSIERANKTSGQNRTIIQG--HLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPV-GGFVCGCPAHYSLNADNRT  303 (628)
T ss_dssp             TTEEEEEETTTCCSCEEEEC--SCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETT-TEEEEECSTTCEECTTSSC
T ss_pred             CCEEEEEECCCCCceEEEec--CCCCcceeeeeeecccccceEeccCCCCcchhhhcCCC-CCeeEEcCCCcEecccCCc
Confidence            78899999777765544432  1122333322 221110000 00    00012221110 0000000000000000111


Q ss_pred             EEecCCEEEEEecCCcEEEEecCCCCcceeeee-eccccEEEEEEeCCCCEEEEEe-CCCcEEEEcCCCCCcceeccC--
Q psy15995        367 CLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIK-GHNKPITALALSPDRGTVFTGS-HDGFITRWNAKTGENDRVQGA--  442 (683)
Q Consensus       367 ~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~w~~~~~~~~~~~~~--  442 (683)
                      |.+...+++.+ ....|+-..+.........+. ..-..+.+++|.+..+.|+.+. ..+.|+.+++...........  
T Consensus       304 C~~~~~~Ll~s-~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~  382 (628)
T 4a0p_A          304 CSAPTTFLLFS-QKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSV  382 (628)
T ss_dssp             EECCSSEEEEE-ETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC---
T ss_pred             Cccccceeeee-ccceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEccc
Confidence            22223444443 345666665543222111121 1235588899999777776654 467788888765443333321  


Q ss_pred             ---CCCcceeEEEEe--CC-eEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceee
Q psy15995        443 ---GHGNQINGMKAT--GE-LLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVS  516 (683)
Q Consensus       443 ---~~~~~v~~~~~~--~~-~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  516 (683)
                         ........++++  ++ +.++-+..+.|.+.++.....                                    ...
T Consensus       383 ~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~------------------------------------~~l  426 (628)
T 4a0p_A          383 PSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSV------------------------------------GVV  426 (628)
T ss_dssp             -----CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEE------------------------------------EEE
T ss_pred             ccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeE------------------------------------EEE
Confidence               123356677776  44 445555677888888764311                                    000


Q ss_pred             eecCCCCCcEEEEccCCCEEEEEcC-CC--cEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeC-CCeEEEEE
Q psy15995        517 SLPIDYEPSSISLDHEHGLVAVGGA-DS--KVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDA-HRKVVLYR  592 (683)
Q Consensus       517 ~~~~~~~~~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~i~~  592 (683)
                      .......+..+++.|...+|..... ..  .|...+++..... ......-...+.++++++++.|..++. .+.|...+
T Consensus       427 ~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~-~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~  505 (628)
T 4a0p_A          427 LKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTERE-VLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSD  505 (628)
T ss_dssp             EECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCE-EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             EeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcE-EEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEe
Confidence            0011235789999995555554432 22  5777777654432 122223456789999998888877754 57899999


Q ss_pred             CCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCcee
Q psy15995        593 VPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKH  643 (683)
Q Consensus       593 ~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~  643 (683)
                      +...... .... .......+|+... +.+..+-.....|...|..+++..
T Consensus       506 ~dG~~r~-~~~~-~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~~  553 (628)
T 4a0p_A          506 LSGANRI-VLED-SNILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREGR  553 (628)
T ss_dssp             TTSCSCE-EEEC-SSCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSCC
T ss_pred             CCCCceE-EEEc-CCCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCCc
Confidence            8654322 1111 1233456777654 444444445567777777665543

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.42  E-value=2.7e-11  Score=115.58  Aligned_cols=272  Identities=11%  Similarity=0.041  Sum_probs=165.0

Q ss_pred             CCeEEEeeCCCCCeEEEec---CCeEEEEeCCCCccc------ccccCcccceEEEEECCCCcEEEEecC-----CCCEE
Q psy15995         45 GQPIVLGGDPKGKNFLYTN---GNSVIIRNIENPAIS------DIYTEHSCAVNVAKYSPSGFYIASGDI-----SGKVR  110 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~---~~~i~v~~~~~~~~~------~~~~~h~~~v~~~~~s~d~~~las~~~-----dg~i~  110 (683)
                      ..+..++++|+|+++++..   ++.+.||.+.+++..      ....+|-..+..++++++|+++++-..     ++.|.
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~   96 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV   96 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence            4678899999999988852   342455554455443      112246678999999999987665433     57899


Q ss_pred             EEeCCCcccccccccccCCCCcccceeeeeecceeeeEeecc-ceEEEeec---CCccEEEEeccccceeeeccccccCC
Q psy15995        111 IWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI-GFYIASGD---ISGKVRIWDTVNKEHILKNEFHPIGG  186 (683)
Q Consensus       111 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~  186 (683)
                      +||+.+++.+..+.......        ........+++.++ +...++-.   .++.|.+||+.+++.....  ..+..
T Consensus        97 ~~d~~tg~~~~~~~~~~~~~--------~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~--~~~~~  166 (343)
T 2qe8_A           97 AWDTLNNQLSRVIYLPPPIT--------LSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL--QGYPG  166 (343)
T ss_dssp             EEETTTTEEEEEEECCTTTS--------CTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC--TTCTT
T ss_pred             EEECCCCeEEEEEECChhhc--------ccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe--cCCCc
Confidence            99999988666654432100        01134578899975 45455554   6789999999887643322  11111


Q ss_pred             Ce-eEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCC-eEEEEcCC---C
Q psy15995        187 PI-KDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDN-TIAVFEGP---P  261 (683)
Q Consensus       187 ~i-~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-~i~iw~~~---~  261 (683)
                      .. ....+.++|..+.+...+..  .              ......+..++|+|+++. |+.+..++ .+..++..   .
T Consensus       167 ~~~~~~~~~~~g~~~~~~~~~g~--~--------------~~~~~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~~~~~~  229 (343)
T 2qe8_A          167 IAPEDIDLVIDGVPVQIGQPDGT--V--------------IRPHLGVNGIVLDAENEW-LYLSPMHSTSMYRIKSADLSN  229 (343)
T ss_dssp             TSCCSCCCEETTEECBEECTTSC--E--------------ECCCCCEEEEEECTTSCE-EEEEESSCSEEEEEEHHHHTC
T ss_pred             ccccccceeECCEEEEeccCCCc--e--------------eceecccceeEeccCCCE-EEEEeCCCCeEEEEEHHHhcC
Confidence            00 01334445544433322211  0              001134678999999986 55555444 55555421   1


Q ss_pred             Cc-----eee--eccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEE
Q psy15995        262 FK-----FKM--TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA  334 (683)
Q Consensus       262 ~~-----~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  334 (683)
                      +.     ...  ...++......++++++|.++++...++.|.+||.++++.......+ +...+.+++|.++++++++.
T Consensus       230 ~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~-~~~~p~~va~~~~g~l~v~~  308 (343)
T 2qe8_A          230 LQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE-KLSWTDSFNFGSDGYLYFDC  308 (343)
T ss_dssp             TTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG-GGSCEEEEEECTTSCEEEEE
T ss_pred             CCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC-ceecCCeeEECCCCcEEEEe
Confidence            11     000  11123345667999999998888888999999998567654433321 34568999999998887777


Q ss_pred             ECCCcEEEEE
Q psy15995        335 SGDKTCKLWD  344 (683)
Q Consensus       335 ~~dg~i~iwd  344 (683)
                      +..+.+.+|+
T Consensus       309 ~~~~~~~~f~  318 (343)
T 2qe8_A          309 NQLHHSAPLN  318 (343)
T ss_dssp             CCGGGSGGGB
T ss_pred             Cccccccccc
Confidence            6555444443

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=99.41  E-value=3.6e-07  Score=99.88  Aligned_cols=344  Identities=13%  Similarity=0.154  Sum_probs=194.1

Q ss_pred             CEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEE
Q psy15995        329 TQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITAL  408 (683)
Q Consensus       329 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~  408 (683)
                      ..++-.... .|++.+......+.++.......+...  +-++.+++.+. ++.+.++++..+......-..-...|.|+
T Consensus       484 ~~ivQVt~~-~Irli~~~~~~~~~~w~~p~~~~I~~A--s~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl  559 (1158)
T 3ei3_A          484 QQLIQITSA-SVRLVSQEPKALVSEWKEPQAKNISVA--SCNSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACL  559 (1158)
T ss_dssp             TEEEEEESS-CEEEEESSSCCEEEEECCTTCCCCCEE--EECSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEE
T ss_pred             CeEEEEecC-EEEEEECCCCeEEEEEECCCCCEEEEE--EeCCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEE
Confidence            355555544 478888766556656544333233333  33455666664 67888887765321111112235689999


Q ss_pred             EEeCC------CCEEEEEeC-CCcEEEEcCCCCCcceeccCCCCcceeEEEEe----CCeEEEEEcCCeEEEEeCCC--C
Q psy15995        409 ALSPD------RGTVFTGSH-DGFITRWNAKTGENDRVQGAGHGNQINGMKAT----GELLYTCGIDDTIKQVDLSS--N  475 (683)
Q Consensus       409 ~~~~~------~~~l~~~~~-dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~~~~~~~--~  475 (683)
                      ++.|.      +.+++.|.. |++++++++.+.+.......+......++...    ..+|..+-.||.+..+.+..  +
T Consensus       560 ~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg  639 (1158)
T 3ei3_A          560 DITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETG  639 (1158)
T ss_dssp             ECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTC
T ss_pred             EeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCC
Confidence            98763      468999996 99999999987665544332222233334332    34678888999987666543  2


Q ss_pred             cccCC-ceecCCCCceeeec---CC-eEEEEEeceEEEEeCCceeeeecCCC-CCcEE-EEccC--CCEEEEEcCCCcEE
Q psy15995        476 AYSGP-EVKLGSQPRGLDID---EN-TLVTVTVKQISIVENGAKVSSLPIDY-EPSSI-SLDHE--HGLVAVGGADSKVH  546 (683)
Q Consensus       476 ~~~~~-~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~--~~~l~~~~~dg~i~  546 (683)
                      .+... ...++..+..+..-   .. .+.....+...++.........+... .+..+ .|+..  ..-++..+ ++.++
T Consensus       640 ~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l~~~~v~~~~~F~se~~~~g~v~~~-~~~Lr  718 (1158)
T 3ei3_A          640 LLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALAN-NSTLT  718 (1158)
T ss_dssp             CEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEBSSSCCCEEEEECCSSSTTEEEEEC-SSCEE
T ss_pred             ccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEeccChHHhceEeccCcccCCCcEEEEc-CCceE
Confidence            22221 12344444443211   11 33444445555554333333333322 23333 34322  12333333 45599


Q ss_pred             EEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCC-----------------------------------------
Q psy15995        547 IYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAH-----------------------------------------  585 (683)
Q Consensus       547 i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----------------------------------------  585 (683)
                      |..++..+......++-...+..++++|+.+.++.+..+                                         
T Consensus       719 I~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  798 (1158)
T 3ei3_A          719 IGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET  798 (1158)
T ss_dssp             EEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC---------
T ss_pred             EEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchh
Confidence            998866544334444455678888888877765543311                                         


Q ss_pred             --------CeEEEEECCCCccccccceeeecccEEEEE---ecCC-CCeEEEee----------cCCcEEEEeCCCCcee
Q psy15995        586 --------RKVVLYRVPDFELAHNKEWGFHSAKVNCVA---WSPD-SALVASGS----------LDTTIIIWSLASPAKH  643 (683)
Q Consensus       586 --------~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~---~s~d-~~~l~~~~----------~d~~v~iw~~~~~~~~  643 (683)
                              ..+++.|-.+.+.+....+. ....+.+++   |..+ ..+|++|.          ..|.|++|++...+..
T Consensus       799 ~~g~~~~~s~i~lidp~t~~~i~~~~l~-~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~  877 (1158)
T 3ei3_A          799 SFGEEVEVHNLLIIDQHTFEVLHAHQFL-QNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQ  877 (1158)
T ss_dssp             -CCCEEEEEEEEEEETTTCCEEEEEECC-TTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEE
T ss_pred             hcCCceeeEEEEEEeCCCCeEEEEEeCC-CCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEE
Confidence                    23677777777765554444 344455555   4333 46888876          3478999999855444


Q ss_pred             eEeecCCCCCCeeEEEEccCCeEEEeeCCCcEEEEeec
Q psy15995        644 IIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       644 ~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~v~vw~~~  681 (683)
                      ...+.. ..++|++|+-..+.+|++.  ...|++|++.
T Consensus       878 lv~~~~-v~g~v~al~~~~g~Lla~i--g~~l~vy~l~  912 (1158)
T 3ei3_A          878 TVAEKE-VKGAVYSMVEFNGKLLASI--NSTVRLYEWT  912 (1158)
T ss_dssp             EEEEEE-ESSCEEEEEEETTEEEEEE--TTEEEEEEEC
T ss_pred             EEEEEE-cCCcCEEEeeeCCEEEEEc--CCEEEEEECC
Confidence            333322 3678999987777544444  3679999885

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.40  E-value=6e-11  Score=113.18  Aligned_cols=300  Identities=10%  Similarity=0.005  Sum_probs=193.5

Q ss_pred             EeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCC
Q psy15995         50 LGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIG  129 (683)
Q Consensus        50 ~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~  129 (683)
                      +....+|.+.+.+.++.|..|| .+++....+..+...+.++...++|++. .++.+  |..+|. +++.+..+....  
T Consensus        25 ~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~-v~t~~--l~~~d~-~g~~~~~~~~~~--   97 (330)
T 3hxj_A           25 PILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIY-FGSDK--VYAINP-DGTEKWRFDTKK--   97 (330)
T ss_dssp             CEECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEEC-CSSCE--EEEECC-CGGGGGGSCC----
T ss_pred             ceEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEE-EecCc--EEEECC-CCcEEEEEECCC--
Confidence            3456777766666688899999 8888766666566677888888888644 44444  888886 666655544332  


Q ss_pred             CCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCce
Q psy15995        130 GPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRER  209 (683)
Q Consensus       130 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~  209 (683)
                                  .......+.  +..|..++.++.|..+|.. ++.......  ....+.++...+++... +++.+.  
T Consensus        98 ------------~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~--~~~~~~~~~~~~~g~l~-vgt~~~--  157 (330)
T 3hxj_A           98 ------------AIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKT--KKAIYATPIVSEDGTIY-VGSNDN--  157 (330)
T ss_dssp             ---------------CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEEC--SSCCCSCCEECTTSCEE-EECTTS--
T ss_pred             ------------CcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcC--CCceeeeeEEcCCCEEE-EEcCCC--
Confidence                        111222233  4456677788999999988 665544433  23456677777777744 444332  


Q ss_pred             EEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEE
Q psy15995        210 FGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFAS  289 (683)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  289 (683)
                      .+..++.+ ++...........+.++...+++.  +..++  +.+..+| .+++...........+.++...++|. +..
T Consensus       158 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~--l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v  230 (330)
T 3hxj_A          158 YLYAINPD-GTEKWRFKTNDAITSAASIGKDGT--IYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYV  230 (330)
T ss_dssp             EEEEECTT-SCEEEEEECSSCCCSCCEECTTCC--EEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEE
T ss_pred             EEEEECCC-CCEeEEEecCCCceeeeEEcCCCE--EEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEE
Confidence            25566666 777667666666777888877776  55555  8899999 77777766665666788888888886 555


Q ss_pred             EcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEe
Q psy15995        290 AGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW  369 (683)
Q Consensus       290 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  369 (683)
                      ++.++.+..++ .+++....+..  ....+..+...+++ .|..++.+|.+..+|. +++....+..... ....+... 
T Consensus       231 ~t~~~gl~~~~-~~g~~~~~~~~--~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~-~~~~~~~d-  303 (330)
T 3hxj_A          231 TSLDGHLYAIN-PDGTEKWRFKT--GKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSW-IIATPVID-  303 (330)
T ss_dssp             EETTTEEEEEC-TTSCEEEEEEC--SSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSC-CCSCCEEC-
T ss_pred             EcCCCeEEEEC-CCCCEeEEeeC--CCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCc-cccceEEc-
Confidence            66678888888 45655555543  22333445555555 5777788888999996 6666665544321 22222222 


Q ss_pred             cCCEEEEEecCCcEEEEecCC
Q psy15995        370 QGDYLLTVSLSGFISYLDVNN  390 (683)
Q Consensus       370 ~~~~l~~~~~~g~i~~~~~~~  390 (683)
                      .+..+.+++.+|.+.+.....
T Consensus       304 ~~g~l~~gt~~G~~~~~~~~~  324 (330)
T 3hxj_A          304 ENGTIYFGTRNGKFYALFNLE  324 (330)
T ss_dssp             TTCCEEEECTTSCEEEEEC--
T ss_pred             CCCEEEEEcCCCeEEEEeccc
Confidence            445678899999999887664

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.40  E-value=2e-10  Score=119.70  Aligned_cols=313  Identities=13%  Similarity=0.100  Sum_probs=195.1

Q ss_pred             CcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEecccccee
Q psy15995         97 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHI  176 (683)
Q Consensus        97 ~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~  176 (683)
                      +..|++++.++.|.-+|..+|+.+.++.............     .....-...-++..+++++.|+.|..+|..+|+.+
T Consensus        70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~  144 (689)
T 1yiq_A           70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEAC-----CDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRA  144 (689)
T ss_dssp             TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCT-----TCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCcccccccc-----ccCCCCccEEECCEEEEEccCCEEEEEECCCCCEe
Confidence            4567777778899999999999988876542110000000     00000011224557888889999999999999988


Q ss_pred             eeccccccCCCeeEEEEcC---CCCeEEEEecC----CceEEEEEEccCCCceeeeecCC--------------------
Q psy15995        177 LKNEFHPIGGPIKDIAWSP---DNQRMVVVGEG----RERFGHVFMSETGTSVGEISGQS--------------------  229 (683)
Q Consensus       177 ~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--------------------  229 (683)
                      ..............+..+|   ++ .+++....    .+..+..++.++|+.+..+....                    
T Consensus       145 W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~  223 (689)
T 1yiq_A          145 WSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWF  223 (689)
T ss_dssp             EEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCC
T ss_pred             eeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccC
Confidence            7766531111111111222   33 34443322    23457778888888876654210                    


Q ss_pred             -----------cCeEEEEeecCCCeEEEEeeCCC-------------------eEEEEcCCCCceeeeccc--cc-----
Q psy15995        230 -----------KPINSCDFKPSRPFRIITGSEDN-------------------TIAVFEGPPFKFKMTKQE--HS-----  272 (683)
Q Consensus       230 -----------~~v~~~~~~~~~~~~l~~~~~d~-------------------~i~iw~~~~~~~~~~~~~--~~-----  272 (683)
                                 ..-..+++.|++.. ++.+..++                   .|..+|..+++.+..++.  |.     
T Consensus       224 g~~w~~~~~g~~~w~~~~~d~~~~~-vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~  302 (689)
T 1yiq_A          224 GDAYVEQGGGGTAWDSFAYDPELNL-LYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYT  302 (689)
T ss_dssp             SSTHHHHCEECCCCSCEEEETTTTE-EEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCC
T ss_pred             CceeeecCCCCccccceeEcCCCCE-EEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccccc
Confidence                       11125788888774 77777765                   399999999998877653  21     


Q ss_pred             --cCeEEEEECCCCC---EEEEEcCCCcEEEEeCCCCeeEEeccCCc--------------------------ccc----
Q psy15995        273 --RFVQAVRYSPSGS---HFASAGFDGKVFLYDGASADLVSELGNPA--------------------------HKG----  317 (683)
Q Consensus       273 --~~v~~~~~~~~~~---~l~~~~~dg~i~iw~~~~~~~~~~~~~~~--------------------------~~~----  317 (683)
                        ..+.......+|+   .++.++.+|.++++|..+|+.+.......                          ...    
T Consensus       303 ~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~  382 (689)
T 1yiq_A          303 ATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVT  382 (689)
T ss_dssp             CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEES
T ss_pred             CCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeC
Confidence              1222223333564   78889999999999999999875432210                          000    


Q ss_pred             -------CeEEEEEccCCCEEEEEEC---------------------------------------------CCcEEEEEC
Q psy15995        318 -------GVYAVAWKPDGTQLLTASG---------------------------------------------DKTCKLWDI  345 (683)
Q Consensus       318 -------~i~~~~~~~~~~~l~~~~~---------------------------------------------dg~i~iwd~  345 (683)
                             .-..++++|+..++++...                                             +|.|..||+
T Consensus       383 p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~  462 (689)
T 1yiq_A          383 PAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDP  462 (689)
T ss_dssp             SCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEET
T ss_pred             CCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEEC
Confidence                   0112688888888777532                                             367999999


Q ss_pred             CCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEE
Q psy15995        346 ETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVF  418 (683)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  418 (683)
                      .+++.+.++.......  .-.+...+..++.++.+|.++.||.++++..-+.-.++.....-+.|..+|+..+
T Consensus       463 ~tG~~~W~~~~~~~~~--~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv  533 (689)
T 1yiq_A          463 VKQQAAWEVPYVTIFN--GGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYV  533 (689)
T ss_dssp             TTTEEEEEEEESSSCC--CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             CCCCeEeEccCCCCcc--CccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEE
Confidence            9999988876654332  2345568889999999999999999986554333223322234466777886544

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.39  E-value=3e-10  Score=107.37  Aligned_cols=224  Identities=8%  Similarity=-0.041  Sum_probs=146.8

Q ss_pred             eEEEeeCCCCCeEEEe--cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccc
Q psy15995         47 PIVLGGDPKGKNFLYT--NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNE  124 (683)
Q Consensus        47 ~~~~~~s~~~~~l~~~--~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~  124 (683)
                      ....+|+|+++.+++.  .++.|..||.++++... +. ....+.+++++|+|+++++. .+ .|.+||..+++......
T Consensus        51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~  126 (326)
T 2ghs_A           51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE  126 (326)
T ss_dssp             EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred             CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence            3466799987766655  46799999998876532 32 34679999999999888765 34 49999998775432111


Q ss_pred             cccCCCCcccceeeeeecceeeeEeeccceEEEeecC------CccEEEEeccccceeeeccccccCCCeeEEEEcCCCC
Q psy15995        125 FHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI------SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQ  198 (683)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  198 (683)
                      . ...         .....+..++++|+|+++++...      .+.|..++  +++... .  .........++|+||++
T Consensus       127 ~-~~~---------~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~--~~~~~~~~~i~~s~dg~  191 (326)
T 2ghs_A          127 L-ESD---------LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-L--FADISIPNSICFSPDGT  191 (326)
T ss_dssp             S-STT---------CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-E--EEEESSEEEEEECTTSC
T ss_pred             C-CCC---------CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-e--eCCCcccCCeEEcCCCC
Confidence            1 000         00145788999999987665432      24555555  443221 1  11224567899999999


Q ss_pred             eEEEEecCCceEEEEEEcc--CC-Cc-----eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc
Q psy15995        199 RMVVVGEGRERFGHVFMSE--TG-TS-----VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE  270 (683)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~--~~-~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~  270 (683)
                      .++++..... .+.+++.+  ++ ..     ...+.........+++.+++.. .++...++.|.+|+. +++....+..
T Consensus       192 ~lyv~~~~~~-~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~l-wva~~~~~~v~~~d~-~g~~~~~i~~  268 (326)
T 2ghs_A          192 TGYFVDTKVN-RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI-WNARWGEGAVDRYDT-DGNHIARYEV  268 (326)
T ss_dssp             EEEEEETTTC-EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE-EEEEETTTEEEEECT-TCCEEEEEEC
T ss_pred             EEEEEECCCC-EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCE-EEEEeCCCEEEEECC-CCCEEEEEEC
Confidence            8887765432 35666664  45 21     1122233456788999999974 555556688999997 5666666666


Q ss_pred             cccCeEEEEEC-CCCCEEEEEcC
Q psy15995        271 HSRFVQAVRYS-PSGSHFASAGF  292 (683)
Q Consensus       271 ~~~~v~~~~~~-~~~~~l~~~~~  292 (683)
                      +...+.+++|+ ++++.|++++.
T Consensus       269 ~~~~~~~~af~g~d~~~L~vt~~  291 (326)
T 2ghs_A          269 PGKQTTCPAFIGPDASRLLVTSA  291 (326)
T ss_dssp             SCSBEEEEEEESTTSCEEEEEEB
T ss_pred             CCCCcEEEEEecCCCCEEEEEec
Confidence            66779999998 88887665543

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.37  E-value=2.6e-11  Score=114.53  Aligned_cols=178  Identities=10%  Similarity=0.013  Sum_probs=136.2

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccce--------eeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEE
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEH--------ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHV  213 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~--------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~  213 (683)
                      ..+..+++++...++++|+.++ +.+|++.+.+.        ........+.. |..++|  |++.|+++ .+  ..+.+
T Consensus        38 ~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~--~~l~v  110 (388)
T 1xip_A           38 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TR--NALYS  110 (388)
T ss_dssp             SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ES--SEEEE
T ss_pred             ccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cC--CcEEE
Confidence            4688999999999999999875 55599875541        01111223446 999999  99999988 33  34788


Q ss_pred             EEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCC
Q psy15995        214 FMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD  293 (683)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  293 (683)
                      |+..+.........|...+.++.+.+..   +++++.||.+.+||+.++....    +...|+|++|+|+|  ++.|..|
T Consensus       111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p~---~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~d  181 (388)
T 1xip_A          111 LDLEELSEFRTVTSFEKPVFQLKNVNNT---LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKD  181 (388)
T ss_dssp             EESSSTTCEEEEEECSSCEEEEEECSSE---EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETT
T ss_pred             EEchhhhccCccceeecceeeEEecCCC---EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcC
Confidence            8888776666777888888887776552   8888999999999998877643    45689999999999  6778889


Q ss_pred             CcEEEEeCCCCee--EEeccCC-------ccccCeEEEEEccCCCEEEEEE
Q psy15995        294 GKVFLYDGASADL--VSELGNP-------AHKGGVYAVAWKPDGTQLLTAS  335 (683)
Q Consensus       294 g~i~iw~~~~~~~--~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~  335 (683)
                      |++++|+...++.  ...+..+       .|...|.++.|.+++.++++-.
T Consensus       182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~  232 (388)
T 1xip_A          182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG  232 (388)
T ss_dssp             SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred             CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence            9999999888775  5555221       2568899999999988887644

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.36  E-value=1.6e-10  Score=108.33  Aligned_cols=230  Identities=11%  Similarity=0.012  Sum_probs=150.7

Q ss_pred             eEEEeeCCCCCeEEEe--cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccc
Q psy15995         47 PIVLGGDPKGKNFLYT--NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNE  124 (683)
Q Consensus        47 ~~~~~~s~~~~~l~~~--~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~  124 (683)
                      .....|+|+|+.|++.  .++.|..|+. +++. ..+..+...+..++++++|+++++...++.|.+|+.. ++. ..+.
T Consensus        47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~-~~~~  122 (305)
T 3dr2_A           47 SEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA-HLLV  122 (305)
T ss_dssp             EEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEE
T ss_pred             ccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE-EEEE
Confidence            3467799999955554  4689999998 4443 4455567789999999999977776666789999976 432 1111


Q ss_pred             cccCCCCcccceeeeeecceeeeEeeccceEEEe----ecC-------------CccEEEEeccccceeeeccccccCCC
Q psy15995        125 FHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIAS----GDI-------------SGKVRIWDTVNKEHILKNEFHPIGGP  187 (683)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~~~  187 (683)
                      ....+         .....+..+++.++|+..++    |..             .+.|..||..+++.....    ....
T Consensus       123 ~~~~~---------~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~----~~~~  189 (305)
T 3dr2_A          123 GRYAG---------KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA----DLDH  189 (305)
T ss_dssp             CEETT---------EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE----EESS
T ss_pred             eccCC---------CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe----cCCC
Confidence            11000         11145678999999998886    332             356788887666543221    2245


Q ss_pred             eeEEEEcCCCCeEEEEecCC----ceEEEEEEccCCCcee---ee-ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcC
Q psy15995        188 IKDIAWSPDNQRMVVVGEGR----ERFGHVFMSETGTSVG---EI-SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG  259 (683)
Q Consensus       188 i~~~~~s~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~---~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~  259 (683)
                      ...++|+||++.|+++....    ...+.+++.+.+. +.   .+ .........+++.++|+  +.++..+ .|.+|+.
T Consensus       190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~--lwv~~~~-gv~~~~~  265 (305)
T 3dr2_A          190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGW--LWSSSGT-GVCVFDS  265 (305)
T ss_dssp             EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSC--EEECCSS-EEEEECT
T ss_pred             CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCC--EEEecCC-cEEEECC
Confidence            67899999999888876642    1235666665433 11   11 11234456789999997  4444544 5999997


Q ss_pred             CCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEe
Q psy15995        260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD  300 (683)
Q Consensus       260 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  300 (683)
                       .++....+..+. .+..++|+++++.|..++.++ +..++
T Consensus       266 -~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~-l~~~~  303 (305)
T 3dr2_A          266 -DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPC-LWMLP  303 (305)
T ss_dssp             -TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred             -CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence             566666665444 588999999998888877654 44433

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.35  E-value=1.7e-10  Score=108.23  Aligned_cols=235  Identities=9%  Similarity=-0.020  Sum_probs=150.4

Q ss_pred             cccccCcccceEEEEECCCCc-EEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEE
Q psy15995         78 SDIYTEHSCAVNVAKYSPSGF-YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYI  156 (683)
Q Consensus        78 ~~~~~~h~~~v~~~~~s~d~~-~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  156 (683)
                      +..+..+.......+|+|+|+ ++++...++.|..|+.. ++ ...+....              ..+..++++++|+++
T Consensus        37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~--------------~~~~gl~~d~dG~l~  100 (305)
T 3dr2_A           37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDAT--------------AFTNGNAVDAQQRLV  100 (305)
T ss_dssp             CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESC--------------SCEEEEEECTTSCEE
T ss_pred             eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCC--------------CccceeeECCCCCEE
Confidence            344555666778999999998 56677788899999974 43 22222111              457789999999987


Q ss_pred             EeecCCccEEEEeccccceeeecc-cc-ccCCCeeEEEEcCCCCeEEEE----ecCC---------ceEEEEEEcc--CC
Q psy15995        157 ASGDISGKVRIWDTVNKEHILKNE-FH-PIGGPIKDIAWSPDNQRMVVV----GEGR---------ERFGHVFMSE--TG  219 (683)
Q Consensus       157 ~~~~~d~~i~iwd~~~~~~~~~~~-~~-~~~~~i~~~~~s~~~~~l~~~----~~~~---------~~~~~~~~~~--~~  219 (683)
                      ++...++.|.+|+.. ++...... .. .....+.++++.|+|+..++-    ....         .....++.++  ++
T Consensus       101 v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g  179 (305)
T 3dr2_A          101 HCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS  179 (305)
T ss_dssp             EEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC
T ss_pred             EEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC
Confidence            777777889999986 44221111 11 112457789999999876641    1100         0013444444  45


Q ss_pred             CceeeeecCCcCeEEEEeecCCCeEEEEeeCC------CeEEEEcCCCCcee--eec-cccccCeEEEEECCCCCEEEEE
Q psy15995        220 TSVGEISGQSKPINSCDFKPSRPFRIITGSED------NTIAVFEGPPFKFK--MTK-QEHSRFVQAVRYSPSGSHFASA  290 (683)
Q Consensus       220 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------~~i~iw~~~~~~~~--~~~-~~~~~~v~~~~~~~~~~~l~~~  290 (683)
                      +.... . .....+.++|+|+++. |+.+...      +.|.+|+.......  ..+ .........+++.++|+ |.++
T Consensus       180 ~~~~~-~-~~~~p~gl~~spdg~~-lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~  255 (305)
T 3dr2_A          180 PLQRM-A-DLDHPNGLAFSPDEQT-LYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSS  255 (305)
T ss_dssp             CCEEE-E-EESSEEEEEECTTSSE-EEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEEC
T ss_pred             cEEEE-e-cCCCCcceEEcCCCCE-EEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEe
Confidence            44332 3 4456788999999986 4444443      78999997654311  111 11233456789999998 4444


Q ss_pred             cCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC
Q psy15995        291 GFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK  338 (683)
Q Consensus       291 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  338 (683)
                      +.+ .|.+|+. +++.+..+..  .. .+..++|.++++.|+.++.++
T Consensus       256 ~~~-gv~~~~~-~g~~~~~~~~--~~-~~~~~~f~~d~~~L~it~~~~  298 (305)
T 3dr2_A          256 SGT-GVCVFDS-DGQLLGHIPT--PG-TASNCTFDQAQQRLFITGGPC  298 (305)
T ss_dssp             CSS-EEEEECT-TSCEEEEEEC--SS-CCCEEEECTTSCEEEEEETTE
T ss_pred             cCC-cEEEECC-CCCEEEEEEC--CC-ceeEEEEeCCCCEEEEEcCCe
Confidence            444 4999997 5777777654  22 588999999998888888764

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=99.30  E-value=4e-06  Score=91.73  Aligned_cols=558  Identities=13%  Similarity=0.123  Sum_probs=275.9

Q ss_pred             eEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeecc-----ceEEEee--c
Q psy15995         88 VNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI-----GFYIASG--D  160 (683)
Q Consensus        88 v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-----~~~l~~~--~  160 (683)
                      -+++++-.+| +|+.|+..|.=.+|.+.....-       ....+..+..+....+|..+++...     .+.++++  +
T Consensus       329 ~ssl~~l~~g-~lFvgS~~Gds~l~~~~~~~~~-------~~~~~~~~~~~~N~~PI~D~~v~d~~~~~~~~i~~~sG~g  400 (1158)
T 3ei3_A          329 AECLTYLDNG-VVFVGSRLGDSQLVKLNVDSNE-------QGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAF  400 (1158)
T ss_dssp             CSEEEECSTT-EEEEECSSSCEEEEEECSSCCT-------TSCCEEEEEEECCCCSEEEEEEECTTSSSCCEEEEEECCG
T ss_pred             ccEEEEECCC-EEEEEEecCCcEEEEEecCCCC-------ccceEEeEeeecCcCCceeEEEEccCCCCCCeEEEEECcC
Confidence            3677777776 7888888887677766543210       0111233445555567777766542     2333333  2


Q ss_pred             CCccEEEEecccc-ceeeeccccccCCCeeEEEEc---CCCCeEEEEecCCceEEEEEEccCCCceeeee--cCCcCeEE
Q psy15995        161 ISGKVRIWDTVNK-EHILKNEFHPIGGPIKDIAWS---PDNQRMVVVGEGRERFGHVFMSETGTSVGEIS--GQSKPINS  234 (683)
Q Consensus       161 ~d~~i~iwd~~~~-~~~~~~~~~~~~~~i~~~~~s---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~  234 (683)
                      .+|.+++..-.-+ +......+++ -..++.+...   +...++++...+...   ++... ++.+.+..  +-......
T Consensus       401 ~~gsL~~lr~Gi~~~~~~~~~l~g-v~~iWtl~~~~~~~~~~yLvlS~~~~T~---Vl~i~-~e~veev~~~gf~~~~~T  475 (1158)
T 3ei3_A          401 KEGSLRIIRNGIGIHEHASIDLPG-IKGLWPLRSDPNRETDDTLVLSFVGQTR---VLMLN-GEEVEETELMGFVDDQQT  475 (1158)
T ss_dssp             GGCEEEEEEESBCEEEEEEECCCS-CCEEEEECCCSSCSSCCEEEEEETTEEE---EEEEE-TTEEEEECCTTCCSSSCE
T ss_pred             CCCeEEEEecCCCEEEEEeecCCC-ccEEEEEeecCCCCCCCEEEEECCCCeE---EEEEe-CCcccccccccccCCCCc
Confidence            4678888754322 1122223332 2445555543   234677666555432   22221 22222221  11111111


Q ss_pred             EEee--cCCCeEEEEeeCCCeEEEEcCCCCceeeecccc-ccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEecc
Q psy15995        235 CDFK--PSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH-SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG  311 (683)
Q Consensus       235 ~~~~--~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  311 (683)
                      +...  .++  .++=... ..|++.+....+.+..+... ...|...+.+.  .+++.++ ++.+.++++..++......
T Consensus       476 L~~~~l~~~--~ivQVt~-~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~  549 (1158)
T 3ei3_A          476 FFCGNVAHQ--QLIQITS-ASVRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISH  549 (1158)
T ss_dssp             EEEEEETTT--EEEEEES-SCEEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred             EEEEEcCCC--eEEEEec-CEEEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecc
Confidence            1111  222  2333333 34666665544445444432 34566666553  3566664 6788888877654332211


Q ss_pred             CCccccCeEEEEEccC------CCEEEEEEC-CCcEEEEECCCCceeeEEEecCcceeceEEEEe--cCCEEEEEecCCc
Q psy15995        312 NPAHKGGVYAVAWKPD------GTQLLTASG-DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW--QGDYLLTVSLSGF  382 (683)
Q Consensus       312 ~~~~~~~i~~~~~~~~------~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~g~  382 (683)
                       ..-...|.|+++.|.      ++++++|.. |++++++++.+.+.+.............+.+..  ...++.+|-.+|.
T Consensus       550 -~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~  628 (1158)
T 3ei3_A          550 -TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGA  628 (1158)
T ss_dssp             -EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSE
T ss_pred             -cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCe
Confidence             124568999999763      468899986 999999999987776655544322233333322  3457889999999


Q ss_pred             EEEEecCCCC-cce--e-eeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEE-Ee---
Q psy15995        383 ISYLDVNNPS-TPI--R-VIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK-AT---  454 (683)
Q Consensus       383 i~~~~~~~~~-~~~--~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~-~~---  454 (683)
                      +..+.+.... ...  + ...+ ..++.-..+...+..-+.+..+....++.-+ ++....  .-....+..++ |+   
T Consensus       629 l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s--~l~~~~v~~~~~F~se~  704 (1158)
T 3ei3_A          629 LFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS--NVNLKEVNYMCPLNSDG  704 (1158)
T ss_dssp             EEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE--EBSSSCCCEEEEECCSS
T ss_pred             EEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe--ccChHHhceEeccCccc
Confidence            8777665321 111  1 1112 2344444444444333333334444444332 222111  11112232222 22   


Q ss_pred             -CCeEEEEEcCCeEEEEeCCCCc-ccCCceecCCCCceeeecCC--eEEEEEeceEEEEeCCceeeee------------
Q psy15995        455 -GELLYTCGIDDTIKQVDLSSNA-YSGPEVKLGSQPRGLDIDEN--TLVTVTVKQISIVENGAKVSSL------------  518 (683)
Q Consensus       455 -~~~l~~~~~d~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------------  518 (683)
                       .+-++.. .++.+++..+.... ......++...++.+...+.  .......+. ...+........            
T Consensus       705 ~~~g~v~~-~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  782 (1158)
T 3ei3_A          705 YPDSLALA-NNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRI-EVQDTSGGTTALRPSASTQALSSS  782 (1158)
T ss_dssp             STTEEEEE-CSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEE-EEECSSSSEEESSCCHHHHCSEEE
T ss_pred             CCCcEEEE-cCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEec-cccccccccchhhhhhhhhhhhhc
Confidence             3445543 45568888875432 22223345555555554443  222222111 111110000000            


Q ss_pred             cCCCC-CcEEEEccC---CCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEE---CCC-CCEEEEEe-------
Q psy15995        519 PIDYE-PSSISLDHE---HGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSF---SPS-NEYLVASD-------  583 (683)
Q Consensus       519 ~~~~~-~~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~---s~~-~~~l~~~~-------  583 (683)
                      ..... +....-.++   +...    .-+.|++.|..+.+......+.....+.+++.   ..+ ..++++|.       
T Consensus       783 ~~~~~~~~~~~~~~~~~~g~~~----~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e  858 (1158)
T 3ei3_A          783 VSSSKLFSSSTAPHETSFGEEV----EVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE  858 (1158)
T ss_dssp             ECCCCCC----------CCCEE----EEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTC
T ss_pred             ccccccccccccCchhhcCCce----eeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCC
Confidence            00000 000000000   0000    12457888887777666666666666666653   332 47888875       


Q ss_pred             ---CCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEE
Q psy15995        584 ---AHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQW  660 (683)
Q Consensus       584 ---~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~  660 (683)
                         ..|.|.+|++..+++....... ..++|++++-- +|++||..  ..+|++|++...+.+. ....+. ..|..+..
T Consensus       859 ~~~~~Gri~vf~v~~~kL~lv~~~~-v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~~~~L~-~~~~~~-~~i~~~~l  932 (1158)
T 3ei3_A          859 AEPKQGRIVVFQYSDGKLQTVAEKE-VKGAVYSMVEF-NGKLLASI--NSTVRLYEWTTEKELR-TECNHY-NNIMALYL  932 (1158)
T ss_dssp             SSCCCEEEEEEEEETTEEEEEEEEE-ESSCEEEEEEE-TTEEEEEE--TTEEEEEEECTTSCEE-EEEEEC-CCSCEEEE
T ss_pred             CCCCceEEEEEEEECCEEEEEEEEE-cCCcCEEEeee-CCEEEEEc--CCEEEEEECCCCceEE-EEeecc-ccEEEEEE
Confidence               3588999999866554443333 56888888744 45544443  4789999998765333 222111 22332222


Q ss_pred             c-cCCeEEEeeCCCcEEEEeec
Q psy15995        661 L-DNDLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       661 ~-~~~~l~s~~~d~~v~vw~~~  681 (683)
                      . -+++++.|..-.+|.+...+
T Consensus       933 ~~~~~~I~vgD~~~Sv~~~~y~  954 (1158)
T 3ei3_A          933 KTKGDFILVGDLMRSVLLLAYK  954 (1158)
T ss_dssp             EEETTEEEEEESSBCEEEEEEE
T ss_pred             eccCCEEEEEEhhheEEEEEEE
Confidence            2 56688888877777776543

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.29  E-value=8.8e-10  Score=103.94  Aligned_cols=227  Identities=10%  Similarity=0.049  Sum_probs=150.0

Q ss_pred             eC--CCCCeEEEec--CCeEEEEeCCCC----ccccccc------C-cccceEEEEECCCCcEEEEecCC------CCEE
Q psy15995         52 GD--PKGKNFLYTN--GNSVIIRNIENP----AISDIYT------E-HSCAVNVAKYSPSGFYIASGDIS------GKVR  110 (683)
Q Consensus        52 ~s--~~~~~l~~~~--~~~i~v~~~~~~----~~~~~~~------~-h~~~v~~~~~s~d~~~las~~~d------g~i~  110 (683)
                      ++  +++++|..++  ++.|.|+|+.+.    +..++++      . ....-..+..+||| .++++..+      |.|.
T Consensus        89 ~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~  167 (462)
T 2ece_A           89 GKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGIL  167 (462)
T ss_dssp             CCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred             cCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence            37  8999998874  679999998754    4444442      1 11245667889999 66665444      6799


Q ss_pred             EEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec-------------------CCccEEEEecc
Q psy15995        111 IWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD-------------------ISGKVRIWDTV  171 (683)
Q Consensus       111 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-------------------~d~~i~iwd~~  171 (683)
                      +.|..+.+.+.+.+......           .---.+.|+|+++.+++..                   ...+|.+||+.
T Consensus       168 vlD~~T~~v~~~~~~~~~~~-----------~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~  236 (462)
T 2ece_A          168 MLDHYSFEPLGKWEIDRGDQ-----------YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLR  236 (462)
T ss_dssp             EECTTTCCEEEECCSBCTTC-----------CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETT
T ss_pred             EEECCCCeEEEEEccCCCCc-----------cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECC
Confidence            99999998887776442110           1122467899999888874                   36899999999


Q ss_pred             ccceeeeccccccCCCeeEEEE--cCCCCeEEEEec-----CCceEEEEEEccCCCc--eee--eec-------------
Q psy15995        172 NKEHILKNEFHPIGGPIKDIAW--SPDNQRMVVVGE-----GRERFGHVFMSETGTS--VGE--ISG-------------  227 (683)
Q Consensus       172 ~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~~~-----~~~~~~~~~~~~~~~~--~~~--~~~-------------  227 (683)
                      +++.+..............+.|  +|+++++++++.     .... +.++.++.++.  ...  +..             
T Consensus       237 ~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~-V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~  315 (462)
T 2ece_A          237 KRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSS-IWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKP  315 (462)
T ss_dssp             TTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEE-EEEEEEETTEEEEEEEEEECCEECCSSCCGGGGG
T ss_pred             CCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCce-EEEEEecCCceeEEEEEeCCCccccccccccccc
Confidence            8876655554322234455655  999999999887     5433 34433333321  000  000             


Q ss_pred             ---CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC---Cceeeeccccc--------------cCeEEEEECCCCCEE
Q psy15995        228 ---QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP---FKFKMTKQEHS--------------RFVQAVRYSPSGSHF  287 (683)
Q Consensus       228 ---~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~---~~~~~~~~~~~--------------~~v~~~~~~~~~~~l  287 (683)
                         -......+.++++++++.++.-..+.|.+||+..   .+.+..+....              .....++++|||++|
T Consensus       316 f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~L  395 (462)
T 2ece_A          316 FKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRV  395 (462)
T ss_dssp             GTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEE
T ss_pred             cccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEE
Confidence               0245789999999998777777789999999752   23333332110              135789999999999


Q ss_pred             EEEc
Q psy15995        288 ASAG  291 (683)
Q Consensus       288 ~~~~  291 (683)
                      +++.
T Consensus       396 yVaN  399 (462)
T 2ece_A          396 YVTN  399 (462)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9887

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.27  E-value=9.5e-09  Score=96.99  Aligned_cols=255  Identities=12%  Similarity=0.142  Sum_probs=166.6

Q ss_pred             cEEEEeccc-----cceeeeccccccCCCeeEEEE-----------c--CCCCeEEEEecCCceEEEEEEccCC----Cc
Q psy15995        164 KVRIWDTVN-----KEHILKNEFHPIGGPIKDIAW-----------S--PDNQRMVVVGEGRERFGHVFMSETG----TS  221 (683)
Q Consensus       164 ~i~iwd~~~-----~~~~~~~~~~~~~~~i~~~~~-----------s--~~~~~l~~~~~~~~~~~~~~~~~~~----~~  221 (683)
                      .|.+.|+..     ++.+....++........+.|           +  +++++|++.+...+. +++++..+.    +.
T Consensus        44 ~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~-I~viD~~t~p~~p~~  122 (462)
T 2ece_A           44 FIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSR-IYIIDTKPNPREPKI  122 (462)
T ss_dssp             EEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCC-EEEEECCSCTTSCEE
T ss_pred             eEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCe-EEEEECCCCCCCcee
Confidence            355666654     444444444443334444555           7  889999988876654 677777543    34


Q ss_pred             eeeee-------cCCcCeEEEEeecCCCeEEEEeeCC------CeEEEEcCCCCceeeecccccc---CeEEEEECCCCC
Q psy15995        222 VGEIS-------GQSKPINSCDFKPSRPFRIITGSED------NTIAVFEGPPFKFKMTKQEHSR---FVQAVRYSPSGS  285 (683)
Q Consensus       222 ~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~  285 (683)
                      .+.+.       ........+...|++ . ++++..+      +.+.++|..+++.+..+.....   .-..+.|+|+++
T Consensus       123 ~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i-~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~  200 (462)
T 2ece_A          123 IKVIEPEEVKKVSGYSRLHTVHCGPDA-I-YISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNE  200 (462)
T ss_dssp             EEEECHHHHHHHHCEEEEEEEEECSSC-E-EEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTT
T ss_pred             eeeechhhcccccCCCcccceeECCCe-E-EEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCC
Confidence            44442       111245567788999 3 5565554      7899999999998888763222   234578899999


Q ss_pred             EEEEEc-------------------CCCcEEEEeCCCCeeEEeccCCccccCeEEEEE--ccCCCEEEEEE------CCC
Q psy15995        286 HFASAG-------------------FDGKVFLYDGASADLVSELGNPAHKGGVYAVAW--KPDGTQLLTAS------GDK  338 (683)
Q Consensus       286 ~l~~~~-------------------~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~------~dg  338 (683)
                      .+++..                   ...+|.+||+.+++.+.++...........+.|  +|+++++++++      .++
T Consensus       201 ~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss  280 (462)
T 2ece_A          201 VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSS  280 (462)
T ss_dssp             EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCE
T ss_pred             EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCc
Confidence            888874                   368999999999988888765322234556666  99999888877      456


Q ss_pred             cEEEEECCCCceee--EEEecC-----------------cceeceEEEEecCCEEEEEec-CCcEEEEecCCCCcc--ee
Q psy15995        339 TCKLWDIETKSVVS--EFIMGN-----------------QVEDQQVSCLWQGDYLLTVSL-SGFISYLDVNNPSTP--IR  396 (683)
Q Consensus       339 ~i~iwd~~~~~~~~--~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~~-~g~i~~~~~~~~~~~--~~  396 (683)
                      +|.+|....++...  .+....                 ......+.+++++++|+++.. .+.|.+||+.....+  +.
T Consensus       281 ~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~  360 (462)
T 2ece_A          281 SIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTG  360 (462)
T ss_dssp             EEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEE
T ss_pred             eEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEE
Confidence            78777665543211  111111                 123567788899999988876 679999998754332  22


Q ss_pred             eeeecc--------------ccEEEEEEeCCCCEEEEEe
Q psy15995        397 VIKGHN--------------KPITALALSPDRGTVFTGS  421 (683)
Q Consensus       397 ~~~~~~--------------~~v~~~~~~~~~~~l~~~~  421 (683)
                      .+....              ..-..++++|||++|+++.
T Consensus       361 ~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          361 KVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             EEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             EEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            222110              1257899999999999887

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.26  E-value=9.9e-11  Score=114.55  Aligned_cols=256  Identities=13%  Similarity=0.125  Sum_probs=174.3

Q ss_pred             CCCCCeEEEec--CCeEEEEeCCCCcccccccC-cccceEEEEE-C-CCCcEEEEec------------------CCCCE
Q psy15995         53 DPKGKNFLYTN--GNSVIIRNIENPAISDIYTE-HSCAVNVAKY-S-PSGFYIASGD------------------ISGKV  109 (683)
Q Consensus        53 s~~~~~l~~~~--~~~i~v~~~~~~~~~~~~~~-h~~~v~~~~~-s-~d~~~las~~------------------~dg~i  109 (683)
                      .+||++++...  ++.|.+.|+++.+..+.++- ....+..+++ + |++++++.++                  .++.+
T Consensus        98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v  177 (595)
T 1fwx_A           98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF  177 (595)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred             CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence            45999999874  56899999999987774432 2345789998 5 9999998874                  33569


Q ss_pred             EEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCc---------------cEEEEeccccc
Q psy15995        110 RIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISG---------------KVRIWDTVNKE  174 (683)
Q Consensus       110 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~---------------~i~iwd~~~~~  174 (683)
                      .+.|..+.+...++...               .....++++|||+++++.+.+.               .|.+.|....+
T Consensus       178 tvID~~t~~v~~qI~Vg---------------g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~  242 (595)
T 1fwx_A          178 TAVDADKWEVAWQVLVS---------------GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE  242 (595)
T ss_dssp             EEEETTTTEEEEEEEES---------------SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH
T ss_pred             EEEECCCCeEEEEEEeC---------------CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee
Confidence            99999988776665543               2345678999999999887653               24455443322


Q ss_pred             eeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccC--CCc-eeeeecCCcCeEEEEeecCCCeEEEEeeCC
Q psy15995        175 HILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSET--GTS-VGEISGQSKPINSCDFKPSRPFRIITGSED  251 (683)
Q Consensus       175 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  251 (683)
                      .                 +.++|++...  ..    +.+.+..+  ++. +..+.. .....++.++|||++.++++..+
T Consensus       243 ~-----------------~v~~Gk~~~i--~~----V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s  298 (595)
T 1fwx_A          243 K-----------------AIAAGDYQEL--NG----VKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLS  298 (595)
T ss_dssp             H-----------------HHHHTCSEEE--TT----EEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTS
T ss_pred             E-----------------eccCCCeeEE--Cc----EEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCC
Confidence            1                 2234444433  11    67777776  444 334432 34567899999999988888899


Q ss_pred             CeEEEEcCCCCc------------eeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCC----------CeeEEe
Q psy15995        252 NTIAVFEGPPFK------------FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS----------ADLVSE  309 (683)
Q Consensus       252 ~~i~iw~~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~----------~~~~~~  309 (683)
                      .+|.++|..+.+            ..... .-......++|+|+|...++.-.|++|.+||+..          .+.+..
T Consensus       299 ~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~k  377 (595)
T 1fwx_A          299 PTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDK  377 (595)
T ss_dssp             SBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEE
T ss_pred             CeEEEEECcccccccccccCcccceEEEc-CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEE
Confidence            999999988653            22222 2335688899999994444566799999999877          456666


Q ss_pred             ccCCccccCe-----EEEEEccCCCEEEEEEC---CCc----------EEEEECCCCce
Q psy15995        310 LGNPAHKGGV-----YAVAWKPDGTQLLTASG---DKT----------CKLWDIETKSV  350 (683)
Q Consensus       310 ~~~~~~~~~i-----~~~~~~~~~~~l~~~~~---dg~----------i~iwd~~~~~~  350 (683)
                      +..  |..+-     .++.++|||++|++...   |+.          -.++|+..++.
T Consensus       378 idV--~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m  434 (595)
T 1fwx_A          378 LDV--HYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKM  434 (595)
T ss_dssp             EEC--SSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred             eec--ccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcE
Confidence            654  33221     22345799999999865   332          17888865553

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.26  E-value=1e-09  Score=107.45  Aligned_cols=302  Identities=13%  Similarity=0.081  Sum_probs=188.5

Q ss_pred             EEEEcCCCcEEEEeCCCCeeEEeccCC-------------------------------------ccccCeEEEEEcc---
Q psy15995        287 FASAGFDGKVFLYDGASADLVSELGNP-------------------------------------AHKGGVYAVAWKP---  326 (683)
Q Consensus       287 l~~~~~dg~i~iw~~~~~~~~~~~~~~-------------------------------------~~~~~i~~~~~~~---  326 (683)
                      +.+|+..|.++++-+.+++.+..+...                                     ...+.......+.   
T Consensus        18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g   97 (595)
T 1fwx_A           18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG   97 (595)
T ss_dssp             EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred             EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence            567788889999888877766654220                                     0012223344544   


Q ss_pred             --CCCEEEEEEC-CCcEEEEECCCCceeeEEEecCcceeceEEE-E-ecCCEEEEEec------------------CCcE
Q psy15995        327 --DGTQLLTASG-DKTCKLWDIETKSVVSEFIMGNQVEDQQVSC-L-WQGDYLLTVSL------------------SGFI  383 (683)
Q Consensus       327 --~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~l~~~~~------------------~g~i  383 (683)
                        ||+++++... ++.|.+.|+.+.+....+..........+.+ . |+++++++++.                  ++.+
T Consensus        98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v  177 (595)
T 1fwx_A           98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF  177 (595)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred             CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence              7888888766 4569999999999888666555455566665 3 89999998852                  3578


Q ss_pred             EEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCc---------------EEEEcCCCCCcceeccCCCCcce
Q psy15995        384 SYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGF---------------ITRWNAKTGENDRVQGAGHGNQI  448 (683)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~---------------i~~w~~~~~~~~~~~~~~~~~~v  448 (683)
                      .+.|..+. +....+.--. ....++++|+|+++++.+.+..               |.+.|....+.            
T Consensus       178 tvID~~t~-~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~------------  243 (595)
T 1fwx_A          178 TAVDADKW-EVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK------------  243 (595)
T ss_dssp             EEEETTTT-EEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH------------
T ss_pred             EEEECCCC-eEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeE------------
Confidence            88888863 3333333212 3466789999999999887642               33333211110            


Q ss_pred             eEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCce-eeeecCCCCCcEE
Q psy15995        449 NGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAK-VSSLPIDYEPSSI  527 (683)
Q Consensus       449 ~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  527 (683)
                        ....|+....    +.+.+.|..+.+                                   +.. ...++....+.++
T Consensus       244 --~v~~Gk~~~i----~~V~VID~~~~~-----------------------------------~~~~~~~Ipvg~~PhGv  282 (595)
T 1fwx_A          244 --AIAAGDYQEL----NGVKVVDGRKEA-----------------------------------SSLFTRYIPIANNPHGC  282 (595)
T ss_dssp             --HHHHTCSEEE----TTEEEEECSGGG-----------------------------------CCSSEEEEEEESSCCCE
T ss_pred             --eccCCCeeEE----CcEEEEeCcccC-----------------------------------CceeEEEEecCCCceEE
Confidence              0001222222    447777776521                                   011 3344555578899


Q ss_pred             EEccCCCEEEEEc-CCCcEEEEEcCCCcc------C----cceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCC-
Q psy15995        528 SLDHEHGLVAVGG-ADSKVHIYELNNKSL------S----PKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPD-  595 (683)
Q Consensus       528 ~~~~~~~~l~~~~-~dg~i~i~d~~~~~~------~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~-  595 (683)
                      .++|||+++++++ .+.+|.++|+.+.+.      .    ......-......++|+|+|...++..-|++|.+||+.+ 
T Consensus       283 ~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a  362 (595)
T 1fwx_A          283 NMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDA  362 (595)
T ss_dssp             EECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHH
T ss_pred             EEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHh
Confidence            9999999887765 578899999986531      0    111223446688999999994445667899999999976 


Q ss_pred             ---------Ccccccccee---eecccEEEEEecCCCCeEEEeec---CCc----------EEEEeCCCCcee
Q psy15995        596 ---------FELAHNKEWG---FHSAKVNCVAWSPDSALVASGSL---DTT----------IIIWSLASPAKH  643 (683)
Q Consensus       596 ---------~~~~~~~~~~---~h~~~v~~~~~s~d~~~l~~~~~---d~~----------v~iw~~~~~~~~  643 (683)
                               .+.+......   +|...-..+.++|||++|+++..   |+-          -.++|+..++..
T Consensus       363 ~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~  435 (595)
T 1fwx_A          363 IRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMV  435 (595)
T ss_dssp             HHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCE
T ss_pred             hhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEE
Confidence                     2333222221   12222223356899999998654   442          288999655543

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.25  E-value=3.4e-09  Score=110.10  Aligned_cols=303  Identities=12%  Similarity=0.105  Sum_probs=190.8

Q ss_pred             CCCeEEEecCCeEEEEeCCCCcccccccCcccc----------e-EEEEECCCCcEEEEecCCCCEEEEeCCCccccccc
Q psy15995         55 KGKNFLYTNGNSVIIRNIENPAISDIYTEHSCA----------V-NVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKN  123 (683)
Q Consensus        55 ~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~----------v-~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~  123 (683)
                      ++..++...++.|+-+|.++++.+-.+......          + ..+++  ++..++.++.|+.|..+|..+|+.+.+.
T Consensus        66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~  143 (668)
T 1kv9_A           66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ  143 (668)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence            455555556788999999999876655432211          0 11222  3557788888999999999999988776


Q ss_pred             ccccCCCCcccceeeeeecceeeeEeeccceEEEeec-----CCccEEEEeccccceeeecccccc--------------
Q psy15995        124 EFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD-----ISGKVRIWDTVNKEHILKNEFHPI--------------  184 (683)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----~d~~i~iwd~~~~~~~~~~~~~~~--------------  184 (683)
                      ........          ..+..--...++..++..+     .+|.|..+|..+|+.+........              
T Consensus       144 ~~~~~~~~----------~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~  213 (668)
T 1kv9_A          144 QTTDPAKP----------YSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREA  213 (668)
T ss_dssp             ECSCTTSS----------CBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHH
T ss_pred             ccCCCCCc----------ceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccc
Confidence            65321100          0011000112444433322     268999999999998876653210              


Q ss_pred             ---------------CCCeeEEEEcCCCCeEEEEecCCc-----------------eEEEEEEccCCCceeeeec--CC-
Q psy15995        185 ---------------GGPIKDIAWSPDNQRMVVVGEGRE-----------------RFGHVFMSETGTSVGEISG--QS-  229 (683)
Q Consensus       185 ---------------~~~i~~~~~s~~~~~l~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~--~~-  229 (683)
                                     ......+++.|+...+++...+..                 ..+..++.++|+.+...+.  |. 
T Consensus       214 ~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~  293 (668)
T 1kv9_A          214 AKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDS  293 (668)
T ss_dssp             HTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC
T ss_pred             cccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcc
Confidence                           011234788888888877765431                 1256677788988877764  22 


Q ss_pred             ------cCeEEEEeecCCC--eEEEEeeCCCeEEEEcCCCCceeeeccccc------------cCe--------------
Q psy15995        230 ------KPINSCDFKPSRP--FRIITGSEDNTIAVFEGPPFKFKMTKQEHS------------RFV--------------  275 (683)
Q Consensus       230 ------~~v~~~~~~~~~~--~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~------------~~v--------------  275 (683)
                            .+.....+..+++  ..++.++.+|.+.++|..+++.+.......            .++              
T Consensus       294 wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~  373 (668)
T 1kv9_A          294 WDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVM  373 (668)
T ss_dssp             SCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEE
T ss_pred             ccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEE
Confidence                  2233333334554  248889999999999999998774322111            000              


Q ss_pred             ----------EEEEECCCCCEEEEEc------------------------------------CCCcEEEEeCCCCeeEEe
Q psy15995        276 ----------QAVRYSPSGSHFASAG------------------------------------FDGKVFLYDGASADLVSE  309 (683)
Q Consensus       276 ----------~~~~~~~~~~~l~~~~------------------------------------~dg~i~iw~~~~~~~~~~  309 (683)
                                ..++++|+...+++..                                    .+|.|..||..+++.+..
T Consensus       374 ~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~  453 (668)
T 1kv9_A          374 WPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWK  453 (668)
T ss_dssp             SSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEE
T ss_pred             CCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEE
Confidence                      1257777766655421                                    237899999999998877


Q ss_pred             ccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCC
Q psy15995        310 LGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD  372 (683)
Q Consensus       310 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (683)
                      ...   ..+.....+...+.++++++.|+.++.||.++++.+.++..........+.+..+++
T Consensus       454 ~~~---~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~  513 (668)
T 1kv9_A          454 VPY---PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGR  513 (668)
T ss_dssp             EEE---SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             ccC---CCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCE
Confidence            653   223333344456788999999999999999999999988877655444555444554

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.22  E-value=6.1e-09  Score=105.81  Aligned_cols=306  Identities=10%  Similarity=0.006  Sum_probs=185.6

Q ss_pred             CCCeEEEec-CCeEEEEeC-CCCcccccccCccc-ce----------EEEEECCCCcEEEEecCCCCEEEEeCCCccccc
Q psy15995         55 KGKNFLYTN-GNSVIIRNI-ENPAISDIYTEHSC-AV----------NVAKYSPSGFYIASGDISGKVRIWDTVNKEHIL  121 (683)
Q Consensus        55 ~~~~l~~~~-~~~i~v~~~-~~~~~~~~~~~h~~-~v----------~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~  121 (683)
                      ++..++... ++.|+-+|. ++++.+-.+..... .+          ..+++  ++..++.++.|+.|..+|..+++.+.
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W  139 (571)
T 2ad6_A           62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW  139 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence            444445545 678888888 78877654432211 00          11222  35577788889999999999998887


Q ss_pred             ccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC-----CccEEEEeccccceeeeccccccC-----------
Q psy15995        122 KNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI-----SGKVRIWDTVNKEHILKNEFHPIG-----------  185 (683)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~-----------  185 (683)
                      +........   .       ..+..--...++..++....     ++.|..+|..+|+.+.+.......           
T Consensus       140 ~~~~~~~~~---~-------~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~  209 (571)
T 2ad6_A          140 EVEVCDPKV---G-------STLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNS  209 (571)
T ss_dssp             EEECCCGGG---T-------CBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTT
T ss_pred             EecCCCCCc---c-------ceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccc
Confidence            665432100   0       01111001124444333322     789999999999887765432210           


Q ss_pred             ------------------------C-CeeEEEEcCCCCeEEEEecCC----------c----eEEEEEEccCCCceeeee
Q psy15995        186 ------------------------G-PIKDIAWSPDNQRMVVVGEGR----------E----RFGHVFMSETGTSVGEIS  226 (683)
Q Consensus       186 ------------------------~-~i~~~~~s~~~~~l~~~~~~~----------~----~~~~~~~~~~~~~~~~~~  226 (683)
                                              + ....+++.++...+++...+.          +    ..+..++.++|+.+...+
T Consensus       210 ~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~  289 (571)
T 2ad6_A          210 ANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQ  289 (571)
T ss_dssp             TCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEE
T ss_pred             ccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEec
Confidence                                    0 012356777766776665321          1    136777888898887765


Q ss_pred             cCC--c-------CeEEEEeecCCC--eEEEEeeCCCeEEEEcCCCCceeeeccccc-------------cCe-------
Q psy15995        227 GQS--K-------PINSCDFKPSRP--FRIITGSEDNTIAVFEGPPFKFKMTKQEHS-------------RFV-------  275 (683)
Q Consensus       227 ~~~--~-------~v~~~~~~~~~~--~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-------------~~v-------  275 (683)
                      ...  .       ...-+....+++  ..++.++.+|.+.++|..+++.+.......             .++       
T Consensus       290 ~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~  369 (571)
T 2ad6_A          290 KTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFAT  369 (571)
T ss_dssp             SSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCC
T ss_pred             CCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCC
Confidence            321  1       111122234564  347778899999999999998776543211             111       


Q ss_pred             -------------------EEEEECCCCCEEEEEc-------------------------------------CCCcEEEE
Q psy15995        276 -------------------QAVRYSPSGSHFASAG-------------------------------------FDGKVFLY  299 (683)
Q Consensus       276 -------------------~~~~~~~~~~~l~~~~-------------------------------------~dg~i~iw  299 (683)
                                         ..++++|+...+++..                                     .+|.|..|
T Consensus       370 ~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~  449 (571)
T 2ad6_A          370 RMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAF  449 (571)
T ss_dssp             CTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEE
T ss_pred             CCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEE
Confidence                               2357788877776653                                     34789999


Q ss_pred             eCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEE
Q psy15995        300 DGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLL  375 (683)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  375 (683)
                      |..+++.+.+...   ...+....+...+..++.++.|+.++.+|.++++.+.++..........+.+..+++.++
T Consensus       450 D~~tG~~~W~~~~---~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv  522 (571)
T 2ad6_A          450 DLTTGKAKWTKWE---KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI  522 (571)
T ss_dssp             CTTTCCEEEEEEE---SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             ECCCCCEEEEecC---CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence            9999998877653   222333233334667888999999999999999999998877655444444445555333

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.20  E-value=3.2e-08  Score=90.57  Aligned_cols=253  Identities=9%  Similarity=0.003  Sum_probs=158.8

Q ss_pred             CCeEEEecCCeEEEEeCCCCccc-----ccccCcccceEEEEECCCCcEEE-EecCCCCEEEEeCCCcccccccccccCC
Q psy15995         56 GKNFLYTNGNSVIIRNIENPAIS-----DIYTEHSCAVNVAKYSPSGFYIA-SGDISGKVRIWDTVNKEHILKNEFHPIG  129 (683)
Q Consensus        56 ~~~l~~~~~~~i~v~~~~~~~~~-----~~~~~h~~~v~~~~~s~d~~~la-s~~~dg~i~iwd~~~~~~~~~~~~~~~~  129 (683)
                      |++|.++..+.|..+++++....     ..+......+..++|+++++.|. +-..++.|..+++...........    
T Consensus         1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~----   76 (267)
T 1npe_A            1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQ----   76 (267)
T ss_dssp             CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECT----
T ss_pred             CcEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEEC----
Confidence            45777777779999998876532     11222345678999999765555 445677899999876532111110    


Q ss_pred             CCcccceeeeeecceeeeEeeccc-eEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCC-
Q psy15995        130 GPIKDIGTLLSLTSIRNILVLSIG-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR-  207 (683)
Q Consensus       130 ~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~-  207 (683)
                                .......+++.+++ ...++-...+.|.++++........  ..........++++|++..++++.... 
T Consensus        77 ----------~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~--~~~~~~~P~~i~vd~~~g~lyv~~~~~~  144 (267)
T 1npe_A           77 ----------DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL--FDTGLVNPRGIVTDPVRGNLYWTDWNRD  144 (267)
T ss_dssp             ----------TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSSEEEEEEETTTTEEEEEECCSS
T ss_pred             ----------CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE--EECCCCCccEEEEeeCCCEEEEEECCCC
Confidence                      01356789999865 4455556678899999875432111  111124678999999888877776542 


Q ss_pred             ceEEEEEEccCCCceeeee-cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCE
Q psy15995        208 ERFGHVFMSETGTSVGEIS-GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSH  286 (683)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  286 (683)
                      ...+..+..+ +.....+. ........+++++++..++++-...+.|.+++............ ......++..  +..
T Consensus       145 ~~~I~~~~~d-g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~  220 (267)
T 1npe_A          145 NPKIETSHMD-GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKN  220 (267)
T ss_dssp             SCEEEEEETT-SCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTE
T ss_pred             CcEEEEEecC-CCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCE
Confidence            2234445544 33323322 33456789999998876667777788999999875443333322 2334566654  444


Q ss_pred             EEEE-cCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCC
Q psy15995        287 FASA-GFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGT  329 (683)
Q Consensus       287 l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  329 (683)
                      |+.+ ...+.|..+|..+++.+..+.. +.......+++.|++.
T Consensus       221 lyva~~~~~~v~~~d~~~g~~~~~i~~-g~~~~p~gi~~~~~~~  263 (267)
T 1npe_A          221 LYYTDWKTNSVIAMDLAISKEMDTFHP-HKQTRLYGITIALSQC  263 (267)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEECC-SSCCCCCCEEEECSCC
T ss_pred             EEEEECCCCeEEEEeCCCCCceEEEcc-ccccccceeeecCccC
Confidence            5444 4568999999999998888753 1222467788887653

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=99.20  E-value=6.6e-06  Score=84.16  Aligned_cols=408  Identities=9%  Similarity=-0.020  Sum_probs=224.0

Q ss_pred             CCCeEEEeeCCCCCeEEEe--cCCeEEEEeCCCCcc-cccccCcccceEEEEECCCCcEE-EEecCCCCEEEEeCCCccc
Q psy15995         44 RGQPIVLGGDPKGKNFLYT--NGNSVIIRNIENPAI-SDIYTEHSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEH  119 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~--~~~~i~v~~~~~~~~-~~~~~~h~~~v~~~~~s~d~~~l-as~~~dg~i~iwd~~~~~~  119 (683)
                      -..+..+++++.++.|.++  ..+.|..+++++... ...+...-.....+++.+.++.| ++-...+.|.+.++.....
T Consensus        39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~  118 (619)
T 3s94_A           39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR  118 (619)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred             CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence            3467899999988888877  367899999876642 22333333578899999965555 4555678899999876432


Q ss_pred             ccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec--CCccEEEEeccccceeeeccccccCCCeeEEEEcCCC
Q psy15995        120 ILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD--ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDN  197 (683)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~  197 (683)
                      ..... .             .......+++.|.+.+|....  ..+.|...++........  ....-.....+++++++
T Consensus       119 ~~l~~-~-------------~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l--~~~~~~~P~Glald~~~  182 (619)
T 3s94_A          119 KVLFW-Q-------------ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII--INSEIYWPNGLTLDYEE  182 (619)
T ss_dssp             EEEEC-S-------------SCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE--ECSSCSSEEEEEEETTT
T ss_pred             EEEEe-C-------------CCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEE--EeCCCCCCcEEEEEccC
Confidence            11111 1             114567889998654444433  245666666654322111  11123567899999998


Q ss_pred             CeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccc-----
Q psy15995        198 QRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS-----  272 (683)
Q Consensus       198 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-----  272 (683)
                      +.|+.+...... +...+.+.........+.......+++..+  .++++-...+.|...|..+++....+....     
T Consensus       183 ~~LY~aD~~~~~-I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~  259 (619)
T 3s94_A          183 QKLYWADAKLNF-IHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMD  259 (619)
T ss_dssp             TEEEEEETTTCC-EEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSE
T ss_pred             CEEEEEeCCCCe-EEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcE
Confidence            888888665432 444444322221112212222345666544  346666667788888866554322211100     


Q ss_pred             --------------------cCe--EEE---------EECC-------CC-------C-EEEEEcCCCcEEEEeCCCCee
Q psy15995        273 --------------------RFV--QAV---------RYSP-------SG-------S-HFASAGFDGKVFLYDGASADL  306 (683)
Q Consensus       273 --------------------~~v--~~~---------~~~~-------~~-------~-~l~~~~~dg~i~iw~~~~~~~  306 (683)
                                          +..  .|+         +..|       |+       + +|+.+. .+.|+..++.....
T Consensus       260 i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~-~~~i~~i~l~~~~~  338 (619)
T 3s94_A          260 IHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLAR-RTDLRRISLDTPDF  338 (619)
T ss_dssp             EEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEE-SSCEEEEESSSTTC
T ss_pred             EEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEc-ccceEEEecCCCcc
Confidence                                000  111         0111       11       1 233332 35566666655432


Q ss_pred             EE-eccCCccccCeEEEEEccCCCEEEEEE-CCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEE-ecCCcE
Q psy15995        307 VS-ELGNPAHKGGVYAVAWKPDGTQLLTAS-GDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTV-SLSGFI  383 (683)
Q Consensus       307 ~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~i  383 (683)
                      .. .+.. ..-..+.+++|.+.+..|+.+. ..+.|+.+++..... ..+....-.....+++.+.+..|+.+ ...+.|
T Consensus       339 ~~~~~~~-~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~-~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I  416 (619)
T 3s94_A          339 TDIVLQL-EDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGS-QFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRI  416 (619)
T ss_dssp             CCEECCC-SCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred             ceeEEec-cccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCcc-EEEEECCCCCcCceEEecccCcEEEEeCCCCcE
Confidence            11 1111 1234578899998666666554 467888888875433 23333333455678888755555444 456789


Q ss_pred             EEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeC--CCcEEEEcCCCCCcceeccCCCCcceeEEEEe--CCeEE
Q psy15995        384 SYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSH--DGFITRWNAKTGENDRVQGAGHGNQINGMKAT--GELLY  459 (683)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~  459 (683)
                      .+.++..... .......-....++++.|....|+.+..  .+.|...++......... ...-.....++++  ++.|+
T Consensus       417 ~v~~~~G~~~-~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~-~~~l~~P~GlalD~~~~~LY  494 (619)
T 3s94_A          417 EVTRLNGTMR-KILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLV-NTSLGWPNGLALDYDEGKIY  494 (619)
T ss_dssp             EEEETTSCSC-EEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSSCSCEEEEEEETTTTEEE
T ss_pred             EEEeCCCCeE-EEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEE-eCCCCCCeeeEEcccCCEEE
Confidence            9988875432 1222223456889999997666665543  356777776544332222 2233455667776  55665


Q ss_pred             EEE-cCCeEEEEeCCCC
Q psy15995        460 TCG-IDDTIKQVDLSSN  475 (683)
Q Consensus       460 ~~~-~d~~i~~~~~~~~  475 (683)
                      .+. ..+.|..+++...
T Consensus       495 ~aD~~~~~I~~~~~dG~  511 (619)
T 3s94_A          495 WGDAKTDKIEVMNTDGT  511 (619)
T ss_dssp             EEETTTTEEEEEESSSC
T ss_pred             EEECCCCEEEEEecCCC
Confidence            554 4467888887653

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=99.19  E-value=1.3e-08  Score=102.93  Aligned_cols=306  Identities=13%  Similarity=0.091  Sum_probs=185.6

Q ss_pred             CCCeEEEec-CCeEEEEeC-CCCcccccccCccc-----------ceEEEEECCCCcE----EEEecCCCCEEEEeCCCc
Q psy15995         55 KGKNFLYTN-GNSVIIRNI-ENPAISDIYTEHSC-----------AVNVAKYSPSGFY----IASGDISGKVRIWDTVNK  117 (683)
Q Consensus        55 ~~~~l~~~~-~~~i~v~~~-~~~~~~~~~~~h~~-----------~v~~~~~s~d~~~----las~~~dg~i~iwd~~~~  117 (683)
                      ++..++... ++.|+-+|. ++++.+-.+.....           .-..++++|++..    |+.++.|+.|.-+|..+|
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG  141 (599)
T 1w6s_A           62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (599)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence            444444445 677888888 78877654432211           0123456443333    788888999999999999


Q ss_pred             ccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec-----CCccEEEEeccccceeeeccccccC-------
Q psy15995        118 EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD-----ISGKVRIWDTVNKEHILKNEFHPIG-------  185 (683)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----~d~~i~iwd~~~~~~~~~~~~~~~~-------  185 (683)
                      +.+.+........     .     ..+..--...++..++..+     .++.|+-+|..+|+.+.+.......       
T Consensus       142 ~~~W~~~~~~~~~-----~-----~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p  211 (599)
T 1w6s_A          142 ETVWKVENSDIKV-----G-----STLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLAS  211 (599)
T ss_dssp             CEEEEEECCCGGG-----T-----CBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCT
T ss_pred             CEEEeecCCCCCc-----c-----ceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccc
Confidence            8887655432100     0     0111111112444443332     3789999999999987765543210       


Q ss_pred             ----------------------------C-CeeEEEEcCCCCeEEEEecCC--------------ceEEEEEEccCCCce
Q psy15995        186 ----------------------------G-PIKDIAWSPDNQRMVVVGEGR--------------ERFGHVFMSETGTSV  222 (683)
Q Consensus       186 ----------------------------~-~i~~~~~s~~~~~l~~~~~~~--------------~~~~~~~~~~~~~~~  222 (683)
                                                  + .-..+++.++...+++...+.              ...+..++.++|+.+
T Consensus       212 ~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~  291 (599)
T 1w6s_A          212 DFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAK  291 (599)
T ss_dssp             TTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEE
T ss_pred             ccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCcee
Confidence                                        0 001356667777777766542              123677888889888


Q ss_pred             eeeecCCcC---------eEEEEee-cCCC--eEEEEeeCCCeEEEEcCCCCceeeeccccc-------------cCe--
Q psy15995        223 GEISGQSKP---------INSCDFK-PSRP--FRIITGSEDNTIAVFEGPPFKFKMTKQEHS-------------RFV--  275 (683)
Q Consensus       223 ~~~~~~~~~---------v~~~~~~-~~~~--~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-------------~~v--  275 (683)
                      ..++.....         ..-+... .+++  ..++.++.+|.+.++|..+++.+.......             .++  
T Consensus       292 W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~  371 (599)
T 1w6s_A          292 FGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRD  371 (599)
T ss_dssp             EEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEEC
T ss_pred             eEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeec
Confidence            776643221         1112222 4552  347778899999999999998776543110             111  


Q ss_pred             ------------------------EEEEECCCCCEEEEEc---------------------------------------C
Q psy15995        276 ------------------------QAVRYSPSGSHFASAG---------------------------------------F  292 (683)
Q Consensus       276 ------------------------~~~~~~~~~~~l~~~~---------------------------------------~  292 (683)
                                              ..++++|+..++++..                                       .
T Consensus       372 ~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~  451 (599)
T 1w6s_A          372 PEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEG  451 (599)
T ss_dssp             GGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBC
T ss_pred             cccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCC
Confidence                                    1356677666554421                                       3


Q ss_pred             CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCC
Q psy15995        293 DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD  372 (683)
Q Consensus       293 dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (683)
                      .|.|..||+.+++.+.....   ..+...-.....+.+++.++.|+.++.+|.++++.+.++..........+.+..+++
T Consensus       452 ~G~l~A~D~~tG~~~W~~~~---~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~  528 (599)
T 1w6s_A          452 LGQIKAYNAITGDYKWEKME---RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGT  528 (599)
T ss_dssp             CEEEEEECTTTCCEEEEEEE---SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             cCeEEEEECCCCCEEeEecC---CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCE
Confidence            47899999999988877642   111211112234677888999999999999999999999877666555565555665


Q ss_pred             E
Q psy15995        373 Y  373 (683)
Q Consensus       373 ~  373 (683)
                      .
T Consensus       529 q  529 (599)
T 1w6s_A          529 Q  529 (599)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.13  E-value=2.1e-08  Score=104.27  Aligned_cols=292  Identities=13%  Similarity=0.103  Sum_probs=173.6

Q ss_pred             CCEEEEEcCCCcEEEEeCCCCeeEEeccCCcccc--------Ce-EEEEEccCCCEEEEEECCCcEEEEECCCCceeeEE
Q psy15995        284 GSHFASAGFDGKVFLYDGASADLVSELGNPAHKG--------GV-YAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEF  354 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--------~i-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  354 (683)
                      +..+++++.++.|..+|..+|+.+..+.......        .+ ..+++  .+..++.++.|+.|..+|..+++.+.++
T Consensus        66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~  143 (668)
T 1kv9_A           66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ  143 (668)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence            4467777778999999999999888775421100        00 11222  2567888888999999999999998887


Q ss_pred             EecCcceeceE--EEEecCCEEEEEec------CCcEEEEecCCCCcceeeeee--------------------------
Q psy15995        355 IMGNQVEDQQV--SCLWQGDYLLTVSL------SGFISYLDVNNPSTPIRVIKG--------------------------  400 (683)
Q Consensus       355 ~~~~~~~~~~~--~~~~~~~~l~~~~~------~g~i~~~~~~~~~~~~~~~~~--------------------------  400 (683)
                      ...........  ...-.+..++++..      +|.+..+|..++...-+....                          
T Consensus       144 ~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w  223 (668)
T 1kv9_A          144 QTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW  223 (668)
T ss_dssp             ECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred             ccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcccee
Confidence            66422111111  11113556666654      488999998875543222110                          


Q ss_pred             ----ccccEEEEEEeCCCCEEEEEeCCCc-------------------EEEEcCCCCCcceeccCCCCcceeEEEEeCCe
Q psy15995        401 ----HNKPITALALSPDRGTVFTGSHDGF-------------------ITRWNAKTGENDRVQGAGHGNQINGMKATGEL  457 (683)
Q Consensus       401 ----~~~~v~~~~~~~~~~~l~~~~~dg~-------------------i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~  457 (683)
                          +......+++.|+...++.+..++.                   |..+|..+++..-.....+..           
T Consensus       224 ~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~-----------  292 (668)
T 1kv9_A          224 KLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGD-----------  292 (668)
T ss_dssp             HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTC-----------
T ss_pred             eeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCc-----------
Confidence                0111124678888888888877653                   444444444332222110000           


Q ss_pred             EEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCC---
Q psy15995        458 LYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHG---  534 (683)
Q Consensus       458 l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  534 (683)
                                 .|+..                                              ...++....+..+++   
T Consensus       293 -----------~wd~~----------------------------------------------~~~~~~~~d~~~~G~~~~  315 (668)
T 1kv9_A          293 -----------SWDFT----------------------------------------------ATQQITLAELNIDGKPRK  315 (668)
T ss_dssp             -----------CSCCC----------------------------------------------CCSCEEEEEEEETTEEEE
T ss_pred             -----------ccccc----------------------------------------------CCCCcEEEEeccCCcEEE
Confidence                       00000                                              001111122223454   


Q ss_pred             EEEEEcCCCcEEEEEcCCCccCcceeecC-----------Cc------------------------CeeEEEECCCCCEE
Q psy15995        535 LVAVGGADSKVHIYELNNKSLSPKAELDH-----------LG------------------------PVTDCSFSPSNEYL  579 (683)
Q Consensus       535 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----------~~------------------------~v~~~~~s~~~~~l  579 (683)
                      .++.++.+|.++++|..+++++.......           ..                        .-..++++|+...+
T Consensus       316 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~  395 (668)
T 1kv9_A          316 VLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLV  395 (668)
T ss_dssp             EEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEE
T ss_pred             EEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEE
Confidence            68888889999999998887652221110           00                        01126778876666


Q ss_pred             EEE------------------------------------eCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeE
Q psy15995        580 VAS------------------------------------DAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALV  623 (683)
Q Consensus       580 ~~~------------------------------------~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l  623 (683)
                      +..                                    ..+|.|..||+.+++.+-....   ..+.....+...+.++
T Consensus       396 yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~---~~~~~~~~~~t~gg~v  472 (668)
T 1kv9_A          396 YIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY---PTHWNGGTLSTAGNLV  472 (668)
T ss_dssp             EEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE---SSSCCCCEEEETTTEE
T ss_pred             EEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC---CCCCcCceeEeCCCEE
Confidence            542                                    1238899999999998755442   2334444455578899


Q ss_pred             EEeecCCcEEEEeCCCCceeeEeec
Q psy15995        624 ASGSLDTTIIIWSLASPAKHIIIKN  648 (683)
Q Consensus       624 ~~~~~d~~v~iw~~~~~~~~~~~~~  648 (683)
                      ++++.|+.++.||.++++.+..+..
T Consensus       473 f~g~~dg~l~a~d~~tG~~l~~~~~  497 (668)
T 1kv9_A          473 FQGTAAGQMHAYSADKGEALWQFEA  497 (668)
T ss_dssp             EEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             EEECCcccchhhhhhcChhheEecC
Confidence            9999999999999999999988765

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.11  E-value=3.1e-11  Score=116.01  Aligned_cols=190  Identities=14%  Similarity=0.027  Sum_probs=107.8

Q ss_pred             CCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccce
Q psy15995         96 SGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEH  175 (683)
Q Consensus        96 d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~  175 (683)
                      ++.++++++.||.|..||..+|+.+.++...                .+.+..+..++..+++++.|+.|+.||.++++.
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~----------------~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~   71 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKED----------------PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG   71 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEECC----------------CSCCCC-----CCEEECTTTCCEEEC-----CC
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecCC----------------CceecceEcCCCEEEEeCCCCEEEEEECCCCce
Confidence            5778999999999999999999888776541                122333456777888888999999999998876


Q ss_pred             eeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEE
Q psy15995        176 ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIA  255 (683)
Q Consensus       176 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~  255 (683)
                      +........ ..+   .-+|                                    +    +..++  .+++++.++.++
T Consensus        72 ~w~~~~~~~-~~~---~~sp------------------------------------~----~~~~~--~v~~g~~dg~v~  105 (369)
T 2hz6_A           72 LTKLPFTIP-ELV---QASP------------------------------------C----RSSDG--ILYMGKKQDIWY  105 (369)
T ss_dssp             SEECSCCHH-HHH---TTCS------------------------------------C----C-------CCCCEEEEEEE
T ss_pred             eeeeeccCc-ccc---ccCc------------------------------------e----EecCC--EEEEEeCCCEEE
Confidence            544332210 000   0000                                    0    00111  366777889999


Q ss_pred             EEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCC---CEEE
Q psy15995        256 VFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDG---TQLL  332 (683)
Q Consensus       256 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~  332 (683)
                      .||..+++.+..+..+.    ...++|++..+++++.++.|+.||.++++.+..+..  ..  ....++.++.   ..++
T Consensus       106 a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~--~~--~~~~~~~~~~~~~~~v~  177 (369)
T 2hz6_A          106 VIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY--FD--YAASLPEDDVDYKMSHF  177 (369)
T ss_dssp             EECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEE--EE--ECCBCCCCCTTCCCCEE
T ss_pred             EEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec--cc--ccCccccCCccccceEE
Confidence            99999998877766543    234567888899999999999999999987666542  11  1222333322   5677


Q ss_pred             EEECCCcEEEEECCCCceeeEEE
Q psy15995        333 TASGDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       333 ~~~~dg~i~iwd~~~~~~~~~~~  355 (683)
                      +++.+|.+..||..+++.+.++.
T Consensus       178 ~~~~dg~v~a~d~~tG~~~W~~~  200 (369)
T 2hz6_A          178 VSNGDGLVVTVDSESGDVLWIQN  200 (369)
T ss_dssp             EEETSCEEEEECTTTCCEEEEEE
T ss_pred             EECCCCEEEEEECCCCcEEEEec
Confidence            88899999999999998876654

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.09  E-value=1.6e-10  Score=111.13  Aligned_cols=256  Identities=9%  Similarity=-0.085  Sum_probs=135.4

Q ss_pred             CCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcc
Q psy15995         55 KGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIK  133 (683)
Q Consensus        55 ~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  133 (683)
                      ++..++++ .++.|+.||.++++.+..+..  +.+.+..+..+++.+++++.||.|+.||..+++.+.+...+..     
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~-----   80 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP-----   80 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH-----
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc-----
Confidence            34555554 678999999999998877765  5666666677888888888999999999999887655543310     


Q ss_pred             cceeeeeeccee-eeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEE
Q psy15995        134 DIGTLLSLTSIR-NILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH  212 (683)
Q Consensus       134 ~~~~~~~~~~i~-~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~  212 (683)
                              ..+. ...+. ++..+++++.++.|+.||..+|+.+.......      ...++|++..+++++.+.  .+.
T Consensus        81 --------~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~------~~~~~p~~~~v~~~~~dg--~v~  143 (369)
T 2hz6_A           81 --------ELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF------ADSLSPSTSLLYLGRTEY--TIT  143 (369)
T ss_dssp             --------HHHTTCSCC------CCCCEEEEEEEEECCC----------------------------EEEEEEEE--EEE
T ss_pred             --------cccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC------cccccccCCEEEEEecCC--EEE
Confidence                    0011 11111 34577888889999999999998776554332      235567888888776542  256


Q ss_pred             EEEccCCCceeeeecCCcCeEEEEeecCC---CeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEE--
Q psy15995        213 VFMSETGTSVGEISGQSKPINSCDFKPSR---PFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHF--  287 (683)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l--  287 (683)
                      .++.++|+.+..+..+.  .....+.++.   . .+++++.||.+..||..+++.+.........+....+++++...  
T Consensus       144 a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~-~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~~v~  220 (369)
T 2hz6_A          144 MYDTKTRELRWNATYFD--YAASLPEDDVDYKM-SHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVM  220 (369)
T ss_dssp             CCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCC-CEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCEEEC
T ss_pred             EEECCCCCEEEeEeccc--ccCccccCCccccc-eEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceEecc
Confidence            66667888776654321  1223333321   3 37788999999999999998877665332222334455555421  


Q ss_pred             --EEEcCCCcEEEEeCCCCe----eEEeccCCccccCeEEEEEcc--CCCEEEEEECCCcEEEEECC
Q psy15995        288 --ASAGFDGKVFLYDGASAD----LVSELGNPAHKGGVYAVAWKP--DGTQLLTASGDKTCKLWDIE  346 (683)
Q Consensus       288 --~~~~~dg~i~iw~~~~~~----~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~  346 (683)
                        +.+  ++.++.+|..+|+    .+......   ..+.    +|  .+..++.++.+|.+..++..
T Consensus       221 ~~~~~--~~~l~~ld~~tG~~~~~~~W~~~~~---~~~~----sp~~~~g~lyv~~~~G~l~al~~~  278 (369)
T 2hz6_A          221 HINVA--VETLRYLTFMSGEVGRITKWKYPFP---KETE----AKSKLTPTLYVGKYSTSLYASPSM  278 (369)
T ss_dssp             CEEEE--HHHHHHHHHHHHHHHHHHTSCCCCC---CHHH----HHHHSEEEECBEECSSCEECCEEE
T ss_pred             ceeec--ccceeeeehhcCCcccceeeeeccC---cccc----ccccccceEEEecccCCEEecCcc
Confidence              112  3445566665555    33333221   1110    12  24467777777777777654

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.08  E-value=8.5e-08  Score=97.43  Aligned_cols=108  Identities=10%  Similarity=0.082  Sum_probs=70.1

Q ss_pred             CCEEEEEcC-CCcEEEEeC-CCCeeEEeccCCcccc--------C-eEEEEEccCCCEEEEEECCCcEEEEECCCCceee
Q psy15995        284 GSHFASAGF-DGKVFLYDG-ASADLVSELGNPAHKG--------G-VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVS  352 (683)
Q Consensus       284 ~~~l~~~~~-dg~i~iw~~-~~~~~~~~~~~~~~~~--------~-i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  352 (683)
                      +..+++++. ++.|..+|. .+|+.+..........        . -..++.  .+..++.++.|+.+..+|..+++.+.
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W  139 (571)
T 2ad6_A           62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW  139 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence            446667777 789999999 8999887765422110        0 011223  35678888889999999999999988


Q ss_pred             EEEecCcceeceEE--EEecCCEEEEEec------CCcEEEEecCCCCc
Q psy15995        353 EFIMGNQVEDQQVS--CLWQGDYLLTVSL------SGFISYLDVNNPST  393 (683)
Q Consensus       353 ~~~~~~~~~~~~~~--~~~~~~~l~~~~~------~g~i~~~~~~~~~~  393 (683)
                      +...........+.  ....+..++++..      ++.+..+|..++..
T Consensus       140 ~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~  188 (571)
T 2ad6_A          140 EVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGEL  188 (571)
T ss_dssp             EEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCE
T ss_pred             EecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcE
Confidence            77654321100111  1113556777765      68999999987554

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=99.07  E-value=1.4e-07  Score=95.46  Aligned_cols=111  Identities=12%  Similarity=0.074  Sum_probs=71.2

Q ss_pred             CCEEEEEcC-CCcEEEEeC-CCCeeEEeccCCcccc---------CeEEEEEccCCCE----EEEEECCCcEEEEECCCC
Q psy15995        284 GSHFASAGF-DGKVFLYDG-ASADLVSELGNPAHKG---------GVYAVAWKPDGTQ----LLTASGDKTCKLWDIETK  348 (683)
Q Consensus       284 ~~~l~~~~~-dg~i~iw~~-~~~~~~~~~~~~~~~~---------~i~~~~~~~~~~~----l~~~~~dg~i~iwd~~~~  348 (683)
                      +..+++++. ++.|.-+|. .+|+.+.+........         ....+++.|.+..    ++.++.|+.|..+|..++
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG  141 (599)
T 1w6s_A           62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (599)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence            446777777 889999999 8999887775422110         0123455444444    888888999999999999


Q ss_pred             ceeeEEEecCcceeceEE--EEecCCEEEEEec------CCcEEEEecCCCCcc
Q psy15995        349 SVVSEFIMGNQVEDQQVS--CLWQGDYLLTVSL------SGFISYLDVNNPSTP  394 (683)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~------~g~i~~~~~~~~~~~  394 (683)
                      +.+.+...........+.  ..-.+..++++..      +|.++.+|..++...
T Consensus       142 ~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~  195 (599)
T 1w6s_A          142 ETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQV  195 (599)
T ss_dssp             CEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEE
T ss_pred             CEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEE
Confidence            998877654311000110  0112456666653      789999999876543

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.07  E-value=5e-07  Score=82.56  Aligned_cols=256  Identities=11%  Similarity=-0.019  Sum_probs=150.3

Q ss_pred             CcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccce-EEEeecCCccEEEEeccccce
Q psy15995         97 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF-YIASGDISGKVRIWDTVNKEH  175 (683)
Q Consensus        97 ~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~d~~i~iwd~~~~~~  175 (683)
                      |++|..+.. +.|+.+++...... .+...+       . .......+..+++.+++. ..++-...+.|..++...+..
T Consensus         1 ~~~l~~~~~-~~I~~~~~~g~~~~-~~~~~~-------~-~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   70 (267)
T 1npe_A            1 GTHLLFAQT-GKIERLPLERNTMK-KTEAKA-------F-LHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP   70 (267)
T ss_dssp             CEEEEEEEE-EEEEEEEESSSCBC-GGGCEE-------E-EEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC
T ss_pred             CcEEEEEcC-CeEEEEEecCcccc-ccccee-------e-ecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc
Confidence            455666554 47888887654321 100000       0 000114567899999654 455555678999999876542


Q ss_pred             eeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeC--CCe
Q psy15995        176 ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSE--DNT  253 (683)
Q Consensus       176 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d~~  253 (683)
                      ..  ...........+++.|++..++++...... +.+++.+.................++++|++..++++...  .+.
T Consensus        71 ~~--~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~-I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~  147 (267)
T 1npe_A           71 TT--IIRQDLGSPEGIALDHLGRTIFWTDSQLDR-IEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPK  147 (267)
T ss_dssp             EE--EECTTCCCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCE
T ss_pred             EE--EEECCCCCccEEEEEecCCeEEEEECCCCE-EEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcE
Confidence            21  111222467899999998888887765443 4555555332222222223567899999976653444433  468


Q ss_pred             EEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEE-cCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEE
Q psy15995        254 IAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASA-GFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL  332 (683)
Q Consensus       254 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  332 (683)
                      |..++...................+++++++..|+.+ ...+.|..++.........+.   .......++..  +..++
T Consensus       148 I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~---~~~~P~gi~~d--~~~ly  222 (267)
T 1npe_A          148 IETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE---GLQYPFAVTSY--GKNLY  222 (267)
T ss_dssp             EEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE---CCCSEEEEEEE--TTEEE
T ss_pred             EEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec---CCCCceEEEEe--CCEEE
Confidence            8888765432222222233467899999987766554 456789999987654333332   12234566654  44555


Q ss_pred             EEE-CCCcEEEEECCCCceeeEEEecCcceeceEEEEec
Q psy15995        333 TAS-GDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ  370 (683)
Q Consensus       333 ~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (683)
                      .+. ..+.|..+|..+++.+..+..........+.+.++
T Consensus       223 va~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~  261 (267)
T 1npe_A          223 YTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALS  261 (267)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred             EEECCCCeEEEEeCCCCCceEEEccccccccceeeecCc
Confidence            554 56889999999998887776544333444554443

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=99.06  E-value=1.8e-07  Score=95.07  Aligned_cols=308  Identities=15%  Similarity=0.148  Sum_probs=186.2

Q ss_pred             CCCeEEEecCCeEEEEeCCCCcccccccCcccce---------EEEEECCCCcEEEEecCCCCEEEEeCCCccccccccc
Q psy15995         55 KGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAV---------NVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        55 ~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v---------~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      +++.++.+..+.|+-+|.++++.+-.+......-         ..+++  .+..++.++.|+.|.-+|..+|+.+.+...
T Consensus        68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~  145 (582)
T 1flg_A           68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF  145 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred             CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence            4555555553558889999988765554332110         11222  345677788899999999999998877654


Q ss_pred             ccCCCCcccceeeeeecceeeeEeecc---ce-EEEeec------CCccEEEEeccccceeeecccccc-----------
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVLSI---GF-YIASGD------ISGKVRIWDTVNKEHILKNEFHPI-----------  184 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~-~l~~~~------~d~~i~iwd~~~~~~~~~~~~~~~-----------  184 (683)
                      ......   .      .......+..+   |+ .+++++      .++.|.-+|..+|+.+........           
T Consensus       146 ~~~~~~---~------~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~  216 (582)
T 1flg_A          146 ADHGAG---Y------TMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDST  216 (582)
T ss_dssp             SCGGGT---C------BCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEE
T ss_pred             CCCCcC---c------ccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccc
Confidence            321000   0      00001112212   22 455544      378999999999988765433100           


Q ss_pred             ----------------------------CCCeeEEEEcCCCCeEEEEecC-----------C-------c----eEEEEE
Q psy15995        185 ----------------------------GGPIKDIAWSPDNQRMVVVGEG-----------R-------E----RFGHVF  214 (683)
Q Consensus       185 ----------------------------~~~i~~~~~s~~~~~l~~~~~~-----------~-------~----~~~~~~  214 (683)
                                                  ...-..+++.|+...+++...+           .       +    ..+..+
T Consensus       217 ~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~Al  296 (582)
T 1flg_A          217 VTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGV  296 (582)
T ss_dssp             ESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEE
T ss_pred             cccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEE
Confidence                                        0001245677777777776642           1       1    246677


Q ss_pred             EccCCCceeeeec--CCc----CeE---EEEee-cCCC--eEEEEeeCCCeEEEEcCCCCceeeeccccc----------
Q psy15995        215 MSETGTSVGEISG--QSK----PIN---SCDFK-PSRP--FRIITGSEDNTIAVFEGPPFKFKMTKQEHS----------  272 (683)
Q Consensus       215 ~~~~~~~~~~~~~--~~~----~v~---~~~~~-~~~~--~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----------  272 (683)
                      +.++|+.+..++.  |..    .+.   -+... .+++  ..++.++.+|.++++|..+++.+.......          
T Consensus       297 D~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~  376 (582)
T 1flg_A          297 DPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDL  376 (582)
T ss_dssp             CTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECT
T ss_pred             eCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccc
Confidence            7788988877653  321    111   11221 3553  258889999999999999998776543221          


Q ss_pred             ---cCe--------------------------------EEEEECCCCCEEEEEc--------------------------
Q psy15995        273 ---RFV--------------------------------QAVRYSPSGSHFASAG--------------------------  291 (683)
Q Consensus       273 ---~~v--------------------------------~~~~~~~~~~~l~~~~--------------------------  291 (683)
                         .++                                ..++++|+...+++..                          
T Consensus       377 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~  456 (582)
T 1flg_A          377 KTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFR  456 (582)
T ss_dssp             TTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred             cCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceecccee
Confidence               000                                1346677655554432                          


Q ss_pred             -------CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceece
Q psy15995        292 -------FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQ  364 (683)
Q Consensus       292 -------~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  364 (683)
                             .+|.|..||+.+++.+.+...   ..++..-.....+.+++.++.|+.++.||.++++.+.++..........
T Consensus       457 ~~p~~~~~~G~l~A~D~~tG~~~W~~~~---~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P  533 (582)
T 1flg_A          457 IKRMYDDHVGSLRAMDPVSGKVVWEHKE---HLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPP  533 (582)
T ss_dssp             EEESCSSCSEEEEEECTTTCCEEEEEEE---SSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred             ecCCCCCCcceEEEEECCCCCEEEEecC---CCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCc
Confidence                   257899999999998877653   1122221122246678889999999999999999999998877666666


Q ss_pred             EEEEecCCEEEE
Q psy15995        365 VSCLWQGDYLLT  376 (683)
Q Consensus       365 ~~~~~~~~~l~~  376 (683)
                      +.+..+++..++
T Consensus       534 ~~y~~~G~qYv~  545 (582)
T 1flg_A          534 ITWEQDGEQYLG  545 (582)
T ss_dssp             EEEEETTEEEEE
T ss_pred             eEEEECCEEEEE
Confidence            666666654433

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.05  E-value=2.6e-08  Score=88.29  Aligned_cols=206  Identities=11%  Similarity=-0.009  Sum_probs=142.4

Q ss_pred             eecCCCcccCCCeEEEeeCCCCCeEEEec---CCeEEEEeCCCCcccccccCcc-cceEEEEECCCCcEE-EEecCCCCE
Q psy15995         35 IFATLPRTQRGQPIVLGGDPKGKNFLYTN---GNSVIIRNIENPAISDIYTEHS-CAVNVAKYSPSGFYI-ASGDISGKV  109 (683)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~s~~~~~l~~~~---~~~i~v~~~~~~~~~~~~~~h~-~~v~~~~~s~d~~~l-as~~~dg~i  109 (683)
                      +...+|........-++|+||++++++..   ++.|.+.|+++++.+..+.-.. .....+++.  ++.| ++.-.++.+
T Consensus        11 vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v   88 (266)
T 2iwa_A           11 VLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIG   88 (266)
T ss_dssp             EEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEE
T ss_pred             EEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEE
Confidence            33444444444556788999975555432   4799999999999887754211 122244544  4444 455678899


Q ss_pred             EEEeCCCcccccccccc-cCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCC--
Q psy15995        110 RIWDTVNKEHILKNEFH-PIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGG--  186 (683)
Q Consensus       110 ~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--  186 (683)
                      .++|..+.+.+.++... +                 ....+++||+.|+++..++.|.++|..+.+.+..........  
T Consensus        89 ~viD~~t~~v~~~i~~g~~-----------------~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~  151 (266)
T 2iwa_A           89 FIYDRRTLSNIKNFTHQMK-----------------DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRV  151 (266)
T ss_dssp             EEEETTTTEEEEEEECCSS-----------------SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEEC
T ss_pred             EEEECCCCcEEEEEECCCC-----------------CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccc
Confidence            99999999888776543 2                 124477788888877788999999999987766555443222  


Q ss_pred             -CeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecC-------------CcCeEEEEeecCCCeEEEEeeCCC
Q psy15995        187 -PIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQ-------------SKPINSCDFKPSRPFRIITGSEDN  252 (683)
Q Consensus       187 -~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~~~~~d~  252 (683)
                       .+..+.|. ++ .+.+..... ..+.+.+..+++.+..+.-.             ....+.++|+|+++.+++++...+
T Consensus       152 ~~~nele~~-dg-~lyvn~~~~-~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~  228 (266)
T 2iwa_A          152 IRLNELEYI-NG-EVWANIWQT-DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP  228 (266)
T ss_dssp             CCEEEEEEE-TT-EEEEEETTS-SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred             ccceeEEEE-CC-EEEEecCCC-CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence             36678888 66 455544332 24788899999988877532             135689999999988888888899


Q ss_pred             eEEEEcCCCC
Q psy15995        253 TIAVFEGPPF  262 (683)
Q Consensus       253 ~i~iw~~~~~  262 (683)
                      .+.+.++.+.
T Consensus       229 ~v~~i~l~~~  238 (266)
T 2iwa_A          229 KLFEIKLHLV  238 (266)
T ss_dssp             EEEEEEEEEC
T ss_pred             eEEEEEEecc
Confidence            9988886554

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.03  E-value=4.2e-08  Score=87.01  Aligned_cols=199  Identities=11%  Similarity=0.037  Sum_probs=138.6

Q ss_pred             cEEEEEEeCCCCEEEEEeC--CCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEE-cCCeEEEEeCCCCcccCC
Q psy15995        404 PITALALSPDRGTVFTGSH--DGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCG-IDDTIKQVDLSSNAYSGP  480 (683)
Q Consensus       404 ~v~~~~~~~~~~~l~~~~~--dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~~~~~~~~~~~~~  480 (683)
                      ....+.|+|++..+++.+.  ++.|.++|+.+++.......+.......+.+.++.++... .++.+.++|..+.+.   
T Consensus        22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v---   98 (266)
T 2iwa_A           22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSN---   98 (266)
T ss_dssp             CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEE---
T ss_pred             CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcE---
Confidence            3578999998654444443  5799999999999887765433334446777777776665 578999999887532   


Q ss_pred             ceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCccee
Q psy15995        481 EVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE  560 (683)
Q Consensus       481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  560 (683)
                                                        +..++.. ......+++|++.++++..++.|.++|..+.+......
T Consensus        99 ----------------------------------~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~  143 (266)
T 2iwa_A           99 ----------------------------------IKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHN  143 (266)
T ss_dssp             ----------------------------------EEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred             ----------------------------------EEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence                                              2233322 12334567788888888788999999999988766655


Q ss_pred             ecCC----cCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeee-----------cccEEEEEecCCCCe-EE
Q psy15995        561 LDHL----GPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFH-----------SAKVNCVAWSPDSAL-VA  624 (683)
Q Consensus       561 ~~~~----~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h-----------~~~v~~~~~s~d~~~-l~  624 (683)
                      .+..    ..+..+.|. +++..+....++.|.+.|..+++.+......+-           ....+.++|+|+++. ++
T Consensus       144 Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfV  222 (266)
T 2iwa_A          144 VKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFV  222 (266)
T ss_dssp             CEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEE
T ss_pred             ECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEE
Confidence            4421    236678888 776656665788999999999998766654311           135689999999865 55


Q ss_pred             EeecCCcEEEEeCCCCc
Q psy15995        625 SGSLDTTIIIWSLASPA  641 (683)
Q Consensus       625 ~~~~d~~v~iw~~~~~~  641 (683)
                      ++.....+++-++....
T Consensus       223 Tgk~~~~v~~i~l~~~~  239 (266)
T 2iwa_A          223 TGKLWPKLFEIKLHLVR  239 (266)
T ss_dssp             EETTCSEEEEEEEEECC
T ss_pred             ECCCCCeEEEEEEeccc
Confidence            56567888888876543

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.98  E-value=8.4e-07  Score=90.19  Aligned_cols=107  Identities=12%  Similarity=0.038  Sum_probs=65.7

Q ss_pred             CEEEEEcCCCcEEEEeCCCCeeEEeccCCccccC-------eEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEec
Q psy15995        285 SHFASAGFDGKVFLYDGASADLVSELGNPAHKGG-------VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMG  357 (683)
Q Consensus       285 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-------i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  357 (683)
                      ..+++++.++.|..+|..+|+.+..+........       -..+++  .+..++.++.++.|..+|..+++.+.+....
T Consensus        69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~  146 (582)
T 1flg_A           69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKFA  146 (582)
T ss_dssp             TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEECS
T ss_pred             CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecCC
Confidence            3455555544599999999998877654221110       012222  3567888889999999999999998887654


Q ss_pred             Ccc-----eeceEEEEe--cCC-EEEEEec------CCcEEEEecCCCCc
Q psy15995        358 NQV-----EDQQVSCLW--QGD-YLLTVSL------SGFISYLDVNNPST  393 (683)
Q Consensus       358 ~~~-----~~~~~~~~~--~~~-~l~~~~~------~g~i~~~~~~~~~~  393 (683)
                      ...     ....+....  +++ .++++..      ++.+.-+|..++..
T Consensus       147 ~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~  196 (582)
T 1flg_A          147 DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE  196 (582)
T ss_dssp             CGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred             CCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence            321     111111111  122 5666553      78899999887554

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=98.97  E-value=8.4e-05  Score=79.29  Aligned_cols=565  Identities=11%  Similarity=0.040  Sum_probs=296.8

Q ss_pred             CCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccc-cCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccc
Q psy15995         44 RGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIY-TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILK  122 (683)
Q Consensus        44 ~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~-~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~  122 (683)
                      .+.+.++.-..+|.+-+.+.+ -+..||-.+-+..... ......|.++....+|. |..|+.+| +..+|..+.+... 
T Consensus        21 ~n~V~~I~qD~~G~lWigT~~-GL~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigT~~G-l~~yd~~~~~f~~-   96 (758)
T 3ott_A           21 ASVVSCFLQDSEGLIWIGSNK-GLFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTY-LYMGTDNG-ILVYNYRADRYEQ-   96 (758)
T ss_dssp             CCCEEEEEECTTSCEEEEESS-CEEEECSSCEEECSCTTSTTSSCEEEEEEETTTE-EEEEETTE-EEEEETTTTEECC-
T ss_pred             cceEEEEEECCCCCEEEEECC-CccccCCCceEEEEccCCCCCceEEEEEEcCCCc-EEEEeCCC-eEEEeCCCCEEEC-
Confidence            467888888888876655544 4667774332211111 11245689988888774 44555555 8899987764321 


Q ss_pred             cccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccc--cccCCCeeEEEEcCCCCeE
Q psy15995        123 NEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEF--HPIGGPIKDIAWSPDNQRM  200 (683)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~i~~~~~s~~~~~l  200 (683)
                          +...         ....|..+.. .+|. |..++.+ -+..+|..+++.......  ......|.++...+++...
T Consensus        97 ----~~~~---------~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW  160 (758)
T 3ott_A           97 ----PETD---------FPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIY  160 (758)
T ss_dssp             ----CSCC---------CCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEE
T ss_pred             ----cccC---------CCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEE
Confidence                0000         0123555543 3554 3344444 578888876543211010  1113568888888877765


Q ss_pred             EEEecCCceEEEEEEccCCCceee-eec----CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCe
Q psy15995        201 VVVGEGRERFGHVFMSETGTSVGE-ISG----QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFV  275 (683)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v  275 (683)
                      +. ...+   +..++..+++.... ...    ....|.++...+++.. |..|+. +-+..++..+.+...........|
T Consensus       161 ig-t~~G---l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~-lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i  234 (758)
T 3ott_A          161 VG-TYNG---LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQC-VWIGTE-GYLFQYFPSTGQIKQTEAFHNNSI  234 (758)
T ss_dssp             EE-ETTE---EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTE-EEEEEE-EEEEEEETTTTEEEEEEEEEEEEE
T ss_pred             EE-eCCC---HhhCccCCCceEEecCCCccccccceeEEEEEECCCCE-EEEEEC-CCCeEEcCCCCeEEeccCCCCCeE
Confidence            54 3321   34455444432111 111    1234788888777653 444554 457888877665433222224468


Q ss_pred             EEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC-----ccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCce
Q psy15995        276 QAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP-----AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSV  350 (683)
Q Consensus       276 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  350 (683)
                      .++...++|.+.+ |+. +-+.+++..+++........     -....|.++....++. |..|+..| +.++... . .
T Consensus       235 ~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~~-~-~  308 (758)
T 3ott_A          235 KSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRYN-S-A  308 (758)
T ss_dssp             EEEEECTTCCEEE-EET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-EEEECCC-C--
T ss_pred             EEEEEcCCCCEEE-EeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-ccccccC-C-c
Confidence            8888888887554 444 45888887766543322110     1335688988887776 55566666 5544322 1 1


Q ss_pred             eeEEEecC----cceeceEEEEe-cCCEEEEEecCCcEEEEecCCCCc-ceeeee-------eccccEEEEEEeCCCCEE
Q psy15995        351 VSEFIMGN----QVEDQQVSCLW-QGDYLLTVSLSGFISYLDVNNPST-PIRVIK-------GHNKPITALALSPDRGTV  417 (683)
Q Consensus       351 ~~~~~~~~----~~~~~~~~~~~-~~~~l~~~~~~g~i~~~~~~~~~~-~~~~~~-------~~~~~v~~~~~~~~~~~l  417 (683)
                      ...+....    .......++.. ....+.+|+.+| +..++...... ....+.       .....|.++.-.++++.-
T Consensus       309 ~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW  387 (758)
T 3ott_A          309 LQFIPISQITGTGDGNQFYSLFRDSKGFYWFGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLW  387 (758)
T ss_dssp             CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEE
T ss_pred             eeEEecccCCCCCCCceEEEEEEcCCCCEEEeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEE
Confidence            12221110    00111222222 234455566544 55665543211 111111       112458888887777655


Q ss_pred             EEEeCCCcEEEEcCCCCCcceeccCC-----CCcceeEEEEe-CCeEEEEEcCCeEEEEeCCCCcccC-CceecCCCCce
Q psy15995        418 FTGSHDGFITRWNAKTGENDRVQGAG-----HGNQINGMKAT-GELLYTCGIDDTIKQVDLSSNAYSG-PEVKLGSQPRG  490 (683)
Q Consensus       418 ~~~~~dg~i~~w~~~~~~~~~~~~~~-----~~~~v~~~~~~-~~~l~~~~~d~~i~~~~~~~~~~~~-~~~~~~~~~~~  490 (683)
                      + |+ ++-+..+|..+++........     ....|.++..+ ...|..++..+-+..++..+..... ......     
T Consensus       388 i-gt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~-----  460 (758)
T 3ott_A          388 I-AT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAE-----  460 (758)
T ss_dssp             E-EE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECS-----
T ss_pred             E-Ee-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecc-----
Confidence            4 44 456889998876544322111     23457777776 5678888877778888744210000 000000     


Q ss_pred             eeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCccee--ecCCcCee
Q psy15995        491 LDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE--LDHLGPVT  568 (683)
Q Consensus       491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~v~  568 (683)
                                      ..+....   .+ ....+.++...+++.+.+.++..+-+..+|..+++......  ......+.
T Consensus       461 ----------------~~~~~~~---~l-~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~  520 (758)
T 3ott_A          461 ----------------QNYSVHN---GL-SGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPN  520 (758)
T ss_dssp             ----------------EEECGGG---TC-SCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEE
T ss_pred             ----------------ccccccc---cc-ccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccc
Confidence                            0000000   00 11246778888888877644444558889987765442211  11134678


Q ss_pred             EEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeec
Q psy15995        569 DCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKN  648 (683)
Q Consensus       569 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~  648 (683)
                      ++....+|.+.+.. ..| +..|+..+++.......+.....|.++... +|++ -.++.+| +..++..+.+... ...
T Consensus       521 ~i~~d~~g~lWigt-~~G-l~~~~~~~~~~~~~~~~gl~~~~i~~i~~~-~g~l-Wi~t~~G-l~~~~~~~~~~~~-~~~  594 (758)
T 3ott_A          521 YLLCDEDGLLWVGF-HGG-VMRINPKDESQQSISFGSFSNNEILSMTCV-KNSI-WVSTTNG-LWIIDRKTMDARQ-QNM  594 (758)
T ss_dssp             EEEECTTSCEEEEE-TTE-EEEECC--CCCCBCCCCC---CCEEEEEEE-TTEE-EEEESSC-EEEEETTTCCEEE-C--
T ss_pred             eEEECCCCCEEEEe-cCc-eEEEecCCCceEEecccCCCccceEEEEEC-CCCE-EEECCCC-eEEEcCCCceeEE-ecC
Confidence            88888888877654 444 888887766543321111134567888764 5654 4445555 8888887765432 111


Q ss_pred             CCCCCCeeEEEEc-cCCeEEEeeCCCcEE
Q psy15995        649 AHPQSQITRLQWL-DNDLLVSVGQDCNTK  676 (683)
Q Consensus       649 ~~~~~~v~~l~~~-~~~~l~s~~~d~~v~  676 (683)
                        ....+....+. .++.|.-|+.+|-+.
T Consensus       595 --~~~~~~~~~~~~~~G~l~fG~~~Gl~~  621 (758)
T 3ott_A          595 --TNKRFTSLLFDPKEDCVYLGGADGFGI  621 (758)
T ss_dssp             --CCCCCSEEEEETTTTEEEEECBSEEEE
T ss_pred             --CCCceeeeEEECCCCcEEEecCCceEE
Confidence              22344455544 466788888888543

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.95  E-value=2.1e-07  Score=81.24  Aligned_cols=184  Identities=11%  Similarity=0.150  Sum_probs=132.2

Q ss_pred             ceeeeEeeccceEEEeecCCc--cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC
Q psy15995        143 SIRNILVLSIGFYIASGDISG--KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT  220 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~  220 (683)
                      ....+.|+ ++.+..+.+.+|  .|+++|+.+++.+....+.   .........+++..|..+.... ..+.+++.++.+
T Consensus        44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~---~~~FgeGit~~g~~ly~ltw~~-~~v~v~D~~t~~  118 (262)
T 3nol_A           44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG---KRYFGEGISDWKDKIVGLTWKN-GLGFVWNIRNLR  118 (262)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC---TTCCEEEEEEETTEEEEEESSS-SEEEEEETTTCC
T ss_pred             ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC---CccceeEEEEeCCEEEEEEeeC-CEEEEEECccCc
Confidence            35778888 677777777765  8999999999987766554   4444544555677887776543 347899999999


Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccc-----cCeEEEEECCCCCEEEEEcCCCc
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS-----RFVQAVRYSPSGSHFASAGFDGK  295 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~dg~  295 (683)
                      .+.++.-....   ..+++++.. |+.+..++.|.++|..+.+....+.-..     ..++.+.|. +|+..+..-.+..
T Consensus       119 ~~~ti~~~~eG---~glt~dg~~-L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~  193 (262)
T 3nol_A          119 QVRSFNYDGEG---WGLTHNDQY-LIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNK  193 (262)
T ss_dssp             EEEEEECSSCC---CCEEECSSC-EEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred             EEEEEECCCCc---eEEecCCCE-EEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCe
Confidence            99888764322   333456664 6666667899999999998887765321     334567776 6766665556889


Q ss_pred             EEEEeCCCCeeEEeccCCcc----------ccCeEEEEEccCCCEEEEEEC
Q psy15995        296 VFLYDGASADLVSELGNPAH----------KGGVYAVAWKPDGTQLLTASG  336 (683)
Q Consensus       296 i~iw~~~~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~l~~~~~  336 (683)
                      |.+.|.++++.+..+...+-          ..-...|+|+|+++.|++.+.
T Consensus       194 I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK  244 (262)
T 3nol_A          194 IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK  244 (262)
T ss_dssp             EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred             EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence            99999999999888765321          235689999999888887775

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.93  E-value=8.1e-05  Score=76.24  Aligned_cols=462  Identities=11%  Similarity=0.038  Sum_probs=248.0

Q ss_pred             CCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecC
Q psy15995        161 ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPS  240 (683)
Q Consensus       161 ~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  240 (683)
                      ....|+..++.+........+.. -..+..++|.+++..++.+...... +.....+.......+.........+++.+.
T Consensus        13 ~~~~I~~i~l~~~~~~~~~~~~~-~~~~~~l~~d~~~~~lywtD~~~~~-I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~   90 (628)
T 4a0p_A           13 RRADIRRISLETNNNNVAIPLTG-VKEASALDFDVTDNRIYWTDISLKT-ISRAFMNGSALEHVVEFGLDYPEGMAVDWL   90 (628)
T ss_dssp             ETTEEEEEESSCTTCEEECCCCS-CSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEECSSCSCCCEEEEETT
T ss_pred             eCCcEEEEECCCCCcceEEEcCC-CCceEEEEEECCCCEEEEEECCCCe-EEEEECCCCCcEEEEeCCCCCcceEEEEeC
Confidence            45678888887654322222222 2467899999998888887765443 344444433333333333356778999987


Q ss_pred             CCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC--CCcEEEEeCCCCeeEEeccCCccccC
Q psy15995        241 RPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF--DGKVFLYDGASADLVSELGNPAHKGG  318 (683)
Q Consensus       241 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~  318 (683)
                      +..+.++-...+.|.+.++............-.....+++.|....|+....  .+.|...++..........   .-..
T Consensus        91 ~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~---~~~~  167 (628)
T 4a0p_A           91 GKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP---NVGR  167 (628)
T ss_dssp             TTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC---SCSS
T ss_pred             CCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC---CCCC
Confidence            7765677777889999997654433333334456789999996656665542  5678888876544333332   3456


Q ss_pred             eEEEEEccCCCEEEEEEC-CCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEe-cCCcEEEEecCCCCccee
Q psy15995        319 VYAVAWKPDGTQLLTASG-DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVS-LSGFISYLDVNNPSTPIR  396 (683)
Q Consensus       319 i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~i~~~~~~~~~~~~~  396 (683)
                      ...++++++++.|+.+.. .+.|...|+..... ..+. ........+++  .++.++... ..+.|...|...+.... 
T Consensus       168 P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~-~~l~~P~glav--~~~~ly~tD~~~~~I~~~dk~tg~~~~-  242 (628)
T 4a0p_A          168 ANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIA-DDLPHPFGLTQ--YQDYIYWTDWSRRSIERANKTSGQNRT-  242 (628)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEE-ECCSCEEEEEE--ETTEEEEEETTTTEEEEEETTTCCSCE-
T ss_pred             cceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEee-ccCCCceEEEE--ECCEEEEecCCCCEEEEEECCCCCceE-
Confidence            789999998777776654 56789999875443 2222 22222233333  345555554 46677777754432211 


Q ss_pred             eeee-----------cc-------------ccEEEEEE----------eC-------CC-------CEEEEEeCCCcEEE
Q psy15995        397 VIKG-----------HN-------------KPITALAL----------SP-------DR-------GTVFTGSHDGFITR  428 (683)
Q Consensus       397 ~~~~-----------~~-------------~~v~~~~~----------~~-------~~-------~~l~~~~~dg~i~~  428 (683)
                      .+..           |.             +....++.          .|       |+       .+|+.+ ....|+-
T Consensus       243 ~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s-~~~~i~~  321 (628)
T 4a0p_A          243 IIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFS-QKSAINR  321 (628)
T ss_dssp             EEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEE-ETTEEEE
T ss_pred             EEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeee-ccceEEE
Confidence            1100           10             01111111          11       11       122222 1233444


Q ss_pred             EcCCCCCc-ceeccCCCCcceeEEEEe--CCeEEEEE-cCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEec
Q psy15995        429 WNAKTGEN-DRVQGAGHGNQINGMKAT--GELLYTCG-IDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVK  504 (683)
Q Consensus       429 w~~~~~~~-~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (683)
                      ..+..... ...........+.++.++  ++.|+-+. ..+.|+.+++.......                         
T Consensus       322 i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~-------------------------  376 (628)
T 4a0p_A          322 MVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFT-------------------------  376 (628)
T ss_dssp             ECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-------------------------
T ss_pred             EecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceE-------------------------
Confidence            44332211 111111222345566666  34444433 35566666654321100                         


Q ss_pred             eEEEEeCCceeeeecCCCCCcEEEEccCCCEEE-EEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEe
Q psy15995        505 QISIVENGAKVSSLPIDYEPSSISLDHEHGLVA-VGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASD  583 (683)
Q Consensus       505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~  583 (683)
                         +....  .........+..+++...++.|. +-...+.|.+.+++.... .............+++.|...+|..+.
T Consensus       377 ---v~~~~--~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~-~~l~~~~l~~Pr~iavdp~~g~ly~tD  450 (628)
T 4a0p_A          377 ---VVVSS--VPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSV-GVVLKGEQDRPRAVVVNPEKGYMYFTN  450 (628)
T ss_dssp             ---EEC----------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEE-EEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred             ---EEEcc--cccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeE-EEEEeCCCCceeeEEEecCCCeEEEee
Confidence               00000  00000122467899998866554 556678899999875432 222223456789999999544554443


Q ss_pred             C-CC--eEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeec-CCcEEEEeCCCCceeeEeecCCCCCCeeEEE
Q psy15995        584 A-HR--KVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSL-DTTIIIWSLASPAKHIIIKNAHPQSQITRLQ  659 (683)
Q Consensus       584 ~-d~--~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~-d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~  659 (683)
                      . ..  .|...++.......... . .-...+.|++.++++.|..+.. .+.|...+++... ...+... ......+|+
T Consensus       451 ~g~~~~~I~r~~~dG~~~~~l~~-~-~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~-r~~~~~~-~~~~P~gla  526 (628)
T 4a0p_A          451 LQERSPKIERAALDGTEREVLFF-S-GLSKPIALALDSRLGKLFWADSDLRRIESSDLSGAN-RIVLEDS-NILQPVGLT  526 (628)
T ss_dssp             EETTEEEEEEEETTSCSCEEEEC-S-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECS-SCSCEEEEE
T ss_pred             cCCCCCeEEEEeCCCCCcEEEEe-c-cCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCc-eEEEEcC-CCCCcEEEE
Confidence            2 22  57777776443321111 0 2345789999998776666544 5789999985544 3333211 234567777


Q ss_pred             EccCCeEEE
Q psy15995        660 WLDNDLLVS  668 (683)
Q Consensus       660 ~~~~~~l~s  668 (683)
                      ...+.++.+
T Consensus       527 v~~~~ly~t  535 (628)
T 4a0p_A          527 VFENWLYWI  535 (628)
T ss_dssp             EETTEEEEE
T ss_pred             EECCEEEEE
Confidence            655444444

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.90  E-value=2.5e-07  Score=97.93  Aligned_cols=246  Identities=7%  Similarity=-0.048  Sum_probs=134.0

Q ss_pred             CeEEEeeC-CCCCeEEEecC--C----eEEEEeCCCC-ccccc-ccCcccceEEEEECCCCcEEEEecCC-----CCEEE
Q psy15995         46 QPIVLGGD-PKGKNFLYTNG--N----SVIIRNIENP-AISDI-YTEHSCAVNVAKYSPSGFYIASGDIS-----GKVRI  111 (683)
Q Consensus        46 ~~~~~~~s-~~~~~l~~~~~--~----~i~v~~~~~~-~~~~~-~~~h~~~v~~~~~s~d~~~las~~~d-----g~i~i  111 (683)
                      .....+|| |||++||++.+  |    .|+++|++++ +.+.. +   ......++|+|||+.|+....+     ..|.+
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~---~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~  251 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV---SGTNGEIVWGPDHTSLFYVTKDETLRENKVWR  251 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE---EEECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc---cCceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence            34567899 99999999742  2    4999999998 64321 2   1224578999999988876654     25888


Q ss_pred             EeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec---CCccEEEEeccccceee--eccccccCC
Q psy15995        112 WDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD---ISGKVRIWDTVNKEHIL--KNEFHPIGG  186 (683)
Q Consensus       112 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~d~~i~iwd~~~~~~~~--~~~~~~~~~  186 (683)
                      +++.++.....+-....           .......+.++|||++|+...   ....|.++|+.++....  ........+
T Consensus       252 ~~lgt~~~~~~lv~~~~-----------~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~  320 (751)
T 2xe4_A          252 HVMGKLQSEDVCLYEEH-----------NPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKG  320 (751)
T ss_dssp             EETTSCGGGCEEEEECC-----------CTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTT
T ss_pred             EECCCCchhcEEEEecC-----------CCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCC
Confidence            88876532111111100           002245678999999888755   34568889998753111  111222234


Q ss_pred             CeeEEEEcCCCCeEEEEecCC---ceEEEEEEccCCCceee-eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEE--cC-
Q psy15995        187 PIKDIAWSPDNQRMVVVGEGR---ERFGHVFMSETGTSVGE-ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVF--EG-  259 (683)
Q Consensus       187 ~i~~~~~s~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw--~~-  259 (683)
                      ...++.|+. |+.++..+...   ...+..++.+++..... +..+...+.--.+.+.+..++++...++..++|  ++ 
T Consensus       321 ~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl~  399 (751)
T 2xe4_A          321 VRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMAD  399 (751)
T ss_dssp             CCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEECC
T ss_pred             ceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEecc
Confidence            445555443 66666665442   22334444443223333 444444433334444566667778888865554  54 


Q ss_pred             ------CCCceeeeccc-cccCeEEEEE----CCCCC-EEEEEcCC---CcEEEEeCCCCee
Q psy15995        260 ------PPFKFKMTKQE-HSRFVQAVRY----SPSGS-HFASAGFD---GKVFLYDGASADL  306 (683)
Q Consensus       260 ------~~~~~~~~~~~-~~~~v~~~~~----~~~~~-~l~~~~~d---g~i~iw~~~~~~~  306 (683)
                            ..++....+.. ....+..+.+    +++++ ++++.+..   +.+..+|+.+++.
T Consensus       400 ~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~  461 (751)
T 2xe4_A          400 SQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR  461 (751)
T ss_dssp             TTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred             cccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence                  33331222221 1122333332    34555 44443332   4577778776653

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.90  E-value=3.3e-07  Score=80.00  Aligned_cols=184  Identities=9%  Similarity=0.034  Sum_probs=128.3

Q ss_pred             EEEEEEeCCCCEEEEEeCCC--cEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEE-cCCeEEEEeCCCCcccCCc
Q psy15995        405 ITALALSPDRGTVFTGSHDG--FITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCG-IDDTIKQVDLSSNAYSGPE  481 (683)
Q Consensus       405 v~~~~~~~~~~~l~~~~~dg--~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~~~~~~~~~~~~~~  481 (683)
                      ...+.|+ ++.++.+.+.+|  .|+.+|+.+++...........--..+...++.|+... .++.+.++|..+.+     
T Consensus        45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~-----  118 (262)
T 3nol_A           45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR-----  118 (262)
T ss_dssp             EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCC-----
T ss_pred             cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCc-----
Confidence            4788898 666666777766  89999999999887775443333345777777777665 48899999988753     


Q ss_pred             eecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceee
Q psy15995        482 VKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL  561 (683)
Q Consensus       482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  561 (683)
                                                      .+..++....-  ..++++++.|+....++.|.++|..+.+.......
T Consensus       119 --------------------------------~~~ti~~~~eG--~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V  164 (262)
T 3nol_A          119 --------------------------------QVRSFNYDGEG--WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV  164 (262)
T ss_dssp             --------------------------------EEEEEECSSCC--CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred             --------------------------------EEEEEECCCCc--eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence                                            23333333322  34446778788777788899999999887766554


Q ss_pred             cC-C---cCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceee----------ecccEEEEEecCCCCeEEEee
Q psy15995        562 DH-L---GPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGF----------HSAKVNCVAWSPDSALVASGS  627 (683)
Q Consensus       562 ~~-~---~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~----------h~~~v~~~~~s~d~~~l~~~~  627 (683)
                      .. .   ..++.+.+. +|+..+..-.++.|.+.|..+++........+          .....+.|||+|+++.|.+.+
T Consensus       165 ~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG  243 (262)
T 3nol_A          165 TAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG  243 (262)
T ss_dssp             EETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred             ccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence            31 2   234457776 77766666678899999999998876554321          123568999999988887776


Q ss_pred             cC
Q psy15995        628 LD  629 (683)
Q Consensus       628 ~d  629 (683)
                      ..
T Consensus       244 K~  245 (262)
T 3nol_A          244 KL  245 (262)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.89  E-value=5.8e-06  Score=78.35  Aligned_cols=246  Identities=7%  Similarity=-0.120  Sum_probs=152.7

Q ss_pred             CeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEE-EecCCCCEEEEeCCCcccccccc
Q psy15995         46 QPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIA-SGDISGKVRIWDTVNKEHILKNE  124 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~la-s~~~dg~i~iwd~~~~~~~~~~~  124 (683)
                      ..+|.+..+ ..+|.++..+.|+..++.+......+.+ ...+..++|++.+..|. +-...+.|..+++..........
T Consensus        35 ~~~C~~~~~-~~~ll~~~~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~  112 (349)
T 3v64_C           35 RRSCKALGP-EPVLLFANRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS  112 (349)
T ss_dssp             SSCEEESSS-CCEEEEECBSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred             CCccccccc-CceeEeecccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe
Confidence            445666666 5577777778899999887665444443 34578999997655554 44466789999987653221111


Q ss_pred             cccCCCCcccceeeeeecceeeeEeecc-ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEE
Q psy15995        125 FHPIGGPIKDIGTLLSLTSIRNILVLSI-GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV  203 (683)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  203 (683)
                      ..              ......+++.+. +...++-...+.|.+.++.......  ...........+++.|.+..++.+
T Consensus       113 ~~--------------~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~--l~~~~l~~P~~iavdp~~g~ly~t  176 (349)
T 3v64_C          113 TG--------------LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV--LLWQSLEKPRAIALHPMEGTIYWT  176 (349)
T ss_dssp             SS--------------CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE--EECTTCSCEEEEEEETTTTEEEEE
T ss_pred             CC--------------CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE--EEeCCCCCcceEEEecCcCeEEEe
Confidence            10              134567888874 4555555667889999987643221  122223567899999988888877


Q ss_pred             ecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCC
Q psy15995        204 GEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPS  283 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~  283 (683)
                      .......+...+.+...........-...+.++++|++..+.++-...+.|..++.........+.........+++ .+
T Consensus       177 d~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~  255 (349)
T 3v64_C          177 DWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FE  255 (349)
T ss_dssp             ECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ET
T ss_pred             ccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-EC
Confidence            66542334444444322222223344567899999987765666667788999997654333333333445667777 34


Q ss_pred             CCEEEEEcCCCcEEEEeCCCCeeEEec
Q psy15995        284 GSHFASAGFDGKVFLYDGASADLVSEL  310 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~~~~~~~~~~  310 (683)
                      +..+++-...+.|..++..+++....+
T Consensus       256 ~~ly~td~~~~~V~~~~~~~G~~~~~i  282 (349)
T 3v64_C          256 DSLYWTDWHTKSINSANKFTGKNQEII  282 (349)
T ss_dssp             TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred             CEEEEecCCCCeEEEEEccCCCccEEe
Confidence            445555555677888876666555444

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.88  E-value=4.9e-06  Score=80.14  Aligned_cols=245  Identities=7%  Similarity=-0.124  Sum_probs=153.2

Q ss_pred             EEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEE-EEecCCCCEEEEeCCCcccccccccc
Q psy15995         48 IVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEHILKNEFH  126 (683)
Q Consensus        48 ~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l-as~~~dg~i~iwd~~~~~~~~~~~~~  126 (683)
                      .|.+..+ ..+|.++..+.|+..++.+......+.+ ...+..++|++.+..| ++-...+.|..+++........+...
T Consensus        80 ~C~~~~~-~~~l~~~~~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~  157 (386)
T 3v65_B           80 SCKALGP-EPVLLFANRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG  157 (386)
T ss_dssp             CEEECSS-CCEEEEECBSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS
T ss_pred             eECCccc-cceeEeecCccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC
Confidence            3444555 5577777778899999987765544443 3457899999755555 45456678999998765322111111


Q ss_pred             cCCCCcccceeeeeecceeeeEeecc-ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEec
Q psy15995        127 PIGGPIKDIGTLLSLTSIRNILVLSI-GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE  205 (683)
Q Consensus       127 ~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  205 (683)
                                    ......+++.+. +...++-...+.|.+.++.......  ...........+++.|++..|+.+..
T Consensus       158 --------------~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~--l~~~~l~~P~giavdp~~g~ly~td~  221 (386)
T 3v65_B          158 --------------LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV--LLWQSLEKPRAIALHPMEGTIYWTDW  221 (386)
T ss_dssp             --------------CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE--EECSSCSCEEEEEEETTTTEEEEEEC
T ss_pred             --------------CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE--eecCCCCCCcEEEEEcCCCeEEEecc
Confidence                          134567888874 4455555667788888887543221  12222356789999998888887765


Q ss_pred             CCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCC
Q psy15995        206 GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGS  285 (683)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~  285 (683)
                      .....+...+.+...........-...+.++++|++..+.++-...+.|..++.........+.........+++ .++.
T Consensus       222 ~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~  300 (386)
T 3v65_B          222 GNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDS  300 (386)
T ss_dssp             SSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTE
T ss_pred             CCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCE
Confidence            542334444444332222223344567899999887766667677889999997654433333333445677777 3444


Q ss_pred             EEEEEcCCCcEEEEeCCCCeeEEecc
Q psy15995        286 HFASAGFDGKVFLYDGASADLVSELG  311 (683)
Q Consensus       286 ~l~~~~~dg~i~iw~~~~~~~~~~~~  311 (683)
                      .+++-...+.|..++..+++....+.
T Consensus       301 ly~td~~~~~V~~~~~~~G~~~~~i~  326 (386)
T 3v65_B          301 LYWTDWHTKSINSANKFTGKNQEIIR  326 (386)
T ss_dssp             EEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             EEEeeCCCCeEEEEECCCCcceEEEc
Confidence            55555667788888866666555554

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.87  E-value=2.2e-06  Score=80.76  Aligned_cols=243  Identities=11%  Similarity=0.053  Sum_probs=148.6

Q ss_pred             cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCC------------------CCcceeEEEEe--CCeEEEEEc
Q psy15995        404 PITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAG------------------HGNQINGMKAT--GELLYTCGI  463 (683)
Q Consensus       404 ~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~------------------~~~~v~~~~~~--~~~l~~~~~  463 (683)
                      ...+++++++++.++++..++.|..|+..+++........                  .......+.++  +..|+.+..
T Consensus        20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~   99 (322)
T 2fp8_A           20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC   99 (322)
T ss_dssp             CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred             CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence            4567889999987888888999999998765443221000                  01245677776  467777766


Q ss_pred             CCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEcc-CCCEEEEEcC-
Q psy15995        464 DDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDH-EHGLVAVGGA-  541 (683)
Q Consensus       464 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~-  541 (683)
                      .+.+..++..+........                          ...+.      ....+..+++.+ +|++.++-.. 
T Consensus       100 ~~~i~~~d~~~g~~~~~~~--------------------------~~~~~------~~~~p~~i~~d~~~G~l~v~d~~~  147 (322)
T 2fp8_A          100 YYHLSVVGSEGGHATQLAT--------------------------SVDGV------PFKWLYAVTVDQRTGIVYFTDVST  147 (322)
T ss_dssp             TTEEEEECTTCEECEEEES--------------------------EETTE------ECSCEEEEEECTTTCCEEEEESCS
T ss_pred             CCCEEEEeCCCCEEEEecc--------------------------cCCCC------cccccceEEEecCCCEEEEECCcc
Confidence            6667777765432100000                          00000      012356788999 8877666432 


Q ss_pred             ----------------CCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEE-eCCCeEEEEECCCCccccccce
Q psy15995        542 ----------------DSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVAS-DAHRKVVLYRVPDFELAHNKEW  604 (683)
Q Consensus       542 ----------------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~  604 (683)
                                      ++.|..||..+++....  .........++++|++++|..+ ...+.|.+|++.+...-....+
T Consensus       148 ~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~--~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~  225 (322)
T 2fp8_A          148 LYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL--LKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVL  225 (322)
T ss_dssp             SCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE--EEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEE
T ss_pred             cccccccceehcccCCCceEEEEeCCCCEEEEe--ccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceE
Confidence                            36788888876654311  1122345679999999977665 4568999999875322111111


Q ss_pred             eeecccEEEEEecCCCCeEEEeec----------CCcEEEEeCCCCceeeEeecCC--CCCCeeEEEEccCCeEEEeeCC
Q psy15995        605 GFHSAKVNCVAWSPDSALVASGSL----------DTTIIIWSLASPAKHIIIKNAH--PQSQITRLQWLDNDLLVSVGQD  672 (683)
Q Consensus       605 ~~h~~~v~~~~~s~d~~~l~~~~~----------d~~v~iw~~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~l~s~~~d  672 (683)
                      ....+ ...+++.++|++.++...          .+.|..++.. ++....+....  ....++.+++.++.++++....
T Consensus       226 ~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~  303 (322)
T 2fp8_A          226 VKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFH  303 (322)
T ss_dssp             EECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSC
T ss_pred             EeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEeCCEEEEeecCC
Confidence            11223 788999999987777654          4668888864 55555553311  1245777877666666676678


Q ss_pred             CcEEEEeecc
Q psy15995        673 CNTKIWEIAP  682 (683)
Q Consensus       673 ~~v~vw~~~~  682 (683)
                      +.|..++++.
T Consensus       304 ~~i~~~~~~~  313 (322)
T 2fp8_A          304 GSVGILVYDK  313 (322)
T ss_dssp             SEEEEEEC--
T ss_pred             CceEEEeccc
Confidence            8899988763

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.85  E-value=7.4e-07  Score=93.03  Aligned_cols=276  Identities=13%  Similarity=0.092  Sum_probs=156.0

Q ss_pred             EEEeeCC-CCCeEEEecC------------CeEEEEeCCCCccccc--cc-CcccceEEEEECCCCcEEEEec-CCCCEE
Q psy15995         48 IVLGGDP-KGKNFLYTNG------------NSVIIRNIENPAISDI--YT-EHSCAVNVAKYSPSGFYIASGD-ISGKVR  110 (683)
Q Consensus        48 ~~~~~s~-~~~~l~~~~~------------~~i~v~~~~~~~~~~~--~~-~h~~~v~~~~~s~d~~~las~~-~dg~i~  110 (683)
                      ...++.| +|++++++..            ..+.+||..+++-...  +. .+.....++++..+|+.++.|+ .+..+.
T Consensus       189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~  268 (656)
T 1k3i_A          189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS  268 (656)
T ss_dssp             SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred             eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence            3556677 8998888631            1689999988764322  21 1233334578889999999988 445799


Q ss_pred             EEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec-CC-----ccEEEEeccccceeeeccc--c
Q psy15995        111 IWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD-IS-----GKVRIWDTVNKEHILKNEF--H  182 (683)
Q Consensus       111 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d-----~~i~iwd~~~~~~~~~~~~--~  182 (683)
                      +||..+.+....-...             ....-...++.++|+.++.|+ .+     ..+.+||..+++-......  .
T Consensus       269 ~yd~~t~~W~~~~~~~-------------~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~  335 (656)
T 1k3i_A          269 LYDSSSDSWIPGPDMQ-------------VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVN  335 (656)
T ss_dssp             EEEGGGTEEEECCCCS-------------SCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSG
T ss_pred             EecCcCCceeECCCCC-------------ccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccc
Confidence            9998876433211110             002223455667899888888 34     5699999987653221000  0


Q ss_pred             ccCCCeeEEEEcCCCCeEEEEecCC-------ceEEEEEEccCCCceeeeecCCc---------CeEEEEeecCCCeEEE
Q psy15995        183 PIGGPIKDIAWSPDNQRMVVVGEGR-------ERFGHVFMSETGTSVGEISGQSK---------PINSCDFKPSRPFRII  246 (683)
Q Consensus       183 ~~~~~i~~~~~s~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~l~  246 (683)
                      +....-....+..++...++++.++       ...+..++.++.........+..         .-.++.|...+..+++
T Consensus       336 p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v  415 (656)
T 1k3i_A          336 PMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILT  415 (656)
T ss_dssp             GGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEE
T ss_pred             ccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEE
Confidence            0000101122334555445444322       12245566555443322222211         2344455443344577


Q ss_pred             EeeCCC-----------eEEEEcCCCCceeeec--ccccc-CeEEEEECCCCCEEEEEcCC-----------CcEEEEeC
Q psy15995        247 TGSEDN-----------TIAVFEGPPFKFKMTK--QEHSR-FVQAVRYSPSGSHFASAGFD-----------GKVFLYDG  301 (683)
Q Consensus       247 ~~~~d~-----------~i~iw~~~~~~~~~~~--~~~~~-~v~~~~~~~~~~~l~~~~~d-----------g~i~iw~~  301 (683)
                      .|+.++           .+.+||..+.+.....  ..+.. .-.+++..|+++.++.|+.+           ..+.+||.
T Consensus       416 ~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp  495 (656)
T 1k3i_A          416 FGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVP  495 (656)
T ss_dssp             ECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEG
T ss_pred             EeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcC
Confidence            777532           6788887776654432  22222 23455677899999998854           46899999


Q ss_pred             CCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC
Q psy15995        302 ASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG  336 (683)
Q Consensus       302 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  336 (683)
                      .+.+....-..+.......+..+.|+++.++.|+.
T Consensus       496 ~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          496 EQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             GGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             CCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence            88765543222222223334556789999998885

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=98.79  E-value=0.00037  Score=74.38  Aligned_cols=520  Identities=11%  Similarity=0.071  Sum_probs=274.5

Q ss_pred             ccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCcc
Q psy15995         85 SCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGK  164 (683)
Q Consensus        85 ~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~  164 (683)
                      ...|++|.-..+|. |-.|..+| +..+|-.+-+...   ...   .       .....|.++....+|.. -.|+.+| 
T Consensus        21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~~~~~~---~~~---~-------~~~~~i~~i~~d~~g~l-WigT~~G-   83 (758)
T 3ott_A           21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYSTQQHF---TYG---E-------NNNTRIYCGVIIDNTYL-YMGTDNG-   83 (758)
T ss_dssp             CCCEEEEEECTTSC-EEEEESSC-EEEECSSCEEECS---CTT---S-------TTSSCEEEEEEETTTEE-EEEETTE-
T ss_pred             cceEEEEEECCCCC-EEEEECCC-ccccCCCceEEEE---ccC---C-------CCCceEEEEEEcCCCcE-EEEeCCC-
Confidence            45799999998884 44555666 6677743321111   000   0       01145777777777754 4444455 


Q ss_pred             EEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeee-----ecCCcCeEEEEeec
Q psy15995        165 VRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEI-----SGQSKPINSCDFKP  239 (683)
Q Consensus       165 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~  239 (683)
                      +..||..+.+...  ........|.++.. .++ .+.+++.++   +..++.++++.. .+     ......|.++....
T Consensus        84 l~~yd~~~~~f~~--~~~~~~~~i~~i~~-~~g-~lWigt~~G---l~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~  155 (758)
T 3ott_A           84 ILVYNYRADRYEQ--PETDFPTDVRTMAL-QGD-TLWLGALNG---LYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTK  155 (758)
T ss_dssp             EEEEETTTTEECC--CSCCCCSCEEEEEE-ETT-EEEEEETTE---EEEEETTTCCEE-EECHHHHCCSCSCEEEEEECT
T ss_pred             eEEEeCCCCEEEC--cccCCCceEEEEEe-cCC-cEEEEcCCc---ceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcC
Confidence            7889987764322  11112235666654 344 455555442   455555544322 22     11234688888887


Q ss_pred             CCCeEEEEeeCCCeEEEEcCCCCceeeec-cc----cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCc
Q psy15995        240 SRPFRIITGSEDNTIAVFEGPPFKFKMTK-QE----HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPA  314 (683)
Q Consensus       240 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~  314 (683)
                      ++.  +..++.+ -+..++..+.+..... ..    ....|.++...+++..|..|+. +-+..++..+++.......  
T Consensus       156 ~g~--lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l--  229 (758)
T 3ott_A          156 DNQ--IYVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAF--  229 (758)
T ss_dssp             TCC--EEEEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEE--
T ss_pred             CCC--EEEEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCC--
Confidence            876  4445554 4777887665543211 11    1234888888877775555664 4588899877654332211  


Q ss_pred             cccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecC----cc-eeceEEEEec-CCEEEEEecCCcEEEEec
Q psy15995        315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGN----QV-EDQQVSCLWQ-GDYLLTVSLSGFISYLDV  388 (683)
Q Consensus       315 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~-~~~~~~~~~~-~~~l~~~~~~g~i~~~~~  388 (683)
                      ....|.++...+++.+. .++.+ -+.+++..+++.. .+....    .. .....++..+ ...+-+|+..| +.++..
T Consensus       230 ~~~~i~~i~~d~~g~lW-igT~~-Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~~~~  305 (758)
T 3ott_A          230 HNNSIKSLALDGNGDLL-AGTDN-GLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYG-ISLSRY  305 (758)
T ss_dssp             EEEEEEEEEECTTCCEE-EEETT-EEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSS-EEEECC
T ss_pred             CCCeEEEEEEcCCCCEE-EEeCC-ceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCc-cccccc
Confidence            34568888888777654 45554 4788887765432 221111    01 1112233332 33466666666 544433


Q ss_pred             CCCCcceeeee-------eccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCc--ceecc------CCCCcceeEEEE
Q psy15995        389 NNPSTPIRVIK-------GHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEN--DRVQG------AGHGNQINGMKA  453 (683)
Q Consensus       389 ~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~--~~~~~------~~~~~~v~~~~~  453 (683)
                      ...   ...+.       .....|.++....+|.+.+. +.+| +..++..++..  .....      .-....|.++..
T Consensus       306 ~~~---~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~  380 (758)
T 3ott_A          306 NSA---LQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYE  380 (758)
T ss_dssp             CC----CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEE
T ss_pred             CCc---eeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEE
Confidence            221   11111       11346888888777765554 4554 66676654321  11111      012345777777


Q ss_pred             e-CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccC
Q psy15995        454 T-GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHE  532 (683)
Q Consensus       454 ~-~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  532 (683)
                      + ...|..|+ ++-+..++..+.........                           ....   ......+.++...++
T Consensus       381 d~~g~lWigt-~~GL~~~~~~~~~~~~~~~~---------------------------~~~~---~~~~~~v~~i~~d~~  429 (758)
T 3ott_A          381 DKEQQLWIAT-DGSINRYDYATRQFIHYNIV---------------------------DNTG---TYNTNWTYYIFEDTA  429 (758)
T ss_dssp             CTTSCEEEEE-TTEEEEEETTTTEEEEEEEE---------------------------CCC-----CBSSSEEEEEECTT
T ss_pred             CCCCCEEEEe-CCcHhhcCcCCCcEEEeecC---------------------------CCcC---CCCCceEEEEEEcCC
Confidence            6 55666676 56788888776532110000                           0000   001123566666666


Q ss_pred             CCEEEEEcCCCcEEEEEcCCC------ccCc--cee--ec-CCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccc
Q psy15995        533 HGLVAVGGADSKVHIYELNNK------SLSP--KAE--LD-HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHN  601 (683)
Q Consensus       533 ~~~l~~~~~dg~i~i~d~~~~------~~~~--~~~--~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~  601 (683)
                      +++ -+|+..+-+..+|..+.      ....  ...  .+ ....|.++...++|.+.+.++..+-+..+|..+++....
T Consensus       430 g~l-WigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~  508 (758)
T 3ott_A          430 GQL-WISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKL  508 (758)
T ss_dssp             SEE-EEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEE
T ss_pred             CCE-EEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEe
Confidence            654 44665556888886531      1110  000  01 223588999999998877444445588899887765432


Q ss_pred             ccee-eecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEccCCeEEEeeCCCcEEEEee
Q psy15995        602 KEWG-FHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       602 ~~~~-~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~v~vw~~  680 (683)
                      .... .....+.++....+|.+.+. +.+| +..++..+..........-....|.++... .+.|..++..| +..++.
T Consensus       509 ~~~~~~~~~~~~~i~~d~~g~lWig-t~~G-l~~~~~~~~~~~~~~~~gl~~~~i~~i~~~-~g~lWi~t~~G-l~~~~~  584 (758)
T 3ott_A          509 FADELTGEKSPNYLLCDEDGLLWVG-FHGG-VMRINPKDESQQSISFGSFSNNEILSMTCV-KNSIWVSTTNG-LWIIDR  584 (758)
T ss_dssp             CTTTSCGGGCEEEEEECTTSCEEEE-ETTE-EEEECC--CCCCBCCCCC---CCEEEEEEE-TTEEEEEESSC-EEEEET
T ss_pred             cCCCcCCCcccceEEECCCCCEEEE-ecCc-eEEEecCCCceEEecccCCCccceEEEEEC-CCCEEEECCCC-eEEEcC
Confidence            1100 01346788888888877654 4444 888887665432211111134567787654 44555555566 444443

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.79  E-value=1.2e-06  Score=76.45  Aligned_cols=182  Identities=11%  Similarity=0.117  Sum_probs=129.3

Q ss_pred             eeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCcee
Q psy15995        144 IRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVG  223 (683)
Q Consensus       144 i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  223 (683)
                      ...+.|+ ++.+..+.+.+|.|+++|+++++.+... +.   .........++++.|..+.... ..+.+++.++.+.+.
T Consensus        57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~---~~~FgeGit~~g~~Ly~ltw~~-~~v~V~D~~Tl~~~~  130 (268)
T 3nok_A           57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL---GNIFAEGLASDGERLYQLTWTE-GLLFTWSGMPPQRER  130 (268)
T ss_dssp             EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC---TTCCEEEEEECSSCEEEEESSS-CEEEEEETTTTEEEE
T ss_pred             cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC---CCcceeEEEEeCCEEEEEEccC-CEEEEEECCcCcEEE
Confidence            4677776 4677788888899999999999887666 44   3444433444666777776443 347899999999998


Q ss_pred             eeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccc-----cCeEEEEECCCCCEEEEEcCCCcEEE
Q psy15995        224 EISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS-----RFVQAVRYSPSGSHFASAGFDGKVFL  298 (683)
Q Consensus       224 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~dg~i~i  298 (683)
                      ++...... ..++  ++++. |+.+..++.|.++|..+.+.+..+.-..     ..++.+.|. +|+..+..-.+..|.+
T Consensus       131 ti~~~~eG-wGLt--~Dg~~-L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~v  205 (268)
T 3nok_A          131 TTRYSGEG-WGLC--YWNGK-LVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLE  205 (268)
T ss_dssp             EEECSSCC-CCEE--EETTE-EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEE
T ss_pred             EEeCCCce-eEEe--cCCCE-EEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEE
Confidence            88754332 3444  55664 5555668999999999998887765322     244667776 7765555556889999


Q ss_pred             EeCCCCeeEEeccCCc-----------cccCeEEEEEccCCCEEEEEEC
Q psy15995        299 YDGASADLVSELGNPA-----------HKGGVYAVAWKPDGTQLLTASG  336 (683)
Q Consensus       299 w~~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~~~~~  336 (683)
                      .|.++++.+..+....           ...-...|+++|+++.|++.+.
T Consensus       206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence            9999999988876531           1235689999998777766654

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.77  E-value=4.2e-06  Score=72.44  Aligned_cols=185  Identities=12%  Similarity=0.121  Sum_probs=129.8

Q ss_pred             cceeeeEeeccceEEEeecCC--ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCC
Q psy15995        142 TSIRNILVLSIGFYIASGDIS--GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG  219 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~  219 (683)
                      .....+.|++ +.+..+.+.+  +.|+.+|+.+++.+....+.   .........++++.|..+.... ..+.+++.++.
T Consensus        21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~---~~~fgeGi~~~~~~ly~ltw~~-~~v~v~D~~tl   95 (243)
T 3mbr_X           21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP---PPYFGAGIVAWRDRLIQLTWRN-HEGFVYDLATL   95 (243)
T ss_dssp             CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC---TTCCEEEEEEETTEEEEEESSS-SEEEEEETTTT
T ss_pred             cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC---CCcceeEEEEeCCEEEEEEeeC-CEEEEEECCcC
Confidence            3466788886 6666666665  48999999999987766654   3444444445567777776443 34789999999


Q ss_pred             CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccc-----cCeEEEEECCCCCEEEEEcCCC
Q psy15995        220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS-----RFVQAVRYSPSGSHFASAGFDG  294 (683)
Q Consensus       220 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~dg  294 (683)
                      +.+.++...... ..+  .+++.. |+.+..++.|.++|..+.+.+..+.-..     ..++.+.+. +|+..+..-.+.
T Consensus        96 ~~~~ti~~~~~G-wgl--t~dg~~-L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~  170 (243)
T 3mbr_X           96 TPRARFRYPGEG-WAL--TSDDSH-LYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTS  170 (243)
T ss_dssp             EEEEEEECSSCC-CEE--EECSSC-EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTT
T ss_pred             cEEEEEeCCCCc-eEE--eeCCCE-EEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCC
Confidence            999888754432 334  356664 5555668999999999998877765422     245566665 666555555678


Q ss_pred             cEEEEeCCCCeeEEeccCCc-----------cccCeEEEEEccCCCEEEEEEC
Q psy15995        295 KVFLYDGASADLVSELGNPA-----------HKGGVYAVAWKPDGTQLLTASG  336 (683)
Q Consensus       295 ~i~iw~~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~~~~~  336 (683)
                      .|.+.|.++++.+..+...+           ...-...|+++|+++.|++.+.
T Consensus       171 ~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          171 RIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             EEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred             eEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence            99999999999988876431           1235689999998887777765

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.76  E-value=2.4e-06  Score=80.58  Aligned_cols=257  Identities=7%  Similarity=-0.041  Sum_probs=144.5

Q ss_pred             cceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCC--cc-c---ceeeeeecceeeeEeec-cceEEEe
Q psy15995         86 CAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGP--IK-D---IGTLLSLTSIRNILVLS-IGFYIAS  158 (683)
Q Consensus        86 ~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~-~---~~~~~~~~~i~~~~~s~-~~~~l~~  158 (683)
                      ....+++++++|+++.++..++.|..||..+++.. .+........  .. .   .........+..+++.+ +++++++
T Consensus        19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~   97 (322)
T 2fp8_A           19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV   97 (322)
T ss_dssp             SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred             CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence            34567899999987778888899999998765322 1111000000  00 0   00000113467889997 6765555


Q ss_pred             ecCCccEEEEeccccceeeecc-cc-ccCCCeeEEEEcC-CCCeEEEEecC---------------CceEEEEEEccCCC
Q psy15995        159 GDISGKVRIWDTVNKEHILKNE-FH-PIGGPIKDIAWSP-DNQRMVVVGEG---------------RERFGHVFMSETGT  220 (683)
Q Consensus       159 ~~~d~~i~iwd~~~~~~~~~~~-~~-~~~~~i~~~~~s~-~~~~l~~~~~~---------------~~~~~~~~~~~~~~  220 (683)
                      ... +.|..+|..+++...... .. ........+++.+ +|+..++-...               ....+..++.++++
T Consensus        98 d~~-~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~  176 (322)
T 2fp8_A           98 DCY-YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE  176 (322)
T ss_dssp             ETT-TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred             ECC-CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence            343 448888887654211111 11 1113568899999 88655543221               11223444444443


Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc--eeeeccccccCeEEEEECCCCCEEEEEcC------
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK--FKMTKQEHSRFVQAVRYSPSGSHFASAGF------  292 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------  292 (683)
                      .. .+.........++++|+++.++++-..++.|.+|+.....  ....+..... ...+++.++|++.++...      
T Consensus       177 ~~-~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~  254 (322)
T 2fp8_A          177 TT-LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNM  254 (322)
T ss_dssp             EE-EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSST
T ss_pred             EE-EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccc
Confidence            22 2222223456799999998655665677899999876421  1111111223 788999999986665543      


Q ss_pred             ----CCcEEEEeCCCCeeEEeccCCcc--ccCeEEEEEccCCCEEEEEECCCcEEEEECCCC
Q psy15995        293 ----DGKVFLYDGASADLVSELGNPAH--KGGVYAVAWKPDGTQLLTASGDKTCKLWDIETK  348 (683)
Q Consensus       293 ----dg~i~iw~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  348 (683)
                          .+.|..+|. .++.+..+..+..  ...+..+++ .+++++++...++.|..+++...
T Consensus       255 ~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~  314 (322)
T 2fp8_A          255 HGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK  314 (322)
T ss_dssp             TSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred             cCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence                467888886 4777666654211  234666666 35555555556778888887643

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.76  E-value=1.1e-06  Score=76.61  Aligned_cols=182  Identities=10%  Similarity=0.029  Sum_probs=126.1

Q ss_pred             EEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEE-cCCeEEEEeCCCCcccCCcee
Q psy15995        405 ITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCG-IDDTIKQVDLSSNAYSGPEVK  483 (683)
Q Consensus       405 v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~~~~~~~~~~~~~~~~  483 (683)
                      ...+.|+. +.+..+.+.+|.|+.+|+.+++..... .....--..+.+.++.|+... .++.+.++|..+.+       
T Consensus        57 tqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~-------  127 (268)
T 3nok_A           57 TQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQ-------  127 (268)
T ss_dssp             EEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTE-------
T ss_pred             cceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCc-------
Confidence            46788874 566778888899999999999988776 333222344677766665554 58899999988753       


Q ss_pred             cCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeec-
Q psy15995        484 LGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELD-  562 (683)
Q Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-  562 (683)
                                                    .+..++......  .+.++++.|+.+..++.|.++|..+.+........ 
T Consensus       128 ------------------------------~~~ti~~~~eGw--GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~  175 (268)
T 3nok_A          128 ------------------------------RERTTRYSGEGW--GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL  175 (268)
T ss_dssp             ------------------------------EEEEEECSSCCC--CEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred             ------------------------------EEEEEeCCCcee--EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC
Confidence                                          233333333333  34467888888878899999999998877665543 


Q ss_pred             CC---cCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceee-----------ecccEEEEEecCCCCeEEEeec
Q psy15995        563 HL---GPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGF-----------HSAKVNCVAWSPDSALVASGSL  628 (683)
Q Consensus       563 ~~---~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-----------h~~~v~~~~~s~d~~~l~~~~~  628 (683)
                      ..   ..++.+.|. +|+..+..-.++.|.+.|..+++.+....+.+           ...-.+.||++|+++.|.+.+.
T Consensus       176 ~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          176 RGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             TTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             CCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence            22   234667776 77666666578899999999998876555431           1135689999998766666553

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.75  E-value=7.1e-06  Score=76.50  Aligned_cols=228  Identities=11%  Similarity=0.009  Sum_probs=134.5

Q ss_pred             cceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC--c
Q psy15995         86 CAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS--G  163 (683)
Q Consensus        86 ~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--~  163 (683)
                      .....++|+++|+++++-..++.|..||.... .......               ...+..+++.++|+++++....  .
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~---------------~~~p~gia~~~dG~l~vad~~~~~~   95 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV---------------EGKVSGLAFTSNGDLVATGWNADSI   95 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC---------------SSEEEEEEECTTSCEEEEEECTTSC
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC---------------CCCceeEEEcCCCcEEEEeccCCcc
Confidence            45678999999997777767889999997653 2211111               1357788999999866654332  2


Q ss_pred             cEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC-cee---------eeecCCcCeE
Q psy15995        164 KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT-SVG---------EISGQSKPIN  233 (683)
Q Consensus       164 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~v~  233 (683)
                      .|..+|..+++........ .......++..+++ .+++...... .++.++...++ .+.         .....-...+
T Consensus        96 ~v~~~d~~~g~~~~~~~~~-~~~~~~g~~~~~~~-~~~v~d~~~g-~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pn  172 (306)
T 2p4o_A           96 PVVSLVKSDGTVETLLTLP-DAIFLNGITPLSDT-QYLTADSYRG-AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAAN  172 (306)
T ss_dssp             EEEEEECTTSCEEEEEECT-TCSCEEEEEESSSS-EEEEEETTTT-EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEE
T ss_pred             eEEEEcCCCCeEEEEEeCC-CccccCcccccCCC-cEEEEECCCC-eEEEEeCCCCcEeEEEECCccccccccCCCCcCC
Confidence            4666777776643222221 12233455555544 3444432222 23444443321 111         0001112344


Q ss_pred             EEEeecCCCeEEEEeeCCCeEEEEcCCC-Cce--eeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEE--
Q psy15995        234 SCDFKPSRPFRIITGSEDNTIAVFEGPP-FKF--KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVS--  308 (683)
Q Consensus       234 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~--  308 (683)
                      .+  +|+++.++++-...+.|..++... ++.  ...+. .......+++.++|++.++....+.|.+++.. ++...  
T Consensus       173 gi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~  248 (306)
T 2p4o_A          173 GL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIA  248 (306)
T ss_dssp             EE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEE
T ss_pred             Cc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEe
Confidence            55  888887677777789999999764 321  11111 11345668999999876666667899999965 65532  


Q ss_pred             eccCCccccCeEEEEEc---cCCCEEEEEECCC
Q psy15995        309 ELGNPAHKGGVYAVAWK---PDGTQLLTASGDK  338 (683)
Q Consensus       309 ~~~~~~~~~~i~~~~~~---~~~~~l~~~~~dg  338 (683)
                      .+..  ......+++|.   |+++.|++.+..+
T Consensus       249 ~~~~--~~~~p~~~a~~g~~~d~~~LyVt~~~~  279 (306)
T 2p4o_A          249 QAEQ--GVIGSTAVAFGQTEGDCTAIYVVTNGG  279 (306)
T ss_dssp             CGGG--TCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred             eccc--ccCCceEEEEecccCCCCEEEEECCCC
Confidence            3332  33568999998   8888887776543

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.75  E-value=2e-05  Score=73.47  Aligned_cols=231  Identities=13%  Similarity=0.123  Sum_probs=126.4

Q ss_pred             cCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC--cEEEEECCCCce
Q psy15995        273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK--TCKLWDIETKSV  350 (683)
Q Consensus       273 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~  350 (683)
                      .....++|+++++.+++-..++.|..||.... ....+.   .......+++.++++++++.....  .+..++..+++.
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~---~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~  107 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT---VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV  107 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE---CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe---CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence            45778999999997777667899999997653 333333   234688999999999666554332  366677777765


Q ss_pred             eeEEEecCcceeceEEEEecCCEEEEEe-cCCcEEEEecCCCCcceeeee---------eccccEEEEEEeCCCCEEEEE
Q psy15995        351 VSEFIMGNQVEDQQVSCLWQGDYLLTVS-LSGFISYLDVNNPSTPIRVIK---------GHNKPITALALSPDRGTVFTG  420 (683)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~i~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~  420 (683)
                      ................. ..+..+++.. .++.+..+|.......+....         ..-.....+  +|+++.|+.+
T Consensus       108 ~~~~~~~~~~~~~g~~~-~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~  184 (306)
T 2p4o_A          108 ETLLTLPDAIFLNGITP-LSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVS  184 (306)
T ss_dssp             EEEEECTTCSCEEEEEE-SSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEE
T ss_pred             EEEEeCCCccccCcccc-cCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEE
Confidence            43322221111112222 2334444444 477777777653211110000         001122333  4555444333


Q ss_pred             e-CCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEE
Q psy15995        421 S-HDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLV  499 (683)
Q Consensus       421 ~-~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (683)
                      . ..+.|..+++...                                        ......                   
T Consensus       185 d~~~~~I~~~~~~~~----------------------------------------g~~~~~-------------------  205 (306)
T 2p4o_A          185 NTEKMLLLRIPVDST----------------------------------------DKPGEP-------------------  205 (306)
T ss_dssp             ETTTTEEEEEEBCTT----------------------------------------SCBCCC-------------------
T ss_pred             eCCCCEEEEEEeCCC----------------------------------------CCCCcc-------------------
Confidence            2 3345555554321                                        000000                   


Q ss_pred             EEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeec-CCcCeeEEEEC---CC
Q psy15995        500 TVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELD-HLGPVTDCSFS---PS  575 (683)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~s---~~  575 (683)
                                   .....   ...+..++++++|+++++....+.|.+++.. ++........ .....++++|.   ||
T Consensus       206 -------------~~~~~---~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d  268 (306)
T 2p4o_A          206 -------------EIFVE---QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGD  268 (306)
T ss_dssp             -------------EEEEE---SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTT
T ss_pred             -------------EEEec---cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCC
Confidence                         00000   0235778999999887777778899999976 4332111111 23568999998   88


Q ss_pred             CCEEEEEeCCC
Q psy15995        576 NEYLVASDAHR  586 (683)
Q Consensus       576 ~~~l~~~~~d~  586 (683)
                      ++.|++++..+
T Consensus       269 ~~~LyVt~~~~  279 (306)
T 2p4o_A          269 CTAIYVVTNGG  279 (306)
T ss_dssp             TTEEEEEECTT
T ss_pred             CCEEEEECCCC
Confidence            88887766543

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.73  E-value=4.6e-06  Score=88.28  Aligned_cols=249  Identities=10%  Similarity=-0.042  Sum_probs=134.7

Q ss_pred             Cccc-ceEEEEEC-CCCcEEEEec-CCC----CEEEEeCCCc-ccccccccccCCCCcccceeeeeecceeeeEeeccce
Q psy15995         83 EHSC-AVNVAKYS-PSGFYIASGD-ISG----KVRIWDTVNK-EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF  154 (683)
Q Consensus        83 ~h~~-~v~~~~~s-~d~~~las~~-~dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  154 (683)
                      +|.- .+...+|| |||++||.+. .+|    +|+++|+.++ +.+.. ...               .....++|+|||+
T Consensus       170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~---------------~~~~~~~WspDg~  233 (751)
T 2xe4_A          170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVS---------------GTNGEIVWGPDHT  233 (751)
T ss_dssp             TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEE---------------EECSCCEECSSTT
T ss_pred             CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-ccc---------------CceeeEEEecCCC
Confidence            4443 78899999 9999998543 233    4999999988 53211 000               2245789999998


Q ss_pred             EEEeecCC-----ccEEEEeccccceeeecccc-ccCCCeeEEEEcCCCCeEEEEecCC-ceEEEEEEccCCC-ce--ee
Q psy15995        155 YIASGDIS-----GKVRIWDTVNKEHILKNEFH-PIGGPIKDIAWSPDNQRMVVVGEGR-ERFGHVFMSETGT-SV--GE  224 (683)
Q Consensus       155 ~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~~~-~~~~~~~~~~~~~-~~--~~  224 (683)
                      .|+....+     ..|.++++.++.......+. ........+.|+|||++|+...... ...+.+++.+++. ..  ..
T Consensus       234 ~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~  313 (751)
T 2xe4_A          234 SLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEI  313 (751)
T ss_dssp             EEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEE
T ss_pred             EEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEE
Confidence            88876654     36888888775421111111 1223466889999999998877443 3334555555542 12  23


Q ss_pred             e-ecCCcCeEEEEeecCCCeEEEEeeCC----CeEEEEcCCCCceeee-cccccc--CeEEEEECCCCCEEEEEcCCCc-
Q psy15995        225 I-SGQSKPINSCDFKPSRPFRIITGSED----NTIAVFEGPPFKFKMT-KQEHSR--FVQAVRYSPSGSHFASAGFDGK-  295 (683)
Q Consensus       225 ~-~~~~~~v~~~~~~~~~~~~l~~~~~d----~~i~iw~~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~l~~~~~dg~-  295 (683)
                      + .........+.|+..+. +++....+    ..|..++..+...... +..+..  .+..+.+. .+..+++...++. 
T Consensus       314 l~~~~~~~~~s~~~~~g~~-l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~  391 (751)
T 2xe4_A          314 VRPREKGVRYDVQMHGTSH-LVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLT  391 (751)
T ss_dssp             SSCCCTTCCEEEEEETTTE-EEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEE
T ss_pred             eecCCCCceEEEeeeeCCE-EEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEE
Confidence            3 33445556666554444 34444443    3566667654221122 222333  34555554 2334556666775 


Q ss_pred             -EEEEeC-------CCCeeEEeccCCccccCeEEEEE----ccCCCE-EEEEECC---CcEEEEECCCCce
Q psy15995        296 -VFLYDG-------ASADLVSELGNPAHKGGVYAVAW----KPDGTQ-LLTASGD---KTCKLWDIETKSV  350 (683)
Q Consensus       296 -i~iw~~-------~~~~~~~~~~~~~~~~~i~~~~~----~~~~~~-l~~~~~d---g~i~iwd~~~~~~  350 (683)
                       |.++++       .+++....+..+ ....+..+.+    +++++. +++.+..   ..+..+|+.+++.
T Consensus       392 ~l~~~dl~~~~~~~~~g~~~~~l~l~-~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~  461 (751)
T 2xe4_A          392 RIWTMMADSQDGVFKAGTGLREVVME-EPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR  461 (751)
T ss_dssp             EEEEEECCTTTSCCCTTTCCEECCCC-CSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred             EEEEEecccccccccCCccceEECCC-CceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence             555564       333313333321 1122334432    345543 3443332   3577777776653

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.68  E-value=2.9e-05  Score=68.49  Aligned_cols=203  Identities=8%  Similarity=0.088  Sum_probs=135.8

Q ss_pred             ccCcccceEEEEECCCCcEE-EEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEee
Q psy15995         81 YTEHSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASG  159 (683)
Q Consensus        81 ~~~h~~~v~~~~~s~d~~~l-as~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  159 (683)
                      +.+-...+..++|+|+++.| ++...++.|...|.. ++.+.++....             ......+++.+++.++++.
T Consensus        22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g-------------~~D~EGIa~~~~g~~~vs~   87 (255)
T 3qqz_A           22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF-------------VKDLETIEYIGDNQFVISD   87 (255)
T ss_dssp             CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS-------------CSSEEEEEECSTTEEEEEE
T ss_pred             CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC-------------CCChHHeEEeCCCEEEEEE
Confidence            45556689999999976655 556778889999987 76666654432             1456778888999887877


Q ss_pred             cCCccEEEEeccccce---eeeccc----cccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc---CCCceeeee---
Q psy15995        160 DISGKVRIWDTVNKEH---ILKNEF----HPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE---TGTSVGEIS---  226 (683)
Q Consensus       160 ~~d~~i~iwd~~~~~~---~~~~~~----~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~---  226 (683)
                      -.++.+.++++.....   +....+    .........++|+|+++.|.++.+....  .++.++   ....+..+.   
T Consensus        88 E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~--~i~~~~g~~~~~~l~i~~~~~  165 (255)
T 3qqz_A           88 ERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPI--EVYKVNGLLSSNELHISKDKA  165 (255)
T ss_dssp             TTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSE--EEEEEESTTCSSCCEEEECHH
T ss_pred             CCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCc--eEEEEcccccCCceeeecchh
Confidence            6778899988765432   112211    1223457899999999888888876653  344443   111122111   


Q ss_pred             ----cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecccc---------ccCeEEEEECCCCCEEEEEcCC
Q psy15995        227 ----GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH---------SRFVQAVRYSPSGSHFASAGFD  293 (683)
Q Consensus       227 ----~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d  293 (683)
                          .+...+..++++|....+++.......+.++|.. ++.+..+.-.         -.....++|.++|+.. ..++-
T Consensus       166 ~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ly-IvsE~  243 (255)
T 3qqz_A          166 LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIY-IVSEP  243 (255)
T ss_dssp             HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEE-EEETT
T ss_pred             hccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEE-EEcCC
Confidence                1334678999999988878888889999999965 4444433211         1256889999999844 44666


Q ss_pred             CcEEEEeC
Q psy15995        294 GKVFLYDG  301 (683)
Q Consensus       294 g~i~iw~~  301 (683)
                      +.++.+..
T Consensus       244 n~~y~f~~  251 (255)
T 3qqz_A          244 NRFYRFTP  251 (255)
T ss_dssp             TEEEEEEC
T ss_pred             ceEEEEEe
Confidence            66666653

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.68  E-value=2.2e-06  Score=89.41  Aligned_cols=276  Identities=13%  Similarity=0.059  Sum_probs=148.9

Q ss_pred             EEEEcc-CCCEEEEEECCC-----------cEEEEECCCCceeeEEEecCcc--eeceEEEEecCCEEEEEec-CCcEEE
Q psy15995        321 AVAWKP-DGTQLLTASGDK-----------TCKLWDIETKSVVSEFIMGNQV--EDQQVSCLWQGDYLLTVSL-SGFISY  385 (683)
Q Consensus       321 ~~~~~~-~~~~l~~~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~-~g~i~~  385 (683)
                      +.++.+ +++.++.|+.+.           .+.+||+.+++...........  ......+..++..+++|+. +..+.+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            566777 888888887543           5889999887754332222222  2223455578888888884 458999


Q ss_pred             EecCCCC-cceeeeeeccccEEEEEEeCCCCEEEEEe-CC-----CcEEEEcCCCCCcceecc-----CCCCcceeEEEE
Q psy15995        386 LDVNNPS-TPIRVIKGHNKPITALALSPDRGTVFTGS-HD-----GFITRWNAKTGENDRVQG-----AGHGNQINGMKA  453 (683)
Q Consensus       386 ~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----g~i~~w~~~~~~~~~~~~-----~~~~~~v~~~~~  453 (683)
                      ||..... ..+..+.. ...-.+++..++++.++.|+ .+     ..+.+||..+.+......     ............
T Consensus       270 yd~~t~~W~~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~  348 (656)
T 1k3i_A          270 YDSSSDSWIPGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS  348 (656)
T ss_dssp             EEGGGTEEEECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred             ecCcCCceeECCCCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence            9987532 11111111 11123455667899999988 34     568999998776443310     000000000111


Q ss_pred             eCCeEEEEEcCC---------eEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeee----ecC
Q psy15995        454 TGELLYTCGIDD---------TIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSS----LPI  520 (683)
Q Consensus       454 ~~~~l~~~~~d~---------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  520 (683)
                      .+..++.++.++         .+..||..+.......                               .....    .+.
T Consensus       349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~-------------------------------~~~~~~~~~~~~  397 (656)
T 1k3i_A          349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSA-------------------------------GKRQSNRGVAPD  397 (656)
T ss_dssp             TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEE-------------------------------EECEETTEECCC
T ss_pred             CCceEEEECCCCcEEEecCccceeeeecCCcceeecC-------------------------------CccccccccCCC
Confidence            244445555544         4455665543210000                               00000    000


Q ss_pred             CCCCcEEEEc-cCCCEEEEEcCCC-----------cEEEEEcCCCccCcce--eecCCcCeeEEEECCCCCEEEEEeCC-
Q psy15995        521 DYEPSSISLD-HEHGLVAVGGADS-----------KVHIYELNNKSLSPKA--ELDHLGPVTDCSFSPSNEYLVASDAH-  585 (683)
Q Consensus       521 ~~~~~~~~~~-~~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~d-  585 (683)
                      ...-.++.+. .+++++++|+.++           .+.+||..+.......  .+.....-.+++..|+++.++.|+.+ 
T Consensus       398 ~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~  477 (656)
T 1k3i_A          398 AMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRR  477 (656)
T ss_dssp             CBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSB
T ss_pred             CCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCccc
Confidence            1112233333 4778888887542           5778887766543222  22222223455677899999998754 


Q ss_pred             ----------CeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeec
Q psy15995        586 ----------RKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSL  628 (683)
Q Consensus       586 ----------~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~  628 (683)
                                ..+.+||..+.+...............+..+.||+++++.|+.
T Consensus       478 ~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          478 GIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             CCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             CcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence                      4689999987665432221101112234456799999999885

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.67  E-value=4.5e-06  Score=72.26  Aligned_cols=185  Identities=8%  Similarity=-0.025  Sum_probs=125.9

Q ss_pred             ccEEEEEEeCCCCEEEEEeCC--CcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEE-cCCeEEEEeCCCCcccC
Q psy15995        403 KPITALALSPDRGTVFTGSHD--GFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCG-IDDTIKQVDLSSNAYSG  479 (683)
Q Consensus       403 ~~v~~~~~~~~~~~l~~~~~d--g~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~~~~~~~~~~~~  479 (683)
                      .-...+.|++ +.++.+.+.+  +.|+.+|+.+++...........--..+...++.|+... .++.+.++|..+.+   
T Consensus        21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~---   96 (243)
T 3mbr_X           21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLT---   96 (243)
T ss_dssp             CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTE---
T ss_pred             cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCc---
Confidence            3466899986 5555666665  489999999999887765443333345666666666554 58899999988753   


Q ss_pred             CceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcce
Q psy15995        480 PEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKA  559 (683)
Q Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  559 (683)
                                                        .+..++.......  +.++++.|+++..++.|.++|..+.+.....
T Consensus        97 ----------------------------------~~~ti~~~~~Gwg--lt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I  140 (243)
T 3mbr_X           97 ----------------------------------PRARFRYPGEGWA--LTSDDSHLYMSDGTAVIRKLDPDTLQQVGSI  140 (243)
T ss_dssp             ----------------------------------EEEEEECSSCCCE--EEECSSCEEEECSSSEEEEECTTTCCEEEEE
T ss_pred             ----------------------------------EEEEEeCCCCceE--EeeCCCEEEEECCCCeEEEEeCCCCeEEEEE
Confidence                                              3333333333344  4467777777777899999999998877665


Q ss_pred             eec-CC---cCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceee-----------ecccEEEEEecCCCCeEE
Q psy15995        560 ELD-HL---GPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGF-----------HSAKVNCVAWSPDSALVA  624 (683)
Q Consensus       560 ~~~-~~---~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-----------h~~~v~~~~~s~d~~~l~  624 (683)
                      ... +.   ..++.+.+. +|+..+..-.+..|.+.|..+++.+......+           ...-.+.||++|+++.|.
T Consensus       141 ~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lf  219 (243)
T 3mbr_X          141 KVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLF  219 (243)
T ss_dssp             ECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEE
T ss_pred             EEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEE
Confidence            543 21   234566665 67666666578899999999998875544321           113568999999887777


Q ss_pred             Eeec
Q psy15995        625 SGSL  628 (683)
Q Consensus       625 ~~~~  628 (683)
                      +.+.
T Consensus       220 VTGK  223 (243)
T 3mbr_X          220 VTGK  223 (243)
T ss_dssp             EEET
T ss_pred             EECC
Confidence            6664

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.67  E-value=3e-05  Score=72.11  Aligned_cols=238  Identities=11%  Similarity=-0.055  Sum_probs=145.3

Q ss_pred             CeEEEecCCeEEEEeCCCCcc-cccccCcccceEEEEECCCCcEE-EEecCCCCEEEEeCCCcccccccccccCCCCccc
Q psy15995         57 KNFLYTNGNSVIIRNIENPAI-SDIYTEHSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKD  134 (683)
Q Consensus        57 ~~l~~~~~~~i~v~~~~~~~~-~~~~~~h~~~v~~~~~s~d~~~l-as~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  134 (683)
                      .+|.++....|...++++... ...+......+.+++|.+.+..| .+-...+.|..+++............        
T Consensus         5 p~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~--------   76 (318)
T 3sov_A            5 PLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS--------   76 (318)
T ss_dssp             CEEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE--------
T ss_pred             cEEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC--------
Confidence            367778888999999987642 11222234467799999854444 55456678999998765321111000        


Q ss_pred             ceeeeeecceeeeEeec-cceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEE
Q psy15995        135 IGTLLSLTSIRNILVLS-IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHV  213 (683)
Q Consensus       135 ~~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~  213 (683)
                           .......+++.+ .+...++-...+.|.+.++.......  ...........+++.|.+..++.+.......+..
T Consensus        77 -----~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~--l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r  149 (318)
T 3sov_A           77 -----GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV--LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIER  149 (318)
T ss_dssp             -----CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE--EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEE
T ss_pred             -----CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE--EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEE
Confidence                 113456788887 45555565667889999987643221  1122335678999999877777776443333444


Q ss_pred             EEccCCCceeee-ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC
Q psy15995        214 FMSETGTSVGEI-SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF  292 (683)
Q Consensus       214 ~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  292 (683)
                      ...+ |.....+ ...-...+.+++++++..+.++-+..+.|..++...................+++.. +..+.+-..
T Consensus       150 ~~~d-G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~  227 (318)
T 3sov_A          150 AGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWS  227 (318)
T ss_dssp             EETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETT
T ss_pred             EEcC-CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecC
Confidence            4443 3333332 233456789999997776566667788999999764333322332344566777743 334555556


Q ss_pred             CCcEEEEeCCCCeeEEecc
Q psy15995        293 DGKVFLYDGASADLVSELG  311 (683)
Q Consensus       293 dg~i~iw~~~~~~~~~~~~  311 (683)
                      .+.|..++..+++....+.
T Consensus       228 ~~~V~~~~~~~G~~~~~i~  246 (318)
T 3sov_A          228 THSILACNKYTGEGLREIH  246 (318)
T ss_dssp             TTEEEEEETTTCCSCEEEE
T ss_pred             CCeEEEEECCCCCceEEEe
Confidence            7788888887776655543

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.65  E-value=6.8e-05  Score=69.96  Aligned_cols=236  Identities=11%  Similarity=-0.012  Sum_probs=144.1

Q ss_pred             CeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEE-EecCCCCEEEEeCCCc---ccccccccccCCCCc
Q psy15995         57 KNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIA-SGDISGKVRIWDTVNK---EHILKNEFHPIGGPI  132 (683)
Q Consensus        57 ~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~la-s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~  132 (683)
                      .+|.++..+.|...|+.+.+....+. ....+..++|++++..|. +-..++.|..+++.+.   .....+. .      
T Consensus         2 ~~ll~~~~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~-~------   73 (316)
T 1ijq_A            2 AYLFFTNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-S------   73 (316)
T ss_dssp             CEEEEECBSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-C------
T ss_pred             CEEEEECCCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE-e------
Confidence            36778888899999999877655444 345678999998665554 4456678999998762   1111110 0      


Q ss_pred             ccceeeeeecceeeeEeecc-ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEE
Q psy15995        133 KDIGTLLSLTSIRNILVLSI-GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFG  211 (683)
Q Consensus       133 ~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~  211 (683)
                            ........+++.+. +...++-...+.|.+.++........  ..........+++.|++..++.+..+....+
T Consensus        74 ------~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~--~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I  145 (316)
T 1ijq_A           74 ------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPVHGFMYWTDWGTPAKI  145 (316)
T ss_dssp             ------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEE--EECTTCCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred             ------CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEE--EECCCCCcceEEeCCCCCEEEEEccCCCCeE
Confidence                  00134567888864 44555556678899999875432211  1222356789999998888777765432224


Q ss_pred             EEEEccCCCceeee-ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc--ccccCeEEEEECCCCCEEE
Q psy15995        212 HVFMSETGTSVGEI-SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ--EHSRFVQAVRYSPSGSHFA  288 (683)
Q Consensus       212 ~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~  288 (683)
                      .....+ |.....+ ...-...+.+++++++..+.++-...+.|..+|...........  ........+++. .+..++
T Consensus       146 ~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~  223 (316)
T 1ijq_A          146 KKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFW  223 (316)
T ss_dssp             EEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEE
T ss_pred             EEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEE
Confidence            444443 3333333 23345678999999887656666677899999976433222221  122345677774 344555


Q ss_pred             EEcCCCcEEEEeCCCCeeEEec
Q psy15995        289 SAGFDGKVFLYDGASADLVSEL  310 (683)
Q Consensus       289 ~~~~dg~i~iw~~~~~~~~~~~  310 (683)
                      +-...+.|..++..+++....+
T Consensus       224 ~d~~~~~V~~~~~~~g~~~~~i  245 (316)
T 1ijq_A          224 TDIINEAIFSANRLTGSDVNLL  245 (316)
T ss_dssp             EETTTTEEEEEETTTCCCCEEE
T ss_pred             EECCCCeEEEEeCCCCcceEEE
Confidence            5556778888887666655444

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.64  E-value=0.00015  Score=68.58  Aligned_cols=245  Identities=8%  Similarity=-0.103  Sum_probs=147.0

Q ss_pred             eEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccce-EEEeecCCccEE
Q psy15995         88 VNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF-YIASGDISGKVR  166 (683)
Q Consensus        88 v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~d~~i~  166 (683)
                      .+|.+..+++ +|+.+.. ..|+..++..........               ....+..++|.+.+. ...+-...+.|.
T Consensus        36 ~~C~~~~~~~-~ll~~~~-~~I~~i~~~g~~~~~~~~---------------~~~~~~~l~~d~~~~~ly~~D~~~~~I~   98 (349)
T 3v64_C           36 RSCKALGPEP-VLLFANR-IDIRQVLPHRSEYTLLLN---------------NLENAIALDFHHRRELVFWSDVTLDRIL   98 (349)
T ss_dssp             SCEEESSSCC-EEEEECB-SCEEEECTTSCCEEEEEC---------------SCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred             CcccccccCc-eeEeecc-cceEEEeCCCCeeEEeec---------------CCCceEEEEEeccccEEEEEeccCCceE
Confidence            3466666654 4444333 357777776543221111               114467889997544 445555678899


Q ss_pred             EEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEE
Q psy15995        167 IWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRII  246 (683)
Q Consensus       167 iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  246 (683)
                      .+++........  ..........+++.+.+..|+.+...... +.+.+.+.......+.........+++.|.+..+++
T Consensus        99 r~~~~g~~~~~~--~~~~~~~p~glavd~~~g~ly~~d~~~~~-I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~  175 (349)
T 3v64_C           99 RANLNGSNVEEV--VSTGLESPGGLAVDWVHDKLYWTDSGTSR-IEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYW  175 (349)
T ss_dssp             EEETTSCSCEEE--ECSSCSCCCEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEE
T ss_pred             EEecCCCCceEE--EeCCCCCccEEEEecCCCeEEEEcCCCCe-EEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEE
Confidence            999876542211  11122456789999888777777655432 455555533333333344466789999997776566


Q ss_pred             EeeCC-CeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEE-cCCCcEEEEeCCCCeeEEeccCCccccCeEEEEE
Q psy15995        247 TGSED-NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASA-GFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW  324 (683)
Q Consensus       247 ~~~~d-~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~  324 (683)
                      +-... +.|..++.............-.....++++|++..|+.+ ...+.|..+++........+..  .......+++
T Consensus       176 td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~--~~~~P~giav  253 (349)
T 3v64_C          176 TDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ--GLPHPFAITV  253 (349)
T ss_dssp             EECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSSEEEEEE
T ss_pred             eccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeC--CCCCceEEEE
Confidence            65555 788888876543333223334567899999877766655 4467899999765433332322  2345677887


Q ss_pred             ccCCCEEEEEECCCcEEEEECCCCceeeEEE
Q psy15995        325 KPDGTQLLTASGDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       325 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  355 (683)
                      . ++..+++-...+.|..++..+++....+.
T Consensus       254 ~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~  283 (349)
T 3v64_C          254 F-EDSLYWTDWHTKSINSANKFTGKNQEIIR  283 (349)
T ss_dssp             E-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             E-CCEEEEecCCCCeEEEEEccCCCccEEec
Confidence            3 45555555567778888876776655554

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.64  E-value=0.00015  Score=68.04  Aligned_cols=273  Identities=11%  Similarity=0.058  Sum_probs=151.4

Q ss_pred             CCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccc----cCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccc
Q psy15995         45 GQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIY----TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHI  120 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~----~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~  120 (683)
                      ..+..+.+.+++..++++..+.| +...+.++.-...    ......+.+++|++ ++.++. +.++.|.. ....++.-
T Consensus        36 ~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~-g~~g~i~~-S~DgG~tW  111 (327)
T 2xbg_A           36 ATILDMSFIDRHHGWLVGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIV-GEPPIMLH-TTDGGQSW  111 (327)
T ss_dssp             SCEEEEEESSSSCEEEEETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEE-EETTEEEE-ESSTTSSC
T ss_pred             CcEEEEEECCCCcEEEEcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEE-ECCCeEEE-ECCCCCCc
Confidence            46788889888888888877765 4444444322221    12355789999986 444454 45554433 22333322


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccc-cceeeeccccccCCCeeEEEEcCCCCe
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVN-KEHILKNEFHPIGGPIKDIAWSPDNQR  199 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~  199 (683)
                      .......   ..        ...+..+.+.+++..++++. +|.|  |...+ ++. ...........+..+++.|++.+
T Consensus       112 ~~~~~~~---~~--------~~~~~~i~~~~~~~~~~~~~-~g~v--~~S~DgG~t-W~~~~~~~~~~~~~~~~~~~~~~  176 (327)
T 2xbg_A          112 SQIPLDP---KL--------PGSPRLIKALGNGSAEMITN-VGAI--YRTKDSGKN-WQALVQEAIGVMRNLNRSPSGEY  176 (327)
T ss_dssp             EECCCCT---TC--------SSCEEEEEEEETTEEEEEET-TCCE--EEESSTTSS-EEEEECSCCCCEEEEEECTTSCE
T ss_pred             eECcccc---CC--------CCCeEEEEEECCCCEEEEeC-CccE--EEEcCCCCC-CEEeecCCCcceEEEEEcCCCcE
Confidence            2211110   00        02245567777777777664 4543  22222 221 22222233467899999999887


Q ss_pred             EEEEecCCceEEEEEEccC-CCceeee-ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc----cccc
Q psy15995        200 MVVVGEGRERFGHVFMSET-GTSVGEI-SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ----EHSR  273 (683)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~----~~~~  273 (683)
                      +++...+.    .+...+. +..-..+ ......+..+.+.+++.  ++..+.+|.+.+.+...++.-..+.    .+..
T Consensus       177 ~~~g~~G~----~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~--~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~  250 (327)
T 2xbg_A          177 VAVSSRGS----FYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR--LWMIVNGGKIAFSDPDNSENWGELLSPLRRNSV  250 (327)
T ss_dssp             EEEETTSS----EEEEECTTCSSCEEEECCSSSCEEEEEECTTSC--EEEEETTTEEEEEETTEEEEECCCBCTTSSCCS
T ss_pred             EEEECCCc----EEEEeCCCCCceeECCCCCCCccceeEECCCCC--EEEEeCCceEEEecCCCCCeeEeccCCcccCCc
Confidence            76554331    1222232 3322222 23456788999999886  5556667888776422232222221    1234


Q ss_pred             CeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC-ccccCeEEEEEccCCCEEEEEECCCcEEEEEC
Q psy15995        274 FVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP-AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI  345 (683)
Q Consensus       274 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  345 (683)
                      .+.++++.+++..++++. +|.+ .+....++.-..+... .....+.++.|.+++ .+++++.+|.|.-++-
T Consensus       251 ~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~~  320 (327)
T 2xbg_A          251 GFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYVT  320 (327)
T ss_dssp             CEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEECC
T ss_pred             ceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEcC
Confidence            588999998887776665 6766 4454555544433311 123567888887554 4667778887766653

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.64  E-value=0.0001  Score=71.26  Aligned_cols=239  Identities=10%  Similarity=-0.058  Sum_probs=147.3

Q ss_pred             CCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEe-cCCCCEEEEeCCCccc---ccccccccCCCC
Q psy15995         56 GKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASG-DISGKVRIWDTVNKEH---ILKNEFHPIGGP  131 (683)
Q Consensus        56 ~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~-~~dg~i~iwd~~~~~~---~~~~~~~~~~~~  131 (683)
                      ..+|.++..+.|+..+++......... ....+..++|++.+..|..+ ...+.|..+++.....   ...+..      
T Consensus        83 ~~~ll~~~~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~------  155 (400)
T 3p5b_L           83 IAYLFFTNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS------  155 (400)
T ss_dssp             SCEEEEEETTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC------
T ss_pred             cceeEEeccceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe------
Confidence            347777888899999998776554443 45678899999865555544 4567898898865321   000000      


Q ss_pred             cccceeeeeecceeeeEeec-cceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceE
Q psy15995        132 IKDIGTLLSLTSIRNILVLS-IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERF  210 (683)
Q Consensus       132 ~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~  210 (683)
                             ........+++.+ .+...++-...+.|.+.++........  ..........+++.|.+..|+.+..+....
T Consensus       156 -------~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l--~~~~~~~P~~iavdp~~g~ly~td~~~~~~  226 (400)
T 3p5b_L          156 -------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPVHGFMYWTDWGTPAK  226 (400)
T ss_dssp             -------SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEE--EECSSCCEEEEEEETTTTEEEEEECSSSCC
T ss_pred             -------CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEE--EeCCCCCcceEEEecccCeEEEEeCCCCCE
Confidence                   0114567788887 455555666678899999876542221  222234578999999888887776443333


Q ss_pred             EEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc--cccCeEEEEECCCCCEEE
Q psy15995        211 GHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE--HSRFVQAVRYSPSGSHFA  288 (683)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~  288 (683)
                      +.....+...........-...+.+++++++..+.++-...+.|..+|............  .-.....+++. .+..+.
T Consensus       227 I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lyw  305 (400)
T 3p5b_L          227 IKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFW  305 (400)
T ss_dssp             EEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEE
T ss_pred             EEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEE
Confidence            455555433322223334467889999998876566666778999999765433332221  22345567763 334555


Q ss_pred             EEcCCCcEEEEeCCCCeeEEecc
Q psy15995        289 SAGFDGKVFLYDGASADLVSELG  311 (683)
Q Consensus       289 ~~~~dg~i~iw~~~~~~~~~~~~  311 (683)
                      +-...+.|..++..+++.+..+.
T Consensus       306 td~~~~~V~~~~~~~G~~~~~i~  328 (400)
T 3p5b_L          306 TDIINEAIFSANRLTGSDVNLLA  328 (400)
T ss_dssp             EESSSCSEEEEESSSCCCCEEEE
T ss_pred             ecCCCCeEEEEEcCCCCceEEEe
Confidence            55667788888877776666554

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.57  E-value=2.2e-05  Score=76.58  Aligned_cols=240  Identities=10%  Similarity=0.056  Sum_probs=138.6

Q ss_pred             CCeEEEeeCCC--CCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCC---CC-EEEEeCCCc
Q psy15995         45 GQPIVLGGDPK--GKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDIS---GK-VRIWDTVNK  117 (683)
Q Consensus        45 ~~~~~~~~s~~--~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~d---g~-i~iwd~~~~  117 (683)
                      ..+..++++|+  +..|.++ ..+.|+.+|.++++..... +.......++++++|+++++....   .. +...+.. +
T Consensus       139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~-~  216 (433)
T 4hw6_A          139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA-S  216 (433)
T ss_dssp             SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG-G
T ss_pred             CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC-C
Confidence            45778999995  4455555 3389999999888765543 455668999999999955544321   11 2222211 1


Q ss_pred             ccccccccccCCCCcccceeeeeecceeeeEeec-cceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCC
Q psy15995        118 EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS-IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPD  196 (683)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~  196 (683)
                      ....             ............+++.| +|...++-..++.|+.+|..+++.............-..++|+|+
T Consensus       217 ~~~~-------------~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpd  283 (433)
T 4hw6_A          217 GFTE-------------RLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPT  283 (433)
T ss_dssp             TTCC-------------EEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTT
T ss_pred             Ceec-------------cccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCC
Confidence            1000             00111235567889999 676666666778899999987654111111111223357999999


Q ss_pred             CCeEEEEecCCceEEEEEEcc--CCCc--eeeeecC---------------CcCeEEEEe---------ecCCCeEEEEe
Q psy15995        197 NQRMVVVGEGRERFGHVFMSE--TGTS--VGEISGQ---------------SKPINSCDF---------KPSRPFRIITG  248 (683)
Q Consensus       197 ~~~l~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~---------------~~~v~~~~~---------~~~~~~~l~~~  248 (683)
                      +++|+++...... +..++.+  ++..  ...+.+.               -.....+++         .+++. ++++-
T Consensus       284 G~~LYvad~~~~~-I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD  361 (433)
T 4hw6_A          284 GDWAYIIYNGKHC-IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCD  361 (433)
T ss_dssp             SSEEEEEETTTTE-EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEE
T ss_pred             CCEEEEEeCCCCE-EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEE
Confidence            9988887765543 4444444  2221  1111111               123567888         55555 36666


Q ss_pred             eCCCeEEEEcCCCCceeeeccc-----------------cccCeEEEEEC-CCCCEEEEEcCCCcEEEEeCC
Q psy15995        249 SEDNTIAVFEGPPFKFKMTKQE-----------------HSRFVQAVRYS-PSGSHFASAGFDGKVFLYDGA  302 (683)
Q Consensus       249 ~~d~~i~iw~~~~~~~~~~~~~-----------------~~~~v~~~~~~-~~~~~l~~~~~dg~i~iw~~~  302 (683)
                      ..++.|+.++. ++........                 .-.....++++ +++.++++=..++.|+.++++
T Consensus       362 ~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          362 RDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             TTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             CCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence            66788999984 4543322110                 11236778888 556555555556677777653

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.55  E-value=0.00015  Score=69.76  Aligned_cols=245  Identities=8%  Similarity=-0.095  Sum_probs=147.8

Q ss_pred             eEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeecc-ceEEEeecCCccEE
Q psy15995         88 VNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI-GFYIASGDISGKVR  166 (683)
Q Consensus        88 v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~  166 (683)
                      -+|.+..+++ +|+.+.. ..|+..++..........               ....+..++|.+. +..+++-...+.|.
T Consensus        79 ~~C~~~~~~~-~l~~~~~-~~I~~i~~~~~~~~~~~~---------------~~~~~~gl~~d~~~~~ly~~D~~~~~I~  141 (386)
T 3v65_B           79 RSCKALGPEP-VLLFANR-IDIRQVLPHRSEYTLLLN---------------NLENAIALDFHHRRELVFWSDVTLDRIL  141 (386)
T ss_dssp             SCEEECSSCC-EEEEECB-SCEEEECTTSCCCEEEEC---------------SCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred             CeECCccccc-eeEeecC-ccceeeccCCCcEEEEec---------------CCCccEEEEEecCCCeEEEEeCCCCcEE
Confidence            3455655644 4444433 468888876653221111               1145678899975 44555555678899


Q ss_pred             EEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEE
Q psy15995        167 IWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRII  246 (683)
Q Consensus       167 iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  246 (683)
                      .+++........  ..........+++.+.+..|+.+...... +.+.+.+.......+.........+++.|.+..+++
T Consensus       142 r~~~~g~~~~~~--~~~~~~~p~glavd~~~g~lY~~d~~~~~-I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~  218 (386)
T 3v65_B          142 RANLNGSNVEEV--VSTGLESPGGLAVDWVHDKLYWTDSGTSR-IEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYW  218 (386)
T ss_dssp             EEETTSCCEEEE--ECSSCSCCCCEEEETTTTEEEEEETTTTE-EEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred             EEecCCCCcEEE--EeCCCCCccEEEEEeCCCeEEEEcCCCCe-EEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEE
Confidence            999876542211  11122356789999888888777665432 344444333222233344467889999998776566


Q ss_pred             EeeCC-CeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEE-cCCCcEEEEeCCCCeeEEeccCCccccCeEEEEE
Q psy15995        247 TGSED-NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASA-GFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW  324 (683)
Q Consensus       247 ~~~~d-~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~  324 (683)
                      +-... +.|..++.............-.....++++|++..|+.+ ...+.|..+++........+..  .......+++
T Consensus       219 td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~--~~~~P~giav  296 (386)
T 3v65_B          219 TDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ--GLPHPFAITV  296 (386)
T ss_dssp             EECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECS--SCSSEEEEEE
T ss_pred             eccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEEC--CCCCceEEEE
Confidence            65555 788888876543333333334457899999877766555 4467899999765433333322  2345677888


Q ss_pred             ccCCCEEEEEECCCcEEEEECCCCceeeEEE
Q psy15995        325 KPDGTQLLTASGDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       325 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  355 (683)
                       .++..+++-...+.|..++..+++....+.
T Consensus       297 -~~~~ly~td~~~~~V~~~~~~~G~~~~~i~  326 (386)
T 3v65_B          297 -FEDSLYWTDWHTKSINSANKFTGKNQEIIR  326 (386)
T ss_dssp             -ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             -ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence             345555555567788888877777666554

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.54  E-value=3.7e-05  Score=75.08  Aligned_cols=240  Identities=11%  Similarity=0.035  Sum_probs=138.3

Q ss_pred             CCeEEEeeCC-CCCeEEEec-CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecC-CCC---EEEEeCCCcc
Q psy15995         45 GQPIVLGGDP-KGKNFLYTN-GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDI-SGK---VRIWDTVNKE  118 (683)
Q Consensus        45 ~~~~~~~~s~-~~~~l~~~~-~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~-dg~---i~iwd~~~~~  118 (683)
                      ..+..++++| ++..|.++. ++.|..+|+++++..... ........++|+++|++|..+.. ++.   ..+|-...+.
T Consensus       137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~  215 (430)
T 3tc9_A          137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG  215 (430)
T ss_dssp             SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT
T ss_pred             CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc
Confidence            4567899998 455555553 489999999887755433 35566889999999996665543 221   2333323332


Q ss_pred             cccccccccCCCCcccceeeeeecceeeeEeec-cceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCC
Q psy15995        119 HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS-IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDN  197 (683)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~  197 (683)
                      ....             ..+........+++.| +|..+++-...+.|..++..++......... .......++|+|++
T Consensus       216 ~~~~-------------~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~-~~~~P~gia~~pdG  281 (430)
T 3tc9_A          216 FKVI-------------TELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ-DSGWEFHIQFHPSG  281 (430)
T ss_dssp             SCSE-------------EEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS-SSSCCEEEEECTTS
T ss_pred             eeee-------------eeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC-CCCcceeEEEcCCC
Confidence            1100             0111224567889999 6776667667789999999876532222221 12456789999999


Q ss_pred             CeEEEEecCCceEEEEEEccC--CCc--eeeeecC---------------CcCeE-EEEee--------cCCCeEEEEee
Q psy15995        198 QRMVVVGEGRERFGHVFMSET--GTS--VGEISGQ---------------SKPIN-SCDFK--------PSRPFRIITGS  249 (683)
Q Consensus       198 ~~l~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~---------------~~~v~-~~~~~--------~~~~~~l~~~~  249 (683)
                      ++|+++...... +..++.+.  +..  ...+.+.               -.... .++..        +++. ++++-.
T Consensus       282 ~~lyv~d~~~~~-I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~-lyvaD~  359 (430)
T 3tc9_A          282 NYAYIVVVNQHY-ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYD-FYFCDR  359 (430)
T ss_dssp             SEEEEEETTTTE-EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEE-EEEEEG
T ss_pred             CEEEEEECCCCE-EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCe-EEEEEC
Confidence            988887765544 34444432  211  1111111               01122 34443        2243 355555


Q ss_pred             CCCeEEEEcCCCCceeeeccc-----------------cccCeEEEEECCC-CCEEEEEcCCCcEEEEeCC
Q psy15995        250 EDNTIAVFEGPPFKFKMTKQE-----------------HSRFVQAVRYSPS-GSHFASAGFDGKVFLYDGA  302 (683)
Q Consensus       250 ~d~~i~iw~~~~~~~~~~~~~-----------------~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~  302 (683)
                      ..+.|+.++ .+++.......                 .-.....++++|+ +.++++-..+..|+.++++
T Consensus       360 ~n~~I~~i~-~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  429 (430)
T 3tc9_A          360 ENHCIRILT-PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE  429 (430)
T ss_dssp             GGTEEEEEC-TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             CCcEEEEEC-CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence            677888888 44543322211                 0125788999985 5555555556678777653

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.52  E-value=0.00063  Score=63.38  Aligned_cols=238  Identities=8%  Similarity=-0.118  Sum_probs=139.6

Q ss_pred             EEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccc-eEEEeecCCccEEEEecccc---c
Q psy15995         99 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIG-FYIASGDISGKVRIWDTVNK---E  174 (683)
Q Consensus        99 ~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~d~~i~iwd~~~~---~  174 (683)
                      +|+.+.. ..|+..|+.+.+....+.               ....+..++|.+.+ ...++-...+.|..+++...   .
T Consensus         3 ~ll~~~~-~~I~~i~~~~~~~~~~~~---------------~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~   66 (316)
T 1ijq_A            3 YLFFTNR-HEVRKMTLDRSEYTSLIP---------------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS   66 (316)
T ss_dssp             EEEEECB-SSEEEEETTSCCCEEEEC---------------SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-------
T ss_pred             EEEEECC-CeEEEEECCCcceEehhc---------------CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCc
Confidence            3444433 468888887764322211               11456788999865 45555556788999998761   1


Q ss_pred             eeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCC-Ce
Q psy15995        175 HILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSED-NT  253 (683)
Q Consensus       175 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~  253 (683)
                      ... ............+++.+.+..|+.+...... +.+.+.+.......+.........+++.|.+..++++.... +.
T Consensus        67 ~~~-~~~~~~~~~p~glavd~~~~~ly~~d~~~~~-I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~  144 (316)
T 1ijq_A           67 SYD-TVISRDIQAPDGLAVDWIHSNIYWTDSVLGT-VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK  144 (316)
T ss_dssp             -CE-EEECSSCSCCCEEEEETTTTEEEEEETTTTE-EEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE
T ss_pred             ccE-EEEeCCCCCcCEEEEeecCCeEEEEECCCCE-EEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCe
Confidence            111 1111122456889999877777777654433 45556553333223333456788999999777545554433 78


Q ss_pred             EEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEc-CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEE
Q psy15995        254 IAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAG-FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL  332 (683)
Q Consensus       254 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  332 (683)
                      |...+.............-.....+++++++..|+.+. ..+.|..+|.....................+++. ++..++
T Consensus       145 I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~  223 (316)
T 1ijq_A          145 IKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFW  223 (316)
T ss_dssp             EEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEE
T ss_pred             EEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEE
Confidence            88887654332222222345678999999877666554 4678999998643322222111122345777775 355555


Q ss_pred             EEECCCcEEEEECCCCceeeEEE
Q psy15995        333 TASGDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       333 ~~~~dg~i~iwd~~~~~~~~~~~  355 (683)
                      +-...+.|..++..+++....+.
T Consensus       224 ~d~~~~~V~~~~~~~g~~~~~i~  246 (316)
T 1ijq_A          224 TDIINEAIFSANRLTGSDVNLLA  246 (316)
T ss_dssp             EETTTTEEEEEETTTCCCCEEEE
T ss_pred             EECCCCeEEEEeCCCCcceEEEe
Confidence            55567789999987777665553

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.47  E-value=0.00058  Score=64.01  Aligned_cols=272  Identities=11%  Similarity=0.094  Sum_probs=139.8

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccceeeeccc--cccCCCeeEEEEcCCCCeEEEEecCCceEEEEEE-ccC
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEF--HPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFM-SET  218 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~-~~~  218 (683)
                      ..+.++.+.+++..++++ ..|.| +.....++.-.....  ......+.++.|.+ + .+.+++...    .++. .+.
T Consensus        36 ~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~~g----~i~~S~Dg  107 (327)
T 2xbg_A           36 ATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGEPP----IMLHTTDG  107 (327)
T ss_dssp             SCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEETT----EEEEESST
T ss_pred             CcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEECCC----eEEEECCC
Confidence            457778887777777754 45654 333333321111111  11234688999986 3 344444432    3333 333


Q ss_pred             CCceeeee---cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCc
Q psy15995        219 GTSVGEIS---GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGK  295 (683)
Q Consensus       219 ~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  295 (683)
                      |+.-....   .+...+..+.+.+++.  ++.++.++.|..-.-...............+..+++.+++.+++++. +|.
T Consensus       108 G~tW~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~  184 (327)
T 2xbg_A          108 GQSWSQIPLDPKLPGSPRLIKALGNGS--AEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGS  184 (327)
T ss_dssp             TSSCEECCCCTTCSSCEEEEEEEETTE--EEEEETTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSS
T ss_pred             CCCceECccccCCCCCeEEEEEECCCC--EEEEeCCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCc
Confidence            44433322   2345577888877765  33444556553322111122222334556789999999998887765 454


Q ss_pred             EEE-EeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEec---CcceeceEEEEecC
Q psy15995        296 VFL-YDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMG---NQVEDQQVSCLWQG  371 (683)
Q Consensus       296 i~i-w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~  371 (683)
                      +.. .|- .++.-..+.. .....+..+.+.++++.+ .++.+|.+.+.+...++....+...   .......+.+.+++
T Consensus       185 ~~~S~d~-gG~tW~~~~~-~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~  261 (327)
T 2xbg_A          185 FYSTWEP-GQTAWEPHNR-TTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPN  261 (327)
T ss_dssp             EEEEECT-TCSSCEEEEC-CSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSS
T ss_pred             EEEEeCC-CCCceeECCC-CCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCC
Confidence            444 342 1222122211 245678899999988755 5556787777643333332222211   11122334444445


Q ss_pred             CEEEEEecCCcEEEEecCCCCcceeeee---eccccEEEEEEeCCCCEEEEEeCCCcEEEEcC
Q psy15995        372 DYLLTVSLSGFISYLDVNNPSTPIRVIK---GHNKPITALALSPDRGTVFTGSHDGFITRWNA  431 (683)
Q Consensus       372 ~~l~~~~~~g~i~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~  431 (683)
                      ..++ ++.+|.+.. .... ...-..+.   .....+.++.+.+++ .++.++.+|.|.-++-
T Consensus       262 ~~~~-~g~~g~i~~-S~Dg-G~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~~  320 (327)
T 2xbg_A          262 EVWL-AGGAGALLC-SQDG-GQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYVT  320 (327)
T ss_dssp             CEEE-EESTTCEEE-ESST-TSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEECC
T ss_pred             EEEE-EeCCCeEEE-eCCC-CcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEcC
Confidence            5444 445665532 2222 22222222   123567788887554 4666678898877664

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.46  E-value=0.00024  Score=62.59  Aligned_cols=204  Identities=10%  Similarity=0.065  Sum_probs=131.5

Q ss_pred             eeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc-ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCC
Q psy15995        224 EISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ-EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGA  302 (683)
Q Consensus       224 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~  302 (683)
                      .+.+-...+..++++|++..++++...++.|...|.. ++....+. .-....-.+++.+++.++++.-.++.+.++++.
T Consensus        21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~   99 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT   99 (255)
T ss_dssp             ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred             ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence            3455556799999999877656678889999999987 77766653 222457888999988776766667889999876


Q ss_pred             CCee---EEeccC----CccccCeEEEEEccCCCEEEEEECCCcEEEEECCC---CceeeEEEe------cCcceeceEE
Q psy15995        303 SADL---VSELGN----PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIET---KSVVSEFIM------GNQVEDQQVS  366 (683)
Q Consensus       303 ~~~~---~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~~------~~~~~~~~~~  366 (683)
                      ....   +.....    ...+.....++|+|+++.|+++.+.....+|.+..   ...+.....      ........+.
T Consensus       100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~  179 (255)
T 3qqz_A          100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE  179 (255)
T ss_dssp             TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred             CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence            5432   222211    12455679999999998888877766666666541   111222211      0122346777


Q ss_pred             EEecCC-EEEEEecCCcEEEEecCCCCcceeeeeec---------cccEEEEEEeCCCCEEEEEeCCCcEEEEcC
Q psy15995        367 CLWQGD-YLLTVSLSGFISYLDVNNPSTPIRVIKGH---------NKPITALALSPDRGTVFTGSHDGFITRWNA  431 (683)
Q Consensus       367 ~~~~~~-~l~~~~~~g~i~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~  431 (683)
                      +.|... +++....+..+..+|....  .+..+.-.         -..-..+++.++|+..++ ++.+.++.+.-
T Consensus       180 ~dp~tg~lliLS~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~  251 (255)
T 3qqz_A          180 FNQQKNTLLVLSHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP  251 (255)
T ss_dssp             EETTTTEEEEEETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred             EcCCCCeEEEEECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence            777544 5555556677888887643  33332221         125688999999975554 67776766654

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.44  E-value=0.00025  Score=69.17  Aligned_cols=157  Identities=9%  Similarity=0.043  Sum_probs=99.7

Q ss_pred             cceeeeEeec-cceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCc--eEEEEEEccC
Q psy15995        142 TSIRNILVLS-IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE--RFGHVFMSET  218 (683)
Q Consensus       142 ~~i~~~~~s~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~--~~~~~~~~~~  218 (683)
                      .....++++| ++..|.+....+.|+.+|+..++.....   ........++|++++++|+++.....  ....++....
T Consensus       137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~---~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~  213 (430)
T 3tc9_A          137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY---SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE  213 (430)
T ss_dssp             SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE---CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred             CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe---cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence            4567889998 4555666555588999999876533222   13356889999999998887765321  1122333333


Q ss_pred             CCce--eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc-ccccCeEEEEECCCCCEEE-EEcCCC
Q psy15995        219 GTSV--GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ-EHSRFVQAVRYSPSGSHFA-SAGFDG  294 (683)
Q Consensus       219 ~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~-~~~~dg  294 (683)
                      +...  ..+. .......++++|++..++++-..++.|..++...+....... ........++|+|+|++|+ +-...+
T Consensus       214 g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~  292 (430)
T 3tc9_A          214 SGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQH  292 (430)
T ss_dssp             GTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred             Cceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCC
Confidence            3222  2222 234467888999444446666678899999987665422221 1224578899999999554 445677


Q ss_pred             cEEEEeCC
Q psy15995        295 KVFLYDGA  302 (683)
Q Consensus       295 ~i~iw~~~  302 (683)
                      .|..++..
T Consensus       293 ~I~~~~~d  300 (430)
T 3tc9_A          293 YILRSDYD  300 (430)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEeCC
Confidence            89998754

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.36  E-value=0.0023  Score=61.78  Aligned_cols=223  Identities=11%  Similarity=-0.051  Sum_probs=136.6

Q ss_pred             CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCC----CceeeeecCCcCeEEEEe
Q psy15995        162 SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG----TSVGEISGQSKPINSCDF  237 (683)
Q Consensus       162 d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~v~~~~~  237 (683)
                      ...|+..++........   ......+..++|.+.+..|+.+...... +..+..+..    .....+.........+++
T Consensus        91 ~~~I~~i~l~~~~~~~~---~~~~~~~~~l~~d~~~~~lywsD~~~~~-I~~~~~~g~~~~~~~~~~~~~~~~~p~glav  166 (400)
T 3p5b_L           91 RHEVRKMTLDRSEYTSL---IPNLRNVVALDTEVASNRIYWSDLSQRM-ICSTQLDRAHGVSSYDTVISRDIQAPDGLAV  166 (400)
T ss_dssp             TTEEEEECTTSCSCEEE---ECSCSCEEEEEEETTTTEEEEEETTTTE-EEEEEC------CCCEEEECSSCSCEEEEEE
T ss_pred             cceeEEEccCCcceeEe---ccccCcceEEeeeeccCceEEEecCCCe-EEEEEcccCCCCCcceEEEeCCCCCcccEEE
Confidence            36788888876543222   2234678899999988888887765543 344444431    222333334556789999


Q ss_pred             ecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC--CCcEEEEeCCCCeeEEeccCCcc
Q psy15995        238 KPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF--DGKVFLYDGASADLVSELGNPAH  315 (683)
Q Consensus       238 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~  315 (683)
                      .+.+..+.++-...+.|.+.++........+.........+++.|.+..|+....  .+.|...++........+..  .
T Consensus       167 D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~--~  244 (400)
T 3p5b_L          167 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE--N  244 (400)
T ss_dssp             ETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS--S
T ss_pred             EecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC--C
Confidence            9866655677777889999998766544444444456889999997666665542  47899888765443333221  3


Q ss_pred             ccCeEEEEEccCCCEEEEEE-CCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEE-EEEecCCcEEEEecCCC
Q psy15995        316 KGGVYAVAWKPDGTQLLTAS-GDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL-LTVSLSGFISYLDVNNP  391 (683)
Q Consensus       316 ~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~g~i~~~~~~~~  391 (683)
                      -.....|++++++..|+.+. ..+.|..+|+.... ...+............+...++.+ ++-...+.|..++..++
T Consensus       245 l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G  321 (400)
T 3p5b_L          245 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG  321 (400)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-CEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSC
T ss_pred             CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc-cEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCC
Confidence            35678999999877777765 45679999986543 333332221112222233344444 44445667777775553

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.36  E-value=0.00068  Score=62.93  Aligned_cols=228  Identities=12%  Similarity=0.035  Sum_probs=133.7

Q ss_pred             cCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEE-EEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe--C
Q psy15995        379 LSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVF-TGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--G  455 (683)
Q Consensus       379 ~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--~  455 (683)
                      ....|+.+++..................+++|++.+..|+ +-...+.|..+++...................++++  +
T Consensus        11 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~   90 (318)
T 3sov_A           11 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG   90 (318)
T ss_dssp             CEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred             ccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence            3567888888764322222222334567899998665555 444567899999876643221111122334455555  4


Q ss_pred             CeE-EEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCC
Q psy15995        456 ELL-YTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHG  534 (683)
Q Consensus       456 ~~l-~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  534 (683)
                      +.| ++-...+.|.++++......                                    .........+..+++.|.+.
T Consensus        91 g~ly~~d~~~~~I~~~~~dG~~~~------------------------------------~l~~~~~~~P~giavdp~~g  134 (318)
T 3sov_A           91 EKLYWTDSETNRIEVSNLDGSLRK------------------------------------VLFWQELDQPRAIALDPSSG  134 (318)
T ss_dssp             TEEEEEETTTTEEEEEETTSCSCE------------------------------------EEECSSCSSEEEEEEEGGGT
T ss_pred             CeEEEEECCCCEEEEEECCCCcEE------------------------------------EEEeCCCCCccEEEEeCCCC
Confidence            444 44455678888887653210                                    00001223467899998777


Q ss_pred             EEEEEc--CCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEe-CCCeEEEEECCCCccccccceeeecccE
Q psy15995        535 LVAVGG--ADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASD-AHRKVVLYRVPDFELAHNKEWGFHSAKV  611 (683)
Q Consensus       535 ~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~h~~~v  611 (683)
                      .|+...  ..+.|..++++..... ......-.....+++++++..|..++ ..+.|..+++..........  +.....
T Consensus       135 ~ly~td~~~~~~I~r~~~dG~~~~-~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~--~~~~~P  211 (318)
T 3sov_A          135 FMYWTDWGEVPKIERAGMDGSSRF-IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK--GSLPHP  211 (318)
T ss_dssp             EEEEEECSSSCEEEEEETTSCSCE-EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--SCCSCE
T ss_pred             EEEEEecCCCCEEEEEEcCCCCeE-EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEec--CCCCCc
Confidence            766665  3578888888754322 11112334568999999777776665 56789999987533221111  123445


Q ss_pred             EEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEe
Q psy15995        612 NCVAWSPDSALVASGSLDTTIIIWSLASPAKHIII  646 (683)
Q Consensus       612 ~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~  646 (683)
                      ..+++.. +.++.+-...+.|..++..+++....+
T Consensus       212 ~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i  245 (318)
T 3sov_A          212 FALTLFE-DILYWTDWSTHSILACNKYTGEGLREI  245 (318)
T ss_dssp             EEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred             eEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEE
Confidence            6777753 345555556778999998777655444

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.35  E-value=0.00033  Score=68.27  Aligned_cols=250  Identities=11%  Similarity=-0.020  Sum_probs=140.2

Q ss_pred             CeEEEeeCC-CCCeEEEe--cCCeEEEEeCCCCcccccccC---cccceEEEEE-------CCCCcEEEEecCCC-C---
Q psy15995         46 QPIVLGGDP-KGKNFLYT--NGNSVIIRNIENPAISDIYTE---HSCAVNVAKY-------SPSGFYIASGDISG-K---  108 (683)
Q Consensus        46 ~~~~~~~s~-~~~~l~~~--~~~~i~v~~~~~~~~~~~~~~---h~~~v~~~~~-------s~d~~~las~~~dg-~---  108 (683)
                      .+..|+++| ++..|..+  ..+.|++.|++++.+...+..   .......++|       +++|++|..+...+ .   
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~  219 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE  219 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence            467899999 35555544  346899999998877654432   2345899999       99998666655443 2   


Q ss_pred             ---EEEEeCCC-cccccccccccCCCCcccceeeeeecceeeeEeecc-ceEEEeecCCccEEEEecc-------ccce-
Q psy15995        109 ---VRIWDTVN-KEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI-GFYIASGDISGKVRIWDTV-------NKEH-  175 (683)
Q Consensus       109 ---i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iwd~~-------~~~~-  175 (683)
                         |.+.+... +......          ....+........+++.|+ +.++++-..++.|..+|+.       ++.. 
T Consensus       220 ~~~V~~i~r~~~G~~~~~~----------~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~  289 (496)
T 3kya_A          220 SPSVYIIKRNADGTFDDRS----------DIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSW  289 (496)
T ss_dssp             EEEEEEEECCTTSCCSTTS----------CEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCC
T ss_pred             CceEEEEecCCCCceeecc----------cceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceee
Confidence               55655333 1111000          0001112245678889995 5555566677889999997       4442 


Q ss_pred             ----------eeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc--CCCc--eeeeecC------C------
Q psy15995        176 ----------ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE--TGTS--VGEISGQ------S------  229 (683)
Q Consensus       176 ----------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~------~------  229 (683)
                                .......+.......++|+|+|++|+++...... ++.++.+  .+..  ...+-+.      .      
T Consensus       290 tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~-I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~  368 (496)
T 3kya_A          290 DPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHY-FMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTE  368 (496)
T ss_dssp             CCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE-EEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGG
T ss_pred             cccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCE-EEEEecCCCcceecccEEecCCCCCCcccCCcccc
Confidence                      0011111122456899999999987777665544 3333333  2211  0111111      0      


Q ss_pred             ---cCeE-EEEee-------cCCCeEEEEeeCCCeEEEEcCCCCceeeecccc------------------------ccC
Q psy15995        230 ---KPIN-SCDFK-------PSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH------------------------SRF  274 (683)
Q Consensus       230 ---~~v~-~~~~~-------~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~------------------------~~~  274 (683)
                         .... .+...       +++. ++++-..+..|+.++ .++. +.++.+.                        -..
T Consensus       369 a~f~~P~~gv~vd~~~~~~~~~g~-lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~  445 (496)
T 3kya_A          369 ARMNNPCQGVFVKNPDYTGEEEYD-FYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRD  445 (496)
T ss_dssp             CBCSSEEEEEEEECTTCCSSCCEE-EEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSS
T ss_pred             cccCCCeEEEEEccccccccCCCe-EEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCC
Confidence               1233 34443       3444 466666788899998 4553 3333211                        123


Q ss_pred             eEEEEECCC-CCEEEEEcCCCcEEEEeCCCCeeEEe
Q psy15995        275 VQAVRYSPS-GSHFASAGFDGKVFLYDGASADLVSE  309 (683)
Q Consensus       275 v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~  309 (683)
                      ...++++++ +.++++=..+..|+.++++.......
T Consensus       446 P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~~  481 (496)
T 3kya_A          446 VSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVAG  481 (496)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEEECCCC----
T ss_pred             CcEEEEECCCCEEEEEeCCCCEEEEEECCCCccccc
Confidence            667888886 65555555567888888766555443

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.33  E-value=0.00033  Score=68.30  Aligned_cols=202  Identities=12%  Similarity=0.085  Sum_probs=116.9

Q ss_pred             cceeeeEeecc--ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCC--ceEEEEEEcc
Q psy15995        142 TSIRNILVLSI--GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR--ERFGHVFMSE  217 (683)
Q Consensus       142 ~~i~~~~~s~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~--~~~~~~~~~~  217 (683)
                      .....+++.|+  +..|..+...+.|+.+|..+++.....   ........++++++|+ |+++....  .....++...
T Consensus       139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~---~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~  214 (433)
T 4hw6_A          139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT---TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR  214 (433)
T ss_dssp             SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC---CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred             CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee---cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence            45678899984  334444443389999999877643222   1335689999999999 55555421  1112222222


Q ss_pred             CCCce-eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeec-c-ccccCeEEEEECCCCCEEEEE-cCC
Q psy15995        218 TGTSV-GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK-Q-EHSRFVQAVRYSPSGSHFASA-GFD  293 (683)
Q Consensus       218 ~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~l~~~-~~d  293 (683)
                      .+... ............++++|++..++++-..++.|+.++..++.....+ . +....-..++++|+++.|+.+ ...
T Consensus       215 ~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~  294 (433)
T 4hw6_A          215 ASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK  294 (433)
T ss_dssp             GGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred             CCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence            22211 1111123445678899943333556566788999998766652222 1 112234579999999955544 556


Q ss_pred             CcEEEEeCC--CCeeE--Eec----cCCc---------cccCeEEEEE---------ccCCCEEEEEECCCcEEEEECCC
Q psy15995        294 GKVFLYDGA--SADLV--SEL----GNPA---------HKGGVYAVAW---------KPDGTQLLTASGDKTCKLWDIET  347 (683)
Q Consensus       294 g~i~iw~~~--~~~~~--~~~----~~~~---------~~~~i~~~~~---------~~~~~~l~~~~~dg~i~iwd~~~  347 (683)
                      +.|+.++..  ++...  ..+    ...+         .-.....+++         .+++.++++-...+.|+.++. +
T Consensus       295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~  373 (433)
T 4hw6_A          295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-E  373 (433)
T ss_dssp             TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-T
T ss_pred             CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-C
Confidence            789998765  23211  111    0000         1234677899         667766666666778999885 4


Q ss_pred             C
Q psy15995        348 K  348 (683)
Q Consensus       348 ~  348 (683)
                      +
T Consensus       374 G  374 (433)
T 4hw6_A          374 G  374 (433)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.29  E-value=8.8e-06  Score=84.76  Aligned_cols=238  Identities=11%  Similarity=-0.008  Sum_probs=138.8

Q ss_pred             CeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEec-CCCCEEEEeCCCc---ccccccccccCCCCc
Q psy15995         57 KNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD-ISGKVRIWDTVNK---EHILKNEFHPIGGPI  132 (683)
Q Consensus        57 ~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~-~dg~i~iwd~~~~---~~~~~~~~~~~~~~~  132 (683)
                      .+|+++..+.|++.++.+.+....+.. ...+..++|++.+..|..+. ..+.|..+++.+.   .....+..       
T Consensus       378 ~~ll~~~~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~-------  449 (699)
T 1n7d_A          378 AYLFFTNRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-------  449 (699)
T ss_dssp             CCBCCCCTTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC-------
T ss_pred             eeEEecCccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe-------
Confidence            345556667888999888766554443 34567899998766666554 5578999998752   11100000       


Q ss_pred             ccceeeeeecceeeeEeecc-ceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEE
Q psy15995        133 KDIGTLLSLTSIRNILVLSI-GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFG  211 (683)
Q Consensus       133 ~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~  211 (683)
                            ........+++.+. +.+.++-...+.|.+.++........  ..........+++.|++.+|+.+.......+
T Consensus       450 ------~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l--~~~~~~~P~giavDp~~g~ly~td~~~~~~I  521 (699)
T 1n7d_A          450 ------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL--FREQGSKPRAIVVDPVHGFMYWTDWGTPAKI  521 (699)
T ss_dssp             ------SCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEE--CCCSSCCCCCEECCSSSSCCEECCCSSSCCE
T ss_pred             ------CCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEE--EeCCCCCcceEEEccCCCcEEEcccCCCCeE
Confidence                  00133556788754 44455555678899999876542221  1112245678999998777776654322223


Q ss_pred             EEEEccCCCceeee-ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc--ccccCeEEEEECCCCCEEE
Q psy15995        212 HVFMSETGTSVGEI-SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ--EHSRFVQAVRYSPSGSHFA  288 (683)
Q Consensus       212 ~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~  288 (683)
                      .....+ +.....+ ...-...+.|+++|++..++++-...+.|..++.........+.  ........+++..+ .+++
T Consensus       522 ~~~~~d-G~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lyw  599 (699)
T 1n7d_A          522 KKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFW  599 (699)
T ss_dssp             EBCCSS-SCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEE
T ss_pred             EEEeCC-CCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEE
Confidence            333332 2222222 22334567899999877666776778899999986543332222  11122344555443 3444


Q ss_pred             EEcCCCcEEEEeCCCCeeEEeccC
Q psy15995        289 SAGFDGKVFLYDGASADLVSELGN  312 (683)
Q Consensus       289 ~~~~dg~i~iw~~~~~~~~~~~~~  312 (683)
                      +....+.|..++..+++.+..+..
T Consensus       600 td~~~~~V~~~d~~~G~~~~~i~~  623 (699)
T 1n7d_A          600 TDIINEAIFSANRLTGSDVNLLAE  623 (699)
T ss_dssp             ECSTTTCEEEEETTTEEEEECCCT
T ss_pred             EeCCCCeEEEEEccCCCceEEeec
Confidence            555567899999888888777653

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.26  E-value=0.0011  Score=69.48  Aligned_cols=240  Identities=11%  Similarity=-0.025  Sum_probs=139.9

Q ss_pred             CeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEE-EEecCCCCEEEEeCCCcccccccccccCCCCcccc
Q psy15995         57 KNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDI  135 (683)
Q Consensus        57 ~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l-as~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  135 (683)
                      .+|.++....|+..++.......... ....+..|+|.+....| ++-...+.|+.+++............        +
T Consensus       396 p~Ll~an~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~v--------i  466 (791)
T 3m0c_C          396 AYLFFTNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--------I  466 (791)
T ss_dssp             CEEEEECBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE--------E
T ss_pred             cccccccccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEE--------E
Confidence            36777777888888888766544443 45567899999855444 45556678988888753110000000        0


Q ss_pred             eeeeeecceeeeEeeccc-eEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEE
Q psy15995        136 GTLLSLTSIRNILVLSIG-FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF  214 (683)
Q Consensus       136 ~~~~~~~~i~~~~~s~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~  214 (683)
                        .........|++.+.+ ++.++-...+.|.+.++........  ..........|++.|.+.+|+.+..+....+...
T Consensus       467 --~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l--~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~  542 (791)
T 3m0c_C          467 --SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG  542 (791)
T ss_dssp             --CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEE--EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred             --ecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEE--EeCCCCCcceEEEecCCCCEEEecCCCCCeEEEE
Confidence              0011456678888766 4455556678899999876542221  2222356789999999888888765543335555


Q ss_pred             EccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc--cccCeEEEEECCCCCEEEEEcC
Q psy15995        215 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE--HSRFVQAVRYSPSGSHFASAGF  292 (683)
Q Consensus       215 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~  292 (683)
                      .++.......+...-...+.|++.+.+..++++-...+.|...++...........  .-.....|++.. +.++++-..
T Consensus       543 ~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~  621 (791)
T 3m0c_C          543 GLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDII  621 (791)
T ss_dssp             ETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETT
T ss_pred             ecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECC
Confidence            55433333333334467899999988776556656677899998765443333322  122344555532 223333344


Q ss_pred             CCcEEEEeCCCCeeEEec
Q psy15995        293 DGKVFLYDGASADLVSEL  310 (683)
Q Consensus       293 dg~i~iw~~~~~~~~~~~  310 (683)
                      .+.|...+..+++.+..+
T Consensus       622 ~~~I~~~dk~tG~~~~~l  639 (791)
T 3m0c_C          622 NEAIFSANRLTGSDVNLL  639 (791)
T ss_dssp             TTEEEEEETTTCCCCEEE
T ss_pred             CCEEEEEeCCCCcceEEe
Confidence            566777776666544444

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=98.25  E-value=0.0033  Score=58.79  Aligned_cols=270  Identities=11%  Similarity=0.155  Sum_probs=168.1

Q ss_pred             CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCC
Q psy15995        293 DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD  372 (683)
Q Consensus       293 dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (683)
                      +..|.+.|+.++..+.....     .--+.-.+|..+.++.-. ...+.++|+++.+.+..+....+..  -+.+. +.+
T Consensus        47 ~~~vvIiDl~~~~~~~rrpi-----~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~Vv--fWkWi-s~~  117 (494)
T 1bpo_A           47 QAQVVIIDMNDPSNPIRRPI-----SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVT--FWKWI-SLN  117 (494)
T ss_dssp             CCEEEEEETTSTTSCEEEEC-----CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCC--EEEEE-ETT
T ss_pred             CCeEEEEECCCCCcceeccc-----ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCce--EEEec-CCC
Confidence            34788888887655433221     123455788887777665 6789999999999998887765432  22222 333


Q ss_pred             EEEEEecCCcEEEEecCCCCcceeeeeecc----ccEEEEEEeCCCCEEEEEeC-------CCcEEEEcCCCCCcceecc
Q psy15995        373 YLLTVSLSGFISYLDVNNPSTPIRVIKGHN----KPITALALSPDRGTVFTGSH-------DGFITRWNAKTGENDRVQG  441 (683)
Q Consensus       373 ~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~-------dg~i~~w~~~~~~~~~~~~  441 (683)
                      .+ .--.+..|+.|++.....|.+.+..|.    ..|..-..+++.++++..+-       .|.+.+|..+.+.....  
T Consensus       118 ~l-~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~i--  194 (494)
T 1bpo_A          118 TV-ALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI--  194 (494)
T ss_dssp             EE-EEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEE--
T ss_pred             eE-EEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchh--
Confidence            33 334567899999987778888877764    46778888999999884432       36788998876654333  


Q ss_pred             CCCCcceeEEEEeCC-----eEEEEEc---CCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCc
Q psy15995        442 AGHGNQINGMKATGE-----LLYTCGI---DDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGA  513 (683)
Q Consensus       442 ~~~~~~v~~~~~~~~-----~l~~~~~---d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (683)
                      .+|...-..+...++     .+..+..   .+++.+.++.......+  ........+.++++                 
T Consensus       195 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~--~f~kk~vdv~fppe-----------------  255 (494)
T 1bpo_A          195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ--PFPKKAVDVFFPPE-----------------  255 (494)
T ss_dssp             CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCC--CCCCEEEECCCCTT-----------------
T ss_pred             eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCC--CccceeeeeeCCcc-----------------
Confidence            456655555555532     2333333   27888988865411110  00000000000000                 


Q ss_pred             eeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEEC
Q psy15995        514 KVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRV  593 (683)
Q Consensus       514 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~  593 (683)
                           ....-+.++.+++....+..-+.-|.+++||++++..+....+. ...|-..+...+..=++.....|.|.--.+
T Consensus       256 -----~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs-~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v  329 (494)
T 1bpo_A          256 -----AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS-GETIFVTAPHEATAGIIGVNRKGQVLSVCV  329 (494)
T ss_dssp             -----STTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEEETTTTEEEEEETTCEEEEEEE
T ss_pred             -----cccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeeccc-CCceEEecccCCCCcEEEEccCceEEEEEE
Confidence                 01234578899999999999999999999999999887655543 334444444444444555567787777777


Q ss_pred             CCCccc
Q psy15995        594 PDFELA  599 (683)
Q Consensus       594 ~~~~~~  599 (683)
                      +...++
T Consensus       330 ~e~~iv  335 (494)
T 1bpo_A          330 EEENII  335 (494)
T ss_dssp             CTTTHH
T ss_pred             ccccch
Confidence            665554

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=98.18  E-value=0.00081  Score=63.56  Aligned_cols=237  Identities=11%  Similarity=0.022  Sum_probs=125.2

Q ss_pred             CCeEEEeeCCCCCeEEEecCCeEEEEeCCCCc-ccccc---cCcccceEEEEECCC---CcEEEEecC----C----CCE
Q psy15995         45 GQPIVLGGDPKGKNFLYTNGNSVIIRNIENPA-ISDIY---TEHSCAVNVAKYSPS---GFYIASGDI----S----GKV  109 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~-~~~~~---~~h~~~v~~~~~s~d---~~~las~~~----d----g~i  109 (683)
                      ..+..+++.|||+++++...+.|.+++. +++ .+..+   .........|+++|+   +.+|..+..    +    ..|
T Consensus        29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v  107 (354)
T 3a9g_A           29 EVPWSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV  107 (354)
T ss_dssp             SCEEEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred             CCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence            4678899999999888888899999974 443 22111   122356889999997   444443332    3    467


Q ss_pred             EEEeCCCcc-cccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC-------------CccEEEEeccccce
Q psy15995        110 RIWDTVNKE-HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI-------------SGKVRIWDTVNKEH  175 (683)
Q Consensus       110 ~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-------------d~~i~iwd~~~~~~  175 (683)
                      ..|+..... .+...+.-     +..+. .........++|.|||.+.++.+.             .|.|.-++.... .
T Consensus       108 ~r~~~~~~~~~~~~~~~l-----~~~~~-~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~-~  180 (354)
T 3a9g_A          108 IRGRLDGSTFKLKEVKTL-----IDGIP-GAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGR-P  180 (354)
T ss_dssp             EEEEECSSSCCEEEEEEE-----EEEEE-CCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSC-C
T ss_pred             EEEEECCCCcCcCccEEE-----EEcCC-CCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCC-C
Confidence            777765441 00000000     00000 000123467999999986665432             244555554321 0


Q ss_pred             e-------eeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC------------------ceeeeecCCc
Q psy15995        176 I-------LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT------------------SVGEISGQSK  230 (683)
Q Consensus       176 ~-------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~  230 (683)
                      .       ......++ .....++|+|+...|.++.......-.+.....+.                  ++..+.....
T Consensus       181 p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~  259 (354)
T 3a9g_A          181 PADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETW  259 (354)
T ss_dssp             CTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCC
T ss_pred             CCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCc
Confidence            0       00000111 34568999995445555554443222233333322                  1111211233


Q ss_pred             CeEEEEee-------cCCCeEEEEeeCCCeEEEEcCCCC-cee--ee-ccccccCeEEEEECCCCCEEEEEc
Q psy15995        231 PINSCDFK-------PSRPFRIITGSEDNTIAVFEGPPF-KFK--MT-KQEHSRFVQAVRYSPSGSHFASAG  291 (683)
Q Consensus       231 ~v~~~~~~-------~~~~~~l~~~~~d~~i~iw~~~~~-~~~--~~-~~~~~~~v~~~~~~~~~~~l~~~~  291 (683)
                      ....+.|.       .++. ++++....+.|...++... +..  .. +......+..+++.|||.+.++..
T Consensus       260 ap~G~~~y~g~~fp~~~G~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~  330 (354)
T 3a9g_A          260 APSGASFVHGDMFPGLRGW-LLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS  330 (354)
T ss_dssp             CEEEEEECCSSSCGGGTTE-EEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred             CCcceEEECCCCCcccCCc-EEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence            56777774       4554 3566566678888887643 221  12 222245788999999997665553

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.18  E-value=0.0038  Score=65.55  Aligned_cols=212  Identities=7%  Similarity=-0.141  Sum_probs=128.1

Q ss_pred             cceeeeEeecc-ceEEEeecCCccEEEEeccccce--eeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccC
Q psy15995        142 TSIRNILVLSI-GFYIASGDISGKVRIWDTVNKEH--ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSET  218 (683)
Q Consensus       142 ~~i~~~~~s~~-~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~  218 (683)
                      ..+..+++.+. +...++-...+.|+.+++.....  .....+.........|++.+.+..|+.+...... +.+.+.+.
T Consensus       424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~-I~v~~ldG  502 (791)
T 3m0c_C          424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT-VSVADTKG  502 (791)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTE-EEEEETTS
T ss_pred             CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCe-EEEEeCCC
Confidence            45678888884 44555555667888888875311  1111122223567789999999888887765543 55666654


Q ss_pred             CCceeeeecCCcCeEEEEeecCCCeEEEEeeC-CCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEc-CCCcE
Q psy15995        219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSE-DNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAG-FDGKV  296 (683)
Q Consensus       219 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i  296 (683)
                      ......+.........|++.|.+.+++++-.. .+.|.+.++............-.....|++.+.+..|+.+. ..+.|
T Consensus       503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I  582 (791)
T 3m0c_C          503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI  582 (791)
T ss_dssp             SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred             CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence            33333334455668999999987654555433 37888888765544444444446788999998777666664 45689


Q ss_pred             EEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEE
Q psy15995        297 FLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       297 ~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  355 (683)
                      ...++........+.....-....+|++.. +.++++-...+.|...|..+++.+..+.
T Consensus       583 ~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l~  640 (791)
T 3m0c_C          583 SSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLLA  640 (791)
T ss_dssp             EEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred             EEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEee
Confidence            999986544433332211223455676643 3334444456778888877776665553

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.15  E-value=0.0036  Score=61.06  Aligned_cols=211  Identities=10%  Similarity=-0.022  Sum_probs=121.9

Q ss_pred             cceeeeEeec-cce-EEEeecCCccEEEEeccccceeeeccccc-cCCCeeEEEE-------cCCCCeEEEEecCC----
Q psy15995        142 TSIRNILVLS-IGF-YIASGDISGKVRIWDTVNKEHILKNEFHP-IGGPIKDIAW-------SPDNQRMVVVGEGR----  207 (683)
Q Consensus       142 ~~i~~~~~s~-~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~i~~~~~-------s~~~~~l~~~~~~~----  207 (683)
                      .....|+|.| +.. ++++-...+.|++.|++++.......... .......++|       ++++++|+++....    
T Consensus       139 ~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~  218 (496)
T 3kya_A          139 SDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD  218 (496)
T ss_dssp             CSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred             CCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence            3467889998 344 44444445779999998876443222211 1235899999       99999888877654    


Q ss_pred             -ceEEEEEEccC-CCce-----eeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC-------CCce---------
Q psy15995        208 -ERFGHVFMSET-GTSV-----GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP-------PFKF---------  264 (683)
Q Consensus       208 -~~~~~~~~~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~-------~~~~---------  264 (683)
                       ...+.+...+. +...     ..+.. ......++++|++..++++-..++.|..+|..       ++..         
T Consensus       219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~  297 (496)
T 3kya_A          219 ESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP  297 (496)
T ss_dssp             GEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred             cCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence             12233333233 2221     12222 23456788999766667777788899999987       4443         


Q ss_pred             --eee-c-cccccCeEEEEECCCCCEEEEE-cCCCcEEEEeC--CCCee-----EEec-cCCc---------cccCeE-E
Q psy15995        265 --KMT-K-QEHSRFVQAVRYSPSGSHFASA-GFDGKVFLYDG--ASADL-----VSEL-GNPA---------HKGGVY-A  321 (683)
Q Consensus       265 --~~~-~-~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~--~~~~~-----~~~~-~~~~---------~~~~i~-~  321 (683)
                        ... + .+.......++|+|+|+.|+.+ +....|+.++.  ..+..     +.-. ...+         .-.... .
T Consensus       298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g  377 (496)
T 3kya_A          298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG  377 (496)
T ss_dssp             TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred             cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence              111 1 1223456899999999955444 55678888654  33322     1111 1000         111234 4


Q ss_pred             EEEc-------cCCCEEEEEECCCcEEEEECCCCceeeEEE
Q psy15995        322 VAWK-------PDGTQLLTASGDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       322 ~~~~-------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  355 (683)
                      ++..       +++.++++-..++.|+.++. ++ .+.++.
T Consensus       378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G-~v~Tia  416 (496)
T 3kya_A          378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG-IVSTYA  416 (496)
T ss_dssp             EEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TC-BEEEEE
T ss_pred             EEEccccccccCCCeEEEEECCCCEEEEEeC-CC-CEEEEe
Confidence            4554       45666666666788999984 45 344443

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.14  E-value=0.0015  Score=59.94  Aligned_cols=199  Identities=8%  Similarity=0.180  Sum_probs=129.0

Q ss_pred             cceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCC----CCe--EEEEecCC--ceEEEEEEcc--CCCc
Q psy15995        152 IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPD----NQR--MVVVGEGR--ERFGHVFMSE--TGTS  221 (683)
Q Consensus       152 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~----~~~--l~~~~~~~--~~~~~~~~~~--~~~~  221 (683)
                      ...+++.....+-+.+||+ +|+.+....    .+.++.+..-|+    |+.  +++++...  ...+.++..+  ++ .
T Consensus        39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~----~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~  112 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSL-DGKMLHSYN----TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-T  112 (355)
T ss_dssp             GGCEEEEEETTTEEEEEET-TSCEEEEEC----CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-C
T ss_pred             CccEEEEEcCCCCEEEEcC-CCcEEEEcc----CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-c
Confidence            3445666667788999999 666554432    156677666662    222  55666655  5557778664  33 2


Q ss_pred             eeeeec------CC-cCeEEEEe--ecC-CCeEEEEeeCCCeEEEEcCC-------CCceeeeccccccCeEEEEECCCC
Q psy15995        222 VGEISG------QS-KPINSCDF--KPS-RPFRIITGSEDNTIAVFEGP-------PFKFKMTKQEHSRFVQAVRYSPSG  284 (683)
Q Consensus       222 ~~~~~~------~~-~~v~~~~~--~~~-~~~~l~~~~~d~~i~iw~~~-------~~~~~~~~~~~~~~v~~~~~~~~~  284 (683)
                      +..+..      .. ..+..+++  +|. +...+++...+|.+..|++.       +.+.+..+.. ...+..+...+..
T Consensus       113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~  191 (355)
T 3amr_A          113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEY  191 (355)
T ss_dssp             EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTT
T ss_pred             eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCC
Confidence            433321      11 55667777  664 54458888888999999872       3344555543 3568888999888


Q ss_pred             CEEEEEcCCCcEEEEeCC-----CCeeEEeccCCccccCeEEEEEc--cCCC-EEEEEE-CCCcEEEEECC-CCceeeEE
Q psy15995        285 SHFASAGFDGKVFLYDGA-----SADLVSELGNPAHKGGVYAVAWK--PDGT-QLLTAS-GDKTCKLWDIE-TKSVVSEF  354 (683)
Q Consensus       285 ~~l~~~~~dg~i~iw~~~-----~~~~~~~~~~~~~~~~i~~~~~~--~~~~-~l~~~~-~dg~i~iwd~~-~~~~~~~~  354 (683)
                      ..|+.+-++.-|..++.+     +++.+..+....-...+..|++.  ++++ +|++++ .+..+.+||.+ +.+.+..|
T Consensus       192 g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f  271 (355)
T 3amr_A          192 GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF  271 (355)
T ss_dssp             TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred             CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence            899999988777777754     34566555432234478888884  4555 566555 57789999997 66777776


Q ss_pred             Eec
Q psy15995        355 IMG  357 (683)
Q Consensus       355 ~~~  357 (683)
                      ...
T Consensus       272 ~Ig  274 (355)
T 3amr_A          272 RIT  274 (355)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            544

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=98.05  E-value=0.0014  Score=61.94  Aligned_cols=233  Identities=13%  Similarity=0.112  Sum_probs=121.8

Q ss_pred             CCeEEEeeCCCCCeEEEecCCeEEEEeCCCCccc--c---cccCcccceEEEEECCC---CcEEEEecC-C-----CCEE
Q psy15995         45 GQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAIS--D---IYTEHSCAVNVAKYSPS---GFYIASGDI-S-----GKVR  110 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~--~---~~~~h~~~v~~~~~s~d---~~~las~~~-d-----g~i~  110 (683)
                      ..+..+++.|||+++++...+.|.+++  +++..  .   .+.........|+|+||   +.+|..+.. .     +.|.
T Consensus        31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~  108 (352)
T 2ism_A           31 EVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV  108 (352)
T ss_dssp             SCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred             CCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence            367789999999988888789999998  33321  1   11223456789999998   445544332 2     5688


Q ss_pred             EEeCCCcccc---cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC-------------CccEEEEeccccc
Q psy15995        111 IWDTVNKEHI---LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI-------------SGKVRIWDTVNKE  174 (683)
Q Consensus       111 iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-------------d~~i~iwd~~~~~  174 (683)
                      .++...+..-   ..+...+..        .........++|.|||.+.++.+.             .|.|.-++... +
T Consensus       109 r~~~~~~~~~~~~~l~~~~p~~--------~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG-~  179 (352)
T 2ism_A          109 RLRHLGERGVLDRVVLDGIPAR--------PHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG-E  179 (352)
T ss_dssp             EEEECSSCEEEEEEEEEEECCC--------TTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS-S
T ss_pred             EEEeCCCCcCceEEEEEeCCCC--------CCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC-C
Confidence            8887643110   000000000        000123468999999976555332             14555555542 1


Q ss_pred             eee----------e-ccccccCCCeeEEEEcCCCCeEEEEecCCce-----EEEEEEccCCC------------------
Q psy15995        175 HIL----------K-NEFHPIGGPIKDIAWSPDNQRMVVVGEGRER-----FGHVFMSETGT------------------  220 (683)
Q Consensus       175 ~~~----------~-~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~-----~~~~~~~~~~~------------------  220 (683)
                      ...          . ..+...-.....++|+|+...|.++......     .-.+.....+.                  
T Consensus       180 ~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~  259 (352)
T 2ism_A          180 PAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRD  259 (352)
T ss_dssp             BCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCC
T ss_pred             CCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcC
Confidence            000          0 0000001236779999954445555544332     11233333332                  


Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce------eeeccccccCeEEEEECCCCCEEEEEc
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF------KMTKQEHSRFVQAVRYSPSGSHFASAG  291 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~  291 (683)
                      ++..+ .+......++| .++. ++++....+.|...+.+....      ...+......+..+++.|||.+.++..
T Consensus       260 p~~~~-~~~~ap~G~~~-~~G~-l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~  333 (352)
T 2ism_A          260 PLYFW-PQGFPPGNLAF-FRGD-LYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS  333 (352)
T ss_dssp             CSEEC-TTCCCEEEEEE-ETTE-EEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred             CeEec-CCCCCCcceEE-ECCE-EEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence            11112 22234566777 3454 355555667777776553321      112212235688999999998666553

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.01  E-value=0.0017  Score=59.56  Aligned_cols=200  Identities=9%  Similarity=0.114  Sum_probs=119.0

Q ss_pred             CCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe------CC---eEEEEEc---CCeEEEEeCCCCcccCC
Q psy15995        413 DRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT------GE---LLYTCGI---DDTIKQVDLSSNAYSGP  480 (683)
Q Consensus       413 ~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~------~~---~l~~~~~---d~~i~~~~~~~~~~~~~  480 (683)
                      ...+++.....+-+.+||+ +++.+.....   ..+..+...      +.   +.++...   +++|.+|++......  
T Consensus        39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~--  112 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT--  112 (355)
T ss_dssp             GGCEEEEEETTTEEEEEET-TSCEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC--
T ss_pred             CccEEEEEcCCCCEEEEcC-CCcEEEEccC---CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc--
Confidence            4456777777889999999 7777666532   334443333      22   2233333   578999977432110  


Q ss_pred             ceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCC-CCCcEEEE--ccC-CC-EEEEEcCCCcEEEEEcCC---
Q psy15995        481 EVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPID-YEPSSISL--DHE-HG-LVAVGGADSKVHIYELNN---  552 (683)
Q Consensus       481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~-~~-~l~~~~~dg~i~i~d~~~---  552 (683)
                      .......                           ...+... ..+..+|+  +|. ++ ++++...+|.+..|++..   
T Consensus       113 l~~i~~~---------------------------~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~  165 (355)
T 3amr_A          113 LQSMTDP---------------------------DHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKN  165 (355)
T ss_dssp             EEECSCT---------------------------TSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTT
T ss_pred             eeecccc---------------------------ccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCC
Confidence            0000000                           0000011 45666777  664 43 688888899999999832   


Q ss_pred             C----ccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECC-----CCccccccceeeecccEEEEEe--cCCCC
Q psy15995        553 K----SLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVP-----DFELAHNKEWGFHSAKVNCVAW--SPDSA  621 (683)
Q Consensus       553 ~----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~-----~~~~~~~~~~~~h~~~v~~~~~--s~d~~  621 (683)
                      +    +++..  +...+.+..|...+...+|+.+-++.-|..++..     +++++.....+.-...+..|++  .++++
T Consensus       166 g~~~~~lVR~--f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~  243 (355)
T 3amr_A          166 GYISGKKVRA--FKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGK  243 (355)
T ss_dssp             SCEEEEEEEE--EECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGC
T ss_pred             CcccceEEEE--ecCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCC
Confidence            2    22322  3345678899999999999999998777777754     2333322211212236888888  55666


Q ss_pred             -eEEEee-cCCcEEEEeCC-CCceeeEee
Q psy15995        622 -LVASGS-LDTTIIIWSLA-SPAKHIIIK  647 (683)
Q Consensus       622 -~l~~~~-~d~~v~iw~~~-~~~~~~~~~  647 (683)
                       +|++.+ .+.+..+||.+ +.+.+..+.
T Consensus       244 gyLivSsQG~~s~~Vydr~~~~~~vg~f~  272 (355)
T 3amr_A          244 GYLMASSQGNSSYAIYDRQGKNKYVADFR  272 (355)
T ss_dssp             EEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred             EEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence             565555 57799999997 555555553

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.01  E-value=0.0033  Score=57.08  Aligned_cols=160  Identities=8%  Similarity=0.128  Sum_probs=109.3

Q ss_pred             cccCeEEEEECCCCCEEEEEc-CCCcEEEEeCCCCeeEEeccCCc------cccCeEEEEE---ccCCCEEEEEE-----
Q psy15995        271 HSRFVQAVRYSPSGSHFASAG-FDGKVFLYDGASADLVSELGNPA------HKGGVYAVAW---KPDGTQLLTAS-----  335 (683)
Q Consensus       271 ~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~------~~~~i~~~~~---~~~~~~l~~~~-----  335 (683)
                      ......+++|.+....+..++ ..++|..|+...+..... ..+.      ....+..+.|   .|+++++++..     
T Consensus        11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af   89 (334)
T 2p9w_A           11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF   89 (334)
T ss_dssp             TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred             cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence            334455788988666666555 689999999876544333 2221      1124689999   68877776544     


Q ss_pred             --------CCCcEEEEECC---CCceeeEEEecC------------cceeceEEEEecCCEEEEEecC-CcEEEEecCCC
Q psy15995        336 --------GDKTCKLWDIE---TKSVVSEFIMGN------------QVEDQQVSCLWQGDYLLTVSLS-GFISYLDVNNP  391 (683)
Q Consensus       336 --------~dg~i~iwd~~---~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~~~~-g~i~~~~~~~~  391 (683)
                              .+..|..+|+.   +++.+.......            ......+...++|+..++++.. +.|..++....
T Consensus        90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~  169 (334)
T 2p9w_A           90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK  169 (334)
T ss_dssp             CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred             cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence                    25779999999   787766655331            1235677777889999988888 88877777643


Q ss_pred             Ccceeeeee------ccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCC
Q psy15995        392 STPIRVIKG------HNKPITALALSPDRGTVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       392 ~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~  433 (683)
                        ....+..      .....+.++++|+++.|++....|.+..+|+..
T Consensus       170 --~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          170 --TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             --CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred             --EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence              2222211      112366899999999999887799999999884

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.00  E-value=6e-05  Score=78.55  Aligned_cols=217  Identities=9%  Similarity=-0.074  Sum_probs=125.7

Q ss_pred             CCeEEEeeCCCCCeEEEe--cCCeEEEEeCCC----CcccccccCcccceEEEEECCCC-cEEEEecCCCCEEEEeCCCc
Q psy15995         45 GQPIVLGGDPKGKNFLYT--NGNSVIIRNIEN----PAISDIYTEHSCAVNVAKYSPSG-FYIASGDISGKVRIWDTVNK  117 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~--~~~~i~v~~~~~----~~~~~~~~~h~~~v~~~~~s~d~-~~las~~~dg~i~iwd~~~~  117 (683)
                      ..+..++|++++..|.++  ..+.|..+++.+    ......+.........|++.+.+ +++++-...+.|.+.++...
T Consensus       406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~  485 (699)
T 1n7d_A          406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  485 (699)
T ss_dssp             TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred             cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence            356678899988888887  357899999876    23333332233345678998654 44455456678999998755


Q ss_pred             ccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC--CccEEEEeccccceeeeccccccCCCeeEEEEcC
Q psy15995        118 EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI--SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSP  195 (683)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~  195 (683)
                      .....+...              ......+++.|.+.+|+....  .+.|...++........  ....-.....|+|+|
T Consensus       486 ~~~~l~~~~--------------~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l--~~~~l~~PnGlavd~  549 (699)
T 1n7d_A          486 KRKTLFREQ--------------GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL--VTENIQWPNGITLDL  549 (699)
T ss_dssp             CEEEECCCS--------------SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE--SCSSCSSCCCEEECT
T ss_pred             ceEEEEeCC--------------CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE--EeCCCCCccEEEEec
Confidence            322211111              134567888886655544432  36788877754322111  111124567899999


Q ss_pred             CCCeEEEEecCCceEEEEEEccCCCceeeee--cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecccccc
Q psy15995        196 DNQRMVVVGEGRERFGHVFMSETGTSVGEIS--GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSR  273 (683)
Q Consensus       196 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~  273 (683)
                      ++..|+.+...... +..++.+.......+.  ........+++..+  .++++....+.|..++..+++.+..+.....
T Consensus       550 ~~~~LY~aD~~~~~-I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~  626 (699)
T 1n7d_A          550 LSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSDVNLLAENLL  626 (699)
T ss_dssp             TTCCEEEEETTTTE-EEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEEEEECCCTTCS
T ss_pred             cCCEEEEEecCCCe-EEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCCceEEeecCCC
Confidence            98888887765433 4555554322221121  11223345555443  4566777778999999877777666643333


Q ss_pred             CeEEEEE
Q psy15995        274 FVQAVRY  280 (683)
Q Consensus       274 ~v~~~~~  280 (683)
                      ....+++
T Consensus       627 ~P~~i~v  633 (699)
T 1n7d_A          627 SPEDMVL  633 (699)
T ss_dssp             SCCCCCB
T ss_pred             CCcEEEE
Confidence            3344443

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.87  E-value=0.0058  Score=55.49  Aligned_cols=202  Identities=12%  Similarity=0.060  Sum_probs=125.7

Q ss_pred             cCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeee-ccc----c--ccCeEEEEE---CCCCCEEEEEc--------
Q psy15995        230 KPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT-KQE----H--SRFVQAVRY---SPSGSHFASAG--------  291 (683)
Q Consensus       230 ~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~l~~~~--------  291 (683)
                      .-..++.|++....++++.-..++|..|+...+..... +..    .  ...+..+.+   .|+++++++..        
T Consensus        13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~   92 (334)
T 2p9w_A           13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA   92 (334)
T ss_dssp             CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred             cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence            34457889886664445555799999999875543332 221    1  113578999   68877776543        


Q ss_pred             -----CCCcEEEEeCC---CCeeEEeccCCccc-----------cCeEEEEEccCCCEEEEEECC-CcEEEEECCCCcee
Q psy15995        292 -----FDGKVFLYDGA---SADLVSELGNPAHK-----------GGVYAVAWKPDGTQLLTASGD-KTCKLWDIETKSVV  351 (683)
Q Consensus       292 -----~dg~i~iw~~~---~~~~~~~~~~~~~~-----------~~i~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~  351 (683)
                           .+..+..+|+.   +++.+.........           .....++..++|+..++++.. +.|...+.... .+
T Consensus        93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~  171 (334)
T 2p9w_A           93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TV  171 (334)
T ss_dssp             SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CE
T ss_pred             ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EE
Confidence                 25779999998   77776655432111           247899999999999988887 77777776644 33


Q ss_pred             eEEEecC-----cceeceEEEEecCCEEEEEecCCcEEEEecCCCCc-ceeeee-ec---cccEEEE-EEeCCCCEEE-E
Q psy15995        352 SEFIMGN-----QVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPST-PIRVIK-GH---NKPITAL-ALSPDRGTVF-T  419 (683)
Q Consensus       352 ~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~-~~~~~~-~~---~~~v~~~-~~~~~~~~l~-~  419 (683)
                      ..+....     ......+.+.|++..|++....|.+..+|+..+.. ++..-. +.   -.....+ ..-.+|+.++ +
T Consensus       172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~  251 (334)
T 2p9w_A          172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVG  251 (334)
T ss_dssp             EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEE
T ss_pred             eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEE
Confidence            3332222     12245788999999999998899999999885322 111110 21   1223343 3334677744 4


Q ss_pred             EeCCCcEEEEcCC
Q psy15995        420 GSHDGFITRWNAK  432 (683)
Q Consensus       420 ~~~dg~i~~w~~~  432 (683)
                      ....+.+.+.+..
T Consensus       252 ~~~~~~~~l~S~D  264 (334)
T 2p9w_A          252 ARAPYAISFRSWD  264 (334)
T ss_dssp             EETTEEEEEECSS
T ss_pred             cCCCCEEEEECCC
Confidence            4445555555433

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.87  E-value=0.013  Score=54.03  Aligned_cols=235  Identities=13%  Similarity=0.013  Sum_probs=114.2

Q ss_pred             CCCcEEEEec-CC-----CCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC-----c
Q psy15995         95 PSGFYIASGD-IS-----GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS-----G  163 (683)
Q Consensus        95 ~d~~~las~~-~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----~  163 (683)
                      .+++.++.|+ .+     ..+.++|..+.+....-. .+  .           ......+..-++..++.|+.+     .
T Consensus        13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~-~p--~-----------~r~~~~~~~~~~~l~v~GG~~~~~~~~   78 (301)
T 2vpj_A           13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPS-IT--R-----------KRRYVASVSLHDRIYVIGGYDGRSRLS   78 (301)
T ss_dssp             CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCC-CS--S-----------CCBSCEEEEETTEEEEECCBCSSCBCC
T ss_pred             CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCC-CC--h-----------hhccccEEEECCEEEEEcCCCCCccCc
Confidence            3555666666 33     368889987765322111 00  0           001111223456777777754     4


Q ss_pred             cEEEEeccccc---eeeeccccccCCCeeEEEEcCCCCeEEEEecCCc---eEEEEEEccCCCceeeeecCCcCeEEEEe
Q psy15995        164 KVRIWDTVNKE---HILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE---RFGHVFMSETGTSVGEISGQSKPINSCDF  237 (683)
Q Consensus       164 ~i~iwd~~~~~---~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  237 (683)
                      .+.+||+.+++   -.....++.....-..+.+  +++.++.++....   ..+.+++..+.+-...-..........+.
T Consensus        79 ~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~  156 (301)
T 2vpj_A           79 SVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLV  156 (301)
T ss_dssp             CEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEE
T ss_pred             eEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEE
Confidence            68999988766   3222222221111122222  4555554443321   12455555444322111111111111111


Q ss_pred             ecCCCeEEEEeeCC-----CeEEEEcCCCCceeeecc--ccccCeEEEEECCCCCEEEEEcCC-----CcEEEEeCCCCe
Q psy15995        238 KPSRPFRIITGSED-----NTIAVFEGPPFKFKMTKQ--EHSRFVQAVRYSPSGSHFASAGFD-----GKVFLYDGASAD  305 (683)
Q Consensus       238 ~~~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~  305 (683)
                      ..++. +++.|+.+     ..+.+||..+.+....-.  ........+.+  +++.++.|+.+     ..+.+||+.+.+
T Consensus       157 ~~~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~  233 (301)
T 2vpj_A          157 VASGV-IYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDS  233 (301)
T ss_dssp             EETTE-EEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             EECCE-EEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence            22444 46666654     468889987766544321  11111222222  56677777654     468999998887


Q ss_pred             eEEeccCCccccCeEEEEEccCCCEEEEEECC-----CcEEEEECCCCce
Q psy15995        306 LVSELGNPAHKGGVYAVAWKPDGTQLLTASGD-----KTCKLWDIETKSV  350 (683)
Q Consensus       306 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~  350 (683)
                      ....-..+........+.+  +++.++.|+.+     ..+.+||+++.+.
T Consensus       234 W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W  281 (301)
T 2vpj_A          234 WTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSW  281 (301)
T ss_dssp             EEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred             EEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence            6554332222222222222  56777777655     3578888887654

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.86  E-value=0.0039  Score=58.92  Aligned_cols=227  Identities=13%  Similarity=0.097  Sum_probs=116.0

Q ss_pred             ceEEEEECCCCcEEEEecCCCCEEEEeCCCccc--ccccccccCCCCcccceeeeeecceeeeEeecc---ceEEEee-c
Q psy15995         87 AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH--ILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI---GFYIASG-D  160 (683)
Q Consensus        87 ~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~-~  160 (683)
                      ....++|.|||+++++ ..+|.|.+++  +++.  +..+...           .........++++|+   +.+|.++ .
T Consensus        32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~-----------~~g~~~p~gia~~pdf~~~g~lYv~~~   97 (352)
T 2ism_A           32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVY-----------HRGESGLLGLALHPRFPQEPYVYAYRT   97 (352)
T ss_dssp             CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCC-----------CSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred             CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEe-----------ecCCCCceeEEECCCCCCCCEEEEEEe
Confidence            4679999999986655 5668999998  3321  1111100           001145778999998   4444433 3


Q ss_pred             CC-----ccEEEEeccccc-----eeeecccc---ccCCCeeEEEEcCCCCeEEEEecCCc---------eEEEEEEccC
Q psy15995        161 IS-----GKVRIWDTVNKE-----HILKNEFH---PIGGPIKDIAWSPDNQRMVVVGEGRE---------RFGHVFMSET  218 (683)
Q Consensus       161 ~d-----~~i~iwd~~~~~-----~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~~~~---------~~~~~~~~~~  218 (683)
                      ..     +.|..++...+.     .+.. .+.   ........++|.|||.+.++.+....         ....++..+.
T Consensus        98 ~~~~~~~~~v~r~~~~~~~~~~~~~l~~-~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~  176 (352)
T 2ism_A           98 VAEGGLRNQVVRLRHLGERGVLDRVVLD-GIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTP  176 (352)
T ss_dssp             ECTTSSEEEEEEEEECSSCEEEEEEEEE-EECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECT
T ss_pred             cCCCCCccEEEEEEeCCCCcCceEEEEE-eCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcC
Confidence            22     678888876431     1111 121   11123468999999965554433211         1123333332


Q ss_pred             -CC-------------ceeeeecCCcCeEEEEeec-CCCeEEEEee-CCC-------eEEEEcCCCCc------------
Q psy15995        219 -GT-------------SVGEISGQSKPINSCDFKP-SRPFRIITGS-EDN-------TIAVFEGPPFK------------  263 (683)
Q Consensus       219 -~~-------------~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~-~d~-------~i~iw~~~~~~------------  263 (683)
                       +.             ....+...-.....++|+| ++.. +++-. .+.       .|.+..  .+.            
T Consensus       177 dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l-~v~d~g~~~~~~~~~dei~~i~--~G~nyGwp~~~g~~~  253 (352)
T 2ism_A          177 EGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGEL-FSSEHGPSGEQGYGHDEVNLIV--PGGNYGWPRVVGRGN  253 (352)
T ss_dssp             TSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCE-EEEEECC------CCCEEEEEC--TTCBCCTTTCCSCCC
T ss_pred             CCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCE-EEEEcCCCCCCCCCCeEEEEec--cCCcCCCCcccCCCC
Confidence             21             1111111112356788999 5553 33322 222       233332  221            


Q ss_pred             ------eeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee------EEeccCCccccCeEEEEEccCCCEE
Q psy15995        264 ------FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL------VSELGNPAHKGGVYAVAWKPDGTQL  331 (683)
Q Consensus       264 ------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l  331 (683)
                            ....+. +......++| .+|..+++.-..+.|...+++....      ...+..  ....+..+++.|||.++
T Consensus       254 ~~~~~~p~~~~~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~--~~~rp~~v~~~pdG~ly  329 (352)
T 2ism_A          254 DPRYRDPLYFWP-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS--GFGRLREVQVGPDGALY  329 (352)
T ss_dssp             CTTSCCCSEECT-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE--SSCCEEEEEECTTSCEE
T ss_pred             CCCCcCCeEecC-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecc--cCCCeeEEEECCCCcEE
Confidence                  111221 2234567777 5676666666667787777654321      111111  23578999999999766


Q ss_pred             EEEE
Q psy15995        332 LTAS  335 (683)
Q Consensus       332 ~~~~  335 (683)
                      ++..
T Consensus       330 v~~~  333 (352)
T 2ism_A          330 VTTS  333 (352)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            6653

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.85  E-value=0.015  Score=54.95  Aligned_cols=233  Identities=10%  Similarity=0.055  Sum_probs=120.0

Q ss_pred             cceEEEEECCCCcEEEEecCCCCEEEEeCCCcc-cccccccccCCCCcccceeeeeecceeeeEeecc----ceEEEeec
Q psy15995         86 CAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE-HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI----GFYIASGD  160 (683)
Q Consensus        86 ~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~----~~~l~~~~  160 (683)
                      .....++|.|||+++++ ..+|.|.++| .+++ .+..+....           ........++++|+    +...++-.
T Consensus        29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~-----------~g~~g~~gia~~pdf~~~g~lyv~~~   95 (354)
T 3a9g_A           29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVAN-----------VGEAGLLGLALHPEFPKKSWVYLYAS   95 (354)
T ss_dssp             SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCC-----------STTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred             CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceee-----------cCCCceeeEEeCCCCCcCCEEEEEEe
Confidence            34679999999985555 5568999997 3443 111111000           00145678899997    44334332


Q ss_pred             C---C----ccEEEEecccc------ceeeeccccc-cCCCeeEEEEcCCCCeEEEEecCCc---------eEEEEEEcc
Q psy15995        161 I---S----GKVRIWDTVNK------EHILKNEFHP-IGGPIKDIAWSPDNQRMVVVGEGRE---------RFGHVFMSE  217 (683)
Q Consensus       161 ~---d----~~i~iwd~~~~------~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~~~~---------~~~~~~~~~  217 (683)
                      .   +    +.|..|+....      .......+.. .......|+|.|||.+.++.+....         ....|+..+
T Consensus        96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~  175 (354)
T 3a9g_A           96 YFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVD  175 (354)
T ss_dssp             EECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEEC
T ss_pred             ccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEc
Confidence            2   3    56777776653      1111111111 1123467999999976555443211         012333333


Q ss_pred             C-CCc--------eeeeecCCcCeEEEEeec-CCCeEEEEee-CCC--eEEEEcCCCCc------------------eee
Q psy15995        218 T-GTS--------VGEISGQSKPINSCDFKP-SRPFRIITGS-EDN--TIAVFEGPPFK------------------FKM  266 (683)
Q Consensus       218 ~-~~~--------~~~~~~~~~~v~~~~~~~-~~~~~l~~~~-~d~--~i~iw~~~~~~------------------~~~  266 (683)
                      . ++.        ...+...-.....++|+| ++.. +++-. .+.  .|.+..  .+.                  ...
T Consensus       176 ~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l-~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~  252 (354)
T 3a9g_A          176 EEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVM-VATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVI  252 (354)
T ss_dssp             TTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCE-EEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred             CCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCE-EEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEe
Confidence            2 220        111111112356789999 5553 33322 221  233322  111                  112


Q ss_pred             eccccccCeEEEEEC-------CCCCEEEEEcCCCcEEEEeCCCC-eeE--EeccCCccccCeEEEEEccCCCEEEEEE
Q psy15995        267 TKQEHSRFVQAVRYS-------PSGSHFASAGFDGKVFLYDGASA-DLV--SELGNPAHKGGVYAVAWKPDGTQLLTAS  335 (683)
Q Consensus       267 ~~~~~~~~v~~~~~~-------~~~~~l~~~~~dg~i~iw~~~~~-~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~  335 (683)
                      .+.........++|.       .+|.++++.-..+.|...++... +..  ..+. ......+..+++.|||.+.++..
T Consensus       253 ~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~-~~~~~rp~~v~~~pDG~lyv~~~  330 (354)
T 3a9g_A          253 DTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFF-KNVFGRLRDVVIDDDGGILISTS  330 (354)
T ss_dssp             ECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEEC-TTTSCCEEEEEECTTSCEEEEEC
T ss_pred             ecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeec-cCCCCCeeEEEECCCCcEEEEEe
Confidence            221123457788884       56767766666778888887753 222  2221 11245789999999997666553

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=97.65  E-value=0.041  Score=51.65  Aligned_cols=226  Identities=12%  Similarity=0.130  Sum_probs=145.0

Q ss_pred             CCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeecccccc
Q psy15995        105 ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPI  184 (683)
Q Consensus       105 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~  184 (683)
                      .+.+|.|-|+.++..+.+....                 -.+...+|..+.||.=. ..++.|+|+++++.+....+.  
T Consensus        46 ~~~~vvIiDl~~~~~~~rrpi~-----------------AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~--  105 (494)
T 1bpo_A           46 EQAQVVIIDMNDPSNPIRRPIS-----------------ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT--  105 (494)
T ss_dssp             TCCEEEEEETTSTTSCEEEECC-----------------CSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS--
T ss_pred             CCCeEEEEECCCCCcceecccc-----------------cceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC--
Confidence            3347999999887654332222                 12233455555555543 678999999998877666655  


Q ss_pred             CCCeeEEEEcCCCCeEEEEecCCceEEEEEEccC-CCceeeeecC----CcCeEEEEeecCCCeEEEEee------CCCe
Q psy15995        185 GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSET-GTSVGEISGQ----SKPINSCDFKPSRPFRIITGS------EDNT  253 (683)
Q Consensus       185 ~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~------~d~~  253 (683)
                       ..|.--.|-.+. .|+.++...   ++-|..+. ..+.+.+..|    ...|..-..+++.++++++|-      -.|.
T Consensus       106 -e~VvfWkWis~~-~l~lVT~ta---VyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~  180 (494)
T 1bpo_A          106 -DDVTFWKWISLN-TVALVTDNA---VYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA  180 (494)
T ss_dssp             -SCCCEEEEEETT-EEEEECSSE---EEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEE
T ss_pred             -CCceEEEecCCC-eEEEEcCCe---eEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccce
Confidence             567777777554 555555542   45555542 3455556555    346777888999998777764      2578


Q ss_pred             EEEEcCCCCceeeeccccccCeEEEEECCCC---CEEEEEcC---CCcEEEEeCCCC--------eeEEeccCC--cccc
Q psy15995        254 IAVFEGPPFKFKMTKQEHSRFVQAVRYSPSG---SHFASAGF---DGKVFLYDGASA--------DLVSELGNP--AHKG  317 (683)
Q Consensus       254 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~---dg~i~iw~~~~~--------~~~~~~~~~--~~~~  317 (683)
                      +.+|..+. +..+.+.+|......+....+.   +.++.+..   .+++++-++...        +....+..+  ...+
T Consensus       181 mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~D  259 (494)
T 1bpo_A          181 MQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQND  259 (494)
T ss_dssp             EEEEESTT-CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTC
T ss_pred             EEEeeccc-cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccC
Confidence            88998654 4456777887665555443322   23444433   278888887543        111222211  2345


Q ss_pred             CeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEe
Q psy15995        318 GVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIM  356 (683)
Q Consensus       318 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  356 (683)
                      -..++..++.-..++..+.-|.+.+||++++..+..-..
T Consensus       260 FPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrI  298 (494)
T 1bpo_A          260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI  298 (494)
T ss_dssp             CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             ceeEEEecccCCEEEEEecCceEEEEecccceeeeeecc
Confidence            667888898888999999999999999999998766543

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=97.60  E-value=0.05  Score=51.34  Aligned_cols=242  Identities=11%  Similarity=0.047  Sum_probs=125.3

Q ss_pred             CCeEEEeeCCCCC-eEEEecCCeEEEEeCCCCc--cccc----ccCcccceEEEEECCC---CcEEEEe-cC-------C
Q psy15995         45 GQPIVLGGDPKGK-NFLYTNGNSVIIRNIENPA--ISDI----YTEHSCAVNVAKYSPS---GFYIASG-DI-------S  106 (683)
Q Consensus        45 ~~~~~~~~s~~~~-~l~~~~~~~i~v~~~~~~~--~~~~----~~~h~~~v~~~~~s~d---~~~las~-~~-------d  106 (683)
                      ..+..|++.|||+ ++++...+.|.+++.....  .+..    +.........++++||   +.+|..+ +.       .
T Consensus        18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~   97 (353)
T 2g8s_A           18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG   97 (353)
T ss_dssp             SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred             CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence            3678899999999 8877788899999854321  1111    1122446789999996   4444433 22       2


Q ss_pred             CCEEEEeCCCcc-ccccc----ccccCCCCcccceeeeeecceeeeEeeccceEEEeecC-------------CccEEEE
Q psy15995        107 GKVRIWDTVNKE-HILKN----EFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI-------------SGKVRIW  168 (683)
Q Consensus       107 g~i~iwd~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-------------d~~i~iw  168 (683)
                      ..|..+++..+. .+...    ...+..        .........++|.|||.+.++.+.             .|.|.-+
T Consensus        98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~--------~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri  169 (353)
T 2g8s_A           98 TAVGYGRLSDDLSKVTDFRTVFRQMPKL--------STGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRL  169 (353)
T ss_dssp             EEEEEEEECTTSSBEEEEEEEEECSSCC--------BSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEE
T ss_pred             eEEEEEEECCCCCCCCceEEEEEECCCC--------CCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEE
Confidence            246666664331 00000    000000        000122467999999976665433             2456556


Q ss_pred             eccccce----e------eeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCc-----------------
Q psy15995        169 DTVNKEH----I------LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTS-----------------  221 (683)
Q Consensus       169 d~~~~~~----~------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~-----------------  221 (683)
                      +....-.    .      ....+...-.....++|.|+...|.++..+.+..-.+.....+..                 
T Consensus       170 ~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~  249 (353)
T 2g8s_A          170 TDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKI  249 (353)
T ss_dssp             ETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCC
T ss_pred             CCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCcc
Confidence            6543200    0      000011111346789999954455555544322123332222211                 


Q ss_pred             --------------eeeeecCCcCeEEEEeec-------CCCeEEEEeeCCCeEEEEcCCCCceeee---ccccccCeEE
Q psy15995        222 --------------VGEISGQSKPINSCDFKP-------SRPFRIITGSEDNTIAVFEGPPFKFKMT---KQEHSRFVQA  277 (683)
Q Consensus       222 --------------~~~~~~~~~~v~~~~~~~-------~~~~~l~~~~~d~~i~iw~~~~~~~~~~---~~~~~~~v~~  277 (683)
                                    +..+ .+......+.|..       ++. ++++....+.|...++..++....   +......+..
T Consensus       250 ~~~~~~~~~~~~~P~~~~-~~~~ap~G~~~y~g~~fp~~~g~-l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~  327 (353)
T 2g8s_A          250 PEAKGEIVAGTEQPVFYW-KDSPAVSGMAFYNSDKFPQWQQK-LFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRD  327 (353)
T ss_dssp             TTCCBSSCTTSCCCSEEE-SSCCCEEEEEEECCSSSGGGTTE-EEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEE
T ss_pred             CcccCCCCCCccCCeEEe-CCCcCcceeEEECCccCcccCCc-EEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeE
Confidence                          0011 1223566777764       344 366666677888777765543221   2223357899


Q ss_pred             EEECCCCCEEEEEc-CCCcE
Q psy15995        278 VRYSPSGSHFASAG-FDGKV  296 (683)
Q Consensus       278 ~~~~~~~~~l~~~~-~dg~i  296 (683)
                      +++.|||.+.++.. .+|.|
T Consensus       328 v~~~pdG~lyv~td~~~g~I  347 (353)
T 2g8s_A          328 VRTGPDGYLYVLTDESSGEL  347 (353)
T ss_dssp             EEECTTSCEEEEECSTTEEE
T ss_pred             EEECCCCcEEEEEeCCCCEE
Confidence            99999998555433 34433

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.59  E-value=0.014  Score=53.97  Aligned_cols=227  Identities=7%  Similarity=-0.001  Sum_probs=115.0

Q ss_pred             CEEEEEeC--CCcEEEEcCCCCCcceeccCCC-CcceeEEEEeCCeEEEEEcC----CeEEEEeCCCCcccCCceecCCC
Q psy15995        415 GTVFTGSH--DGFITRWNAKTGENDRVQGAGH-GNQINGMKATGELLYTCGID----DTIKQVDLSSNAYSGPEVKLGSQ  487 (683)
Q Consensus       415 ~~l~~~~~--dg~i~~w~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~~~~d----~~i~~~~~~~~~~~~~~~~~~~~  487 (683)
                      ..++.|+.  ...+..||..+.+......... ...-......+..++.|+.+    ..+.++|..+....         
T Consensus        13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~---------   83 (306)
T 3ii7_A           13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWY---------   83 (306)
T ss_dssp             EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEE---------
T ss_pred             eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEE---------
Confidence            34445554  3578899988876544332211 11222223335555666644    55667776654321         


Q ss_pred             CceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCC------CcEEEEEcCCCccCcceee
Q psy15995        488 PRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGAD------SKVHIYELNNKSLSPKAEL  561 (683)
Q Consensus       488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~  561 (683)
                                                ....++....-.+++ .-++++++.|+.+      ..+.+||..+.+.......
T Consensus        84 --------------------------~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~  136 (306)
T 3ii7_A           84 --------------------------SKLGPPTPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSM  136 (306)
T ss_dssp             --------------------------EEECCSSCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCC
T ss_pred             --------------------------ECCCCCccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCC
Confidence                                      111111111112222 2366777777765      4589999988764432222


Q ss_pred             cCCcCeeEEEECCCCCEEEEEeC---------CCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCC--
Q psy15995        562 DHLGPVTDCSFSPSNEYLVASDA---------HRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDT--  630 (683)
Q Consensus       562 ~~~~~v~~~~~s~~~~~l~~~~~---------d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~--  630 (683)
                      .....-.+++. -++++++.|+.         ...+.+||..+.+.............-..+.+  ++++++.|+.++  
T Consensus       137 p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~  213 (306)
T 3ii7_A          137 LTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLG  213 (306)
T ss_dssp             SSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTE
T ss_pred             cCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCC
Confidence            21111111222 26677777653         35588999988765433222101111112222  677888877643  


Q ss_pred             ---cEEEEeCCCCceeeEeecCCCCCCeeEEEEccCCeEEEeeCC-----CcEEEEeec
Q psy15995        631 ---TIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQD-----CNTKIWEIA  681 (683)
Q Consensus       631 ---~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~v~vw~~~  681 (683)
                         .+.+||+.+.+-...-........ .+++..++.+++.+|.+     ..+.+||++
T Consensus       214 ~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~  271 (306)
T 3ii7_A          214 GLDNVEYYDIKLNEWKMVSPMPWKGVT-VKCAAVGSIVYVLAGFQGVGRLGHILEYNTE  271 (306)
T ss_dssp             EBCCEEEEETTTTEEEECCCCSCCBSC-CEEEEETTEEEEEECBCSSSBCCEEEEEETT
T ss_pred             CCceEEEeeCCCCcEEECCCCCCCccc-eeEEEECCEEEEEeCcCCCeeeeeEEEEcCC
Confidence               588999988754433222111112 23333477788888855     346666654

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.59  E-value=0.016  Score=53.55  Aligned_cols=220  Identities=12%  Similarity=0.076  Sum_probs=105.1

Q ss_pred             CeEEEEeCCCCcccc--cccCcccceEEEEECCCCcEEEEecCC-----CCEEEEeCCCcc---cccccccccCCCCccc
Q psy15995         65 NSVIIRNIENPAISD--IYTEHSCAVNVAKYSPSGFYIASGDIS-----GKVRIWDTVNKE---HILKNEFHPIGGPIKD  134 (683)
Q Consensus        65 ~~i~v~~~~~~~~~~--~~~~h~~~v~~~~~s~d~~~las~~~d-----g~i~iwd~~~~~---~~~~~~~~~~~~~~~~  134 (683)
                      ..+.+||+.+.+-..  .+......-.++.  .+++.++.|+.+     ..+.++|..+.+   ....   .+...+   
T Consensus        31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~---~~~p~~---  102 (301)
T 2vpj_A           31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSV---APMNVR---  102 (301)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEE---CCCSSC---
T ss_pred             eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEEC---CCCCCC---
Confidence            478889988765221  1221111112222  367777777754     358999988765   2111   110000   


Q ss_pred             ceeeeeecceeeeEeeccceEEEeecCC-----ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCc-
Q psy15995        135 IGTLLSLTSIRNILVLSIGFYIASGDIS-----GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE-  208 (683)
Q Consensus       135 ~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~-  208 (683)
                             ..-..+ ..-+++.++.|+.+     ..+.+||+.+++-......+..... .+++. -+++.++.++.+.. 
T Consensus       103 -------r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~  172 (301)
T 2vpj_A          103 -------RGLAGA-TTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREG-AGLVV-ASGVIYCLGGYDGLN  172 (301)
T ss_dssp             -------CBSCEE-EEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBS-CEEEE-ETTEEEEECCBCSSC
T ss_pred             -------ccceeE-EEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCccc-ceEEE-ECCEEEEECCCCCCc
Confidence                   111111 22367777777654     3588899887653322222211111 12222 25555555443321 


Q ss_pred             --eEEEEEEccCCCceee--eecCCcCeEEEEeecCCCeEEEEeeCC-----CeEEEEcCCCCceeeeccc--cccCeEE
Q psy15995        209 --RFGHVFMSETGTSVGE--ISGQSKPINSCDFKPSRPFRIITGSED-----NTIAVFEGPPFKFKMTKQE--HSRFVQA  277 (683)
Q Consensus       209 --~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~--~~~~v~~  277 (683)
                        ..+.+++..+.+-...  +.........+.  -++. +++.|+.+     ..+.+||..+.+....-..  ......+
T Consensus       173 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~  249 (301)
T 2vpj_A          173 ILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDH-IYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGA  249 (301)
T ss_dssp             BCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTE-EEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred             ccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCE-EEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeE
Confidence              2245555554432111  111111111222  2344 57777664     4688999887765443221  1111222


Q ss_pred             EEECCCCCEEEEEcCC-----CcEEEEeCCCCeeE
Q psy15995        278 VRYSPSGSHFASAGFD-----GKVFLYDGASADLV  307 (683)
Q Consensus       278 ~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~  307 (683)
                      +.+  +++.++.|+.+     ..+.+||.++.+..
T Consensus       250 ~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~  282 (301)
T 2vpj_A          250 TVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSWE  282 (301)
T ss_dssp             EEE--TTEEEEECCBCSSSBEEEEEEEETTTTEEE
T ss_pred             EEE--CCEEEEEcCcCCCcccccEEEEcCCCCeEE
Confidence            222  56677777655     35788888776554

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.51  E-value=0.034  Score=51.67  Aligned_cols=111  Identities=15%  Similarity=0.194  Sum_probs=62.3

Q ss_pred             cCCCEEEEEcC-C-----CcEEEEEcCCCccCcceeecCC-cCeeEEEECCCCCEEEEEeCCC-----eEEEEECCCCcc
Q psy15995        531 HEHGLVAVGGA-D-----SKVHIYELNNKSLSPKAELDHL-GPVTDCSFSPSNEYLVASDAHR-----KVVLYRVPDFEL  598 (683)
Q Consensus       531 ~~~~~l~~~~~-d-----g~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d~-----~i~i~~~~~~~~  598 (683)
                      .++++++.|+. +     ..+.+||..+.+.......... ..-.++.  -+++.++.|+.++     .+.+||..+.+.
T Consensus       147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W  224 (315)
T 4asc_A          147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKW  224 (315)
T ss_dssp             ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred             ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeE
Confidence            46667777765 2     4689999988754432222211 1112222  2677777777544     588999988765


Q ss_pred             ccccceeeecccEEEEEecCCCCeEEEeecCC--------------cEEEEeCCCCceeeE
Q psy15995        599 AHNKEWGFHSAKVNCVAWSPDSALVASGSLDT--------------TIIIWSLASPAKHII  645 (683)
Q Consensus       599 ~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~--------------~v~iw~~~~~~~~~~  645 (683)
                      ...............+.+  ++++++.|+.++              .+.+||+++.+-...
T Consensus       225 ~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~  283 (315)
T 4asc_A          225 APFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV  283 (315)
T ss_dssp             EEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred             EECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence            433222101111122222  677888887642              477899887765444

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=97.45  E-value=0.017  Score=62.99  Aligned_cols=270  Identities=10%  Similarity=0.162  Sum_probs=157.8

Q ss_pred             CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCC
Q psy15995        293 DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD  372 (683)
Q Consensus       293 dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (683)
                      ..+|.|.|+.++..+.....     .--+.-.+|..+.++.-. ..++.++|+++...+..+....+    ..-+-|-..
T Consensus        47 ~~~vvIidl~~~~~~~rrpi-----~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~----VvfWkWis~  116 (1630)
T 1xi4_A           47 QAQVVIIDMNDPSNPIRRPI-----SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD----VTFWKWISL  116 (1630)
T ss_pred             CceEEEEECCCCCCcccccc-----cchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCC----ceEEEecCC
Confidence            34788888888665432211     122344677777666554 67899999999988877766543    233334333


Q ss_pred             EEEEEecCCcEEEEecCCCCcceeeeeec----cccEEEEEEeCCCCEEEEEe-------CCCcEEEEcCCCCCcceecc
Q psy15995        373 YLLTVSLSGFISYLDVNNPSTPIRVIKGH----NKPITALALSPDRGTVFTGS-------HDGFITRWNAKTGENDRVQG  441 (683)
Q Consensus       373 ~l~~~~~~g~i~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~~w~~~~~~~~~~~~  441 (683)
                      ..+.--.+..|..|++.....|.+.+..|    ...|..-..+++.++++..+       -.|.+.+|..+.+.....  
T Consensus       117 ~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~i--  194 (1630)
T 1xi4_A          117 NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI--  194 (1630)
T ss_pred             CeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhh--
Confidence            34444456789999998767777777666    45677888899999988443       347788888776543322  


Q ss_pred             CCCCcceeEEEEe----CCeEEEEEc----CCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCc
Q psy15995        442 AGHGNQINGMKAT----GELLYTCGI----DDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGA  513 (683)
Q Consensus       442 ~~~~~~v~~~~~~----~~~l~~~~~----d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (683)
                      .+|...-..+...    ...+++-..    .+.+.+.++.......+  ........+.++++                 
T Consensus       195 egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~--~f~kk~~~~~~~~~-----------------  255 (1630)
T 1xi4_A          195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ--PFPKKAVDVFFPPE-----------------  255 (1630)
T ss_pred             hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCC--CCccccccccCCcc-----------------
Confidence            3344433333333    112222221    37888888865411111  00000111111110                 


Q ss_pred             eeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEEC
Q psy15995        514 KVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRV  593 (683)
Q Consensus       514 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~  593 (683)
                           ....-+.++.+++....+..-+.-|.+.+||+.++..+....+. ..+|-..+......=++.....|.|.--.+
T Consensus       256 -----~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris-~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v  329 (1630)
T 1xi4_A          256 -----AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS-GETIFVTAPHEATAGIIGVNRKGQVLSVCV  329 (1630)
T ss_pred             -----cccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcccc-CCceEEeccCCCCCceEEEcCCceEEEEEE
Confidence                 01234567889999999999999999999999999887555442 223333333333223334446666666665


Q ss_pred             CCCccc
Q psy15995        594 PDFELA  599 (683)
Q Consensus       594 ~~~~~~  599 (683)
                      ....++
T Consensus       330 ~~~~iv  335 (1630)
T 1xi4_A          330 EEENII  335 (1630)
T ss_pred             ccchhh
Confidence            554443

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.44  E-value=0.059  Score=49.67  Aligned_cols=190  Identities=12%  Similarity=0.123  Sum_probs=93.2

Q ss_pred             cceEEEeecCC-----ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCc-eE--EEEEEccCCCce-
Q psy15995        152 IGFYIASGDIS-----GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE-RF--GHVFMSETGTSV-  222 (683)
Q Consensus       152 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~-~~--~~~~~~~~~~~~-  222 (683)
                      ++..++.|+.+     ..+.+||..+.+-.....++..... .+++. -+++.+++++.+.. ..  +.+++..+.+-. 
T Consensus        61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~  138 (302)
T 2xn4_A           61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST-LGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH  138 (302)
T ss_dssp             TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred             CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc-eEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence            66777777654     3588899887653332222221111 12222 25555555554322 22  334444333211 


Q ss_pred             -eeeecCCcCeEEEEeecCCCeEEEEeeCC-------CeEEEEcCCCCceeeec--cccccCeEEEEECCCCCEEEEEcC
Q psy15995        223 -GEISGQSKPINSCDFKPSRPFRIITGSED-------NTIAVFEGPPFKFKMTK--QEHSRFVQAVRYSPSGSHFASAGF  292 (683)
Q Consensus       223 -~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------~~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~  292 (683)
                       ..+....... +++. -++. +++.|+.+       ..+.+||..+.+....-  .........+.+  +++.++.|+.
T Consensus       139 ~~~~p~~r~~~-~~~~-~~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~  213 (302)
T 2xn4_A          139 VAPMNTRRSSV-GVGV-VGGL-LYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGH  213 (302)
T ss_dssp             ECCCSSCCBSC-EEEE-ETTE-EEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred             cCCCCCcccCc-eEEE-ECCE-EEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCC
Confidence             1111111111 2222 2444 46666542       45888998776644322  111111222222  5667777765


Q ss_pred             C-----CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC-----cEEEEECCCCce
Q psy15995        293 D-----GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK-----TCKLWDIETKSV  350 (683)
Q Consensus       293 d-----g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~  350 (683)
                      +     ..+.+||..+.+....-..+........+.  -+++.++.|+.++     .+.+||+.+.+-
T Consensus       214 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W  279 (302)
T 2xn4_A          214 DGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDKW  279 (302)
T ss_dssp             SSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred             CCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence            4     468999998876654433221211222222  2567777776553     478888887653

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.44  E-value=0.0061  Score=57.08  Aligned_cols=153  Identities=11%  Similarity=0.049  Sum_probs=96.4

Q ss_pred             eeCCCCCeEEEecCCeEEEEeCCCCcccccccCc----ccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccc-
Q psy15995         51 GGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEH----SCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF-  125 (683)
Q Consensus        51 ~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h----~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~-  125 (683)
                      ....+|..++++.++.|+.-++.....-+.++-.    -..|..+..||+|++||..+.. .|.|-.+..+.....-.. 
T Consensus        27 ~~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~  105 (452)
T 3pbp_A           27 FSSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSI  105 (452)
T ss_dssp             EEETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHH
T ss_pred             EEEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCccccc
Confidence            3578889999999999999888754433444322    2368889999999999998655 799988884421111000 


Q ss_pred             -ccCCCCcccce--eeeeecceeeeEeecc---ceEEEeecCCccEEEEeccccceeee--------ccccccCCCeeEE
Q psy15995        126 -HPIGGPIKDIG--TLLSLTSIRNILVLSI---GFYIASGDISGKVRIWDTVNKEHILK--------NEFHPIGGPIKDI  191 (683)
Q Consensus       126 -~~~~~~~~~~~--~~~~~~~i~~~~~s~~---~~~l~~~~~d~~i~iwd~~~~~~~~~--------~~~~~~~~~i~~~  191 (683)
                       .+.....-.++  .......|..+.|.|-   +..|++-..|+.|++||+........        +........|.++
T Consensus       106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~  185 (452)
T 3pbp_A          106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDL  185 (452)
T ss_dssp             HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEE
T ss_pred             ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEE
Confidence             00000000000  0112367999999995   45899999999999999986321111        1111222567888


Q ss_pred             EEcCCCCeEEEEe
Q psy15995        192 AWSPDNQRMVVVG  204 (683)
Q Consensus       192 ~~s~~~~~l~~~~  204 (683)
                      +|.+++-.|.+..
T Consensus       186 ~Fg~~~lTLYvl~  198 (452)
T 3pbp_A          186 EFSKDGLTLYCLN  198 (452)
T ss_dssp             EECTTSSCEEEEE
T ss_pred             EEcCCCcEEEEEe
Confidence            9988877777655

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.44  E-value=0.026  Score=52.89  Aligned_cols=146  Identities=13%  Similarity=0.152  Sum_probs=92.2

Q ss_pred             EEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecC---CcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccc---
Q psy15995        528 SLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDH---LGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHN---  601 (683)
Q Consensus       528 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~---  601 (683)
                      ....++..++++- ++.||.-++......+.....+   ...|..+..+|+|++||..+ +..|.|-.++.+.....   
T Consensus        27 ~~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~  104 (452)
T 3pbp_A           27 FSSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVS  104 (452)
T ss_dssp             EEETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHH
T ss_pred             EEEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccc
Confidence            3445555555543 3678888877543222233332   33688999999999999986 45799999984321111   


Q ss_pred             -------ccee------eecccEEEEEecCC---CCeEEEeecCCcEEEEeCCCCceee-Eee-------cCCCCCCeeE
Q psy15995        602 -------KEWG------FHSAKVNCVAWSPD---SALVASGSLDTTIIIWSLASPAKHI-IIK-------NAHPQSQITR  657 (683)
Q Consensus       602 -------~~~~------~h~~~v~~~~~s~d---~~~l~~~~~d~~v~iw~~~~~~~~~-~~~-------~~~~~~~v~~  657 (683)
                             ..+.      ....+|..+.|+|-   +..|++-..|+.|++||+....... .+.       .......|.+
T Consensus       105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S  184 (452)
T 3pbp_A          105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITD  184 (452)
T ss_dssp             HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEE
T ss_pred             cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEE
Confidence                   0111      02467999999994   5689999999999999998633211 221       1112368899


Q ss_pred             EEEccCC-eEE--EeeCCCcE
Q psy15995        658 LQWLDND-LLV--SVGQDCNT  675 (683)
Q Consensus       658 l~~~~~~-~l~--s~~~d~~v  675 (683)
                      ++|..+. .|.  +..+.|.|
T Consensus       185 ~~Fg~~~lTLYvl~~t~~GDI  205 (452)
T 3pbp_A          185 LEFSKDGLTLYCLNTTEGGDI  205 (452)
T ss_dssp             EEECTTSSCEEEEECTTSCEE
T ss_pred             EEEcCCCcEEEEEecCCCCCE
Confidence            9999443 333  45577755

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.44  E-value=0.021  Score=53.18  Aligned_cols=205  Identities=16%  Similarity=0.188  Sum_probs=114.3

Q ss_pred             eEEEEECCCCcEEEEe------------cCCCCEEEEeCCCcc-cccccccccCCCCcccceeeeeecceeeeEeec--c
Q psy15995         88 VNVAKYSPSGFYIASG------------DISGKVRIWDTVNKE-HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS--I  152 (683)
Q Consensus        88 v~~~~~s~d~~~las~------------~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~  152 (683)
                      ...+++.|+|..++++            ..+|.|.++|.++.. ...++........       ........+.+.+  +
T Consensus        52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~-------~~~f~PhGi~~~~d~d  124 (355)
T 3sre_A           52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLD-------ISSFNPHGISTFIDDD  124 (355)
T ss_dssp             CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCC-------GGGCCEEEEEEEECTT
T ss_pred             cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCC-------cCceeeeeeEEEECCC
Confidence            3466678888666555            268899999987431 1222222110000       0012345556555  3


Q ss_pred             ce-EEEee-cC--CccEEEEeccccc--eeeeccccc-cCCCeeEEEEcCCCCeEEEEec---C----------CceEEE
Q psy15995        153 GF-YIASG-DI--SGKVRIWDTVNKE--HILKNEFHP-IGGPIKDIAWSPDNQRMVVVGE---G----------RERFGH  212 (683)
Q Consensus       153 ~~-~l~~~-~~--d~~i~iwd~~~~~--~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~---~----------~~~~~~  212 (683)
                      +. +|.++ ..  +.+|.+|++....  ......+.. .-...+++++.++|.+.+....   +          ......
T Consensus       125 g~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~  204 (355)
T 3sre_A          125 NTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSF  204 (355)
T ss_dssp             CCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEE
T ss_pred             CcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccE
Confidence            43 34333 22  5678888776532  222222221 2256789999999986665321   0          112355


Q ss_pred             EEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCC-Cce--eeeccccccCeEEEEECC-CCCEEE
Q psy15995        213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP-FKF--KMTKQEHSRFVQAVRYSP-SGSHFA  288 (683)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~--~~~~~~~~~~v~~~~~~~-~~~~l~  288 (683)
                      ++..+.++ +..+...-...+.++|+|+++.+.++-+..+.|..|++.. ++.  ...+ ......-.+++.+ +|++.+
T Consensus       205 vyr~d~~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwv  282 (355)
T 3sre_A          205 VTYYSPND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWV  282 (355)
T ss_dssp             EEEECTTC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEE
T ss_pred             EEEEECCe-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEE
Confidence            66666553 3334444456789999999998677777889999999753 322  1222 2245567788888 588666


Q ss_pred             EEcCC-CcEEEEeC
Q psy15995        289 SAGFD-GKVFLYDG  301 (683)
Q Consensus       289 ~~~~d-g~i~iw~~  301 (683)
                      ++..+ +.|..|+.
T Consensus       283 a~~~~g~~v~~~~P  296 (355)
T 3sre_A          283 GCHPNGMRIFFYDA  296 (355)
T ss_dssp             EEESCHHHHHSCCT
T ss_pred             EecCCceEEEEECC
Confidence            55433 34444543

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.44  E-value=0.021  Score=52.75  Aligned_cols=146  Identities=15%  Similarity=0.136  Sum_probs=78.9

Q ss_pred             CCCEEEEEcCCC-----cEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeC-------CCeEEEEECCCCccc
Q psy15995        532 EHGLVAVGGADS-----KVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDA-------HRKVVLYRVPDFELA  599 (683)
Q Consensus       532 ~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------d~~i~i~~~~~~~~~  599 (683)
                      ++++++.|+.++     .+.+||..+.+............-.+++. -+++.++.|+.       ...+.+||..+.+..
T Consensus       108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~  186 (302)
T 2xn4_A          108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWT  186 (302)
T ss_dssp             TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred             CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence            567777776543     47889988776443222221111112222 26677777654       245889999876654


Q ss_pred             cccceeeecccEEEEEecCCCCeEEEeecCC-----cEEEEeCCCCceeeEeecCCCCCCeeEEEEccCCeEEEeeCCC-
Q psy15995        600 HNKEWGFHSAKVNCVAWSPDSALVASGSLDT-----TIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDC-  673 (683)
Q Consensus       600 ~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~-----~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~-  673 (683)
                      ..............+.+  ++++++.|+.++     .+.+||+.+.+-.......... .-.+++..++.+++.+|.++ 
T Consensus       187 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r-~~~~~~~~~~~i~v~GG~~~~  263 (302)
T 2xn4_A          187 YIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR-RNAGVCAVNGLLYVVGGDDGS  263 (302)
T ss_dssp             EECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEECCBCSS
T ss_pred             ECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcc-ccCeEEEECCEEEEECCcCCC
Confidence            32221101111112222  678888887653     6899999887654332221111 11233444777888888664 


Q ss_pred             ----cEEEEeec
Q psy15995        674 ----NTKIWEIA  681 (683)
Q Consensus       674 ----~v~vw~~~  681 (683)
                          .+.+||++
T Consensus       264 ~~~~~v~~yd~~  275 (302)
T 2xn4_A          264 CNLASVEYYNPT  275 (302)
T ss_dssp             SBCCCEEEEETT
T ss_pred             cccccEEEEcCC
Confidence                36777664

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.43  E-value=0.075  Score=49.27  Aligned_cols=240  Identities=12%  Similarity=0.026  Sum_probs=120.7

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeecc---ceEEEee-
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI---GFYIASG-  159 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~-  159 (683)
                      .-...+.|+|.|||+++++--..|.|++++..+++... +..-+   .+    ..........++++|+   +.+|... 
T Consensus        30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~-v~~~~---~v----~~~g~~GllGia~~Pdf~~~g~lYv~y  101 (347)
T 3das_A           30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTE-LGEVP---GV----SPSGEGGLLGIALSPDYASDHMVYAYF  101 (347)
T ss_dssp             CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECT---TC----CCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred             CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEee-ecccC---ce----eecCCCCceeeEeccccccCCEEEEEE
Confidence            33456799999999988776558999999866553211 10000   00    0011145678999985   3333322 


Q ss_pred             --cCCccEEEEecccc----------ceeeeccccccCCCeeEEEEcCCCCeEEEEecCCc---------eEEEEEEcc-
Q psy15995        160 --DISGKVRIWDTVNK----------EHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE---------RFGHVFMSE-  217 (683)
Q Consensus       160 --~~d~~i~iwd~~~~----------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~---------~~~~~~~~~-  217 (683)
                        ..++.|.-|.+..+          +.+..............|+|.|||.+.++.+....         ....|+..+ 
T Consensus       102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~  181 (347)
T 3das_A          102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTP  181 (347)
T ss_dssp             ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECT
T ss_pred             ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeC
Confidence              23455666665542          11111111111224567999999976666553211         112333333 


Q ss_pred             CCC--------ceeeee-cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce------------------eeeccc
Q psy15995        218 TGT--------SVGEIS-GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF------------------KMTKQE  270 (683)
Q Consensus       218 ~~~--------~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~------------------~~~~~~  270 (683)
                      .++        ....+. +| .....++|+|++.....--+.++.=.|--+..+..                  +..+..
T Consensus       182 dG~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~  260 (347)
T 3das_A          182 DGEPAPGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWST  260 (347)
T ss_dssp             TSSBCTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECT
T ss_pred             CCCccCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCC
Confidence            222        011111 22 23567899998763222223333222222111111                  111111


Q ss_pred             cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee----EEeccCCccccCeEEEEEccCCCEEEEEE
Q psy15995        271 HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL----VSELGNPAHKGGVYAVAWKPDGTQLLTAS  335 (683)
Q Consensus       271 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  335 (683)
                      +......++|. +|..+...-..+.|....++....    ...+.  .....+..++..|||.++++..
T Consensus       261 ~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~--~~~gR~~dv~~~pDG~lyv~td  326 (347)
T 3das_A          261 DEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLE--GEYGRLRTVAPAGGDKLWLVTS  326 (347)
T ss_dssp             TTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEEST--TTSSCEEEEEEEETTEEEEEEC
T ss_pred             CCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeec--CCCCCccEEEECCCCcEEEEEc
Confidence            22345667766 455566555566777666655432    12222  1346899999999997666644

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.34  E-value=0.098  Score=48.51  Aligned_cols=237  Identities=9%  Similarity=0.031  Sum_probs=123.0

Q ss_pred             CCeEEEeeCCCCCeEEEec-CCeEEEEeCCCCcccc------cccCcccceEEEEECCC----CcEEEEe--cCCCCEEE
Q psy15995         45 GQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISD------IYTEHSCAVNVAKYSPS----GFYIASG--DISGKVRI  111 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~-~~~i~v~~~~~~~~~~------~~~~h~~~v~~~~~s~d----~~~las~--~~dg~i~i  111 (683)
                      ..+..|++.|||+++++.. .|.|.+++..+++...      .+.........|+++||    +.+.++-  ..++.|.-
T Consensus        32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R  111 (347)
T 3das_A           32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR  111 (347)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred             CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence            3678899999999999887 8999999876654321      12234567899999995    4433332  23445666


Q ss_pred             EeCCCccc----ccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC-------------CccEEEEeccccc
Q psy15995        112 WDTVNKEH----ILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI-------------SGKVRIWDTVNKE  174 (683)
Q Consensus       112 wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-------------d~~i~iwd~~~~~  174 (683)
                      |.+..+..    +...+.     -+..+.. ........|+|.|||.+.++.+.             .|.|.-.+....-
T Consensus       112 ~~~~~~~~~~~~~~~~~~-----i~~~~p~-~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i  185 (347)
T 3das_A          112 MLYDEKKPSGEQLGAPDT-----VFRGIPK-GVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP  185 (347)
T ss_dssp             EEBCTTSCTTCCBCCCEE-----EEEEECC-CSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred             EEeCCCCcccccCCCcEE-----EEEcCCC-CCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence            66554211    000000     0000000 01134567999999986666432             2444444443210


Q ss_pred             ----ee--eeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCc------------------eeeeecCCc
Q psy15995        175 ----HI--LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTS------------------VGEISGQSK  230 (683)
Q Consensus       175 ----~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~  230 (683)
                          ..  ...-..++ .....++|.|+|++. ++..+.+..-.+.....|..                  +..+..+..
T Consensus       186 p~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~-~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~  263 (347)
T 3das_A          186 APGNPFPGSPVYSYGH-RNVQGLAWDDKQRLF-ASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEA  263 (347)
T ss_dssp             CTTCSSTTCCEEEBCC-SBCCEEEECTTCCEE-EEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTC
T ss_pred             cCCCCCCCCeEEeeCC-CCcceEEECCCCCEE-EEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCC
Confidence                00  00001111 346789999987644 44433322223333333221                  111122223


Q ss_pred             CeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce----eeeccccccCeEEEEECCCCCEEEEEc
Q psy15995        231 PINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF----KMTKQEHSRFVQAVRYSPSGSHFASAG  291 (683)
Q Consensus       231 ~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~  291 (683)
                      ....++|.. +. +++..-..+.|....+...+.    ...+.+....+..++..|||.++++..
T Consensus       264 ap~G~~~~~-g~-~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td  326 (347)
T 3das_A          264 SPSGIAYAE-GS-VWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS  326 (347)
T ss_dssp             CEEEEEEET-TE-EEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred             CCcceEEEc-Cc-eeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence            456677764 33 355555556666555544322    223344456789999999987555443

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.30  E-value=0.11  Score=48.03  Aligned_cols=232  Identities=12%  Similarity=-0.023  Sum_probs=113.5

Q ss_pred             CcEEEEecC--CCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC----ccEEEEec
Q psy15995         97 GFYIASGDI--SGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS----GKVRIWDT  170 (683)
Q Consensus        97 ~~~las~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----~~i~iwd~  170 (683)
                      +..++.|+.  ...+.++|..+.+-...-.. +  .           ......+..-++..++.|+.+    ..+.+||.
T Consensus        12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~-p--~-----------~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~   77 (306)
T 3ii7_A           12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCP-F--E-----------KRRDAACVFWDNVVYILGGSQLFPIKRMDCYNV   77 (306)
T ss_dssp             CEEEEEECCSSTTSEEEEETTTTEEEECCCC-S--C-----------CCBSCEEEEETTEEEEECCBSSSBCCEEEEEET
T ss_pred             ceEEEEeCCCCCceEEEecCCCCCEecCCCC-C--c-----------ccceeEEEEECCEEEEEeCCCCCCcceEEEEeC
Confidence            345556654  35689999887753321110 0  0           001111222366677777754    66889999


Q ss_pred             cccceeeeccccccCCCeeEEEEcCCCCeEEEEecC-C---ceEEEEEEccCCCcee--eeecCCcCeEEEEeecCCCeE
Q psy15995        171 VNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEG-R---ERFGHVFMSETGTSVG--EISGQSKPINSCDFKPSRPFR  244 (683)
Q Consensus       171 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~-~---~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~  244 (683)
                      .+++-.....++.....-....+  +++.+++++.+ .   ...+.+++..+.+-..  .+......- +++. -++. +
T Consensus        78 ~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~-i  152 (306)
T 3ii7_A           78 VKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH-GMVE-ANGL-I  152 (306)
T ss_dssp             TTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTE-E
T ss_pred             CCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee-EEEE-ECCE-E
Confidence            88754332222221111122222  45555554432 1   1124555555443211  111111111 1122 2444 4


Q ss_pred             EEEeeC---------CCeEEEEcCCCCceeeeccc--cccCeEEEEECCCCCEEEEEcCC-----CcEEEEeCCCCeeEE
Q psy15995        245 IITGSE---------DNTIAVFEGPPFKFKMTKQE--HSRFVQAVRYSPSGSHFASAGFD-----GKVFLYDGASADLVS  308 (683)
Q Consensus       245 l~~~~~---------d~~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~  308 (683)
                      ++.|+.         -..+.+||..+.+....-..  ....-..+.+  +++.++.|+.+     ..+.+||..+.+...
T Consensus       153 yv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~  230 (306)
T 3ii7_A          153 YVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM  230 (306)
T ss_dssp             EEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEE
T ss_pred             EEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEE
Confidence            666653         34588899877764433211  1111122222  56667776653     468999998876654


Q ss_pred             eccCCccccCeEEEEEccCCCEEEEEECC-----CcEEEEECCCCcee
Q psy15995        309 ELGNPAHKGGVYAVAWKPDGTQLLTASGD-----KTCKLWDIETKSVV  351 (683)
Q Consensus       309 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~  351 (683)
                      .-..+........+.+  +++.++.|+.+     ..+.+||+.+.+-.
T Consensus       231 ~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~  276 (306)
T 3ii7_A          231 VSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKWV  276 (306)
T ss_dssp             CCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEEE
T ss_pred             CCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeEE
Confidence            4332222222233333  56777777754     45888998876644

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=97.27  E-value=0.13  Score=48.50  Aligned_cols=62  Identities=15%  Similarity=0.110  Sum_probs=40.0

Q ss_pred             cCeEEEEECC-------CCCEEEEEcCCCcEEEEeCCCCeeEEeccC-CccccCeEEEEEccCCCEEEEE
Q psy15995        273 RFVQAVRYSP-------SGSHFASAGFDGKVFLYDGASADLVSELGN-PAHKGGVYAVAWKPDGTQLLTA  334 (683)
Q Consensus       273 ~~v~~~~~~~-------~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~  334 (683)
                      ..+..++|..       +|+++++.-..+.|...+++.++....... ......+..+++.|||.++++.
T Consensus       271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t  340 (353)
T 2g8s_A          271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT  340 (353)
T ss_dssp             CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred             cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence            3566777763       466777666778888888776544322111 1123578999999999865543

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.27  E-value=0.084  Score=48.79  Aligned_cols=235  Identities=11%  Similarity=0.078  Sum_probs=111.8

Q ss_pred             eeCCCCCeEEEec-----CCeEEEEeCCCCccccc--ccCcccceEEEEECCCCcEEEEecC----C-----CCEEEEeC
Q psy15995         51 GGDPKGKNFLYTN-----GNSVIIRNIENPAISDI--YTEHSCAVNVAKYSPSGFYIASGDI----S-----GKVRIWDT  114 (683)
Q Consensus        51 ~~s~~~~~l~~~~-----~~~i~v~~~~~~~~~~~--~~~h~~~v~~~~~s~d~~~las~~~----d-----g~i~iwd~  114 (683)
                      +..-+++++++|.     -..+.+||..+.+-...  +......-..+.  .+++.++.|+.    +     ..+.++|.
T Consensus        20 ~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~d~   97 (308)
T 1zgk_A           20 APKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV--VGGLLYAVGGRNNSPDGNTDSSALDCYNP   97 (308)
T ss_dssp             -CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCEEEETTEEEECCCEEEEET
T ss_pred             ccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE--ECCEEEEECCCcCCCCCCeecceEEEECC
Confidence            3455666666664     24788999887643211  111111111222  26777777765    2     36889998


Q ss_pred             CCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC-----ccEEEEeccccceeeeccccccCCCee
Q psy15995        115 VNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS-----GKVRIWDTVNKEHILKNEFHPIGGPIK  189 (683)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~i~  189 (683)
                      .+.+....-.. +  .+          ..-..+ ..-+++.++.|+.+     ..+.+||+.+.+-.....++.....-.
T Consensus        98 ~~~~W~~~~~~-p--~~----------r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~  163 (308)
T 1zgk_A           98 MTNQWSPCAPM-S--VP----------RNRIGV-GVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVG  163 (308)
T ss_dssp             TTTEEEECCCC-S--SC----------CBTCEE-EEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred             CCCeEeECCCC-C--cC----------ccccEE-EEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceE
Confidence            87643221110 0  00          011111 22266777777644     358889988765332222222111112


Q ss_pred             EEEEcCCCCeEEEEecCCc---eEEEEEEccCCCce--eeeecCCcCeEEEEeecCCCeEEEEeeCC-----CeEEEEcC
Q psy15995        190 DIAWSPDNQRMVVVGEGRE---RFGHVFMSETGTSV--GEISGQSKPINSCDFKPSRPFRIITGSED-----NTIAVFEG  259 (683)
Q Consensus       190 ~~~~s~~~~~l~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~i~iw~~  259 (683)
                      .+.+  +++.++.++.+..   ..+.+++..+.+-.  ..+......-..+.+  ++. +++.|+.+     ..+.+||.
T Consensus       164 ~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~  238 (308)
T 1zgk_A          164 VAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNC-IYAAGGYDGQDQLNSVERYDV  238 (308)
T ss_dssp             EEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEET
T ss_pred             EEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCE-EEEEeCCCCCCccceEEEEeC
Confidence            2222  4544444443321   12455555443211  111111111122222  444 57777654     56889998


Q ss_pred             CCCceeeecc--ccccCeEEEEECCCCCEEEEEcCC-----CcEEEEeCCCCeeEE
Q psy15995        260 PPFKFKMTKQ--EHSRFVQAVRYSPSGSHFASAGFD-----GKVFLYDGASADLVS  308 (683)
Q Consensus       260 ~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~  308 (683)
                      .+.+....-.  ........+.+  +++.++.|+.+     ..+.+||+.+.+...
T Consensus       239 ~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~  292 (308)
T 1zgk_A          239 ETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTWSE  292 (308)
T ss_dssp             TTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred             CCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence            8766544321  11111222222  56677777643     357888887776543

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=97.26  E-value=0.072  Score=49.51  Aligned_cols=112  Identities=14%  Similarity=0.184  Sum_probs=61.0

Q ss_pred             cCCCEEEEEcC------CCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCC-----CeEEEEECCCCccc
Q psy15995        531 HEHGLVAVGGA------DSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAH-----RKVVLYRVPDFELA  599 (683)
Q Consensus       531 ~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~i~~~~~~~~~  599 (683)
                      .++++++.|+.      -..+.+||..+.+............-.+++. -+++.++.|+.+     ..+.+||+.+.+..
T Consensus       157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~  235 (318)
T 2woz_A          157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWE  235 (318)
T ss_dssp             ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred             ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence            46677777764      2358999998876443222221111112222 266777777643     35778999876654


Q ss_pred             cccceeeecccEEEEEecCCCCeEEEeecC--------------CcEEEEeCCCCceeeE
Q psy15995        600 HNKEWGFHSAKVNCVAWSPDSALVASGSLD--------------TTIIIWSLASPAKHII  645 (683)
Q Consensus       600 ~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d--------------~~v~iw~~~~~~~~~~  645 (683)
                      ..............+  ..++++++.|+.+              ..+.+||+.+.+-...
T Consensus       236 ~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~  293 (318)
T 2woz_A          236 VMTEFPQERSSISLV--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM  293 (318)
T ss_dssp             ECCCCSSCCBSCEEE--EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred             ECCCCCCcccceEEE--EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence            332221011111122  2367788887754              3578888887665444

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.18  E-value=0.14  Score=47.16  Aligned_cols=234  Identities=12%  Similarity=0.076  Sum_probs=113.3

Q ss_pred             CCCcEEEEecCC----CCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC----C----
Q psy15995         95 PSGFYIASGDIS----GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI----S----  162 (683)
Q Consensus        95 ~d~~~las~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----d----  162 (683)
                      -+++.++.|+.+    ..+.++|..+.+....-. .+  .+          ..-..++ .-++..++.|+.    +    
T Consensus        23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~-~p--~~----------r~~~~~~-~~~~~lyv~GG~~~~~~~~~~   88 (308)
T 1zgk_A           23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLAD-LQ--VP----------RSGLAGC-VVGGLLYAVGGRNNSPDGNTD   88 (308)
T ss_dssp             CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCC-CS--SC----------CBSCEEE-EETTEEEEECCEEEETTEEEE
T ss_pred             CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCC-CC--cc----------cccceEE-EECCEEEEECCCcCCCCCCee
Confidence            456667777632    358889987765332211 00  00          0111122 236667777765    2    


Q ss_pred             -ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCc---eEEEEEEccCCCce--eeeecCCcCeEEEE
Q psy15995        163 -GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE---RFGHVFMSETGTSV--GEISGQSKPINSCD  236 (683)
Q Consensus       163 -~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~v~~~~  236 (683)
                       ..+.+||+.+++-.....++.....-....+  +++.+++++.+..   ..+.+++..+.+-.  ..+......-..+.
T Consensus        89 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~  166 (308)
T 1zgk_A           89 SSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV  166 (308)
T ss_dssp             CCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred             cceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE
Confidence             4688899887653322222221112222222  4555554442221   12445555443211  11111111112222


Q ss_pred             eecCCCeEEEEeeCC-----CeEEEEcCCCCceeeecc--ccccCeEEEEECCCCCEEEEEcCC-----CcEEEEeCCCC
Q psy15995        237 FKPSRPFRIITGSED-----NTIAVFEGPPFKFKMTKQ--EHSRFVQAVRYSPSGSHFASAGFD-----GKVFLYDGASA  304 (683)
Q Consensus       237 ~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~  304 (683)
                      +  ++. +++.|+.+     ..+.+||..+.+....-.  .....-.++.+  +++.++.|+.+     ..+.+||+.+.
T Consensus       167 ~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~  241 (308)
T 1zgk_A          167 L--NRL-LYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE  241 (308)
T ss_dssp             E--TTE-EEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred             E--CCE-EEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence            2  444 46666654     458888887765443221  11111222233  56677777654     56999999888


Q ss_pred             eeEEeccCCccccCeEEEEEccCCCEEEEEECC-----CcEEEEECCCCcee
Q psy15995        305 DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD-----KTCKLWDIETKSVV  351 (683)
Q Consensus       305 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~  351 (683)
                      +....-..+........+.+  +++.++.|+.+     ..+.+||+.+.+..
T Consensus       242 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~  291 (308)
T 1zgk_A          242 TWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTWS  291 (308)
T ss_dssp             EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred             cEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence            76554332222222222222  56777777644     34778888876543

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=97.08  E-value=0.033  Score=60.85  Aligned_cols=253  Identities=14%  Similarity=0.117  Sum_probs=141.7

Q ss_pred             eCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCc-ccccccccccCCC
Q psy15995         52 GDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNK-EHILKNEFHPIGG  130 (683)
Q Consensus        52 ~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~-~~~~~~~~~~~~~  130 (683)
                      .+|..+.||.-.+..+.|+|+++.+.++.+.- ..+|.-=.|-.+. .|+-.+. ..|.-|++... .+...+..++.  
T Consensus        73 MnP~~~iiALrag~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~-~l~lVT~-~aVyHW~~~~~s~P~k~fdR~~~--  147 (1630)
T 1xi4_A           73 MNPASKVIALKAGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVTD-NAVYHWSMEGESQPVKMFDRHSS--  147 (1630)
T ss_pred             cCCCcceEEEecCCeEEEeehHHhhhhccccc-CCCceEEEecCCC-eeEEEcC-CeEEEeccCCCCccHHHHhcchh--
Confidence            58999999999999999999999988776653 3456666776555 3444333 36999999753 23333333321  


Q ss_pred             CcccceeeeeecceeeeEeeccceEEEeec-------CCccEEEEeccccceeeeccccccCCCeeEEEEcC--CCCeEE
Q psy15995        131 PIKDIGTLLSLTSIRNILVLSIGFYIASGD-------ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSP--DNQRMV  201 (683)
Q Consensus       131 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~  201 (683)
                             + ....|.....+++.+|++..+       -.|.+.+|+.+.+.   ...+.+|.+.-..+....  ....+.
T Consensus       148 -------L-~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~---sQ~iegha~~F~~~~~~~~~~~~~l~  216 (1630)
T 1xi4_A          148 -------L-AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV---SQPIEGHAASFAQFKMEGNAEESTLF  216 (1630)
T ss_pred             -------c-ccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc---chhhhHhHhhhheeccCCCCCCceEE
Confidence                   1 125677778888888887533       35889999987653   233444433332222221  111121


Q ss_pred             EEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEEC
Q psy15995        202 VVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYS  281 (683)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~  281 (683)
                      +.......-..+...+-+.....-.........+-|.|                             ....+...++..+
T Consensus       217 ~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~-----------------------------~~~~Dfpv~~~vs  267 (1630)
T 1xi4_A          217 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP-----------------------------EAQNDFPVAMQIS  267 (1630)
T ss_pred             EEEEecCCCceEEEEecCCCccCCCCCccccccccCCc-----------------------------ccccCcceEEEec
Confidence            11111000001111111100000000000011111111                             1123445678888


Q ss_pred             CCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCcee
Q psy15995        282 PSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVV  351 (683)
Q Consensus       282 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  351 (683)
                      +.-..+...+.-|.+.++|+.++.++..-+.  ...+|...+......-++.....|.|.-..+.....+
T Consensus       268 ~k~g~iy~itk~G~~~~~d~~t~~~i~~~ri--s~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv  335 (1630)
T 1xi4_A          268 EKHDVVFLITKYGYIHLYDLETGTCIYMNRI--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII  335 (1630)
T ss_pred             cccCEEEEEecCceEEEEecccchhhhhccc--cCCceEEeccCCCCCceEEEcCCceEEEEEEccchhh
Confidence            8878888888899999999999998877654  5566666665554445666667777766666554443

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=97.07  E-value=0.022  Score=54.08  Aligned_cols=115  Identities=10%  Similarity=0.070  Sum_probs=55.2

Q ss_pred             CCCEEEEEcC------CCcEEEEEc--CCCccCcceeecCC-cCeeEEEECCCCCEEEEEeCC-----------------
Q psy15995        532 EHGLVAVGGA------DSKVHIYEL--NNKSLSPKAELDHL-GPVTDCSFSPSNEYLVASDAH-----------------  585 (683)
Q Consensus       532 ~~~~l~~~~~------dg~i~i~d~--~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----------------  585 (683)
                      ++++++.|+.      ...+..||+  .+.+.......... ......+...++++++.|+.+                 
T Consensus       200 ~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~  279 (357)
T 2uvk_A          200 GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHE  279 (357)
T ss_dssp             TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTT
T ss_pred             CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccc
Confidence            5667777654      345777876  44433222111111 111111223366777777632                 


Q ss_pred             -----CeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCC------cEEEEeCCCCceeeEeec
Q psy15995        586 -----RKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDT------TIIIWSLASPAKHIIIKN  648 (683)
Q Consensus       586 -----~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~------~v~iw~~~~~~~~~~~~~  648 (683)
                           ..+.+||+.+.+........  .......+...++++++.|+.++      .|.++++++++.......
T Consensus       280 ~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~  351 (357)
T 2uvk_A          280 GLKKSYSTDIHLWHNGKWDKSGELS--QGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE  351 (357)
T ss_dssp             TCCCEECCEEEECC---CEEEEECS--SCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred             cccceeeEEEEecCCCceeeCCCCC--CCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence                 25789999876654322211  11111122334788888888653      466678888776655443

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.04  E-value=0.2  Score=46.39  Aligned_cols=215  Identities=10%  Similarity=0.039  Sum_probs=103.7

Q ss_pred             EEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEec-----CC--ceE--EEEEEccCCCceeee
Q psy15995        155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE-----GR--ERF--GHVFMSETGTSVGEI  225 (683)
Q Consensus       155 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----~~--~~~--~~~~~~~~~~~~~~~  225 (683)
                      .++.|+  ..+.+||..+++-.. ..++.........+...+++.++.++.     ..  ...  +..++..+++- ..+
T Consensus         7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W-~~~   82 (315)
T 4asc_A            7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW-LGM   82 (315)
T ss_dssp             EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE-EEC
T ss_pred             EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE-EEC
Confidence            444555  578999998876432 222211123333344456676666663     11  111  33444444321 111


Q ss_pred             ecCCcCe--EEEEeecCCCeEEEEeeCC--------CeEEEEcCCCCceeeecc--ccccCeEEEEECCCCCEEEEEcC-
Q psy15995        226 SGQSKPI--NSCDFKPSRPFRIITGSED--------NTIAVFEGPPFKFKMTKQ--EHSRFVQAVRYSPSGSHFASAGF-  292 (683)
Q Consensus       226 ~~~~~~v--~~~~~~~~~~~~l~~~~~d--------~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-  292 (683)
                      ..-..+-  .+++.. ++. +++.|+.+        ..+.+||..+.+....-.  .....-..+.  .+++.++.|+. 
T Consensus        83 ~~~p~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~  158 (315)
T 4asc_A           83 PPLPSPRCLFGLGEA-LNS-IYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKG  158 (315)
T ss_dssp             CCBSSCEESCEEEEE-TTE-EEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBC
T ss_pred             CCCCcchhceeEEEE-CCE-EEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCC
Confidence            1111111  111222 343 46666632        458889987765443221  1111112222  35666777765 


Q ss_pred             C-----CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC-----cEEEEECCCCceeeEEEecCccee
Q psy15995        293 D-----GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK-----TCKLWDIETKSVVSEFIMGNQVED  362 (683)
Q Consensus       293 d-----g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~  362 (683)
                      +     ..+.+||..+.+....-..+.....-..+.+  +++.++.|+.++     .+.+||+.+.+-...-.. .....
T Consensus       159 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~  235 (315)
T 4asc_A          159 SDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAF-PQERS  235 (315)
T ss_dssp             TTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCC-SSCCB
T ss_pred             CCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCC-CCccc
Confidence            2     4689999988766544332222222222222  567777777654     488899987754332111 11122


Q ss_pred             ceEEEEecCCEEEEEecC
Q psy15995        363 QQVSCLWQGDYLLTVSLS  380 (683)
Q Consensus       363 ~~~~~~~~~~~l~~~~~~  380 (683)
                      ....+..++..++.|+.+
T Consensus       236 ~~~~~~~~~~l~v~GG~~  253 (315)
T 4asc_A          236 SLSLVSLVGTLYAIGGFA  253 (315)
T ss_dssp             SCEEEEETTEEEEEEEEE
T ss_pred             ceeEEEECCEEEEECCcc
Confidence            222333466666666653

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=97.04  E-value=0.28  Score=47.96  Aligned_cols=113  Identities=12%  Similarity=0.105  Sum_probs=60.1

Q ss_pred             ceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeecc---ceEE-EeecC-
Q psy15995         87 AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSI---GFYI-ASGDI-  161 (683)
Q Consensus        87 ~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l-~~~~~-  161 (683)
                      ..+.|+|.|||+++++-...+.|++++..+++..........   .   ...........++|+|+   +.+| ++-+. 
T Consensus        28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~---~---~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~  101 (454)
T 1cru_A           28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEI---V---NDADGQNGLLGFAFHPDFKNNPYIYISGTFK  101 (454)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTC---C---CCTTSSCSEEEEEECTTTTTSCEEEEEEEEE
T ss_pred             CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCcc---c---cccCCCCceeEEEECCCcCcCCEEEEEEecc
Confidence            557999999999887754445688887654432111111100   0   00001145668999995   4444 33321 


Q ss_pred             -----------CccEEEEecccc-------ceeeeccccccCCCeeEEEEcCCCCeEEEEec
Q psy15995        162 -----------SGKVRIWDTVNK-------EHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE  205 (683)
Q Consensus       162 -----------d~~i~iwd~~~~-------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  205 (683)
                                 ...|.-+++..+       +.+..............|+|.|||.+.++.+.
T Consensus       102 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          102 NPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             CTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             ccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence                       234555555332       11111111111234789999999987777664

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=97.04  E-value=0.27  Score=47.86  Aligned_cols=267  Identities=9%  Similarity=0.079  Sum_probs=142.8

Q ss_pred             EEEEEcCCCcEEEEeCCCCeeEEeccCCc-----------------------cccCeE--EEEEc---cCCCEEEEEEC-
Q psy15995        286 HFASAGFDGKVFLYDGASADLVSELGNPA-----------------------HKGGVY--AVAWK---PDGTQLLTASG-  336 (683)
Q Consensus       286 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-----------------------~~~~i~--~~~~~---~~~~~l~~~~~-  336 (683)
                      .+.+|+..|.|+++-+.+++.+..+....                       ..+...  .+++.   .||++|+.-.. 
T Consensus        72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka  151 (638)
T 3sbq_A           72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA  151 (638)
T ss_dssp             EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred             EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence            36788899999999999998877764310                       011122  23332   26778888764 


Q ss_pred             CCcEEEEECCCCceeeEEEecCcceeceEEEE--ecCCEEEEEecCCcEE-----EEecCCCCcceeee---eeccc---
Q psy15995        337 DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCL--WQGDYLLTVSLSGFIS-----YLDVNNPSTPIRVI---KGHNK---  403 (683)
Q Consensus       337 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~g~i~-----~~~~~~~~~~~~~~---~~~~~---  403 (683)
                      +..+...++...+.-+.+..........+.+.  |+..+++++++...-.     ...+..... ...+   .+..-   
T Consensus       152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~-y~~f~~iD~~tm~v~  230 (638)
T 3sbq_A          152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENS-YTMYNAIDAETMEMA  230 (638)
T ss_dssp             TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTE-EEEEEEEETTTCSEE
T ss_pred             CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhh-ceEEEEEcCCccEEE
Confidence            56688889998888777777766666666665  5778888887632110     011111111 0111   11111   


Q ss_pred             -------cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEe--------CCeEEEEEcCC-eE
Q psy15995        404 -------PITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT--------GELLYTCGIDD-TI  467 (683)
Q Consensus       404 -------~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~l~~~~~d~-~i  467 (683)
                             ....+...+++++.++.+.+.       +.+.............+..+.+.        |+.-.   .++ .+
T Consensus       231 ~Qv~v~gnld~~~~~~~g~~af~t~yNs-------E~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~---~~g~gv  300 (638)
T 3sbq_A          231 FQVIVDGNLDNTDADYTGRFAAATCYNS-------EKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFIT---LGDSKT  300 (638)
T ss_dssp             EEEEESSCCCCEEECSSSSEEEEEESCT-------TCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBC---CTTCCC
T ss_pred             EEEEcCCChhhcCCCCCCCEEEEeeecc-------ccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEE---ECCCCe
Confidence                   111222334444444444321       11111111111111111111111        11110   010 23


Q ss_pred             EEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcC-CCcEE
Q psy15995        468 KQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGA-DSKVH  546 (683)
Q Consensus       468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~  546 (683)
                      .+.|.+....                                ........+|....+..+.++|||+++++++. +.++.
T Consensus       301 ~ViD~~~~~~--------------------------------~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvt  348 (638)
T 3sbq_A          301 PVLDGRKKDG--------------------------------KDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCS  348 (638)
T ss_dssp             CEEECSCBTT--------------------------------BCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEE
T ss_pred             eEEccccccc--------------------------------cCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEE
Confidence            3333332000                                00123445566778899999999999988765 78899


Q ss_pred             EEEcCCCc------c-Cc----ceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCC
Q psy15995        547 IYELNNKS------L-SP----KAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPD  595 (683)
Q Consensus       547 i~d~~~~~------~-~~----~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~  595 (683)
                      ++|++.-.      + .+    .....-.......+|.++|.-..+-.-|.+|.-|++..
T Consensus       349 V~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~  408 (638)
T 3sbq_A          349 MIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE  408 (638)
T ss_dssp             EEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred             EEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence            99987421      1 00    11122345678899999996556667899999999974

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=96.94  E-value=0.25  Score=46.00  Aligned_cols=197  Identities=19%  Similarity=0.198  Sum_probs=113.5

Q ss_pred             ceeeeEeeccceEEEee------------cCCccEEEEeccccc-eeeeccccc-----cCCCeeEEEEcC--CCC-eEE
Q psy15995        143 SIRNILVLSIGFYIASG------------DISGKVRIWDTVNKE-HILKNEFHP-----IGGPIKDIAWSP--DNQ-RMV  201 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~~~------------~~d~~i~iwd~~~~~-~~~~~~~~~-----~~~~i~~~~~s~--~~~-~l~  201 (683)
                      ....+++.|+|..++++            ..+|.|.++|+.+.. ......+..     .......+.+.+  +++ +|+
T Consensus        51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~  130 (355)
T 3sre_A           51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL  130 (355)
T ss_dssp             CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred             CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence            34566778887665555            268999999987421 112222222     234667777766  454 566


Q ss_pred             EEecCC-ceEEEEEEccCCCc----eeeeecC-CcCeEEEEeecCCCeEEEEee-----------------CCCeEEEEc
Q psy15995        202 VVGEGR-ERFGHVFMSETGTS----VGEISGQ-SKPINSCDFKPSRPFRIITGS-----------------EDNTIAVFE  258 (683)
Q Consensus       202 ~~~~~~-~~~~~~~~~~~~~~----~~~~~~~-~~~v~~~~~~~~~~~~l~~~~-----------------~d~~i~iw~  258 (683)
                      ++.... ...+.++..+.+..    +..+.+. -...+.+.+.++|.+ .++..                 ..|.+..++
T Consensus       131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~f-yvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d  209 (355)
T 3sre_A          131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHF-YATNDHYFIDPYLKSWEMHLGLAWSFVTYYS  209 (355)
T ss_dssp             EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEE-EEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred             EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCE-EecCCcEeCCcccccchhhccCCccEEEEEE
Confidence            654442 34466777665422    2223222 345789999999974 44432                 124455555


Q ss_pred             CCCCceeeeccccccCeEEEEECCCCCEEEEEc-CCCcEEEEeCCC-Cee--EEeccCCccccCeEEEEEcc-CCCEEEE
Q psy15995        259 GPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAG-FDGKVFLYDGAS-ADL--VSELGNPAHKGGVYAVAWKP-DGTQLLT  333 (683)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~-~~~--~~~~~~~~~~~~i~~~~~~~-~~~~l~~  333 (683)
                      .  ++.. .+...-...+.++|+||++.|+.+. ..+.|..|++.. ++.  ...+.   ..+..-.+++.+ +|++.++
T Consensus       210 ~--~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~---~~g~PDGi~vD~e~G~lwva  283 (355)
T 3sre_A          210 P--NDVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS---FDTLVDNISVDPVTGDLWVG  283 (355)
T ss_dssp             T--TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE---CSSEEEEEEECTTTCCEEEE
T ss_pred             C--CeEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe---CCCCCceEEEeCCCCcEEEE
Confidence            4  3322 2222334578899999998776654 578899999863 332  12222   245677889998 5887776


Q ss_pred             EECC-CcEEEEECC
Q psy15995        334 ASGD-KTCKLWDIE  346 (683)
Q Consensus       334 ~~~d-g~i~iwd~~  346 (683)
                      +..+ +.|..|+..
T Consensus       284 ~~~~g~~v~~~~P~  297 (355)
T 3sre_A          284 CHPNGMRIFFYDAE  297 (355)
T ss_dssp             EESCHHHHHSCCTT
T ss_pred             ecCCceEEEEECCC
Confidence            6543 234444443

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=96.83  E-value=0.31  Score=45.19  Aligned_cols=213  Identities=11%  Similarity=0.069  Sum_probs=105.9

Q ss_pred             EEEeeCCCeEEEEcCCCCceeeec-cccccCeEEEEECCCCCEEEEEcC----CC-------cEEEEeCCCCeeEEeccC
Q psy15995        245 IITGSEDNTIAVFEGPPFKFKMTK-QEHSRFVQAVRYSPSGSHFASAGF----DG-------KVFLYDGASADLVSELGN  312 (683)
Q Consensus       245 l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~----dg-------~i~iw~~~~~~~~~~~~~  312 (683)
                      ++.|+.  .+..||..+.+....- ..............++..++.|+.    ++       .+..||..+.+....-..
T Consensus        19 ~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~   96 (318)
T 2woz_A           19 LLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPL   96 (318)
T ss_dssp             EEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCB
T ss_pred             hhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCC
Confidence            455553  3788888777654421 111122233334567778888873    12       177889888776544322


Q ss_pred             CccccCeEEEEEccCCCEEEEEECC-------CcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEec------
Q psy15995        313 PAHKGGVYAVAWKPDGTQLLTASGD-------KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSL------  379 (683)
Q Consensus       313 ~~~~~~i~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------  379 (683)
                      +.....-..+.+  +++.++.|+.+       ..+.+||+.+.+....-..... .........++..++.|+.      
T Consensus        97 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~  173 (318)
T 2woz_A           97 PSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK-VYGHNVISHNGMIYCLGGKTDDKKC  173 (318)
T ss_dssp             SSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC-EESCEEEEETTEEEEECCEESSSCB
T ss_pred             CccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc-ccccEEEEECCEEEEEcCCCCCCCc
Confidence            222222222222  56777777754       2478888887654332211111 2222333356666677664      


Q ss_pred             CCcEEEEecCCCCc-ceeeeeeccccEEEEEEeCCCCEEEEEeCC-----CcEEEEcCCCCCcceeccCCCCc-ceeEEE
Q psy15995        380 SGFISYLDVNNPST-PIRVIKGHNKPITALALSPDRGTVFTGSHD-----GFITRWNAKTGENDRVQGAGHGN-QINGMK  452 (683)
Q Consensus       380 ~g~i~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~w~~~~~~~~~~~~~~~~~-~v~~~~  452 (683)
                      ...+..||+....- .+..+....... +++. -+++.++.|+.+     ..+.+||+.+.+........... ....+.
T Consensus       174 ~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~  251 (318)
T 2woz_A          174 TNRVFIYNPKKGDWKDLAPMKTPRSMF-GVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS  251 (318)
T ss_dssp             CCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE
T ss_pred             cceEEEEcCCCCEEEECCCCCCCcccc-eEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE
Confidence            23588888875321 111111111111 2222 256677777643     35778998887655443222211 122233


Q ss_pred             EeCCeEEEEEcC
Q psy15995        453 ATGELLYTCGID  464 (683)
Q Consensus       453 ~~~~~l~~~~~d  464 (683)
                      ..+..++.|+.+
T Consensus       252 ~~~~i~v~GG~~  263 (318)
T 2woz_A          252 LAGSLYAIGGFA  263 (318)
T ss_dssp             ETTEEEEECCBC
T ss_pred             ECCEEEEECCee
Confidence            335555665543

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=96.76  E-value=0.018  Score=48.45  Aligned_cols=142  Identities=9%  Similarity=-0.007  Sum_probs=83.2

Q ss_pred             CeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccce--------EEEEECCCCcEEEEecCCCCEEEEeCCCc
Q psy15995         46 QPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAV--------NVAKYSPSGFYIASGDISGKVRIWDTVNK  117 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v--------~~~~~s~d~~~las~~~dg~i~iwd~~~~  117 (683)
                      ....++|+|+|.+.+. .++.++-.+..+..... +-+-...|        .++.|.|+|.+.++  .||.|.-|+-.+.
T Consensus        42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~-W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~  117 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDN-WMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS  117 (236)
T ss_dssp             TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCC-HHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred             cceeEEECCCccEEEE-eCCeEEEECCCCCCccc-ccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence            5668999999998888 77888777765533221 11123334        78999999988888  5588887775332


Q ss_pred             ccccccccccCCCCcccceeee---eecceeeeEeeccceEEEeecCCccEEEEeccccceee---ecc-cc-ccCCCee
Q psy15995        118 EHILKNEFHPIGGPIKDIGTLL---SLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHIL---KNE-FH-PIGGPIK  189 (683)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~---~~~-~~-~~~~~i~  189 (683)
                      ..-.-+          ..+...   ....+..+.+.|+|.+-++.  |+.+.-+....+....   ... +. ..-....
T Consensus       118 ~~~~Wl----------~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr  185 (236)
T 1tl2_A          118 DTDNWI----------ARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFK  185 (236)
T ss_dssp             TTCCHH----------HHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEE
T ss_pred             CCCcee----------ccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEE
Confidence            111000          000111   12567899999999887777  6665433332211000   000 00 1112345


Q ss_pred             EEEEcCCCCeEEEE
Q psy15995        190 DIAWSPDNQRMVVV  203 (683)
Q Consensus       190 ~~~~s~~~~~l~~~  203 (683)
                      .+.|.|++...++.
T Consensus       186 ~l~f~~~G~l~~v~  199 (236)
T 1tl2_A          186 FLFFSSVGTLFGVQ  199 (236)
T ss_dssp             EEEECTTSCEEEEE
T ss_pred             EEEECCCCcEEEEe
Confidence            57789988877776

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=96.72  E-value=0.089  Score=44.32  Aligned_cols=146  Identities=12%  Similarity=-0.002  Sum_probs=83.1

Q ss_pred             CCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcC--------eeEEEECCCCCEEEEEeCCCeEEEEECC
Q psy15995        523 EPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGP--------VTDCSFSPSNEYLVASDAHRKVVLYRVP  594 (683)
Q Consensus       523 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~--------v~~~~~s~~~~~l~~~~~d~~i~i~~~~  594 (683)
                      .+..++++|++.+.++  .+|.++-.+..+.....-.  +....        -.++.|.|+|.+.++  .||.|+-++-+
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~--~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP  115 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWM--GRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPP  115 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHH--HHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCCCCCccccc--ccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence            5679999999987777  6776666554432211100  11122        378999999988888  56988888765


Q ss_pred             CCcc---ccccceeeec---ccEEEEEecCCCCeEEEeecCCcEEEEeCCCCcee-----eEeecCCCCCCeeEEEEccC
Q psy15995        595 DFEL---AHNKEWGFHS---AKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKH-----IIIKNAHPQSQITRLQWLDN  663 (683)
Q Consensus       595 ~~~~---~~~~~~~~h~---~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~  663 (683)
                      +...   +.....- ..   ..+..|.|.|+|.+-+..  |+.++-+...+....     ........-..-+.+.|.++
T Consensus       116 ~~~~~~Wl~~a~~v-g~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~  192 (236)
T 1tl2_A          116 QSDTDNWIARATEV-GSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSV  192 (236)
T ss_dssp             CSTTCCHHHHSEEE-ECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTT
T ss_pred             cCCCCceeccccEe-ccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCC
Confidence            4221   1111110 12   568999999999888777  777554444322211     11111011223344667765


Q ss_pred             CeEEEeeCCCcEEEEee
Q psy15995        664 DLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       664 ~~l~s~~~d~~v~vw~~  680 (683)
                      ..|..+. ++  ++|..
T Consensus       193 G~l~~v~-~g--~~Y~~  206 (236)
T 1tl2_A          193 GTLFGVQ-GG--KFYED  206 (236)
T ss_dssp             SCEEEEE-TT--EEEEE
T ss_pred             CcEEEEe-CC--eEEec
Confidence            5555555 66  44544

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=96.64  E-value=0.2  Score=47.43  Aligned_cols=229  Identities=11%  Similarity=0.018  Sum_probs=109.6

Q ss_pred             EEEEeeC-CCeEEEEcCCC--Ccee--eecc-ccccCeEEEEECCCCCEEEEEcC-C---------CcEEEEeCCCCeeE
Q psy15995        244 RIITGSE-DNTIAVFEGPP--FKFK--MTKQ-EHSRFVQAVRYSPSGSHFASAGF-D---------GKVFLYDGASADLV  307 (683)
Q Consensus       244 ~l~~~~~-d~~i~iw~~~~--~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d---------g~i~iw~~~~~~~~  307 (683)
                      +++.|+. ...+.+||..+  .+..  ..+. .....-.++.+  +++.++.|+. +         ..+.+||..+.+..
T Consensus        22 iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~   99 (357)
T 2uvk_A           22 VYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWV   99 (357)
T ss_dssp             EEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEE
T ss_pred             EEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEE
Confidence            3455543 45688888753  3322  2222 11111222222  5666666765 2         46899999888765


Q ss_pred             EeccCC-ccccCeEEEEEccCCCEEEEEECC---------------------------------------CcEEEEECCC
Q psy15995        308 SELGNP-AHKGGVYAVAWKPDGTQLLTASGD---------------------------------------KTCKLWDIET  347 (683)
Q Consensus       308 ~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d---------------------------------------g~i~iwd~~~  347 (683)
                      ..-..+ .....-..+.  .+++.++.|+.+                                       ..+.+||+.+
T Consensus       100 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~  177 (357)
T 2uvk_A          100 KLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPST  177 (357)
T ss_dssp             ECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTT
T ss_pred             ECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCC
Confidence            543322 1111222222  467777777754                                       4688999988


Q ss_pred             CceeeEEEecCcceeceEEEEecCCEEEEEec------CCcEEEEecCCCCcceeeeee---ccccEEEEEEeCCCCEEE
Q psy15995        348 KSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSL------SGFISYLDVNNPSTPIRVIKG---HNKPITALALSPDRGTVF  418 (683)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~g~i~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~  418 (683)
                      .+....-...............++..++.|+.      ...+..||+......-..+..   ........+...+++.++
T Consensus       178 ~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv  257 (357)
T 2uvk_A          178 QQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIF  257 (357)
T ss_dssp             TEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEE
T ss_pred             CcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEE
Confidence            76544322222222212333346666666654      345677776221111111111   111111112223566777


Q ss_pred             EEeCC----------------------CcEEEEcCCCCCcceeccCC-CCcceeEEEEeCCeEEEEEcCC------eEEE
Q psy15995        419 TGSHD----------------------GFITRWNAKTGENDRVQGAG-HGNQINGMKATGELLYTCGIDD------TIKQ  469 (683)
Q Consensus       419 ~~~~d----------------------g~i~~w~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~------~i~~  469 (683)
                      .|+.+                      ..+.+||+.+.+........ ....-.++...+..++.|+.++      .+.+
T Consensus       258 ~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~  337 (357)
T 2uvk_A          258 AGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVL  337 (357)
T ss_dssp             ECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEE
T ss_pred             EcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEE
Confidence            77632                      25778998877654432211 1122233444577778888643      3445


Q ss_pred             EeCCCCc
Q psy15995        470 VDLSSNA  476 (683)
Q Consensus       470 ~~~~~~~  476 (683)
                      +++++++
T Consensus       338 l~~~~~~  344 (357)
T 2uvk_A          338 ITVKDNK  344 (357)
T ss_dssp             EEC-CCS
T ss_pred             EEEcCcE
Confidence            5666654

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=96.62  E-value=0.044  Score=50.53  Aligned_cols=192  Identities=10%  Similarity=-0.011  Sum_probs=99.4

Q ss_pred             CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEE----eCCeEEEE--EcCCeEEEEeCCCCcccCCceecCCCC
Q psy15995        415 GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKA----TGELLYTC--GIDDTIKQVDLSSNAYSGPEVKLGSQP  488 (683)
Q Consensus       415 ~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~--~~d~~i~~~~~~~~~~~~~~~~~~~~~  488 (683)
                      ..++.++.||.|.-+|..+++..-........++.....    .+..++..  ..||.+..++..++.... ..      
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~-~~------   83 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL-PL------   83 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE-EE------
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe-ee------
Confidence            467888899999999999888776654331122221110    12244444  578999888876542110 00      


Q ss_pred             ceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEE-----------ccCCCEEEEEcCCCcEEEEEcCCCccCc
Q psy15995        489 RGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISL-----------DHEHGLVAVGGADSKVHIYELNNKSLSP  557 (683)
Q Consensus       489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~~~dg~i~i~d~~~~~~~~  557 (683)
                                                  ..+......-+..           ...+..+++|+.+|.+...|+.+++.+.
T Consensus        84 ----------------------------~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W  135 (339)
T 2be1_A           84 ----------------------------SIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIIS  135 (339)
T ss_dssp             ----------------------------EHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEE
T ss_pred             ----------------------------ccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEE
Confidence                                        0000000000110           0145688899999999999999998876


Q ss_pred             ceeecCCcC------eeEEEEC-----CCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEE------EEEecCCC
Q psy15995        558 KAELDHLGP------VTDCSFS-----PSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVN------CVAWSPDS  620 (683)
Q Consensus       558 ~~~~~~~~~------v~~~~~s-----~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~------~~~~s~d~  620 (683)
                      ....+....      ..|....     ..+..++.+..+..+.+.+ .+++ .....+........      .-..+.|+
T Consensus       136 ~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg  213 (339)
T 2be1_A          136 AFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDG  213 (339)
T ss_dssp             EESTTCBCC--------------------CCEEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSS
T ss_pred             EEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCC
Confidence            655432111      0111110     1235677777777777766 4454 33222211100000      00112345


Q ss_pred             CeEEEeecCCcEEEEeCCCCceee
Q psy15995        621 ALVASGSLDTTIIIWSLASPAKHI  644 (683)
Q Consensus       621 ~~l~~~~~d~~v~iw~~~~~~~~~  644 (683)
                      .+ +.++.||.|.-+|..++..+.
T Consensus       214 ~~-~~~~~dg~v~A~d~~~G~~~W  236 (339)
T 2be1_A          214 MC-IAPFRDKSLLASDLDFRIARW  236 (339)
T ss_dssp             CC-EEEETTTEEEEECSTTCCEEE
T ss_pred             cE-EEECCCCEEEEEECCCCcEEE
Confidence            55 346778888888877777654

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=96.38  E-value=0.57  Score=42.72  Aligned_cols=212  Identities=8%  Similarity=0.097  Sum_probs=117.6

Q ss_pred             EEeecCCCeEEEEeeCC-------------CeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEc----CCCcEE
Q psy15995        235 CDFKPSRPFRIITGSED-------------NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAG----FDGKVF  297 (683)
Q Consensus       235 ~~~~~~~~~~l~~~~~d-------------~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~  297 (683)
                      --+++++.++..+...+             ..|+..++...+.......   .  ...++++++.|+-..    .+..|+
T Consensus        58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~---~--~~~~s~~g~~Iy~~~~~~~~~~~Iy  132 (302)
T 3s25_A           58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD---P--CIYASLIGNYIYYLHYDTQTATSLY  132 (302)
T ss_dssp             EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS---C--EEEEEEETTEEEEEEESSSSCEEEE
T ss_pred             eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC---C--ccEEEEeCCEEEEEeecCCCCceEE
Confidence            34577787644444433             4577777666543332221   1  236778888888665    344566


Q ss_pred             EEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC-CCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEE
Q psy15995        298 LYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG-DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLT  376 (683)
Q Consensus       298 iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  376 (683)
                      .-++..... ..+..  +.  +  .+++++++.|+-.+. ...|...++..+... .+. ....   .....|++.+++-
T Consensus       133 ~~~~dGs~~-~~lt~--~~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~-~l~-~~~~---~~~~~P~g~~iy~  200 (302)
T 3s25_A          133 RIRIDGEEK-KKIKN--HY--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA-LFY-DCNC---YKPVVLDDTNVYY  200 (302)
T ss_dssp             EEETTSCCC-EEEES--SC--C--CCSEEETTEEEEECTTTCCEEEEETTTTEEE-EEE-CSCE---EEEEEEETTEEEE
T ss_pred             EEECCCCCe-EEEeC--CC--c--eEeeEECCEEEEEeCCCceEEEEECCCCCEE-EEe-CCCc---cceeeecCCEEEE
Confidence            666654433 33321  21  2  456778888886665 567888888765533 222 2111   1234588988887


Q ss_pred             EecCC--cEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEe--CCCcEEEEcCCCCCcceeccCCCCcceeEEE
Q psy15995        377 VSLSG--FISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS--HDGFITRWNAKTGENDRVQGAGHGNQINGMK  452 (683)
Q Consensus       377 ~~~~g--~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~  452 (683)
                      ....+  .|..-++....  ...+.  ...+  ..++|++.+|+-+.  ..+.|..-++.......... .   .+..+.
T Consensus       201 t~~~~~~~I~~~~ldG~~--~~~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~-~---~~~~i~  270 (302)
T 3s25_A          201 MDVNRDNAIVHVNINNPN--PVVLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAK-G---EFCNIN  270 (302)
T ss_dssp             EEGGGTTEEEEECSSSCC--CEECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEE-S---CEEEEE
T ss_pred             EEcCCCcEEEEEECCCCC--eEEEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCCccEEeeC-C---ccceEE
Confidence            76553  45555555433  23332  2233  34788888888653  24567777776554433332 1   345666


Q ss_pred             EeCCeEEEEE-cCCeEEEEeCC
Q psy15995        453 ATGELLYTCG-IDDTIKQVDLS  473 (683)
Q Consensus       453 ~~~~~l~~~~-~d~~i~~~~~~  473 (683)
                      ..+++++-.. ..+.|...++.
T Consensus       271 i~~d~Iy~td~~~~~i~~~~~d  292 (302)
T 3s25_A          271 VTSQYVYFTDFVSNKEYCTSTQ  292 (302)
T ss_dssp             ECSSEEEEEETTTCCEEEEESS
T ss_pred             EeCCEEEEEECCCCeEEEEECC
Confidence            6777776655 33445544443

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=96.33  E-value=0.89  Score=44.42  Aligned_cols=309  Identities=11%  Similarity=0.038  Sum_probs=153.6

Q ss_pred             EEEecCCCCEEEEeCCCcccccccccccCCCCc-ccc-----e-----eeeeecceeeeEee-----ccceEEEeecC-C
Q psy15995        100 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPI-KDI-----G-----TLLSLTSIRNILVL-----SIGFYIASGDI-S  162 (683)
Q Consensus       100 las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~-----~-----~~~~~~~i~~~~~s-----~~~~~l~~~~~-d  162 (683)
                      +.||+..|+|+|+-+.+++.+..+..-...... ...     .     ............+|     -||+||..-.. .
T Consensus        73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan  152 (638)
T 3sbq_A           73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN  152 (638)
T ss_dssp             EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence            468899999999999999988877533211100 000     0     00111222222333     36888888764 4


Q ss_pred             ccEEEEeccccceeeeccccccCCCeeEEEEc--CCCCeEEEEecCCceEEEEEEccCCCcee--------e---eecCC
Q psy15995        163 GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWS--PDNQRMVVVGEGRERFGHVFMSETGTSVG--------E---ISGQS  229 (683)
Q Consensus       163 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~  229 (683)
                      ..|...++...++-....++ ....+..++|-  |+..|+++.+....     =..+.|..+.        .   +.+..
T Consensus       153 ~RvAri~l~~~~~d~Ii~iP-n~~~~Hg~~~~~~p~T~yv~~~~e~~~-----P~pndg~~~~~~~~~~y~~f~~iD~~t  226 (638)
T 3sbq_A          153 SRVARIRLDIMKCDKMITVP-NVQAIHGLRLQKVPHTKYVFANAEFII-----PHPNDGKVFDLQDENSYTMYNAIDAET  226 (638)
T ss_dssp             TEEEEEETTTTEEEEEEECT-TCSCEEEEEECCSSBCCEEEEEECSCE-----ESSCSSSCCCTTSTTEEEEEEEEETTT
T ss_pred             cceEEEECCcEeeceeEeCC-CCcCcccccccccCCccEEEecceeec-----cCCCCCcccccCChhhceEEEEEcCCc
Confidence            56888888876654433333 34778888886  78888888776531     1122222110        0   00000


Q ss_pred             cCe-EEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc--cccCeEEEEEC--------CCCCEEEEEcCCC-cEE
Q psy15995        230 KPI-NSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE--HSRFVQAVRYS--------PSGSHFASAGFDG-KVF  297 (683)
Q Consensus       230 ~~v-~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~--------~~~~~l~~~~~dg-~i~  297 (683)
                      -.| +.+..  +++.-.+-.+.+|.-.++...+.+.-..+.+  ....=..+.|+        .+|++-.   .+| .+.
T Consensus       227 m~v~~Qv~v--~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~---~~g~gv~  301 (638)
T 3sbq_A          227 MEMAFQVIV--DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFIT---LGDSKTP  301 (638)
T ss_dssp             CSEEEEEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBC---CTTCCCC
T ss_pred             cEEEEEEEc--CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEE---ECCCCee
Confidence            001 01111  1111112222223222222111111111100  00111111111        1222111   011 356


Q ss_pred             EEeCCC----Ce-eEEeccCCccccCeEEEEEccCCCEEEEEEC-CCcEEEEECCCCce-----------eeEEEecCcc
Q psy15995        298 LYDGAS----AD-LVSELGNPAHKGGVYAVAWKPDGTQLLTASG-DKTCKLWDIETKSV-----------VSEFIMGNQV  360 (683)
Q Consensus       298 iw~~~~----~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~-----------~~~~~~~~~~  360 (683)
                      +.|.+.    +. ....+.   .......+..+|||+++++++. +.++.++|++....           ...-...-..
T Consensus       302 ViD~~~~~~~~~~~~~~iP---~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl  378 (638)
T 3sbq_A          302 VLDGRKKDGKDSKFTRYVP---VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL  378 (638)
T ss_dssp             EEECSCBTTBCCSSEEEEE---ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred             EEccccccccCCceEEEEe---CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence            666554    21 222222   3445678899999999988765 77899999874211           1111223345


Q ss_pred             eeceEEEEecCCEEEEEecCCcEEEEecCCC---------CcceeeeeeccccEEEEE-----EeCCCCEEEEEeC
Q psy15995        361 EDQQVSCLWQGDYLLTVSLSGFISYLDVNNP---------STPIRVIKGHNKPITALA-----LSPDRGTVFTGSH  422 (683)
Q Consensus       361 ~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~---------~~~~~~~~~~~~~v~~~~-----~~~~~~~l~~~~~  422 (683)
                      ......+.++|....+...+..+.-|++...         ...+..+.-|..+-.-.+     -.|+|++|++...
T Consensus       379 GPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK  454 (638)
T 3sbq_A          379 GPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK  454 (638)
T ss_dssp             CEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred             cccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence            5667777778866666778999999998642         123333444443322221     2568899988753

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=96.20  E-value=0.022  Score=52.58  Aligned_cols=192  Identities=6%  Similarity=-0.045  Sum_probs=108.0

Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeecccc-ccCeEEEEE--CCCCCEEEEE--cCCCcEEEEeCCCCeeEEeccCCc--cc
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTKQEH-SRFVQAVRY--SPSGSHFASA--GFDGKVFLYDGASADLVSELGNPA--HK  316 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~~~v~~~~~--~~~~~~l~~~--~~dg~i~iw~~~~~~~~~~~~~~~--~~  316 (683)
                      +++.++.||.|.-+|..+|+.+..+... ..++....-  .+.+..++.+  +.||.+..++..+|.....+..+.  ..
T Consensus        12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~   91 (339)
T 2be1_A           12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST   91 (339)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred             EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence            5899999999999999999988887654 122222110  0112234444  579999999998886655443211  11


Q ss_pred             cCeEE---EEE-----ccCCCEEEEEECCCcEEEEECCCCceeeEEEecCccee----ce--EEEE-----ecCCEEEEE
Q psy15995        317 GGVYA---VAW-----KPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVED----QQ--VSCL-----WQGDYLLTV  377 (683)
Q Consensus       317 ~~i~~---~~~-----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~----~~--~~~~-----~~~~~l~~~  377 (683)
                      .++..   ...     ...+..+++++.+|.+...|+.+|+.+.++........    ..  ....     ..+..++.+
T Consensus        92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig  171 (339)
T 2be1_A           92 SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIG  171 (339)
T ss_dssp             CSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEE
T ss_pred             cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEe
Confidence            12221   000     01456789999999999999999999988865432110    00  0000     124567777


Q ss_pred             ecCCcEEEEecCCCCccee-eeeecccc-EE-----EEEEeCCCCEEEEEeCCCcEEEEcCCCCCcce
Q psy15995        378 SLSGFISYLDVNNPSTPIR-VIKGHNKP-IT-----ALALSPDRGTVFTGSHDGFITRWNAKTGENDR  438 (683)
Q Consensus       378 ~~~g~i~~~~~~~~~~~~~-~~~~~~~~-v~-----~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~  438 (683)
                      ..+..+.+.+ +++ ..-. .+...... +.     .-..+.|+.+ +.++.||.|.-+|..++...-
T Consensus       172 ~~~y~v~~~~-~sG-~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W  236 (339)
T 2be1_A          172 KTIFELGIHS-YDG-ASYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW  236 (339)
T ss_dssp             EEEEECEECC-TTS-CCCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred             cceEEEEEEC-CCC-CeEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence            7776666666 222 1110 00000000 00     0000123555 457889999999988877654

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=96.05  E-value=1.2  Score=43.41  Aligned_cols=108  Identities=9%  Similarity=0.062  Sum_probs=61.6

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccceeeecccc------ccCCCeeEEEEcCC---CCeEEEEecC------
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFH------PIGGPIKDIAWSPD---NQRMVVVGEG------  206 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~i~~~~~s~~---~~~l~~~~~~------  206 (683)
                      .....++|.|+|+++++-...+.|++++..+++......+.      ...+....|+|+||   +..|.++...      
T Consensus        27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~  106 (454)
T 1cru_A           27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST  106 (454)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred             CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence            45678999999998777655557888876555432211111      12456779999996   6666665532      


Q ss_pred             -C----ceEEEEEEccCC-------Ccee-eee-cCCcCeEEEEeecCCCeEEEEee
Q psy15995        207 -R----ERFGHVFMSETG-------TSVG-EIS-GQSKPINSCDFKPSRPFRIITGS  249 (683)
Q Consensus       207 -~----~~~~~~~~~~~~-------~~~~-~~~-~~~~~v~~~~~~~~~~~~l~~~~  249 (683)
                       .    ...+.-+..+.+       +.+. .+. ........++|.|++...+.+|.
T Consensus       107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence             0    111222222221       1111 122 12235789999999986454443

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=96.02  E-value=0.87  Score=41.48  Aligned_cols=248  Identities=8%  Similarity=-0.022  Sum_probs=127.1

Q ss_pred             EeeccceEEEeec--CCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCC------------ceEEEE
Q psy15995        148 LVLSIGFYIASGD--ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR------------ERFGHV  213 (683)
Q Consensus       148 ~~s~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~------------~~~~~~  213 (683)
                      .|+++|.+|....  .++.|...+...... .+..-    .  .+--+++++.+++.+....            ...++.
T Consensus        20 ~~~~~g~~iy~~n~~d~~~ly~~~~dg~~~-~~l~~----~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~   92 (302)
T 3s25_A           20 LFCESDGEVFFSNTNDNGRLYAMNIDGSNI-HKLSN----D--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCR   92 (302)
T ss_dssp             CEEEETTEEEEEEGGGTTEEEEEETTSCSC-EEEEE----E--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEE
T ss_pred             EEEEeCCEEEEEeCCCCceEEEEcCCCCCC-EEccC----C--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEE
Confidence            3556777666553  345566666544332 11111    1  2345688999999987653            222333


Q ss_pred             EEccCCCceeeeecCCcCeEEEEeecCCCeEEEEe---eCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEE
Q psy15995        214 FMSETGTSVGEISGQSKPINSCDFKPSRPFRIITG---SEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASA  290 (683)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~---~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  290 (683)
                      ...+.++ ...+....    ...|+++++.+..+-   ..+..|...++.... ...+..+..    .+++++++.|+-.
T Consensus        93 i~~dg~~-~~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t  162 (302)
T 3s25_A           93 IKRNGHG-STVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYN  162 (302)
T ss_dssp             EETTSCC-CEEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEE
T ss_pred             EeCCCCc-ceEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEE
Confidence            3333333 22222221    236788888644443   234455556655433 333333322    4568888888766


Q ss_pred             cC-CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCC--cEEEEECCCCceeeEEEecCcceeceEEE
Q psy15995        291 GF-DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDK--TCKLWDIETKSVVSEFIMGNQVEDQQVSC  367 (683)
Q Consensus       291 ~~-dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  367 (683)
                      +. ...|..-++..+.....+.     +... ..+.|++++|+-....+  .|..-++..... ..+ ....    ...+
T Consensus       163 ~~g~~~Iy~~~l~g~~~~~l~~-----~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~L-t~~~----~~~~  230 (302)
T 3s25_A          163 NPKNGQLYRYDTASQSEALFYD-----CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVL-TEAN----IEHY  230 (302)
T ss_dssp             CTTTCCEEEEETTTTEEEEEEC-----SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EEC-SCSC----EEEE
T ss_pred             eCCCceEEEEECCCCCEEEEeC-----CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEE-eCCC----cceE
Confidence            54 5788888887765543332     1222 23568888888766543  455555554432 222 1111    1347


Q ss_pred             EecCCEEEEEec--CCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEe-CCCcEEEEc
Q psy15995        368 LWQGDYLLTVSL--SGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS-HDGFITRWN  430 (683)
Q Consensus       368 ~~~~~~l~~~~~--~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~w~  430 (683)
                      .+.++.|+....  .+.|...++....  .+.+...  .+.  .+++.+.+++-.. ..+.|..-+
T Consensus       231 ~~~g~~Iy~~~~~~~~~i~~~~~DG~~--r~~l~~~--~~~--~i~i~~d~Iy~td~~~~~i~~~~  290 (302)
T 3s25_A          231 NVYGSLIFYQRGGDNPALCVVKNDGTG--FKELAKG--EFC--NINVTSQYVYFTDFVSNKEYCTS  290 (302)
T ss_dssp             EEETTEEEEEECSSSCEEEEEETTSCC--CEEEEES--CEE--EEEECSSEEEEEETTTCCEEEEE
T ss_pred             EECCCEEEEEECCCCcEEEEEECCCCc--cEEeeCC--ccc--eEEEeCCEEEEEECCCCeEEEEE
Confidence            778888876643  3455555555422  2222211  233  3444556666443 234444333

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=95.33  E-value=0.66  Score=48.38  Aligned_cols=118  Identities=10%  Similarity=0.160  Sum_probs=66.7

Q ss_pred             EEEEccCCCEEEEEcCCC--cEEEEEcCCCccCccee---ec-CCcCeeEEEECCC-CCEEEEEeC--C-----CeEEEE
Q psy15995        526 SISLDHEHGLVAVGGADS--KVHIYELNNKSLSPKAE---LD-HLGPVTDCSFSPS-NEYLVASDA--H-----RKVVLY  591 (683)
Q Consensus       526 ~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~---~~-~~~~v~~~~~s~~-~~~l~~~~~--d-----~~i~i~  591 (683)
                      +.+.-.++++++.|+.++  .+.+||..+........   .. ....-.++.+..+ ++.++.|+.  +     ..+.+|
T Consensus       494 ~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~y  573 (695)
T 2zwa_A          494 SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIF  573 (695)
T ss_dssp             EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEE
T ss_pred             eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEE
Confidence            344435788888887654  69999998876543221   11 1122234555554 667777765  2     468899


Q ss_pred             ECCCCcc------ccccceeeecccEEEEEecCCCCeEEEeecC--------CcEEEEeCCCCcee
Q psy15995        592 RVPDFEL------AHNKEWGFHSAKVNCVAWSPDSALVASGSLD--------TTIIIWSLASPAKH  643 (683)
Q Consensus       592 ~~~~~~~------~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d--------~~v~iw~~~~~~~~  643 (683)
                      |+.+.+.      ............-.+++...++++++.|+.+        ..+.+||+.+.+-.
T Consensus       574 d~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~  639 (695)
T 2zwa_A          574 KYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT  639 (695)
T ss_dssp             EECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred             EccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence            9988762      1110000000011122233347788888753        45999999887654

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=95.08  E-value=2.7  Score=40.92  Aligned_cols=52  Identities=15%  Similarity=0.075  Sum_probs=36.1

Q ss_pred             CCeEEEeeCCCCC--eEEEecCCeEEEEeCCCCc---cccc----cc-C----cccceEEEEECCC
Q psy15995         45 GQPIVLGGDPKGK--NFLYTNGNSVIIRNIENPA---ISDI----YT-E----HSCAVNVAKYSPS   96 (683)
Q Consensus        45 ~~~~~~~~s~~~~--~l~~~~~~~i~v~~~~~~~---~~~~----~~-~----h~~~v~~~~~s~d   96 (683)
                      ..+..|+|.|||.  ++++...|.|++++.....   .+..    +. +    .......|+|+|+
T Consensus        14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~   79 (463)
T 2wg3_C           14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN   79 (463)
T ss_dssp             SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred             CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence            4678999999995  8888888999999754321   1111    11 1    2456889999996

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=94.91  E-value=1.7  Score=45.22  Aligned_cols=155  Identities=14%  Similarity=0.206  Sum_probs=84.3

Q ss_pred             EEEEcc-CCCEEEEEcCC------CcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCC--eEEEEECCCC
Q psy15995        526 SISLDH-EHGLVAVGGAD------SKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHR--KVVLYRVPDF  596 (683)
Q Consensus       526 ~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--~i~i~~~~~~  596 (683)
                      +++..+ ++++++.|+.+      ..+.+||..+..............-.+++.-.+++.++.|+.++  .+.+||..+.
T Consensus       444 s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~  523 (695)
T 2zwa_A          444 TFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE  523 (695)
T ss_dssp             EEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT
T ss_pred             EEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCC
Confidence            334443 77788888754      35889998886544332222111112333334788888887654  6999999886


Q ss_pred             ccccccc---eeeecccEEEEEecCC-CCeEEEeec--C-----CcEEEEeCCCCce------eeEeec-CCCCCCeeEE
Q psy15995        597 ELAHNKE---WGFHSAKVNCVAWSPD-SALVASGSL--D-----TTIIIWSLASPAK------HIIIKN-AHPQSQITRL  658 (683)
Q Consensus       597 ~~~~~~~---~~~h~~~v~~~~~s~d-~~~l~~~~~--d-----~~v~iw~~~~~~~------~~~~~~-~~~~~~v~~l  658 (683)
                      +......   .......-.++.+..+ +++++.|+.  +     ..+.+||+.+...      ...... ......- ++
T Consensus       524 ~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~  602 (695)
T 2zwa_A          524 IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QI  602 (695)
T ss_dssp             EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EE
T ss_pred             ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eE
Confidence            6543221   0001111233455554 677788776  2     3588999988772      211110 0111122 33


Q ss_pred             EEcc-CCeEEEeeCC--------CcEEEEeec
Q psy15995        659 QWLD-NDLLVSVGQD--------CNTKIWEIA  681 (683)
Q Consensus       659 ~~~~-~~~l~s~~~d--------~~v~vw~~~  681 (683)
                      +..+ +.+++.||.+        ..+.+||++
T Consensus       603 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~  634 (695)
T 2zwa_A          603 KYITPRKLLIVGGTSPSGLFDRTNSIISLDPL  634 (695)
T ss_dssp             EEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred             EEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence            3344 7788888753        347777764

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=94.39  E-value=2.7  Score=37.75  Aligned_cols=220  Identities=10%  Similarity=-0.024  Sum_probs=121.4

Q ss_pred             CCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCce---eeeecC
Q psy15995        444 HGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAK---VSSLPI  520 (683)
Q Consensus       444 ~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  520 (683)
                      ....|..++......+... |+.+..|-...................+.....+........+..+.....   -.....
T Consensus        22 ~~~~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l~~G~v~~wG~n~~Gqlg~P~~~  100 (282)
T 3qhy_B           22 AQSGVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALKDGEVIAWGGNEDGQTTVPAEA  100 (282)
T ss_dssp             GSSSCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEEETTEEEEEECCTTSTTCCCGGG
T ss_pred             ccCCCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEEECCEEEEeeCCCCCCCCCCccc
Confidence            3346778877766655556 999999987765544433333334555555555554445555655543211   111122


Q ss_pred             CCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCcccc
Q psy15995        521 DYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAH  600 (683)
Q Consensus       521 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~  600 (683)
                      ...+..++...+.  .+.-. ||.|+.|-......... .......|..++...+.  .++-. ||.+..|-......+.
T Consensus       101 ~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~-~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gqlg  173 (282)
T 3qhy_B          101 RSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTV-PAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQTT  173 (282)
T ss_dssp             SSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSC-CGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTTSTTS
T ss_pred             CCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCC-CccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCCCCCC
Confidence            3345555555443  33334 89999997655332211 11234567777765443  23333 7999999876532221


Q ss_pred             ccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEccCCeEEEeeCCCcEEEEee
Q psy15995        601 NKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       601 ~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~v~vw~~  680 (683)
                      ....  -...|..++...+- .++.  .||.|+.|-......+.....  ....|..++--....++..  ||.|..|=-
T Consensus       174 ~p~~--~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~--~~~~v~~i~~G~~h~~al~--~g~v~~wG~  244 (282)
T 3qhy_B          174 VPAE--AQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPTE--ALSGVSAIASGEWYSLALK--NGKVIAWGS  244 (282)
T ss_dssp             CCGG--GGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCGG--GGSSCCEEEECSSCEEEEE--TTEEEEEST
T ss_pred             Ccee--cCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCcc--cCCCceEEEcCCCEEEEEE--CCEEEEecC
Confidence            1111  23567777765432 2333  699999998765443322211  1346777775555555444  899988843

>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}

Probab=90.42  E-value=18  Score=37.49  Aligned_cols=251  Identities=10%  Similarity=0.022  Sum_probs=120.0

Q ss_pred             cceEEEE-ECCCCcEEEE-ecCC----CCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEee
Q psy15995         86 CAVNVAK-YSPSGFYIAS-GDIS----GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASG  159 (683)
Q Consensus        86 ~~v~~~~-~s~d~~~las-~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  159 (683)
                      -....+. ++||+++++. -|..    ..++++|+.+++.+..--. +...    .+.+ .......++|..+...+++.
T Consensus       129 ~~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k----~~~~-~~~~~~~~~W~d~~~~~~~~  202 (711)
T 4hvt_A          129 VAYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITN----SGKL-LEGKFTYPTWINKDTIIFNL  202 (711)
T ss_dssp             EEEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCT----TCCB-CCEETCCEEEEETTEEEECC
T ss_pred             EEEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccc----cccc-cccccceeeEECCCEEEEEe
Confidence            3556666 8999988764 2333    3599999999977632101 1000    0000 00012233565444444431


Q ss_pred             ----------cCCccEEEEeccccceeeeccccccCCC-eeEEEEcCCCCe----EEEEec-CCc-eEEEEEEccCC-Cc
Q psy15995        160 ----------DISGKVRIWDTVNKEHILKNEFHPIGGP-IKDIAWSPDNQR----MVVVGE-GRE-RFGHVFMSETG-TS  221 (683)
Q Consensus       160 ----------~~d~~i~iwd~~~~~~~~~~~~~~~~~~-i~~~~~s~~~~~----l~~~~~-~~~-~~~~~~~~~~~-~~  221 (683)
                                +....|+.|.+-+...--...+...... -.+...++++++    +++... +.. ....+.+.+.. ..
T Consensus       203 ~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  282 (711)
T 4hvt_A          203 VLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK  282 (711)
T ss_dssp             CCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE
T ss_pred             CCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc
Confidence                      1235688888765432222222222222 334556777764    333222 221 22233333221 12


Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEe---------eCCCeEEEEcCCCCc--------eeeec-cccccCeEEEEECCC
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITG---------SEDNTIAVFEGPPFK--------FKMTK-QEHSRFVQAVRYSPS  283 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~---------~~d~~i~iw~~~~~~--------~~~~~-~~~~~~v~~~~~~~~  283 (683)
                      ...+.....  ..+..+.++..++.+.         ...+.|...++....        ....+ ......+..+.+..+
T Consensus       283 ~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  360 (711)
T 4hvt_A          283 LQKINMPSD--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD  360 (711)
T ss_dssp             EEECCSCTT--CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS
T ss_pred             ceEeecCCc--ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC
Confidence            222222211  1123344554322221         246778888876531        11112 223446778888876


Q ss_pred             CCEEEEEcCCC--cEEEEeCCCCe-eEEe-ccCCccccCeEEEEEccCCCEE-EEEEC---CCcEEEEECC
Q psy15995        284 GSHFASAGFDG--KVFLYDGASAD-LVSE-LGNPAHKGGVYAVAWKPDGTQL-LTASG---DKTCKLWDIE  346 (683)
Q Consensus       284 ~~~l~~~~~dg--~i~iw~~~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~l-~~~~~---dg~i~iwd~~  346 (683)
                       ..+++...++  .+.++++.+++ .... +..+ ..+.+......+++..+ ++.+.   -+.+..+|+.
T Consensus       361 -~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp-~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~  429 (711)
T 4hvt_A          361 -RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLP-YQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT  429 (711)
T ss_dssp             -CEEEEEEETTEEEEEEECEETTEECCCEEECCC-STTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred             -EEEEEEEECCEEEEEEEECCCCceEEEeccCCC-CCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence             4666776676  46777776664 2233 3332 13456666666766544 44333   3557777776

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=89.50  E-value=20  Score=36.72  Aligned_cols=37  Identities=14%  Similarity=0.290  Sum_probs=30.8

Q ss_pred             ceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccc
Q psy15995         87 AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        87 ~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      .|.++.+  +.++|++-+.|.++|+|++.+++++.....
T Consensus       223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL  259 (729)
T 3f7f_A          223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM  259 (729)
T ss_dssp             EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred             eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence            4666654  467999999999999999999998877766

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=88.44  E-value=17  Score=34.47  Aligned_cols=186  Identities=13%  Similarity=0.065  Sum_probs=88.1

Q ss_pred             EEEeecCCccEEEEeccc-cceeeeccccccCCCeeEEEEcC-CCCeEEEEecCCceEEEEEEc-cCCCceeeeec----
Q psy15995        155 YIASGDISGKVRIWDTVN-KEHILKNEFHPIGGPIKDIAWSP-DNQRMVVVGEGRERFGHVFMS-ETGTSVGEISG----  227 (683)
Q Consensus       155 ~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~----  227 (683)
                      .|.++...| +.+++... ++.-...........|.+|++.| +...+.++......-..++.. +.++.-..+..    
T Consensus        24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~  102 (394)
T 3b7f_A           24 MLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAF  102 (394)
T ss_dssp             EEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCC
T ss_pred             EEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccC
Confidence            555666666 44554432 22111111112236799999998 334444444331000123333 33433222211    


Q ss_pred             ----------CCcCeEEEEeecCC-CeEEEEeeCCCeEEEEcCC--CCceeeecc----------------ccccCeEEE
Q psy15995        228 ----------QSKPINSCDFKPSR-PFRIITGSEDNTIAVFEGP--PFKFKMTKQ----------------EHSRFVQAV  278 (683)
Q Consensus       228 ----------~~~~v~~~~~~~~~-~~~l~~~~~d~~i~iw~~~--~~~~~~~~~----------------~~~~~v~~~  278 (683)
                                ....|.++++.|.+ +..+..+...+.|...+-.  +.+.+....                .....+.++
T Consensus       103 ~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i  182 (394)
T 3b7f_A          103 NKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSI  182 (394)
T ss_dssp             CCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEE
T ss_pred             CCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEE
Confidence                      11257788898732 2246666666766665422  222221111                112357899


Q ss_pred             EECCC-CCEEEEEcCCCcEEEEeCCCCeeEEeccC--Cc-c--------ccCeEEEEEccC-CCEEEEEECCCcEEEE
Q psy15995        279 RYSPS-GSHFASAGFDGKVFLYDGASADLVSELGN--PA-H--------KGGVYAVAWKPD-GTQLLTASGDKTCKLW  343 (683)
Q Consensus       279 ~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~-~--------~~~i~~~~~~~~-~~~l~~~~~dg~i~iw  343 (683)
                      .+.|. ...+..+..++.|...+ ..++.-..+..  .. +        ...+.++++.|+ ...++++...+ |...
T Consensus       183 ~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s  258 (394)
T 3b7f_A          183 LVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRM  258 (394)
T ss_dssp             EECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEE
T ss_pred             EECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEe
Confidence            99984 34455555455555443 22322222211  00 0        135889999985 45677776554 4433

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=87.56  E-value=4.7  Score=43.68  Aligned_cols=41  Identities=7%  Similarity=0.052  Sum_probs=35.2

Q ss_pred             cceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccc
Q psy15995         86 CAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFH  126 (683)
Q Consensus        86 ~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~  126 (683)
                      ..|.+++..++..++++-+.|+++|+|++.+++++......
T Consensus       236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~  276 (950)
T 4gq2_M          236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS  276 (950)
T ss_dssp             TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred             ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeeccc
Confidence            35778888889999999999999999999999988776543

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=87.41  E-value=17  Score=33.27  Aligned_cols=141  Identities=5%  Similarity=-0.006  Sum_probs=72.4

Q ss_pred             CCCEEEEEcCCCcEEEEEcC--CCccCcc-------eeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCcccc--
Q psy15995        532 EHGLVAVGGADSKVHIYELN--NKSLSPK-------AELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAH--  600 (683)
Q Consensus       532 ~~~~l~~~~~dg~i~i~d~~--~~~~~~~-------~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~--  600 (683)
                      ....|+..+..|.+..+...  .-....+       ..+.....|.++...+++.+|+..+..|.++.-.+.......  
T Consensus       156 ~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~  235 (327)
T 3uc1_A          156 AGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRG  235 (327)
T ss_dssp             TTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred             CCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcC
Confidence            34456666777887777766  2211111       122345667777776777789999999999988876433221  


Q ss_pred             -----ccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCcee-------eEeecCCCCCCeeEEEEc--cCCeE
Q psy15995        601 -----NKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKH-------IIIKNAHPQSQITRLQWL--DNDLL  666 (683)
Q Consensus       601 -----~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~-------~~~~~~~~~~~v~~l~~~--~~~~l  666 (683)
                           ...+..-.+.+..+....+...++..+.+|.+.-++...-...       ..+... ..+.|.++...  ++..+
T Consensus       236 ~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~-~~d~vv~~~~~~~~~~~~  314 (327)
T 3uc1_A          236 GKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLG-EGDTLLAIARNAEESGDD  314 (327)
T ss_dssp             SCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGGSCBCCTTSCCEECTTCC-TTCCEEEEEECC------
T ss_pred             CCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhhccccCCCCCCeEeEecC-CCCEEEEEEEcCCCcceE
Confidence                 1111101234444444444556667777887777765432211       111111 24677777766  34456


Q ss_pred             EEeeCCC
Q psy15995        667 VSVGQDC  673 (683)
Q Consensus       667 ~s~~~d~  673 (683)
                      ++.+.+|
T Consensus       315 ~~~~~~g  321 (327)
T 3uc1_A          315 NAVDANG  321 (327)
T ss_dssp             -------
T ss_pred             EEEecCC
Confidence            6666555

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=86.96  E-value=18  Score=33.10  Aligned_cols=103  Identities=12%  Similarity=0.032  Sum_probs=56.5

Q ss_pred             EEEEeeCCCeEEEEcCCCCc---------eeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEe---CCC------Ce
Q psy15995        244 RIITGSEDNTIAVFEGPPFK---------FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD---GAS------AD  305 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~---~~~------~~  305 (683)
                      .+++.+.+|.|+--.+.+.+         .-..++ ..+.+..+........|+.-+..|.++-..   +..      |.
T Consensus         5 v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~   83 (327)
T 3uc1_A            5 VVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ   83 (327)
T ss_dssp             EEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred             EEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence            57888888988876532211         111122 234555555555555666666678766553   322      22


Q ss_pred             eEEeccCCccccCeEEEEEcc---CCCEEEEEECCCcEEEEECCC
Q psy15995        306 LVSELGNPAHKGGVYAVAWKP---DGTQLLTASGDKTCKLWDIET  347 (683)
Q Consensus       306 ~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iwd~~~  347 (683)
                      .+..+-.......|.++...+   +...++..+.+|.++.-.+..
T Consensus        84 ~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~  128 (327)
T 3uc1_A           84 HVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTD  128 (327)
T ss_dssp             EHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGG
T ss_pred             EHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHH
Confidence            222221112345566554433   467788888888888777654

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=86.14  E-value=26  Score=34.07  Aligned_cols=55  Identities=15%  Similarity=0.075  Sum_probs=35.5

Q ss_pred             cceeeeEeeccce-EEEeecCCccEEEEeccccc---eeeecc--cc-----ccCCCeeEEEEcCC
Q psy15995        142 TSIRNILVLSIGF-YIASGDISGKVRIWDTVNKE---HILKNE--FH-----PIGGPIKDIAWSPD  196 (683)
Q Consensus       142 ~~i~~~~~s~~~~-~l~~~~~d~~i~iwd~~~~~---~~~~~~--~~-----~~~~~i~~~~~s~~  196 (683)
                      .....|+|.|||. .|+++...|.|++++.....   .+....  +.     ..++....|+|+|+
T Consensus        14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~   79 (463)
T 2wg3_C           14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN   79 (463)
T ss_dssp             SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred             CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence            5677899999996 55556678999999754321   111111  11     11456889999997

>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}

Probab=85.79  E-value=36  Score=35.35  Aligned_cols=233  Identities=9%  Similarity=-0.001  Sum_probs=110.8

Q ss_pred             eCCCCCeEEEe--cCC----eEEEEeCCCCccccc-ccC-ccc------ceEEEEECCCCcEEEEec----------CCC
Q psy15995         52 GDPKGKNFLYT--NGN----SVIIRNIENPAISDI-YTE-HSC------AVNVAKYSPSGFYIASGD----------ISG  107 (683)
Q Consensus        52 ~s~~~~~l~~~--~~~----~i~v~~~~~~~~~~~-~~~-h~~------~v~~~~~s~d~~~las~~----------~dg  107 (683)
                      ++||+++++++  .+|    .++++|+++++.+.- |.. -+.      ....++|..+..++++..          ...
T Consensus       137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~  216 (711)
T 4hvt_A          137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPN  216 (711)
T ss_dssp             CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBC
T ss_pred             cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCC
Confidence            89999999987  232    799999999987642 220 000      113346654444444321          123


Q ss_pred             CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE-----EEeec---CCccEEEEeccc--cceee
Q psy15995        108 KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY-----IASGD---ISGKVRIWDTVN--KEHIL  177 (683)
Q Consensus       108 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-----l~~~~---~d~~i~iwd~~~--~~~~~  177 (683)
                      +|+.|.+.+...--..-+.....           ........++++++     +++.+   ....+.+.+...  ++ +.
T Consensus       217 ~v~~~~~Gt~~~~~~~v~~~~~~-----------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~  284 (711)
T 4hvt_A          217 SLYIWKRGESIEKAKKLFEVPKE-----------YIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQ  284 (711)
T ss_dssp             EEEEEETTSCGGGCEEEEECCTT-----------SCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EE
T ss_pred             EEEEEECCCChHHCeEEeccCCC-----------ceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ce
Confidence            48888776553221111111000           01122334455552     33322   224456666553  22 11


Q ss_pred             eccccccCCCeeEEEEcCCCCeEEEEecC--------CceEEEEEEccCC-------Cceeeee--cCCcCeEEEEeecC
Q psy15995        178 KNEFHPIGGPIKDIAWSPDNQRMVVVGEG--------RERFGHVFMSETG-------TSVGEIS--GQSKPINSCDFKPS  240 (683)
Q Consensus       178 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~~--------~~~~~~~~~~~~~-------~~~~~~~--~~~~~v~~~~~~~~  240 (683)
                      ....+. .   ..+..+.++.+++....+        ....+...+.+.+       .....+-  .....+..+.+..+
T Consensus       285 ~l~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  360 (711)
T 4hvt_A          285 KINMPS-D---ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD  360 (711)
T ss_dssp             ECCSCT-T---CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS
T ss_pred             EeecCC-c---ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC
Confidence            222221 1   122344455544433221        1122445555543       1222222  23345667777766


Q ss_pred             CCeEEEEeeCCCe--EEEEcCCCCc-eeee-ccc-cccCeEEEEECCCCC-EEEEEcC---CCcEEEEeCC
Q psy15995        241 RPFRIITGSEDNT--IAVFEGPPFK-FKMT-KQE-HSRFVQAVRYSPSGS-HFASAGF---DGKVFLYDGA  302 (683)
Q Consensus       241 ~~~~l~~~~~d~~--i~iw~~~~~~-~~~~-~~~-~~~~v~~~~~~~~~~-~l~~~~~---dg~i~iw~~~  302 (683)
                      .  ++++...++.  +.+++..+++ .... +.- ....+......+++. ++++.+.   -+.+..+|..
T Consensus       361 ~--l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~  429 (711)
T 4hvt_A          361 R--VFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT  429 (711)
T ss_dssp             C--EEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred             E--EEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence            3  5777777765  5667765554 1222 211 124566666677765 3333332   3567888876

>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}

Probab=85.34  E-value=20  Score=31.93  Aligned_cols=197  Identities=13%  Similarity=0.066  Sum_probs=109.2

Q ss_pred             CeEEEEeecCCCeEEEEeeCCCeEEEE---cCCCCceeeeccccccCeEEEEECC--CCCEEEEEcCCCcEEEEeCCCCe
Q psy15995        231 PINSCDFKPSRPFRIITGSEDNTIAVF---EGPPFKFKMTKQEHSRFVQAVRYSP--SGSHFASAGFDGKVFLYDGASAD  305 (683)
Q Consensus       231 ~v~~~~~~~~~~~~l~~~~~d~~i~iw---~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iw~~~~~~  305 (683)
                      .+..+.......+ ++..+.+|.++--   +++.......+. ....|..+.. +  +...++..+.+|.++...+..-.
T Consensus        25 ~~~~~~~~~t~~~-ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~  101 (276)
T 3no0_A           25 PVVNILRVPFTEG-LFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFE  101 (276)
T ss_dssp             CEEEEEEEETTSC-EEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred             eEEEEEEECCCCE-EEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence            3444433333333 5566666766543   333222111132 3456666654 4  46789999999999998765432


Q ss_pred             ----eEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCce-------eeEEEecCcceeceEEEEecCCEE
Q psy15995        306 ----LVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSV-------VSEFIMGNQVEDQQVSCLWQGDYL  374 (683)
Q Consensus       306 ----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l  374 (683)
                          -...+... ....+..+........++..+..|.+..++...-..       +.-+..........+....++..+
T Consensus       102 ~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~l  180 (276)
T 3no0_A          102 YKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYL  180 (276)
T ss_dssp             TCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEE
T ss_pred             hhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEE
Confidence                11122221 345666666666667888889999988887543211       111222223333334444567789


Q ss_pred             EEEecCCcEEEEecCCCC------cceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEE--EcCC
Q psy15995        375 LTVSLSGFISYLDVNNPS------TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITR--WNAK  432 (683)
Q Consensus       375 ~~~~~~g~i~~~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~--w~~~  432 (683)
                      +..+..|..+...+..-.      .-+..+ ...+.+..+....+...++..+.+|.+..  ++..
T Consensus       181 l~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~  245 (276)
T 3no0_A          181 LVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK  245 (276)
T ss_dssp             EEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred             EEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence            999999999888765311      112222 23445555544444456666677777776  6654

>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1

Probab=85.09  E-value=22  Score=32.32  Aligned_cols=68  Identities=10%  Similarity=0.085  Sum_probs=44.1

Q ss_pred             EccCCCEEEEEcCCCcEEEEEcCCCccCcc-------eeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCC
Q psy15995        529 LDHEHGLVAVGGADSKVHIYELNNKSLSPK-------AELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDF  596 (683)
Q Consensus       529 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-------~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~  596 (683)
                      ...+...++..+.+|.+..+....-....+       ..+.....|..+..-.++..+++.+..|..+..++...
T Consensus       158 ~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~  232 (312)
T 1suu_A          158 IVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKI  232 (312)
T ss_dssp             EECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred             EeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence            333445677778889888888765222211       11223456667666556677888899999999988643

>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}

Probab=84.97  E-value=27  Score=33.12  Aligned_cols=247  Identities=13%  Similarity=0.069  Sum_probs=125.7

Q ss_pred             EEEecCCEEEEEecCCcEEEEecCCCCc-------ceee---ee-eccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC
Q psy15995        366 SCLWQGDYLLTVSLSGFISYLDVNNPST-------PIRV---IK-GHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG  434 (683)
Q Consensus       366 ~~~~~~~~l~~~~~~g~i~~~~~~~~~~-------~~~~---~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~  434 (683)
                      .+.......++...+|.+..|-.....+       ....   +. .....+..++++....+.+.-..||.|..|-....
T Consensus        57 ~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~  136 (389)
T 3kci_A           57 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED  136 (389)
T ss_dssp             EEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGG
T ss_pred             EEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCC
Confidence            3444667777888899999996543211       0000   11 11223555666666677777788999999954321


Q ss_pred             Cc-----------ceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEe
Q psy15995        435 EN-----------DRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTV  503 (683)
Q Consensus       435 ~~-----------~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (683)
                      ..           ...........|..++......+....+|.|..|-............    ....       .    
T Consensus       137 GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~----~~~~-------~----  201 (389)
T 3kci_A          137 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS----EDQL-------K----  201 (389)
T ss_dssp             GTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSC----CCEE-------E----
T ss_pred             CcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCC----cccc-------c----
Confidence            10           01111112235777777778888888999999998654322111000    0000       0    


Q ss_pred             ceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccC----------cceee-cCCcCeeEEEE
Q psy15995        504 KQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLS----------PKAEL-DHLGPVTDCSF  572 (683)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----------~~~~~-~~~~~v~~~~~  572 (683)
                              ...+ .......+..++........++-..||.|+.|-......+          +.... -....|..++.
T Consensus       202 --------p~~v-~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~  272 (389)
T 3kci_A          202 --------PKLV-EALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC  272 (389)
T ss_dssp             --------EEEC-GGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred             --------ceEe-cccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeC
Confidence                    0000 0011223444554443345555567888888865421110          00000 01223555554


Q ss_pred             CCCCCEEEEEeCCCeEEEEECCCCccccc------c---cee-eecccEEEEEecCCCCeEEEeecCCcEEEEeCCCC
Q psy15995        573 SPSNEYLVASDAHRKVVLYRVPDFELAHN------K---EWG-FHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASP  640 (683)
Q Consensus       573 s~~~~~l~~~~~d~~i~i~~~~~~~~~~~------~---~~~-~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~  640 (683)
                      .  ..+.++-..+|.|+.|-....-.+-.      .   ... .....|..++..  ....+....||.|+.|-....
T Consensus       273 G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G--~~h~~al~~~G~v~~wG~n~~  346 (389)
T 3kci_A          273 G--SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTWGDNDE  346 (389)
T ss_dssp             E--TTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTCCEEEEECCTT
T ss_pred             C--CCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEec--cCeEEEECCCCCEEEeeCCCC
Confidence            3  33455557889999997653111100      0   000 011235555543  334555678999999987643

>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}

Probab=84.52  E-value=23  Score=32.09  Aligned_cols=244  Identities=14%  Similarity=0.091  Sum_probs=125.4

Q ss_pred             CCCCEEEEEeCCCcEEEEcCCCCCcceec-------cCCCCcceeEEE-Ee-CCeEEEEEcCCeEEEEeCCCCcccCCce
Q psy15995        412 PDRGTVFTGSHDGFITRWNAKTGENDRVQ-------GAGHGNQINGMK-AT-GELLYTCGIDDTIKQVDLSSNAYSGPEV  482 (683)
Q Consensus       412 ~~~~~l~~~~~dg~i~~w~~~~~~~~~~~-------~~~~~~~v~~~~-~~-~~~l~~~~~d~~i~~~~~~~~~~~~~~~  482 (683)
                      |+...+++.+.+|.|+--.+..-+.....       .......+..+. .+ .+.++..+..|.+..+....-.....  
T Consensus         1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~--   78 (307)
T 1zi0_A            1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATR--   78 (307)
T ss_dssp             CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCS--
T ss_pred             CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCC--
Confidence            34567788889999887766543221110       011223333322 22 77888888888877665443211110  


Q ss_pred             ecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEE-c--cCCCEEEEEcCCCcEEEEEcCCCccCcc-
Q psy15995        483 KLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISL-D--HEHGLVAVGGADSKVHIYELNNKSLSPK-  558 (683)
Q Consensus       483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~l~~~~~dg~i~i~d~~~~~~~~~-  558 (683)
                          ...+....                   ....+.....+..+.. .  .++.+++..+.+|.++.-.+..-..... 
T Consensus        79 ----~a~G~~i~-------------------~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~  135 (307)
T 1zi0_A           79 ----GARGRPIV-------------------NLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTA  135 (307)
T ss_dssp             ----SSCCEEGG-------------------GTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTT
T ss_pred             ----CCCCeEhh-------------------hccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccC
Confidence                00000000                   0001111222333322 1  3456788889999999988753222111 


Q ss_pred             ----eeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCcccc-------ccceeeecccEEEEEecCCCCeEEEee
Q psy15995        559 ----AELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAH-------NKEWGFHSAKVNCVAWSPDSALVASGS  627 (683)
Q Consensus       559 ----~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~-------~~~~~~h~~~v~~~~~s~d~~~l~~~~  627 (683)
                          ..+...+.+-.+....+...++..+.+|.+..++...-....       ...+. ....|.++...+++..|++.+
T Consensus       136 G~~~i~l~~~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T  214 (307)
T 1zi0_A          136 GKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTAT  214 (307)
T ss_dssp             CEESSCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEE
T ss_pred             CeEEEEECCCCEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEE
Confidence                111223555555555556677788889998888875322111       11221 345577776655666788889


Q ss_pred             cCCcEEEEeCCCCce-------eeEeecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEeec
Q psy15995        628 LDTTIIIWSLASPAK-------HIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       628 ~d~~v~iw~~~~~~~-------~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~~  681 (683)
                      ..|.++-.++..-..       ...+......+.+..+... ++..++..+.+|.+.-.+++
T Consensus       215 ~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~  276 (307)
T 1zi0_A          215 QNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVS  276 (307)
T ss_dssp             TTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGG
T ss_pred             cCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEecc
Confidence            999988887743211       1111111123556555544 55666777777777665554

>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}

Probab=82.96  E-value=31  Score=32.28  Aligned_cols=108  Identities=19%  Similarity=0.137  Sum_probs=63.2

Q ss_pred             ccCCCEEEEEECCCcEEEEECCC-------CceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCC---C---
Q psy15995        325 KPDGTQLLTASGDKTCKLWDIET-------KSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN---P---  391 (683)
Q Consensus       325 ~~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~---~---  391 (683)
                      -|+...+++.+.+|.|+--.+..       ++-...+..........+......+.++..+..|.+..+....   .   
T Consensus         4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~   83 (370)
T 3l6v_A            4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN   83 (370)
T ss_dssp             CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred             ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence            46778899999999999865432       1223333344444444455555677888899999887766432   1   


Q ss_pred             --Cccee-eee-eccccEEEEEEeC---CCCEEEEEeCCCcEEEEcCC
Q psy15995        392 --STPIR-VIK-GHNKPITALALSP---DRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       392 --~~~~~-~~~-~~~~~v~~~~~~~---~~~~l~~~~~dg~i~~w~~~  432 (683)
                        +.++. .+. .....|.++..-+   +..+|+.++..|.++...+.
T Consensus        84 a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~  131 (370)
T 3l6v_A           84 ARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLS  131 (370)
T ss_dssp             SCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGG
T ss_pred             cCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHH
Confidence              11111 111 1234555554332   34577788888888776653

>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1

Probab=82.62  E-value=28  Score=31.63  Aligned_cols=243  Identities=11%  Similarity=0.074  Sum_probs=125.7

Q ss_pred             CCCCEEEEEeCCCcEEEEcCCCCCccee-------ccCCCCcceeEEEEe--CCeEEEEEcCCeEEEEeCCCCcccCCce
Q psy15995        412 PDRGTVFTGSHDGFITRWNAKTGENDRV-------QGAGHGNQINGMKAT--GELLYTCGIDDTIKQVDLSSNAYSGPEV  482 (683)
Q Consensus       412 ~~~~~l~~~~~dg~i~~w~~~~~~~~~~-------~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~~~~~~~~~~~~~~  482 (683)
                      ++..++++.+.+|.|+--.+..-+....       ........+..+...  .+.++..+..|.++.+....-.....  
T Consensus         6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r--   83 (312)
T 1suu_A            6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSR--   83 (312)
T ss_dssp             --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred             CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCc--
Confidence            4567788899999998876543322111       111122333333333  67888888999888776543211100  


Q ss_pred             ecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEcc---CCCEEEEEcCCCcEEEEEcCCCccC---
Q psy15995        483 KLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDH---EHGLVAVGGADSKVHIYELNNKSLS---  556 (683)
Q Consensus       483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~---  556 (683)
                      ...+.+    +                   .....+.....+..+...+   +..+++..+..|.++...+..-...   
T Consensus        84 ~~~G~~----i-------------------~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~  140 (312)
T 1suu_A           84 ASKGQN----I-------------------SELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSR  140 (312)
T ss_dssp             ----CB----G-------------------GGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----
T ss_pred             cCCCcC----h-------------------hhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCC
Confidence            000000    0                   0000111112233332222   4567888899999988877543211   


Q ss_pred             --cceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccc-------cccceeeecccEEEEEecCCCCeEEEee
Q psy15995        557 --PKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELA-------HNKEWGFHSAKVNCVAWSPDSALVASGS  627 (683)
Q Consensus       557 --~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-------~~~~~~~h~~~v~~~~~s~d~~~l~~~~  627 (683)
                        ....+...+.+..+....++..++..+.+|.+..+....-...       ....+. ....|.++...+++..|++.+
T Consensus       141 G~~~i~L~~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt  219 (312)
T 1suu_A          141 GVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVS  219 (312)
T ss_dssp             CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEE
T ss_pred             cEEEEecCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEE
Confidence              1112223556666665555667888889999999987642211       111221 244566666655666788889


Q ss_pred             cCCcEEEEeCCCCcee-------eEeecC-CCCCCeeEE-EEccCCeEEEeeCCCcEEEEee
Q psy15995        628 LDTTIIIWSLASPAKH-------IIIKNA-HPQSQITRL-QWLDNDLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       628 ~d~~v~iw~~~~~~~~-------~~~~~~-~~~~~v~~l-~~~~~~~l~s~~~d~~v~vw~~  680 (683)
                      ..|..+...+..-...       ..+... .....+.++ .+.++..++..+..|.+.-..+
T Consensus       220 ~~G~~kr~~~~e~~~~~R~~kGv~~~~~~k~~~~~lv~~~~~~~~~~l~~~t~~g~~~r~~~  281 (312)
T 1suu_A          220 ENGYGKRLNMSKISELKRGATGYTSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRTVA  281 (312)
T ss_dssp             TTSEEEEEEGGGSCBCCTTCCCEECSCTTCTTTCSEEEEEEECTTCEEEEEETTCEEEEEEG
T ss_pred             CCCceEEEEHHHhcccCCCCCCEEeeEccCCCCCeEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence            9999888887543211       111111 112344443 3445566666666675443333

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=82.08  E-value=33  Score=32.09  Aligned_cols=197  Identities=8%  Similarity=0.059  Sum_probs=107.4

Q ss_pred             ccceEEEEECCCCcEEEE--ecC-------------CCCEEEEeCCCc--ccccccccccCCCCcccceeeeeecceeee
Q psy15995         85 SCAVNVAKYSPSGFYIAS--GDI-------------SGKVRIWDTVNK--EHILKNEFHPIGGPIKDIGTLLSLTSIRNI  147 (683)
Q Consensus        85 ~~~v~~~~~s~d~~~las--~~~-------------dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  147 (683)
                      --.|..+...+++++-+.  |-.             --+|.+||+.++  +.++++.+...-.        ........+
T Consensus        86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~--------~~~S~l~di  157 (381)
T 3q6k_A           86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLV--------EKPTYFGGF  157 (381)
T ss_dssp             SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGC--------CCGGGEEEE
T ss_pred             eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhc--------ccCCccceE
Confidence            346888888888865553  211             125899999999  8888887753111        111445666


Q ss_pred             Eee---cc----ceEEEee-cCCccEEEEeccccceeeecc--cccc--------------CCCeeEEEEcCC----CCe
Q psy15995        148 LVL---SI----GFYIASG-DISGKVRIWDTVNKEHILKNE--FHPI--------------GGPIKDIAWSPD----NQR  199 (683)
Q Consensus       148 ~~s---~~----~~~l~~~-~~d~~i~iwd~~~~~~~~~~~--~~~~--------------~~~i~~~~~s~~----~~~  199 (683)
                      ++.   |+    +.++... ...+-|.|+|+.+++.-....  +.+.              ...+..|+++|+    ++.
T Consensus       158 ~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~  237 (381)
T 3q6k_A          158 AVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRP  237 (381)
T ss_dssp             EEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCE
T ss_pred             EEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeE
Confidence            666   22    3333333 346789999999875322111  1111              247889999998    788


Q ss_pred             EEEEecCCceEEEEEE--ccCC---CceeeeecCC--cCeEEEEee-cCCCeEEEEeeCCCeEEEEcCCCC-----ceee
Q psy15995        200 MVVVGEGRERFGHVFM--SETG---TSVGEISGQS--KPINSCDFK-PSRPFRIITGSEDNTIAVFEGPPF-----KFKM  266 (683)
Q Consensus       200 l~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~--~~v~~~~~~-~~~~~~l~~~~~d~~i~iw~~~~~-----~~~~  266 (683)
                      |....-.......|-.  +...   ..+..+-...  ..-..+++. .+|. ++++--....|..|+..+.     ....
T Consensus       238 LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~-ly~~~~~~~aI~~w~~~~~~~~~~n~~~  316 (381)
T 3q6k_A          238 AYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKV-IFFAEANTKQVSCWNTQKMPLRMKNTDV  316 (381)
T ss_dssp             EEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCE-EEEEESSSSEEEEEETTSCSBCGGGEEE
T ss_pred             EEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCe-EEEEeccCCeEEEEeCCCCccccCceEE
Confidence            8877665533222211  1111   1122221111  233345665 4554 4667777889999997641     1111


Q ss_pred             ecc-ccccCeEEEEECCCCCEEEEE
Q psy15995        267 TKQ-EHSRFVQAVRYSPSGSHFASA  290 (683)
Q Consensus       267 ~~~-~~~~~v~~~~~~~~~~~l~~~  290 (683)
                      ..+ ..-..+..+.+.++|.+.+..
T Consensus       317 l~~d~~l~~pd~~~i~~~g~Lwv~s  341 (381)
T 3q6k_A          317 VYTSSRFVFGTDISVDSKGGLWFMS  341 (381)
T ss_dssp             EEECTTCCSEEEEEECTTSCEEEEE
T ss_pred             EEECCCccccCeEEECCCCeEEEEE
Confidence            111 122345667666666544444

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=81.97  E-value=3.5  Score=41.33  Aligned_cols=58  Identities=24%  Similarity=0.395  Sum_probs=46.1

Q ss_pred             CeEEEeeCCCCCeEEEecC-------------CeEEEEeCCCCcccccccCc-ccceEEEEECCCCcEEEEe
Q psy15995         46 QPIVLGGDPKGKNFLYTNG-------------NSVIIRNIENPAISDIYTEH-SCAVNVAKYSPSGFYIASG  103 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~-------------~~i~v~~~~~~~~~~~~~~h-~~~v~~~~~s~d~~~las~  103 (683)
                      .+--|+|+|+|++++...+             +.+.+.+..++++.+.+.++ ...++.++|+||++.|...
T Consensus       477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn  548 (592)
T 3zwu_A          477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred             CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence            4457889999997777643             35777888889888888776 5789999999999888764

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=81.49  E-value=29  Score=30.98  Aligned_cols=186  Identities=13%  Similarity=0.024  Sum_probs=101.5

Q ss_pred             cCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceee
Q psy15995        273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVS  352 (683)
Q Consensus       273 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  352 (683)
                      ..|..++..... .++. . ||.|+.|-....-.+..-.  .....|..++...+. .++. . ||.+..|-......+.
T Consensus        24 ~~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~--~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg   95 (282)
T 3qhy_B           24 SGVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPA--ATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTT   95 (282)
T ss_dssp             SSCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCG--GGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTC
T ss_pred             CCCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCc--cCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCC
Confidence            357777765443 2333 4 8999999754322111110  133467777765432 2333 4 8999999765432211


Q ss_pred             EEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        353 EFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                      .   +.........+.......++.. +|.+..|-.....+.- ........|..++...+. .++ -. ||.|..|-..
T Consensus        96 ~---P~~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~~G~~~-~~~-l~-~G~v~~wG~n  167 (282)
T 3qhy_B           96 V---PAEARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTT-VPAEAQSGVTALDGGVYT-ALA-VK-NGGVIAWGDN  167 (282)
T ss_dssp             C---CGGGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECSSE-EEE-EE-TTEEEEEECC
T ss_pred             C---CcccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCC-CCccCCCCeEEEEcccCE-EEE-EE-CCEEEEecCC
Confidence            0   1111123334444556666667 9999999876533321 111123457777654432 222 33 7999999765


Q ss_pred             CCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCc
Q psy15995        433 TGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNA  476 (683)
Q Consensus       433 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~  476 (683)
                      ........ ......|..++......+.. .||.+..|-.....
T Consensus       168 ~~gqlg~p-~~~~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~g  209 (282)
T 3qhy_B          168 YFGQTTVP-AEAQSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYK  209 (282)
T ss_dssp             TTSTTSCC-GGGGSSEEEEEECSSEEEEE-ETTEEEEEECCTTS
T ss_pred             CCCCCCCc-eecCCCeEEEEecCCEEEEE-ECCeEEEEECCCCC
Confidence            43332211 12235677777776665555 79999999876553

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=81.44  E-value=5.4  Score=39.46  Aligned_cols=59  Identities=24%  Similarity=0.390  Sum_probs=45.6

Q ss_pred             CCeEEEeeCCCCCeEEEecC-------------CeEEEEeCCCCcccccccCc-ccceEEEEECCCCcEEEEe
Q psy15995         45 GQPIVLGGDPKGKNFLYTNG-------------NSVIIRNIENPAISDIYTEH-SCAVNVAKYSPSGFYIASG  103 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~~-------------~~i~v~~~~~~~~~~~~~~h-~~~v~~~~~s~d~~~las~  103 (683)
                      +.+-.+.|+++|.+.+....             +.+..++..++++...+.+. ...++.++||||+++|.++
T Consensus       476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~  548 (592)
T 4a9v_A          476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred             CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence            45567889999988775532             26888888888887777654 4679999999999988765

>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1

Probab=81.26  E-value=32  Score=31.40  Aligned_cols=234  Identities=11%  Similarity=0.102  Sum_probs=126.9

Q ss_pred             cCCCeEEEEeeCCCeEEEEcCCCCc----eeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCC---------CCe
Q psy15995        239 PSRPFRIITGSEDNTIAVFEGPPFK----FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGA---------SAD  305 (683)
Q Consensus       239 ~~~~~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~---------~~~  305 (683)
                      |+.+ .+++.+.+|.|+--.+...+    ....+. ..+.+..+........|+..+..|.++-+...         .|.
T Consensus         3 ~~e~-~~v~lT~~G~IKr~~~~~~~~~~~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~   80 (323)
T 1wp5_A            3 ASED-VIVTVTKDGYVKRTSLRSYAASNGQDFAMK-DTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQ   80 (323)
T ss_dssp             SCCE-EEEEEETTCEEEEEEHHHHHHTTTCCCCCC-TTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred             cCCc-EEEEEeCCCEEEEeEHHHhhhcCccccccC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCc
Confidence            4444 48888999999877543221    111222 23445555555555667777778887666432         222


Q ss_pred             eEEeccCCccccCeEEEEEccC---CCEEEEEECCCcEEEEECCCCce------eeEEEecCcceeceEEEEecCCEEEE
Q psy15995        306 LVSELGNPAHKGGVYAVAWKPD---GTQLLTASGDKTCKLWDIETKSV------VSEFIMGNQVEDQQVSCLWQGDYLLT  376 (683)
Q Consensus       306 ~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~  376 (683)
                      .+..+-.......|.++...++   +.+++..+.+|.++...+.....      +..+.................+.++.
T Consensus        81 ~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l  160 (323)
T 1wp5_A           81 HIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFL  160 (323)
T ss_dssp             EGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEE
T ss_pred             ChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEE
Confidence            2222111113445666544332   56789999999999988753221      11112222223333333346678999


Q ss_pred             EecCCcEEEEecCCCCc------ceeeee-eccccEEEEEEeCCCC-EEEEEeCCCcEEEEcCCCCC-------cceecc
Q psy15995        377 VSLSGFISYLDVNNPST------PIRVIK-GHNKPITALALSPDRG-TVFTGSHDGFITRWNAKTGE-------NDRVQG  441 (683)
Q Consensus       377 ~~~~g~i~~~~~~~~~~------~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~w~~~~~~-------~~~~~~  441 (683)
                      .+.+|.+..+....-..      -++.+. .....|.++...+++. .+++.+..|..+..++..-.       -.....
T Consensus       161 ~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~  240 (323)
T 1wp5_A          161 VTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILR  240 (323)
T ss_dssp             EETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSC
T ss_pred             EeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECee
Confidence            99999998887753111      111111 1234566665544445 78888888887776654311       111111


Q ss_pred             --CCCCcceeEE-EEe-CCeEEEEEcCCeEEEEeCCC
Q psy15995        442 --AGHGNQINGM-KAT-GELLYTCGIDDTIKQVDLSS  474 (683)
Q Consensus       442 --~~~~~~v~~~-~~~-~~~l~~~~~d~~i~~~~~~~  474 (683)
                        ......+..+ ... ++.++..+..|.+....+..
T Consensus       241 ~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~  277 (323)
T 1wp5_A          241 ELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD  277 (323)
T ss_dssp             CCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred             ecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence              1122234433 333 56777888888877766654

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=80.85  E-value=39  Score=32.01  Aligned_cols=217  Identities=11%  Similarity=0.064  Sum_probs=101.9

Q ss_pred             CeeEEEEcCC--CCeEEEEecCCceEEEEEEc-cCCCceeeeec-------------------CCcCeEEEEeecCCCeE
Q psy15995        187 PIKDIAWSPD--NQRMVVVGEGRERFGHVFMS-ETGTSVGEISG-------------------QSKPINSCDFKPSRPFR  244 (683)
Q Consensus       187 ~i~~~~~s~~--~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------------------~~~~v~~~~~~~~~~~~  244 (683)
                      .|.++++.|.  ...+.++....    .++.. +.++.-..+..                   ....+.++.+.|..+..
T Consensus       116 ~i~~l~~~~~~~~~~l~~g~~~g----gl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~  191 (394)
T 3b7f_A          116 HVFWLTPGHASEPGTWYAGTSPQ----GLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKH  191 (394)
T ss_dssp             EEEEEEECCTTSTTCEEEEEETT----EEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTC
T ss_pred             ceeEEEeCCCCCCCEEEEEecCC----cEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCE
Confidence            5778999872  45566655432    23333 33433222211                   12357889998853323


Q ss_pred             EEEeeCCCeEEEEcCCCCceeeeccc----c--------ccCeEEEEECCC-CCEEEEEcCCCcEEEEeCCCCeeEEecc
Q psy15995        245 IITGSEDNTIAVFEGPPFKFKMTKQE----H--------SRFVQAVRYSPS-GSHFASAGFDGKVFLYDGASADLVSELG  311 (683)
Q Consensus       245 l~~~~~d~~i~iw~~~~~~~~~~~~~----~--------~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~  311 (683)
                      +..+..++.+...+-...........    +        ...+.++++.|+ ...|.++...+ |...+ ..++.-..+.
T Consensus       192 l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~-D~G~tW~~~~  269 (394)
T 3b7f_A          192 LYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD-RREGVWKRIG  269 (394)
T ss_dssp             EEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE-TTTTEEECGG
T ss_pred             EEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC-CCCCcceECC
Confidence            55565555555443221111111100    0        134889999986 35666666444 55544 2333333332


Q ss_pred             CCccc---cCeEEEEEcc-CCCEEEEEEC-----------CCcEEEEECCC-CceeeEEEecCcc-------eeceEEEE
Q psy15995        312 NPAHK---GGVYAVAWKP-DGTQLLTASG-----------DKTCKLWDIET-KSVVSEFIMGNQV-------EDQQVSCL  368 (683)
Q Consensus       312 ~~~~~---~~i~~~~~~~-~~~~l~~~~~-----------dg~i~iwd~~~-~~~~~~~~~~~~~-------~~~~~~~~  368 (683)
                      .....   ..+..+++.| +...++++..           ++...+|.... ++....+...-+.       ....+.+.
T Consensus       270 ~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~  349 (394)
T 3b7f_A          270 DAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTAD  349 (394)
T ss_dssp             GGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEEC
T ss_pred             CCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEEC
Confidence            10111   3457788876 3445555542           23345555544 3333333211111       01235555


Q ss_pred             ec-CCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEe
Q psy15995        369 WQ-GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALS  411 (683)
Q Consensus       369 ~~-~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~  411 (683)
                      +. ...+++++..+.+..-  ......-..+..+-..+.+++|.
T Consensus       350 p~~~~~l~~g~~~g~l~~S--~D~G~tW~~~~~~lp~~~~v~~~  391 (394)
T 3b7f_A          350 AHAPVGVYFGTTGGEIWAS--ADEGEHWQCIASHLPHIYAVQSA  391 (394)
T ss_dssp             CSSSCCEEEECTTSCEEEE--SSTTSBCEEEECSCSCEEEEEEE
T ss_pred             CCCCCEEEEEeCCCeEEEE--CCCCCCceEcccCCCCeeEEEEe
Confidence            53 3556666655554433  22233333344344456666653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	683
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-34
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-10
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-09
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-08
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-06
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	3e-29
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	3e-10
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	1e-07
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	3e-07
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-28
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-26
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	7e-21
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	8e-15
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-12
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-07
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-05
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	5e-28
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-27
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	5e-21
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-20
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	6e-15
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-27
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-22
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	5e-15
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	6e-11
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-24
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	5e-12
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-11
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	6e-08
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-22
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	6e-14
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-11
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	4e-11
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	6e-07
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	3e-22
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-17
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	7e-15
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-14
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	3e-13
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	6e-13
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	5e-12
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-10
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	8e-10
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	1e-21
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	5e-19
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	1e-14
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-13
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	1e-07
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-06
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	7e-05
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-21
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	3e-14
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	7e-14
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-07
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	3e-07
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-18
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	8e-17
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	8e-16
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-14
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	3e-12
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-06
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-16
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	5e-15
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	7e-15
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	6e-13
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	5e-08
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-16
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	9e-16
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-14
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	2e-15
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	2e-14
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	5e-10
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-15
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-14
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	1e-11
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-10
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	5e-08
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	1e-05
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	0.002
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	5e-15
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-14
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-13
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-12
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	4e-11
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-14
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-13
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	5e-13
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-12
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	4e-04
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-10
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-08
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	3e-08
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	6e-04
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	0.003
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	0.004
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-10
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-09
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	3e-09
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-04
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	0.002
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	3e-09
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	1e-07
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	7e-09
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	6e-06
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	8e-05
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	2e-06
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	3e-06
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	4e-06
d1xipa_	381	b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (	2e-06
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	2e-04
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	0.001
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	0.003

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  131 bits (330), Expect = 1e-34
 Identities = 75/315 (23%), Positives = 118/315 (37%), Gaps = 8/315 (2%)

Query: 32  NKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVA 91
              +F +LPRT RG  +VLG  P G    Y NG SV    + +   ++IYTEHS    VA
Sbjct: 5   QTALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVA 64

Query: 92  KYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS 151
           K SPSG+Y ASGD+ G VRIWDT    HILK       GP+KDI        I  +    
Sbjct: 65  KTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGR 124

Query: 152 IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFG 211
             F       +G      T     +   +F P            +   +      + +  
Sbjct: 125 ERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKST 184

Query: 212 HVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH 271
               ++   SV      S   ++        +  + G++               +    H
Sbjct: 185 FGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV-------FEDDSLKNVAH 237

Query: 272 SRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQL 331
           S  V  + +SP G+  ASA  D  + +++ A+  +   +     +     +        L
Sbjct: 238 SGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTI-PVGTRIEDQQLGIIWTKQAL 296

Query: 332 LTASGDKTCKLWDIE 346
           ++ S +      + E
Sbjct: 297 VSISANGFINFVNPE 311

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 59.5 bits (142), Expect = 3e-10
 Identities = 41/300 (13%), Positives = 79/300 (26%), Gaps = 14/300 (4%)

Query: 183 PIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRP 242
              G    +  +P   ++                 + T     +  S         PS  
Sbjct: 15  TARGTAVVLGNTPAGDKIQYCNGTSVY---TVPVGSLTDTEIYTEHSHQTTVAKTSPSG- 70

Query: 243 FRIITGSEDNTI--AVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD 300
           +   +G     +            K T    S  V+ + +       A+ G   + F + 
Sbjct: 71  YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 130

Query: 301 GASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQV 360
                  S          + +V +KP     + +  D                    +  
Sbjct: 131 FLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK 190

Query: 361 EDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTP------IRVIKGHNKPITALALSPDR 414
               V     G    +    G I   +  + +              H+  +  L  SPD 
Sbjct: 191 FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 250

Query: 415 GTVFTGSHDGFITRWNAKTGENDRV--QGAGHGNQINGMKATGELLYTCGIDDTIKQVDL 472
             + + S D  I  WN  T + ++    G    +Q  G+  T + L +   +  I  V+ 
Sbjct: 251 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 57.6 bits (137), Expect = 1e-09
 Identities = 24/315 (7%), Positives = 64/315 (20%), Gaps = 28/315 (8%)

Query: 277 AVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG 336
            +  +P+G           V+     S           H          P G    +   
Sbjct: 22  VLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIY--TEHSHQTTVAKTSPSGYYCASGDV 78

Query: 337 DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIR 396
               ++WD    + + +  +       +          +     G   +  V    T   
Sbjct: 79  HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS 138

Query: 397 VIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGE 456
                 +     ++       F               G   + +     +          
Sbjct: 139 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYN 198

Query: 457 LLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVS 516
              +           +  N   G                           + V     + 
Sbjct: 199 PDGSLFASTGGDGTIVLYNGVDG-------------------------TKTGVFEDDSLK 233

Query: 517 SLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSN 576
           ++        ++   +   +A   AD  + I+ +    +     +             + 
Sbjct: 234 NVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTK 293

Query: 577 EYLVASDAHRKVVLY 591
           + LV+  A+  +   
Sbjct: 294 QALVSISANGFINFV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 53.4 bits (126), Expect = 3e-08
 Identities = 45/308 (14%), Positives = 82/308 (26%), Gaps = 25/308 (8%)

Query: 391 PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQING 450
           PS P R  +G       L  +P    +   +    +      +  +  +    H +Q   
Sbjct: 10  PSLP-RTARGT---AVVLGNTPAGDKIQYCNGTS-VYTVPVGSLTDTEIY-TEHSHQTTV 63

Query: 451 MK--ATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQ----------PRGLDIDENTL 498
            K   +G    +  +   ++  D +   +                               
Sbjct: 64  AKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEG 123

Query: 499 VTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPK 558
                         +  +        +S+          + G+D                
Sbjct: 124 RERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKS 183

Query: 559 AELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGF-----HSAKVNC 613
              +H   V    ++P      ++     +VLY   D       E        HS  V  
Sbjct: 184 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 243

Query: 614 VAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHP-QSQITRLQWLDNDLLVSVGQD 672
           + WSPD   +AS S D TI IW++A+      I      + Q   + W     LVS+  +
Sbjct: 244 LTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW-TKQALVSISAN 302

Query: 673 CNTKIWEI 680
                   
Sbjct: 303 GFINFVNP 310

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 50.3 bits (118), Expect = 3e-07
 Identities = 16/87 (18%), Positives = 26/87 (29%), Gaps = 3/87 (3%)

Query: 549 ELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHS 608
           E +  +L P       G       +P+ + +        V    V          +  HS
Sbjct: 2   EFSQTALFPSLPRTARGTAVVLGNTPAGDKI-QYCNGTSVYTVPVGSLTDTE--IYTEHS 58

Query: 609 AKVNCVAWSPDSALVASGSLDTTIIIW 635
            +      SP     ASG +   + IW
Sbjct: 59  HQTTVAKTSPSGYYCASGDVHGNVRIW 85

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 47.2 bits (110), Expect = 3e-06
 Identities = 35/241 (14%), Positives = 71/241 (29%), Gaps = 10/241 (4%)

Query: 244 RIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGAS 303
           +I   +   ++               EHS      + SPSG + AS    G V ++D   
Sbjct: 31  KIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ 89

Query: 304 ADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTC-KLWDIETKSVVSEFIMGNQVED 362
              + +   P   G V  ++W  +  ++      +       +      +  + G     
Sbjct: 90  TTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAM 149

Query: 363 QQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSH 422
             V       + +          +    P         H K + ++  +PD     +   
Sbjct: 150 NSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG 209

Query: 423 DGFITRWNAKTGENDRVQGAGHGNQINGMKA--------TGELLYTCGIDDTIKQVDLSS 474
           DG I  +N   G    V        +    +         G  + +   D TIK  ++++
Sbjct: 210 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 269

Query: 475 N 475
            
Sbjct: 270 L 270

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  116 bits (290), Expect = 3e-29
 Identities = 94/370 (25%), Positives = 151/370 (40%), Gaps = 64/370 (17%)

Query: 33  KYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIEN-----PAISDIYTEHSCA 87
           K I    P TQR     L  DP      Y  G S  +R +++     P +       S  
Sbjct: 6   KEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSV 65

Query: 88  VNVAKYSP--SGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIR 145
           V   K+SP     Y+ SGD SGKV +W                                 
Sbjct: 66  VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFD---------------------------- 97

Query: 146 NILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE 205
                                  ++ + E  +K+EF  + GPI DI+W  + +R+ VVGE
Sbjct: 98  ----------------------KESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE 135

Query: 206 GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK-- 263
           GR+ FG     ++G S+GE+SG S+ IN+C  K SRP R +T  +D ++  ++GPPFK  
Sbjct: 136 GRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS 195

Query: 264 -FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVF--LYDGASADLVSELGNPAHKGGVY 320
               T  +   FV+ V +SP    F       +        +   L     +     G  
Sbjct: 196 ASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGI 255

Query: 321 AVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIM-GNQVEDQQVSCLWQGD-YLLTVS 378
                 D  +  T   D T ++WD+ T   V ++ +   Q+ +QQV  +  G+  ++++S
Sbjct: 256 FALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS 315

Query: 379 LSGFISYLDV 388
           L G +++ ++
Sbjct: 316 LDGTLNFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.9 bits (143), Expect = 3e-10
 Identities = 37/372 (9%), Positives = 85/372 (22%), Gaps = 68/372 (18%)

Query: 315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL 374
            +     +++ P    +    G                                      
Sbjct: 16  QRNFTTHLSYDPTTNAIAYPCGK------------------------------------- 38

Query: 375 LTVSLSGFISYLDVNNPST-PIRVIKGHN-KPITALALSPDRG--TVFTGSHDGFITRWN 430
                S F+  LD  +    P+    GH    +T +  SP +G   + +G   G +  W 
Sbjct: 39  -----SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 93

Query: 431 AKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRG 490
               +          ++   +               I  +           V  G    G
Sbjct: 94  WTFDKESNSVEVNVKSEFQVLA------------GPISDISWDFEGRRLCVVGEGRDNFG 141

Query: 491 LDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYEL 550
           + I  ++  ++           A            ++  D                    
Sbjct: 142 VFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH 201

Query: 551 NNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAK 610
           + +    +          + S       +      +           L + ++       
Sbjct: 202 HKQGSFVRD--------VEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG 253

Query: 611 VNCVAWSPDSALVASGSLDTTIIIWSLAS--PAKHIIIKNAHPQSQITRLQWLDNDLLVS 668
                   DS   A+   D TI +W + +    +   +      +Q   +    N  ++S
Sbjct: 254 GIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIIS 313

Query: 669 VGQDCNTKIWEI 680
           +  D     +E+
Sbjct: 314 LSLDGTLNFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.8 bits (122), Expect = 1e-07
 Identities = 48/345 (13%), Positives = 95/345 (27%), Gaps = 53/345 (15%)

Query: 226 SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ---EHSRFVQAVRYSP 282
           S Q        + P+         +   +   +    K     Q     S  V  V++SP
Sbjct: 14  STQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSP 73

Query: 283 --SGSHFASAGFDGKVFLYDGASADLVSELG------NPAHKGGVYAVAWKPDGTQLLTA 334
                +  S    GKV ++        + +            G +  ++W  +G +L   
Sbjct: 74  IKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 133

Query: 335 SG--DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY--LDVNN 390
               D        ++ + + E    +Q  +       +    +TV   G + +       
Sbjct: 134 GEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK 193

Query: 391 PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDG-----FITRWNAKTGENDRVQGAGHG 445
            S   R        +  +  SPD G              F  +        +  Q    G
Sbjct: 194 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG 253

Query: 446 NQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQ 505
                     +   T G D TI+  D+++              +   +D+     +  +Q
Sbjct: 254 GIFALSWLDSQKFATVGADATIRVWDVTT----------SKCVQKWTLDKQ---QLGNQQ 300

Query: 506 ISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYEL 550
           + +V  G                    +G +     D  ++ YEL
Sbjct: 301 VGVVATG--------------------NGRIISLSLDGTLNFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.7 bits (119), Expect = 3e-07
 Identities = 34/310 (10%), Positives = 72/310 (23%), Gaps = 25/310 (8%)

Query: 186 GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT--SVGEISG-QSKPINSCDFKPSRP 242
                +++ P     +    G+  F             V + +G  S  + +  F P + 
Sbjct: 18  NFTTHLSYDPTTNA-IAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKG 76

Query: 243 -FRIITGSEDNTI--------AVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD 293
              + +G E   +                  K   Q  +  +  + +   G      G  
Sbjct: 77  SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG 136

Query: 294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSE 353
              F    +     S      H   + A   K          GD    ++        S 
Sbjct: 137 RDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA 196

Query: 354 FIMGNQVEDQQVSCL------WQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITA 407
               +  +   V  +       +    +                   I   +   +    
Sbjct: 197 SDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIF 256

Query: 408 LALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT-----GELLYTCG 462
                D     T   D  I  W+  T +  +        Q+   +          + +  
Sbjct: 257 ALSWLDSQKFATVGADATIRVWDVTTSKCVQKW-TLDKQQLGNQQVGVVATGNGRIISLS 315

Query: 463 IDDTIKQVDL 472
           +D T+   +L
Sbjct: 316 LDGTLNFYEL 325

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  114 bits (285), Expect = 2e-28
 Identities = 56/279 (20%), Positives = 98/279 (35%), Gaps = 6/279 (2%)

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
              + S    GK+ IWD+     +  +        +   A++P    +   G       +
Sbjct: 67  SRLLVSASQDGKLIIWDSYTTNKV--HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
              +  G                  +     +I+T S D T A+++    +   T   H+
Sbjct: 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT 184

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL 332
             V ++  +P    F S   D    L+D              H+  + A+ + P+G    
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF--TGHESDINAICFFPNGNAFA 242

Query: 333 TASGDKTCKLWDIETKSVVSEFIMGNQVED-QQVSCLWQGDYLLTVSLSGFISYLDVNNP 391
           T S D TC+L+D+     +  +   N +     VS    G  LL        +  D    
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302

Query: 392 STPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
                V+ GH+  ++ L ++ D   V TGS D F+  WN
Sbjct: 303 -DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  108 bits (269), Expect = 3e-26
 Identities = 40/297 (13%), Positives = 91/297 (30%), Gaps = 16/297 (5%)

Query: 394 PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK- 452
             R ++GH   I A+    D   + + S DG +  W++ T            + +     
Sbjct: 47  TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAY 105

Query: 453 -ATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGS---------QPRGLDIDENTLVTVT 502
             +G  +   G+D+     +L +   +    +  +         +    +    +    T
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165

Query: 503 VKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELD 562
                I       +      +  S+SL  +  L   G  D+   ++++            
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT-G 224

Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H   +    F P+              L+ +   +             +  V++S    L
Sbjct: 225 HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL 284

Query: 623 VASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIW 678
           + +G  D    +W      +  ++   H  ++++ L    D   + +   D   KIW
Sbjct: 285 LLAGYDDFNCNVWDALKADRAGVLA-GH-DNRVSCLGVTDDGMAVATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 92.5 bits (228), Expect = 7e-21
 Identities = 50/323 (15%), Positives = 93/323 (28%), Gaps = 37/323 (11%)

Query: 315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL 374
           H   +YA+ W  D   L++AS D    +WD  T + V    + +              ++
Sbjct: 54  HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSS-------------WV 100

Query: 375 LTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG 434
           +T + +   +Y+          +     +           G     S   F+      T 
Sbjct: 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS 160

Query: 435 ENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDID 494
             D                                  L  +       KL       D+ 
Sbjct: 161 SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL------WDVR 214

Query: 495 ENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHI-YELNNK 553
           E           S +               ++I         A G  D+   +     ++
Sbjct: 215 EGMCRQTFTGHESDI---------------NAICFFPNGNAFATGSDDATCRLFDLRADQ 259

Query: 554 SLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNC 613
            L   +  + +  +T  SFS S   L+A        ++     + A       H  +V+C
Sbjct: 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG--VLAGHDNRVSC 317

Query: 614 VAWSPDSALVASGSLDTTIIIWS 636
           +  + D   VA+GS D+ + IW+
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 74.0 bits (180), Expect = 8e-15
 Identities = 51/335 (15%), Positives = 103/335 (30%), Gaps = 41/335 (12%)

Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGV 319
              + + T + H   + A+ +        SA  DGK+ ++D  + + V  +  P     V
Sbjct: 43  IQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI--PLRSSWV 100

Query: 320 YAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSL 379
              A+ P G  +     D  C +++++T+                +SC    D    V+ 
Sbjct: 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS 160

Query: 380 SGFISYL-DVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDR 438
           SG  +                GH   + +L+L+PD     +G+ D     W+ + G   +
Sbjct: 161 SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQ 220

Query: 439 VQGAGHGNQINGMK--ATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDEN 496
               GH + IN +     G    T   D T +                            
Sbjct: 221 TF-TGHESDINAICFFPNGNAFATGSDDATCR---------------------------- 251

Query: 497 TLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLS 556
                 +  +   +     S   I    +S+S      L+  G  D   ++++      +
Sbjct: 252 ------LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305

Query: 557 PKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLY 591
                 H   V+    +     +        + ++
Sbjct: 306 GVLA-GHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 65.9 bits (159), Expect = 3e-12
 Identities = 18/141 (12%), Positives = 42/141 (29%), Gaps = 14/141 (9%)

Query: 65  NSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNE 124
            S  + ++        +T H   +N   + P+G   A+G      R++D    + ++   
Sbjct: 206 ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265

Query: 125 FHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPI 184
              I               I ++     G  + +G       +WD +  +       H  
Sbjct: 266 HDNIICG------------ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD- 312

Query: 185 GGPIKDIAWSPDNQRMVVVGE 205
              +  +  + D   +     
Sbjct: 313 -NRVSCLGVTDDGMAVATGSW 332

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 51.3 bits (121), Expect = 2e-07
 Identities = 17/120 (14%), Positives = 38/120 (31%), Gaps = 17/120 (14%)

Query: 53  DPKGKNFLYTNGNSVI---IRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKV 109
            P G  F   + ++         +   ++  +    C +    +S SG  + +G      
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNC 294

Query: 110 RIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWD 169
            +WD +  +       H                 +  + V   G  +A+G     ++IW+
Sbjct: 295 NVWDALKADRAGVLAGHD--------------NRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.3 bits (103), Expect = 3e-05
 Identities = 12/103 (11%), Positives = 30/103 (29%), Gaps = 1/103 (0%)

Query: 12  GQPIVLGGDPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLY-TNGNSVIIR 70
           G     G D           ++ +              +     G+  L   +  +  + 
Sbjct: 238 GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297

Query: 71  NIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWD 113
           +      + +   H   V+    +  G  +A+G     ++IW+
Sbjct: 298 DALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  112 bits (281), Expect = 5e-28
 Identities = 47/325 (14%), Positives = 108/325 (33%), Gaps = 26/325 (8%)

Query: 314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDY 373
            H+  V  V + P  + +++AS D T K+WD ET           +     V  +     
Sbjct: 15  GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL----KGHTDSVQDISFDHS 70

Query: 374 LL--TVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNA 431
                   +     L        IR + GH+  ++++++ P+   + + S D  I  W  
Sbjct: 71  GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130

Query: 432 KTGENDRV-QGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRG 490
           +TG   +   G     ++      G L+ +C  D T++   +++        +       
Sbjct: 131 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVEC 190

Query: 491 LDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYEL 550
           +     +                  SS+       +         +  G  D  + ++++
Sbjct: 191 ISWAPES----------------SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 234

Query: 551 NNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAK 610
           +           H   V    F    +++++    + + ++   +           H   
Sbjct: 235 STGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLNAHEHF 291

Query: 611 VNCVAWSPDSALVASGSLDTTIIIW 635
           V  + +   +  V +GS+D T+ +W
Sbjct: 292 VTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  111 bits (277), Expect = 2e-27
 Identities = 56/346 (16%), Positives = 111/346 (32%), Gaps = 45/346 (13%)

Query: 84  HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTS 143
           H   V    + P    + S      +++WD    +     + H     ++D         
Sbjct: 16  HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGH--TDSVQD--------- 64

Query: 144 IRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV 203
                +            S  + I     +        H     +  ++  P+   +V  
Sbjct: 65  -----ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS- 118

Query: 204 GEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK 263
              R++   ++  +TG  V   +G  + +            I + S D T+ V+     +
Sbjct: 119 -ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL-IASCSNDQTVRVWVVATKE 176

Query: 264 FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVA 323
            K   +EH   V+ + ++P  S+ + +                           G     
Sbjct: 177 CKAELREHRHVVECISWAPESSYSSISEAT------------------------GSETKK 212

Query: 324 WKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFI 383
               G  LL+ S DKT K+WD+ T   +   + G+    + V     G ++L+ +    +
Sbjct: 213 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTL 271

Query: 384 SYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRW 429
              D  N    ++ +  H   +T+L        V TGS D  +  W
Sbjct: 272 RVWDYKNK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 92.1 bits (227), Expect = 5e-21
 Identities = 44/318 (13%), Positives = 93/318 (29%), Gaps = 31/318 (9%)

Query: 389 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQI 448
                    + GH  P+T +   P    + + S D  I  W+ +TG+ +R    GH + +
Sbjct: 4   IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL-KGHTDSV 62

Query: 449 NGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDI----DENTLVTVTVK 504
             +               +         +       G       +    + + +V+ +  
Sbjct: 63  QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD 122

Query: 505 QISIVENGAKVSSLPIDYEPSSI----SLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE 560
           +   +        +               + +  L+A    D  V ++ +  K    +  
Sbjct: 123 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 182

Query: 561 LDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHN------------------K 602
            +H   V   S++P + Y   S+A                +                   
Sbjct: 183 -EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 241

Query: 603 EWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQW-L 661
               H   V  V +      + S + D T+ +W   +      +  AH +  +T L +  
Sbjct: 242 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AH-EHFVTSLDFHK 299

Query: 662 DNDLLVSVGQDCNTKIWE 679
               +V+   D   K+WE
Sbjct: 300 TAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.3 bits (225), Expect = 1e-20
 Identities = 63/333 (18%), Positives = 116/333 (34%), Gaps = 22/333 (6%)

Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGV 319
           P    K     H   V  V + P  S   SA  D  + ++D  + D    L    H   V
Sbjct: 5   PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL--KGHTDSV 62

Query: 320 YAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSL 379
             +++   G  L + S D T KLWD +    +     G+      VS +  GD++++ S 
Sbjct: 63  QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVSIMPNGDHIVSASR 121

Query: 380 SGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRV 439
              I   +V      ++   GH + +  +  + D   + + S+D  +  W   T E    
Sbjct: 122 DKTIKMWEVQTG-YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 180

Query: 440 QGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLV 499
               H + +  +    E  Y+   + T  +   S     GP +  GS+ + +        
Sbjct: 181 L-REHRHVVECISWAPESSYSSISEATGSETKKSGK--PGPFLLSGSRDKTI-------- 229

Query: 500 TVTVKQISIVENGAKVSSLPI-DYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPK 558
                ++  V  G  + +L   D     +        +     D  + +++  NK     
Sbjct: 230 -----KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT 284

Query: 559 AELDHLGPVTDCSFSPSNEYLVASDAHRKVVLY 591
               H   VT   F  +  Y+V     + V ++
Sbjct: 285 LN-AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 74.0 bits (180), Expect = 6e-15
 Identities = 37/238 (15%), Positives = 79/238 (33%), Gaps = 35/238 (14%)

Query: 81  YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLS 140
              H   V+     P+G +I S      +++W+      +     H     +        
Sbjct: 97  MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN---- 152

Query: 141 LTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRM 200
                       G  IAS      VR+W    KE   +   H     ++ I+W+P++   
Sbjct: 153 ----------QDGTLIASCSNDQTVRVWVVATKECKAELREH--RHVVECISWAPESSYS 200

Query: 201 VVVGE------------------GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRP 242
            +                      R++   ++   TG  +  + G    +    F     
Sbjct: 201 SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK 260

Query: 243 FRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD 300
           F I++ ++D T+ V++    +   T   H  FV ++ +  +  +  +   D  V +++
Sbjct: 261 F-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  112 bits (281), Expect = 2e-27
 Identities = 69/428 (16%), Positives = 142/428 (33%), Gaps = 79/428 (18%)

Query: 39  LPRTQRGQ------PIVLGGDPKGKNFLYT--NGNSVIIRNIENPAISDI----YTEHSC 86
           +P  QR        P +L  D +           +  I+ N   P   D+      +H+ 
Sbjct: 4   VPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTS 63

Query: 87  AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRN 146
            V   K+S  G Y+A+G  +   +++   +   + +                        
Sbjct: 64  VVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDS------------------- 103

Query: 147 ILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEG 206
                                    + E++  +        I+ + +SPD + +     G
Sbjct: 104 ---------------------AANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT---G 139

Query: 207 RERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM 266
            E             +  I    +             ++++GS D T+ +++    +  +
Sbjct: 140 AEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL 199

Query: 267 TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP-----AHKGGVYA 321
           T                G + A+   D  V ++D  +  LV  L +       HK  VY+
Sbjct: 200 TLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS 259

Query: 322 VAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ----------- 370
           V +  DG  +++ S D++ KLW+++  +  S+    N    +      +           
Sbjct: 260 VVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN 319

Query: 371 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALA------LSPDRGTVFTGSHDG 424
            +Y+L+ S    + + D  +   P+ +++GH   + ++A      L P+     TGS D 
Sbjct: 320 DEYILSGSKDRGVLFWDKKS-GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDC 378

Query: 425 FITRWNAK 432
               W  K
Sbjct: 379 KARIWKYK 386

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 98.3 bits (243), Expect = 1e-22
 Identities = 53/389 (13%), Positives = 115/389 (29%), Gaps = 87/389 (22%)

Query: 315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL 374
           H   V  V +  DG  L T   +KT +++ +   S+V+                      
Sbjct: 61  HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDD----------------- 102

Query: 375 LTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG 434
                    S  + +  +         +  I ++  SPD   + TG+ D  I  W+ +  
Sbjct: 103 ---------SAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENR 153

Query: 435 ENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDID 494
           +   +      +  +            G  D                             
Sbjct: 154 KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDR---------------------------- 185

Query: 495 ENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKS 554
                  TV+   +      ++    D   +      +   +A G  D  V +++     
Sbjct: 186 -------TVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 238

Query: 555 LSPKAELD------HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELA--------- 599
           L  + + +      H   V    F+   + +V+    R V L+ + +             
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 298

Query: 600 -HNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRL 658
                +  H   V  VA + +   + SGS D  ++ W   S    ++++  H ++ +  +
Sbjct: 299 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ-GH-RNSVISV 356

Query: 659 QWL-------DNDLLVSVGQDCNTKIWEI 680
                     + ++  +   DC  +IW+ 
Sbjct: 357 AVANGSSLGPEYNVFATGSGDCKARIWKY 385

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 75.2 bits (183), Expect = 5e-15
 Identities = 60/400 (15%), Positives = 113/400 (28%), Gaps = 111/400 (27%)

Query: 231 PINSCDFKPSRPFRIITGSEDNTIAVFE-GPPFKFKMTKQ---EHSRFVQAVRYSPSGSH 286
           P    D         +    ++   ++    P +  +      +H+  V  V++S  G +
Sbjct: 17  PPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEY 76

Query: 287 FASAGFDGKVFLYDGASADLVSEL----------------GNPAHKGGVYAVAWKPDGTQ 330
            A+ G +    +Y  +   LV+ L                 +P+    + +V + PDG  
Sbjct: 77  LAT-GCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 135

Query: 331 LLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ-------------------- 370
           L T + D+  ++WDIE + +V       Q                               
Sbjct: 136 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 195

Query: 371 ---------------------GDYLLTVSLSGFISYLDVNNPS------TPIRVIKGHNK 403
                                G Y+   SL   +   D           +      GH  
Sbjct: 196 QCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD 255

Query: 404 PITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK----------- 452
            + ++  + D  +V +GS D  +  WN +   N       +                   
Sbjct: 256 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVA 315

Query: 453 --ATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVE 510
                E + +   D  +   D  S          G+    L    N++++V V       
Sbjct: 316 TTQNDEYILSGSKDRGVLFWDKKS----------GNPLLMLQGHRNSVISVAV------- 358

Query: 511 NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYEL 550
                         +  SL  E+ + A G  D K  I++ 
Sbjct: 359 -------------ANGSSLGPEYNVFATGSGDCKARIWKY 385

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.5 bits (150), Expect = 6e-11
 Identities = 46/336 (13%), Positives = 104/336 (30%), Gaps = 48/336 (14%)

Query: 393 TPIRVIKGHNKPITALALSPDR---GTVFTGSHDGFITRWNAKTGENDRV---QGAGHGN 446
            P      H+KPI    L  D            + +   +N        V   +   H +
Sbjct: 4   VPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTS 63

Query: 447 QINGMK--ATGELLYTCGIDDTIKQVDLSSNAYSG---PEVKLGSQPRGLDIDENTLVTV 501
            +  +K    GE L T G + T +   +S  +       +      P  L+   +    +
Sbjct: 64  VVCCVKFSNDGEYLAT-GCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDL 122

Query: 502 TVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL 561
            ++ +    +G  +++   D       +++   ++ + G +  ++  +         +  
Sbjct: 123 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS 182

Query: 562 DHL--------------------GPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFEL--- 598
                                  G  T        +Y+ A    R V ++      L   
Sbjct: 183 GDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVER 242

Query: 599 --AHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAK----------HIII 646
             + N+    H   V  V ++ D   V SGSLD ++ +W+L +                +
Sbjct: 243 LDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEV 302

Query: 647 KNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEIA 681
                +  +  +    +++ ++S  +D     W+  
Sbjct: 303 TYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK 338

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  102 bits (253), Expect = 1e-24
 Identities = 67/297 (22%), Positives = 119/297 (40%), Gaps = 25/297 (8%)

Query: 394 PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKA 453
            ++ I GHNK ITAL ++P    + +GS+DG I  W++ +          H N I  +  
Sbjct: 5   VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ------DHSNLIVSLDN 54

Query: 454 T-GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENG 512
           +  +   +   DDT+K   ++ + +        +   G       ++T     + +    
Sbjct: 55  SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTA----VLTNDDDLLILQSFT 110

Query: 513 AKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSF 572
             +        P S     ++ +       + + +++L++  +S   +       +  S 
Sbjct: 111 GDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISI 170

Query: 573 SPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNC---------VAWSPDSALV 623
           SPS  Y+ A D   K++LY +   E+  ++     S                   +  LV
Sbjct: 171 SPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLV 230

Query: 624 ASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           A+GSLDT I I+S+  P K I   NAH +  +  L W     LVS G D   K W +
Sbjct: 231 ATGSLDTNIFIYSVKRPMKIIKALNAH-KDGVNNLLWETPSTLVSSGADACIKRWNV 286

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.0 bits (156), Expect = 5e-12
 Identities = 31/281 (11%), Positives = 65/281 (23%), Gaps = 25/281 (8%)

Query: 84  HSCAVNVAKYSPSGFYIASGDISGKVRIWDT---------------VNKEHILKNEFHPI 128
           H+  +     +P    + SG   G++  W +                +K     +     
Sbjct: 12  HNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDD 67

Query: 129 GGPIKDIGTLLSLTSIRNILVLSIGFYIASGD----ISGKVRIWDTVNKEHILKNEFHPI 184
              +  I      +  +     + GF     +    +  +    D +    +        
Sbjct: 68  TLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVS 127

Query: 185 GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFR 244
                      +   + V             +        IS                  
Sbjct: 128 LSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKIL 187

Query: 245 IITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA 304
           +                               A          A+   D  +F+Y     
Sbjct: 188 LYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 247

Query: 305 DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI 345
             + +  N AHK GV  + W+   T L+++  D   K W++
Sbjct: 248 MKIIKALN-AHKDGVNNLLWETPST-LVSSGADACIKRWNV 286

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.7 bits (150), Expect = 2e-11
 Identities = 37/293 (12%), Positives = 74/293 (25%), Gaps = 34/293 (11%)

Query: 149 VLSIGF-YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR 207
           + ++    + SG   G++  W          +        I  +  S   +   +  +  
Sbjct: 16  ITALTVNPLISGSYDGRIMEWS-------SSSMHQDHSNLIVSLDNSKAQEYSSISWDDT 68

Query: 208 ERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT 267
            +   +   E G+     S  +    +                                 
Sbjct: 69  LKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLI---------------LQSFTGDI 113

Query: 268 KQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPD 327
            +           S S ++ A    +G        S   VS       +     ++  P 
Sbjct: 114 IKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPS 173

Query: 328 GTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLL----------TV 377
            T +          L+D++++ V +        +   +S                   T 
Sbjct: 174 ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATG 233

Query: 378 SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
           SL   I    V  P   I+ +  H   +  L       T+ +   D  I RWN
Sbjct: 234 SLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP-STLVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.3 bits (123), Expect = 6e-08
 Identities = 33/285 (11%), Positives = 73/285 (25%), Gaps = 14/285 (4%)

Query: 314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIET-----KSVVSEFIMGNQVEDQQVSCL 368
            H  G+ A+   P    L++ S D     W   +      +++         E   +S  
Sbjct: 11  GHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWD 66

Query: 369 WQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITR 428
                               +  +     +  ++  +  L             +      
Sbjct: 67  DTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAV 126

Query: 429 WNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQP 488
             ++      ++                      +      + +S +        +  + 
Sbjct: 127 SLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKI 186

Query: 489 RGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIY 548
              D+    + T      +   N           E  +   + E  LVA G  D+ + IY
Sbjct: 187 LLYDLQSREVKTSRWAFRTSKINAIS----WKPAEKGANEEEIEEDLVATGSLDTNIFIY 242

Query: 549 ELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRV 593
            +       KA   H   V +  +   +  LV+S A   +  + V
Sbjct: 243 SVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV 286

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 97.0 bits (239), Expect = 1e-22
 Identities = 97/296 (32%), Positives = 151/296 (51%), Gaps = 8/296 (2%)

Query: 395 IRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK-A 453
            +V  GHNK ITAL+ S D  T+F+   +G I  W+  TG ++RV    H   I G+K  
Sbjct: 5   DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64

Query: 454 TGELLYTCGIDDTIKQVDLSSNAYSGPEVKL----GSQPRGLDIDENTLVTVTVKQISIV 509
           +   L+T   DD +K V    +     +                 +  +      +   +
Sbjct: 65  SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAI 124

Query: 510 ENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVT- 568
            +  K++ +PI Y  S ++L ++   VAVGG DSKVH+Y+L+  S+S    + H   +T 
Sbjct: 125 YSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITS 184

Query: 569 DCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSL 628
               +     +    + + +      +FELAH   W FH+AKV CV+WSPD+  +A+GSL
Sbjct: 185 VAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSL 244

Query: 629 DTTIIIWSLASPAKH-IIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIAPF 683
           D ++I+W++  P+ H IIIK AH  S +  + WL+   +VS GQD N K W + PF
Sbjct: 245 DNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV-PF 299

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 70.8 bits (171), Expect = 6e-14
 Identities = 41/292 (14%), Positives = 78/292 (26%), Gaps = 35/292 (11%)

Query: 84  HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTS 143
           H+ A+     S  G  + S D  G +  WD                     + T +  TS
Sbjct: 11  HNKAITALSSSADGKTLFSADAEGHINSWDISTGISN-----RVFPDVHATMITGIKTTS 65

Query: 144 IRNILVLSIGFYIASGDISGK-----------------------------VRIWDTVNKE 174
             ++  +S   ++      G                                 +  +   
Sbjct: 66  KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIY 125

Query: 175 HILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINS 234
              K    PI      +A S D Q + V G+  +   +     + + V  I   ++  + 
Sbjct: 126 SHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSV 185

Query: 235 CDFKPSRPFRIITGSEDNTIAVFE-GPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD 293
                         S                  +   H+  V  V +SP     A+   D
Sbjct: 186 AFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLD 245

Query: 294 GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI 345
             V +++         +   AH           + T +++A  D   K W++
Sbjct: 246 NSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 62.7 bits (150), Expect = 3e-11
 Identities = 48/329 (14%), Positives = 100/329 (30%), Gaps = 38/329 (11%)

Query: 267 TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP 326
            +  H++ + A+  S  G    SA  +G +  +D ++        +  H   +  +    
Sbjct: 7   VRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPD-VHATMITGIKTTS 65

Query: 327 DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYL 386
               L T S D   K+       V S   + N++  Q +      D  + V+      Y 
Sbjct: 66  K-GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVA----ACYK 120

Query: 387 DVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGN 446
            +   S         +   + +ALS D+  V  G  D  +  +         V+   H  
Sbjct: 121 HIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPA 180

Query: 447 QINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQI 506
           +I  +  +    +    D + K                                +     
Sbjct: 181 EITSVAFSNNGAFLVATDQSRKV-------------------------------IPYSVA 209

Query: 507 SIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL-DHLG 565
           +  E     S      + + +S   ++  +A G  D+ V ++ +N  S  P      H  
Sbjct: 210 NNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAM 269

Query: 566 PVTDCSFSPSNEYLVASDAHRKVVLYRVP 594
              +     +   +V++     +  + VP
Sbjct: 270 SSVNSVIWLNETTIVSAGQDSNIKFWNVP 298

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 62.3 bits (149), Expect = 4e-11
 Identities = 44/330 (13%), Positives = 74/330 (22%), Gaps = 50/330 (15%)

Query: 315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL 374
           H   + A++   DG  L +A  +     WDI T      F                    
Sbjct: 11  HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFP------------------- 51

Query: 375 LTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG 434
                                     H   IT +  +           D         +G
Sbjct: 52  ------------------------DVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSG 87

Query: 435 ENDRVQGAGHGNQINGMKA--TGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLD 492
            +     A   +      A      +        I                        D
Sbjct: 88  VDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSND 147

Query: 493 IDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADS-----KVHI 547
                +     K      +GA VS +     P+ I+        A   A         + 
Sbjct: 148 KQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYS 207

Query: 548 YELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFH 607
              N +     +   H   V   S+SP N  L        V+++ +           G H
Sbjct: 208 VANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAH 267

Query: 608 SAKVNCVAWSPDSALVASGSLDTTIIIWSL 637
           +          +   + S   D+ I  W++
Sbjct: 268 AMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 49.2 bits (115), Expect = 6e-07
 Identities = 35/292 (11%), Positives = 74/292 (25%), Gaps = 10/292 (3%)

Query: 186 GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS-GQSKPINSCDFKPSRPFR 244
             I  ++ S D + +       E   + +   TG S        +  I            
Sbjct: 13  KAITALSSSADGKTLFSADA--EGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLF 70

Query: 245 IITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA 304
            ++  +   +    G                       +    A A     + +Y     
Sbjct: 71  TVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYS---- 126

Query: 305 DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQ 364
                    ++     A++       +               + S V   +   ++    
Sbjct: 127 HGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVA 186

Query: 365 VSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDG 424
            S           S       +  N           H   +  ++ SPD   + TGS D 
Sbjct: 187 FSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDN 246

Query: 425 FITRWNAKTGENDRV--QGAGHGNQINGMK-ATGELLYTCGIDDTIKQVDLS 473
            +  WN     +  +  +GA   + +N +       + + G D  IK  ++ 
Sbjct: 247 SVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 97.2 bits (240), Expect = 3e-22
 Identities = 41/380 (10%), Positives = 105/380 (27%), Gaps = 34/380 (8%)

Query: 275 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA 334
           +    ++   +  A    + +V +Y+ +    V       H G V  V W PD  +++T 
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69

Query: 335 SGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVS----LSGFISYLDVNN 390
             D+   +W ++ ++     ++       +       +    V     +     +   N+
Sbjct: 70  GTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND 129

Query: 391 PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQING 450
                 + K     + +L   P+   +  GS D     ++A   E +             
Sbjct: 130 WWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMP 189

Query: 451 MKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVE 510
                        + +     +    +S    ++        +            ++  +
Sbjct: 190 F-------GELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTV-----------CLADAD 231

Query: 511 NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKS--LSPKAELDHLGPVT 568
               V++L  +  P           +   G D    ++  ++ +  LS    LD     +
Sbjct: 232 KKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSS 291

Query: 569 DCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDS----ALVA 624
               +    +                    A       H   V+ ++         +   
Sbjct: 292 QRGLTARERFQNLD------KKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFC 345

Query: 625 SGSLDTTIIIWSLASPAKHI 644
           +  +D  + IW + S    +
Sbjct: 346 TTGMDGGMSIWDVRSLESAL 365

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 82.2 bits (201), Expect = 2e-17
 Identities = 47/373 (12%), Positives = 103/373 (27%), Gaps = 41/373 (10%)

Query: 87  AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRN 146
            ++   ++     IA    + +V I++    + +  +E     G +  +           
Sbjct: 9   PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVD---------- 58

Query: 147 ILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEG 206
                    I +        +W    +          I    + + W+P+ ++  V    
Sbjct: 59  --WAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS 116

Query: 207 RERFGHVFMSETGTSVGEISGQSKPIN-SCDFKPSRPFRIITGSEDNTIAVFEG------ 259
           R      F  E    V +   +                 +  GS D    +F        
Sbjct: 117 RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVE 176

Query: 260 ------------PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLV 307
                       P  +          +V  V +S +GS  A    D  V L D      V
Sbjct: 177 ERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 236

Query: 308 SELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSC 367
           +     +    + AV +  +   L+ A  D    L+  ++ +    F       D     
Sbjct: 237 AT--LASETLPLLAVTFITES-SLVAAGHDCFPVLFTYDSAAGKLSFG---GRLDVPKQS 290

Query: 368 LWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGT----VFTGSHD 423
             +G        +         + +    +   H   ++ +++            T   D
Sbjct: 291 SQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMD 350

Query: 424 GFITRWNAKTGEN 436
           G ++ W+ ++ E+
Sbjct: 351 GGMSIWDVRSLES 363

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 74.5 bits (181), Expect = 7e-15
 Identities = 47/354 (13%), Positives = 94/354 (26%), Gaps = 32/354 (9%)

Query: 230 KPINSCDFKPSRPFRIITGSEDNTIAVF--EGPPFKFKMTKQEHSRFVQAVRYSPSGSHF 287
           +PI+   +   R   I     ++ + ++   G  +      +EH+  V  V ++P  +  
Sbjct: 8   EPISCHAWNKDRTQ-IAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRI 66

Query: 288 ASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIET 347
            + G D   +++          L           V W P+  +    SG +   +   E 
Sbjct: 67  VTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQ 126

Query: 348 KSVVSEFIMGNQVEDQQVSCLWQGD---YLLTVSLSGFISYLDVNNPSTPIR-------- 396
           ++         +     V  L        L   S                 R        
Sbjct: 127 ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGS 186

Query: 397 ---------VIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQ 447
                            +  +  S +   V   SHD  +   +A          +     
Sbjct: 187 KMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPL 246

Query: 448 INGMKATGELLYTCGIDDTIKQVDLSSNAYS---GPEVKLGSQPRGLDIDENTLVTVTVK 504
           +     T   L   G D         S A     G  + +  Q     +          K
Sbjct: 247 LAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDK 306

Query: 505 QISIVENGAKVSSLPIDYEPS----SISLDHEHG--LVAVGGADSKVHIYELNN 552
           + S   + A  + L   ++ S    S+    +         G D  + I+++ +
Sbjct: 307 KASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 73.7 bits (179), Expect = 1e-14
 Identities = 40/351 (11%), Positives = 82/351 (23%), Gaps = 64/351 (18%)

Query: 54  PKGKNFLY-TNGNSVIIRNIENPAISDIYT--EHSCAVNVAKYSPSGFYIASGDISGKVR 110
                     N + V I          ++   EH+  V    ++P    I +        
Sbjct: 17  KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAY 76

Query: 111 IWDTVNKEHILKNEFH-----------------PIGGPIKDIGTLLSLTSIRNILVLSIG 153
           +W    +                             G    + ++       +  V    
Sbjct: 77  VWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI 136

Query: 154 FYIASGDIS-----------------GKVRIWDTVNKE----------------HILKNE 180
                  +                   K RI+    KE                  L  E
Sbjct: 137 KKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE 196

Query: 181 FHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPS 240
                G +  + +S +  R+  V         V +++    +   +  S+ +        
Sbjct: 197 SSSSCGWVHGVCFSANGSRVAWVSH----DSTVCLADADKKMAVATLASETLPLLAVTFI 252

Query: 241 RPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD 300
               ++    D    +F       K++        +        +       D K     
Sbjct: 253 TESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEG 312

Query: 301 GASADLVSELGNPAHKGGVYAVAWKPDG----TQLLTASGDKTCKLWDIET 347
            A+A       +  HK  V  ++    G    +Q  T   D    +WD+ +
Sbjct: 313 SAAAG---AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 69.5 bits (168), Expect = 3e-13
 Identities = 42/399 (10%), Positives = 89/399 (22%), Gaps = 87/399 (21%)

Query: 319 VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVS 378
           +   AW  D TQ+     +    +++                                  
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW---------------------------- 41

Query: 379 LSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDR 438
                           +  +K HN  +T +  +PD   + T   D     W  K      
Sbjct: 42  --------------VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 87

Query: 439 VQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSS-------------NAYSGPEVKLG 485
                  N+               +    + + +                      V   
Sbjct: 88  TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSL 147

Query: 486 SQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEP------------------SSI 527
                  +          +  S      +    P  +                      +
Sbjct: 148 DWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGV 207

Query: 528 SLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVA-SDAHR 586
                   VA    DS V + + + K  +         P+   +F   +  + A  D   
Sbjct: 208 CFSANGSRVAWVSHDSTVCLADADKKM-AVATLASETLPLLAVTFITESSLVAAGHDCFP 266

Query: 587 KVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIII 646
            +  Y     +L+               +    +A     +LD         S A    +
Sbjct: 267 VLFTYDSAAGKLSFGG----RLDVPKQSSQRGLTARERFQNLDKKASSEG--SAAAGAGL 320

Query: 647 KNAHPQSQITRLQWLDND-----LLVSVGQDCNTKIWEI 680
            + H ++ ++++  L           + G D    IW++
Sbjct: 321 DSLH-KNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 358

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 68.3 bits (165), Expect = 6e-13
 Identities = 18/116 (15%), Positives = 41/116 (35%)

Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
            + P++  +++     +     + +V +Y     +     E   H+ +V  V W+PDS  
Sbjct: 6   LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65

Query: 623 VASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIW 678
           + +   D    +W+L        +           ++W  N+   +VG        
Sbjct: 66  IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 121

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 65.6 bits (158), Expect = 5e-12
 Identities = 46/347 (13%), Positives = 104/347 (29%), Gaps = 30/347 (8%)

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE---R 209
              IA    + +V I++    + +  +E     G +  + W+PD+ R+V  G  R     
Sbjct: 19  RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW 78

Query: 210 FGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ 269
                  +    +  I+  ++ +     +        +          E   +  K  K+
Sbjct: 79  TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK 138

Query: 270 EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP---------------- 313
                V ++ + P+    A+   D K  ++     ++                       
Sbjct: 139 PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS 198

Query: 314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDY 373
           +  G V+ V +  +G+++   S D T  L D + K  V+            ++  +  + 
Sbjct: 199 SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET---LPLLAVTFITES 255

Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
            L  +       L   + +       G        +           + D   +     +
Sbjct: 256 SLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEG--S 313

Query: 434 GENDRVQGAGHGNQINGM------KATGELLYTCGIDDTIKQVDLSS 474
                   + H N ++ +      KA      T G+D  +   D+ S
Sbjct: 314 AAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 61.4 bits (147), Expect = 1e-10
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 1/75 (1%)

Query: 606 FHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DND 664
           F    ++C AW+ D   +A    +  + I+  +      + +      Q+T + W  D++
Sbjct: 5   FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN 64

Query: 665 LLVSVGQDCNTKIWE 679
            +V+ G D N  +W 
Sbjct: 65  RIVTCGTDRNAYVWT 79

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.7 bits (140), Expect = 8e-10
 Identities = 44/320 (13%), Positives = 86/320 (26%), Gaps = 42/320 (13%)

Query: 401 HNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQG-AGHGNQINGMK--ATGEL 457
             +PI+  A + DR  +    ++  +  +     +  +V     H  Q+ G+        
Sbjct: 6   LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65

Query: 458 LYTCGIDDTIK------------QVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQ 505
           + TCG D                 V L  N  +       ++ +      + ++++   +
Sbjct: 66  IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE 125

Query: 506 ISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL---- 561
                   K    PI     S+       L+A G  D K  I+    K +  +       
Sbjct: 126 QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 185

Query: 562 -------------DHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHS 608
                           G V    FS +   +        V L                 +
Sbjct: 186 SKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM--AVATLASET 243

Query: 609 AKVNCVAWSPDSALVASGSLDTTII--------IWSLASPAKHIIIKNAHPQSQITRLQW 660
             +  V +  +S+LVA+G     ++          S           +    +   R Q 
Sbjct: 244 LPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQN 303

Query: 661 LDNDLLVSVGQDCNTKIWEI 680
           LD              +  +
Sbjct: 304 LDKKASSEGSAAAGAGLDSL 323

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.9 bits (234), Expect = 1e-21
 Identities = 56/349 (16%), Positives = 108/349 (30%), Gaps = 36/349 (10%)

Query: 80  IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLL 139
           +   H   V        G  I SG     +++W  V  + +     H  G          
Sbjct: 11  VLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG---------- 59

Query: 140 SLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQR 199
                    V S        +I        T+   +    E                   
Sbjct: 60  ---------VWSSQM---RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE 107

Query: 200 MVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG 259
             VV   R+    V+  ETG  +  + G    +    +      R+++G+ D  + V++ 
Sbjct: 108 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR---RVVSGAYDFMVKVWDP 164

Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGV 319
                  T Q H+  V        G H  S   D  + ++D  + + +       H+   
Sbjct: 165 ETETCLHTLQGHTNRVY--SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT--LTGHQSLT 220

Query: 320 YAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSL 379
             +  K +   L++ + D T K+WDI+T   +      N+ +       +  ++++T S 
Sbjct: 221 SGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSD 278

Query: 380 SGFISYLDVNNP----STPIRVIKGHNKPITALALSPDRGTVFTGSHDG 424
            G +   D+       +       G    +  +  S  +     GS +G
Sbjct: 279 DGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 327

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.8 bits (213), Expect = 5e-19
 Identities = 53/333 (15%), Positives = 113/333 (33%), Gaps = 17/333 (5%)

Query: 314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDY 373
            H   V     +  G ++++ S D T K+W   T   +             V      D 
Sbjct: 14  GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL----VGHTGGVWSSQMRDN 68

Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
           ++    +     +        I  + GH   +  + L   R  V +GS D  +  W+ +T
Sbjct: 69  IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIET 126

Query: 434 GENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDI 493
           G+   V   GH   +  ++  G  + +   D  +K  D  +           ++   L  
Sbjct: 127 GQCLHVLM-GHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 185

Query: 494 DENTLVTVTVKQISIVENGAKVSSL--PIDYEPSSISLDHEHGLVAVGGADSKVHIYELN 551
           D   +V+ ++     V +    + +     ++  +  ++ +  ++  G ADS V I+++ 
Sbjct: 186 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIK 245

Query: 552 NKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHN---KEWGFHS 608
                   +  +           +  +++ S     V L+ +   E   N    E G   
Sbjct: 246 TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG 305

Query: 609 AKVNCVAWSPDSALVASGSLDTT----IIIWSL 637
             V  +  S    + A GS + T    +++   
Sbjct: 306 GVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (178), Expect = 1e-14
 Identities = 43/295 (14%), Positives = 107/295 (36%), Gaps = 11/295 (3%)

Query: 389 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQI 448
                  +V+KGH+  +    L      + +GS D  +  W+A TG+  R    GH   +
Sbjct: 3   RGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGV 60

Query: 449 NGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISI 508
              +    ++ +   D T+K  +  +           S  R + + E  +V+ +      
Sbjct: 61  WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLR 120

Query: 509 VE--NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGP 566
           V      +   + + +  +   + ++   V  G  D  V +++   ++     +  H   
Sbjct: 121 VWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNR 179

Query: 567 VTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASG 626
           V    F     ++V+      + ++ V      H      H +  + +    +  ++ SG
Sbjct: 180 VYSLQFDGI--HVVSGSLDTSIRVWDVETGNCIHT--LTGHQSLTSGMELKDN--ILVSG 233

Query: 627 SLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIA 681
           + D+T+ IW + +      ++  +           + + +++   D   K+W++ 
Sbjct: 234 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 288

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (167), Expect = 3e-13
 Identities = 65/384 (16%), Positives = 122/384 (31%), Gaps = 55/384 (14%)

Query: 218 TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQA 277
              S   + G    + +C  +     RI++GS+DNT+ V+     K   T   H+  V +
Sbjct: 5   ELKSPKVLKGHDDHVITC-LQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 62

Query: 278 VRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD 337
            +   +     S     KV+  +           +  +              ++++ S D
Sbjct: 63  SQMRDNIIISGSTDRTLKVWNAETGECI------HTLYGHTSTVRCMHLHEKRVVSGSRD 116

Query: 338 KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRV 397
            T ++WDIET   +   +             + G  +++ +    +   D     T +  
Sbjct: 117 ATLRVWDIETGQCLHVLMGHV---AAVRCVQYDGRRVVSGAYDFMVKVWDPETE-TCLHT 172

Query: 398 IKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGEL 457
           ++GH   +   +L  D   V +GS D  I  W+ +TG        GH +  +GM+    +
Sbjct: 173 LQGHTNRVY--SLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL-TGHQSLTSGMELKDNI 229

Query: 458 LYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSS 517
           L +   D T+K  D+ +                                           
Sbjct: 230 LVSGNADSTVKIWDIKTGQCLQTLQG---------------------------------- 255

Query: 518 LPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNN----KSLSPKAELDHLGPVTDCSFS 573
            P  ++ +   L      V     D  V +++L      ++L         G V     S
Sbjct: 256 -PNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRAS 314

Query: 574 PSNEYL-VASDAHRKVVLYRVPDF 596
            +     V S    +     V DF
Sbjct: 315 NTKLVCAVGSRNGTEETKLLVLDF 338

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (123), Expect = 1e-07
 Identities = 25/171 (14%), Positives = 47/171 (27%), Gaps = 16/171 (9%)

Query: 38  TLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSG 97
           T   T +G    +         + +      IR  +    + I+T        +      
Sbjct: 168 TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 227

Query: 98  FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIA 157
             + SG+    V+IWD    + +   +                        +     ++ 
Sbjct: 228 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKH-------------QSAVTCLQFNKNFVI 274

Query: 158 SGDISGKVRIWDTVNKEHI---LKNEFHPIGGPIKDIAWSPDNQRMVVVGE 205
           +    G V++WD    E I   +  E    GG +  I  S       V   
Sbjct: 275 TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR 325

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (112), Expect = 2e-06
 Identities = 28/202 (13%), Positives = 57/202 (28%), Gaps = 27/202 (13%)

Query: 61  YTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHI 120
                 V + + E          H+  V        G ++ SG +   +R+WD      I
Sbjct: 153 GAYDFMVKVWDPETETCLHTLQGHTNRVY--SLQFDGIHVVSGSLDTSIRVWDVETGNCI 210

Query: 121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNE 180
                H                S+ + + L     + SG+    V+IWD    + +   +
Sbjct: 211 HTLTGH---------------QSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQ 254

Query: 181 FHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEI-----SGQSKPINSC 235
                           N  +    +G  +   ++  +TG  +  +      G    +   
Sbjct: 255 GPNKHQSAVTCLQFNKNFVITSSDDGTVK---LWDLKTGEFIRNLVTLESGGSGGVVWRI 311

Query: 236 DFKPSRPFRIITGSEDNTIAVF 257
               ++      GS + T    
Sbjct: 312 RASNTKLV-CAVGSRNGTEETK 332

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 7e-05
 Identities = 41/253 (16%), Positives = 79/253 (31%), Gaps = 10/253 (3%)

Query: 429 WNAKTGENDRVQGAGHGNQING-MKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQ 487
           W     ++ +V   GH + +   ++  G  + +   D+T+K     +       V     
Sbjct: 1   WRRGELKSPKVL-KGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59

Query: 488 PRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHI 547
                + +N +++ +  +   V N      +   Y  +S           V        +
Sbjct: 60  VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119

Query: 548 YELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFH 607
              + ++      L        C        +V+      V ++        H       
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGR-RVVSGAYDFMVKVWDPETETCLHT----LQ 174

Query: 608 SAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLV 667
                  +   D   V SGSLDT+I +W +        I        +T    L +++LV
Sbjct: 175 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDV---ETGNCIHTLTGHQSLTSGMELKDNILV 231

Query: 668 SVGQDCNTKIWEI 680
           S   D   KIW+I
Sbjct: 232 SGNADSTVKIWDI 244

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 94.9 bits (234), Expect = 1e-21
 Identities = 39/375 (10%), Positives = 74/375 (19%), Gaps = 44/375 (11%)

Query: 277 AVRYSPS-GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS 335
           A  +SP  G   A     G+ F+ D +   ++           +  V    D        
Sbjct: 7   AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV----PEPLRIRYVRRGGDTKVAFIHG 61

Query: 336 GD--KTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP-- 391
                   ++D  T            V    V    +   +           L+   P  
Sbjct: 62  TREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTV 121

Query: 392 -----STPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGN 446
                   I      +         P +     G     I  ++ +  +          +
Sbjct: 122 IERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHD 181

Query: 447 QINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQI 506
                 A  + LY           D     +S                   L+  +    
Sbjct: 182 YAPAFDADSKNLYYLSYRSLDPSPDRVVLNFS--------FEVVSKPFVIPLIPGSPNPT 233

Query: 507 SIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGP 566
            +V       +   D                         I                +  
Sbjct: 234 KLVPRSMTSEAGEYDLN---------------DMYKRSSPINVDPGDYRMIIPLESSILI 278

Query: 567 VTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASG 626
            +         Y   +     ++ Y V   ++            +  +  S D   V   
Sbjct: 279 YSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE------VKNNLTDLRLSADRKTVMVR 332

Query: 627 SLDTTIIIWSLASPA 641
             D  I  + L  P 
Sbjct: 333 KDDGKIYTFPLEKPE 347

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 72.6 bits (176), Expect = 3e-14
 Identities = 44/364 (12%), Positives = 77/364 (21%), Gaps = 39/364 (10%)

Query: 93  YSPS-GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS 151
           +SP  G  IA     G+  I D               G  +  +        IR +    
Sbjct: 10  FSPLDGDLIAFVS-RGQAFIQDVS-------------GTYVLKVP---EPLRIRYVRRGG 52

Query: 152 IGFYIA--SGDISGKVRIWDTVNKEHILKNEFHPI---GGPIKDIAWSPDNQRMVVVGEG 206
                          + I+D    +     E        G  ++  ++        +   
Sbjct: 53  DTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTV 112

Query: 207 RERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM 266
               G   + E               +             T               +   
Sbjct: 113 DLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF 172

Query: 267 TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN-----PAHKGGVYA 321
                +    A  +     +     +       D    +   E+ +     P   G    
Sbjct: 173 AATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNP 232

Query: 322 VAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQ------GDYLL 375
               P          D           +V           +  +             Y  
Sbjct: 233 TKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQ 292

Query: 376 TVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE 435
                G +   DV       R +      +T L LS DR TV     DG I  +  +  E
Sbjct: 293 GAPEKGVLLKYDVKT-----RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPE 347

Query: 436 NDRV 439
           ++R 
Sbjct: 348 DERT 351

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 71.4 bits (173), Expect = 7e-14
 Identities = 27/307 (8%), Positives = 72/307 (23%), Gaps = 22/307 (7%)

Query: 54  PKGKNFLYT---NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVR 110
              K         G+ + I +       + + E+   V       +G +    +   ++ 
Sbjct: 52  GDTKVAFIHGTREGDFLGIYDYRTGKA-EKFEENLGNVFAMGVDRNGKFAVVANDRFEIM 110

Query: 111 I--WDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIW 168
               +T     I ++    I        +             + G+ + +  +       
Sbjct: 111 TVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 170

Query: 169 DTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQ 228
                     +         K++ +     R +     R      F     +    I   
Sbjct: 171 IFAATTENSHDYAPAFDADSKNLYYLSY--RSLDPSPDRVVLNFSFEV--VSKPFVIPLI 226

Query: 229 SKPINSCDFKPSRPFRIITGSEDNTIAVFEGP------PFKFKMTKQEHSRFVQAVRYSP 282
               N     P          + N +     P       ++  +  +          +  
Sbjct: 227 PGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGE 286

Query: 283 SGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKL 342
             +++  A   G +  YD  +  +         K  +  +    D   ++    D     
Sbjct: 287 FAAYYQGAPEKGVLLKYDVKTRKVT------EVKNNLTDLRLSADRKTVMVRKDDGKIYT 340

Query: 343 WDIETKS 349
           + +E   
Sbjct: 341 FPLEKPE 347

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 52.2 bits (123), Expect = 1e-07
 Identities = 28/311 (9%), Positives = 73/311 (23%), Gaps = 35/311 (11%)

Query: 400 GHNKPITALALSPDRGTVFTGSHDG--FITRWNAKTGENDRVQGAGHGNQINGMKATGEL 457
                I  +    D    F        F+  ++ +TG+ ++ +         G+   G+ 
Sbjct: 40  PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKF 99

Query: 458 LYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISI--------- 508
                    I  VDL +   +  E    +      I +N+        +           
Sbjct: 100 AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 159

Query: 509 ------VENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNN------KSLS 556
                 +E     ++   +    + + D +   +      S     +             
Sbjct: 160 AIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSK 219

Query: 557 PKAELDHLGPVTDCSFSPSNEYLVASDAHRKV-----VLYRVPDFELAHNKEWGFHSAKV 611
           P       G        P +    A +              V   +              
Sbjct: 220 PFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY 279

Query: 612 NCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQW-LDNDLLVSVG 670
           +       +A          ++ + + +     +      ++ +T L+   D   ++   
Sbjct: 280 SVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEV------KNNLTDLRLSADRKTVMVRK 333

Query: 671 QDCNTKIWEIA 681
            D     + + 
Sbjct: 334 DDGKIYTFPLE 344

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 51.0 bits (120), Expect = 3e-07
 Identities = 12/168 (7%), Positives = 29/168 (17%), Gaps = 15/168 (8%)

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIG-----GPIKDIAWSPDNQRMVVV---- 203
              +            D V      +    P       G        P +          
Sbjct: 190 SKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL 249

Query: 204 -GEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF 262
               +              +  +       +                E   +  ++    
Sbjct: 250 NDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFA-AYYQGAPEKGVLLKYDVK-- 306

Query: 263 KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL 310
                  E    +  +R S           DGK++ +     +    +
Sbjct: 307 --TRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.2 bits (209), Expect = 2e-18
 Identities = 36/291 (12%), Positives = 83/291 (28%), Gaps = 32/291 (10%)

Query: 83  EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVN---KEHILKNEFHPIGGPIKDI---- 135
            H   V     S    ++ +G   G V++WD  +   K  + + +       I+      
Sbjct: 49  NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107

Query: 136 -GTLL---SLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDI 191
            G  L      S  +I  L+        +++        +      K  F         +
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167

Query: 192 AWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSED 251
               +   +       +    + +S  GT +      +   +    +  +  +    S+ 
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI 227

Query: 252 NTIAV-----------------FEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDG 294
            ++                           K     H   V +++++  G  F S G D 
Sbjct: 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN 287

Query: 295 KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI 345
            +  +       + +         V +     D   ++T SGDK   ++++
Sbjct: 288 LLNAWRTPYGASIFQSK---ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (196), Expect = 8e-17
 Identities = 46/376 (12%), Positives = 89/376 (23%), Gaps = 57/376 (15%)

Query: 271 HSRFVQAVRYSPSGSHFA-SAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGT 329
            S+   +   +  G         D  +       A  ++ L    H   V AV       
Sbjct: 8   GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLN---HGEVVCAVTISNPTR 64

Query: 330 QLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVN 389
            + T       K+WDI      S                                     
Sbjct: 65  HVYTGG-KGCVKVWDISHPGNKSP------------------------------------ 87

Query: 390 NPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN 449
                       +  I +  L PD  T+  G     ++ W+                   
Sbjct: 88  ---VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPAC 144

Query: 450 GMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQIS-- 507
              A       C    +   + +          +      G    + +     +      
Sbjct: 145 YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204

Query: 508 ------IVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL 561
                  +  G ++       +  S+        +AVG   S V +  +N          
Sbjct: 205 NTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD--KYQLH 262

Query: 562 DHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSA 621
            H   V    F+   ++ V++     +  +R P        +    S+ V     S D  
Sbjct: 263 LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISVDDK 319

Query: 622 LVASGSLDTTIIIWSL 637
            + +GS D    ++ +
Sbjct: 320 YIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (188), Expect = 8e-16
 Identities = 42/296 (14%), Positives = 83/296 (28%), Gaps = 24/296 (8%)

Query: 400 GHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDR----VQGAGHGNQINGMK--A 453
            H + + A+ +S     V+TG   G +  W+     N      +      N I   K   
Sbjct: 49  NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107

Query: 454 TGELLYTCG--------IDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQ 505
            G  L   G                  +    S P     +      +  +      +  
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167

Query: 506 ISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLG 565
             +                S I + ++   +  GG D+ V  ++L         + D   
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR--QLQQHDFTS 225

Query: 566 PVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVAS 625
            +    + P+ E+L        V +  V         +   H + V  + ++       S
Sbjct: 226 QIFSLGYCPTGEWLAVGMESSNVEVLHVNKP---DKYQLHLHESCVLSLKFAYCGKWFVS 282

Query: 626 GSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEI 680
              D  +  W     A    I  +   S +       D+  +V+   D    ++E+
Sbjct: 283 TGKDNLLNAWRTPYGAS---IFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.9 bits (177), Expect = 2e-14
 Identities = 54/368 (14%), Positives = 100/368 (27%), Gaps = 44/368 (11%)

Query: 229 SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFA 288
           SKP  S         + +    D  I        +   T   H   V AV  S    H  
Sbjct: 9   SKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLN-HGEVVCAVTISNPTRHVY 67

Query: 289 SAGFDGKVFLYD---GASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI 345
           + G  G V ++D     +   VS+L        + +    PDG  L+      T  +WD+
Sbjct: 68  TGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126

Query: 346 ETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPI 405
              +   +  + +         +     +     S     +   +  T +R  +GH    
Sbjct: 127 AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA 186

Query: 406 TALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDD 465
           + + +S D   ++TG  D                         +     G  L       
Sbjct: 187 SCIDISNDGTKLWTGGLD---------------------NTVRSWDLREGRQLQQHDFTS 225

Query: 466 TIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPS 525
            I  +               S                  ++  V    K      +    
Sbjct: 226 QIFSLGYCPTGEWLAVGMESSNV----------------EVLHVNKPDKYQLHLHESCVL 269

Query: 526 SISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAH 585
           S+   +        G D+ ++ +       +   +      V  C  S  ++Y+V     
Sbjct: 270 SLKFAYCGKWFVSTGKDNLLNAWRT--PYGASIFQSKESSSVLSCDISVDDKYIVTGSGD 327

Query: 586 RKVVLYRV 593
           +K  +Y V
Sbjct: 328 KKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (159), Expect = 3e-12
 Identities = 41/292 (14%), Positives = 92/292 (31%), Gaps = 11/292 (3%)

Query: 185 GGPIKDIAWSPDNQRMVVVGEGRERFGHV--FMSETGTSVGEISGQSKPINSCDFKPSRP 242
           G  +  +  S   + +   G+G  +   +    +++  S  +   +   I SC   P   
Sbjct: 51  GEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC 110

Query: 243 FRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGA 302
             +I G E +T+++++      ++  +  S        + S              +    
Sbjct: 111 T-LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169

Query: 303 SADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVED 362
             +         H  G   +    DGT+L T   D T + WD+     + +    +Q+  
Sbjct: 170 LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI-- 227

Query: 363 QQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSH 422
             +     G++L     S  +  L VN P      +  H   + +L  +       +   
Sbjct: 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL--HESCVLSLKFAYCGKWFVSTGK 285

Query: 423 DGFITRWNAKTGENDRVQGAGHGNQINGMK--ATGELLYTCGIDDTIKQVDL 472
           D  +  W    G    +  +   + +         + + T   D      ++
Sbjct: 286 DNLLNAWRTPYGA--SIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (115), Expect = 1e-06
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 15/119 (12%)

Query: 53  DPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIW 112
            P G+       +S +     N         H   V   K++  G +  S      +  W
Sbjct: 233 CPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW 292

Query: 113 DTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTV 171
            T     I +++                 +S+ +  +     YI +G    K  +++ +
Sbjct: 293 RTPYGASIFQSKES---------------SSVLSCDISVDDKYIVTGSGDKKATVYEVI 336

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 78.8 bits (192), Expect = 3e-16
 Identities = 40/374 (10%), Positives = 107/374 (28%), Gaps = 27/374 (7%)

Query: 265 KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW 324
           + T + H   V         ++  +   D  + +YD  +   + +L    H GGV+A+ +
Sbjct: 5   RTTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQL--SGHDGGVWALKY 61

Query: 325 KPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFIS 384
              G  +  ++          +           + V    +       Y++T S    + 
Sbjct: 62  AHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 121

Query: 385 YLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGH 444
              +   S+     + H+ P+       +   V                          H
Sbjct: 122 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG---------------------H 160

Query: 445 GNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSG-PEVKLGSQPRGLDIDENTLVTVTV 503
              +  +   G ++ +   D+T+   D++                  +   E        
Sbjct: 161 MASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISAS 220

Query: 504 KQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDH 563
              +I     +   L    +  +  +           + +        + +   +    H
Sbjct: 221 MDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYH 280

Query: 564 LGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALV 623
              ++  +    ++ ++ S +  +  +Y +   +L H       + ++  V +   + LV
Sbjct: 281 HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILK-DADQIWSVNFKGKT-LV 338

Query: 624 ASGSLDTTIIIWSL 637
           A+   D    +  L
Sbjct: 339 AAVEKDGQSFLEIL 352

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.9 bits (182), Expect = 5e-15
 Identities = 54/375 (14%), Positives = 117/375 (31%), Gaps = 31/375 (8%)

Query: 225 ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSG 284
           + G    + +C  +      +ITG++D  I V++    KF +    H   V A++Y+  G
Sbjct: 8   LRGHMTSVITC-LQFE-DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-G 64

Query: 285 SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWD 344
               S   D  V ++D                     +    +   ++T S D T  +W 
Sbjct: 65  GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124

Query: 345 IETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKP 404
           +  +S V +    +       +      ++  +            + +            
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIV---------- 174

Query: 405 ITALALSPDRGTVFTGSHDGFITRWNAKTGENDRV-QGAGHGNQINGMKATGELLYTCGI 463
                         +GS+D  +  W+    +   +  G              +   +  +
Sbjct: 175 -------------VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM 221

Query: 464 DDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDY- 522
           D TI+  DL +           +    L + +  LV+          +    S     + 
Sbjct: 222 DTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHH 281

Query: 523 -EPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVA 581
              S+I+  +    + V G++++ +IY L +  L     L     +   +F      + A
Sbjct: 282 TNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAA 340

Query: 582 SDAHRKVVLYRVPDF 596
            +   +  L  + DF
Sbjct: 341 VEKDGQSFL-EILDF 354

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.2 bits (180), Expect = 7e-15
 Identities = 46/367 (12%), Positives = 101/367 (27%), Gaps = 30/367 (8%)

Query: 315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCL--WQGD 372
           H   V     + +   ++T + DK  +++D   K  + +        D  V  L    G 
Sbjct: 11  HMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQL----SGHDGGVWALKYAHGG 65

Query: 373 YLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFT-GSHDGFITRWNA 431
            L++ S    +   D+            ++       +          GS D  +  W  
Sbjct: 66  ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 125

Query: 432 KTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGL 491
               +    G  H   +                       +         V+  S    +
Sbjct: 126 PKESSVPDHGEEHDYPL------------VFHTPEENPYFVGVLRGHMASVRTVSGHGNI 173

Query: 492 DIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELN 551
            +  +   T+ V  ++ ++    +S        +    + +         D+ + I++L 
Sbjct: 174 VVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKR--CISASMDTTIRIWDLE 231

Query: 552 NKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKV 611
           N  L    +                    A  + R               K    H+   
Sbjct: 232 NGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDY------SRKFSYHHTNLS 285

Query: 612 NCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQ 671
               +     ++ SGS +    I++L S  K +         QI  + +    L+ +V +
Sbjct: 286 AITTFYVSDNILVSGS-ENQFNIYNLRS-GKLVHANILKDADQIWSVNFKGKTLVAAVEK 343

Query: 672 DCNTKIW 678
           D  + + 
Sbjct: 344 DGQSFLE 350

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 68.4 bits (165), Expect = 6e-13
 Identities = 42/328 (12%), Positives = 100/328 (30%), Gaps = 18/328 (5%)

Query: 155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF 214
           Y+ +G     +R++D++NK+ +L+   H   G +  + ++      +V G          
Sbjct: 25  YVITGADDKMIRVYDSINKKFLLQLSGH--DGGVWALKYAHGGI--LVSGSTDRTVRVWD 80

Query: 215 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF 274
           + +   +       S        +      I+TGS DNT+ V++ P         E   +
Sbjct: 81  IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 140

Query: 275 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA 334
                      +F          +   +    +   G+  +   V+ VA       L   
Sbjct: 141 PLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 200

Query: 335 SGDKTCKLWDIETKSVVSEFI-------------MGNQVEDQQVSCLWQGDYLLTVSLSG 381
           +      ++D E K  +S  +             +   ++               +  + 
Sbjct: 201 TDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAA 260

Query: 382 FISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQG 441
               +   + +   R    H+  ++A+        +     +     +N ++G+      
Sbjct: 261 ADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANI 320

Query: 442 AGHGNQINGMKATGE-LLYTCGIDDTIK 468
               +QI  +   G+ L+     D    
Sbjct: 321 LKDADQIWSVNFKGKTLVAAVEKDGQSF 348

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.4 bits (126), Expect = 5e-08
 Identities = 14/118 (11%), Positives = 43/118 (36%), Gaps = 3/118 (2%)

Query: 563 HLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL 622
           H+  V  C     + Y++     + + +Y   + +     +   H   V  + ++    L
Sbjct: 11  HMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLL--QLSGHDGGVWALKYAHGGIL 67

Query: 623 VASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEI 680
           V+  +  T  +         H+   +      +  +++ +   +V+  +D    +W++
Sbjct: 68  VSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 125

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 78.3 bits (191), Expect = 3e-16
 Identities = 25/355 (7%), Positives = 67/355 (18%), Gaps = 48/355 (13%)

Query: 286 HFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL-TASGDKTCKLWD 344
           +  +     K+ + D     +   +               P G     T +  ++    D
Sbjct: 3   YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKID 62

Query: 345 IETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKP 404
           + T   +    +    E                                         K 
Sbjct: 63  LVTGETLGRIDLSTPEE---------------------------------------RVKS 83

Query: 405 ITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGID 464
           +   ALSPD  T+        +   + +                         +      
Sbjct: 84  LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWA 143

Query: 465 DTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEP 524
               ++          + + G+      I               V               
Sbjct: 144 RDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWE---AETYAQPDVLAVWNQHESSGVMAT 200

Query: 525 SSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDA 584
              +   +          + +   +L    ++ +            + +P+      +  
Sbjct: 201 PFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYN 260

Query: 585 HRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLAS 639
              +  + +                    V  S D + V  G     +  +   +
Sbjct: 261 V--LESFDLEKNASIKRVP---LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 76.8 bits (187), Expect = 9e-16
 Identities = 40/354 (11%), Positives = 92/354 (25%), Gaps = 36/354 (10%)

Query: 99  YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYI-A 157
           YI +     K+ + DT              G             +    +V   G    A
Sbjct: 3   YILAPARPDKLVVIDTEKMAVDKVITIADAGP------------TPMVPMVAPGGRIAYA 50

Query: 158 SGDISGKVRIWDTVNKEHILKNEFHP---IGGPIKDIAWSPDNQRMVVVGEGRERFGHVF 214
           + + S  +   D V  E + + +          +   A SPD + + +           F
Sbjct: 51  TVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHF 110

Query: 215 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF 274
             +        +       + +    R   ++  + D +     G        +      
Sbjct: 111 EVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVE 168

Query: 275 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA 334
            + ++   + ++                           +          + D       
Sbjct: 169 DKPIQSWEAETYAQPDVLAVWNQ-------------HESSGVMATPFYTARKDIDPADPT 215

Query: 335 SGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTP 394
           +        D+ET  +    +    V     +                +   D+   ++ 
Sbjct: 216 AYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA--FGAYNVLESFDLEKNASI 273

Query: 395 IRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGEN-DRVQGAGHGNQ 447
            RV         ++ +S D  TV+ G   G +  ++A+T E   +V   G+ + 
Sbjct: 274 KRV--PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASM 325

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 72.1 bits (175), Expect = 3e-14
 Identities = 36/325 (11%), Positives = 91/325 (28%), Gaps = 35/325 (10%)

Query: 57  KNFLYTNG--NSVIIRNIENPAISDIYT--EHSCAVNVAKYSPSGFYI-ASGDISGKVRI 111
           ++++      + +++ + E  A+  + T  +      V   +P G    A+ + S  +  
Sbjct: 1   RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60

Query: 112 WDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTV 171
            D V  E + + +       +K +         + + +      +       +       
Sbjct: 61  IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120

Query: 172 NKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKP 231
           + E + + +       I  +AW+ D  ++  +G       HV   E GT V +   QS  
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDL----HVMDPEAGTLVEDKPIQSWE 176

Query: 232 INSCDFKPSRPF----------------------RIITGSEDNTIAVFEGPPFKFKMTKQ 269
             +                                    +    +   +    +  M + 
Sbjct: 177 AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREV 236

Query: 270 EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGT 329
                      + + +   + G    +  +D      +  +         Y+V    DG+
Sbjct: 237 RIMDVFY-FSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVP---LPHSYYSVNVSTDGS 292

Query: 330 QLLTASGDKTCKLWDIETKSVVSEF 354
            +           +D ET     + 
Sbjct: 293 TVWLGGALGDLAAYDAETLEKKGQV 317

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.8 bits (187), Expect = 2e-15
 Identities = 60/387 (15%), Positives = 113/387 (29%), Gaps = 63/387 (16%)

Query: 84  HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTS 143
           H   +       S     SGD  G +++WD    ++    +       +   G       
Sbjct: 13  HDADIFSVSACNSFTVSCSGD--GYLKVWDNKLLDNENPKD-KSYSHFVHKSGLHHVDVL 69

Query: 144 IRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPI--------GGPIKDIAWSP 195
                       +A+   SG +  +    ++   K  F  +              + W  
Sbjct: 70  QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 129

Query: 196 D-----NQRMVVVGE----------------GRERFGHVFMSETGTSVGEISGQSKPINS 234
                 + R+V                               E   +V      S+   S
Sbjct: 130 SNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATS 189

Query: 235 CDFKPSRPFRIITGSEDNTIAVFE------GPPFKFKMTKQEHSRFVQAVRYSPSGSHFA 288
            D        I TG  + T+ + E         F+ + +   +S  +++V++SP GS  A
Sbjct: 190 VDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLA 247

Query: 289 SAGFDGKVFLY--------------DGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA 334
            A                          +    + LG  AH   V ++++   G  L +A
Sbjct: 248 IAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA 307

Query: 335 SGDKTCKLWDIETKSVVSEFIM-GNQVEDQQVSCLW--QGDYLLTVSLSGFISYLDVNNP 391
             D   + WD++TK  ++   M  + +E ++        GD L    +       DV   
Sbjct: 308 GWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGV------FDVKFL 361

Query: 392 STPIRVIKGHNKPITALALSPDRGTVF 418
               R   G +   +   +  DR   +
Sbjct: 362 KKGWRSGMGADLNESLCCVCLDRSIRW 388

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 73.0 bits (177), Expect = 2e-14
 Identities = 46/403 (11%), Positives = 101/403 (25%), Gaps = 57/403 (14%)

Query: 314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCL----- 368
           AH   +++V+        ++ SGD   K+WD +     +           +         
Sbjct: 12  AHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69

Query: 369 -------WQGDYLLTVSLSGFISYLDVNNP---------STPIRVIKGHNKPITALALSP 412
                  ++   + T S SG + +  +               +           AL    
Sbjct: 70  QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 129

Query: 413 D-----RGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTI 467
                    +      G    W      ++      + +    ++ T E   T       
Sbjct: 130 SNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS--QFA 187

Query: 468 KQVDLSSNAY-----SGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDY 522
             VD+S         +   V++        +         +   + + +        +  
Sbjct: 188 TSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLA 247

Query: 523 EPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVAS 582
                +      L      +    +    + S +   E  H   V   SF+ S E L ++
Sbjct: 248 IAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA 307

Query: 583 DAHRKVVLYRVPDFELAHNKEWGFHSAKV----NCVAWSPDSALVASGSLDTTIIIWSLA 638
               K+  + V   E         H   +    + +A       +A         ++ + 
Sbjct: 308 GWDGKLRFWDVKTKERITTLNM--HCDDIEIEEDILAVDEHGDSLAEPG------VFDVK 359

Query: 639 SPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIA 681
              K                    N+ L  V  D + + +  A
Sbjct: 360 FLKKGWRSGMGAD----------LNESLCCVCLDRSIRWFREA 392

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.5 bits (142), Expect = 5e-10
 Identities = 23/243 (9%), Positives = 69/243 (28%), Gaps = 37/243 (15%)

Query: 393 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMK 452
                 K H+  I +++         + S DG++  W+ K  +N+  +   + + ++   
Sbjct: 5   ATANAGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSG 62

Query: 453 ATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENG 512
                +      D  +   +++ ++SG ++      R  +  +     + +    + ++ 
Sbjct: 63  LHHVDVLQAIERDAFELCLVATTSFSG-DLLFYRITREDETKKVIFEKLDLLDSDMKKHS 121

Query: 513 AKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSF 572
                     +            +         +I++ +  +    +   +  P  +   
Sbjct: 122 FWALKWGASNDR------LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQG 175

Query: 573 SPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTI 632
           +                                  S     V  S    L+A+G  + T+
Sbjct: 176 TVE---------------------------SPMTPSQFATSVDISERG-LIATGFNNGTV 207

Query: 633 IIW 635
            I 
Sbjct: 208 QIS 210

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (182), Expect = 2e-15
 Identities = 52/294 (17%), Positives = 98/294 (33%), Gaps = 43/294 (14%)

Query: 82  TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE--HILKNEFHPIGGPIKDIGTLL 139
           +E S  V           I SG     ++IWD    E   IL      +     D   ++
Sbjct: 12  SETSKGVY--CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVII 69

Query: 140 SLTSIRNILVLSIGFYIASGDIS----------------------GKVRIWDTVNKEHIL 177
           + +S   + V  +        +                         + +WD  +   I 
Sbjct: 70  TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 129

Query: 178 KNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDF 237
                      +      D     +V    +R   V+ + T   V  ++G  + I    +
Sbjct: 130 LRRVLVGH---RAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 186

Query: 238 KPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVF 297
              R   +++GS DNTI +++          + H   V+ +R+        S  +DGK+ 
Sbjct: 187 ---RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIK 241

Query: 298 LYDGASADLVSELGNP-------AHKGGVYAVAWKPDGTQLLTASGDKTCKLWD 344
           ++D  +A                 H G V+ + +  D  Q++++S D T  +WD
Sbjct: 242 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (176), Expect = 2e-14
 Identities = 40/286 (13%), Positives = 84/286 (29%), Gaps = 25/286 (8%)

Query: 153 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH 212
              I SG     ++IWD    E       H                  V++    +    
Sbjct: 25  DQKIVSGLRDNTIKIWDKNTLECKRILTGH------TGSVLCLQYDERVIITGSSDSTVR 78

Query: 213 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHS 272
           V+   TG  +  +    + +    F                  +        +     H 
Sbjct: 79  VWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 138

Query: 273 RFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL 332
             V  V +       AS   D  + +++ ++ + V  L              +     ++
Sbjct: 139 AAVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKR----GIACLQYRDRLVV 192

Query: 333 TASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN-- 390
           + S D T +LWDIE  + +       ++        +    +++ +  G I   D+    
Sbjct: 193 SGSSDNTIRLWDIECGACLRVLEGHEELVRC---IRFDNKRIVSGAYDGKIKVWDLVAAL 249

Query: 391 ------PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 430
                  +  +R +  H+  +  L     +  + + SHD  I  W+
Sbjct: 250 DPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (154), Expect = 1e-11
 Identities = 46/328 (14%), Positives = 96/328 (29%), Gaps = 56/328 (17%)

Query: 315 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL 374
              GVY + +  D  ++++   D T K+WD  T                 V CL   + +
Sbjct: 14  TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRIL----TGHTGSVLCLQYDERV 67

Query: 375 LTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTG 434
           +    S     +   N    +  +  H + +  L  +       +      +    + T 
Sbjct: 68  IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD 127

Query: 435 ENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDID 494
              R    GH   +N +    + + +   D TIK  + S+                    
Sbjct: 128 ITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTC------------------- 168

Query: 495 ENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKS 554
                              +       ++     L +   LV  G +D+ + ++++   +
Sbjct: 169 -------------------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA 209

Query: 555 LSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGF-------H 607
                E               N+ +V+     K+ ++ +                    H
Sbjct: 210 CLRVLEGHE---ELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH 266

Query: 608 SAKVNCVAWSPDSALVASGSLDTTIIIW 635
           S +V  + +      + S S D TI+IW
Sbjct: 267 SGRVFRLQFDEF--QIVSSSHDDTILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (144), Expect = 2e-10
 Identities = 43/297 (14%), Positives = 94/297 (31%), Gaps = 23/297 (7%)

Query: 395 IRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT 454
           I      +K +  L    D   + +G  D  I  W+  T E  R+   GH   +  ++  
Sbjct: 8   IHCRSETSKGVYCL--QYDDQKIVSGLRDNTIKIWDKNTLECKRIL-TGHTGSVLCLQYD 64

Query: 455 GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAK 514
             ++ T   D T++  D+++       +        L  +   +VT +  +   V + A 
Sbjct: 65  ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMAS 124

Query: 515 VSSLPIDY-----EPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTD 569
            + + +         +   +D +   +     D  + ++  +           H   +  
Sbjct: 125 PTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIAC 183

Query: 570 CSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLD 629
             +      +V+  +   + L+ +         E      +            + SG+ D
Sbjct: 184 LQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK----RIVSGAYD 237

Query: 630 TTIIIWSLASPAKHIIIKNAHP-------QSQITRLQWLDNDLLVSVGQDCNTKIWE 679
             I +W L +                     ++ RLQ+ D   +VS   D    IW+
Sbjct: 238 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (124), Expect = 5e-08
 Identities = 41/295 (13%), Positives = 82/295 (27%), Gaps = 21/295 (7%)

Query: 266 MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWK 325
             + E S+ V  +          S   D  + ++D  + +    L    H G V  + + 
Sbjct: 9   HCRSETSKGVYCL--QYDDQKIVSGLRDNTIKIWDKNTLECKRIL--TGHTGSVLCLQYD 64

Query: 326 PDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY 385
                        +     +   +            +  +   +    ++T S    I+ 
Sbjct: 65  ER-----VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV 119

Query: 386 LDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHG 445
            D+ +P+                 +  D   + + S D  I  WN  T E  R    GH 
Sbjct: 120 WDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL-NGHK 178

Query: 446 NQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQ 505
             I  ++    L+ +   D+TI+  D+   A            R +  D   +V+     
Sbjct: 179 RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDG 238

Query: 506 ISIVENGAKVSSLPIDYEPSSISLDHEH-----------GLVAVGGADSKVHIYE 549
              V +               +    EH             +     D  + I++
Sbjct: 239 KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (105), Expect = 1e-05
 Identities = 24/179 (13%), Positives = 44/179 (24%), Gaps = 56/179 (31%)

Query: 80  IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLL 139
           + T +     +A        + SG     +R+WD      +   E H             
Sbjct: 171 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---- 226

Query: 140 SLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQR 199
                           I SG   GK+++WD V                            
Sbjct: 227 ------------DNKRIVSGAYDGKIKVWDLVAALDPRA--------------------- 253

Query: 200 MVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFE 258
                                 +  +   S  +    F      +I++ S D+TI +++
Sbjct: 254 ----------------PAGTLCLRTLVEHSGRVFRLQFDEF---QIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (87), Expect = 0.002
 Identities = 22/128 (17%), Positives = 36/128 (28%), Gaps = 7/128 (5%)

Query: 42  TQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIA 101
           T  G    +         + +  +   IR  +    + +         V         I 
Sbjct: 173 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIV 232

Query: 102 SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI 161
           SG   GK+++WD V                   + TL+  +     L     F I S   
Sbjct: 233 SGAYDGKIKVWDLVAALDPRAPA------GTLCLRTLVEHSGRVFRLQFD-EFQIVSSSH 285

Query: 162 SGKVRIWD 169
              + IWD
Sbjct: 286 DDTILIWD 293

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.5 bits (181), Expect = 5e-15
 Identities = 35/350 (10%), Positives = 87/350 (24%), Gaps = 35/350 (10%)

Query: 267 TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL-GNPAHKGGVYAVAWK 325
            +Q    ++  ++  PS S      +DG + +Y         +L  +  +K  +    + 
Sbjct: 6   IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65

Query: 326 PDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY 385
            +    +     +   L      S   + +  N+           GD  L  +    +  
Sbjct: 66  DNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIE 125

Query: 386 LDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS------HDGFITRWNAKTGENDRV 439
           +          +   +         +         S      ++  +  +     E+D  
Sbjct: 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG 185

Query: 440 QGAGHGNQING-----MKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDID 494
                G +        +    E      ID  +                          D
Sbjct: 186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF---------------------D 224

Query: 495 ENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKS 554
           +      + K+ +   +   +    + Y  +SI     H  +   G+D  +  + L  + 
Sbjct: 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR- 283

Query: 555 LSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEW 604
                        +    + S+  L  + +          D  +  N   
Sbjct: 284 -KKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNASS 332

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 73.0 bits (177), Expect = 2e-14
 Identities = 36/328 (10%), Positives = 96/328 (29%), Gaps = 21/328 (6%)

Query: 314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDY 373
           A K  +  +   P  + LL  S D +  ++  + ++   + +   + +   + C +  + 
Sbjct: 9   APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT 68

Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
            L + +      +   +           N           +          +        
Sbjct: 69  DLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVID 128

Query: 434 GENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDI 493
             N         N  +        ++T   + +   V ++++           Q +   +
Sbjct: 129 PRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNS-----------QVQWFRL 177

Query: 494 DENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNK 553
                   T+++  +      V+ LP +      +     G VAV   D +   Y  + +
Sbjct: 178 PLCEDDNGTIEESGLKYQIRDVALLPKE--QEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235

Query: 554 SLSPKAEL-----DHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHS 608
                  L     +   PV    FSP +++L  + +   +  + +   +   N       
Sbjct: 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA---KF 292

Query: 609 AKVNCVAWSPDSALVASGSLDTTIIIWS 636
            + + V  +    ++   + D T    +
Sbjct: 293 NEDSVVKIACSDNILCLATSDDTFKTNA 320

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 69.1 bits (167), Expect = 3e-13
 Identities = 32/335 (9%), Positives = 88/335 (26%), Gaps = 39/335 (11%)

Query: 143 SIRNILVLSIGFYIASGDISGKVRIWDT-VNKEHILKNEFHPIGGPIKDIAWSPDNQRMV 201
            I +I ++     +      G + ++   +  +++   +      P+    +  +    +
Sbjct: 13  YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQI 72

Query: 202 VVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPP 261
            VG   +            S   ++     +  C        ++I  S D  I V +   
Sbjct: 73  YVG-TVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRN 131

Query: 262 FKFKMTKQEHSRFVQAVRYSPS------GSHFASAGFDGKVFLYDGASADLVSELGN--P 313
           +   +   ++         +         S       + +V  +     +  +       
Sbjct: 132 YGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESG 191

Query: 314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDY 373
                        +      +S D    +   + +               +++       
Sbjct: 192 LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN-- 249

Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 433
                                         P+ ++  SP    ++T   DG I+ WN +T
Sbjct: 250 ---------------------------LAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282

Query: 434 GENDRVQGAGHGNQINGMKATGELLYTCGIDDTIK 468
            +  +     + + +  +  +  +L     DDT K
Sbjct: 283 RKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFK 317

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.0 bits (159), Expect = 3e-12
 Identities = 28/314 (8%), Positives = 71/314 (22%), Gaps = 21/314 (6%)

Query: 84  HSCAVNVAKYSPSGFYIASGDISGKVRIWDT-VNKEHILKNEFHPIGGPIKDIGTLLSLT 142
               ++  K  PS   +      G + ++   +  +++   +      P+          
Sbjct: 10  PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC-----NF 64

Query: 143 SIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVV 202
                L + +G           +         +   N          D      +   ++
Sbjct: 65  IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLI 124

Query: 203 VGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF 262
                  +G   ++    +      ++K              +                 
Sbjct: 125 EVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN 184

Query: 263 KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLV-------------SE 309
                     +             +A +  DG+V +                        
Sbjct: 185 GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244

Query: 310 LGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW 369
           L +      V ++ + P    L TA  D     W+++T+  +  F   N+     V    
Sbjct: 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNED--SVVKIAC 302

Query: 370 QGDYLLTVSLSGFI 383
             + L   +     
Sbjct: 303 SDNILCLATSDDTF 316

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.6 bits (150), Expect = 4e-11
 Identities = 38/320 (11%), Positives = 86/320 (26%), Gaps = 36/320 (11%)

Query: 395 IRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDR--VQGAGHGNQINGM- 451
           +++ +     I+ + + P +  +   S DG +T +       +   +Q   + + +    
Sbjct: 4   VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63

Query: 452 --KATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIV 509
               T   +Y   +   I +VDL  +          +      I +     +       +
Sbjct: 64  FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGL 123

Query: 510 ENGAKVSSLPIDYEPSSISLDHEH-------------GLVAVGGADSKVHIYELNNKSLS 556
                  +             +                 + VG  +S+V  + L      
Sbjct: 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDD 183

Query: 557 PKAELDH---LGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGF------- 606
                +                 E    S    +V +    D    +N    F       
Sbjct: 184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL 243

Query: 607 ------HSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQW 660
                  +  VN + +SP    + +   D  I  W+L +  K       +  S + ++  
Sbjct: 244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDS-VVKIAC 302

Query: 661 LDNDLLVSVGQDCNTKIWEI 680
             +++L     D   K    
Sbjct: 303 -SDNILCLATSDDTFKTNAA 321

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 72.9 bits (177), Expect = 2e-14
 Identities = 35/334 (10%), Positives = 77/334 (23%), Gaps = 29/334 (8%)

Query: 322 VAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLL-TVSLS 380
            A K     ++  +      + D+ + +V    +M ++                   +  
Sbjct: 2   PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61

Query: 381 GFISYLDVNNPSTPIRVIKG-----HNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE 435
           G I  +D++                  + + + A+SPD   V+   +       +     
Sbjct: 62  GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY---- 117

Query: 436 NDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDE 495
                            A G            +QV L   A  G     G     +D+  
Sbjct: 118 -----VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKT 172

Query: 496 NTLVTVTVKQISIVENGAKVSSLPIDYEPS----------SISLDHEHGLVAVGGADSKV 545
                    +    +  +    L      S                +    A        
Sbjct: 173 GKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 232

Query: 546 HIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWG 605
              +L       +   D          SP +          ++  Y +   +L       
Sbjct: 233 LSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGVLNRLAKYDLKQRKLIKAAN-- 289

Query: 606 FHSAKVNCVAWSPDSALVASGSLDTTIIIWSLAS 639
                  CVA+      +  G     + +++  +
Sbjct: 290 -LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 322

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 70.2 bits (170), Expect = 1e-13
 Identities = 37/344 (10%), Positives = 77/344 (22%), Gaps = 50/344 (14%)

Query: 191 IAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS-GQSKPINSCDFKPSRPFRIITGS 249
            A    ++ M+V         HV    + T              +    P      +  +
Sbjct: 2   PALKAGHEYMIVTNYPNNL--HVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN 59

Query: 250 EDNTIAVFEGPPFKFKM------TKQEHSRFVQAVRYSPSGSHFASAGFD---------- 293
               I   +    K            E  R + +   SP G    +              
Sbjct: 60  HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVV 119

Query: 294 --GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVV 351
              ++ ++  A       +        VY +    DG+  +           D++T    
Sbjct: 120 KPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGP---DIYKMDVKTGKYT 176

Query: 352 SEFIMGNQVEDQQVSCLWQGDY------------------------LLTVSLSGFISYLD 387
               + N       +      +                          T  L      +D
Sbjct: 177 VALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 236

Query: 388 VNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQ 447
           +    T  +      +       SP       G     + +++ K  +  +     H   
Sbjct: 237 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHTYY 295

Query: 448 INGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGL 491
                  G+ LY  G  + +   +  +       +KL       
Sbjct: 296 CVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVK-NIKLPGGDMST 338

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 68.6 bits (166), Expect = 5e-13
 Identities = 36/348 (10%), Positives = 86/348 (24%), Gaps = 34/348 (9%)

Query: 94  SPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIG 153
                Y+   +    + + D  +             GP                ++    
Sbjct: 5   KAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGP-------------GTAMMAPDN 51

Query: 154 FYI-ASGDISGKVRIWDT----VNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE 208
                  +  G +   D           L +    +G  +   A SPD + +       +
Sbjct: 52  RTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQ 111

Query: 209 RFGHVFMSETG-TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT 267
           R    ++ +     V   +   +      F   R   ++  ++D ++ V     +K  + 
Sbjct: 112 RLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVK 171

Query: 268 KQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPD 327
             +++  +  +R      + A                    +              +K D
Sbjct: 172 TGKYTVALP-LRNWNRKGYSAPDVLY-----------FWPHQSPRHEFSMLYTIARFKDD 219

Query: 328 GTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLD 387
                TA         D++T    ++    +  E          D      +   ++  D
Sbjct: 220 KQDPATADLLYGYLSVDLKTGKTHTQ-EFADLTELYFTGLRSPKDPNQIYGVLNRLAKYD 278

Query: 388 VNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE 435
           +            H      +A       ++ G     +  +N  T E
Sbjct: 279 LKQRKLIKAANLDH--TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 324

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 66.7 bits (161), Expect = 2e-12
 Identities = 24/327 (7%), Positives = 72/327 (22%), Gaps = 32/327 (9%)

Query: 56  GKNFLYTNG--NSVIIRNIENPA-ISDIYTEHSCAVNVAKYSPSGFYI-ASGDISGKVRI 111
           G  ++      N++ + ++ +                 A  +P         +  G +  
Sbjct: 7   GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYG 66

Query: 112 WDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS----IGFYIASGDISGKVRI 167
            D    ++        + G +       +++     +  +                ++ +
Sbjct: 67  IDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEV 126

Query: 168 WDTVNKEHILKNEFHPIGGPIKDIAWSPDNQ-------------------RMVVVGEGRE 208
           + T +          P+   +  +  + D                       + +     
Sbjct: 127 FSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNR 186

Query: 209 RFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM-T 267
           +                  +   + +            T          +    K     
Sbjct: 187 KGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQE 246

Query: 268 KQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPD 327
             + +        SP   +        ++  YD     L+            Y VA+   
Sbjct: 247 FADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAAN---LDHTYYCVAFDKK 302

Query: 328 GTQLLTASGDKTCKLWDIETKSVVSEF 354
           G +L          +++ +T   V   
Sbjct: 303 GDKLYLGGTFNDLAVFNPDTLEKVKNI 329

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 40.9 bits (94), Expect = 4e-04
 Identities = 33/298 (11%), Positives = 78/298 (26%), Gaps = 14/298 (4%)

Query: 32  NKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVA 91
           N+  +           I L       +   ++    + R++ + AIS    E    V   
Sbjct: 51  NRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE----VYAT 106

Query: 92  KYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDI-----GTLLSLTSIRN 146
                           ++ ++ T +          P+   +  +     G+L        
Sbjct: 107 VNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIY 166

Query: 147 ILVLSIGFYIASGDISGKVR--IWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVG 204
            + +  G Y  +  +    R                       +  IA   D+++     
Sbjct: 167 KMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA 226

Query: 205 EGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF 264
           +    +  V +    T   E +  ++   +    P  P +I      N +A ++    K 
Sbjct: 227 DLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKL 284

Query: 265 KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAV 322
                        V +   G      G    + +++  + + V  +  P         
Sbjct: 285 IKA-ANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTP 341

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 61.7 bits (148), Expect = 1e-10
 Identities = 38/333 (11%), Positives = 83/333 (24%), Gaps = 45/333 (13%)

Query: 156 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGH--- 212
            A      +  + D      I   +   +         + D   +        R      
Sbjct: 21  PAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN----PVVADDGSFIAHASTVFSRIARGER 76

Query: 213 -----VFMSETGTSVGEISGQSKPINSCDFKP--------SRPFRIITGSEDNTIAVFEG 259
                VF   T     +I     P       P         +       S    + V + 
Sbjct: 77  TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDL 136

Query: 260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVS-ELGNPAHKGG 318
               FK        +        +       G   KV      + ++   E+ +P  +  
Sbjct: 137 EGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFL 196

Query: 319 VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIM-GNQVEDQQVSCLWQGDYLLTV 377
           +   A+     +L+  +        D+ +        +      ++       G   +  
Sbjct: 197 INHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAY 256

Query: 378 SLSGFISYLDVNNPS-------------------TPIRVIKGHNKPITALALSPDRGTVF 418
             +    YL V+                        +   +  ++   ++ +S D   + 
Sbjct: 257 HRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEI-DSINVSQDEKPLL 315

Query: 419 --TGSHDGFITRWNAKTGEN-DRVQGAGHGNQI 448
               + D  +   +A++GE    V   GHG Q+
Sbjct: 316 YALSTGDKTLYIHDAESGEELRSVNQLGHGPQV 348

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 55.2 bits (131), Expect = 1e-08
 Identities = 41/356 (11%), Positives = 86/356 (24%), Gaps = 56/356 (15%)

Query: 275 VQAVRYSPSGSHF-----ASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGT 329
                 +P          A      + F+ DG +  ++  +      G +       DG+
Sbjct: 4   RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMI----DGGFLPNPVVADDGS 59

Query: 330 QLLTAS----------GDKTCKLWDIETKSVVSEFIMGNQVEDQ------QVSCLWQGDY 373
            +  AS               +++D  T    ++  + +             S    G  
Sbjct: 60  FIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKT 119

Query: 374 LLTVSLSGFISYLDVNNPS--------TPIRVIKGHNKPITALALSPDRGTVFTGS-HDG 424
           LL    S   +   V+            P         P T      D          +G
Sbjct: 120 LLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEG 179

Query: 425 FITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKL 484
                + +    +      H             L        I Q+DLSS          
Sbjct: 180 TPEITHTEVFHPEDEFLINHPAYSQK----AGRLVWPTYTGKIHQIDLSSGDAK------ 229

Query: 485 GSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSK 544
                   +     +T   +       G +  +     +   + +D          +   
Sbjct: 230 -------FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR-- 280

Query: 545 VHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYL--VASDAHRKVVLYRVPDFEL 598
             +  L+ K+    A+ +    +   + S   + L    S   + + ++     E 
Sbjct: 281 -FVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE 335

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 54.0 bits (128), Expect = 3e-08
 Identities = 35/288 (12%), Positives = 70/288 (24%), Gaps = 32/288 (11%)

Query: 90  VAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILV 149
           +A  S     IA G+ +  V ++D V            I  P      + +   + ++  
Sbjct: 61  IAHASTVFSRIARGERTDYVEVFDPVTLLPT-----ADIELPDAPRFLVGTYPWMTSLTP 115

Query: 150 LSIGFYIASGDISGKVRIWDTVNKEHILKNEFHP-----IGGPIKDIAWSPDNQRMVVVG 204
                       +  V + D   K      +           P        D   +  V 
Sbjct: 116 DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDG-SLAKVA 174

Query: 205 EGRERFGHVFMSETGTSVGEISGQSKP----------------INSCDFKPSRPFRIITG 248
            G E    +  +E      E                       I+  D        +   
Sbjct: 175 FGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAV 234

Query: 249 SEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVS 308
                    +G           H    +          +        V + D  + + ++
Sbjct: 235 EALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA 294

Query: 309 ELGNPAHKGGVYAVAWKPDGTQLL--TASGDKTCKLWDIETKSVVSEF 354
           +         + ++    D   LL   ++GDKT  + D E+   +   
Sbjct: 295 KF---EMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV 339

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 40.2 bits (92), Expect = 6e-04
 Identities = 18/141 (12%), Positives = 42/141 (29%), Gaps = 5/141 (3%)

Query: 90  VAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILV 149
           +   + +G        SG  +    V      +       G  + +         R  L+
Sbjct: 209 LVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVA--YHRALDRIYLL 266

Query: 150 LSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRER 209
           +           S  V + D    E +       +G  I  I  S D + ++      ++
Sbjct: 267 VDQRDEWRHKTASRFVVVLDAKTGERL---AKFEMGHEIDSINVSQDEKPLLYALSTGDK 323

Query: 210 FGHVFMSETGTSVGEISGQSK 230
             ++  +E+G  +  ++    
Sbjct: 324 TLYIHDAESGEELRSVNQLGH 344

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.8 bits (86), Expect = 0.003
 Identities = 30/287 (10%), Positives = 72/287 (25%), Gaps = 32/287 (11%)

Query: 402 NKPITALALSPDRGTVF-----TGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKAT-- 454
           ++P    A +PD   V+       +        + + G   RV G   G  +        
Sbjct: 1   DEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG---RVIGMIDGGFLPNPVVADD 57

Query: 455 GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAK 514
           G  +       +       ++     +         +++ +     V             
Sbjct: 58  GSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVG------------ 105

Query: 515 VSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSP 574
                    P   SL  +   +          +  ++ +  + K  LD          +P
Sbjct: 106 -------TYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAP 158

Query: 575 SNEYLVASDAHRKVVLYRVPDFELAHNKEWGF--HSAKVNCVAWSPDSALVASGSLDTTI 632
              ++   D     V +         + E         +N  A+S  +  +   +    I
Sbjct: 159 DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKI 218

Query: 633 IIWSLASPAKHIIIKN-AHPQSQITRLQWLDNDLLVSVGQDCNTKIW 678
               L+S     +    A  +++            V+  +  +    
Sbjct: 219 HQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYL 265

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.8 bits (86), Expect = 0.004
 Identities = 26/263 (9%), Positives = 69/263 (26%), Gaps = 22/263 (8%)

Query: 31  GNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNV 90
              ++ +  P  +          P              + ++ +          +  +  
Sbjct: 106 TYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFM-- 163

Query: 91  AKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVL 150
             +   G        +            H             +  G L+  T    I  +
Sbjct: 164 --HCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQI 221

Query: 151 SIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERF 210
            +         SG  +    V      +       G  + +A+     R+ ++ + R+ +
Sbjct: 222 DLS--------SGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEW 273

Query: 211 GH--------VFMSETGTSVGEISGQSKPINSCDFKP-SRPFRIITGSEDNTIAVFEGPP 261
            H        V  ++TG  + +       I+S +     +P      + D T+ + +   
Sbjct: 274 RHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAES 332

Query: 262 FKFKMTKQEHSRFVQAVRYSPSG 284
            +   +  +     Q +  +  G
Sbjct: 333 GEELRSVNQLGHGPQVITTADMG 355

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 61.1 bits (147), Expect = 1e-10
 Identities = 26/291 (8%), Positives = 65/291 (22%), Gaps = 42/291 (14%)

Query: 156 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKD-----IAWSPDNQRMVVVGEGRERF 210
            A G  +  V ++D V    I   E               I     +  ++    G    
Sbjct: 89  SAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSA- 147

Query: 211 GHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVF----EGPPFKFKM 266
                    +        S         P        GS   ++A               
Sbjct: 148 AAGLSVPGASDDQLTKSASCFHIH----PGAAATHYLGSCPASLAASDLAAAPAAAGIVG 203

Query: 267 TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP 326
            +   ++   +     +            +   D  +A    +     ++ G  A  ++ 
Sbjct: 204 AQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRS 263

Query: 327 DGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYL 386
            G Q++    +    +      S                            + +   S +
Sbjct: 264 AGFQMVAKLKNTDGIMILTVEHSRSCL------------------------AAAENTSSV 299

Query: 387 DVNNPSTPIRVIKGHNKPITALALSPDRGTVF--TGSHDGFITRWNAKTGE 435
             +        I  +     A+  + D  +      +    +  ++A + +
Sbjct: 300 TASVG-QTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 58.5 bits (140), Expect = 1e-09
 Identities = 27/291 (9%), Positives = 61/291 (20%), Gaps = 34/291 (11%)

Query: 90  VAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILV 149
            A  S S    A G  +  V ++D V            I  P     ++     I     
Sbjct: 79  FALASTSFARSAKGKRTDYVEVFDPVTFLP-----IADIELPDAPRFSVGPRVHIIGNCA 133

Query: 150 LSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRER 209
            S          S                     +          P       +G     
Sbjct: 134 SSACLLFFLFG-SSAAAGLSVP------GASDDQLTKSASCFHIHPGAAATHYLGSCPAS 186

Query: 210 FGHVFMSETGTSVGEISGQSKPINSCDFKPSRP----FRIITGSEDNTIAVFEGPPFKFK 265
                ++    + G +  Q     +C  + ++       +   +               K
Sbjct: 187 LAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMK 246

Query: 266 MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP------------ 313
                +    +A  +  +G    +   +    +                           
Sbjct: 247 AAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT 306

Query: 314 ----AHKGGVYAVAWKPDGTQLL--TASGDKTCKLWDIETKSVVSEFIMGN 358
               ++     A+    DG       ++G +   ++D  +    S   +  
Sbjct: 307 SGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 56.9 bits (136), Expect = 3e-09
 Identities = 25/360 (6%), Positives = 72/360 (20%), Gaps = 58/360 (16%)

Query: 157 ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMS 216
           A    + +  +        +  +    +                 +      R      +
Sbjct: 40  AYFAGTTENWVSCAGCGVTLGHSLGAFLSLA----VAGHSGSDFALASTSFARSAKGKRT 95

Query: 217 ETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQ 276
           +                         F  +T      I + + P F            V 
Sbjct: 96  DY---------------------VEVFDPVTFLPIADIELPDAPRF-------SVGPRVH 127

Query: 277 AVRYSPSGSHFASAGF-DGKVFLYDGASADLVSELGNP-----AHKGGVYAVAWKPDGTQ 330
            +    S +      F            A       +                     + 
Sbjct: 128 IIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASL 187

Query: 331 LLTASGDKTCKLWDIETKSVVSE----FIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYL 386
             +           +  +   ++               V  +        +  +G     
Sbjct: 188 AASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKA 247

Query: 387 DVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDG---------FITRWNAKTGEND 437
            ++   +  +     +     +A   +   +   + +            +   A  G+  
Sbjct: 248 AIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ-- 305

Query: 438 RVQGAGHGNQINGMKATGE---LLY-TCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDI 493
                 +G+  + + A  +     Y      + +   D +S+      V+L   P  L +
Sbjct: 306 TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS-SVELDKGPESLSV 364

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 42.7 bits (99), Expect = 1e-04
 Identities = 30/369 (8%), Positives = 82/369 (22%), Gaps = 77/369 (20%)

Query: 287 FASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIE 346
            A      + ++        +           +        G+    AS           
Sbjct: 39  PAYFAGTTENWVSCAGCGVTLGHS----LGAFLSLAVAGHSGSDFALAS----------- 83

Query: 347 TKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPIT 406
                                            + ++   D      PI  I+  + P  
Sbjct: 84  ----------------------TSFARSAKGKRTDYVEVFDPVT-FLPIADIELPDAPRF 120

Query: 407 A-------LALSPDRGTVFTGSH-DGFITRWNAKTGENDRVQGAGHGNQINGMKATGELL 458
           +       +        +             +     +D++  +     I+         
Sbjct: 121 SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHP--GAAATH 178

Query: 459 YTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSL 518
           Y      ++   DL+                           +   Q +  +N +  ++ 
Sbjct: 179 YLGSCPASLAASDLA--------------------AAPAAAGIVGAQCTGAQNCSSQAAQ 218

Query: 519 PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPS-NE 577
             +Y    +       L     A        ++      KA+          +   + + 
Sbjct: 219 A-NYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDG 277

Query: 578 YLVASDAHRKVVLYRVPD---FELAHNKEWGF--HSAKVNCVAWSPD--SALVASGSLDT 630
            ++ +  H +  L    +      +  +  G   +    + +  + D  S   A+ +   
Sbjct: 278 IMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTE 337

Query: 631 TIIIWSLAS 639
            + I+  AS
Sbjct: 338 VLDIYDAAS 346

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.8 bits (89), Expect = 0.002
 Identities = 15/217 (6%), Positives = 44/217 (20%), Gaps = 14/217 (6%)

Query: 20  DPKGKNFLYTNGNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISD 79
              G +      +   F   P           G             +           + 
Sbjct: 152 SVPGASDDQLTKSASCFHIHPG---AAATHYLGSCPASLAASDLAAAPAAAG---IVGAQ 205

Query: 80  IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIG----GPIKDI 135
                +C+   A+ +  G  + +   S                 + +  G          
Sbjct: 206 CTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG 265

Query: 136 GTLLSLTSIRN-ILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWS 194
             +++     + I++L++    +    +           +          G     I  +
Sbjct: 266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPI---SNGHDSDAIIAA 322

Query: 195 PDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKP 231
            D                ++ + +      +     P
Sbjct: 323 QDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGP 359

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 57.1 bits (137), Expect = 3e-09
 Identities = 53/403 (13%), Positives = 102/403 (25%), Gaps = 80/403 (19%)

Query: 245 IITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA 304
            +T  +   IA+ +G  ++ K         V   R S SG +    G DGKV + D    
Sbjct: 35  SVTLRDAGQIALIDGSTYEIKTVLDTGYA-VHISRLSASGRYLFVIGRDGKVNMIDLWMK 93

Query: 305 DLVSELGNPA---HKGGVYAVAWKPDGTQLL-TASGDKTCKLWDIETKSVVSEFIMGNQV 360
           +  +          +    +     +    +  A       + D ET             
Sbjct: 94  EPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT 153

Query: 361 EDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGT-VFT 419
            D+Q                                        + A+  S  R   +  
Sbjct: 154 YDEQE---------------------------------YHPEPRVAAILASHYRPEFIVN 180

Query: 420 GSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSG 479
               G I   +     N +              +    L+  G+D + +    ++NA   
Sbjct: 181 VKETGKILLVDYTDLNNLKTT----------EISAERFLHDGGLDGSHRYFITAANA--- 227

Query: 480 PEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVG 539
                 ++   +D  E  LV +          G   + +   + P   +       VA+ 
Sbjct: 228 -----RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALI 282

Query: 540 GADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELA 599
           G D + H               D+   + D   +     L              P+ +  
Sbjct: 283 GTDPEGH--------------PDNAWKILDSFPALGGGSLFIKTH---------PNSQYL 319

Query: 600 HNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAK 642
           +        A+++      D   +     D       +A  A 
Sbjct: 320 YVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAG 362

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 52.1 bits (124), Expect = 1e-07
 Identities = 47/364 (12%), Positives = 94/364 (25%), Gaps = 36/364 (9%)

Query: 87  AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRN 146
           AV++++ S SG Y+      GKV + D   KE     E   IG   + I T         
Sbjct: 63  AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI-KIGSEARSIETSKMEGWEDK 121

Query: 147 ILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKD---------IAWSPDN 197
                    IA      +  I D    E         +    ++         I  S   
Sbjct: 122 YA-------IAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR 174

Query: 198 QRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVF 257
              +V  +   +   V  ++            + ++      S  + I   +  N + V 
Sbjct: 175 PEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVI 234

Query: 258 EGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGA-SADLVSELGNPAHK 316
           +    K     ++            +  H           + D + +       G+P + 
Sbjct: 235 DTKEGKLVAI-EDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNA 293

Query: 317 GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLT 376
             +        G  L   +   +  L+   T        +  + E      ++    +  
Sbjct: 294 WKILDSFPALGGGSLFIKTHPNSQYLYVDAT--------LNPEAEISGSVAVFDIKAMTG 345

Query: 377 VSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTV-----FTGSHDGFITRWNA 431
                    L +   +     I      +     + D   V          +  +   + 
Sbjct: 346 DGSDPEFKTLPIAEWAG----ITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDD 401

Query: 432 KTGE 435
           KT E
Sbjct: 402 KTLE 405

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 55.6 bits (132), Expect = 7e-09
 Identities = 36/283 (12%), Positives = 80/283 (28%), Gaps = 12/283 (4%)

Query: 155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF 214
           YIA+ + S  + + D  + +        P+G        SPD  ++ V          V 
Sbjct: 5   YIANSE-SDNISVIDVTSNKVTAT---IPVGSNPMGAVISPDGTKVYVANAHS---NDVS 57

Query: 215 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF 274
           + +T T+    +  +              ++   +  ++                +  + 
Sbjct: 58  IIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS 117

Query: 275 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA 334
              +  SP G          K            + +   +       +A  PDGT++  A
Sbjct: 118 PLGLALSPDGKKLYVTNNGDKTVSVINTVTK--AVINTVSVGRSPKGIAVTPDGTKVYVA 175

Query: 335 SGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS-T 393
           + D           + V + +                   +T     F +   ++  +  
Sbjct: 176 NFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235

Query: 394 PIRVIKGHNKPITALALSPDRGTVF-TGSHDGFITRWNAKTGE 435
               I     P   +A++PD   V+   S    ++  +  T  
Sbjct: 236 ITARIPVGPDP-AGIAVTPDGKKVYVALSFCNTVSVIDTATNT 277

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 46.4 bits (108), Expect = 6e-06
 Identities = 42/272 (15%), Positives = 81/272 (29%), Gaps = 11/272 (4%)

Query: 376 TVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVF-TGSHDGFITRWNAKTG 434
             S S  IS +DV +       I   + P     +SPD   V+   +H   ++  +  T 
Sbjct: 7   ANSESDNISVIDVTSN-KVTATIPVGSNP-MGAVISPDGTKVYVANAHSNDVSIIDTATN 64

Query: 435 ENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDID 494
                  AG   Q   +   G+ +Y   +  +   V  +++      VK G  P GL + 
Sbjct: 65  NVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALS 124

Query: 495 ------ENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIY 548
                   T        +      A ++++ +   P  I++  +   V V   DS     
Sbjct: 125 PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISV 184

Query: 549 ELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHS 608
                +           P          +  V +       +  +               
Sbjct: 185 IDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP 244

Query: 609 AKVNCVAWSPD-SALVASGSLDTTIIIWSLAS 639
                +A +PD   +  + S   T+ +   A+
Sbjct: 245 D-PAGIAVTPDGKKVYVALSFCNTVSVIDTAT 275

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 42.9 bits (99), Expect = 8e-05
 Identities = 35/306 (11%), Positives = 76/306 (24%), Gaps = 26/306 (8%)

Query: 59  FLY---TNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYI-ASGDISGKVRIWDT 114
           F Y   +  +++ + ++ +  ++      S  +     SP G  +  +   S  V I DT
Sbjct: 3   FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAV-ISPDGTKVYVANAHSNDVSIIDT 61

Query: 115 VNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKE 174
                I           +        +                S  ++G V+   +    
Sbjct: 62  ATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGL 121

Query: 175 HILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINS 234
                   P G  +           ++           V +  +   +      +K   +
Sbjct: 122 A-----LSPDGKKLYVTNNGDKTVSVINTVTKAVIN-TVSVGRSPKGIAVTPDGTKVYVA 175

Query: 235 CDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDG 294
                S        +        E  P    +  +    +V  V    +       G   
Sbjct: 176 NFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG-TN 234

Query: 295 KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLL-TASGDKTCKLWDIETKSVVSE 353
           K+                         +A  PDG ++    S   T  + D  T ++ + 
Sbjct: 235 KI-------------TARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITAT 281

Query: 354 FIMGNQ 359
             +G  
Sbjct: 282 MAVGKN 287

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 48.4 bits (114), Expect = 2e-06
 Identities = 32/186 (17%), Positives = 51/186 (27%), Gaps = 9/186 (4%)

Query: 287 FASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIE 346
             +    G++ L DG S  +V  +        V+       G  LL    D    + D+ 
Sbjct: 35  SVTLRDAGQIALVDGDSKKIVKVI---DTGYAVHISRMSASGRYLLVIGRDARIDMIDLW 91

Query: 347 TKS--VVSEFIMGNQVEDQQVSCLWQGD---YLLTVSLSGFISYLDVNNPSTPIRVIKGH 401
            K    V+E  +G +    + S     +    +         + +D         V    
Sbjct: 92  AKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRG 151

Query: 402 NKPITALALSPDRGTVFTGSHDGFITRWNAK-TGENDRVQGAGHGNQINGMKATGELLYT 460
               T       R      SH+      N K TG+   V      N           L  
Sbjct: 152 MTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLAD 211

Query: 461 CGIDDT 466
            G D +
Sbjct: 212 GGWDSS 217

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.6 bits (112), Expect = 3e-06
 Identities = 38/330 (11%), Positives = 88/330 (26%), Gaps = 22/330 (6%)

Query: 47  PIVLGGDPKGKNFLY---TNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASG 103
           P     D    N       +   + + + ++  I  +      AV++++ S SG Y+   
Sbjct: 21  PKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVI 79

Query: 104 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS-IGFYIASGDIS 162
               ++ + D   KE     E            +       R  +  +      A  D  
Sbjct: 80  GRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 139

Query: 163 GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSV 222
                     +   +  + +     +  I  S ++   +V  +   +   V   +     
Sbjct: 140 TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT 199

Query: 223 GEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVF---EGPPFKFKMTKQEHSRFVQAVR 279
               G +  +    +  S  + +   +  N +AV    +          +       A  
Sbjct: 200 VTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF 259

Query: 280 YSPSGS--HFASAGFDGKVFLYDGASADLVSELGN-----PAHKGGVYAVAWKPDGTQLL 332
             P        S   DG + L      +                GG   +   P  + L 
Sbjct: 260 VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLY 319

Query: 333 -------TASGDKTCKLWDIETKSVVSEFI 355
                   A   ++  ++D++      + +
Sbjct: 320 VDTTFNPDARISQSVAVFDLKNLDAKYQVL 349

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.3 bits (111), Expect = 4e-06
 Identities = 39/334 (11%), Positives = 87/334 (26%), Gaps = 26/334 (7%)

Query: 322 VAWKPDGTQLL--TASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSL 379
                D   L   T        L D ++K +V     G  V   ++S    G YLL +  
Sbjct: 24  QLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMS--ASGRYLLVIGR 81

Query: 380 SGFISYLDVNNPST----PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE 435
              I  +D+          I++        ++     +      G++             
Sbjct: 82  DARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 141

Query: 436 NDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDE 495
             +   +  G  ++      E      I  + +  +   N     +V L +       D 
Sbjct: 142 EPKQIVSTRGMTVDTQTYHPE-PRVAAIIASHEHPEFIVNVKETGKVLLVN-----YKDI 195

Query: 496 NTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSL 555
           + L   ++     + +G   SS       ++ S              + V + +  +   
Sbjct: 196 DNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR 255

Query: 556 SPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVA 615
                    GPV   S        +     +    Y    ++     +          + 
Sbjct: 256 GANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQY---AWKKVAELQG--QGGGSLFIK 310

Query: 616 WSP-------DSALVASGSLDTTIIIWSLASPAK 642
             P       D+       +  ++ ++ L +   
Sbjct: 311 THPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 344

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 381

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.0 bits (114), Expect = 2e-06
 Identities = 21/160 (13%), Positives = 41/160 (25%), Gaps = 5/160 (3%)

Query: 249 SEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHF-ASAGFDGKVFLYDGASADLV 307
           S  N +   +        T     + V  ++   +      S      + L   ++  L 
Sbjct: 102 STRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQLA 161

Query: 308 SELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSC 367
             + +        AV  K    Q       +  K ++    S + E       E   +S 
Sbjct: 162 QNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEEL---PVEEYSPLSV 218

Query: 368 LWQGDYLLTVSLSGFISYLDVNNP-STPIRVIKGHNKPIT 406
                          IS  D        + +IK  +   +
Sbjct: 219 TILSPQDFLAVFGNVISETDDEVSYDQKMYIIKHIDGSAS 258

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 41.7 bits (96), Expect = 2e-04
 Identities = 37/314 (11%), Positives = 77/314 (24%), Gaps = 17/314 (5%)

Query: 246 ITGSEDNTIAVFE-GPPFKFKMTKQ-EHSRFVQAVRYSPSGSH-FASAGFDGKVFLYDGA 302
           I   E   I V+         +T+  +    VQ +  SP   + +     + +V  Y  A
Sbjct: 8   IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA 67

Query: 303 SADLVSELGNPAHKGG-VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVE 361
             D        +   G +  ++    G  +   S +            +    +   +  
Sbjct: 68  PDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL 127

Query: 362 DQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS 421
           D   S     D       +     + +   S    ++      +T +  +  R  VF  +
Sbjct: 128 DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN 187

Query: 422 HDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPE 481
                      +  +       HGN                              +    
Sbjct: 188 EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYAC 247

Query: 482 VKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGA 541
            +  S      + E+  V                        P   ++DH    +   G 
Sbjct: 248 DRTASLITVFSVSEDGSVLSKEGFQPTETQ------------PRGFNVDHSGKYLIAAGQ 295

Query: 542 DSK-VHIYELNNKS 554
            S  + +YE+  + 
Sbjct: 296 KSHHISVYEIVGEQ 309

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 39.4 bits (90), Expect = 0.001
 Identities = 35/312 (11%), Positives = 76/312 (24%), Gaps = 28/312 (8%)

Query: 155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE--------- 205
           YIAS + S ++ +W+  ++  +   +   + G ++ +  SPD + + V            
Sbjct: 7   YIASPE-SQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65

Query: 206 ---GRERFGHVFMSETGTSVGEIS----GQSKPINSCDFKPSRPFRIITGSEDNTIAVFE 258
                        S    S+  IS    GQ   + S +       R+  G     + V E
Sbjct: 66  IAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE 125

Query: 259 GPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL-----YDGASADLVSELGNP 313
           G            +R +             +   DG +                  +   
Sbjct: 126 GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFH 185

Query: 314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDY 373
            ++   Y V        +                  +   F       D  ++       
Sbjct: 186 PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP-DGRHL 244

Query: 374 LLTVSLSGFISYLDVNNPSTPIRVIK--GHNKPITALALSPDRGTVF-TGSHDGFITRW- 429
                 +  I+   V+   + +                +      +   G     I+ + 
Sbjct: 245 YACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYE 304

Query: 430 -NAKTGENDRVQ 440
              + G      
Sbjct: 305 IVGEQGLLHEKG 316

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 37.9 bits (86), Expect = 0.003
 Identities = 30/355 (8%), Positives = 72/355 (20%), Gaps = 60/355 (16%)

Query: 287 FASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA-SGDKTCKLWDI 345
           + ++    ++ +++      ++        G V  +   PD   L      +     + I
Sbjct: 7   YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRI 66

Query: 346 ETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPI 405
                   F   + +              ++    G   ++   N               
Sbjct: 67  APDDGALTFAAESALPGSLTH--------ISTDHQGQFVFVGSYNAGNVSVTRLEDG--- 115

Query: 406 TALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDD 465
                                          D    A        +           +  
Sbjct: 116 -------------------LPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFT 156

Query: 466 TIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPS 525
                 L +   +      G+ PR +                               E  
Sbjct: 157 VSDDGHLVAQDPAEVTTVEGAGPRHMVFH--------------------------PNEQY 190

Query: 526 SISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAH 585
           +  ++  +  V V          E                   D   +P   +L A D  
Sbjct: 191 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT 250

Query: 586 RKVVLYRVPDFELAHNKEWGFHS--AKVNCVAWSPD-SALVASGSLDTTIIIWSL 637
             ++       + +   + GF     +            L+A+G     I ++ +
Sbjct: 251 ASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEI 305

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	683
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.98
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.98
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.98
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.97
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.97
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.97
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.97
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.97
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.97
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.96
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.96
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.95
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.93
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.93
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.93
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.92
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.92
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.9
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.88
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.87
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.85
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.85
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.85
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.77
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.74
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.73
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.7
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.68
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.66
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.47
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.44
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.39
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.32
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.31
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.3
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.27
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.27
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.26
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.25
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.24
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.16
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.16
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	99.14
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.13
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.07
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.96
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.72
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.66
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.65
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	98.43
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.39
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	98.36
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	98.33
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	98.3
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.29
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	98.29
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	98.28
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.19
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.12
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.08
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	98.07
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	98.03
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.98
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	97.96
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.92
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.89
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.87
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	97.77
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.76
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.7
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.57
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	96.64
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	96.01
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	95.67
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	94.77
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	94.62
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	94.45
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	93.24
d1jtdb_	273	beta-lactamase inhibitor protein-II, BLIP-II {Stre	92.74
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	92.17
d1jtdb_	273	beta-lactamase inhibitor protein-II, BLIP-II {Stre	91.93
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	90.51
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	89.83
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	89.21
d1wp5a_	323	Topoisomerase IV subunit A, ParC, C-terminal domai	82.17
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	81.15

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=7.4e-46  Score=348.69  Aligned_cols=303  Identities=49%  Similarity=0.921  Sum_probs=275.3

Q ss_pred             ccceeecCCCcccCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEE
Q psy15995         31 GNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVR  110 (683)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~  110 (683)
                      ....+++++|...++.+.+++++|+|+.|+++.++.|.+||+++++..+.+.+|.+.|++++|+|||++||+|+.||+|+
T Consensus         4 ~~~~~~~~~p~~~r~~~~~~a~~~~g~~l~~~~~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~   83 (311)
T d1nr0a1           4 SQTALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVR   83 (311)
T ss_dssp             EEEEEECCCCCCCTTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             cccccccCCCCCCCCCeEEEEEcCCCCEEEEEeCCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEe
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeE
Q psy15995        111 IWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKD  190 (683)
Q Consensus       111 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~  190 (683)
                      |||+.+++..                                                        ....+..|.++|.+
T Consensus        84 iwd~~~~~~~--------------------------------------------------------~~~~~~~~~~~v~~  107 (311)
T d1nr0a1          84 IWDTTQTTHI--------------------------------------------------------LKTTIPVFSGPVKD  107 (311)
T ss_dssp             EEESSSTTCC--------------------------------------------------------EEEEEECSSSCEEE
T ss_pred             eeeeeccccc--------------------------------------------------------cccccccccCcccc
Confidence            9998776321                                                        11223445688999


Q ss_pred             EEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc
Q psy15995        191 IAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE  270 (683)
Q Consensus       191 ~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~  270 (683)
                      ++|+|+++++++++.+.+..+.+|++++++....+.+|...|++++|+|++++.+++|+.|+.|++||.++++....+..
T Consensus       108 v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~  187 (311)
T d1nr0a1         108 ISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE  187 (311)
T ss_dssp             EEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccceeeeccccccccccccccccccccccccc
Confidence            99999999999999887777899999999999999999999999999999998899999999999999999999999999


Q ss_pred             cccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccC-----CccccCeEEEEEccCCCEEEEEECCCcEEEEEC
Q psy15995        271 HSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN-----PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI  345 (683)
Q Consensus       271 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  345 (683)
                      |...|.+++|+|+++++++++.|+.|++||..++.....+..     .+|...|.+++|+|++++|++++.||.|++||+
T Consensus       188 ~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~  267 (311)
T d1nr0a1         188 HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV  267 (311)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             ccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEEC
Confidence            999999999999999999999999999999999887776643     247889999999999999999999999999999


Q ss_pred             CCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecC
Q psy15995        346 ETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVN  389 (683)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~  389 (683)
                      ++++.+.++............+.++++.+++++.+|.|++||++
T Consensus       268 ~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         268 ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             TTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred             CCCcEEEEEECCCCccceEEEEEecCCEEEEEECCCEEEEEeCC
Confidence            99999998887777667777888899999999999999999974

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-41  Score=326.24  Aligned_cols=293  Identities=17%  Similarity=0.203  Sum_probs=251.2

Q ss_pred             cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE
Q psy15995         76 AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY  155 (683)
Q Consensus        76 ~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  155 (683)
                      +.++.+ +|...|+|++|||+|++||+|+ ||.|+|||+.++.....+...         ....+...|.+++|+|++++
T Consensus        43 ~~~~~~-~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~---------~~~~h~~~I~~v~~s~dg~~  111 (337)
T d1gxra_          43 RQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQL---------DCLNRDNYIRSCKLLPDGCT  111 (337)
T ss_dssp             EEEEEE-CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEE---------ECSCTTSBEEEEEECTTSSE
T ss_pred             eEEEEC-CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEe---------eecCCCCcEEEEEEcCCCCE
Confidence            344445 6999999999999999999997 789999999876543322211         11122367999999999999


Q ss_pred             EEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEE
Q psy15995        156 IASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSC  235 (683)
Q Consensus       156 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  235 (683)
                      |++++.||.|++||+..........+..+...+..++|+|++.++++++.+..  +.+|+..+++......+|...|.++
T Consensus       112 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~--i~~~~~~~~~~~~~~~~~~~~v~~l  189 (337)
T d1gxra_         112 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN--IAVWDLHNQTLVRQFQGHTDGASCI  189 (337)
T ss_dssp             EEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSC--EEEEETTTTEEEEEECCCSSCEEEE
T ss_pred             EEEeecccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc
Confidence            99999999999999987665566667778889999999999999998887654  7889999999999999999999999


Q ss_pred             EeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCcc
Q psy15995        236 DFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAH  315 (683)
Q Consensus       236 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~  315 (683)
                      +|++++.. +++++.|+.+++||+++++.+..+ .|...|.+++|+|+++++++++.|+.+++||+++++......   |
T Consensus       190 ~~s~~~~~-~~~~~~d~~v~i~d~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~  264 (337)
T d1gxra_         190 DISNDGTK-LWTGGLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL---H  264 (337)
T ss_dssp             EECTTSSE-EEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECC---C
T ss_pred             cccccccc-cccccccccccccccccceeeccc-ccccceEEEEEcccccccceeccccccccccccccccccccc---c
Confidence            99999985 999999999999999999877665 478899999999999999999999999999999888765543   8


Q ss_pred             ccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcce
Q psy15995        316 KGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPI  395 (683)
Q Consensus       316 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~  395 (683)
                      ...|.+++|+|++++|++++.||.|++||+.+++.+..                                          
T Consensus       265 ~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~------------------------------------------  302 (337)
T d1gxra_         265 ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ------------------------------------------  302 (337)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE------------------------------------------
T ss_pred             ccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEE------------------------------------------
Confidence            99999999999999999999999999999998876533                                          


Q ss_pred             eeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcC
Q psy15995        396 RVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNA  431 (683)
Q Consensus       396 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~  431 (683)
                         ..|...|.+++|+|++++|++|+.||.|++||+
T Consensus       303 ---~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         303 ---SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             ---EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             ---ccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence               236788999999999999999999999999986

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-40  Score=316.19  Aligned_cols=280  Identities=15%  Similarity=0.193  Sum_probs=241.7

Q ss_pred             ccCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCCcccc-----cccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCC
Q psy15995         42 TQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISD-----IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVN  116 (683)
Q Consensus        42 ~~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~-----~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~  116 (683)
                      .+...+.+++|||+|++||+++++.|+|||++++....     ...+|.+.|++++|+|||++|++|+.||.|++||+..
T Consensus        49 ~H~~~V~~v~fs~~g~~latg~dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~  128 (337)
T d1gxra_          49 NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAA  128 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCC
T ss_pred             CCCCcEEEEEECCCCCEEEEEECCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeecccccccccccc
Confidence            45678999999999999999999999999998764322     2457999999999999999999999999999999876


Q ss_pred             cccc--cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEc
Q psy15995        117 KEHI--LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWS  194 (683)
Q Consensus       117 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s  194 (683)
                      ....  ..+..+.              ..+..++|+|++.++++++.|+.|++|++.+++...  ....+...+.+++|+
T Consensus       129 ~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~--~~~~~~~~v~~l~~s  192 (337)
T d1gxra_         129 PTPRIKAELTSSA--------------PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR--QFQGHTDGASCIDIS  192 (337)
T ss_dssp             C--EEEEEEECSS--------------SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE--EECCCSSCEEEEEEC
T ss_pred             ccccccccccccc--------------cccccccccccccccccccccccccccccccccccc--ccccccccccccccc
Confidence            5432  2222222              568889999999999999999999999999887543  445667899999999


Q ss_pred             CCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccC
Q psy15995        195 PDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF  274 (683)
Q Consensus       195 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~  274 (683)
                      +++..+++++.++.  +.+|+.++++.+..+ .|...|.+++|+|+++. +++++.|+.+++||.+..+.. ....|...
T Consensus       193 ~~~~~~~~~~~d~~--v~i~d~~~~~~~~~~-~~~~~i~~l~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~  267 (337)
T d1gxra_         193 NDGTKLWTGGLDNT--VRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEW-LAVGMESSNVEVLHVNKPDKY-QLHLHESC  267 (337)
T ss_dssp             TTSSEEEEEETTSE--EEEEETTTTEEEEEE-ECSSCEEEEEECTTSSE-EEEEETTSCEEEEETTSSCEE-EECCCSSC
T ss_pred             cccccccccccccc--ccccccccceeeccc-ccccceEEEEEcccccc-cceeccccccccccccccccc-cccccccc
Confidence            99999999887654  788898888877655 47889999999999985 999999999999999888765 45678999


Q ss_pred             eEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEEC
Q psy15995        275 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI  345 (683)
Q Consensus       275 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~  345 (683)
                      |.+++|+|++++|++++.||.|++||..+++.+..+.   |...|.+++|+|++++|++++.||.|++||+
T Consensus       268 i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         268 VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             cceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEcc---CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            9999999999999999999999999999999888765   7889999999999999999999999999986

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-39  Score=309.59  Aligned_cols=295  Identities=20%  Similarity=0.319  Sum_probs=265.6

Q ss_pred             EeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEe
Q psy15995         70 RNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILV  149 (683)
Q Consensus        70 ~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  149 (683)
                      |.. .+...+.|+||+++|++++|+|++++||||+.||+|+|||+.+++.+..+..|.              ..|.++++
T Consensus         3 w~p-~~~~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~--------------~~V~~~~~   67 (317)
T d1vyhc1           3 WIP-RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT--------------DSVQDISF   67 (317)
T ss_dssp             CCC-CSSCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCS--------------SCEEEEEE
T ss_pred             cCC-CCCccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCC--------------CcEEEEee
Confidence            533 344556799999999999999999999999999999999999999888887765              77999999


Q ss_pred             eccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCC
Q psy15995        150 LSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQS  229 (683)
Q Consensus       150 s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (683)
                      +|++.+++++..++.+.+|+....+..  ..+..+...+.++.|+|+++.+++++.+..  +.+|+.++++....+.+|.
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~  143 (317)
T d1vyhc1          68 DHSGKLLASCSADMTIKLWDFQGFECI--RTMHGHDHNVSSVSIMPNGDHIVSASRDKT--IKMWEVQTGYCVKTFTGHR  143 (317)
T ss_dssp             CTTSSEEEEEETTSCCCEEETTSSCEE--ECCCCCSSCEEEEEECSSSSEEEEEETTSE--EEEEETTTCCEEEEEECCS
T ss_pred             ecccccccccccccccccccccccccc--cccccccccceeeeccCCCceEEeeccCcc--eeEeecccceeeeEEccCC
Confidence            999999999999999999999887644  445566789999999999999998887654  7899999999999999999


Q ss_pred             cCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCC--------------------CEEEE
Q psy15995        230 KPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSG--------------------SHFAS  289 (683)
Q Consensus       230 ~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~--------------------~~l~~  289 (683)
                      ..+.+++|+|++.. +++++.|+.|++|+..+++....+..|...+.++.++|++                    ..+++
T Consensus       144 ~~~~~~~~~~~~~~-l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (317)
T d1vyhc1         144 EWVRMVRPNQDGTL-IASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS  222 (317)
T ss_dssp             SCEEEEEECTTSSE-EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEE
T ss_pred             CcceeeecccCCCE-EEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEe
Confidence            99999999999995 9999999999999999999999999999999999998753                    46899


Q ss_pred             EcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEe
Q psy15995        290 AGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW  369 (683)
Q Consensus       290 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  369 (683)
                      ++.|+.|++|+..+++.+..+..  |...|.+++|+|++++|++++.||.|++||+++++.+.                 
T Consensus       223 ~~~d~~i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-----------------  283 (317)
T d1vyhc1         223 GSRDKTIKMWDVSTGMCLMTLVG--HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK-----------------  283 (317)
T ss_dssp             EETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCE-----------------
T ss_pred             ccCCCEEEEEECCCCcEEEEEeC--CCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEE-----------------
Confidence            99999999999999999998876  99999999999999999999999999999998876543                 


Q ss_pred             cCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEc
Q psy15995        370 QGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN  430 (683)
Q Consensus       370 ~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~  430 (683)
                                                 .+.+|..+|++++|+|++++|++|+.||.|++||
T Consensus       284 ---------------------------~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         284 ---------------------------TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             ---------------------------EEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             ---------------------------EEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence                                       3467899999999999999999999999999997

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.8e-39  Score=303.31  Aligned_cols=295  Identities=31%  Similarity=0.510  Sum_probs=241.3

Q ss_pred             CceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEE
Q psy15995        262 FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCK  341 (683)
Q Consensus       262 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  341 (683)
                      |+..+.+++|...|++++|+|++++|++|+.||.|++||+++++....+. ..|...|.+++|+|+++ +++++.|+.++
T Consensus         2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~-~~h~~~v~~v~~~~~g~-~~~~~~d~~v~   79 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFP-DVHATMITGIKTTSKGD-LFTVSWDDHLK   79 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSS-CSCSSCEEEEEECTTSC-EEEEETTTEEE
T ss_pred             CccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-CCCCCcEEEEEeeccce-eecccceeeEE
Confidence            46678899999999999999999999999999999999999999887774 34889999999999987 55667899999


Q ss_pred             EEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEe
Q psy15995        342 LWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS  421 (683)
Q Consensus       342 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  421 (683)
                      +|+.......                                         ........+...+.+++++|+++.+++++
T Consensus        80 ~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~s~~g~~~~~~~  118 (299)
T d1nr0a2          80 VVPAGGSGVD-----------------------------------------SSKAVANKLSSQPLGLAVSADGDIAVAAC  118 (299)
T ss_dssp             EECSSSSSSC-----------------------------------------TTSCCEEECSSCEEEEEECTTSSCEEEEE
T ss_pred             EeccCCcccc-----------------------------------------ccccccccccccccccccccccccccccc
Confidence            9998754321                                         11122345677889999999998877665


Q ss_pred             CCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEE
Q psy15995        422 HDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTV  501 (683)
Q Consensus       422 ~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (683)
                       ++.+.+|+.....  .                                                               
T Consensus       119 -~~~i~~~~~~~~~--~---------------------------------------------------------------  132 (299)
T d1nr0a2         119 -YKHIAIYSHGKLT--E---------------------------------------------------------------  132 (299)
T ss_dssp             -SSEEEEEETTEEE--E---------------------------------------------------------------
T ss_pred             -ccccccccccccc--c---------------------------------------------------------------
Confidence             5678888743110  0                                                               


Q ss_pred             EeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEE
Q psy15995        502 TVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVA  581 (683)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~  581 (683)
                                      .+....+.+++++|+++++++++.||.|++||+.+++........|..+|++++|+|++++|++
T Consensus       133 ----------------~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  196 (299)
T d1nr0a2         133 ----------------VPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVA  196 (299)
T ss_dssp             ----------------EECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred             ----------------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                            0111235678999999999999999999999999887665556678999999999999999999


Q ss_pred             EeCCCeEEEEECCCCcccc-ccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeE-eecCCCCCCeeEEE
Q psy15995        582 SDAHRKVVLYRVPDFELAH-NKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHII-IKNAHPQSQITRLQ  659 (683)
Q Consensus       582 ~~~d~~i~i~~~~~~~~~~-~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~-~~~~~~~~~v~~l~  659 (683)
                      ++.|+.|++||+.++.... ...+.+|...|++++|+|++++|++|+.||.|++||++++..... ....|+...|..+.
T Consensus       197 ~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~  276 (299)
T d1nr0a2         197 TDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVI  276 (299)
T ss_dssp             EETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEE
Confidence            9999999999998765433 334455899999999999999999999999999999998765543 44555677888888


Q ss_pred             EccCCeEEEeeCCCcEEEEeec
Q psy15995        660 WLDNDLLVSVGQDCNTKIWEIA  681 (683)
Q Consensus       660 ~~~~~~l~s~~~d~~v~vw~~~  681 (683)
                      |.++++|++++.|+.|++||++
T Consensus       277 ~~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         277 WLNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             EEETTEEEEEETTSCEEEEECC
T ss_pred             ECCCCEEEEEeCCCEEEEEecc
Confidence            8889999999999999999984

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.8e-39  Score=305.89  Aligned_cols=310  Identities=20%  Similarity=0.329  Sum_probs=259.9

Q ss_pred             CceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEE
Q psy15995        220 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLY  299 (683)
Q Consensus       220 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  299 (683)
                      .....+.+|.++|++++|+|++++ |++|+.||+|++||+++++.+..+.+|...|.+++|+|++.+++++..++.+..|
T Consensus         8 ~~~~~L~GH~~~I~~l~~sp~~~~-l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~   86 (317)
T d1vyhc1           8 PEKYALSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW   86 (317)
T ss_dssp             SCSCEEECCSSCEEEEEECSSSSE-EEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEE
T ss_pred             CccEEEcCCCCCeEEEEEcCCCCE-EEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccccccccccc
Confidence            345678999999999999999995 9999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEec
Q psy15995        300 DGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSL  379 (683)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  379 (683)
                      +....+....+..  |...+.++.++|+++.+++++.|+.+++||+++++....                          
T Consensus        87 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--------------------------  138 (317)
T d1vyhc1          87 DFQGFECIRTMHG--HDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKT--------------------------  138 (317)
T ss_dssp             ETTSSCEEECCCC--CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEE--------------------------
T ss_pred             ccccccccccccc--ccccceeeeccCCCceEEeeccCcceeEeecccceeeeE--------------------------
Confidence            9998888777765  899999999999999999999999999999998765433                          


Q ss_pred             CCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEE
Q psy15995        380 SGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLY  459 (683)
Q Consensus       380 ~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~  459 (683)
                                        +.+|...+.+++++|+++++++++.|+.|++|+..+++..... ..+...+.++.+..+.  
T Consensus       139 ------------------~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~--  197 (317)
T d1vyhc1         139 ------------------FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL-REHRHVVECISWAPES--  197 (317)
T ss_dssp             ------------------EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECCSC--
T ss_pred             ------------------EccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEE-ecCCCCceEEEEeecc--
Confidence                              4567888999999999999999999999999999988876665 4566666666554110  


Q ss_pred             EEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEE
Q psy15995        460 TCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVG  539 (683)
Q Consensus       460 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  539 (683)
                                     .                                       ..................+.+++++
T Consensus       198 ---------------~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~  223 (317)
T d1vyhc1         198 ---------------S---------------------------------------YSSISEATGSETKKSGKPGPFLLSG  223 (317)
T ss_dssp             ---------------G---------------------------------------GGGGGGCCSCC-------CCEEEEE
T ss_pred             ---------------c---------------------------------------cceeeccccceeeeeccCCceeEec
Confidence                           0                                       0000011122334455667899999


Q ss_pred             cCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCC
Q psy15995        540 GADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPD  619 (683)
Q Consensus       540 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d  619 (683)
                      +.|+.|++|++.+++..... .+|...|.+++|+|++++|++++.||.|++||+.+++++..  +.+|.+.|++++|+|+
T Consensus       224 ~~d~~i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~h~~~V~~~~~s~~  300 (317)
T d1vyhc1         224 SRDKTIKMWDVSTGMCLMTL-VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT--LNAHEHFVTSLDFHKT  300 (317)
T ss_dssp             ETTSEEEEEETTTTEEEEEE-ECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEE--EECCSSCEEEEEECSS
T ss_pred             cCCCEEEEEECCCCcEEEEE-eCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEE--EcCCCCCEEEEEEcCC
Confidence            99999999999998876443 36889999999999999999999999999999999987754  4459999999999999


Q ss_pred             CCeEEEeecCCcEEEEe
Q psy15995        620 SALVASGSLDTTIIIWS  636 (683)
Q Consensus       620 ~~~l~~~~~d~~v~iw~  636 (683)
                      +++|++|+.||+|++||
T Consensus       301 ~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         301 APYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             SSCEEEEETTSEEEEEC
T ss_pred             CCEEEEEeCCCeEEEeC
Confidence            99999999999999997

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.7e-39  Score=313.83  Aligned_cols=348  Identities=21%  Similarity=0.297  Sum_probs=259.3

Q ss_pred             EEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeecc
Q psy15995        101 ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNE  180 (683)
Q Consensus       101 as~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~  180 (683)
                      .....++...+|+....+.... ..         .....|...|.+++|+|||++||+|+ |+.|+|||+.+++.+....
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~-~l---------~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~  100 (388)
T d1erja_          32 LKKQTNDYYILYNPALPREIDV-EL---------HKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLS  100 (388)
T ss_dssp             SEEECSSCEEEECTTSCCCEEE-EE---------EEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEEC
T ss_pred             cccCCCCcEEEeCCCCCcceee-ee---------EeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeec
Confidence            3566778899999765543221 11         11233458899999999999999987 8999999999887654332


Q ss_pred             ccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC
Q psy15995        181 FHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP  260 (683)
Q Consensus       181 ~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~  260 (683)
                      ...  .....    +                      ..........|...|++++|+|++++ |++++.||.|++|+..
T Consensus       101 ~~~--~~~~~----~----------------------~~~~~~~~~~~~~~V~~l~~s~~~~~-l~s~~~dg~v~i~~~~  151 (388)
T d1erja_         101 DDS--AANKD----P----------------------ENLNTSSSPSSDLYIRSVCFSPDGKF-LATGAEDRLIRIWDIE  151 (388)
T ss_dssp             C---------------------------------------------CCCCBEEEEEECTTSSE-EEEEETTSCEEEEETT
T ss_pred             ccc--ccccc----c----------------------cccccccccCCCCCEEEEEECCCCCc-ceeccccccccccccc
Confidence            211  10000    0                      00111223568888999999999995 9999999999999999


Q ss_pred             CCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc-CCCEEEEEECCCc
Q psy15995        261 PFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP-DGTQLLTASGDKT  339 (683)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~  339 (683)
                      .++......+|...|.++++++++..+++++.++.+++||..+........   +.....++.+.+ ++++|++++.|+.
T Consensus       152 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~  228 (388)
T d1erja_         152 NRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS---IEDGVTTVAVSPGDGKYIAAGSLDRA  228 (388)
T ss_dssp             TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---CSSCEEEEEECSTTCCEEEEEETTSC
T ss_pred             ccccccccccccccccccccccccccccccccceeeeeeeccccccccccc---cccccccccccCCCCCeEEEEcCCCe
Confidence            999999999999999999999999999999999999999999988877765   344455555555 8899999999999


Q ss_pred             EEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEE
Q psy15995        340 CKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFT  419 (683)
Q Consensus       340 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  419 (683)
                      +++|+..++.....+.                                     .......+|...|.+++|+|++++|++
T Consensus       229 i~i~~~~~~~~~~~~~-------------------------------------~~~~~~~~h~~~v~~l~~s~~~~~l~s  271 (388)
T d1erja_         229 VRVWDSETGFLVERLD-------------------------------------SENESGTGHKDSVYSVVFTRDGQSVVS  271 (388)
T ss_dssp             EEEEETTTCCEEEEEC-------------------------------------------CCCSSCEEEEEECTTSSEEEE
T ss_pred             EEEeecccCccceeec-------------------------------------cccccccCCCCCEEEEEECCCCCEEEE
Confidence            9999999988766542                                     122334578999999999999999999


Q ss_pred             EeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEE
Q psy15995        420 GSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLV  499 (683)
Q Consensus       420 ~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (683)
                      ++.||.|++||+.+...........                                                       
T Consensus       272 ~~~d~~i~iwd~~~~~~~~~~~~~~-------------------------------------------------------  296 (388)
T d1erja_         272 GSLDRSVKLWNLQNANNKSDSKTPN-------------------------------------------------------  296 (388)
T ss_dssp             EETTSEEEEEEC--------------------------------------------------------------------
T ss_pred             EECCCcEEEEeccCCcccccccccc-------------------------------------------------------
Confidence            9999999999987655432221000                                                       


Q ss_pred             EEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEE
Q psy15995        500 TVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYL  579 (683)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  579 (683)
                                                                .+..           ......|...|++++|+|++++|
T Consensus       297 ------------------------------------------~~~~-----------~~~~~~~~~~v~~~~~s~~~~~l  323 (388)
T d1erja_         297 ------------------------------------------SGTC-----------EVTYIGHKDFVLSVATTQNDEYI  323 (388)
T ss_dssp             --------------------------------------------CE-----------EEEEECCSSCEEEEEECGGGCEE
T ss_pred             ------------------------------------------ccce-----------eeecccccceEEEEEECCCCCEE
Confidence                                                      0000           01122367889999999999999


Q ss_pred             EEEeCCCeEEEEECCCCccccccceeeecccEEEEEe------cCCCCeEEEeecCCcEEEEeCC
Q psy15995        580 VASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAW------SPDSALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       580 ~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~------s~d~~~l~~~~~d~~v~iw~~~  638 (683)
                      ++|+.||.|++||+.+++.+..  +.+|.+.|+++++      +|++++||+|+.||+|+||+++
T Consensus       324 ~sg~~dg~i~vwd~~~~~~~~~--l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         324 LSGSKDRGVLFWDKKSGNPLLM--LQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             EEEETTSEEEEEETTTCCEEEE--EECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             EEEeCCCEEEEEECCCCcEEEE--EeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence            9999999999999999988754  4459999999975      6789999999999999999985

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.9e-39  Score=313.03  Aligned_cols=318  Identities=21%  Similarity=0.312  Sum_probs=240.8

Q ss_pred             EEEecCCeEEEEeCCCCcccc----cccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCccc
Q psy15995         59 FLYTNGNSVIIRNIENPAISD----IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKD  134 (683)
Q Consensus        59 l~~~~~~~i~v~~~~~~~~~~----~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  134 (683)
                      +.-..++...+|+....+...    ...+|++.|+|++|||||++||+|+ |++|+|||+.+++.+..+..+...     
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~-----  105 (388)
T d1erja_          32 LKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAA-----  105 (388)
T ss_dssp             SEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC---------
T ss_pred             cccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccc-----
Confidence            444466788899876554321    2236999999999999999999997 889999999998776665444210     


Q ss_pred             ceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEE
Q psy15995        135 IGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF  214 (683)
Q Consensus       135 ~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~  214 (683)
                                                      ..+.   ..........+...|.+++|+|++++|++++.++.  +.+|
T Consensus       106 --------------------------------~~~~---~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~--v~i~  148 (388)
T d1erja_         106 --------------------------------NKDP---ENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRL--IRIW  148 (388)
T ss_dssp             ------------------------------------------------CCCCBEEEEEECTTSSEEEEEETTSC--EEEE
T ss_pred             --------------------------------cccc---cccccccccCCCCCEEEEEECCCCCcceecccccc--cccc
Confidence                                            0000   11112233456688999999999999999887754  7899


Q ss_pred             EccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCC
Q psy15995        215 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDG  294 (683)
Q Consensus       215 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  294 (683)
                      +...++.+....+|...|.++.+++++.. +++++.++.+++||..+.........+...+....+.+++++|++++.||
T Consensus       149 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~  227 (388)
T d1erja_         149 DIENRKIVMILQGHEQDIYSLDYFPSGDK-LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDR  227 (388)
T ss_dssp             ETTTTEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTS
T ss_pred             ccccccccccccccccccccccccccccc-ccccccceeeeeeeccccccccccccccccccccccCCCCCeEEEEcCCC
Confidence            99999999999999999999999999985 99999999999999999888877776666555555556889999999999


Q ss_pred             cEEEEeCCCCeeEEeccC-----CccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEe
Q psy15995        295 KVFLYDGASADLVSELGN-----PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW  369 (683)
Q Consensus       295 ~i~iw~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  369 (683)
                      .|++|+..++.....+..     ..|...|.+++|+|++++|++++.||.+++||+.++...........          
T Consensus       228 ~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----------  297 (388)
T d1erja_         228 AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS----------  297 (388)
T ss_dssp             CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------------------
T ss_pred             eEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccc----------
Confidence            999999999887766543     23788999999999999999999999999999987765433321110          


Q ss_pred             cCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCccee
Q psy15995        370 QGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQIN  449 (683)
Q Consensus       370 ~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~  449 (683)
                                            .........|...|.+++|+|++++|++|+.||.|++||+.+++.+..+ .+|...|.
T Consensus       298 ----------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l-~~H~~~V~  354 (388)
T d1erja_         298 ----------------------GTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML-QGHRNSVI  354 (388)
T ss_dssp             -----------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEE
T ss_pred             ----------------------cceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEE-eCCCCCEE
Confidence                                  1223445678899999999999999999999999999999999887766 56777777


Q ss_pred             EEEE
Q psy15995        450 GMKA  453 (683)
Q Consensus       450 ~~~~  453 (683)
                      ++.+
T Consensus       355 ~~~~  358 (388)
T d1erja_         355 SVAV  358 (388)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            6654

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.1e-38  Score=304.74  Aligned_cols=293  Identities=19%  Similarity=0.346  Sum_probs=249.9

Q ss_pred             cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE
Q psy15995         76 AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY  155 (683)
Q Consensus        76 ~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  155 (683)
                      +..++|+||.++|++++|+|++++||||+.||+|+|||+.+++.+..+..|.              ..|.+++|+|++.+
T Consensus        46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~--------------~~v~~v~~~~~~~~  111 (340)
T d1tbga_          46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRS--------------SWVMTCAYAPSGNY  111 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSC--------------SCEEEEEECTTSSE
T ss_pred             eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEeccc--------------ccEEeeEeecccee
Confidence            4567799999999999999999999999999999999999999888877765              77999999999999


Q ss_pred             EEeecCCccEEEEeccccceee--eccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeE
Q psy15995        156 IASGDISGKVRIWDTVNKEHIL--KNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPIN  233 (683)
Q Consensus       156 l~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  233 (683)
                      +++++.|+.+++|+........  ...+..+..........+ +..+.....+..  ...+.............+...+.
T Consensus       112 l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  188 (340)
T d1tbga_         112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTT--CALWDIETGQQTTTFTGHTGDVM  188 (340)
T ss_dssp             EEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEE-TTEEEEEETTTE--EEEEETTTTEEEEEEECCSSCEE
T ss_pred             eeeecccceeecccccccccccccceeccccccccccccccc-cccccccccccc--ccccccccccccccccccceeEe
Confidence            9999999999999987654322  223344444444444444 344444444432  45566666667777788889999


Q ss_pred             EEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC
Q psy15995        234 SCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP  313 (683)
Q Consensus       234 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~  313 (683)
                      ...+.+.+.. +++++.|+.|++||+++++....+.+|...|.+++|+|++++|++++.||.|++|++........+...
T Consensus       189 ~~~~~~~~~~-~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~  267 (340)
T d1tbga_         189 SLSLAPDTRL-FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD  267 (340)
T ss_dssp             EEEECTTSSE-EEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT
T ss_pred             eeccccccce-eEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccc
Confidence            9999999985 999999999999999999999999999999999999999999999999999999999999888877666


Q ss_pred             ccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCc
Q psy15995        314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPST  393 (683)
Q Consensus       314 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~  393 (683)
                      .+...|.+++|+|++++|++++.||.|++||+.+++.+.                                         
T Consensus       268 ~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~-----------------------------------------  306 (340)
T d1tbga_         268 NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG-----------------------------------------  306 (340)
T ss_dssp             TCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEE-----------------------------------------
T ss_pred             cccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEE-----------------------------------------
Confidence            688899999999999999999999999999998876643                                         


Q ss_pred             ceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEc
Q psy15995        394 PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN  430 (683)
Q Consensus       394 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~  430 (683)
                         .+.+|..+|++++|+|++++|++|+.||.|++||
T Consensus       307 ---~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         307 ---VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             ---EECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             ---EEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence               3467899999999999999999999999999997

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=8.1e-38  Score=293.57  Aligned_cols=291  Identities=13%  Similarity=0.146  Sum_probs=239.3

Q ss_pred             cCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc
Q psy15995        184 IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK  263 (683)
Q Consensus       184 ~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  263 (683)
                      ..+....++++|+|+.++.+.++.   +.+|+.+++.....+.+|...|++++|+|++++ |++|+.||+|++||+...+
T Consensus        16 ~r~~~~~~a~~~~g~~l~~~~~~~---v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~-latg~~dg~i~iwd~~~~~   91 (311)
T d1nr0a1          16 ARGTAVVLGNTPAGDKIQYCNGTS---VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYY-CASGDVHGNVRIWDTTQTT   91 (311)
T ss_dssp             CTTCCCCCEECTTSSEEEEEETTE---EEEEETTCSSCCEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEESSSTT
T ss_pred             CCCCeEEEEEcCCCCEEEEEeCCE---EEEEECCCCceeEEEcCCCCCEEEEEEeCCCCe-EeccccCceEeeeeeeccc
Confidence            345677899999999999886543   688999999999999999999999999999996 9999999999999998876


Q ss_pred             ee--eeccccccCeEEEEECCCCCEEEEEcC--CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCE-EEEEECCC
Q psy15995        264 FK--MTKQEHSRFVQAVRYSPSGSHFASAGF--DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQ-LLTASGDK  338 (683)
Q Consensus       264 ~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg  338 (683)
                      ..  ..+..|...|.+++|+|+++++++++.  +..+++|++++++....+..  |...|.+++|+|++++ |++++.|+
T Consensus        92 ~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~--h~~~v~~v~~~~~~~~~l~sgs~d~  169 (311)
T d1nr0a1          92 HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTG--QARAMNSVDFKPSRPFRIISGSDDN  169 (311)
T ss_dssp             CCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCC--CSSCEEEEEECSSSSCEEEEEETTS
T ss_pred             cccccccccccCccccccccccccccccccccccccccccccccccccccccc--cccccccccccccceeeeccccccc
Confidence            44  557789999999999999999998875  45699999999988888765  9999999999999885 78899999


Q ss_pred             cEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEE
Q psy15995        339 TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVF  418 (683)
Q Consensus       339 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  418 (683)
                      .|++||+++++...                                            .+..|..+|+++.++|++++++
T Consensus       170 ~i~i~d~~~~~~~~--------------------------------------------~~~~~~~~i~~v~~~p~~~~l~  205 (311)
T d1nr0a1         170 TVAIFEGPPFKFKS--------------------------------------------TFGEHTKFVHSVRYNPDGSLFA  205 (311)
T ss_dssp             CEEEEETTTBEEEE--------------------------------------------EECCCSSCEEEEEECTTSSEEE
T ss_pred             cccccccccccccc--------------------------------------------ccccccccccccccCccccccc
Confidence            99999999776543                                            2356889999999999999999


Q ss_pred             EEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeE
Q psy15995        419 TGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTL  498 (683)
Q Consensus       419 ~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (683)
                      +++.|+.|++||..++.....+....                                                      
T Consensus       206 ~~~~d~~v~~~d~~~~~~~~~~~~~~------------------------------------------------------  231 (311)
T d1nr0a1         206 STGGDGTIVLYNGVDGTKTGVFEDDS------------------------------------------------------  231 (311)
T ss_dssp             EEETTSCEEEEETTTCCEEEECBCTT------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccc------------------------------------------------------
Confidence            99999999999998876554432110                                                      


Q ss_pred             EEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCE
Q psy15995        499 VTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEY  578 (683)
Q Consensus       499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  578 (683)
                                      .....+...+.+++|+|++++|++|+.||.|++||+.+++........+......+.+.+++++
T Consensus       232 ----------------~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~  295 (311)
T d1nr0a1         232 ----------------LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA  295 (311)
T ss_dssp             ----------------SSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC
T ss_pred             ----------------cccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCE
Confidence                            0011234567889999999999999999999999999998775554433333334445556678


Q ss_pred             EEEEeCCCeEEEEECC
Q psy15995        579 LVASDAHRKVVLYRVP  594 (683)
Q Consensus       579 l~~~~~d~~i~i~~~~  594 (683)
                      |++++.||.|++||.+
T Consensus       296 l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         296 LVSISANGFINFVNPE  311 (311)
T ss_dssp             EEEEETTCCEEEEETT
T ss_pred             EEEEECCCEEEEEeCC
Confidence            9999999999999974

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.2e-37  Score=295.33  Aligned_cols=306  Identities=32%  Similarity=0.604  Sum_probs=250.8

Q ss_pred             ccceeecCCCcccCCCeEEEeeCCCCCeEEEecCCeEEE--EeCCCC--cccccccCc-ccceEEEEECC--CCcEEEEe
Q psy15995         31 GNKYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVII--RNIENP--AISDIYTEH-SCAVNVAKYSP--SGFYIASG  103 (683)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~v--~~~~~~--~~~~~~~~h-~~~v~~~~~s~--d~~~las~  103 (683)
                      .++..+++.|.+.++.+++++|+|+|+.|+++.+..+.+  |+....  .....+.+| ...|++++|+|  +|++||+|
T Consensus         4 ~l~~~~p~~p~t~~~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasg   83 (325)
T d1pgua1           4 SLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSG   83 (325)
T ss_dssp             EEEEEECCCCCCCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEE
T ss_pred             ccccccCCcCCCCCCCeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEE
Confidence            457788899999999999999999999999998776655  444333  334557777 56899999998  67899999


Q ss_pred             cCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccc
Q psy15995        104 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHP  183 (683)
Q Consensus       104 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~  183 (683)
                      +.||+|+|||+..++....+..+                                                  ....+..
T Consensus        84 s~Dg~i~iWd~~~~~~~~~~~~~--------------------------------------------------~~~~~~~  113 (325)
T d1pgua1          84 DESGKVIVWGWTFDKESNSVEVN--------------------------------------------------VKSEFQV  113 (325)
T ss_dssp             ETTSEEEEEEEEEEGGGTEEEEE--------------------------------------------------EEEEEEC
T ss_pred             eCCCCEEEeeecCCcceeeeecc--------------------------------------------------ccccccc
Confidence            99999999998776543322111                                                  1112234


Q ss_pred             cCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc
Q psy15995        184 IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK  263 (683)
Q Consensus       184 ~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  263 (683)
                      +.++|.+++|+++++++++++.+.+....+|++++++.+..+.+|...|.+++|+|++++++++++.|+.+++||..+.+
T Consensus       114 ~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~  193 (325)
T d1pgua1         114 LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK  193 (325)
T ss_dssp             CSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE
T ss_pred             ccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccc
Confidence            56889999999999999999988888899999999999999999999999999999999878899999999999998887


Q ss_pred             eeeec---cccccCeEEEEECCC-CCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEc---cCCCEEEEEEC
Q psy15995        264 FKMTK---QEHSRFVQAVRYSPS-GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWK---PDGTQLLTASG  336 (683)
Q Consensus       264 ~~~~~---~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~l~~~~~  336 (683)
                      .....   ..|...|.+++|+|+ ++++++++.|+.|++||+++++.+..+..  |..++..+.|+   |++++|++++.
T Consensus       194 ~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~--~~~~v~~~~~s~~~~dg~~l~s~s~  271 (325)
T d1pgua1         194 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIED--DQEPVQGGIFALSWLDSQKFATVGA  271 (325)
T ss_dssp             EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCB--TTBCCCSCEEEEEESSSSEEEEEET
T ss_pred             cceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccc--cccccccceeeeeccCCCEEEEEeC
Confidence            66554   456788999999997 57899999999999999999999998875  66666555554   68999999999


Q ss_pred             CCcEEEEECCCCceeeEEEecCc-ceeceEEEEe-cCCEEEEEecCCcEEEEec
Q psy15995        337 DKTCKLWDIETKSVVSEFIMGNQ-VEDQQVSCLW-QGDYLLTVSLSGFISYLDV  388 (683)
Q Consensus       337 dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~~~~g~i~~~~~  388 (683)
                      |+.|++||+++++.+..+..... .....+.+.+ .+.++++++.||.|++||+
T Consensus       272 D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         272 DATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             TSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             CCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            99999999999999888875543 3344555555 4568999999999999985

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.7e-38  Score=304.67  Aligned_cols=309  Identities=16%  Similarity=0.209  Sum_probs=237.5

Q ss_pred             CCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCc--eeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCe
Q psy15995        228 QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK--FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASAD  305 (683)
Q Consensus       228 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  305 (683)
                      ..++|++++|+|++.+ |++++.|+.|++||..+++  ....+.+|..+|.+++|+|++++|++++.|+.|++||+.++.
T Consensus         6 ~~~pIt~~~~s~dg~~-la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~   84 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQ-IAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT   84 (371)
T ss_dssp             CSSCCCEEEECTTSSE-EEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred             CCCCeEEEEECCCCCE-EEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccc
Confidence            3478999999999995 9999999999999987765  566788999999999999999999999999999999999887


Q ss_pred             eEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEE
Q psy15995        306 LVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY  385 (683)
Q Consensus       306 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~  385 (683)
                      ....+....|...|.+++|+|+++.|++++.|+.+++|++.........                               
T Consensus        85 ~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~-------------------------------  133 (371)
T d1k8kc_          85 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC-------------------------------  133 (371)
T ss_dssp             EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEE-------------------------------
T ss_pred             cccccccccccccccccccccccccceeecccCcceeeeeecccccccc-------------------------------
Confidence            6666555558899999999999999999999999999998765543222                               


Q ss_pred             EecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCC
Q psy15995        386 LDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDD  465 (683)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~  465 (683)
                               ......|...|.+++|+|++++|++++.|+.|++|+..............                     
T Consensus       134 ---------~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~---------------------  183 (371)
T d1k8kc_         134 ---------KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTP---------------------  183 (371)
T ss_dssp             ---------EEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBT---------------------
T ss_pred             ---------cccccccccccccccccccccceeccccCcEEEEEeeccCcccccccccc---------------------
Confidence                     12234578899999999999999999999999999987654322110000                     


Q ss_pred             eEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcE
Q psy15995        466 TIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKV  545 (683)
Q Consensus       466 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i  545 (683)
                          |+.                                                        -.+.+..+.        
T Consensus       184 ----~~~--------------------------------------------------------~~~~~~~~~--------  195 (371)
T d1k8kc_         184 ----WGS--------------------------------------------------------KMPFGELMF--------  195 (371)
T ss_dssp             ----TBS--------------------------------------------------------CCCTTCEEE--------
T ss_pred             ----ccc--------------------------------------------------------cccceeeee--------
Confidence                000                                                        000011111        


Q ss_pred             EEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEE
Q psy15995        546 HIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVAS  625 (683)
Q Consensus       546 ~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~  625 (683)
                                   ....|...|.+++|+|++++|++++.|+.|++||+.+++.+...  ..|..+|++++|+||+++|++
T Consensus       196 -------------~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~s~~fs~d~~~la~  260 (371)
T d1k8kc_         196 -------------ESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL--ASETLPLLAVTFITESSLVAA  260 (371)
T ss_dssp             -------------ECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE--ECSSCCEEEEEEEETTEEEEE
T ss_pred             -------------eccCccCcEEEEEeecccccccccccCCcceEEeeecccceeee--ecccccceeeeecCCCCEEEE
Confidence                         11237778999999999999999999999999999988776543  348899999999999998887


Q ss_pred             eecCCcEEEEeCCCCceeeEe---------------------------------------ecCCCCCCeeEEEEcc-C--
Q psy15995        626 GSLDTTIIIWSLASPAKHIII---------------------------------------KNAHPQSQITRLQWLD-N--  663 (683)
Q Consensus       626 ~~~d~~v~iw~~~~~~~~~~~---------------------------------------~~~~~~~~v~~l~~~~-~--  663 (683)
                      |. |+.+++|..........+                                       ....|.+.|+++++.+ +  
T Consensus       261 g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~~  339 (371)
T d1k8kc_         261 GH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKA  339 (371)
T ss_dssp             ET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTT
T ss_pred             Ec-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccceecccccCCEEEEEEeCCCCc
Confidence            65 676666654332211110                                       0112678999999972 2  


Q ss_pred             --CeEEEeeCCCcEEEEeecc
Q psy15995        664 --DLLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       664 --~~l~s~~~d~~v~vw~~~~  682 (683)
                        ..++|+|.||.|++|+++.
T Consensus       340 ~~~~~~T~g~Dg~v~iW~~~~  360 (371)
T d1k8kc_         340 KCSQFCTTGMDGGMSIWDVRS  360 (371)
T ss_dssp             SCSEEEEEETTSEEEEEEHHH
T ss_pred             ceEEEEEEcCCCeEEEEeCCc
Confidence              2689999999999999863

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2e-37  Score=291.45  Aligned_cols=293  Identities=18%  Similarity=0.218  Sum_probs=229.3

Q ss_pred             CcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccc-cccCCCCcccceeeeeecceeeeEeeccc
Q psy15995         75 PAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNE-FHPIGGPIKDIGTLLSLTSIRNILVLSIG  153 (683)
Q Consensus        75 ~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  153 (683)
                      |++.+++.||.++|++++|+|||++||||+.||+|++||+.+++.+..+. .|.              ..|.+++|+|++
T Consensus         2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~--------------~~v~~v~~~~~g   67 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHA--------------TMITGIKTTSKG   67 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCS--------------SCEEEEEECTTS
T ss_pred             CccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCC--------------CcEEEEEeeccc
Confidence            56678899999999999999999999999999999999999988776653 232              678999999999


Q ss_pred             eEEEeecCCccEEEEecccccee-eeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCe
Q psy15995        154 FYIASGDISGKVRIWDTVNKEHI-LKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPI  232 (683)
Q Consensus       154 ~~l~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  232 (683)
                      +++ +++.|+.+++|+....... .......+...+.+++|+|+++.+++...+.   +.+|.  .++.....  ....+
T Consensus        68 ~~~-~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~---i~~~~--~~~~~~~~--~~~~~  139 (299)
T d1nr0a2          68 DLF-TVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKH---IAIYS--HGKLTEVP--ISYNS  139 (299)
T ss_dssp             CEE-EEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSE---EEEEE--TTEEEEEE--CSSCE
T ss_pred             eee-cccceeeEEEeccCCcccccccccccccccccccccccccccccccccccc---ccccc--cccccccc--ccccc
Confidence            755 5556899999998764322 1222334567889999999999888776652   44444  33333322  34567


Q ss_pred             EEEEeecCCCeEEEEeeCCCeEEEEcCCCCceee-eccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEec-
Q psy15995        233 NSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM-TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL-  310 (683)
Q Consensus       233 ~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-  310 (683)
                      .+++|+|+++. +++++.|+.+++||+++.+... ....|...|.+++|+|++++|++++.|+.|++||+.++...... 
T Consensus       140 ~~~~~s~~~~~-l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~  218 (299)
T d1nr0a2         140 SCVALSNDKQF-VAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTN  218 (299)
T ss_dssp             EEEEECTTSCE-EEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCC
T ss_pred             ccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            89999999985 9999999999999998776544 44578899999999999999999999999999999887655433 


Q ss_pred             cCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCC
Q psy15995        311 GNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNN  390 (683)
Q Consensus       311 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~  390 (683)
                      ....|...|.+++|+|++++|++++.||.|++||++++.......                                   
T Consensus       219 ~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-----------------------------------  263 (299)
T d1nr0a2         219 SWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIII-----------------------------------  263 (299)
T ss_dssp             CCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEE-----------------------------------
T ss_pred             cccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEE-----------------------------------
Confidence            223488999999999999999999999999999998765432211                                   


Q ss_pred             CCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCC
Q psy15995        391 PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK  432 (683)
Q Consensus       391 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~  432 (683)
                            ....+...+.++.+ +++++|++++.|+.|++||+.
T Consensus       264 ------~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         264 ------KGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             ------TTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred             ------ecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEecc
Confidence                  01123455666655 566899999999999999974

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2e-36  Score=292.75  Aligned_cols=327  Identities=17%  Similarity=0.233  Sum_probs=259.8

Q ss_pred             eeeeecCCcCe-EEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEe
Q psy15995        222 VGEISGQSKPI-NSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD  300 (683)
Q Consensus       222 ~~~~~~~~~~v-~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  300 (683)
                      ..+|++|...| +|++|  +++ +|++|+.||+|++||..+++.+..+.+|...|.+++|+|+ .+|++++.|+.|++|+
T Consensus         5 ~~tL~GH~~~vitc~~~--~~~-~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~   80 (355)
T d1nexb2           5 RTTLRGHMTSVITCLQF--EDN-YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWD   80 (355)
T ss_dssp             EEEEECCSSSCEEEEEE--ETT-EEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEE
T ss_pred             cEEECCcCCCcEEEEEE--CCC-EEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEeccccccccc
Confidence            34689998886 55555  556 4999999999999999999999999999999999999986 4899999999999999


Q ss_pred             CCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecC--------------------cc
Q psy15995        301 GASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGN--------------------QV  360 (683)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--------------------~~  360 (683)
                      ....+.........+........+.++++.+++++.|+.+++||+.+...........                    ..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (355)
T d1nexb2          81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH  160 (355)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECC
T ss_pred             ccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeec
Confidence            9999888777664455566777888999999999999999999998765543321111                    11


Q ss_pred             eeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceec
Q psy15995        361 EDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       361 ~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~  440 (683)
                      ........++++.++.+..++.+++||+.. .+.+....++...+.++.++|+++.+++++.|+.|++||+.++......
T Consensus       161 ~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~  239 (355)
T d1nexb2         161 MASVRTVSGHGNIVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL  239 (355)
T ss_dssp             SSCEEEEEEETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred             cccccccccccceeeeecccceeeeeeccc-ccceeeeeccccccccccccccceeeecccccceEEeeecccccccccc
Confidence            122344566889999999999999999987 4556667788899999999999999999999999999999999887776


Q ss_pred             cCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecC
Q psy15995        441 GAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPI  520 (683)
Q Consensus       441 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  520 (683)
                       .+|...|.++.++++++++++.|+.|++||+.+...                                     ......
T Consensus       240 -~~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-------------------------------------~~~~~~  281 (355)
T d1nexb2         240 -QGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSR-------------------------------------KFSYHH  281 (355)
T ss_dssp             -CCCSSCCCEEEECSSEEEEECTTSEEEEEETTTCCE-------------------------------------EEEEEC
T ss_pred             -ccccccccccccccceeeeeecccccccccccccce-------------------------------------eccccc
Confidence             679999999999999999999999999999876421                                     111111


Q ss_pred             CCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEEC
Q psy15995        521 DYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRV  593 (683)
Q Consensus       521 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~  593 (683)
                      .......+++++++++++| .|+.|++||+++++.+.....+|.++|++++|+|+ .++++++.||+++||.+
T Consensus       282 ~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~~  352 (355)
T d1nexb2         282 TNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEIL  352 (355)
T ss_dssp             TTCCCCCEEEECSSEEEEE-ETTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEEEE
T ss_pred             CCceEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEEE
Confidence            1122334567777777665 58999999999998876666679999999999986 57888899998766543

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.8e-36  Score=289.75  Aligned_cols=295  Identities=16%  Similarity=0.267  Sum_probs=242.0

Q ss_pred             CceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEE
Q psy15995        262 FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCK  341 (683)
Q Consensus       262 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  341 (683)
                      .+..+++++|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+..  |...|.+++|+|+++++++++.|+.++
T Consensus        45 ~~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~--~~~~v~~v~~~~~~~~l~~~~~d~~i~  122 (340)
T d1tbga_          45 MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGNYVACGGLDNICS  122 (340)
T ss_dssp             CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEEC--SCSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred             eeeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEec--ccccEEeeEeeccceeeeeecccceee
Confidence            345677899999999999999999999999999999999999999998876  999999999999999999999999999


Q ss_pred             EEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEe
Q psy15995        342 LWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS  421 (683)
Q Consensus       342 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  421 (683)
                      +|+.........                                        ....+.+|........... +..+....
T Consensus       123 ~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~  161 (340)
T d1tbga_         123 IYNLKTREGNVR----------------------------------------VSRELAGHTGYLSCCRFLD-DNQIVTSS  161 (340)
T ss_dssp             EEESSSSCSCCC----------------------------------------EEEEECCCSSCEEEEEEEE-TTEEEEEE
T ss_pred             cccccccccccc----------------------------------------cceeccccccccccccccc-cccccccc
Confidence            999876543221                                        1223445555555544443 45667777


Q ss_pred             CCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEE
Q psy15995        422 HDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTV  501 (683)
Q Consensus       422 ~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (683)
                      .+.....+............                                                            
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~------------------------------------------------------------  181 (340)
T d1tbga_         162 GDTTCALWDIETGQQTTTFT------------------------------------------------------------  181 (340)
T ss_dssp             TTTEEEEEETTTTEEEEEEE------------------------------------------------------------
T ss_pred             cccccccccccccccccccc------------------------------------------------------------
Confidence            77777777765443222211                                                            


Q ss_pred             EeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEE
Q psy15995        502 TVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVA  581 (683)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~  581 (683)
                                       .....+....+.+.+.++++++.|+.|++||+.+++..... .+|...|++++|+|++++|++
T Consensus       182 -----------------~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~-~~h~~~i~~v~~~p~~~~l~s  243 (340)
T d1tbga_         182 -----------------GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF-TGHESDINAICFFPNGNAFAT  243 (340)
T ss_dssp             -----------------CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSEEEE
T ss_pred             -----------------ccceeEeeeccccccceeEEeecCceEEEEECCCCcEEEEE-eCCCCCeEEEEECCCCCEEEE
Confidence                             11223566777888899999999999999999988776433 358899999999999999999


Q ss_pred             EeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc
Q psy15995        582 SDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL  661 (683)
Q Consensus       582 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~  661 (683)
                      ++.|+.+++|++...+.........|...|++++|+|++++|++|+.||.|++||+.+++....+..  |.+.|++++|+
T Consensus       244 ~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--H~~~V~~l~~s  321 (340)
T d1tbga_         244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG--HDNRVSCLGVT  321 (340)
T ss_dssp             EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECC--CSSCEEEEEEC
T ss_pred             EeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEe
Confidence            9999999999999887765544444778899999999999999999999999999999999888865  78999999999


Q ss_pred             -cCCeEEEeeCCCcEEEEe
Q psy15995        662 -DNDLLVSVGQDCNTKIWE  679 (683)
Q Consensus       662 -~~~~l~s~~~d~~v~vw~  679 (683)
                       ++.+|+|++.||.|++||
T Consensus       322 ~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         322 DDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             TTSSCEEEEETTSCEEEEC
T ss_pred             CCCCEEEEEccCCEEEEeC
Confidence             778999999999999997

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.7e-37  Score=297.61  Aligned_cols=325  Identities=14%  Similarity=0.161  Sum_probs=240.5

Q ss_pred             cccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc--cccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC
Q psy15995         84 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE--HILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI  161 (683)
Q Consensus        84 h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  161 (683)
                      +.++|+|++|+|||++||+|+.||.|+|||+.+++  .+..+..|.              ..|.+++|+|++++|++++.
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~--------------~~V~~l~fsp~~~~l~s~s~   71 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHN--------------GQVTGVDWAPDSNRIVTCGT   71 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCS--------------SCEEEEEEETTTTEEEEEET
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCC--------------CCEEEEEECCCCCEEEEEEC
Confidence            34789999999999999999999999999998765  344444444              78999999999999999999


Q ss_pred             CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCce----eeeecCCcCeEEEEe
Q psy15995        162 SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSV----GEISGQSKPINSCDF  237 (683)
Q Consensus       162 d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~  237 (683)
                      |++|++||+.+++......+..+...|.+++|+|+++.+++++.++.  +.+|.++.....    .....|...|.+++|
T Consensus        72 D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~--i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~  149 (371)
T d1k8kc_          72 DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV--ISICYFEQENDWWVCKHIKKPIRSTVLSLDW  149 (371)
T ss_dssp             TSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSS--EEEEEEETTTTEEEEEEECTTCCSCEEEEEE
T ss_pred             CCeEEEEeecccccccccccccccccccccccccccccceeecccCc--ceeeeeecccccccccccccccccccccccc
Confidence            99999999998776666666777889999999999999999987765  677777765432    335578999999999


Q ss_pred             ecCCCeEEEEeeCCCeEEEEcCCCC------------------ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEE
Q psy15995        238 KPSRPFRIITGSEDNTIAVFEGPPF------------------KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLY  299 (683)
Q Consensus       238 ~~~~~~~l~~~~~d~~i~iw~~~~~------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  299 (683)
                      +|++.+ |++++.|+++++|+....                  +.......|...|.+++|+|+++.|++++.|+.|++|
T Consensus       150 ~p~~~~-l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iw  228 (371)
T d1k8kc_         150 HPNSVL-LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLA  228 (371)
T ss_dssp             CTTSSE-EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred             cccccc-eeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEE
Confidence            999995 999999999999986532                  3455667889999999999999999999999999999


Q ss_pred             eCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceec--eEEEEecCCEEEEE
Q psy15995        300 DGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQ--QVSCLWQGDYLLTV  377 (683)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~  377 (683)
                      |+.+++.+..+..  |..+|.+++|+|++++|++ +.|+.+++|..........+.........  ......... +  .
T Consensus       229 d~~~~~~~~~~~~--~~~~v~s~~fs~d~~~la~-g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~  302 (371)
T d1k8kc_         229 DADKKMAVATLAS--ETLPLLAVTFITESSLVAA-GHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARER-F--Q  302 (371)
T ss_dssp             EGGGTTEEEEEEC--SSCCEEEEEEEETTEEEEE-ETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHH-H--H
T ss_pred             eeecccceeeeec--ccccceeeeecCCCCEEEE-EcCCceEEEEeeCCCceEEEeeeecCccccccccccceee-E--e
Confidence            9999999888875  8899999999999977665 55787777766554333222111000000  000000000 0  0


Q ss_pred             ecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCC----CEEEEEeCCCcEEEEcCCC
Q psy15995        378 SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR----GTVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       378 ~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~~w~~~~  433 (683)
                      ..+.........  .........|.+.|+++++.+.+    ..+++++.||.|++||+++
T Consensus       303 ~~~~~~~~~~~~--~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~  360 (371)
T d1k8kc_         303 NLDKKASSEGSA--AAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS  360 (371)
T ss_dssp             HCCCCC-----------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred             cccceeEEeccc--cccceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCc
Confidence            000000000000  01111223589999999998854    3588999999999999865

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4e-36  Score=290.64  Aligned_cols=333  Identities=17%  Similarity=0.223  Sum_probs=253.2

Q ss_pred             eEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccc
Q psy15995         47 PIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF  125 (683)
Q Consensus        47 ~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~  125 (683)
                      ++|+  ++|+++|+++ .|+.|+|||+.+++.++.+++|+++|++++|+|++ +|++|+.|++|++|++...+.......
T Consensus        16 itc~--~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~-~l~s~s~D~~i~iw~~~~~~~~~~~~~   92 (355)
T d1nexb2          16 ITCL--QFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEG   92 (355)
T ss_dssp             EEEE--EEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTT-EEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred             EEEE--EECCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCCC-EEEEEeccccccccccccccccccccc
Confidence            4555  4568899987 58999999999999999999999999999999965 899999999999999998876655443


Q ss_pred             ccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEec
Q psy15995        126 HPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE  205 (683)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  205 (683)
                      ...            ........+.+++.++++++.|+.|++||+.+..........   .........+...       
T Consensus        93 ~~~------------~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------  150 (355)
T d1nexb2          93 HNS------------TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEE---HDYPLVFHTPEEN-------  150 (355)
T ss_dssp             CSS------------CEEEEEEEEETTEEEEEEEETTSEEEEEECCC--------------CCCEEESCTTTC-------
T ss_pred             ccc------------cccccccccccccceeeeecCCCcEEEEEccCCceecccccc---ceeccceeccccc-------
Confidence            321            134456678899999999999999999999876543222111   1111222222211       


Q ss_pred             CCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCC
Q psy15995        206 GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGS  285 (683)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~  285 (683)
                                   .........|...+....  +++. .++++..|+.+++||..+++......++...+.++.++|+++
T Consensus       151 -------------~~~~~~~~~~~~~v~~~~--~~~~-~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (355)
T d1nexb2         151 -------------PYFVGVLRGHMASVRTVS--GHGN-IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERK  214 (355)
T ss_dssp             -------------TTEEEEEECCSSCEEEEE--EETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTT
T ss_pred             -------------cceeeeeeeccccccccc--cccc-eeeeecccceeeeeecccccceeeeeccccccccccccccce
Confidence                         111222334555555443  4455 499999999999999999999999999999999999999999


Q ss_pred             EEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceE
Q psy15995        286 HFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQV  365 (683)
Q Consensus       286 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  365 (683)
                      .+++++.|+.|++||.+++..+..+..  |...|.+++++  +++|++++.||.|++||+++....              
T Consensus       215 ~~~~~~~d~~i~i~d~~~~~~~~~~~~--h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~--------------  276 (355)
T d1nexb2         215 RCISASMDTTIRIWDLENGELMYTLQG--HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRK--------------  276 (355)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECC--CSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCEE--------------
T ss_pred             eeecccccceEEeeecccccccccccc--ccccccccccc--cceeeeeeccccccccccccccee--------------
Confidence            999999999999999999999998875  99999999987  468999999999999999876432              


Q ss_pred             EEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEE-EEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCC
Q psy15995        366 SCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITAL-ALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGH  444 (683)
Q Consensus       366 ~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~  444 (683)
                                                      +..|...+.++ .++++++++++| .|+.|++||+++++.+.....+|
T Consensus       277 --------------------------------~~~~~~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~~~~~~~~  323 (355)
T d1nexb2         277 --------------------------------FSYHHTNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVHANILKD  323 (355)
T ss_dssp             --------------------------------EEEECTTCCCCCEEEECSSEEEEE-ETTEEEEEETTTCCBCCSCTTTT
T ss_pred             --------------------------------cccccCCceEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEEEEEecCC
Confidence                                            12344444444 456677766665 58999999999999887666789


Q ss_pred             CcceeEEEEeCCeE-EEEEcCCeEEEEe
Q psy15995        445 GNQINGMKATGELL-YTCGIDDTIKQVD  471 (683)
Q Consensus       445 ~~~v~~~~~~~~~l-~~~~~d~~i~~~~  471 (683)
                      ...|.+++++++.+ ++++.||++++|.
T Consensus       324 ~~~V~~v~~~~~~~~~~~s~dg~~~l~~  351 (355)
T d1nexb2         324 ADQIWSVNFKGKTLVAAVEKDGQSFLEI  351 (355)
T ss_dssp             CSEEEEEEEETTEEEEEEESSSCEEEEE
T ss_pred             CCCEEEEEEcCCeEEEEEECCCcEEEEE
Confidence            99999999996654 5667899876654

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-35  Score=282.53  Aligned_cols=331  Identities=18%  Similarity=0.255  Sum_probs=265.5

Q ss_pred             EeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEe
Q psy15995         70 RNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILV  149 (683)
Q Consensus        70 ~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  149 (683)
                      |+..+.+..++|+||++.|.+ +++++|++||||+.||+|+|||+.+++++..+..|.              ..|.+++|
T Consensus         1 W~~~~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~--------------~~V~~v~~   65 (342)
T d2ovrb2           1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT--------------GGVWSSQM   65 (342)
T ss_dssp             HHHSCCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCS--------------SCEEEEEE
T ss_pred             CCCCCCCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCC--------------CCEEEEEe
Confidence            566677788889999999865 466789999999999999999999999988887775              77889999


Q ss_pred             eccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCC
Q psy15995        150 LSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQS  229 (683)
Q Consensus       150 s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (683)
                      +++  +|++++.|+.+++|+...........  .....+......  ...+..+..+.  .+.+++..+++....+..+.
T Consensus        66 ~~~--~l~s~s~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~d~--~i~~~~~~~~~~~~~~~~~~  137 (342)
T d2ovrb2          66 RDN--IIISGSTDRTLKVWNAETGECIHTLY--GHTSTVRCMHLH--EKRVVSGSRDA--TLRVWDIETGQCLHVLMGHV  137 (342)
T ss_dssp             ETT--EEEEEETTSCEEEEETTTTEEEEEEC--CCSSCEEEEEEE--TTEEEEEETTS--EEEEEESSSCCEEEEEECCS
T ss_pred             CCC--ccccceecccccccccccccceeccc--ccceeEeeeecc--cccccccccce--eEEEeecccccceeeeeccc
Confidence            875  99999999999999998876443332  223444444433  34455555443  36788888888777776665


Q ss_pred             cCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEe
Q psy15995        230 KPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSE  309 (683)
Q Consensus       230 ~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~  309 (683)
                      .......  +... .+++++.|+.+++||....+....+.+|...+....+  ++.++++++.||.|++||++.++.+..
T Consensus       138 ~~~~~~~--~~~~-~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~dg~i~~~d~~~~~~~~~  212 (342)
T d2ovrb2         138 AAVRCVQ--YDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHT  212 (342)
T ss_dssp             SCEEEEE--ECSS-CEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred             ccceeec--cccc-eeeeecCCCeEEEeecccceeeEEEcCcccccccccC--CCCEEEEEeCCCeEEEeecccceeeeE
Confidence            5544433  3334 4899999999999999999999999999877766554  678999999999999999999999988


Q ss_pred             ccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecC
Q psy15995        310 LGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVN  389 (683)
Q Consensus       310 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~  389 (683)
                      +..  |...+.+++++  +++|++++.|+.|++||+...+....+............+.++++++++++.||.|++||++
T Consensus       213 ~~~--~~~~v~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~Dg~i~iwd~~  288 (342)
T d2ovrb2         213 LTG--HQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK  288 (342)
T ss_dssp             ECC--CCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETT
T ss_pred             ecc--cccceeEEecC--CCEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCCCeeEEEcCCCEEEEEECC
Confidence            875  88899888876  46999999999999999999988877766666666667777889999999999999999998


Q ss_pred             CCCcceeee-----eeccccEEEEEEeCCCCEEEEEeCCCc----EEEEcCCC
Q psy15995        390 NPSTPIRVI-----KGHNKPITALALSPDRGTVFTGSHDGF----ITRWNAKT  433 (683)
Q Consensus       390 ~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~----i~~w~~~~  433 (683)
                      ++. .++.+     .+|...|++++|+|++.++++|+.||+    |++||+..
T Consensus       289 tg~-~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         289 TGE-FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             TCC-EEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             CCC-EEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence            854 34433     257788999999999999999999985    99999864

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-34  Score=274.66  Aligned_cols=328  Identities=18%  Similarity=0.241  Sum_probs=262.9

Q ss_pred             CCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEE
Q psy15995        218 TGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVF  297 (683)
Q Consensus       218 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  297 (683)
                      ..+....+++|.+.|.+ ++++++++ |++|+.||+|++||+.+++.+..+.+|...|.+++|+|+  +|++++.|+.++
T Consensus         5 ~~~~~~~l~GH~~~V~s-~~~~~g~~-l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~   80 (342)
T d2ovrb2           5 ELKSPKVLKGHDDHVIT-CLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLK   80 (342)
T ss_dssp             CCCCCEEEECSTTSCEE-EEEEETTE-EEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEE
T ss_pred             CCCcCEEECCcCCceEE-EEEECCCE-EEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccccceeccccc
Confidence            44567789999999865 36667775 999999999999999999999999999999999999875  899999999999


Q ss_pred             EEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEE
Q psy15995        298 LYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTV  377 (683)
Q Consensus       298 iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  377 (683)
                      +|+............  +...+......  ...+..+..|+.+.+|+..+++....+.....   ...........++.+
T Consensus        81 ~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  153 (342)
T d2ovrb2          81 VWNAETGECIHTLYG--HTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVA---AVRCVQYDGRRVVSG  153 (342)
T ss_dssp             EEETTTTEEEEEECC--CSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSS---CEEEEEECSSCEEEE
T ss_pred             ccccccccceecccc--cceeEeeeecc--cccccccccceeEEEeecccccceeeeecccc---cceeeccccceeeee
Confidence            999988877776654  55556555544  45788889999999999999887766544332   333455678899999


Q ss_pred             ecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCe
Q psy15995        378 SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGEL  457 (683)
Q Consensus       378 ~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~  457 (683)
                      +.++.+++||... ......+.+|...+..+  .+++.++++++.||.|++||++.++..... ..|...+.++.+++++
T Consensus       154 ~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~--~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~  229 (342)
T d2ovrb2         154 AYDFMVKVWDPET-ETCLHTLQGHTNRVYSL--QFDGIHVVSGSLDTSIRVWDVETGNCIHTL-TGHQSLTSGMELKDNI  229 (342)
T ss_dssp             ETTSCEEEEEGGG-TEEEEEECCCSSCEEEE--EECSSEEEEEETTSCEEEEETTTCCEEEEE-CCCCSCEEEEEEETTE
T ss_pred             cCCCeEEEeeccc-ceeeEEEcCcccccccc--cCCCCEEEEEeCCCeEEEeecccceeeeEe-cccccceeEEecCCCE
Confidence            9999999999987 45566677787766655  457889999999999999999998887766 5788899999999999


Q ss_pred             EEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEE
Q psy15995        458 LYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVA  537 (683)
Q Consensus       458 l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  537 (683)
                      +++++.|+.|++|++........                                   ............++.+++++++
T Consensus       230 l~s~s~d~~i~iwd~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~  274 (342)
T d2ovrb2         230 LVSGNADSTVKIWDIKTGQCLQT-----------------------------------LQGPNKHQSAVTCLQFNKNFVI  274 (342)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEE-----------------------------------ECSTTSCSSCEEEEEECSSEEE
T ss_pred             EEEEcCCCEEEEEeccccccccc-----------------------------------ccccceeeeceeecccCCCeeE
Confidence            99999999999999887532110                                   0001111233445555678999


Q ss_pred             EEcCCCcEEEEEcCCCccCcceee----cCCcCeeEEEECCCCCEEEEEeCCCe----EEEEECCC
Q psy15995        538 VGGADSKVHIYELNNKSLSPKAEL----DHLGPVTDCSFSPSNEYLVASDAHRK----VVLYRVPD  595 (683)
Q Consensus       538 ~~~~dg~i~i~d~~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~d~~----i~i~~~~~  595 (683)
                      +++.||.|++||+++++.+.....    +|...|++++|+|++.+|++|+.||+    |++||++.
T Consensus       275 s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         275 TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             EEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             EEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence            999999999999999887655432    46778999999999999999999985    99999863

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.2e-33  Score=263.87  Aligned_cols=290  Identities=17%  Similarity=0.206  Sum_probs=216.4

Q ss_pred             CeEEEEECCCCCEEEEEcCCC-cEEEEeCCCCe--eEEeccCCcc-ccCeEEEEEcc--CCCEEEEEECCCcEEEEECCC
Q psy15995        274 FVQAVRYSPSGSHFASAGFDG-KVFLYDGASAD--LVSELGNPAH-KGGVYAVAWKP--DGTQLLTASGDKTCKLWDIET  347 (683)
Q Consensus       274 ~v~~~~~~~~~~~l~~~~~dg-~i~iw~~~~~~--~~~~~~~~~~-~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~  347 (683)
                      .+++++|+|+++.|+.++.+. .|+.|+....+  ....+..  | ...|++++|+|  ++++|++++.||+|++||+..
T Consensus        19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~g--h~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~   96 (325)
T d1pgua1          19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTG--HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTF   96 (325)
T ss_dssp             CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECT--TTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred             CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeC--CCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecC
Confidence            467899999999999876543 35666654432  3444433  5 56899999998  568999999999999999877


Q ss_pred             CceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeC--CCc
Q psy15995        348 KSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSH--DGF  425 (683)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~  425 (683)
                      ++........                                    ....+..|.++|.+++|+++++++++++.  ++.
T Consensus        97 ~~~~~~~~~~------------------------------------~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~  140 (325)
T d1pgua1          97 DKESNSVEVN------------------------------------VKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNF  140 (325)
T ss_dssp             EGGGTEEEEE------------------------------------EEEEEECCSSCEEEEEECTTSSEEEEEECCSSCS
T ss_pred             Ccceeeeecc------------------------------------cccccccccCcEEEEEECCCCCccceeeccccce
Confidence            6554333211                                    11234568899999999999999987764  677


Q ss_pred             EEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEece
Q psy15995        426 ITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQ  505 (683)
Q Consensus       426 i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (683)
                      +.+|+..+++..... .+|..                                                           
T Consensus       141 ~~~~~~~~~~~~~~~-~~h~~-----------------------------------------------------------  160 (325)
T d1pgua1         141 GVFISWDSGNSLGEV-SGHSQ-----------------------------------------------------------  160 (325)
T ss_dssp             EEEEETTTCCEEEEC-CSCSS-----------------------------------------------------------
T ss_pred             EEEEeecccccceee-eeccc-----------------------------------------------------------
Confidence            899998877655444 23333                                                           


Q ss_pred             EEEEeCCceeeeecCCCCCcEEEEccCCCE-EEEEcCCCcEEEEEcCCCccCccee--ecCCcCeeEEEECCC-CCEEEE
Q psy15995        506 ISIVENGAKVSSLPIDYEPSSISLDHEHGL-VAVGGADSKVHIYELNNKSLSPKAE--LDHLGPVTDCSFSPS-NEYLVA  581 (683)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~s~~-~~~l~~  581 (683)
                                       .+.+++++|++.+ +++++.|+.+++||....+......  ..|...|++++|+|+ +.+|++
T Consensus       161 -----------------~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s  223 (325)
T d1pgua1         161 -----------------RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT  223 (325)
T ss_dssp             -----------------CEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEE
T ss_pred             -----------------ccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccc
Confidence                             3456677777654 5667788888888877665443322  247788999999996 689999


Q ss_pred             EeCCCeEEEEECCCCccccccceeeecccEEEEEec---CCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEE
Q psy15995        582 SDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWS---PDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRL  658 (683)
Q Consensus       582 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s---~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l  658 (683)
                      ++.|+.|++||+.+++.+....  +|..++.++.|+   ||+++|++++.|+.|+|||+++++.+..+....|...+..+
T Consensus       224 ~~~d~~i~iwd~~~~~~~~~l~--~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  301 (325)
T d1pgua1         224 VGSDRKISCFDGKSGEFLKYIE--DDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQV  301 (325)
T ss_dssp             EETTCCEEEEETTTCCEEEECC--BTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEE
T ss_pred             cccccceeeeeecccccccccc--ccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEE
Confidence            9999999999999998765543  377777666665   78999999999999999999999988877664444445555


Q ss_pred             EEc--cCCeEEEeeCCCcEEEEee
Q psy15995        659 QWL--DNDLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       659 ~~~--~~~~l~s~~~d~~v~vw~~  680 (683)
                      ++.  ++.+|++++.||.|++|+|
T Consensus       302 ~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         302 GVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             EEEEEETTEEEEEETTSCEEEEET
T ss_pred             EEEECCCCEEEEEECCCEEEEEEC
Confidence            544  6679999999999999996

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.2e-33  Score=258.68  Aligned_cols=273  Identities=25%  Similarity=0.388  Sum_probs=213.2

Q ss_pred             CceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEE
Q psy15995        262 FKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCK  341 (683)
Q Consensus       262 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  341 (683)
                      .++++++++|..+|++++|+|    |++|+.||+|++||+.++.       ..|...|.+++++++ ..+++++.|++++
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-------~~h~~~V~~~~~~~~-~~~~s~s~D~~v~   70 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-------QDHSNLIVSLDNSKA-QEYSSISWDDTLK   70 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE-------CCCCSCEEEEECCST-TCCEEEETTTEEE
T ss_pred             cceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC-------CCCCCCEEEEEecCC-CeEEEEeeccccc
Confidence            356788999999999999987    8999999999999987643       238889999999875 4578899999999


Q ss_pred             EEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEe
Q psy15995        342 LWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS  421 (683)
Q Consensus       342 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  421 (683)
                      +|++...+                                                   ....+..+.+++++..++++ 
T Consensus        71 ~w~~~~~~---------------------------------------------------~~~~~~~~~~~~~~~~~~~~-   98 (287)
T d1pgua2          71 VNGITKHE---------------------------------------------------FGSQPKVASANNDGFTAVLT-   98 (287)
T ss_dssp             ETTEEEEE---------------------------------------------------CSSCEEEEEECSSSEEEEEE-
T ss_pred             cccccccc---------------------------------------------------cccceeeeeeccCCceEEEe-
Confidence            99864211                                                   12335567778877666665 


Q ss_pred             CCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEE
Q psy15995        422 HDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTV  501 (683)
Q Consensus       422 ~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (683)
                      .++.+.+|+..+++.......                                                           
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------------------  119 (287)
T d1pgua2          99 NDDDLLILQSFTGDIIKSVRL-----------------------------------------------------------  119 (287)
T ss_dssp             TTSEEEEEETTTCCEEEEEEC-----------------------------------------------------------
T ss_pred             ecccceeeeccceeeeeeccc-----------------------------------------------------------
Confidence            455677888776654433210                                                           


Q ss_pred             EeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCC-cEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEE
Q psy15995        502 TVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADS-KVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLV  580 (683)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  580 (683)
                                           .....++++++..+++++.++ .+++|++............+..++++++|+|++++|+
T Consensus       120 ---------------------~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  178 (287)
T d1pgua2         120 ---------------------NSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIA  178 (287)
T ss_dssp             ---------------------SSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEE
T ss_pred             ---------------------cceeeeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccc
Confidence                                 112345667777888777765 6899998776655455556788999999999999999


Q ss_pred             EEeCCCeEEEEECCCCccccccceeeecccEEEEEecCC----------CCeEEEeecCCcEEEEeCCCCceeeEeecCC
Q psy15995        581 ASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPD----------SALVASGSLDTTIIIWSLASPAKHIIIKNAH  650 (683)
Q Consensus       581 ~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d----------~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~  650 (683)
                      +++.||.|++||+.+++..... +.+|...|++++|+|+          +.+|++|+.|++|++||++++........+ 
T Consensus       179 ~g~~dg~i~i~d~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~-  256 (287)
T d1pgua2         179 AGDVMGKILLYDLQSREVKTSR-WAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNA-  256 (287)
T ss_dssp             EEETTSCEEEEETTTTEEEECC-SCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTS-
T ss_pred             cccccccccceeeccccccccc-ccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCC-
Confidence            9999999999999988765432 3349999999999874          468999999999999999886655554433 


Q ss_pred             CCCCeeEEEEccCCeEEEeeCCCcEEEEee
Q psy15995        651 PQSQITRLQWLDNDLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       651 ~~~~v~~l~~~~~~~l~s~~~d~~v~vw~~  680 (683)
                      |...|++++|+++..|+|+|.|++|++|++
T Consensus       257 h~~~V~~v~~~~~~~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         257 HKDGVNNLLWETPSTLVSSGADACIKRWNV  286 (287)
T ss_dssp             STTCEEEEEEEETTEEEEEETTSCEEEEEE
T ss_pred             CCCCeEEEEECCCCEEEEEECCCeEEEEEE
Confidence            689999999998789999999999999997

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.9e-32  Score=252.03  Aligned_cols=282  Identities=20%  Similarity=0.290  Sum_probs=210.6

Q ss_pred             CcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccce
Q psy15995         75 PAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGF  154 (683)
Q Consensus        75 ~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  154 (683)
                      .+++++|+||.++|++++|+|    |+||+.||+|++||+.++..     .|.              ..|.++.+++++ 
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~~-----~h~--------------~~V~~~~~~~~~-   58 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ-----DHS--------------NLIVSLDNSKAQ-   58 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEEC-----CCC--------------SCEEEEECCSTT-
T ss_pred             cceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCCCC-----CCC--------------CCEEEEEecCCC-
Confidence            467889999999999999998    99999999999999887632     222              678889988765 


Q ss_pred             EEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEE
Q psy15995        155 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINS  234 (683)
Q Consensus       155 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  234 (683)
                      .+++++.|+++++|++...+         ....+..+++++++..+++...+.   +.+|...+++.+..+..+. .  .
T Consensus        59 ~~~s~s~D~~v~~w~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~--~  123 (287)
T d1pgua2          59 EYSSISWDDTLKVNGITKHE---------FGSQPKVASANNDGFTAVLTNDDD---LLILQSFTGDIIKSVRLNS-P--G  123 (287)
T ss_dssp             CCEEEETTTEEEETTEEEEE---------CSSCEEEEEECSSSEEEEEETTSE---EEEEETTTCCEEEEEECSS-C--E
T ss_pred             eEEEEeeccccccccccccc---------cccceeeeeeccCCceEEEeeccc---ceeeeccceeeeeeccccc-e--e
Confidence            57889999999999986543         225677899999988877765543   5677777787777766543 2  3


Q ss_pred             EEeecCCCeEEEEeeC-CCeEEEEcCCCCceeeecc-ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccC
Q psy15995        235 CDFKPSRPFRIITGSE-DNTIAVFEGPPFKFKMTKQ-EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN  312 (683)
Q Consensus       235 ~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  312 (683)
                      .++++++.. +++++. ++.+++|+....+....+. .|...+++++|+|++++|++++.||.|++||+.+++...... 
T Consensus       124 ~~~~~~~~~-~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~-  201 (287)
T d1pgua2         124 SAVSLSQNY-VAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRW-  201 (287)
T ss_dssp             EEEEECSSE-EEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCS-
T ss_pred             eeeeccCcc-eeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccc-
Confidence            466777776 555555 4579999987766655544 577889999999999999999999999999999988765432 


Q ss_pred             CccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCC
Q psy15995        313 PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS  392 (683)
Q Consensus       313 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~  392 (683)
                      ..|...|.+++|+|++.......                                 .++.++++++.|+.+++||+..+.
T Consensus       202 ~~h~~~v~~~~~~p~~~~~~~~~---------------------------------~~~~~l~sgs~D~~i~iw~~~~~~  248 (287)
T d1pgua2         202 AFRTSKINAISWKPAEKGANEEE---------------------------------IEEDLVATGSLDTNIFIYSVKRPM  248 (287)
T ss_dssp             CCCSSCEEEEEECCCC------C---------------------------------CSCCEEEEEETTSCEEEEESSCTT
T ss_pred             cccccccceeeeccccccccccc---------------------------------CCCCeeEeecCCCeEEEEECCCCC
Confidence            34899999999998654211111                                 122334444444555555544444


Q ss_pred             cceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcC
Q psy15995        393 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNA  431 (683)
Q Consensus       393 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~  431 (683)
                      ..+..+.+|...|++++|+|++ .+++++.|+.|++|++
T Consensus       249 ~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         249 KIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             CCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred             eEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence            4556667899999999999986 6889999999999985

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=100.00  E-value=1.4e-32  Score=266.03  Aligned_cols=321  Identities=12%  Similarity=0.053  Sum_probs=233.4

Q ss_pred             EEEeeCC-CCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCC--CEEEEeCCCcccccccc
Q psy15995         48 IVLGGDP-KGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISG--KVRIWDTVNKEHILKNE  124 (683)
Q Consensus        48 ~~~~~s~-~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg--~i~iwd~~~~~~~~~~~  124 (683)
                      ....||| ||+++|++..+.|++||.++++.++.  +|...|++++|||||++|++++.+.  .|++||+.+++... +.
T Consensus         6 ~~~~fSP~dG~~~a~~~~g~v~v~d~~~~~~~~~--~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~-~~   82 (360)
T d1k32a3           6 FAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK-FE   82 (360)
T ss_dssp             GEEEEEECGGGCEEEEETTEEEEECTTSSBEEEC--SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE-CC
T ss_pred             hcccccCCCCCEEEEEECCeEEEEECCCCcEEEc--cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEE-ee
Confidence            3467999 99999999999999999999887663  6999999999999999998776543  79999998876543 33


Q ss_pred             cccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEe
Q psy15995        125 FHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVG  204 (683)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  204 (683)
                      .+.              ..+.+++|+|||++|++++.++.+++|++.+++...  .+..+...+.+++|+|||++++.+.
T Consensus        83 ~~~--------------~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~spdg~~la~~~  146 (360)
T d1k32a3          83 ENL--------------GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTV--IERSREAMITDFTISDNSRFIAYGF  146 (360)
T ss_dssp             CCC--------------CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE--EEECSSSCCCCEEECTTSCEEEEEE
T ss_pred             CCC--------------ceEEeeeecccccccceeccccccccccccccceee--eeecccccccchhhccceeeeeeec
Confidence            332              678999999999999999999999999999887543  3445668899999999999999875


Q ss_pred             cC--------CceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee-------eecc
Q psy15995        205 EG--------RERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK-------MTKQ  269 (683)
Q Consensus       205 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~-------~~~~  269 (683)
                      ..        ....+.+|+..+++. ..+..+...+..+.|+|+++. |++++.++.+.+|+.......       ....
T Consensus       147 ~~~~~~~~~~~~~~~~v~d~~~~~~-~~~~~~~~~~~~~~~spdg~~-l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~  224 (360)
T d1k32a3         147 PLKHGETDGYVMQAIHVYDMEGRKI-FAATTENSHDYAPAFDADSKN-LYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIP  224 (360)
T ss_dssp             EECSSTTCSCCEEEEEEEETTTTEE-EECSCSSSBEEEEEECTTSCE-EEEEESCCCCCEECSSSSCEECCSCBEEEEEE
T ss_pred             cccccceeeccccceeeeccccCce-eeecccccccccccccCCCCE-EEEEeCCCceEcccccccceeeccccceEEEe
Confidence            32        233466777766654 344567778899999999996 899999999999997654432       2223


Q ss_pred             ccccCeEEEEECCCCCEEEEEcCCC-----cEEEEeCCCCeeEEeccCCccccCeEEEEEccCC---CEEEEEECCCcEE
Q psy15995        270 EHSRFVQAVRYSPSGSHFASAGFDG-----KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDG---TQLLTASGDKTCK  341 (683)
Q Consensus       270 ~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~  341 (683)
                      .|...+..+.+++++..++++..+.     .+..++...+.......   +.+.+..+.+.+.+   .++++++.++.++
T Consensus       225 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  301 (360)
T d1k32a3         225 LIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIP---LESSILIYSVPVHGEFAAYYQGAPEKGVLL  301 (360)
T ss_dssp             SSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEE---CSSEEEEEECCCCCSHHHHHHCCCCCEEEE
T ss_pred             cccCccccceECCCcCcccccceeecccccceeecccCcCceeEeee---cCCCceEEEEEecCCCeeEEEecCCCCEEE
Confidence            3444455556677766555444322     24444444443322222   33334444443332   3456666677777


Q ss_pred             EEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEe
Q psy15995        342 LWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS  421 (683)
Q Consensus       342 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  421 (683)
                      +||+.+++.                                                ..|.+.|.+++|+|||++|++++
T Consensus       302 ~~d~~~~~~------------------------------------------------~~~~~~v~~~~~SpDG~~l~~~~  333 (360)
T d1k32a3         302 KYDVKTRKV------------------------------------------------TEVKNNLTDLRLSADRKTVMVRK  333 (360)
T ss_dssp             EEETTTCCE------------------------------------------------EEEEEEEEEEEECTTSCEEEEEE
T ss_pred             EEECCCCeE------------------------------------------------EEecCCcCEEEECCCCCEEEEEE
Confidence            777765432                                                22445688999999999999999


Q ss_pred             CCCcEEEEcCCCCCcceec
Q psy15995        422 HDGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       422 ~dg~i~~w~~~~~~~~~~~  440 (683)
                      .||.|++||+..++.....
T Consensus       334 ~Dg~i~v~d~~~~~~~~~~  352 (360)
T d1k32a3         334 DDGKIYTFPLEKPEDERTV  352 (360)
T ss_dssp             TTSCEEEEESSCTTSCEEC
T ss_pred             CCCeEEEEECCCCCcceEE
Confidence            9999999999998876655

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=2e-30  Score=252.90  Aligned_cols=317  Identities=15%  Similarity=0.152  Sum_probs=215.6

Q ss_pred             eeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEE----eccCCccccCeEEEEEc---c----CCCEEEEE
Q psy15995        266 MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVS----ELGNPAHKGGVYAVAWK---P----DGTQLLTA  334 (683)
Q Consensus       266 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~----~~~~~~~~~~i~~~~~~---~----~~~~l~~~  334 (683)
                      ...++|...|.++++++  +++++++.|++|++||..+.+...    ......|...+..+...   +    +...++++
T Consensus         8 ~~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~   85 (393)
T d1sq9a_           8 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT   85 (393)
T ss_dssp             EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred             ecCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEE
Confidence            34578999999999875  589999999999999976543211    11111133333333221   1    23467788


Q ss_pred             ECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCC-
Q psy15995        335 SGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPD-  413 (683)
Q Consensus       335 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-  413 (683)
                      +.||.+++|++.............                             .     .......+...+..+++.++ 
T Consensus        86 ~~dg~v~~w~~~~~~~~~~~~~~~-----------------------------~-----~~~~~~~~~~~~~~~~~~~~~  131 (393)
T d1sq9a_          86 SFSGDLLFYRITREDETKKVIFEK-----------------------------L-----DLLDSDMKKHSFWALKWGASN  131 (393)
T ss_dssp             ETTSCEEEEEEEECTTTCCEEEEE-----------------------------E-----CCSCTTGGGSCEEEEEEECCC
T ss_pred             eCCCcEEEEEccCCCceeeeeccc-----------------------------c-----ceeeeccCCCceEEEEEecCC
Confidence            889999999876443322111000                             0     00011224456677777765 


Q ss_pred             ----CCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCc
Q psy15995        414 ----RGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPR  489 (683)
Q Consensus       414 ----~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~  489 (683)
                          +.++++++.||.+++|++............+......+..                                    
T Consensus       132 ~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------  175 (393)
T d1sq9a_         132 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQG------------------------------------  175 (393)
T ss_dssp             ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEE------------------------------------
T ss_pred             CcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceeccc------------------------------------
Confidence                4678899999999999976544322221111111110000                                    


Q ss_pred             eeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCccee-----ecCC
Q psy15995        490 GLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE-----LDHL  564 (683)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~  564 (683)
                                             ...........+.+++++|++ +|++|+.|+.|++||+.+++......     .+|.
T Consensus       176 -----------------------~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~  231 (393)
T d1sq9a_         176 -----------------------TVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNS  231 (393)
T ss_dssp             -----------------------EECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCC
T ss_pred             -----------------------ceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeeccccccccccccccccccc
Confidence                                   000111123357889999997 88999999999999999887653322     3588


Q ss_pred             cCeeEEEECCCCCEEEEEeCCC---eEEEEECCCCccccccc-----------eeeecccEEEEEecCCCCeEEEeecCC
Q psy15995        565 GPVTDCSFSPSNEYLVASDAHR---KVVLYRVPDFELAHNKE-----------WGFHSAKVNCVAWSPDSALVASGSLDT  630 (683)
Q Consensus       565 ~~v~~~~~s~~~~~l~~~~~d~---~i~i~~~~~~~~~~~~~-----------~~~h~~~v~~~~~s~d~~~l~~~~~d~  630 (683)
                      .+|++++|+|||++|++|+.|+   .|++||+.+++.+....           ..+|.+.|++++|+||+++|++++.|+
T Consensus       232 ~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~  311 (393)
T d1sq9a_         232 NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG  311 (393)
T ss_dssp             CCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS
T ss_pred             ceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCC
Confidence            9999999999999999999887   49999999887654432           235999999999999999999999999


Q ss_pred             cEEEEeCCCCceeeEeecCCCC---------------------CCeeEEEEcc-----------CCeEEEeeCCCcEEEE
Q psy15995        631 TIIIWSLASPAKHIIIKNAHPQ---------------------SQITRLQWLD-----------NDLLVSVGQDCNTKIW  678 (683)
Q Consensus       631 ~v~iw~~~~~~~~~~~~~~~~~---------------------~~v~~l~~~~-----------~~~l~s~~~d~~v~vw  678 (683)
                      +|++||+++++++..+..  |.                     ..+.++.|.+           .+.|++++.|+.|++|
T Consensus       312 ~v~vWd~~~g~~~~~l~g--H~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ir~~  389 (393)
T d1sq9a_         312 KLRFWDVKTKERITTLNM--HCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF  389 (393)
T ss_dssp             EEEEEETTTTEEEEEEEC--CGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEE
T ss_pred             EEEEEECCCCCEEEEECC--cCCcccCCccEEEECCCCCEEEEcccceEEECccCceeccccCCCCEEEEEEcCCeEEEE
Confidence            999999999998887754  32                     3456677652           1368999999999999


Q ss_pred             ee
Q psy15995        679 EI  680 (683)
Q Consensus       679 ~~  680 (683)
                      +-
T Consensus       390 ~~  391 (393)
T d1sq9a_         390 RE  391 (393)
T ss_dssp             EE
T ss_pred             eC
Confidence            84

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=2.4e-30  Score=252.24  Aligned_cols=298  Identities=15%  Similarity=0.187  Sum_probs=198.6

Q ss_pred             ccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeec-cceEEE
Q psy15995         79 DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS-IGFYIA  157 (683)
Q Consensus        79 ~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~  157 (683)
                      ...++|.+.|.++++++  ++|+|++.|++|+|||..+.+.......... ...... ...+......+.... ++.+++
T Consensus         8 ~~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   83 (393)
T d1sq9a_           8 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYS-HFVHKS-GLHHVDVLQAIERDAFELCLVA   83 (393)
T ss_dssp             EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEE-EECCTT-CEEEEEEEEEEETTTEEEEEEE
T ss_pred             ecCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEe-eeeccC-CceEeeeEeeeccCCCCCcEEE
Confidence            34679999999999875  6899999999999999876543211110000 000000 000011112222222 345788


Q ss_pred             eecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEe
Q psy15995        158 SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDF  237 (683)
Q Consensus       158 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  237 (683)
                      +++.||.|++|++.............         ..                           ......+...+..+++
T Consensus        84 s~~~dg~v~~w~~~~~~~~~~~~~~~---------~~---------------------------~~~~~~~~~~~~~~~~  127 (393)
T d1sq9a_          84 TTSFSGDLLFYRITREDETKKVIFEK---------LD---------------------------LLDSDMKKHSFWALKW  127 (393)
T ss_dssp             EEETTSCEEEEEEEECTTTCCEEEEE---------EC---------------------------CSCTTGGGSCEEEEEE
T ss_pred             EEeCCCcEEEEEccCCCceeeeeccc---------cc---------------------------eeeeccCCCceEEEEE
Confidence            99999999999987653221111000         00                           0000112233444455


Q ss_pred             ecCCC----eEEEEeeCCCeEEEEcCCCCc------------------eeeeccccccCeEEEEECCCCCEEEEEcCCCc
Q psy15995        238 KPSRP----FRIITGSEDNTIAVFEGPPFK------------------FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGK  295 (683)
Q Consensus       238 ~~~~~----~~l~~~~~d~~i~iw~~~~~~------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  295 (683)
                      .++..    ..+++++.||.+++|++....                  .......+...+.+++|+|++ +|++|+.||+
T Consensus       128 ~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~  206 (393)
T d1sq9a_         128 GASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGT  206 (393)
T ss_dssp             ECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSE
T ss_pred             ecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCc
Confidence            44321    258889999999999864221                  111223455678999999998 8999999999


Q ss_pred             EEEEeCCCCeeEEeccC----CccccCeEEEEEccCCCEEEEEECCCc---EEEEECCCCceeeEEEecCcceeceEEEE
Q psy15995        296 VFLYDGASADLVSELGN----PAHKGGVYAVAWKPDGTQLLTASGDKT---CKLWDIETKSVVSEFIMGNQVEDQQVSCL  368 (683)
Q Consensus       296 i~iw~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~---i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  368 (683)
                      |++||+.+++.+..+..    ..|..+|.+++|+|++++|++++.|+.   +++||+++++.+..+......        
T Consensus       207 i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~--------  278 (393)
T d1sq9a_         207 VQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHS--------  278 (393)
T ss_dssp             EEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-----------
T ss_pred             EEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeecccccc--------
Confidence            99999999988765543    248899999999999999999999875   899999999887765322110        


Q ss_pred             ecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcce
Q psy15995        369 WQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQI  448 (683)
Q Consensus       369 ~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v  448 (683)
                                             ......+.+|...|++++|+|++++|++++.|++|++||+++++.+..+ .+|...|
T Consensus       279 -----------------------~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l-~gH~~~v  334 (393)
T d1sq9a_         279 -----------------------SQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTL-NMHCDDI  334 (393)
T ss_dssp             ----------------------------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-ECCGGGC
T ss_pred             -----------------------ccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEE-CCcCCcc
Confidence                                   2233456789999999999999999999999999999999999887776 5676655


Q ss_pred             e
Q psy15995        449 N  449 (683)
Q Consensus       449 ~  449 (683)
                      .
T Consensus       335 ~  335 (393)
T d1sq9a_         335 E  335 (393)
T ss_dssp             S
T ss_pred             c
Confidence            3

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.98  E-value=1.4e-31  Score=258.90  Aligned_cols=194  Identities=14%  Similarity=0.086  Sum_probs=167.2

Q ss_pred             eeEeec-cceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceee
Q psy15995        146 NILVLS-IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGE  224 (683)
Q Consensus       146 ~~~~s~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  224 (683)
                      .-.||| ||+++|+++ +|.|++||+.+++...   . .|...|.+++|+|||+.|++++.+....+.+|+.++++. ..
T Consensus         7 ~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~---~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~-~~   80 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK---V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA-EK   80 (360)
T ss_dssp             EEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE---C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE-EE
T ss_pred             cccccCCCCCEEEEEE-CCeEEEEECCCCcEEE---c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcE-EE
Confidence            356999 999999986 5799999998876543   2 477899999999999999999888777788888877654 46


Q ss_pred             eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEc----------CCC
Q psy15995        225 ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAG----------FDG  294 (683)
Q Consensus       225 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg  294 (683)
                      +..|...|.+++|+|++++ +++++.++.+++|+..+++....+..|...+.+++|+|+|++|+.+.          .++
T Consensus        81 ~~~~~~~v~~~~~spdg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~  159 (360)
T d1k32a3          81 FEENLGNVFAMGVDRNGKF-AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ  159 (360)
T ss_dssp             CCCCCCSEEEEEECTTSSE-EEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEE
T ss_pred             eeCCCceEEeeeecccccc-cceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeecccc
Confidence            7889999999999999996 99999999999999999999999999999999999999999998654          345


Q ss_pred             cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCc
Q psy15995        295 KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       295 ~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      .+++|+..+++......   +...+..++|+|+|++|++++.++.+++|+.....
T Consensus       160 ~~~v~d~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~  211 (360)
T d1k32a3         160 AIHVYDMEGRKIFAATT---ENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLN  211 (360)
T ss_dssp             EEEEEETTTTEEEECSC---SSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSC
T ss_pred             ceeeeccccCceeeecc---cccccccccccCCCCEEEEEeCCCceEcccccccc
Confidence            69999999887766554   67788999999999999999999999999976544

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.3e-30  Score=242.36  Aligned_cols=284  Identities=21%  Similarity=0.246  Sum_probs=224.2

Q ss_pred             ccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEE
Q psy15995         77 ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYI  156 (683)
Q Consensus        77 ~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  156 (683)
                      .++.+.+|...|+|++  +||++||||+.||+|+|||+.+++.+..+..|.              ..|.+++|  ++++|
T Consensus         7 ~i~~~~~~~~~V~c~~--~d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~--------------~~V~~v~~--~~~~l   68 (293)
T d1p22a2           7 RIHCRSETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHT--------------GSVLCLQY--DERVI   68 (293)
T ss_dssp             CEECCCSSCCCEEEEE--CCSSEEEEEESSSCEEEEESSSCCEEEEECCCS--------------SCEEEEEC--CSSEE
T ss_pred             EEeccCCCCCCEEEEE--EcCCEEEEEeCCCeEEEEECCCCcEEEEEecCC--------------CCEeeeec--cccee
Confidence            3445668899999976  589999999999999999999999998887775              66777665  68899


Q ss_pred             EeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCc---eeeeecCCcCeE
Q psy15995        157 ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTS---VGEISGQSKPIN  233 (683)
Q Consensus       157 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~  233 (683)
                      ++|+.|+.|++|++..+........    .......+.+....++++.....  ..+|+......   ...+..|...+.
T Consensus        69 ~s~s~D~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~  142 (293)
T d1p22a2          69 ITGSSDSTVRVWDVNTGEMLNTLIH----HCEAVLHLRFNNGMMVTCSKDRS--IAVWDMASPTDITLRRVLVGHRAAVN  142 (293)
T ss_dssp             EEEETTSCEEEEESSSCCEEEEECC----CCSCEEEEECCTTEEEEEETTSC--EEEEECSSSSCCEEEEEECCCSSCEE
T ss_pred             ecccccccccccccccccccccccc----cccccccccccccceeecccccc--eeEeeccccccccccccccccccccc
Confidence            9999999999999998875543332    22334445556666777666554  57777775543   445677888898


Q ss_pred             EEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCC
Q psy15995        234 SCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP  313 (683)
Q Consensus       234 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~  313 (683)
                      .+.+.+.   .+++++.|+.+++||..+++.+..+.++...+..+.++  +..+++++.||.|++||+++...+..... 
T Consensus       143 ~~~~~~~---~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-  216 (293)
T d1p22a2         143 VVDFDDK---YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEG-  216 (293)
T ss_dssp             EEEEETT---EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECC-
T ss_pred             cceeccc---ccccccCCCceeeecCCCCcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEecccceeeeeecc-
Confidence            8888776   48899999999999999999999999999999888775  56899999999999999999999888765 


Q ss_pred             ccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCc
Q psy15995        314 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPST  393 (683)
Q Consensus       314 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~  393 (683)
                       +...+..  +.+++.+|++++.||.|++||+.........                                   ....
T Consensus       217 -~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~-----------------------------------~~~~  258 (293)
T d1p22a2         217 -HEELVRC--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAP-----------------------------------AGTL  258 (293)
T ss_dssp             -CSSCEEE--EECCSSEEEEEETTSCEEEEEHHHHTSTTSC-----------------------------------TTTT
T ss_pred             -cceeeee--ccccceEEEEEcCCCEEEEEECCCCcccccc-----------------------------------CCce
Confidence             7777765  5567889999999999999998654322110                                   0123


Q ss_pred             ceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEc
Q psy15995        394 PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN  430 (683)
Q Consensus       394 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~  430 (683)
                      .+..+.+|.+.|++++|+  +++|++++.||+|++||
T Consensus       259 ~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         259 CLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             EEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             eeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence            445678899999999984  57899999999999998

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.97  E-value=4.6e-30  Score=251.26  Aligned_cols=357  Identities=16%  Similarity=0.125  Sum_probs=253.9

Q ss_pred             cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeec
Q psy15995         63 NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLT  142 (683)
Q Consensus        63 ~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (683)
                      .++.|.|||.++++.++.+..|. .+..++|||||++|++++.|+.|++||+.+++.....+....         ..+..
T Consensus        40 d~g~v~v~D~~t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~---------~~~~~  109 (432)
T d1qksa2          40 DAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG---------SEARS  109 (432)
T ss_dssp             TTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC---------SEEEE
T ss_pred             CCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecC---------CCCCC
Confidence            57899999999999999998774 699999999999999999999999999988764322221110         01224


Q ss_pred             ceeeeEeeccceEE-EeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCc
Q psy15995        143 SIRNILVLSIGFYI-ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTS  221 (683)
Q Consensus       143 ~i~~~~~s~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~  221 (683)
                      .+.+..|+|||++| +++..++.|++||..+++.+......  ...+....+.++++                       
T Consensus       110 ~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~--~~~~~~~~~~~~~~-----------------------  164 (432)
T d1qksa2         110 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTR--GMTYDEQEYHPEPR-----------------------  164 (432)
T ss_dssp             EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECC--EECTTTCCEESCCC-----------------------
T ss_pred             eEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccC--CccccceeccCCCc-----------------------
Confidence            55667889999976 67888999999999998866443322  23333334444433                       


Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc-ccccCeEEEEECCCCCEEEEEcC-CCcEEEE
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ-EHSRFVQAVRYSPSGSHFASAGF-DGKVFLY  299 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw  299 (683)
                                ...+.++|+++..+++...++.|.+|+..+.+...... .+...+..++|+|+|+++++++. ++.+.++
T Consensus       165 ----------~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~  234 (432)
T d1qksa2         165 ----------VAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVI  234 (432)
T ss_dssp             ----------EEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred             ----------eeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEe
Confidence                      34466778888767888889999999988876554333 35567889999999998776665 5679999


Q ss_pred             eCCCCeeEEeccCC---ccccCeEEEEEccCCCEEEEEE-CCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEE
Q psy15995        300 DGASADLVSELGNP---AHKGGVYAVAWKPDGTQLLTAS-GDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLL  375 (683)
Q Consensus       300 ~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  375 (683)
                      |..+++....+...   .|........+...+....+.. .++.+.+|+.....                          
T Consensus       235 d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~--------------------------  288 (432)
T d1qksa2         235 DTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEG--------------------------  288 (432)
T ss_dssp             ETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTT--------------------------
T ss_pred             ecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEeccccccc--------------------------
Confidence            99998887665431   1333444444444444333332 25566666544321                          


Q ss_pred             EEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeC
Q psy15995        376 TVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATG  455 (683)
Q Consensus       376 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~  455 (683)
                                            ...|...+....++|++..+++++.+...++|+..+.......               
T Consensus       289 ----------------------~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~---------------  331 (432)
T d1qksa2         289 ----------------------HPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEI---------------  331 (432)
T ss_dssp             ----------------------CTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHH---------------
T ss_pred             ----------------------ccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCe---------------
Confidence                                  1235667888899999999999999999999976543221100               


Q ss_pred             CeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCE
Q psy15995        456 ELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGL  535 (683)
Q Consensus       456 ~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  535 (683)
                                                                                          ...+++ ||++.
T Consensus       332 --------------------------------------------------------------------~~sv~v-pDg~~  342 (432)
T d1qksa2         332 --------------------------------------------------------------------SGSVAV-FDIKA  342 (432)
T ss_dssp             --------------------------------------------------------------------HTCEEE-EEGGG
T ss_pred             --------------------------------------------------------------------eeEEEE-Eechh
Confidence                                                                                123444 78889


Q ss_pred             EEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEe-----CCCeEEEEECCCCcccc
Q psy15995        536 VAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASD-----AHRKVVLYRVPDFELAH  600 (683)
Q Consensus       536 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----~d~~i~i~~~~~~~~~~  600 (683)
                      +++++.|+.+++|++.+...+    ..|...+.+++|||||++++.+.     .++.|.|||..+.++..
T Consensus       343 la~~s~d~~~k~w~~~~~~~l----~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~~  408 (432)
T d1qksa2         343 MTGDGSDPEFKTLPIAEWAGI----TEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKH  408 (432)
T ss_dssp             CCCSSSCCCEEEECHHHHHTC----CSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred             hcccccCCceEeccccccccc----CCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceEEe
Confidence            999999999999998655332    24667899999999999886653     56889999999998754

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=4.5e-29  Score=239.16  Aligned_cols=299  Identities=15%  Similarity=0.105  Sum_probs=217.3

Q ss_pred             eEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEE
Q psy15995        306 LVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY  385 (683)
Q Consensus       306 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~  385 (683)
                      .++...  +|...|++|+|+|++++|++++.||+|++||++.+.....+                               
T Consensus         3 ~v~~~~--~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~-------------------------------   49 (342)
T d1yfqa_           3 IVQIEQ--APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDL-------------------------------   49 (342)
T ss_dssp             EEECSS--CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEE-------------------------------
T ss_pred             eEEcCC--CCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEE-------------------------------
Confidence            344443  49999999999999999999999999999999876543322                               


Q ss_pred             EecCCCCcceeeeeeccccEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEE--eCCeEEEEE
Q psy15995        386 LDVNNPSTPIRVIKGHNKPITALALSPDR-GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKA--TGELLYTCG  462 (683)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~  462 (683)
                                ....+|..+|.+++|+|++ .+|++|+.||.|++|++............+.........  ....+++++
T Consensus        50 ----------~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (342)
T d1yfqa_          50 ----------LQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAAS  119 (342)
T ss_dssp             ----------EEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEE
T ss_pred             ----------EEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeecccccccccccccccccccccccccccccccccc
Confidence                      2234689999999999865 578999999999999999887776665444433333322  388999999


Q ss_pred             cCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCC
Q psy15995        463 IDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGAD  542 (683)
Q Consensus       463 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d  542 (683)
                      .++.+++||++...........                              ..............+.+++..+++++.|
T Consensus       120 ~~~~~~~wd~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~d  169 (342)
T d1yfqa_         120 WDGLIEVIDPRNYGDGVIAVKN------------------------------LNSNNTKVKNKIFTMDTNSSRLIVGMNN  169 (342)
T ss_dssp             TTSEEEEECHHHHTTBCEEEEE------------------------------SCSSSSSSCCCEEEEEECSSEEEEEEST
T ss_pred             cccccceeeccccccceeeecc------------------------------cccccccceeeeeeeeccCCceeeecCC
Confidence            9999999998654321111000                              0001122234567788899999999999


Q ss_pred             CcEEEEEcCCCccCcceee--cCCcCeeEEEEC-CCCCEEEEEeCCCeEEEEECCCCccccc-------------cceee
Q psy15995        543 SKVHIYELNNKSLSPKAEL--DHLGPVTDCSFS-PSNEYLVASDAHRKVVLYRVPDFELAHN-------------KEWGF  606 (683)
Q Consensus       543 g~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~s-~~~~~l~~~~~d~~i~i~~~~~~~~~~~-------------~~~~~  606 (683)
                      +.|++|++...........  .....+.+..+. .++..+++++.||.+.+|+.........             .....
T Consensus       170 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (342)
T d1yfqa_         170 SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN  249 (342)
T ss_dssp             TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCS
T ss_pred             CcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCc
Confidence            9999999987765543332  244445555554 4788999999999999999875332211             11123


Q ss_pred             ecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCCeEEEeeCCCcEEEEee
Q psy15995        607 HSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DNDLLVSVGQDCNTKIWEI  680 (683)
Q Consensus       607 h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~v~vw~~  680 (683)
                      |...|++++|+|++++||+|+.||.|++||+++++.+..+.. +|  .+..++|+ ++++|++++.|+.+++|..
T Consensus       250 ~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~-~~--~~~~~~~s~~~~~l~~a~sdd~~~~~~~  321 (342)
T d1yfqa_         250 LAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK-FN--EDSVVKIACSDNILCLATSDDTFKTNAA  321 (342)
T ss_dssp             SCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC-CS--SSEEEEEEECSSEEEEEEECTHHHHCSS
T ss_pred             ccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecC-CC--CCEEEEEEeCCCEEEEEEcCCcEEEeee
Confidence            677899999999999999999999999999999988776643 23  34455666 6678888888887776654

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.1e-29  Score=243.57  Aligned_cols=310  Identities=13%  Similarity=0.144  Sum_probs=214.5

Q ss_pred             ceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEecc-CCccccCeEEEEEccC-CCEEEEEECCCcE
Q psy15995        263 KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG-NPAHKGGVYAVAWKPD-GTQLLTASGDKTC  340 (683)
Q Consensus       263 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i  340 (683)
                      +.+...++|.+.|++++|+|++++||+++.||+|++||+.++.....+. ...|..+|.+++|+|+ +.+|++++.||.+
T Consensus         2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v   81 (342)
T d1yfqa_           2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI   81 (342)
T ss_dssp             EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCE
T ss_pred             CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccce
Confidence            4567788999999999999999999999999999999987654322221 1238999999999986 4578999999999


Q ss_pred             EEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeee---e--ccccEEEEEEeCCCC
Q psy15995        341 KLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIK---G--HNKPITALALSPDRG  415 (683)
Q Consensus       341 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~---~--~~~~v~~~~~~~~~~  415 (683)
                      ++|++.......................++...+++++.++.+++||++..........   .  .........+.+++.
T Consensus        82 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (342)
T d1yfqa_          82 LKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSS  161 (342)
T ss_dssp             EEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSS
T ss_pred             eeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCC
Confidence            99999988877666555555555666677899999999999999999865433222221   1  122345567788889


Q ss_pred             EEEEEeCCCcEEEEcCCCCCcceecc--CCCCcceeEEEEe---CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCce
Q psy15995        416 TVFTGSHDGFITRWNAKTGENDRVQG--AGHGNQINGMKAT---GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRG  490 (683)
Q Consensus       416 ~l~~~~~dg~i~~w~~~~~~~~~~~~--~~~~~~v~~~~~~---~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~  490 (683)
                      .+++++.|+.|++|++..........  ........+....   +..+++++.||.+.+|++.........         
T Consensus       162 ~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~---------  232 (342)
T d1yfqa_         162 RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNS---------  232 (342)
T ss_dssp             EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTC---------
T ss_pred             ceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeec---------
Confidence            99999999999999998766543321  1122222222221   344445555555555544332110000         


Q ss_pred             eeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEE
Q psy15995        491 LDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDC  570 (683)
Q Consensus       491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~  570 (683)
                                                                          .....+...   ........|...++++
T Consensus       233 ----------------------------------------------------~~~~~~~~~---~~~~~~~~~~~~v~~l  257 (342)
T d1yfqa_         233 ----------------------------------------------------SKRFAFRCH---RLNLKDTNLAYPVNSI  257 (342)
T ss_dssp             ----------------------------------------------------TTCEEEECC---CCCTTCCSSCCCEEEE
T ss_pred             ----------------------------------------------------cccceeeee---eeccCCCcccccceeE
Confidence                                                                000000000   0001122466789999


Q ss_pred             EECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCC
Q psy15995        571 SFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLAS  639 (683)
Q Consensus       571 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~  639 (683)
                      +|+|++++||+|+.||.|++||+.+++.+....   +...+..++|+|++++|++++.|+.+++|....
T Consensus       258 ~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~---~~~~~~~~~~s~~~~~l~~a~sdd~~~~~~~~~  323 (342)
T d1yfqa_         258 EFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA---KFNEDSVVKIACSDNILCLATSDDTFKTNAAID  323 (342)
T ss_dssp             EECTTTCCEEEEETTSCEEEEETTTTEEEEECC---CCSSSEEEEEEECSSEEEEEEECTHHHHCSSSC
T ss_pred             EecCCccEEEEECCCCEEEEEECCCCcEEEEec---CCCCCEEEEEEeCCCEEEEEEcCCcEEEeeeeC
Confidence            999999999999999999999999998775543   234456678888999999999999998887643

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.3e-28  Score=226.68  Aligned_cols=286  Identities=17%  Similarity=0.272  Sum_probs=225.6

Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEe
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD  300 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~  300 (683)
                      .+.....|...|+|++|  +++ +|++|+.||+|++||+.+++.+..+.+|...|.+++|  ++++|++++.|+.|++|+
T Consensus         7 ~i~~~~~~~~~V~c~~~--d~~-~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~   81 (293)
T d1p22a2           7 RIHCRSETSKGVYCLQY--DDQ-KIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWD   81 (293)
T ss_dssp             CEECCCSSCCCEEEEEC--CSS-EEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEE
T ss_pred             EEeccCCCCCCEEEEEE--cCC-EEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeecccccccccccc
Confidence            34455678888998765  566 4999999999999999999999999999999999887  567999999999999999


Q ss_pred             CCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecC
Q psy15995        301 GASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS  380 (683)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  380 (683)
                      +..+........  +..  ....+.+....++++..++.+.+|+........................+....+++++.+
T Consensus        82 ~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d  157 (293)
T d1p22a2          82 VNTGEMLNTLIH--HCE--AVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD  157 (293)
T ss_dssp             SSSCCEEEEECC--CCS--CEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT
T ss_pred             cccccccccccc--ccc--ccccccccccceeecccccceeEeeccccccccccccccccccccccceecccccccccCC
Confidence            999988777653  222  2334555677899999999999999998776555544444445555666788899999999


Q ss_pred             CcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEE
Q psy15995        381 GFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYT  460 (683)
Q Consensus       381 g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  460 (683)
                      +.+++||... .+.+..+.++...+..+.++  +..+++++.||.|++||+++....... ..+...+..+...+.+|++
T Consensus       158 ~~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~l~s  233 (293)
T d1p22a2         158 RTIKVWNTST-CEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRFDNKRIVS  233 (293)
T ss_dssp             SEEEEEETTT-CCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEECCSSEEEE
T ss_pred             CceeeecCCC-CcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEecccceeeeee-cccceeeeeccccceEEEE
Confidence            9999999987 45567788888888887775  468999999999999999998887766 5677888888888999999


Q ss_pred             EEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeee-ecCCCCCcEEEEccCCCEEEEE
Q psy15995        461 CGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSS-LPIDYEPSSISLDHEHGLVAVG  539 (683)
Q Consensus       461 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~  539 (683)
                      ++.||.|++||+..........                            ....... ..+...+.+++++  +++|+++
T Consensus       234 g~~dg~i~iwd~~~~~~~~~~~----------------------------~~~~~~~~~~H~~~V~~v~~d--~~~l~s~  283 (293)
T d1p22a2         234 GAYDGKIKVWDLVAALDPRAPA----------------------------GTLCLRTLVEHSGRVFRLQFD--EFQIVSS  283 (293)
T ss_dssp             EETTSCEEEEEHHHHTSTTSCT----------------------------TTTEEEEECCCSSCCCCEEEC--SSCEEEC
T ss_pred             EcCCCEEEEEECCCCccccccC----------------------------CceeeEEecCCCCCEEEEEEc--CCEEEEE
Confidence            9999999999976543211100                            0011112 2356678888884  6789999


Q ss_pred             cCCCcEEEEE
Q psy15995        540 GADSKVHIYE  549 (683)
Q Consensus       540 ~~dg~i~i~d  549 (683)
                      +.||+|++||
T Consensus       284 s~Dg~i~iWD  293 (293)
T d1p22a2         284 SHDDTILIWD  293 (293)
T ss_dssp             CSSSEEEEEC
T ss_pred             ecCCEEEEeC
Confidence            9999999997

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=1.4e-28  Score=242.03  Aligned_cols=341  Identities=13%  Similarity=0.075  Sum_probs=240.3

Q ss_pred             eCCCCCe--EEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccC
Q psy15995         52 GDPKGKN--FLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPI  128 (683)
Q Consensus        52 ~s~~~~~--l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~  128 (683)
                      +++|.+.  +++. .++.|.|||+.+++.+.++..|. .+..++|||||++|++++.|++|++||+.+++.....+....
T Consensus        26 ~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~  104 (426)
T d1hzua2          26 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG  104 (426)
T ss_dssp             SCCCGGGEEEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC
T ss_pred             ccCCCCeEEEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCC
Confidence            5666553  3334 57999999999999999999775 589999999999999999999999999999875443332211


Q ss_pred             CCCcccceeeeeecceeeeEeeccceEEEe-ecCCccEEEEeccccceeeecccc---------ccCCCeeEEEEcCCCC
Q psy15995        129 GGPIKDIGTLLSLTSIRNILVLSIGFYIAS-GDISGKVRIWDTVNKEHILKNEFH---------PIGGPIKDIAWSPDNQ  198 (683)
Q Consensus       129 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~---------~~~~~i~~~~~s~~~~  198 (683)
                               ..+...+.+++|+|||++|++ +..++.+++||..+++........         ...+....+.+++++.
T Consensus       105 ---------~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~  175 (426)
T d1hzua2         105 ---------IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP  175 (426)
T ss_dssp             ---------SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSS
T ss_pred             ---------CCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCC
Confidence                     012245667889999998755 457899999999998755433211         1334566778888888


Q ss_pred             eEEEEecCCceEEEEEEccCCC-ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccc--cccCe
Q psy15995        199 RMVVVGEGRERFGHVFMSETGT-SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQE--HSRFV  275 (683)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~--~~~~v  275 (683)
                      .++....+... +.++...... ......++...+..+.|+|++++++++...+..+.+++..+++.......  +....
T Consensus       176 ~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (426)
T d1hzua2         176 EFIVNVKETGK-VLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPG  254 (426)
T ss_dssp             EEEEEETTTTE-EEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCS
T ss_pred             EEEEecCCCCe-EEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCccccc
Confidence            88877766543 2333333333 33345578888999999999998777777888999999999887765542  22222


Q ss_pred             EEEEECCCCC--E-EEEEcCCCcEEEEeCCC-------CeeEEeccCCccccCeEEEEEccCCCEEEE-------EECCC
Q psy15995        276 QAVRYSPSGS--H-FASAGFDGKVFLYDGAS-------ADLVSELGNPAHKGGVYAVAWKPDGTQLLT-------ASGDK  338 (683)
Q Consensus       276 ~~~~~~~~~~--~-l~~~~~dg~i~iw~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-------~~~dg  338 (683)
                      ....+...+.  . .+....|+.+.+|+...       ++....+..  |...+..++|+||+++|++       +..++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g--~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~  332 (426)
T d1hzua2         255 RGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG--QGGGSLFIKTHPKSSHLYVDTTFNPDARISQ  332 (426)
T ss_dssp             CCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEEC--SSSCCCCEECCTTCSEEEECCTTCSSHHHHT
T ss_pred             ceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEec--CCCceeEEEcCCCCceEEEeecCCCCcccCC
Confidence            3333333332  1 22334577777777544       356666654  8899999999999999995       34578


Q ss_pred             cEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEE
Q psy15995        339 TCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVF  418 (683)
Q Consensus       339 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  418 (683)
                      +|++||+.+++...++....                                   ....+..|...+..++|+|||++++
T Consensus       333 tv~vwd~~t~~~~~~~~~~~-----------------------------------~~~~~~~~~~rv~~~~fSpDGk~i~  377 (426)
T d1hzua2         333 SVAVFDLKNLDAKYQVLPIA-----------------------------------EWADLGEGAKRVVQPEYNKRGDEVW  377 (426)
T ss_dssp             CEEEEETTCTTSCCEEECHH-----------------------------------HHHCCCSSCCCEEEEEECSSSSEEE
T ss_pred             EEEEEECCCCCcCeEEeccc-----------------------------------hhcccCCCCccEEEEEECCCCCEEE
Confidence            89999999988765542110                                   0112334667799999999999775


Q ss_pred             EE-----eCCCcEEEEcCCCCCcceec
Q psy15995        419 TG-----SHDGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       419 ~~-----~~dg~i~~w~~~~~~~~~~~  440 (683)
                      .+     +.++.|++||..+.+.....
T Consensus       378 vs~~~~~~~~~~i~v~D~~T~k~~~~i  404 (426)
T d1hzua2         378 FSVWNGKNDSSALVVVDDKTLKLKAVV  404 (426)
T ss_dssp             EEECCCTTSCCEEEEEETTTTEEEEEE
T ss_pred             EEEecCCCCCCeEEEEECCCCeEEEEE
Confidence            43     35788999999998876655

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.96  E-value=8.5e-28  Score=235.05  Aligned_cols=351  Identities=12%  Similarity=0.049  Sum_probs=256.0

Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCee--EEeccC-CccccCeE
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL--VSELGN-PAHKGGVY  320 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~-~~~~~~i~  320 (683)
                      ++++.+.+|+|.+||..+++.+..+..+ ..+..++|+|||+++++++.|+.+++||+.+++.  ...+.. ..|.+.+.
T Consensus        34 ~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~  112 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIET  112 (432)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEE
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEE
Confidence            4689999999999999999999999877 4699999999999999999999999999988763  333321 23556667


Q ss_pred             EEEEccCCCEE-EEEECCCcEEEEECCCCceeeEEEecC----------cceeceEEEEecCCEE-EEEecCCcEEEEec
Q psy15995        321 AVAWKPDGTQL-LTASGDKTCKLWDIETKSVVSEFIMGN----------QVEDQQVSCLWQGDYL-LTVSLSGFISYLDV  388 (683)
Q Consensus       321 ~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l-~~~~~~g~i~~~~~  388 (683)
                      +..|+|||++| +++..++.+++||..+++.+..+....          ......+.+++++..+ ++...++.+.+|+.
T Consensus       113 s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~  192 (432)
T d1qksa2         113 SKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDY  192 (432)
T ss_dssp             CCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEET
T ss_pred             ecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEc
Confidence            77788999986 667789999999999999887765322          1223345667777765 45566789999998


Q ss_pred             CCCCcceeeeeeccccEEEEEEeCCCCEEEEEeC-CCcEEEEcCCCCCcceeccCC----CCcceeEEEEe-CCeEEEEE
Q psy15995        389 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSH-DGFITRWNAKTGENDRVQGAG----HGNQINGMKAT-GELLYTCG  462 (683)
Q Consensus       389 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~w~~~~~~~~~~~~~~----~~~~v~~~~~~-~~~l~~~~  462 (683)
                      ..........-.+...+..++|+|+|+++++++. ++.+.++|..+.+.......+    +.......... ...+....
T Consensus       193 ~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~  272 (432)
T d1qksa2         193 TDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATS  272 (432)
T ss_dssp             TCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEE
T ss_pred             cCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceeccc
Confidence            8754432222345667889999999998877665 557899999888776554322    22333333333 23333333


Q ss_pred             c--CCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEc
Q psy15995        463 I--DDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGG  540 (683)
Q Consensus       463 ~--d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  540 (683)
                      .  ++.+.+|+.......                                        .+...+....++|++..+++++
T Consensus       273 ~lg~~~v~~~~~~~~~~~----------------------------------------~~~~~v~~~~~~~~g~~~~~~s  312 (432)
T d1qksa2         273 HMGDDSVALIGTDPEGHP----------------------------------------DNAWKILDSFPALGGGSLFIKT  312 (432)
T ss_dssp             BSSSSEEEEEECCTTTCT----------------------------------------TTBTSEEEEEECSCSCCCCEEC
T ss_pred             ccCCceEEeccccccccc----------------------------------------ccccEEEEEEEcCCCCeEEEEe
Confidence            3  678888876543221                                        1223456778899999999999


Q ss_pred             CCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCC
Q psy15995        541 ADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDS  620 (683)
Q Consensus       541 ~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~  620 (683)
                      .+...++|+......       +.....++++ ||++.|++++.|+.+++|++.++..+.     .|...+.+++|||||
T Consensus       313 ~p~~~~lw~~~~~~~-------~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~~l~-----~~~~~v~~~~fS~DG  379 (432)
T d1qksa2         313 HPNSQYLYVDATLNP-------EAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWAGIT-----EGQPRVVQGEFNKDG  379 (432)
T ss_dssp             CTTCSEEEEECTTCS-------SHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHHTCC-----SSCCEEEEEEECTTS
T ss_pred             cCCccceeecccCCC-------CCCeeeEEEE-EechhhcccccCCceEecccccccccC-----CCCCcEEEeEECCCC
Confidence            999999998765432       2222344555 899999999999999999986553332     267789999999999


Q ss_pred             CeEEEee-----cCCcEEEEeCCCCceeeEeec
Q psy15995        621 ALVASGS-----LDTTIIIWSLASPAKHIIIKN  648 (683)
Q Consensus       621 ~~l~~~~-----~d~~v~iw~~~~~~~~~~~~~  648 (683)
                      ++|+...     .+|.|.|||..+.+....++.
T Consensus       380 ~~v~~S~~~~~~~~g~i~i~D~~T~k~~~~i~~  412 (432)
T d1qksa2         380 TEVWFSVWNGKDQESALVVVDDKTLELKHVIKD  412 (432)
T ss_dssp             SEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred             CEEEEEEecCCCCCCcEEEEECCCceEEeEecC
Confidence            9885543     478899999999988776644

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=8.4e-28  Score=236.46  Aligned_cols=296  Identities=10%  Similarity=0.042  Sum_probs=203.2

Q ss_pred             EEECCCCc--EEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEE
Q psy15995         91 AKYSPSGF--YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIW  168 (683)
Q Consensus        91 ~~~s~d~~--~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw  168 (683)
                      ..++.|.+  ++++.+.||+|+|||+.+++.+.++..+               ..+..++|||||++|++++.|++|++|
T Consensus        24 ~~~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g---------------~~~~~vafSPDGk~l~~~~~d~~v~vw   88 (426)
T d1hzua2          24 QLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG---------------YAVHISRMSASGRYLLVIGRDARIDMI   88 (426)
T ss_dssp             CCSCCCGGGEEEEEETTTTEEEEEETTTCSEEEEEECC---------------SSEEEEEECTTSCEEEEEETTSEEEEE
T ss_pred             ccccCCCCeEEEEEEcCCCEEEEEECCCCcEEEEEeCC---------------CCeeEEEECCCCCEEEEEeCCCCEEEE
Confidence            34556543  5678889999999999999998887765               457889999999999999999999999


Q ss_pred             eccccceeeecccc---ccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEE---------
Q psy15995        169 DTVNKEHILKNEFH---PIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCD---------  236 (683)
Q Consensus       169 d~~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---------  236 (683)
                      |+.+++......+.   .+.+.+.+++|+|||+++++++.... .+.+|+..++.....+..|...+....         
T Consensus        89 d~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~-~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (426)
T d1hzua2          89 DLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP-QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAA  167 (426)
T ss_dssp             ETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESS-EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEE
T ss_pred             EccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCC-eEEEEcCCccceeEEeeccCCCccceeecCCCceeE
Confidence            99988754433332   34455677888999999887764433 368899999888888777665554444         


Q ss_pred             --eecCCCeEEEEeeCCCeEEEEcCCCCce-eeeccccccCeEEEEECCCCCEEEEEc-CCCcEEEEeCCCCeeEEeccC
Q psy15995        237 --FKPSRPFRIITGSEDNTIAVFEGPPFKF-KMTKQEHSRFVQAVRYSPSGSHFASAG-FDGKVFLYDGASADLVSELGN  312 (683)
Q Consensus       237 --~~~~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~  312 (683)
                        +++++...+++....+.+.+++...... ......+...+..++++|++++++++. .+..+.+++..+++.+.....
T Consensus       168 i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  247 (426)
T d1hzua2         168 IIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV  247 (426)
T ss_dssp             EEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEEC
T ss_pred             EEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEecc
Confidence              4444444333344444555554443332 223345677889999999999877665 456799999999998877654


Q ss_pred             CccccCeEEEEEccCCCE-EE--EEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecC
Q psy15995        313 PAHKGGVYAVAWKPDGTQ-LL--TASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVN  389 (683)
Q Consensus       313 ~~~~~~i~~~~~~~~~~~-l~--~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~  389 (683)
                      ..+........+...+.. ..  ....++.+.+|+.........                                    
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~------------------------------------  291 (426)
T d1hzua2         248 GKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQY------------------------------------  291 (426)
T ss_dssp             SSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTT------------------------------------
T ss_pred             CCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccc------------------------------------
Confidence            333333334444433332 22  223466777777654422100                                    


Q ss_pred             CCCcceeeeeeccccEEEEEEeCCCCEEEE-------EeCCCcEEEEcCCCCCccee
Q psy15995        390 NPSTPIRVIKGHNKPITALALSPDRGTVFT-------GSHDGFITRWNAKTGENDRV  439 (683)
Q Consensus       390 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-------~~~dg~i~~w~~~~~~~~~~  439 (683)
                       ..+....+.+|...+..++|+|++++|++       ++.+++|++||+.+++....
T Consensus       292 -~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~  347 (426)
T d1hzua2         292 -AWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQ  347 (426)
T ss_dssp             -BTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCE
T ss_pred             -cceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeE
Confidence             02334567889999999999999999995       45577899999888775443

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.95  E-value=2e-24  Score=202.33  Aligned_cols=271  Identities=16%  Similarity=0.180  Sum_probs=215.0

Q ss_pred             cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEE-EEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeee
Q psy15995         63 NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSL  141 (683)
Q Consensus        63 ~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l-as~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (683)
                      .++.|.|||+++++.++++... ..+..++|||||++| ++++.++.|++||+.+++.+..+..+               
T Consensus        10 ~~~~v~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~---------------   73 (301)
T d1l0qa2          10 ESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG---------------   73 (301)
T ss_dssp             TTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS---------------
T ss_pred             CCCEEEEEECCCCeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecc---------------
Confidence            5789999999999999888744 457899999999988 56778899999999999887766554               


Q ss_pred             cceeeeEeeccceEEE-eecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC
Q psy15995        142 TSIRNILVLSIGFYIA-SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT  220 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~  220 (683)
                      ..+..+++++++.+++ ++..++.+.+|+..+++.......   ......++|+|+++.+++...... ...+++..++.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dg~~~~~~~~~~~-~~~~~~~~~~~  149 (301)
T d1l0qa2          74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT---GKSPLGLALSPDGKKLYVTNNGDK-TVSVINTVTKA  149 (301)
T ss_dssp             SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEETTTT-EEEEEETTTTE
T ss_pred             ccccccccccccccccccccccceeeecccccceeeeeccc---cccceEEEeecCCCeeeeeecccc-ceeeeeccccc
Confidence            4567889999998554 566778999999998876544432   366789999999999887776543 36778888888


Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC---CCcEE
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF---DGKVF  297 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~  297 (683)
                      ....+..+ ..+..+.++|++..++++...++.+.+|+....+....... ...+..++++++++.+++++.   ++.|+
T Consensus       150 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~v~~~~~~~~~v~  227 (301)
T d1l0qa2         150 VINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFNTVS  227 (301)
T ss_dssp             EEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEECSSCCEEE
T ss_pred             eeeecccC-CCceEEEeeccccceeeecccccccccccccceeeeecccc-cCCcceeeccccccccccccccceeeeee
Confidence            77776655 45788999999997556656667888888777766665554 455788999999998776543   46899


Q ss_pred             EEeCCCCeeEEeccCCccccCeEEEEEccCCCEE-EEEECCCcEEEEECCCCceeeEEEecC
Q psy15995        298 LYDGASADLVSELGNPAHKGGVYAVAWKPDGTQL-LTASGDKTCKLWDIETKSVVSEFIMGN  358 (683)
Q Consensus       298 iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~  358 (683)
                      +||..+++.+..+.   +...+.+++|+|||++| ++++.++.|++||+++++.+.++..+.
T Consensus       228 v~D~~t~~~~~~~~---~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~vg~  286 (301)
T d1l0qa2         228 MIDTGTNKITARIP---VGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGK  286 (301)
T ss_dssp             EEETTTTEEEEEEE---CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred             eeecCCCeEEEEEc---CCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEeCCC
Confidence            99999999988875   44568999999999987 566678999999999999988876543

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.93  E-value=4e-23  Score=193.33  Aligned_cols=272  Identities=16%  Similarity=0.177  Sum_probs=215.6

Q ss_pred             EEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEE-EeecCCccEEEEeccccceeeec
Q psy15995        101 ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYI-ASGDISGKVRIWDTVNKEHILKN  179 (683)
Q Consensus       101 as~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~  179 (683)
                      ++.+.|++|.|||+++++.+.++...               ..+..++|+|||++| ++++.++.|++||+.+++.+...
T Consensus         6 V~~~~~~~v~v~D~~t~~~~~~i~~g---------------~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~   70 (301)
T d1l0qa2           6 IANSESDNISVIDVTSNKVTATIPVG---------------SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV   70 (301)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEEECS---------------SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred             EEECCCCEEEEEECCCCeEEEEEECC---------------CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeee
Confidence            45678999999999999888777654               346789999999987 56778899999999998876544


Q ss_pred             cccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcC
Q psy15995        180 EFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG  259 (683)
Q Consensus       180 ~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~  259 (683)
                      ...   ..+..++|++++..+++.+... ..+.+++..+++....+..+ ....++.|+|++...++++..++.+.+|+.
T Consensus        71 ~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~  145 (301)
T d1l0qa2          71 PAG---SSPQGVAVSPDGKQVYVTNMAS-STLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINT  145 (301)
T ss_dssp             ECS---SSEEEEEECTTSSEEEEEETTT-TEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             ecc---cccccccccccccccccccccc-ceeeecccccceeeeecccc-ccceEEEeecCCCeeeeeeccccceeeeec
Confidence            322   4678999999999988877654 34678888888877777655 467889999999987788888999999999


Q ss_pred             CCCceeeeccccccCeEEEEECCCCCEEEEEcCC-CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC--
Q psy15995        260 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFD-GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG--  336 (683)
Q Consensus       260 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--  336 (683)
                      .+.+....+..+ ..+..++++|+++.+++++.+ +.+.+|+....+......   ....+..++++++++.++.++.  
T Consensus       146 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~v~~~~~  221 (301)
T d1l0qa2         146 VTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK---VEAAPSGIAVNPEGTKAYVTNVDK  221 (301)
T ss_dssp             TTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---CSSEEEEEEECTTSSEEEEEEECS
T ss_pred             cccceeeecccC-CCceEEEeeccccceeeecccccccccccccceeeeeccc---ccCCcceeeccccccccccccccc
Confidence            999888777644 458889999999988777654 667788887777776665   4456788999999998877654  


Q ss_pred             -CCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCC
Q psy15995        337 -DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRG  415 (683)
Q Consensus       337 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  415 (683)
                       ++.|++||+.+++.+..+.                                             +...+.+++|+|||+
T Consensus       222 ~~~~v~v~D~~t~~~~~~~~---------------------------------------------~~~~~~~va~spdg~  256 (301)
T d1l0qa2         222 YFNTVSMIDTGTNKITARIP---------------------------------------------VGPDPAGIAVTPDGK  256 (301)
T ss_dssp             SCCEEEEEETTTTEEEEEEE---------------------------------------------CCSSEEEEEECTTSS
T ss_pred             eeeeeeeeecCCCeEEEEEc---------------------------------------------CCCCEEEEEEeCCCC
Confidence             3579999999887655431                                             234578899999999


Q ss_pred             EE-EEEeCCCcEEEEcCCCCCcceecc
Q psy15995        416 TV-FTGSHDGFITRWNAKTGENDRVQG  441 (683)
Q Consensus       416 ~l-~~~~~dg~i~~w~~~~~~~~~~~~  441 (683)
                      +| ++++.++.|++||+.+++.+....
T Consensus       257 ~l~va~~~~~~i~v~D~~t~~~~~~~~  283 (301)
T d1l0qa2         257 KVYVALSFCNTVSVIDTATNTITATMA  283 (301)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             EEEEEECCCCeEEEEECCCCeEEEEEe
Confidence            87 577789999999999998776654

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=3.9e-24  Score=204.88  Aligned_cols=291  Identities=11%  Similarity=0.044  Sum_probs=218.5

Q ss_pred             EeeCCCCCeEEEe-cCCeEEEEeCCCCccccccc-CcccceEEEEECCCCcEE-EEecCCCCEEEEeCCCcccccccccc
Q psy15995         50 LGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYT-EHSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEHILKNEFH  126 (683)
Q Consensus        50 ~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~-~h~~~v~~~~~s~d~~~l-as~~~dg~i~iwd~~~~~~~~~~~~~  126 (683)
                      +++++++++|+++ .++.|.|||+++++.+++++ .|...+.+++|+|||+++ +++..++.|.+||+.+++.+..+...
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~   81 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS   81 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence            4789999999988 57899999999999998887 467778999999999987 56678899999999999887665543


Q ss_pred             cCCCCcccceeeeeecceeeeEeeccceEEEeec------------CCccEEEEeccccceeeeccccccCCCeeEEEEc
Q psy15995        127 PIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD------------ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWS  194 (683)
Q Consensus       127 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~------------~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s  194 (683)
                      ....        .....+..++|+|||+++++++            .++.+.+|+..+++.............+..+.++
T Consensus        82 ~~~~--------~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (346)
T d1jmxb_          82 SVPG--------EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAA  153 (346)
T ss_dssp             CSTT--------EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEEC
T ss_pred             cccc--------ccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEec
Confidence            2111        1113467889999999888765            4677999999988765544444444667778888


Q ss_pred             CCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCe-------------------------EEEEee
Q psy15995        195 PDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPF-------------------------RIITGS  249 (683)
Q Consensus       195 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------------------------~l~~~~  249 (683)
                      +++..++. +..    ..+|+..+++.+..+..+.. ...+.++|++..                         .+.++.
T Consensus       154 ~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (346)
T d1jmxb_         154 DDGSLYVA-GPD----IYKMDVKTGKYTVALPLRNW-NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD  227 (346)
T ss_dssp             TTSCEEEE-SSS----EEEECTTTCCEEEEECSTTC-CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCE
T ss_pred             CCCEEEEe-CCc----ceEEEccCCCEEEEEecCCC-ccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeecc
Confidence            88765543 322    57788777777766654322 233333333322                         234445


Q ss_pred             CCCeEEEEcCCCCceeee-ccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCC
Q psy15995        250 EDNTIAVFEGPPFKFKMT-KQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDG  328 (683)
Q Consensus       250 ~d~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  328 (683)
                      .+..+.+|+..++..... ...+...+..+.+++++.+++... ++.|.+||..+++.+..+.   +...+.+++|+|||
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~---~~~~~~~va~s~DG  303 (346)
T d1jmxb_         228 LLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAAN---LDHTYYCVAFDKKG  303 (346)
T ss_dssp             EEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEE---CSSCCCEEEECSSS
T ss_pred             CCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEec-CCeEEEEECCCCcEEEEEc---CCCCEEEEEEcCCC
Confidence            556778888877765543 456778899999999998887766 4689999999999988876   44578999999999


Q ss_pred             CEEEEEECCCcEEEEECCCCceeeEEEecC
Q psy15995        329 TQLLTASGDKTCKLWDIETKSVVSEFIMGN  358 (683)
Q Consensus       329 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  358 (683)
                      +++++++.|+.|++||.++++.+.++....
T Consensus       304 ~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~  333 (346)
T d1jmxb_         304 DKLYLGGTFNDLAVFNPDTLEKVKNIKLPG  333 (346)
T ss_dssp             SCEEEESBSSEEEEEETTTTEEEEEEECSS
T ss_pred             CEEEEEeCCCcEEEEECccCCEEEEEECCC
Confidence            999999999999999999999998887654

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.93  E-value=7.2e-24  Score=202.15  Aligned_cols=310  Identities=9%  Similarity=0.045  Sum_probs=208.8

Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeeccc--cccCeEEEEECCCCCEE-EEEcCCCcEEEEeCCCCeeEEeccCCc---ccc
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTKQE--HSRFVQAVRYSPSGSHF-ASAGFDGKVFLYDGASADLVSELGNPA---HKG  317 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~---~~~  317 (683)
                      ++++++.|++|++||+++++.+..+..  +...+.+++|+|||+++ ++++.++.|.+||+.+++.+..+....   +..
T Consensus         3 ~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~   82 (337)
T d1pbyb_           3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK   82 (337)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred             EEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCccccc
Confidence            499999999999999999999888754  34567899999999987 466789999999999999988775421   233


Q ss_pred             CeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceee
Q psy15995        318 GVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRV  397 (683)
Q Consensus       318 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~  397 (683)
                      .+..++|+|++++++++..+.....|...                               ..++.+.+||.... .....
T Consensus        83 ~~~~v~~s~dg~~l~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~d~~~~-~~~~~  130 (337)
T d1pbyb_          83 SLFGAALSPDGKTLAIYESPVRLELTHFE-------------------------------VQPTRVALYDAETL-SRRKA  130 (337)
T ss_dssp             CTTCEEECTTSSEEEEEEEEEEECSSCEE-------------------------------ECCCEEEEEETTTT-EEEEE
T ss_pred             ceeeEEEcCCCcEEEEeecCCcceeeecc-------------------------------ccccceeeccccCC-eEEEe
Confidence            45678999999999888654322222111                               11122333333321 11122


Q ss_pred             eeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEE-cCCeEEEEeCCCCc
Q psy15995        398 IKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCG-IDDTIKQVDLSSNA  476 (683)
Q Consensus       398 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~~~~~~~~~  476 (683)
                      +. +...+..++++|+|+++++++.  .+.+||..+++...................+..+.... ..+...        
T Consensus       131 ~~-~~~~~~~~~~s~dg~~l~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  199 (337)
T d1pbyb_         131 FE-APRQITMLAWARDGSKLYGLGR--DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMA--------  199 (337)
T ss_dssp             EE-CCSSCCCEEECTTSSCEEEESS--SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEE--------
T ss_pred             cc-ccCCceEEEEcCCCCEEEEEcC--CcceeeeecCcEEEEeecCCccccceecCCcceeeccccccceee--------
Confidence            22 3445778899999999999865  47789988877655543211111111111110000000 000000        


Q ss_pred             ccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccC
Q psy15995        477 YSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLS  556 (683)
Q Consensus       477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~  556 (683)
                                                                     ........+......+..++.+.+|+..++...
T Consensus       200 -----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (337)
T d1pbyb_         200 -----------------------------------------------TPFYTARKDIDPADPTAYRTGLLTMDLETGEMA  232 (337)
T ss_dssp             -----------------------------------------------EEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred             -----------------------------------------------eeeeeeeeccceeeecccCccEEEEEcCCCcEE
Confidence                                                           001111222223333445667999999988776


Q ss_pred             cceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEe
Q psy15995        557 PKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWS  636 (683)
Q Consensus       557 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~  636 (683)
                      ......+...+..++++|++.+++.+  ++.+++||+.+++.+....   +...+.+++|+|||++|++++.|+.|++||
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~---~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D  307 (337)
T d1pbyb_         233 MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP---LPHSYYSVNVSTDGSTVWLGGALGDLAAYD  307 (337)
T ss_dssp             EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE---CSSCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred             EEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEc---CCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence            55555677888999999999998876  4889999999999876554   667889999999999999999999999999


Q ss_pred             CCCCceeeEeec
Q psy15995        637 LASPAKHIIIKN  648 (683)
Q Consensus       637 ~~~~~~~~~~~~  648 (683)
                      .++.+.+..+..
T Consensus       308 ~~t~~~v~~i~~  319 (337)
T d1pbyb_         308 AETLEKKGQVDL  319 (337)
T ss_dssp             TTTCCEEEEEEC
T ss_pred             CCCCcEEEEEEC
Confidence            999998877754

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.92  E-value=7e-24  Score=203.05  Aligned_cols=321  Identities=11%  Similarity=0.041  Sum_probs=212.2

Q ss_pred             EEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc-ccccCeEEEEECCCCCEE-EEEcCCCcEEEEeCCCCeeEEeccC
Q psy15995        235 CDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ-EHSRFVQAVRYSPSGSHF-ASAGFDGKVFLYDGASADLVSELGN  312 (683)
Q Consensus       235 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~  312 (683)
                      ++|++++++ +++++.+++|.+||+.+++.+.++. .+...+.+++|+|||+++ +++..++.|++||+.+++.+..+..
T Consensus         2 ~a~~~~~~~-l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~   80 (346)
T d1jmxb_           2 PALKAGHEY-MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL   80 (346)
T ss_dssp             CCCCTTCEE-EEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred             ccCCCCCcE-EEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecc
Confidence            468889986 9999999999999999999988876 456678999999999977 4556789999999999998877654


Q ss_pred             Cc----cccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEec
Q psy15995        313 PA----HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDV  388 (683)
Q Consensus       313 ~~----~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~  388 (683)
                      ..    +...+..++|+|||+++++++.+.....+.                               ....++.+.+|+.
T Consensus        81 ~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~-------------------------------~~~~~~~i~~~~~  129 (346)
T d1jmxb_          81 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH-------------------------------YVVKPPRLEVFST  129 (346)
T ss_dssp             CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSC-------------------------------EEECCCEEEEEEG
T ss_pred             cccccccCCceEEEEEecCCCEEEEEecCCcceeee-------------------------------eccCcceEEEEec
Confidence            22    223456889999999998876432111110                               0111233333443


Q ss_pred             CCCCcceeeee--eccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeE-EEEEcCC
Q psy15995        389 NNPSTPIRVIK--GHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELL-YTCGIDD  465 (683)
Q Consensus       389 ~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-~~~~~d~  465 (683)
                      ...... ..+.  .....+..+.+++++..++++   +.+.+|+..+++............-..+...+..+ +....++
T Consensus       130 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (346)
T d1jmxb_         130 ADGLEA-KPVRTFPMPRQVYLMRAADDGSLYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRH  205 (346)
T ss_dssp             GGGGGB-CCSEEEECCSSCCCEEECTTSCEEEES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTC
T ss_pred             ccceee-eEEEeeeccCceEEEEecCCCEEEEeC---CcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCC
Confidence            331111 1111  122334556666776655542   45889999887776655322211111111122221 1112222


Q ss_pred             eEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcE
Q psy15995        466 TIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKV  545 (683)
Q Consensus       466 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i  545 (683)
                      .+.+++.                                                     .....+....++++..++.+
T Consensus       206 ~~~~~~~-----------------------------------------------------~~~~~~~~~~~~~~~~~~~~  232 (346)
T d1jmxb_         206 EFSMLYT-----------------------------------------------------IARFKDDKQDPATADLLYGY  232 (346)
T ss_dssp             EEEEEEE-----------------------------------------------------EEEC-------CCCEEEEEE
T ss_pred             ceEeeee-----------------------------------------------------eeeeccCceeEeeccCCceE
Confidence            2222221                                                     11122333445555667789


Q ss_pred             EEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEE
Q psy15995        546 HIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVAS  625 (683)
Q Consensus       546 ~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~  625 (683)
                      .+|+..++........++...+..+.+++++.+++.... +.+.+||..+++.+....   +...+.+++|||||++|++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~---~~~~~~~va~s~DG~~l~v  308 (346)
T d1jmxb_         233 LSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAAN---LDHTYYCVAFDKKGDKLYL  308 (346)
T ss_dssp             EEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEE---CSSCCCEEEECSSSSCEEE
T ss_pred             EEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEc---CCCCEEEEEEcCCCCEEEE
Confidence            999999888776666668888999999999988887764 679999999998875544   4567999999999999999


Q ss_pred             eecCCcEEEEeCCCCceeeEeec
Q psy15995        626 GSLDTTIIIWSLASPAKHIIIKN  648 (683)
Q Consensus       626 ~~~d~~v~iw~~~~~~~~~~~~~  648 (683)
                      ++.|+.|++||+++.+.+..+..
T Consensus       309 ~~~d~~v~v~D~~t~~~i~~i~~  331 (346)
T d1jmxb_         309 GGTFNDLAVFNPDTLEKVKNIKL  331 (346)
T ss_dssp             ESBSSEEEEEETTTTEEEEEEEC
T ss_pred             EeCCCcEEEEECccCCEEEEEEC
Confidence            99999999999999999887764

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.92  E-value=1.2e-23  Score=200.57  Aligned_cols=280  Identities=16%  Similarity=0.122  Sum_probs=211.4

Q ss_pred             CeEEEe-cCCeEEEEeCCCCcccccccC--cccceEEEEECCCCcEE-EEecCCCCEEEEeCCCcccccccccccCCCCc
Q psy15995         57 KNFLYT-NGNSVIIRNIENPAISDIYTE--HSCAVNVAKYSPSGFYI-ASGDISGKVRIWDTVNKEHILKNEFHPIGGPI  132 (683)
Q Consensus        57 ~~l~~~-~~~~i~v~~~~~~~~~~~~~~--h~~~v~~~~~s~d~~~l-as~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  132 (683)
                      +|++++ .++.|.|||+++++.++.+..  +...+.+++|+|||++| ++++.++.|.+||+.+++.+.++..+...   
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~---   78 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE---   78 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT---
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCc---
Confidence            355555 579999999999999888764  45668899999999987 56778999999999999888776654311   


Q ss_pred             ccceeeeeecceeeeEeeccceEEEeecC------------CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeE
Q psy15995        133 KDIGTLLSLTSIRNILVLSIGFYIASGDI------------SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRM  200 (683)
Q Consensus       133 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------------d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  200 (683)
                            .....+..++|+||+++++++..            +..+.+||..+++.......   ...+..++|+|||+++
T Consensus        79 ------~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l  149 (337)
T d1pbyb_          79 ------ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA---PRQITMLAWARDGSKL  149 (337)
T ss_dssp             ------EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC---CSSCCCEEECTTSSCE
T ss_pred             ------ccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc---cCCceEEEEcCCCCEE
Confidence                  11245668899999999987763            56788999998876544432   3668899999999999


Q ss_pred             EEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCe-----------------------EEEEeeCCCeEEEE
Q psy15995        201 VVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPF-----------------------RIITGSEDNTIAVF  257 (683)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----------------------~l~~~~~d~~i~iw  257 (683)
                      ++++.+    ..+|+..+++....+..+... ....+.|++..                       .......++.+.+|
T Consensus       150 ~~~~~~----~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (337)
T d1pbyb_         150 YGLGRD----LHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTM  224 (337)
T ss_dssp             EEESSS----EEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEE
T ss_pred             EEEcCC----cceeeeecCcEEEEeecCCcc-ccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEE
Confidence            998765    577888877766655443221 11111111110                       12223445678889


Q ss_pred             cCCCCceeee-ccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC
Q psy15995        258 EGPPFKFKMT-KQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG  336 (683)
Q Consensus       258 ~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  336 (683)
                      +..+++.... ...+...+..+.++|++.+++.+  ++.+++||+.+++.+..+.   +...+.+++|+|||++|++++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~---~~~~~~~~~~s~dG~~l~v~~~  299 (337)
T d1pbyb_         225 DLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP---LPHSYYSVNVSTDGSTVWLGGA  299 (337)
T ss_dssp             ETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE---CSSCCCEEEECTTSCEEEEESB
T ss_pred             EcCCCcEEEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEc---CCCCEEEEEECCCCCEEEEEeC
Confidence            9888775543 45677788999999999988766  4889999999999998886   5667899999999999999999


Q ss_pred             CCcEEEEECCCCceeeEEEecC
Q psy15995        337 DKTCKLWDIETKSVVSEFIMGN  358 (683)
Q Consensus       337 dg~i~iwd~~~~~~~~~~~~~~  358 (683)
                      ++.|++||.++++.+.++....
T Consensus       300 ~~~i~v~D~~t~~~v~~i~~~g  321 (337)
T d1pbyb_         300 LGDLAAYDAETLEKKGQVDLPG  321 (337)
T ss_dssp             SSEEEEEETTTCCEEEEEECGG
T ss_pred             CCcEEEEECCCCcEEEEEECCC
Confidence            9999999999999988886543

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.90  E-value=1.8e-20  Score=180.86  Aligned_cols=315  Identities=13%  Similarity=0.034  Sum_probs=223.1

Q ss_pred             ccCcccceEEEEECCCCcEEEEec-----CCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceE
Q psy15995         81 YTEHSCAVNVAKYSPSGFYIASGD-----ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFY  155 (683)
Q Consensus        81 ~~~h~~~v~~~~~s~d~~~las~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  155 (683)
                      ...+..++..++++|||++++...     ..+.|.+||..+++.+.++..+.                ...++|+|||++
T Consensus        16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~----------------~~~~a~SpDG~~   79 (373)
T d2madh_          16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGF----------------LPNPVAAHSGSE   79 (373)
T ss_pred             cccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCC----------------CccEEEcCCCCE
Confidence            346888999999999999987642     34579999999998887665432                236899999999


Q ss_pred             EEeec----------CCccEEEEeccccceeeeccccccC-----CCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCC
Q psy15995        156 IASGD----------ISGKVRIWDTVNKEHILKNEFHPIG-----GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT  220 (683)
Q Consensus       156 l~~~~----------~d~~i~iwd~~~~~~~~~~~~~~~~-----~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~  220 (683)
                      |++++          .++.|.+||..+++.+.........     .....+.|++|++.+++...+......+++....+
T Consensus        80 l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~  159 (373)
T d2madh_          80 FALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSS  159 (373)
T ss_pred             EEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCe
Confidence            98864          4678999999999876554433211     12356899999998888776655556666666555


Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecccc------ccCeEEEEECCCCCEEEEEcCCC
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEH------SRFVQAVRYSPSGSHFASAGFDG  294 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~dg  294 (683)
                      ...    +.....++.++|+++..+++.+.|+.+.+|+...++.......+      ........+.+++.. +..+.++
T Consensus       160 ~~~----~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  234 (373)
T d2madh_         160 DDQ----LLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRI-VWPVYSG  234 (373)
T ss_pred             EEE----EeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceE-EEecCCc
Confidence            433    33446788999999987889999999999998888766654332      223345566666654 4556689


Q ss_pred             cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEE
Q psy15995        295 KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL  374 (683)
Q Consensus       295 ~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  374 (683)
                      .+.+|+..++..........+........+.|.....+..+.++....+-..                       .+..+
T Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-----------------------~~~~~  291 (373)
T d2madh_         235 KILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTS-----------------------EQSAW  291 (373)
T ss_pred             eEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecC-----------------------CCceE
Confidence            9999998887654443333355556666677766666666666654333221                       34455


Q ss_pred             EEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCE--EEEEeCCCcEEEEcCCCCCcceecc
Q psy15995        375 LTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGT--VFTGSHDGFITRWNAKTGENDRVQG  441 (683)
Q Consensus       375 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~~dg~i~~w~~~~~~~~~~~~  441 (683)
                      +....++.+.+||...+.. +..+ .+...+..++|+|||+.  +++++.|+.|++||+.+++.+....
T Consensus       292 ~~~~~~~~v~~~d~~t~~~-~~~~-~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~  358 (373)
T d2madh_         292 KLHAAAKEVTSVTGLVGQT-SSQI-SLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTV  358 (373)
T ss_pred             EeecCCCeEEEEECCCCcE-EEEe-cCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEC
Confidence            6666777888888877433 3333 35667899999999984  4678899999999999999887774

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=4.3e-20  Score=175.21  Aligned_cols=278  Identities=12%  Similarity=0.102  Sum_probs=191.7

Q ss_pred             EecCCeEEEEeCCCCcccccc--cCcccceEEEEECCCCcEEEE-ecCCCCEEEEeCCCcccccccccccCCCCccccee
Q psy15995         61 YTNGNSVIIRNIENPAISDIY--TEHSCAVNVAKYSPSGFYIAS-GDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGT  137 (683)
Q Consensus        61 ~~~~~~i~v~~~~~~~~~~~~--~~h~~~v~~~~~s~d~~~las-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  137 (683)
                      ...++.|++|++++...+..+  ..|.+.|..++|||||++|++ +..|+.|++|++.......+...+.          
T Consensus        10 ~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~----------   79 (333)
T d1ri6a_          10 SPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES----------   79 (333)
T ss_dssp             EGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE----------
T ss_pred             CCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeec----------
Confidence            336889999998765433333  268899999999999999954 5568999999998765443332221          


Q ss_pred             eeeecceeeeEeeccceEEEeecC-CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEc
Q psy15995        138 LLSLTSIRNILVLSIGFYIASGDI-SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMS  216 (683)
Q Consensus       138 ~~~~~~i~~~~~s~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~  216 (683)
                       .....+..++|+|||++|++++. ++.+.+|+..............+...+.++.++||+++++........ +.++..
T Consensus        80 -~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~-i~~~~~  157 (333)
T d1ri6a_          80 -ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDR-ICLFTV  157 (333)
T ss_dssp             -ECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTE-EEEEEE
T ss_pred             -ccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccce-eeEEEe
Confidence             11145678999999999988875 678999998877665555555666788999999999999888766544 455555


Q ss_pred             cCCCceee------eecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCce----eeec------cccccCeEEEEE
Q psy15995        217 ETGTSVGE------ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF----KMTK------QEHSRFVQAVRY  280 (683)
Q Consensus       217 ~~~~~~~~------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~----~~~~------~~~~~~v~~~~~  280 (683)
                      ........      ..........++|++++.....+....+...+++......    ....      .........+++
T Consensus       158 ~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (333)
T d1ri6a_         158 SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI  237 (333)
T ss_dssp             CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE
T ss_pred             ccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEE
Confidence            54332221      1234456789999999998667777778888887543221    1111      123345678899


Q ss_pred             CCCCCEEEE-EcCCCcEEEEeCCCCeeEEecc-CCccccCeEEEEEccCCCEEEEEEC-CCcEEEE--ECCCCce
Q psy15995        281 SPSGSHFAS-AGFDGKVFLYDGASADLVSELG-NPAHKGGVYAVAWKPDGTQLLTASG-DKTCKLW--DIETKSV  350 (683)
Q Consensus       281 ~~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iw--d~~~~~~  350 (683)
                      ++++++++. +..++.+.+|++.......... .......+.+++|+|||++|++++. ++.|++|  |.++++.
T Consensus       238 s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l  312 (333)
T d1ri6a_         238 TPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL  312 (333)
T ss_dssp             CTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred             ecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcE
Confidence            999996655 4557789999876553322221 1113456788999999999887764 5889998  4556654

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.87  E-value=5.5e-19  Score=170.34  Aligned_cols=323  Identities=9%  Similarity=-0.036  Sum_probs=216.4

Q ss_pred             cccccCeEEEEECCCCCEEEEEc-----CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC-------
Q psy15995        269 QEHSRFVQAVRYSPSGSHFASAG-----FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG-------  336 (683)
Q Consensus       269 ~~~~~~v~~~~~~~~~~~l~~~~-----~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------  336 (683)
                      ..+..++..++++|||+.+++..     ..+.+.+||..+++.+..+..  +.  ...++|+|||++|++++.       
T Consensus        17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~--~~--~~~~a~SpDG~~l~va~~~~~~~~~   92 (373)
T d2madh_          17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG--GF--LPNPVAAHSGSEFALASTSFSRIAK   92 (373)
T ss_pred             ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeC--CC--CccEEEcCCCCEEEEEeecCCcccc
Confidence            35778899999999999887652     346799999999999988753  33  337999999999988753       


Q ss_pred             ---CCcEEEEECCCCceeeEEEecCcc------eeceEEEEecCCEEEEEe--cCCcEEEEecCCCCcceeeeeeccccE
Q psy15995        337 ---DKTCKLWDIETKSVVSEFIMGNQV------EDQQVSCLWQGDYLLTVS--LSGFISYLDVNNPSTPIRVIKGHNKPI  405 (683)
Q Consensus       337 ---dg~i~iwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~--~~g~i~~~~~~~~~~~~~~~~~~~~~v  405 (683)
                         ++.|.+||..+++.+..+......      ....+.++++++.+++..  .++.+.+|+.....     ...+....
T Consensus        93 ~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~  167 (373)
T d2madh_          93 GKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSS-----DDQLLSSP  167 (373)
T ss_pred             cccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCe-----EEEEeccc
Confidence               577999999999988776544322      224567778888766554  34577888876522     23344556


Q ss_pred             EEEEEeCCCCEE-EEEeCCCcEEEEcCCCCCcceeccC-----CCCcceeEEEEe-CCeEEEEEcCCeEEEEeCCCCccc
Q psy15995        406 TALALSPDRGTV-FTGSHDGFITRWNAKTGENDRVQGA-----GHGNQINGMKAT-GELLYTCGIDDTIKQVDLSSNAYS  478 (683)
Q Consensus       406 ~~~~~~~~~~~l-~~~~~dg~i~~w~~~~~~~~~~~~~-----~~~~~v~~~~~~-~~~l~~~~~d~~i~~~~~~~~~~~  478 (683)
                      .++.++|+++.+ ++.+.|+.+.+|+...++.......     ........+.+. +..++..+.++.+.+|+.......
T Consensus       168 ~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  247 (373)
T d2madh_         168 TCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT  247 (373)
T ss_pred             eeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEE
Confidence            788999998765 5788999999999988776554321     112222333344 455667778888888887765321


Q ss_pred             CCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcc
Q psy15995        479 GPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPK  558 (683)
Q Consensus       479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~  558 (683)
                      ......                                  ..........+.|.....+..+.|+..             
T Consensus       248 ~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~d~~~-------------  280 (373)
T d2madh_         248 NKAPID----------------------------------ALSGGRKADTWRPGGWQQVAYLKSSDG-------------  280 (373)
T ss_pred             EEEeec----------------------------------cccCcEEeeeeccCcceeeEEecCCCe-------------
Confidence            000000                                  000001111222222222222222211             


Q ss_pred             eeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCe--EEEeecCCcEEEEe
Q psy15995        559 AELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSAL--VASGSLDTTIIIWS  636 (683)
Q Consensus       559 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~--l~~~~~d~~v~iw~  636 (683)
                                ...+.+++..++....++.+.+||..+++.+....   +...+.+++|+|||+.  +++++.|+.|++||
T Consensus       281 ----------~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~---~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D  347 (373)
T d2madh_         281 ----------IYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS---LGHDVDAISVAQDGGPDLYALSAGTEVLHIYD  347 (373)
T ss_pred             ----------EEEecCCCceEEeecCCCeEEEEECCCCcEEEEec---CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEE
Confidence                      11233455666777888999999999998876554   6678999999999984  57889999999999


Q ss_pred             CCCCceeeEeecCCCCCCeeEEEEcc
Q psy15995        637 LASPAKHIIIKNAHPQSQITRLQWLD  662 (683)
Q Consensus       637 ~~~~~~~~~~~~~~~~~~v~~l~~~~  662 (683)
                      +.+++.+..+..  +....+.|+..+
T Consensus       348 ~~tg~~~~~~~~--~g~~P~~l~~~~  371 (373)
T d2madh_         348 AGAGDQDQSTVE--LGSGPQVLSVMN  371 (373)
T ss_pred             CCCCCEEEEECC--CCCCCcEEEEec
Confidence            999999988876  456677777654

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.85  E-value=5.5e-20  Score=176.20  Aligned_cols=286  Identities=12%  Similarity=0.024  Sum_probs=200.8

Q ss_pred             eeCCCCCeEEEec------CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEe----------cCCCCEEEEeC
Q psy15995         51 GGDPKGKNFLYTN------GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASG----------DISGKVRIWDT  114 (683)
Q Consensus        51 ~~s~~~~~l~~~~------~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~----------~~dg~i~iwd~  114 (683)
                      +.+|||+.++...      .+.|.+||..+++++.++..+..+  .++|||||++|+++          +.|+.|++||+
T Consensus         8 a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~   85 (355)
T d2bbkh_           8 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP   85 (355)
T ss_dssp             CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred             eeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEEC
Confidence            5699999997652      347999999999998888765544  79999999988764          34788999999


Q ss_pred             CCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEee--cCCccEEEEeccccceeeecccccc-----CCC
Q psy15995        115 VNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASG--DISGKVRIWDTVNKEHILKNEFHPI-----GGP  187 (683)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~~~-----~~~  187 (683)
                      .+++.+..+..+.....       ........++|++++++++..  +.+..+.+|+..+++.+........     .+.
T Consensus        86 ~t~~~~~~~~~~~~~~~-------~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (355)
T d2bbkh_          86 VTLLPTADIELPDAPRF-------LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAP  158 (355)
T ss_dssp             TTCCEEEEEEETTCCCC-------CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEET
T ss_pred             CCCCEEEEEecCCccee-------ecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCC
Confidence            99988776655432110       111334678999999987765  4567899999999876544332211     123


Q ss_pred             eeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeee
Q psy15995        188 IKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT  267 (683)
Q Consensus       188 i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  267 (683)
                      ...+.+++|++.+++....... ..+.......     ..+...+....+.+++.. ++.++.++.+.+|+...++....
T Consensus       159 ~~~~~~~~dg~~~~v~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~  231 (355)
T d2bbkh_         159 DTFFMHCRDGSLAKVAFGTEGT-PEITHTEVFH-----PEDEFLINHPAYSQKAGR-LVWPTYTGKIHQIDLSSGDAKFL  231 (355)
T ss_dssp             TEEEEEETTSCEEEEECCSSSC-CEEEECCCCS-----CTTSCBCSCCEEETTTTE-EEEEBTTSEEEEEECTTSSCEEC
T ss_pred             cceEEEcCCCCEEEEEecCCCe-EEEEeccccc-----ceecceeeeccccCCCCe-EEEecCCCeEEEEecCCCcEEEE
Confidence            4567788888877765544332 2233322222     123344556677777774 88889999999999887654321


Q ss_pred             c--cc----------cccCeEEEEECCCCCEEEEEcCC----------CcEEEEeCCCCeeEEeccCCccccCeEEEEEc
Q psy15995        268 K--QE----------HSRFVQAVRYSPSGSHFASAGFD----------GKVFLYDGASADLVSELGNPAHKGGVYAVAWK  325 (683)
Q Consensus       268 ~--~~----------~~~~v~~~~~~~~~~~l~~~~~d----------g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~  325 (683)
                      .  ..          .......+++++++..++....+          ..|.+||..+++.+..+.   +...+.+++|+
T Consensus       232 ~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~---~~~~~~~~a~s  308 (355)
T d2bbkh_         232 PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE---MGHEIDSINVS  308 (355)
T ss_dssp             CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE---EEEEECEEEEC
T ss_pred             eccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEec---CCCCEEEEEEc
Confidence            1  11          11233458899999987766543          369999999999888876   55668899999


Q ss_pred             cCCCE--EEEEECCCcEEEEECCCCceeeEEE
Q psy15995        326 PDGTQ--LLTASGDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       326 ~~~~~--l~~~~~dg~i~iwd~~~~~~~~~~~  355 (683)
                      |||+.  ++++..|+.|++||+++++.+.++.
T Consensus       309 pDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~  340 (355)
T d2bbkh_         309 QDEKPLLYALSTGDKTLYIHDAESGEELRSVN  340 (355)
T ss_dssp             CSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred             CCCCeEEEEEECCCCEEEEEECCCCCEEEEEe
Confidence            99983  4556678999999999999988774

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.85  E-value=3.5e-19  Score=170.54  Aligned_cols=308  Identities=12%  Similarity=0.081  Sum_probs=205.5

Q ss_pred             EEEECCCCCEEEEEc-----CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEE----------CCCcEE
Q psy15995        277 AVRYSPSGSHFASAG-----FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS----------GDKTCK  341 (683)
Q Consensus       277 ~~~~~~~~~~l~~~~-----~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~  341 (683)
                      -.+.+||++.+++..     .++.|.+||..+++.+..+..    +....++|+|||++|++.+          .++.|+
T Consensus         6 ~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~----g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~   81 (355)
T d2bbkh_           6 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG----GFLPNPVVADDGSFIAHASTVFSRIARGERTDYVE   81 (355)
T ss_dssp             CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE----CSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred             eEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEEC----CCCCceEEcCCCCEEEEEeCCCccccccCCCCEEE
Confidence            346689999887653     355799999999999888743    3444799999999888653          467899


Q ss_pred             EEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEe
Q psy15995        342 LWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS  421 (683)
Q Consensus       342 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  421 (683)
                      +||+.+++.+..+.......                                     .........++|+|++++++.+.
T Consensus        82 v~D~~t~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~s~dg~~~~v~~  124 (355)
T d2bbkh_          82 VFDPVTLLPTADIELPDAPR-------------------------------------FLVGTYPWMTSLTPDGKTLLFYQ  124 (355)
T ss_dssp             EECTTTCCEEEEEEETTCCC-------------------------------------CCBSCCGGGEEECTTSSEEEEEE
T ss_pred             EEECCCCCEEEEEecCCcce-------------------------------------eecCCCCceEEEecCCCeeEEec
Confidence            99999998876654322100                                     01112234578999999888764


Q ss_pred             --CCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEE
Q psy15995        422 --HDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLV  499 (683)
Q Consensus       422 --~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (683)
                        .+..+.+|+..+++.........  ............+..+.|+....+.............                
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~----------------  186 (355)
T d2bbkh_         125 FSPAPAVGVVDLEGKAFKRMLDVPD--CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT----------------  186 (355)
T ss_dssp             CSSSCEEEEEETTTTEEEEEEECCS--EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEEC----------------
T ss_pred             CCCCceeeeeecCCCcEeeEEecCC--cceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEec----------------
Confidence              45789999999988776653221  1222222355666677777776666544321100000                


Q ss_pred             EEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeec-----------CCcCee
Q psy15995        500 TVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELD-----------HLGPVT  568 (683)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----------~~~~v~  568 (683)
                                    ..........+....+.+++..++.++.++.+++|++..+.........           ......
T Consensus       187 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  252 (355)
T d2bbkh_         187 --------------EVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQ  252 (355)
T ss_dssp             --------------CCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSS
T ss_pred             --------------ccccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceE
Confidence                          0000111223445677888888999999999999999887543211110           112345


Q ss_pred             EEEECCCCCEEEEEeCC----------CeEEEEECCCCccccccceeeecccEEEEEecCCCC--eEEEeecCCcEEEEe
Q psy15995        569 DCSFSPSNEYLVASDAH----------RKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSA--LVASGSLDTTIIIWS  636 (683)
Q Consensus       569 ~~~~s~~~~~l~~~~~d----------~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~--~l~~~~~d~~v~iw~  636 (683)
                      .+++++++..++....+          ..|.+||..+++.+....   +...+.+++|+|||+  ++++++.|+.|++||
T Consensus       253 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~---~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D  329 (355)
T d2bbkh_         253 QVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE---MGHEIDSINVSQDEKPLLYALSTGDKTLYIHD  329 (355)
T ss_dssp             CEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE---EEEEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred             EEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEec---CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEE
Confidence            68899999988876543          469999999998876554   446689999999998  456677899999999


Q ss_pred             CCCCceeeEeecCCCCCCeeEEEEcc
Q psy15995        637 LASPAKHIIIKNAHPQSQITRLQWLD  662 (683)
Q Consensus       637 ~~~~~~~~~~~~~~~~~~v~~l~~~~  662 (683)
                      +++++.+..+..  +......+.+.|
T Consensus       330 ~~tg~~~~~i~~--~G~~p~~i~~~d  353 (355)
T d2bbkh_         330 AESGEELRSVNQ--LGHGPQVITTAD  353 (355)
T ss_dssp             TTTCCEEEEECC--CCSSCCEEECCC
T ss_pred             CCCCCEEEEEeC--cCCCccEEEeCC
Confidence            999999888865  334445554443

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=1.9e-18  Score=163.72  Aligned_cols=286  Identities=13%  Similarity=0.096  Sum_probs=189.1

Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeec--cccccCeEEEEECCCCCEEEEE-cCCCcEEEEeCCCCeeEEecc-CCccccCe
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTK--QEHSRFVQAVRYSPSGSHFASA-GFDGKVFLYDGASADLVSELG-NPAHKGGV  319 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~-~~~~~~~i  319 (683)
                      .+++++.|++|++|++.....+..+  ..|...+..++|+|||++|+++ ..|+.|++|++........+. ...+...+
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p   85 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL   85 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence            4688889999999998765433323  3678889999999999988655 458999999987654322221 11144567


Q ss_pred             EEEEEccCCCEEEEEEC-CCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeee
Q psy15995        320 YAVAWKPDGTQLLTASG-DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVI  398 (683)
Q Consensus       320 ~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~  398 (683)
                      ..++|+|||++|++++. ++.+.+|+..........                                          ..
T Consensus        86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~------------------------------------------~~  123 (333)
T d1ri6a_          86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV------------------------------------------DV  123 (333)
T ss_dssp             SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEE------------------------------------------EE
T ss_pred             eEEEEcCCCCEEeecccCCCceeeeccccccceecc------------------------------------------cc
Confidence            78999999999999875 667888887765443322                                          12


Q ss_pred             eeccccEEEEEEeCCCCEEEEEeC-CCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcc
Q psy15995        399 KGHNKPITALALSPDRGTVFTGSH-DGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAY  477 (683)
Q Consensus       399 ~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~  477 (683)
                      ..+...+.++.++|++++++.++. +..|.+|+...........                                    
T Consensus       124 ~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------------------------------------  167 (333)
T d1ri6a_         124 VEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQD------------------------------------  167 (333)
T ss_dssp             ECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEE------------------------------------
T ss_pred             cCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeee------------------------------------
Confidence            234556778899999998887765 4568888876544322110                                    


Q ss_pred             cCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEc-CCCcEEEEEcCCCccC
Q psy15995        478 SGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGG-ADSKVHIYELNNKSLS  556 (683)
Q Consensus       478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~  556 (683)
                                                         ...........+..+++++++.+++... ..+...+++.......
T Consensus       168 -----------------------------------~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  212 (333)
T d1ri6a_         168 -----------------------------------PAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGN  212 (333)
T ss_dssp             -----------------------------------EEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSC
T ss_pred             -----------------------------------ceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccc
Confidence                                               0000111223456788999988876654 4566788876554322


Q ss_pred             ccee---------ecCCcCeeEEEECCCCCEEEEE-eCCCeEEEEECCCCcccccc-ceeeecccEEEEEecCCCCeEEE
Q psy15995        557 PKAE---------LDHLGPVTDCSFSPSNEYLVAS-DAHRKVVLYRVPDFELAHNK-EWGFHSAKVNCVAWSPDSALVAS  625 (683)
Q Consensus       557 ~~~~---------~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~-~~~~h~~~v~~~~~s~d~~~l~~  625 (683)
                      ....         .........+++++|+++++.. ..++.+.+|++......... ....+...+.+++|+|||++|++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~v  292 (333)
T d1ri6a_         213 IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIA  292 (333)
T ss_dssp             CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEE
T ss_pred             eeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEE
Confidence            1111         1133456788999999977665 56778999998765433222 22223456789999999998877


Q ss_pred             ee-cCCcEEEEeC--CCCce
Q psy15995        626 GS-LDTTIIIWSL--ASPAK  642 (683)
Q Consensus       626 ~~-~d~~v~iw~~--~~~~~  642 (683)
                      ++ .++.|++|++  ++++.
T Consensus       293 a~~~~~~v~v~~id~~tG~l  312 (333)
T d1ri6a_         293 AGQKSHHISVYEIVGEQGLL  312 (333)
T ss_dssp             ECTTTCEEEEEEEETTTTEE
T ss_pred             EECCCCeEEEEEEECCCCcE
Confidence            65 5688999955  45543

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.77  E-value=7.1e-17  Score=160.29  Aligned_cols=360  Identities=12%  Similarity=0.059  Sum_probs=208.7

Q ss_pred             EEEeeCCCCCeEEEecCCeEEEEeCCCCcccc-----cccCcccceEEEEECCCCcEEEEecC---------CCCEEEEe
Q psy15995         48 IVLGGDPKGKNFLYTNGNSVIIRNIENPAISD-----IYTEHSCAVNVAKYSPSGFYIASGDI---------SGKVRIWD  113 (683)
Q Consensus        48 ~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~-----~~~~h~~~v~~~~~s~d~~~las~~~---------dg~i~iwd  113 (683)
                      ..+.|.+|++++ +..++.+.+||+.+++...     .|..|...|.++.|||||++||.++.         ++.+.|||
T Consensus        20 ~~~~W~~d~~~~-~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d   98 (470)
T d2bgra1          20 YSLRWISDHEYL-YKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD   98 (470)
T ss_dssp             CCCEECSSSEEE-EESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             cCCEeCCCCEEE-EEcCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEE
Confidence            346688999766 4567889999999998654     35566788999999999999998753         46789999


Q ss_pred             CCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccc----------
Q psy15995        114 TVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHP----------  183 (683)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~----------  183 (683)
                      +.+++.. .+..++              ..+..+.|||||++||.. .++.+.+|+..+++.........          
T Consensus        99 ~~~~~~~-~l~~~~--------------~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d  162 (470)
T d2bgra1          99 LNKRQLI-TEERIP--------------NNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITD  162 (470)
T ss_dssp             TTTTEEC-CSSCCC--------------TTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCC
T ss_pred             CCCCccc-ccccCC--------------ccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccc
Confidence            9988643 344443              567889999999999986 46789999999886543322110          


Q ss_pred             ------cCCCeeEEEEcCCCCeEEEEecCCceE--EEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEE
Q psy15995        184 ------IGGPIKDIAWSPDNQRMVVVGEGRERF--GHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIA  255 (683)
Q Consensus       184 ------~~~~i~~~~~s~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~  255 (683)
                            ..+....+.|||||++++....+....  ..+......      .........+.+...+.     ...+..+.
T Consensus       163 ~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~g~-----~~~~~~~~  231 (470)
T d2bgra1         163 WVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE------SLQYPKTVRVPYPKAGA-----VNPTVKFF  231 (470)
T ss_dssp             HHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCST------TCSSCEEEEEECCBTTS-----CCCEEEEE
T ss_pred             eeeeeeecCCccccEECCCCCccceeEecCCcCceEEEEeeccC------CCCCCeeeeeccccccc-----cCCcceEE
Confidence                  123456788999999999986543321  111111100      00111122222222221     12334677


Q ss_pred             EEcCCCCceeeecc-----------ccccCeEEEEECCCCCEEEEEc-CCC-----cEEEEeCCCCeeEEeccCC-----
Q psy15995        256 VFEGPPFKFKMTKQ-----------EHSRFVQAVRYSPSGSHFASAG-FDG-----KVFLYDGASADLVSELGNP-----  313 (683)
Q Consensus       256 iw~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~~~-~dg-----~i~iw~~~~~~~~~~~~~~-----  313 (683)
                      +|++..++......           .....+..+.|.++++.++... ..+     .+..+|..++.........     
T Consensus       232 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~tg~~~~~~~~~~~~~~  311 (470)
T d2bgra1         232 VVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMS  311 (470)
T ss_dssp             EEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEEC
T ss_pred             EEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCCCcEEEEEEEeeeeee
Confidence            88876655433221           2234567889999887555432 222     2344455566544332110     


Q ss_pred             ------ccccCeEEEEEccCC--CEEEEEECCCcEEEE--ECCCCceeeEEEecCcceeceEEEEecCCEEE-EEecCC-
Q psy15995        314 ------AHKGGVYAVAWKPDG--TQLLTASGDKTCKLW--DIETKSVVSEFIMGNQVEDQQVSCLWQGDYLL-TVSLSG-  381 (683)
Q Consensus       314 ------~~~~~i~~~~~~~~~--~~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~g-  381 (683)
                            .+...  ...+.+++  ..++....+|..++|  +...+... .+ .........+ ..++++.++ ++..++ 
T Consensus       312 ~~~~i~~~~~~--~~~~~~~~~~~~~~~s~~dg~~~ly~~~~~g~~~~-~l-t~g~~~v~~~-~~~d~~~iyf~a~~~~~  386 (470)
T d2bgra1         312 TTGWVGRFRPS--EPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FI-TKGTWEVIGI-EALTSDYLYYISNEYKG  386 (470)
T ss_dssp             SSSCSSSSSCC--CCEECTTSSEEEEEEECTTSCEEEEEEETTCSCCE-ES-CCSSSCEEEE-EEECSSEEEEEESCGGG
T ss_pred             ccceeecccCC--CceeeecCCCcEEEEeccCcCceeEEEeccCCcee-ee-ccCCeeEEEE-EEECCCEEEEEEecCCC
Confidence                  01111  22344433  345566677765555  55443332 22 2222222222 344556554 333322 


Q ss_pred             ---cEEEEe--cCCCCcce---eeeeeccccEEEEEEeCCCCEEEE---EeCCCcEEEEcCCCCCcceec
Q psy15995        382 ---FISYLD--VNNPSTPI---RVIKGHNKPITALALSPDRGTVFT---GSHDGFITRWNAKTGENDRVQ  440 (683)
Q Consensus       382 ---~i~~~~--~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~---~~~dg~i~~w~~~~~~~~~~~  440 (683)
                         .-.+|.  +.......   ..+..|...+..++|||||++++.   +...-.+.+|+..+++.+..+
T Consensus       387 ~p~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~~~~g~~v~~l  456 (470)
T d2bgra1         387 MPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL  456 (470)
T ss_dssp             CTTCBEEEEEETTCTTCEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEE
T ss_pred             CcceEEEEEEECCCCCceeEecccccCCCCCEEEEEECCCCCEEEEEecCCCCCeEEEEECCCCCEEEEE
Confidence               223444  44322211   123467888999999999999883   333445889998888776665

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.74  E-value=8.6e-17  Score=153.98  Aligned_cols=293  Identities=10%  Similarity=-0.053  Sum_probs=189.0

Q ss_pred             CCeEEEeeCCCCCeE--EEec----CCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEec----------CCCC
Q psy15995         45 GQPIVLGGDPKGKNF--LYTN----GNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD----------ISGK  108 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l--~~~~----~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~----------~dg~  108 (683)
                      +.....+.++|++..  +...    ...+.+||..+++.+.++.++..+  .++|+|||++|++.+          .|+.
T Consensus        20 g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~   97 (368)
T d1mdah_          20 GSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDY   97 (368)
T ss_dssp             CCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEE
T ss_pred             CCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccCCe
Confidence            444455668888864  3322    246888899999998888777655  589999999998754          4677


Q ss_pred             EEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec-CCccEEEEeccccceeeecccccc---
Q psy15995        109 VRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD-ISGKVRIWDTVNKEHILKNEFHPI---  184 (683)
Q Consensus       109 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~---  184 (683)
                      |.+||..+++.+..+..+.....       ........++|+|||++|+++. .++.+.+||+.+++..........   
T Consensus        98 v~v~D~~t~~~~~~i~~p~~~~~-------~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~  170 (368)
T d1mdah_          98 VEVFDPVTFLPIADIELPDAPRF-------SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI  170 (368)
T ss_dssp             EEEECTTTCCEEEEEEETTSCSC-------CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC
T ss_pred             EEEEECCCCcEeeeecCCcccee-------cccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE
Confidence            99999999988877665431110       0012345789999999998775 579999999999887655443321   


Q ss_pred             --CCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC
Q psy15995        185 --GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF  262 (683)
Q Consensus       185 --~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~  262 (683)
                        .+....+++++||+.++....+.........      ......+...+....+.+++.. +.+  .++.+.+++....
T Consensus       171 ~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~-~~~--~~~~v~~~~~~~~  241 (368)
T d1mdah_         171 HPGAAATHYLGSCPASLAASDLAAAPAAAGIVG------AQCTGAQNCSSQAAQANYPGML-VWA--VASSILQGDIPAA  241 (368)
T ss_dssp             EEEETTEEECCCCTTSCEEEECCSSCCCCEECC------CCSCTTSCBCSCCEEETTTTEE-EEC--BSSCCEEEECCSS
T ss_pred             ccCCCceEEEEcCCCCEEEEEecCCceeeeeee------cccccccccceeecccccCcEE-EEe--cCCCEEEEeecCC
Confidence              1233456677777766655443321111100      0112234444556666666642 322  2344555554433


Q ss_pred             ceeeec--cc----------cccCeEEEEECCCCCEEEEEcCC---------CcEEEEeCCCCeeEEeccCCccccCeEE
Q psy15995        263 KFKMTK--QE----------HSRFVQAVRYSPSGSHFASAGFD---------GKVFLYDGASADLVSELGNPAHKGGVYA  321 (683)
Q Consensus       263 ~~~~~~--~~----------~~~~v~~~~~~~~~~~l~~~~~d---------g~i~iw~~~~~~~~~~~~~~~~~~~i~~  321 (683)
                      ......  ..          .......+++++++..++....+         ..|.+||..+++.+..+.   +...+.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~---~~~~~~~  318 (368)
T d1mdah_         242 GATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS---NGHDSDA  318 (368)
T ss_dssp             CCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE---EEEEECE
T ss_pred             ceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEec---CCCceeE
Confidence            322211  11          11223457889998877665332         359999999999888875   5567889


Q ss_pred             EEEccCCCE--EEEEECCCcEEEEECCCCceeeEEEecC
Q psy15995        322 VAWKPDGTQ--LLTASGDKTCKLWDIETKSVVSEFIMGN  358 (683)
Q Consensus       322 ~~~~~~~~~--l~~~~~dg~i~iwd~~~~~~~~~~~~~~  358 (683)
                      ++|+||++.  +++...++.|++||..+++.+.++..+.
T Consensus       319 ~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~  357 (368)
T d1mdah_         319 IIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK  357 (368)
T ss_dssp             EEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred             EEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECCC
Confidence            999999973  3455678999999999999988876543

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.73  E-value=6.7e-16  Score=153.15  Aligned_cols=160  Identities=17%  Similarity=0.173  Sum_probs=115.9

Q ss_pred             eeeEeeccceEEEeecCCccEEEEeccccceeee---ccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCc
Q psy15995        145 RNILVLSIGFYIASGDISGKVRIWDTVNKEHILK---NEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTS  221 (683)
Q Consensus       145 ~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~  221 (683)
                      ..+.|.++++++..  .++.+.+||+.+++....   ..+..+...|.++.|||||++|+.......             
T Consensus        20 ~~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~-------------   84 (470)
T d2bgra1          20 YSLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVK-------------   84 (470)
T ss_dssp             CCCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEE-------------
T ss_pred             cCCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcc-------------
Confidence            35678999998874  478899999999875432   234455577899999999999887654310             


Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeC
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDG  301 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~  301 (683)
                                             +.--+.++.+.+||+.+++ ...+..+...+..+.|||||+.+|... ++.+++|+.
T Consensus        85 -----------------------~~r~s~~~~~~l~d~~~~~-~~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~  139 (470)
T d2bgra1          85 -----------------------QWRHSYTASYDIYDLNKRQ-LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIE  139 (470)
T ss_dssp             -----------------------CSSSCEEEEEEEEETTTTE-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESS
T ss_pred             -----------------------eeeeccCceEEEEECCCCc-ccccccCCccccccccccCcceeeEee-cccceEEEC
Confidence                                   1112335778999999876 455778889999999999999999865 788999999


Q ss_pred             CCCeeEEeccCCc----------------cccCeEEEEEccCCCEEEEEECCCc-EEEEE
Q psy15995        302 ASADLVSELGNPA----------------HKGGVYAVAWKPDGTQLLTASGDKT-CKLWD  344 (683)
Q Consensus       302 ~~~~~~~~~~~~~----------------~~~~i~~~~~~~~~~~l~~~~~dg~-i~iwd  344 (683)
                      .+++..+......                ..+....+.|+|||++|+....|.. +..|.
T Consensus       140 ~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~  199 (470)
T d2bgra1         140 PNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIE  199 (470)
T ss_dssp             TTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEE
T ss_pred             CCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEE
Confidence            9887765543210                1223456789999999999876543 44443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.70  E-value=1.4e-15  Score=145.33  Aligned_cols=126  Identities=14%  Similarity=-0.100  Sum_probs=91.2

Q ss_pred             CCcCeEEEEeecCCCeEEEE--eeCCCe--EEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEc----------CC
Q psy15995        228 QSKPINSCDFKPSRPFRIIT--GSEDNT--IAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAG----------FD  293 (683)
Q Consensus       228 ~~~~v~~~~~~~~~~~~l~~--~~~d~~--i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d  293 (683)
                      +.++...++..++++...++  ...++.  +.+||..+++.+.....+...  .++|+|||+.|++.+          .|
T Consensus        18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d   95 (368)
T d1mdah_          18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRT   95 (368)
T ss_dssp             CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEE
T ss_pred             cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccC
Confidence            34444555667777643333  344444  667799999988888766654  589999999888754          36


Q ss_pred             CcEEEEeCCCCeeEEeccCCcc-----ccCeEEEEEccCCCEEEEEE-CCCcEEEEECCCCceeeEEE
Q psy15995        294 GKVFLYDGASADLVSELGNPAH-----KGGVYAVAWKPDGTQLLTAS-GDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       294 g~i~iw~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~  355 (683)
                      +.|.+||..+++.+..+..+..     ......++|+|||++++++. .++.+.+||+.+++....+.
T Consensus        96 ~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~  163 (368)
T d1mdah_          96 DYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTK  163 (368)
T ss_dssp             EEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEE
T ss_pred             CeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEee
Confidence            7799999999998887754211     12234689999999998876 47899999999988776653

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.68  E-value=1.5e-16  Score=149.11  Aligned_cols=332  Identities=7%  Similarity=0.001  Sum_probs=193.9

Q ss_pred             eEEEEeeCCCeEEEEcCCCCceeeeccc------------------------------cccCeEEEEECCCCCEEEEE-c
Q psy15995        243 FRIITGSEDNTIAVFEGPPFKFKMTKQE------------------------------HSRFVQAVRYSPSGSHFASA-G  291 (683)
Q Consensus       243 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~------------------------------~~~~v~~~~~~~~~~~l~~~-~  291 (683)
                      +.+++++.+|.|++|++.+++.+..+.-                              |.........+|||++|++. .
T Consensus        12 y~f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~   91 (441)
T d1qnia2          12 YGFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDK   91 (441)
T ss_dssp             EEEEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEET
T ss_pred             EEEEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcC
Confidence            4688899999999999998887766421                              22234455567899988665 4


Q ss_pred             CCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEE--EEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEe
Q psy15995        292 FDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQL--LTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLW  369 (683)
Q Consensus       292 ~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l--~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  369 (683)
                      .+++|.++|+.+++....+..+ +...+..++|+|+++.+  +..+. ..+.+  ...++....     .          
T Consensus        92 ~~~rVavIDl~t~k~~~ii~iP-~g~gphgi~~spdg~t~YV~~~~~-~~v~~--~~dg~~~~~-----~----------  152 (441)
T d1qnia2          92 ANTRVARIRLDIMKTDKITHIP-NVQAIHGLRLQKVPKTNYVFCNAE-FVIPQ--PNDGTDFSL-----D----------  152 (441)
T ss_dssp             TTTEEEEEETTTTEEEEEEECT-TCCCEEEEEECCSSBCCEEEEEEC-SCEES--SCSSSCCCG-----G----------
T ss_pred             CCCEEEEEECCCCcEeeEEecC-CCCCccceEEeccCCEEEEEeccC-Ccccc--cCccccccc-----c----------
Confidence            6789999999999988766542 56789999999999854  33333 33332  011111000     0          


Q ss_pred             cCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCC-cEEEEcCCCCCcceeccCCCCcce
Q psy15995        370 QGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDG-FITRWNAKTGENDRVQGAGHGNQI  448 (683)
Q Consensus       370 ~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~~w~~~~~~~~~~~~~~~~~~v  448 (683)
                       ..       ...+..+|....... ..+.. ......+.++|+|+++++++.+. .+..++..+...............
T Consensus       153 -~~-------~~~~~~iD~~t~~v~-~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~  222 (441)
T d1qnia2         153 -NS-------YTMFTAIDAETMDVA-WQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERI  222 (441)
T ss_dssp             -GE-------EEEEEEEETTTCSEE-EEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHH
T ss_pred             -cc-------cceEEeecCccceee-EEEec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccce
Confidence             00       011223343332221 22221 23467789999999999887653 233333322222211110000000


Q ss_pred             eEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEE
Q psy15995        449 NGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSIS  528 (683)
Q Consensus       449 ~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  528 (683)
                      ..+..+++++.. +.++.+.+++....                                     .....++....+..+.
T Consensus       223 ~~~~~dGk~~~v-~~~~v~vvd~~~~~-------------------------------------~v~~~IPvgksPhGv~  264 (441)
T d1qnia2         223 AAAVKAGNFKTI-GDSKVPVVDGRGES-------------------------------------EFTRYIPVPKNPHGLN  264 (441)
T ss_dssp             HHHHHTTCCBCC-TTCCCCEEECSSSC-------------------------------------SSEEEECCBSSCCCEE
T ss_pred             EEEecCCCEEEe-CCCCcEEEEcccCC-------------------------------------ceEEEEeCCCCccCce
Confidence            001111332222 22344444443322                                     2344556666788999


Q ss_pred             EccCCCEEEE-EcCCCcEEEEEcCCCccCcceee----------cCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCC-
Q psy15995        529 LDHEHGLVAV-GGADSKVHIYELNNKSLSPKAEL----------DHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDF-  596 (683)
Q Consensus       529 ~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~----------~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~-  596 (683)
                      ++|||+++++ +..+++|.+||+++......-.+          ...-.....+|+++|..+.+...|.+|..|++... 
T Consensus       265 vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~  344 (441)
T d1qnia2         265 TSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAI  344 (441)
T ss_dssp             ECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHH
T ss_pred             ECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcccccceEEEeccchhh
Confidence            9999998755 56789999999865321100001          11122455689999999999999999999998521 


Q ss_pred             ---------ccccc---cceeeecccEEEEEecCCCCeEEEe---ecCC----------cEEEEeCCCCc
Q psy15995        597 ---------ELAHN---KEWGFHSAKVNCVAWSPDSALVASG---SLDT----------TIIIWSLASPA  641 (683)
Q Consensus       597 ---------~~~~~---~~~~~h~~~v~~~~~s~d~~~l~~~---~~d~----------~v~iw~~~~~~  641 (683)
                               .....   .-..+|...+.+.+++|||++|+++   +.|.          +-.+.|+...+
T Consensus       345 ~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k~s~dr~~~~g~~~~~~~q~~~i~~~~  414 (441)
T d1qnia2         345 KHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSKFSKDRFLPVGPLHPENDQLIDISGEE  414 (441)
T ss_dssp             HHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEESCCGGGSCCCSSSCCEEEEEEECSSSS
T ss_pred             hhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecCccccccCcCCCCCCCccceeEEecCCe
Confidence                     11110   1113588888888999999999999   5564          34566665443

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.66  E-value=1.3e-16  Score=149.39  Aligned_cols=316  Identities=9%  Similarity=-0.010  Sum_probs=198.7

Q ss_pred             EEEecCCCCEEEEeCCCcccccccccc-cCCCCcccc--------------e-eeeeecceeeeEeeccceEEEee-cCC
Q psy15995        100 IASGDISGKVRIWDTVNKEHILKNEFH-PIGGPIKDI--------------G-TLLSLTSIRNILVLSIGFYIASG-DIS  162 (683)
Q Consensus       100 las~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~--------------~-~~~~~~~i~~~~~s~~~~~l~~~-~~d  162 (683)
                      ++|++.+|+|+||++.+++.+.++..- +.+......              . --.+.........+|||++|++. ..+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            467889999999999999888776532 111111000              0 01122334555678999999655 567


Q ss_pred             ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCc-----------------eEEEEEEccCCCceeee
Q psy15995        163 GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE-----------------RFGHVFMSETGTSVGEI  225 (683)
Q Consensus       163 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~-----------------~~~~~~~~~~~~~~~~~  225 (683)
                      +.|.++|+.+++.......+ ....+..++|+||++.+.++.....                 ..+..++..+.+...++
T Consensus        94 ~rVavIDl~t~k~~~ii~iP-~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI  172 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIP-NVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQV  172 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECT-TCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEE
T ss_pred             CEEEEEECCCCcEeeEEecC-CCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEE
Confidence            89999999998765544433 3467899999999986554432211                 11234555555555555


Q ss_pred             ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCe
Q psy15995        226 SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASAD  305 (683)
Q Consensus       226 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  305 (683)
                      ... .....+.|+|++++.++++.....+..++..+.+....+... ..-..++++|+|+++..++ ++.+.+++....+
T Consensus       173 ~v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~-n~p~~~~~~~dGk~~~v~~-~~v~vvd~~~~~~  249 (441)
T d1qnia2         173 IVD-GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVF-NVERIAAAVKAGNFKTIGD-SKVPVVDGRGESE  249 (441)
T ss_dssp             EES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEE-EHHHHHHHHHTTCCBCCTT-CCCCEEECSSSCS
T ss_pred             ecC-CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeC-CccceEEEecCCCEEEeCC-CCcEEEEcccCCc
Confidence            433 457889999999985554444344444443333322222111 1112345678898776544 6788888877777


Q ss_pred             eEEeccCCccccCeEEEEEccCCCEEEE-EECCCcEEEEECCCCce--------eeEEE--ecCcceeceEEEEecCCEE
Q psy15995        306 LVSELGNPAHKGGVYAVAWKPDGTQLLT-ASGDKTCKLWDIETKSV--------VSEFI--MGNQVEDQQVSCLWQGDYL  374 (683)
Q Consensus       306 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~--------~~~~~--~~~~~~~~~~~~~~~~~~l  374 (683)
                      .+..+..  . .....+.++|||+++++ +..++++.+||+++...        ...+.  ...........+.+++..+
T Consensus       250 v~~~IPv--g-ksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~y  326 (441)
T d1qnia2         250 FTRYIPV--P-KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAY  326 (441)
T ss_dssp             SEEEECC--B-SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEE
T ss_pred             eEEEEeC--C-CCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEE
Confidence            7777753  3 34678999999998765 45689999999865321        11111  1122233445666777788


Q ss_pred             EEEecCCcEEEEecCC---------CCcceeee-----eeccccEEEEEEeCCCCEEEEEeC
Q psy15995        375 LTVSLSGFISYLDVNN---------PSTPIRVI-----KGHNKPITALALSPDRGTVFTGSH  422 (683)
Q Consensus       375 ~~~~~~g~i~~~~~~~---------~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~  422 (683)
                      .+...+..|..|++..         ....+..+     .+|...+.+.+++|||++|++++.
T Consensus       327 ts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k  388 (441)
T d1qnia2         327 TTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSK  388 (441)
T ss_dssp             EEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEES
T ss_pred             EcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecCc
Confidence            8888999999999742         11122222     577777777889999999999954

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.47  E-value=2e-11  Score=114.84  Aligned_cols=262  Identities=9%  Similarity=0.010  Sum_probs=154.8

Q ss_pred             CeEEEeeCCCCCeEEEecCCeEEEEeCCCCccccccc--CcccceEEEEECCCCcE--EEEec-CCCCEEEEeCCCcccc
Q psy15995         46 QPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYT--EHSCAVNVAKYSPSGFY--IASGD-ISGKVRIWDTVNKEHI  120 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~--~h~~~v~~~~~s~d~~~--las~~-~dg~i~iwd~~~~~~~  120 (683)
                      .+..|++|||+++|.++..+.+..|.+.....+..+.  ........++++++++.  ++++. ..++|..+.+...   
T Consensus        41 ~~s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~---  117 (365)
T d1jofa_          41 PISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF---  117 (365)
T ss_dssp             CCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS---
T ss_pred             CCCEEEEcCCCCEEEEEeCCcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCC---
Confidence            4567999999999998888888888776432222221  12334567889999984  44433 3455555543222   


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeE
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRM  200 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  200 (683)
                                                      +........+...++...     ...... .....+.+++|+|||+++
T Consensus       118 --------------------------------~~~~~~~~~~~~~~~~~~-----~~~~~~-q~~~h~h~v~~sPdG~~l  159 (365)
T d1jofa_         118 --------------------------------AGYGNVFSVSETGKLEKN-----VQNYEY-QENTGIHGMVFDPTETYL  159 (365)
T ss_dssp             --------------------------------CCEEEEEEECTTCCEEEE-----EEEEEC-CTTCCEEEEEECTTSSEE
T ss_pred             --------------------------------CCcceeEeeeecceecCc-----ccCccc-CCCCcceEEEECCCCCEE
Confidence                                            111111100101111100     000011 112347899999999999


Q ss_pred             EEEecCCceEEEEEEcc-CCCce--eee--ecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc------
Q psy15995        201 VVVGEGRERFGHVFMSE-TGTSV--GEI--SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ------  269 (683)
Q Consensus       201 ~~~~~~~~~~~~~~~~~-~~~~~--~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~------  269 (683)
                      +++..+.+. +.++..+ .+...  ...  .........++|+|++++..++...+++|.+|+....+......      
T Consensus       160 ~v~d~g~d~-v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~  238 (365)
T d1jofa_         160 YSADLTANK-LWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPL  238 (365)
T ss_dssp             EEEETTTTE-EEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEES
T ss_pred             EEeeCCCCE-EEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeecc
Confidence            998876665 3444444 33322  111  22356789999999999867777789999999976654321110      


Q ss_pred             -------------ccccCeEEEEECCCCCEEEEEcC------CCcEEEEeCCCCeeEEe----ccCCccccCeEEEEEcc
Q psy15995        270 -------------EHSRFVQAVRYSPSGSHFASAGF------DGKVFLYDGASADLVSE----LGNPAHKGGVYAVAWKP  326 (683)
Q Consensus       270 -------------~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iw~~~~~~~~~~----~~~~~~~~~i~~~~~~~  326 (683)
                                   .+......+.++|+|++|+++..      .+.|..|++.....+..    ...........+++++|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p  318 (365)
T d1jofa_         239 IPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCP  318 (365)
T ss_dssp             SCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECT
T ss_pred             ccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecC
Confidence                         12234567899999999888743      22377777654322211    11111334567799998


Q ss_pred             -CCCEEEEEE-CCCcEEEEECCCCc
Q psy15995        327 -DGTQLLTAS-GDKTCKLWDIETKS  349 (683)
Q Consensus       327 -~~~~l~~~~-~dg~i~iwd~~~~~  349 (683)
                       +|++|+++. .++.|.+|++....
T Consensus       319 ~~G~~l~va~~~s~~v~v~~~~~~~  343 (365)
T d1jofa_         319 WSDEWMAITDDQEGWLEIYRWKDEF  343 (365)
T ss_dssp             TCTTEEEEECSSSCEEEEEEEETTE
T ss_pred             CCCCEEEEEeCCCCeEEEEEEeCCc
Confidence             789887774 57889999876543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.44  E-value=4.8e-11  Score=107.78  Aligned_cols=240  Identities=12%  Similarity=0.071  Sum_probs=148.6

Q ss_pred             eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCC---CEEEEeCCCcccccccccccCCCCcccceeeeeec
Q psy15995         66 SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISG---KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLT  142 (683)
Q Consensus        66 ~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (683)
                      .|.|.|.+...... +..+...+...+|||||++||......   .+.+.+...+........               ..
T Consensus        20 ~l~i~d~dG~~~~~-l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~   83 (269)
T d2hqsa1          20 ELRVSDYDGYNQFV-VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF---------------PR   83 (269)
T ss_dssp             EEEEEETTSCSCEE-EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC---------------SS
T ss_pred             EEEEEcCCCCCcEE-EecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEeee---------------ec
Confidence            58898987665544 555677889999999999999764332   366666655543222111               14


Q ss_pred             ceeeeEeeccceEEEeecC-CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCc-eEEEEEEccCCC
Q psy15995        143 SIRNILVLSIGFYIASGDI-SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE-RFGHVFMSETGT  220 (683)
Q Consensus       143 ~i~~~~~s~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~-~~~~~~~~~~~~  220 (683)
                      ......|+|+|+.++.... ++...++........ ...............+++++..+........ ..+.....+.+ 
T Consensus        84 ~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~-  161 (269)
T d2hqsa1          84 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG-  161 (269)
T ss_dssp             CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS-
T ss_pred             ccccceecCCCCeeeEeeecCCccceeeccccccc-ceeeeeccccccccccccccccceecccccCCceEeeeecccc-
Confidence            5677889999998886443 333333322221111 1112222344556678888887777664332 22344444443 


Q ss_pred             ceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC---CCcEE
Q psy15995        221 SVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF---DGKVF  297 (683)
Q Consensus       221 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~  297 (683)
                      ....+..+........|+|++..++......+...+|.............+........|+|||+.|+..+.   ...++
T Consensus       162 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~  241 (269)
T d2hqsa1         162 APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLN  241 (269)
T ss_dssp             CCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred             cceeeecccccccccccccccceeEEEeecCCceeeeEeecccccceEeecCccccceEECCCCCEEEEEEcCCCCcEEE
Confidence            334445566777888999999986666666666666544333323334445566788899999998875543   34688


Q ss_pred             EEeCCCCeeEEeccCCccccCeEEEEEcc
Q psy15995        298 LYDGASADLVSELGNPAHKGGVYAVAWKP  326 (683)
Q Consensus       298 iw~~~~~~~~~~~~~~~~~~~i~~~~~~~  326 (683)
                      ++++..+...+ +..  ..+.+...+|+|
T Consensus       242 ~~~~dg~~~~~-lt~--~~g~~~~p~WSP  267 (269)
T d2hqsa1         242 LVSTDGRFKAR-LPA--TDGQVKFPAWSP  267 (269)
T ss_dssp             EEETTSCCEEE-CCC--SSSEEEEEEECC
T ss_pred             EEECCCCCEEE-EeC--CCCcEEeEEeCC
Confidence            99988776544 332  566788889998

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=3.1e-10  Score=109.88  Aligned_cols=365  Identities=10%  Similarity=0.003  Sum_probs=199.5

Q ss_pred             EeeCCCCCeEEEecCCeEEEEeCCCCcccccccC---cccceEEEEECCCCcEEEEec---------CCCCEEEEeCCCc
Q psy15995         50 LGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTE---HSCAVNVAKYSPSGFYIASGD---------ISGKVRIWDTVNK  117 (683)
Q Consensus        50 ~~~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~---h~~~v~~~~~s~d~~~las~~---------~dg~i~iwd~~~~  117 (683)
                      ..|.+++.++....++.|.+||+++++....+..   ....+....|||||++|+...         ..+.+.++|+.++
T Consensus        22 ~~W~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~  101 (465)
T d1xfda1          22 AKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG  101 (465)
T ss_dssp             CCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC
T ss_pred             CEEeCCCcEEEEeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCC
Confidence            3588999887766788999999998875433333   234677889999999987753         3467889999887


Q ss_pred             ccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccC------------
Q psy15995        118 EHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIG------------  185 (683)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------------  185 (683)
                      +...-.....            ....+....|||||+.||... ++.|.+.+..++....... .+..            
T Consensus       102 ~~~~l~~~~~------------~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~-~g~~~~i~nG~~d~vy  167 (465)
T d1xfda1         102 DPQSLDPPEV------------SNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVS-TGKEGVIYNGLSDWLY  167 (465)
T ss_dssp             CCEECCCTTC------------CSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEEC-CCBTTTEEEEECCHHH
T ss_pred             ceeeccCccC------------CccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEec-ccCcceeeccccchhh
Confidence            5432211110            003455678999999998876 5678888887665433221 1111            


Q ss_pred             -----CCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCC
Q psy15995        186 -----GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP  260 (683)
Q Consensus       186 -----~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~  260 (683)
                           +.-.++-|||||++||....+....-.+.....+      ......+..+.+..-|..     .....+.++|+.
T Consensus       168 eee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~------~~~~p~~~~~~Yp~~G~~-----np~~~l~v~d~~  236 (465)
T d1xfda1         168 EEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYT------GSIYPTVKPYHYPKAGSE-----NPSISLHVIGLN  236 (465)
T ss_dssp             HHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCS------SSSSCCCEEEECCBTTSC-----CCEEEEEEEESS
T ss_pred             hhhhccccceEEECCCCCeEEEEEecccccceeeccccc------ccccceeeeeeccccCCC-----CCceeEEEEecC
Confidence                 1125788999999999876443221111111100      011112233333222211     111246667766


Q ss_pred             CCceeeec------cccccCeEEEEECCCCCEEEEEcC-C---CcEEEEeCCCCeeEEeccCCccccC----eEEEEEcc
Q psy15995        261 PFKFKMTK------QEHSRFVQAVRYSPSGSHFASAGF-D---GKVFLYDGASADLVSELGNPAHKGG----VYAVAWKP  326 (683)
Q Consensus       261 ~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~-d---g~i~iw~~~~~~~~~~~~~~~~~~~----i~~~~~~~  326 (683)
                      .+......      ......+..+.|+++++.++.... +   ..+.++|..+++....+.. .....    -....|++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e-~~~~wv~~~~~~p~~~~  315 (465)
T d1xfda1         237 GPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED-ESEAWLHRQNEEPVFSK  315 (465)
T ss_dssp             SSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE-ECSSCCCCCCCCCEECT
T ss_pred             CCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEE-cCCceEeccCCceeEcc
Confidence            55432211      122335788999999986655432 2   2588899999877655432 11221    13457889


Q ss_pred             CCCEEEE--EE-CCC--cEEEEECC------CCceeeEEEecCcceeceEEEEecCCEEEEEe-cC--CcEEEEecC--C
Q psy15995        327 DGTQLLT--AS-GDK--TCKLWDIE------TKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVS-LS--GFISYLDVN--N  390 (683)
Q Consensus       327 ~~~~l~~--~~-~dg--~i~iwd~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~--g~i~~~~~~--~  390 (683)
                      ||+.++.  .+ .+|  .+....+.      .++....+..+.-.-...+.+..+++.++..+ .+  +.-.+|.+.  .
T Consensus       316 dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g  395 (465)
T d1xfda1         316 DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVG  395 (465)
T ss_dssp             TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSST
T ss_pred             CCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCC
Confidence            9885432  22 232  34433321      12222222222211122345566666665443 32  233445443  2


Q ss_pred             CCcc--eeeeeeccccEEEEEEeCCCCEEEEEeCC---CcEEEEcCCCCCcceec
Q psy15995        391 PSTP--IRVIKGHNKPITALALSPDRGTVFTGSHD---GFITRWNAKTGENDRVQ  440 (683)
Q Consensus       391 ~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~w~~~~~~~~~~~  440 (683)
                      ....  +............+.|+|++++++.....   -.+.+++..+++.+..+
T Consensus       396 ~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~~~~~~L  450 (465)
T d1xfda1         396 NFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDL  450 (465)
T ss_dssp             TCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCEEEEE
T ss_pred             CCcceeeccccCCCCCEEEEEECCCCCEEEEEeecCCCCeEEEEECCCCCEEEEE
Confidence            2111  11111234456789999999999855443   35677776666655443

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.32  E-value=1.8e-09  Score=101.23  Aligned_cols=183  Identities=13%  Similarity=0.131  Sum_probs=107.4

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCc
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTS  221 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~  221 (683)
                      ..+..+++++++++|.+... +.+..|.+.....+..............++++++++.+.+...+               
T Consensus        40 ~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~---------------  103 (365)
T d1jofa_          40 EPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAK---------------  103 (365)
T ss_dssp             CCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECS---------------
T ss_pred             CCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEec---------------
Confidence            34567999999999888754 56777777653323222222334566788999999866554432               


Q ss_pred             eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC-CCcEEEEe
Q psy15995        222 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF-DGKVFLYD  300 (683)
Q Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~  300 (683)
                           .+...|....+.+++.. ......+...++..    ............+.++.|+|+|+++++++. ...|.+|+
T Consensus       104 -----~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~  173 (365)
T d1jofa_         104 -----QPPYAVYANPFYKFAGY-GNVFSVSETGKLEK----NVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHR  173 (365)
T ss_dssp             -----STTCCEEEEEESSSCCE-EEEEEECTTCCEEE----EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             -----CCCCEEEEeEccCCCCc-ceeEeeeecceecC----cccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEE
Confidence                 12334455555555432 22111111111111    000111112334789999999998887764 45788887


Q ss_pred             CCCC-ee--EEeccCCccccCeEEEEEccCCCEEEEEEC-CCcEEEEECCCCce
Q psy15995        301 GASA-DL--VSELGNPAHKGGVYAVAWKPDGTQLLTASG-DKTCKLWDIETKSV  350 (683)
Q Consensus       301 ~~~~-~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~  350 (683)
                      .... ..  ...............++|+|+++++++..+ ++.|.+|++..++.
T Consensus       174 ~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~  227 (365)
T d1jofa_         174 KLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATH  227 (365)
T ss_dssp             ECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred             ccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCc
Confidence            5432 22  222222224567899999999998877664 77899999876654

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=5e-09  Score=101.28  Aligned_cols=303  Identities=13%  Similarity=0.128  Sum_probs=166.1

Q ss_pred             EECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec---------CC
Q psy15995         92 KYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD---------IS  162 (683)
Q Consensus        92 ~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---------~d  162 (683)
                      .|.+++.++.. ..+|.|.+||+.+++....+......           ...+....+|||+++++...         ..
T Consensus        23 ~W~~~~~~~~~-~~~g~i~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~   90 (465)
T d1xfda1          23 KWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIE-----------SLRAIRYEISPDREYALFSYNVEPIYQHSYT   90 (465)
T ss_dssp             CBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTT-----------TTTCSEEEECTTSSEEEEEESCCCCSSSCCC
T ss_pred             EEeCCCcEEEE-eCCCcEEEEECCCCCEEEEEcCcccc-----------ccccceeEECCCCCeEEEEEcccceeEeecc
Confidence            58888877654 46788999999887653322222110           02456678999999887753         35


Q ss_pred             ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeec-CCcC----------
Q psy15995        163 GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISG-QSKP----------  231 (683)
Q Consensus       163 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----------  231 (683)
                      +.+.++|+.+++.............+....|||||+.+|.+..++   +.+.....+........ ....          
T Consensus        91 ~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~~n---l~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vy  167 (465)
T d1xfda1          91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENN---IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLY  167 (465)
T ss_dssp             SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTE---EEEESSSSSCCEEEECCCBTTTEEEEECCHHH
T ss_pred             ccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEecce---EEEEecCCCceEEEecccCcceeeccccchhh
Confidence            788999999886543333333345677799999999999988653   33444444443333221 1111          


Q ss_pred             -------eEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC
Q psy15995        232 -------INSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA  304 (683)
Q Consensus       232 -------v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  304 (683)
                             -..+.|+|+|+.+++.--.+..+..+.+....     ......+..+.+-.-|..-    ....+.++|+.++
T Consensus       168 eee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~-----~~~~p~~~~~~Yp~~G~~n----p~~~l~v~d~~~~  238 (465)
T d1xfda1         168 EEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYT-----GSIYPTVKPYHYPKAGSEN----PSISLHVIGLNGP  238 (465)
T ss_dssp             HHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCS-----SSSSCCCEEEECCBTTSCC----CEEEEEEEESSSS
T ss_pred             hhhhccccceEEECCCCCeEEEEEecccccceeeccccc-----ccccceeeeeeccccCCCC----CceeEEEEecCCC
Confidence                   24677999999744443344545444432110     0111223344443322211    1125777888766


Q ss_pred             eeEEeccCC----ccccCeEEEEEccCCCEEEEEEC-C---CcEEEEECCCCceeeEEEecCcc----eeceEEEEecCC
Q psy15995        305 DLVSELGNP----AHKGGVYAVAWKPDGTQLLTASG-D---KTCKLWDIETKSVVSEFIMGNQV----EDQQVSCLWQGD  372 (683)
Q Consensus       305 ~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~-d---g~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  372 (683)
                      ........+    ....-+..+.|+++++.++.... +   ..+.++|..+++....+......    ......+.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~  318 (465)
T d1xfda1         239 THDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGR  318 (465)
T ss_dssp             CCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSC
T ss_pred             cEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCC
Confidence            543322111    12234778899999886655433 2   24888999998876554433221    123445667777


Q ss_pred             EEEE---EecCC--cEEEEecC-----CCCcceeeeeeccccEEEE-EEeCCCCEEE
Q psy15995        373 YLLT---VSLSG--FISYLDVN-----NPSTPIRVIKGHNKPITAL-ALSPDRGTVF  418 (683)
Q Consensus       373 ~l~~---~~~~g--~i~~~~~~-----~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~  418 (683)
                      .++.   ...+|  .+..+.+.     ......+.+....-.|..+ .|+++++.++
T Consensus       319 ~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vy  375 (465)
T d1xfda1         319 KFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIY  375 (465)
T ss_dssp             SEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEE
T ss_pred             eeEEEEeeeecccCceEEEEeccccccCCCceeEEeccCCceEEEEEEEcCCCCEEE
Confidence            5432   22333  34443322     1122223333334445554 5777776665

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.30  E-value=1.3e-09  Score=96.86  Aligned_cols=239  Identities=13%  Similarity=0.042  Sum_probs=150.9

Q ss_pred             cceEEEEECCCCcEEEE-ecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCcc
Q psy15995         86 CAVNVAKYSPSGFYIAS-GDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGK  164 (683)
Q Consensus        86 ~~v~~~~~s~d~~~las-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~  164 (683)
                      ..-..++++++|+..++ .+..+.+..++......... ...             .......++++++|...++....+.
T Consensus        14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~-~~~-------------~~~~p~gvav~~~g~i~v~d~~~~~   79 (260)
T d1rwia_          14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL-PFN-------------GLYQPQGLAVDGAGTVYVTDFNNRV   79 (260)
T ss_dssp             CCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEEC-CCC-------------SCCSCCCEEECTTCCEEEEETTTEE
T ss_pred             CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEe-ccC-------------CccCceEEEEcCCCCEEEeeeeece
Confidence            44589999999986655 44557777776554422211 111             0134577899999998888887778


Q ss_pred             EEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeE
Q psy15995        165 VRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFR  244 (683)
Q Consensus       165 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  244 (683)
                      +++++-.+...+...  . .......+++.++++..++- ..... ...+....................+++.+++.. 
T Consensus        80 i~~~~~~~~~~~~~~--~-~~~~p~~iavd~~g~i~v~d-~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~-  153 (260)
T d1rwia_          80 VTLAAGSNNQTVLPF--D-GLNYPEGLAVDTQGAVYVAD-RGNNR-VVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNV-  153 (260)
T ss_dssp             EEECTTCSCCEECCC--C-SCCSEEEEEECTTCCEEEEE-GGGTE-EEEECTTCSSCEECCCCSCCSCCEEEECTTCCE-
T ss_pred             eeeeeeccceeeeee--e-eeeecccccccccceeEeec-ccccc-ccccccccceeeeeeecccCCcceeeecCCCCE-
Confidence            887776655433221  1 12567899999999865543 32221 233333222222212222345678999999884 


Q ss_pred             EEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEE
Q psy15995        245 IITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW  324 (683)
Q Consensus       245 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~  324 (683)
                      +++...++.|..++...................+++.++|+++++....+.|..++...... ..+.. ..-.....|++
T Consensus       154 ~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~-~~~~~-~~~~~P~~i~~  231 (260)
T d1rwia_         154 YVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS-TVLPF-TGLNTPLAVAV  231 (260)
T ss_dssp             EEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCC-EECCC-CSCCCEEEEEE
T ss_pred             eeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeE-EEEcc-CCCCCeEEEEE
Confidence            77778888999999776554444334556678999999999888888788899888654432 22221 13346789999


Q ss_pred             ccCCCEEEEEECCCcEEEEECC
Q psy15995        325 KPDGTQLLTASGDKTCKLWDIE  346 (683)
Q Consensus       325 ~~~~~~l~~~~~dg~i~iwd~~  346 (683)
                      +++++++++-..++.|+.++..
T Consensus       232 d~~g~l~vad~~~~rI~~i~~~  253 (260)
T d1rwia_         232 DSDRTVYVADRGNDRVVKLTSL  253 (260)
T ss_dssp             CTTCCEEEEEGGGTEEEEECCC
T ss_pred             eCCCCEEEEECCCCEEEEEeCC
Confidence            9999877776666666655543

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.27  E-value=2.8e-09  Score=94.69  Aligned_cols=239  Identities=10%  Similarity=-0.020  Sum_probs=149.6

Q ss_pred             cCCCeEEEeeCCCCCeEEEe--cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccc
Q psy15995         43 QRGQPIVLGGDPKGKNFLYT--NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHI  120 (683)
Q Consensus        43 ~~~~~~~~~~s~~~~~l~~~--~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~  120 (683)
                      ....+..++++++|+++++.  ..+.+..++...........+-......++++++|++.++....+.+++++-.+...+
T Consensus        12 ~~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~   91 (260)
T d1rwia_          12 FRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTV   91 (260)
T ss_dssp             SCCCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEE
T ss_pred             CcCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceee
Confidence            34567889999999976654  3467777766554333222222334678999999998888777777777765555433


Q ss_pred             cccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeE
Q psy15995        121 LKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRM  200 (683)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  200 (683)
                      .....               ......+++.++++++++-.....+..++........ .... .......+++.++++.+
T Consensus        92 ~~~~~---------------~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~-~~~~-~~~~p~~i~~~~~g~~~  154 (260)
T d1rwia_          92 LPFDG---------------LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV-LPFT-GLNDPDGVAVDNSGNVY  154 (260)
T ss_dssp             CCCCS---------------CCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEE-CCCC-SCCSCCEEEECTTCCEE
T ss_pred             eeeee---------------eeecccccccccceeEeeccccccccccccccceeee-eeec-ccCCcceeeecCCCCEe
Confidence            22211               1446788999999888877667777777766543211 1111 12456789999999865


Q ss_pred             EEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEE
Q psy15995        201 VVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRY  280 (683)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~  280 (683)
                      ++.... . .+..++.+.................+++.+++. ++++....+.|..++.............-.....|++
T Consensus       155 v~~~~~-~-~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~-l~vsd~~~~~i~~~~~~~~~~~~~~~~~~~~P~~i~~  231 (260)
T d1rwia_         155 VTDTDN-N-RVVKLEAESNNQVVLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAV  231 (260)
T ss_dssp             EEEGGG-T-EEEEECTTTCCEEECCCSSCCSEEEEEECTTCC-EEEEETTTTEEEEECTTCSCCEECCCCSCCCEEEEEE
T ss_pred             eecccc-c-cccccccccceeeeeeccccCCCccceeeeeee-eeeeecCCCEEEEEeCCCCeEEEEccCCCCCeEEEEE
Confidence            544333 2 234444443333332334556678999999987 3777777888888876544333222233356789999


Q ss_pred             CCCCCEEEEEcCCCcEEEEeC
Q psy15995        281 SPSGSHFASAGFDGKVFLYDG  301 (683)
Q Consensus       281 ~~~~~~l~~~~~dg~i~iw~~  301 (683)
                      +++|+.+++-..+++|+.++.
T Consensus       232 d~~g~l~vad~~~~rI~~i~~  252 (260)
T d1rwia_         232 DSDRTVYVADRGNDRVVKLTS  252 (260)
T ss_dssp             CTTCCEEEEEGGGTEEEEECC
T ss_pred             eCCCCEEEEECCCCEEEEEeC
Confidence            999987777666777776653

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.27  E-value=1.6e-09  Score=98.97  Aligned_cols=241  Identities=13%  Similarity=0.090  Sum_probs=149.8

Q ss_pred             CeEEEeeCCCCCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccc
Q psy15995         46 QPIVLGGDPKGKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNE  124 (683)
Q Consensus        46 ~~~~~~~s~~~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~  124 (683)
                      .+..++++|||+++++. .++.|..++.....  ..+......+.+++|++||+++++...++.+..|+.......... 
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~--~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~-  105 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQ--QIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET-  105 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCCE--EEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE-
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCCCE--EEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceee-
Confidence            35578999999998887 47889999866543  234556778999999999999999888888888886543211110 


Q ss_pred             cccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEe
Q psy15995        125 FHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVG  204 (683)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  204 (683)
                                +.........+.+++.++|+++++-+.++.+..++...+.......-.                      
T Consensus       106 ----------~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~----------------------  153 (302)
T d2p4oa1         106 ----------LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHP----------------------  153 (302)
T ss_dssp             ----------EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECG----------------------
T ss_pred             ----------ccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCC----------------------
Confidence                      011111245678889999998888888888887777654321110000                      


Q ss_pred             cCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeec--cccccCeEEEEECC
Q psy15995        205 EGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK--QEHSRFVQAVRYSP  282 (683)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~  282 (683)
                                    ................+.+..  ..++++.+..+.|..++..........  .........+++.+
T Consensus       154 --------------~~~~~~~~~~~~~~ngi~~~~--~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~  217 (302)
T d2p4oa1         154 --------------MLARSNSESVFPAANGLKRFG--NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDV  217 (302)
T ss_dssp             --------------GGSCSSTTCCSCSEEEEEEET--TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBT
T ss_pred             --------------ccceeeccCcccccccccccC--CceeeecCCCCeEEeccccccccccccccccCCCCCcceEECC
Confidence                          000000011112233444433  335666777788877776544322211  11233456799999


Q ss_pred             CCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEE---ccCCCEEEEEECCC
Q psy15995        283 SGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW---KPDGTQLLTASGDK  338 (683)
Q Consensus       283 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~l~~~~~dg  338 (683)
                      +|++.++...++.|..++.. ++..........-...++++|   .+|++.|++++..+
T Consensus       218 dG~l~va~~~~~~V~~i~p~-G~~~~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt~~g  275 (302)
T d2p4oa1         218 EGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG  275 (302)
T ss_dssp             TCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred             CCCEEEEEcCCCcEEEECCC-CCEEEEEecCCCCCCceEEEEcCCCCCCCEEEEECCCC
Confidence            99987777778999999865 443322222124456889999   67888888776543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.26  E-value=5.8e-09  Score=93.72  Aligned_cols=200  Identities=12%  Similarity=0.035  Sum_probs=128.8

Q ss_pred             cceeeeEeeccceEEEeecCC---ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccC
Q psy15995        142 TSIRNILVLSIGFYIASGDIS---GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSET  218 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~  218 (683)
                      ..+...+|||||++||.....   ..+.+.+...+....   ...+.+......|+|+|+.++.................
T Consensus        39 ~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~  115 (269)
T d2hqsa1          39 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ---VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA  115 (269)
T ss_dssp             SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE---EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred             CceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeE---EeeeecccccceecCCCCeeeEeeecCCccceeecccc
Confidence            456678999999999976443   346666776665332   23345778899999999999988765444333333333


Q ss_pred             CCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCe--EEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcCCC--
Q psy15995        219 GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNT--IAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDG--  294 (683)
Q Consensus       219 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--  294 (683)
                      ..................+++++...+++...++.  |.+.+....... .............|+|+++.++..+.++  
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~~~~~~~~~~~  194 (269)
T d2hqsa1         116 SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDADVSSDGKFMVMVSSNGGQ  194 (269)
T ss_dssp             TCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCSSSEEEEEEECTTSSEEEEEEECSSC
T ss_pred             cccceeeeeccccccccccccccccceecccccCCceEeeeecccccce-eeecccccccccccccccceeEEEeecCCc
Confidence            33344444455556667788888876777666664  444455554433 3344566677889999999888766544  


Q ss_pred             -cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECC---CcEEEEECCCCc
Q psy15995        295 -KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGD---KTCKLWDIETKS  349 (683)
Q Consensus       295 -~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~  349 (683)
                       .+.+.+...+... .+.   .........|+|||+.|+..+..   ..|.++++..+.
T Consensus       195 ~~i~~~~~~~~~~~-~~~---~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~  249 (269)
T d2hqsa1         195 QHIAKQDLATGGVQ-VLS---STFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF  249 (269)
T ss_dssp             EEEEEEETTTCCEE-ECC---CSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred             eeeeEeecccccce-Eee---cCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence             4555565555443 222   45566788999999998765542   346777776544

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.25  E-value=5.2e-09  Score=95.38  Aligned_cols=233  Identities=12%  Similarity=0.084  Sum_probs=152.4

Q ss_pred             CeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeE
Q psy15995        274 FVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSE  353 (683)
Q Consensus       274 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  353 (683)
                      .+..++++|||+++++...+++|+.|+... +......   ....+.+++|.+||+++++...++.+..++.........
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g-~~~~~~~---~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~  104 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT---VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE  104 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEE---CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCC-CEEEEEc---CCCCcceEEEcCCCCeEEEecCCceEEEEEeccccccee
Confidence            578899999999999999899999998554 3333222   556789999999999888888888888877654322111


Q ss_pred             EEecCcceeceEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCC
Q psy15995        354 FIMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT  433 (683)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~  433 (683)
                      ..                              .           ..........+++.++++++++.+.++.+..++...
T Consensus       105 ~~------------------------------~-----------~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~  143 (302)
T d2p4oa1         105 TL------------------------------L-----------TLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ  143 (302)
T ss_dssp             EE------------------------------E-----------ECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred             ec------------------------------c-----------ccCCccccceeEEccCCCEEeeccccccceeeeccC
Confidence            00                              0           011234567888999998888888888888888776


Q ss_pred             CCcceecc---------CCCCcceeEEEEeCCeE-EEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEe
Q psy15995        434 GENDRVQG---------AGHGNQINGMKATGELL-YTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTV  503 (683)
Q Consensus       434 ~~~~~~~~---------~~~~~~v~~~~~~~~~l-~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (683)
                      +.......         .........+.+.++.+ ++.+..+.|..++..........                      
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~----------------------  201 (302)
T d2p4oa1         144 PSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEP----------------------  201 (302)
T ss_dssp             TEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCC----------------------
T ss_pred             CcceeEecCCccceeeccCcccccccccccCCceeeecCCCCeEEecccccccccccc----------------------
Confidence            54322111         12223455667775554 44556778888877654321110                      


Q ss_pred             ceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEE---CCCCCEEE
Q psy15995        504 KQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSF---SPSNEYLV  580 (683)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~  580 (683)
                                  ........+..+++.++|+++++...++.|..++..................++++|   ++|++.|+
T Consensus       202 ------------~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~~~~~~pt~vafg~~~~D~~~Ly  269 (302)
T d2p4oa1         202 ------------EIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIY  269 (302)
T ss_dssp             ------------EEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEE
T ss_pred             ------------ccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEEEecCCCCCCceEEEEcCCCCCCCEEE
Confidence                        000112245679999999988888888999999876543221111123345889999   67888887


Q ss_pred             EEeCC
Q psy15995        581 ASDAH  585 (683)
Q Consensus       581 ~~~~d  585 (683)
                      .++..
T Consensus       270 vtt~~  274 (302)
T d2p4oa1         270 VVTNG  274 (302)
T ss_dssp             EEECT
T ss_pred             EECCC
Confidence            76543

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.24  E-value=3.7e-08  Score=88.31  Aligned_cols=245  Identities=11%  Similarity=0.077  Sum_probs=161.3

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccc----cCCCeeEEEEcCCCCeEEEEecCCceEEEEEEcc
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHP----IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE  217 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~  217 (683)
                      .....++++++|+.+++-...+.|++||.+ ++.+.......    .......+++.++....++........+..++ .
T Consensus        23 ~~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~-~  100 (279)
T d1q7fa_          23 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-Q  100 (279)
T ss_dssp             SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-T
T ss_pred             CCccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCcccccccc-c
Confidence            446789999999988887778899999975 44333221111    11234556766665555544443333333333 2


Q ss_pred             CCCceeeee-cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeec--cccccCeEEEEECCCCCEEEEEcCCC
Q psy15995        218 TGTSVGEIS-GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK--QEHSRFVQAVRYSPSGSHFASAGFDG  294 (683)
Q Consensus       218 ~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg  294 (683)
                      .+.....+. ........+++.+++.. +++....+.+.+++. .++.+..+  ..+......+++.++++.+++....+
T Consensus       101 ~g~~~~~~~~~~~~~p~~~avd~~G~i-~v~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~  178 (279)
T d1q7fa_         101 YGQFVRKFGATILQHPRGVTVDNKGRI-IVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAH  178 (279)
T ss_dssp             TSCEEEEECTTTCSCEEEEEECTTSCE-EEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGT
T ss_pred             cccceeecCCCcccccceeccccCCcE-EEEeeccceeeEecc-CCceeecccccccccccceeeeccceeEEeeecccc
Confidence            455555443 34556788999999984 666667788888884 45555543  34566788999999999888888889


Q ss_pred             cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC-CCcEEEEECCCCceeeEEEecCcceeceEEEEecCCE
Q psy15995        295 KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG-DKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDY  373 (683)
Q Consensus       295 ~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (683)
                      .|++||. +++.+..+..++.......+++.++|+.+++-.. ++.|.+++. +++.+..+...                
T Consensus       179 ~V~~~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~----------------  240 (279)
T d1q7fa_         179 CVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESK----------------  240 (279)
T ss_dssp             EEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEES----------------
T ss_pred             ceeeeec-CCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCC----------------
Confidence            9999995 5677777765556667889999999987766543 346888874 35554443211                


Q ss_pred             EEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCC
Q psy15995        374 LLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGE  435 (683)
Q Consensus       374 l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~  435 (683)
                                                ........+++.|+|.++ +++.++.|++|...+..
T Consensus       241 --------------------------~~~~~p~~vav~~dG~l~-V~~~n~~v~~fr~~~~~  275 (279)
T d1q7fa_         241 --------------------------VKHAQCFDVALMDDGSVV-LASKDYRLYIYRYVQLA  275 (279)
T ss_dssp             --------------------------SCCSCEEEEEEETTTEEE-EEETTTEEEEEECSCCC
T ss_pred             --------------------------CCCCCEeEEEEeCCCcEE-EEeCCCeEEEEEeeeec
Confidence                                      011235678888888644 45578889999877654

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.16  E-value=2e-08  Score=91.43  Aligned_cols=248  Identities=7%  Similarity=0.010  Sum_probs=156.1

Q ss_pred             eEEEEECCCCcEEEEecC-------CCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec
Q psy15995         88 VNVAKYSPSGFYIASGDI-------SGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD  160 (683)
Q Consensus        88 v~~~~~s~d~~~las~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  160 (683)
                      ...++|.|||+++++...       +|+|..||..++...........          ........++|.+++..|+++.
T Consensus        20 ~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~----------~~~g~P~Gl~~~~dg~~l~vad   89 (314)
T d1pjxa_          20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVN----------GYGGIPAGCQCDRDANQLFVAD   89 (314)
T ss_dssp             CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEET----------TEECCEEEEEECSSSSEEEEEE
T ss_pred             CeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccc----------cCCCcceeEEEeCCCCEEEEEE
Confidence            456789999998876432       46788899887753322111100          0012356799999998777777


Q ss_pred             CCccEEEEeccccceeeecc-cccc-CCCeeEEEEcCCCCeEEEEecCC-----------ceEEEEEEccCCCceeeeec
Q psy15995        161 ISGKVRIWDTVNKEHILKNE-FHPI-GGPIKDIAWSPDNQRMVVVGEGR-----------ERFGHVFMSETGTSVGEISG  227 (683)
Q Consensus       161 ~d~~i~iwd~~~~~~~~~~~-~~~~-~~~i~~~~~s~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~  227 (683)
                      ..+.|...+...+....... .... -.....+++.++|...++-....           .....+|.++.......+..
T Consensus        90 ~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg~~~~~~~  169 (314)
T d1pjxa_          90 MRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDT  169 (314)
T ss_dssp             TTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEE
T ss_pred             CCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecCceeEeeC
Confidence            77778888887654322111 1110 12357899999998766532211           11234555543222333333


Q ss_pred             CCcCeEEEEeecCCC----eEEEEeeCCCeEEEEcCCCCceee------eccc-cccCeEEEEECCCCCEEEEEcCCCcE
Q psy15995        228 QSKPINSCDFKPSRP----FRIITGSEDNTIAVFEGPPFKFKM------TKQE-HSRFVQAVRYSPSGSHFASAGFDGKV  296 (683)
Q Consensus       228 ~~~~v~~~~~~~~~~----~~l~~~~~d~~i~iw~~~~~~~~~------~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i  296 (683)
                      .-...+.++|+|++.    .++++-+..+.|..|++.....+.      .+.. +......+++..+|+..++....+.|
T Consensus       170 ~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I  249 (314)
T d1pjxa_         170 AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI  249 (314)
T ss_dssp             EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred             CcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEE
Confidence            344557889998764    345666778889988865332221      1111 22345689999999987777778899


Q ss_pred             EEEeCCCCeeEEeccCCccccCeEEEEEccCCCEE-EEEECCCcEEEEECCC
Q psy15995        297 FLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQL-LTASGDKTCKLWDIET  347 (683)
Q Consensus       297 ~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~  347 (683)
                      .+||.+.++....+..  ......+++|.||++.| ++.+.+|.|...++..
T Consensus       250 ~~~dp~~g~~~~~i~~--p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         250 EVFGPDGGQPKMRIRC--PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             EEECTTCBSCSEEEEC--SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             EEEeCCCCEEEEEEEC--CCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence            9999888877666654  44678899999998755 5555667777777653

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.16  E-value=2e-08  Score=90.15  Aligned_cols=238  Identities=12%  Similarity=0.139  Sum_probs=153.4

Q ss_pred             cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCC-----CCcceeEEEEe---CCeEEEE-EcCCeEEEEeCCC
Q psy15995        404 PITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAG-----HGNQINGMKAT---GELLYTC-GIDDTIKQVDLSS  474 (683)
Q Consensus       404 ~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~-----~~~~v~~~~~~---~~~l~~~-~~d~~i~~~~~~~  474 (683)
                      ....++++++++.+++-..+..|++||.. ++........     ....-..+...   +..+++. +.++.|..++...
T Consensus        24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g  102 (279)
T d1q7fa_          24 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG  102 (279)
T ss_dssp             CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS
T ss_pred             CccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccccc
Confidence            46789999999988887778899999965 4443333211     11112223332   3333333 2344565555432


Q ss_pred             CcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeee--cCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy15995        475 NAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSL--PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNN  552 (683)
Q Consensus       475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~  552 (683)
                      .                                      .....  .....+..+++.++++++++....+.+.+++...
T Consensus       103 ~--------------------------------------~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g  144 (279)
T d1q7fa_         103 Q--------------------------------------FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG  144 (279)
T ss_dssp             C--------------------------------------EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred             c--------------------------------------ceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCC
Confidence            2                                      11111  1223567889999999888888888888888654


Q ss_pred             CccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeec-CCc
Q psy15995        553 KSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSL-DTT  631 (683)
Q Consensus       553 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~-d~~  631 (683)
                      ......-...+......+++.+++..+++....+.|++|+.... .+...-..++......|++.|+|+++++-.. ++.
T Consensus       145 ~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~-~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~  223 (279)
T d1q7fa_         145 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ-YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN  223 (279)
T ss_dssp             CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC-EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE
T ss_pred             ceeecccccccccccceeeeccceeEEeeeccccceeeeecCCc-eeeeecccccccCCcccccccCCeEEEEECCCCcE
Confidence            33221111235567888999999999998888999999997543 3322211113445788999999998777543 457


Q ss_pred             EEEEeCCCCceeeEeecCCCCCCeeEEEEccCCeEEEeeCCCcEEEEeecc
Q psy15995        632 IIIWSLASPAKHIIIKNAHPQSQITRLQWLDNDLLVSVGQDCNTKIWEIAP  682 (683)
Q Consensus       632 v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~v~vw~~~~  682 (683)
                      |.+|+ .+++.+..+...........|++.++..|++++.+.+|++|+...
T Consensus       224 v~~f~-~~G~~~~~~~~~~~~~~p~~vav~~dG~l~V~~~n~~v~~fr~~~  273 (279)
T d1q7fa_         224 LTIFT-QDGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ  273 (279)
T ss_dssp             EEEEC-TTSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred             EEEEC-CCCCEEEEEeCCCCCCCEeEEEEeCCCcEEEEeCCCeEEEEEeee
Confidence            99998 457766555432234567899988555677777899999999764

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.14  E-value=3.3e-09  Score=96.14  Aligned_cols=238  Identities=11%  Similarity=0.050  Sum_probs=135.4

Q ss_pred             eeCCC--CCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecC-C-----CCEEEEeCCCcccccc
Q psy15995         51 GGDPK--GKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDI-S-----GKVRIWDTVNKEHILK  122 (683)
Q Consensus        51 ~~s~~--~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~-d-----g~i~iwd~~~~~~~~~  122 (683)
                      ..|||  |+.+|+..++.|.+.|+++++.. .|..+.+.+...+|||||++||.... +     ..|.+.+..+++...-
T Consensus         5 ~~sPdi~G~~v~f~~~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~l   83 (281)
T d1k32a2           5 LLNPDIHGDRIIFVCCDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI   83 (281)
T ss_dssp             CEEEEEETTEEEEEETTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEEC
T ss_pred             ccCCCCCCCEEEEEeCCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEe
Confidence            36899  99999999999999999998875 46778888999999999999986432 2     2377778777754322


Q ss_pred             cccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC------ccEEEEeccccceeeeccccccCCCeeEEEEcCC
Q psy15995        123 NEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS------GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPD  196 (683)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~  196 (683)
                      .....        .............|+|||+.|+.....      ..+...+...+.....     ..+.... .+.++
T Consensus        84 t~~~~--------~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~  149 (281)
T d1k32a2          84 TYFSG--------KSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL-----NLGPATH-ILFAD  149 (281)
T ss_dssp             CCCCE--------EEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC-----CSCSCSE-EEEET
T ss_pred             eecCC--------CccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEe-----cCCccce-eeecC
Confidence            11110        000111345677899999988875332      2345555554432211     1122233 34444


Q ss_pred             CCeEEEEecCCc----------eEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeC--CCeEEEEcCCCCce
Q psy15995        197 NQRMVVVGEGRE----------RFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSE--DNTIAVFEGPPFKF  264 (683)
Q Consensus       197 ~~~l~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~  264 (683)
                      +...+.......          ........ ...................+.++.  .+.....  ...|.++|+.+.+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~d~~g~~~  226 (281)
T d1k32a2         150 GRRVIGRNTFELPHWKGYRGGTRGKIWIEV-NSGAFKKIVDMSTHVSSPVIVGHR--IYFITDIDGFGQIYSTDLDGKDL  226 (281)
T ss_dssp             TEEEEEESCSCCTTSTTCCSTTCCEEEEEE-ETTEEEEEECCSSCCEEEEEETTE--EEEEECTTSSCEEEEEETTSCSC
T ss_pred             CCeEEEeeccccceeeeeccCCcceeeeec-cccceeeccCCccccceeeeeccc--cceecccccccceEEEeCCCCce
Confidence            444433322111          00111111 111222223333444455555553  2333333  34567778776655


Q ss_pred             eeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEe
Q psy15995        265 KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSE  309 (683)
Q Consensus       265 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~  309 (683)
                      ..........+  ..|+|||+.|+... ++.|+++|+.+++....
T Consensus       227 ~~lt~~~~~~~--~~~SpDG~~I~f~~-~~~l~~~d~~~g~~~~i  268 (281)
T d1k32a2         227 RKHTSFTDYYP--RHLNTDGRRILFSK-GGSIYIFNPDTEKIEKI  268 (281)
T ss_dssp             EECCCCCSSCE--EEEEESSSCEEEEE-TTEEEEECTTTCCEEEC
T ss_pred             EEeecCCCccc--ccCcCCCCEEEEEe-CCEEEEEECCCCCEEEe
Confidence            44322222233  46899999877644 68899999988876543

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.13  E-value=5.5e-08  Score=88.96  Aligned_cols=236  Identities=12%  Similarity=0.033  Sum_probs=152.5

Q ss_pred             ceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC----C
Q psy15995         87 AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI----S  162 (683)
Q Consensus        87 ~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----d  162 (683)
                      .+..++|.++|++.++-...++|..|+..+++.........              .....+++.+||+++++...    .
T Consensus        41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~--------------~~p~gla~~~dG~l~va~~~~~~~~  106 (319)
T d2dg1a1          41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK--------------ANPAAIKIHKDGRLFVCYLGDFKST  106 (319)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSS--------------SSEEEEEECTTSCEEEEECTTSSSC
T ss_pred             CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCC--------------CCeeEEEECCCCCEEEEecCCCccc
Confidence            44688999999977777788889999887764333221111              34678999999988776543    2


Q ss_pred             ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecC--CceEEEEEEcc-CCCceeeeecCCcCeEEEEeec
Q psy15995        163 GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEG--RERFGHVFMSE-TGTSVGEISGQSKPINSCDFKP  239 (683)
Q Consensus       163 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~  239 (683)
                      +.+...+...+.................+++.++|++.+.-...  ......++..+ .+..+..+...-...+.++|+|
T Consensus       107 ~~i~~~~~~~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~  186 (319)
T d2dg1a1         107 GGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALST  186 (319)
T ss_dssp             CEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECT
T ss_pred             eeEEEEcCCCceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeecc
Confidence            33555555544332222222223457889999999865543221  11123455444 3444444444445568899999


Q ss_pred             CCCeEEEEeeCCCeEEEEcCCCC-ceeee-------ccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEecc
Q psy15995        240 SRPFRIITGSEDNTIAVFEGPPF-KFKMT-------KQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG  311 (683)
Q Consensus       240 ~~~~~l~~~~~d~~i~iw~~~~~-~~~~~-------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  311 (683)
                      +++.+.++-+..+.|..|++... .....       ..........+++.++|++.++....+.|.++| ..++.+..+.
T Consensus       187 dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~-p~G~~l~~i~  265 (319)
T d2dg1a1         187 DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFN-KRGYPIGQIL  265 (319)
T ss_dssp             TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEEC-TTSCEEEEEE
T ss_pred             ccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEEC-CCCcEEEEEe
Confidence            99876677788899999986532 11111       111122356799999999878777789999999 4788888876


Q ss_pred             CCc----cccCeEEEEEccCCCEEEEEECC
Q psy15995        312 NPA----HKGGVYAVAWKPDGTQLLTASGD  337 (683)
Q Consensus       312 ~~~----~~~~i~~~~~~~~~~~l~~~~~d  337 (683)
                      .|.    +...+.+++|.++...+++...+
T Consensus       266 ~P~~~~~~~~~~~~~~~~~~~~~~~~t~~~  295 (319)
T d2dg1a1         266 IPGRDEGHMLRSTHPQFIPGTNQLIICSND  295 (319)
T ss_dssp             CTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             CCCcCCCcCceeeeEEEeCCCCEEEEEcCC
Confidence            653    23467899999988777776543

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.07  E-value=1.2e-07  Score=86.30  Aligned_cols=239  Identities=11%  Similarity=0.075  Sum_probs=149.3

Q ss_pred             EEEeeCCCCCeEEEec--------CCeEEEEeCCCCcccccccCc----ccceEEEEECCCCcEEEEecCCCCEEEEeCC
Q psy15995         48 IVLGGDPKGKNFLYTN--------GNSVIIRNIENPAISDIYTEH----SCAVNVAKYSPSGFYIASGDISGKVRIWDTV  115 (683)
Q Consensus        48 ~~~~~s~~~~~l~~~~--------~~~i~v~~~~~~~~~~~~~~h----~~~v~~~~~s~d~~~las~~~dg~i~iwd~~  115 (683)
                      -.++++|||+++++..        ++.|..||.++++........    ...-..++|.++|+.|++++..+.|...+..
T Consensus        21 EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~~~  100 (314)
T d1pjxa_          21 EGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD  100 (314)
T ss_dssp             EEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT
T ss_pred             eEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEeCC
Confidence            3467899999888653        357999999888654433221    2235789999999888887766778888877


Q ss_pred             CcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC---------------CccEEEEeccccceeeecc
Q psy15995        116 NKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI---------------SGKVRIWDTVNKEHILKNE  180 (683)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------------d~~i~iwd~~~~~~~~~~~  180 (683)
                      ...... ......+.+         ....+.+++.++|.+.++-..               .|.|..++... +....  
T Consensus       101 g~~~~~-~~~~~~g~~---------~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg-~~~~~--  167 (314)
T d1pjxa_         101 GTFEEI-AKKDSEGRR---------MQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG-QMIQV--  167 (314)
T ss_dssp             SCEEEC-CSBCTTSCB---------CBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS-CEEEE--
T ss_pred             CcEEEE-Eeccccccc---------cCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecC-ceeEe--
Confidence            653221 111111110         134577899999987776321               23444444432 21111  


Q ss_pred             ccccCCCeeEEEEcCCCC----eEEEEecCCceEEEEEEccCCCcee------eeec-CCcCeEEEEeecCCCeEEEEee
Q psy15995        181 FHPIGGPIKDIAWSPDNQ----RMVVVGEGRERFGHVFMSETGTSVG------EISG-QSKPINSCDFKPSRPFRIITGS  249 (683)
Q Consensus       181 ~~~~~~~i~~~~~s~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~v~~~~~~~~~~~~l~~~~  249 (683)
                       ...-...+.++|+|++.    .|+++...... +..++.+....+.      .+.+ +......+++..+|+. .++..
T Consensus       168 -~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~-i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~Gnl-yVa~~  244 (314)
T d1pjxa_         168 -DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKK-LWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNL-LVANW  244 (314)
T ss_dssp             -EEEESSEEEEEEEECTTSCEEEEEEEETTTTE-EEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCE-EEEEE
T ss_pred             -eCCcceeeeeEECCCCCcceeEEEEEeecccc-eEEeeccCccccceeeEEEEccccccccceeeEEecCCcE-EEEEc
Confidence             11113346799998865    56665544433 3344443222211      2222 2234567999999984 66666


Q ss_pred             CCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCE-EEEEcCCCcEEEEeCC
Q psy15995        250 EDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSH-FASAGFDGKVFLYDGA  302 (683)
Q Consensus       250 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iw~~~  302 (683)
                      ..+.|.+||.+.++....+.......++++|.|+++. +++.+.+|.|...++.
T Consensus       245 ~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         245 GSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             TTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             CCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence            7899999998877776666666677899999999974 4566677888888864

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.96  E-value=1.2e-06  Score=79.81  Aligned_cols=245  Identities=12%  Similarity=0.107  Sum_probs=146.2

Q ss_pred             cCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC----CCcEEEEeCCCCe
Q psy15995        230 KPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF----DGKVFLYDGASAD  305 (683)
Q Consensus       230 ~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iw~~~~~~  305 (683)
                      ..+..++|.++++ +.++-..++.|..|+....+..............++++++|+++++...    .+.+...+...+.
T Consensus        40 ~~lEG~~~D~~G~-Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~  118 (319)
T d2dg1a1          40 LQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN  118 (319)
T ss_dssp             CCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred             cCcEeCEECCCCC-EEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCce
Confidence            3456789999997 4777778899999998777666655556667899999999997776543    3446666666555


Q ss_pred             eEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecCCcEEE
Q psy15995        306 LVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLSGFISY  385 (683)
Q Consensus       306 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~  385 (683)
                      ................+++.++|++.++.......        ..                             .+.+..
T Consensus       119 ~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~--------~~-----------------------------~g~v~~  161 (319)
T d2dg1a1         119 LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYST--------NP-----------------------------LGGVYY  161 (319)
T ss_dssp             CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTT--------BC-----------------------------CEEEEE
T ss_pred             eeeeccCCCcccCCcceeEEeccceeecccccccc--------cC-----------------------------cceeEE
Confidence            54444322234457788999999855543211100        00                             000111


Q ss_pred             EecCCCCcceeeeeeccccEEEEEEeCCCCEEEEE-eCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcC
Q psy15995        386 LDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTG-SHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGID  464 (683)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d  464 (683)
                      ++..  ...+..+...-...+.++|+|+++.|+.+ +..+.|..|++...........                      
T Consensus       162 ~~~d--g~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~----------------------  217 (319)
T d2dg1a1         162 VSPD--FRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFG----------------------  217 (319)
T ss_dssp             ECTT--SCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEE----------------------
T ss_pred             Eecc--cceeEEEeeccceeeeeeeccccceEEEecccCCceEEEEEcCCCceecccc----------------------
Confidence            1111  11111112222345789999999876544 5577888888654321111000                      


Q ss_pred             CeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCceeeeecCCCCCcEEEEccCCCEEEEEcCCCc
Q psy15995        465 DTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSK  544 (683)
Q Consensus       465 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~  544 (683)
                       .                                              ...........+..+++.++|++.++....+.
T Consensus       218 -~----------------------------------------------~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~  250 (319)
T d2dg1a1         218 -A----------------------------------------------TIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGR  250 (319)
T ss_dssp             -E----------------------------------------------EEEEECCSSSEEEEEEEBTTCCEEEEEETTTE
T ss_pred             -c----------------------------------------------eeeeccCCccceeeeeEcCCCCEEEEEcCCCE
Confidence             0                                              00000001112467899999998888888999


Q ss_pred             EEEEEcCCCccCcceeec-----CCcCeeEEEECCCCCEEEEEeC
Q psy15995        545 VHIYELNNKSLSPKAELD-----HLGPVTDCSFSPSNEYLVASDA  584 (683)
Q Consensus       545 i~i~d~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~  584 (683)
                      |.+|+. .++.+.+..++     +...+++++|.+++..+++...
T Consensus       251 V~~~~p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         251 VLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN  294 (319)
T ss_dssp             EEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred             EEEECC-CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence            999996 45555444432     3446889999998877766543

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.72  E-value=1.3e-05  Score=71.75  Aligned_cols=224  Identities=13%  Similarity=0.099  Sum_probs=147.3

Q ss_pred             EEEECC-CCcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEE
Q psy15995         90 VAKYSP-SGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIW  168 (683)
Q Consensus        90 ~~~~s~-d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw  168 (683)
                      ...|.+ ++++..+=-..++|.-||..+++.. .+...               ..+.++++.++|.++++. . ..+.++
T Consensus        22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~~~---------------~~~~~i~~~~dg~l~va~-~-~gl~~~   83 (295)
T d2ghsa1          22 GPTFDPASGTAWWFNILERELHELHLASGRKT-VHALP---------------FMGSALAKISDSKQLIAS-D-DGLFLR   83 (295)
T ss_dssp             EEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECS---------------SCEEEEEEEETTEEEEEE-T-TEEEEE
T ss_pred             CCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEECC---------------CCcEEEEEecCCCEEEEE-e-CccEEe
Confidence            445766 4444444446678888888877432 11111               456788899999887764 3 358899


Q ss_pred             eccccceeeeccccc--cCCCeeEEEEcCCCCeEEEEecCC--ceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeE
Q psy15995        169 DTVNKEHILKNEFHP--IGGPIKDIAWSPDNQRMVVVGEGR--ERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFR  244 (683)
Q Consensus       169 d~~~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  244 (683)
                      |..+++.........  ....+..+.+.|+|+..+......  .....++....++..... ..-...+.++|+++++.+
T Consensus        84 d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~-~~~~~~Ng~~~s~d~~~l  162 (295)
T d2ghsa1          84 DTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLF-ADISIPNSICFSPDGTTG  162 (295)
T ss_dssp             ETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEE-EEESSEEEEEECTTSCEE
T ss_pred             ecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEe-eccCCcceeeecCCCceE
Confidence            999886433222221  223678999999998766654321  112456666666543333 334456789999999977


Q ss_pred             EEEeeCCCeEEEEcCCCCc--------eeeeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccc
Q psy15995        245 IITGSEDNTIAVFEGPPFK--------FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHK  316 (683)
Q Consensus       245 l~~~~~d~~i~iw~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~  316 (683)
                      +++-+..+.|..++.....        ......+.......+++..+|++.++.-..+.|..|| .+++.+..+..|  .
T Consensus       163 ~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~d-p~G~~~~~i~lP--~  239 (295)
T d2ghsa1         163 YFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD-TDGNHIARYEVP--G  239 (295)
T ss_dssp             EEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC-TTCCEEEEEECS--C
T ss_pred             EEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEec-CCCcEeeEecCC--C
Confidence            7888888999998754221        1112233455678899999999777666678899999 578888888763  3


Q ss_pred             cCeEEEEEc-cCCCEEEEEE
Q psy15995        317 GGVYAVAWK-PDGTQLLTAS  335 (683)
Q Consensus       317 ~~i~~~~~~-~~~~~l~~~~  335 (683)
                      ..+++++|- +|.+.|++.+
T Consensus       240 ~~~T~~~FGG~d~~~LyvTt  259 (295)
T d2ghsa1         240 KQTTCPAFIGPDASRLLVTS  259 (295)
T ss_dssp             SBEEEEEEESTTSCEEEEEE
T ss_pred             CceEEEEEeCCCCCEEEEEE
Confidence            568999996 5766665543

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.66  E-value=3.3e-07  Score=82.50  Aligned_cols=233  Identities=13%  Similarity=0.007  Sum_probs=124.8

Q ss_pred             EECCC--CcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecC----C--c
Q psy15995         92 KYSPS--GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI----S--G  163 (683)
Q Consensus        92 ~~s~d--~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----d--~  163 (683)
                      ..|||  |+++|..+ +|.|.+.|+.+++.. .+..++              ......+|||||++||....    +  .
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~-~Lt~~~--------------~~~~~p~~SPDG~~iaf~~~~~~~~~~~   68 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTR-KIVSNL--------------GVINNARFFPDGRKIAIRVMRGSSLNTA   68 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEE-EEECSS--------------SEEEEEEECTTSSEEEEEEEESTTCCEE
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEE-EEecCC--------------CcccCEEECCCCCEEEEEEeeCCCCCce
Confidence            46799  99998765 456888899887643 232222              45677899999999986532    1  2


Q ss_pred             cEEEEeccccceeeecccc----ccCCCeeEEEEcCCCCeEEEEecCCc----eEEEEEEccCCCceeeeecCCcCeEEE
Q psy15995        164 KVRIWDTVNKEHILKNEFH----PIGGPIKDIAWSPDNQRMVVVGEGRE----RFGHVFMSETGTSVGEISGQSKPINSC  235 (683)
Q Consensus       164 ~i~iwd~~~~~~~~~~~~~----~~~~~i~~~~~s~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~  235 (683)
                      .|.+++..+++........    .........+|+|||+.++.......    ........+.+....   .+.......
T Consensus        69 ~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  145 (281)
T d1k32a2          69 DLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVP---LNLGPATHI  145 (281)
T ss_dssp             EEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEE---CCSCSCSEE
T ss_pred             EEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEE---ecCCcccee
Confidence            4777788777644322111    11134567899999999988654321    112333333332221   122222233


Q ss_pred             EeecCCCeEEEEeeCCC-----------eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC--CCcEEEEeCC
Q psy15995        236 DFKPSRPFRIITGSEDN-----------TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF--DGKVFLYDGA  302 (683)
Q Consensus       236 ~~~~~~~~~l~~~~~d~-----------~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iw~~~  302 (683)
                       +.+++...+.....+.           .............. ............++++. .+.....  ...|.++|+.
T Consensus       146 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~~  222 (281)
T d1k32a2         146 -LFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKK-IVDMSTHVSSPVIVGHR-IYFITDIDGFGQIYSTDLD  222 (281)
T ss_dssp             -EEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEE-EECCSSCCEEEEEETTE-EEEEECTTSSCEEEEEETT
T ss_pred             -eecCCCeEEEeeccccceeeeeccCCcceeeeeccccceee-ccCCccccceeeeeccc-cceecccccccceEEEeCC
Confidence             3344433233332221           11111111111111 11223334445555543 2333333  3357888887


Q ss_pred             CCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCcee
Q psy15995        303 SADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVV  351 (683)
Q Consensus       303 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  351 (683)
                      +++.......  ....  ...|+|||+.|+.. .++.|.++|+.+++..
T Consensus       223 g~~~~~lt~~--~~~~--~~~~SpDG~~I~f~-~~~~l~~~d~~~g~~~  266 (281)
T d1k32a2         223 GKDLRKHTSF--TDYY--PRHLNTDGRRILFS-KGGSIYIFNPDTEKIE  266 (281)
T ss_dssp             SCSCEECCCC--CSSC--EEEEEESSSCEEEE-ETTEEEEECTTTCCEE
T ss_pred             CCceEEeecC--CCcc--cccCcCCCCEEEEE-eCCEEEEEECCCCCEE
Confidence            7765543321  2223  34689999998774 4678999999888754

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.65  E-value=1.2e-05  Score=71.77  Aligned_cols=221  Identities=9%  Similarity=-0.009  Sum_probs=144.5

Q ss_pred             EeeCCCCCeEEEe--cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCccccccccccc
Q psy15995         50 LGGDPKGKNFLYT--NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHP  127 (683)
Q Consensus        50 ~~~s~~~~~l~~~--~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~  127 (683)
                      ..|++....|.+.  .++.|.-||.++++.. .+. ....+.++++.++|++++++ .+ .|.++|..+++...-.....
T Consensus        23 p~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~dg~l~va~-~~-gl~~~d~~tg~~~~l~~~~~   98 (295)
T d2ghsa1          23 PTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELES   98 (295)
T ss_dssp             EEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSST
T ss_pred             CeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEE-CCCCcEEEEEecCCCEEEEE-eC-ccEEeecccceeeEEeeeec
Confidence            3478766666666  4789999999988754 232 34578899999999888764 44 59999999886432221111


Q ss_pred             CCCCcccceeeeeecceeeeEeeccceEEEeecC----CccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEE
Q psy15995        128 IGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDI----SGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVV  203 (683)
Q Consensus       128 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  203 (683)
                       ..         ....++.+.+.|+|++.++...    .+.-.+|.+..++.....  . .-.....++|+++++.++.+
T Consensus        99 -~~---------~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~--~-~~~~~Ng~~~s~d~~~l~~~  165 (295)
T d2ghsa1          99 -DL---------PGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLF--A-DISIPNSICFSPDGTTGYFV  165 (295)
T ss_dssp             -TC---------TTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEE--E-EESSEEEEEECTTSCEEEEE
T ss_pred             -CC---------CcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEe--e-ccCCcceeeecCCCceEEEe
Confidence             00         1145778889999987665432    234566766666432221  1 12456789999999998887


Q ss_pred             ecCCceEEEEEEccC--CC----c--eeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCe
Q psy15995        204 GEGRERFGHVFMSET--GT----S--VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFV  275 (683)
Q Consensus       204 ~~~~~~~~~~~~~~~--~~----~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v  275 (683)
                      ...... +..++.+.  +.    .  .....+..+....+++..+|.. .++.-..+.|..|| ..++.+..+.-....+
T Consensus       166 dt~~~~-I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~Gnl-Wva~~~~g~V~~~d-p~G~~~~~i~lP~~~~  242 (295)
T d2ghsa1         166 DTKVNR-LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI-WNARWGEGAVDRYD-TDGNHIARYEVPGKQT  242 (295)
T ss_dssp             ETTTCE-EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE-EEEEETTTEEEEEC-TTCCEEEEEECSCSBE
T ss_pred             ecccce-eeEeeecccccccccceEEEeccCcccccccceEEcCCCCE-EeeeeCCCceEEec-CCCcEeeEecCCCCce
Confidence            765543 44455442  11    1  1122334556788999999974 55555678899999 5788888877666779


Q ss_pred             EEEEEC-CCCCEEEEE
Q psy15995        276 QAVRYS-PSGSHFASA  290 (683)
Q Consensus       276 ~~~~~~-~~~~~l~~~  290 (683)
                      ++++|- ++.+.|++.
T Consensus       243 T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         243 TCPAFIGPDASRLLVT  258 (295)
T ss_dssp             EEEEEESTTSCEEEEE
T ss_pred             EEEEEeCCCCCEEEEE
Confidence            999995 676655543

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=98.43  E-value=2.6e-05  Score=76.72  Aligned_cols=267  Identities=11%  Similarity=0.020  Sum_probs=158.6

Q ss_pred             cEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec-----CCccEEEEeccc
Q psy15995         98 FYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD-----ISGKVRIWDTVN  172 (683)
Q Consensus        98 ~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----~d~~i~iwd~~~  172 (683)
                      ..|+.++.||.+.--|.++++.+.+.........          ..++.--.-.++..++..+     .+|.|+-+|+.+
T Consensus       116 ~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~----------~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~T  185 (571)
T d2ad6a1         116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPKVG----------STLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKT  185 (571)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECCCGGGT----------CBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTT
T ss_pred             CeEEEEeCCCcEEeeehhhhhhhccccccccccc----------cceeecCeEeCCeEEEeeccccccccCcEEEEECCC
Confidence            3566778889888889999987765543210000          1111111122233333222     367899999999


Q ss_pred             cceeeecccccc-----------------------------------CCCe-eEEEEcCCCCeEEEEecCC---------
Q psy15995        173 KEHILKNEFHPI-----------------------------------GGPI-KDIAWSPDNQRMVVVGEGR---------  207 (683)
Q Consensus       173 ~~~~~~~~~~~~-----------------------------------~~~i-~~~~~s~~~~~l~~~~~~~---------  207 (683)
                      |+.+......+.                                   .+.+ ...++.++...++......         
T Consensus       186 G~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~  265 (571)
T d2ad6a1         186 GELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRP  265 (571)
T ss_dssp             CCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSC
T ss_pred             CcEEEEEeccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccc
Confidence            998875432210                                   1112 3356667666666554422         


Q ss_pred             -----ceEEEEEEccCCCceeeeecCCcCeE---------EEEeecCCC--eEEEEeeCCCeEEEEcCCCCceeeecccc
Q psy15995        208 -----ERFGHVFMSETGTSVGEISGQSKPIN---------SCDFKPSRP--FRIITGSEDNTIAVFEGPPFKFKMTKQEH  271 (683)
Q Consensus       208 -----~~~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~~~~~--~~l~~~~~d~~i~iw~~~~~~~~~~~~~~  271 (683)
                           ...+...+.++|+.+..++.+...+.         ......+++  ..++..+.+|.+.++|..+++.+...+..
T Consensus       266 g~n~~s~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~  345 (571)
T d2ad6a1         266 GDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVD  345 (571)
T ss_dssp             SCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred             cccccccceeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccC
Confidence                 12355667788888777664332221         222223332  24678889999999999988876422110


Q ss_pred             -------------------------------------ccCe--EEEEECCCCCEEEEEcCC-------------------
Q psy15995        272 -------------------------------------SRFV--QAVRYSPSGSHFASAGFD-------------------  293 (683)
Q Consensus       272 -------------------------------------~~~v--~~~~~~~~~~~l~~~~~d-------------------  293 (683)
                                                           .+..  ...+++|+...++....+                   
T Consensus       346 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~  425 (571)
T d2ad6a1         346 PAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFV  425 (571)
T ss_dssp             TTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCC
T ss_pred             CcccccccccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCcccc
Confidence                                                 0000  125667776666543322                   


Q ss_pred             ------------------CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEE
Q psy15995        294 ------------------GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       294 ------------------g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  355 (683)
                                        |.|.-+|+.+++.+.+....   .+..+-...-.+.++++++.||.++.+|.++++.+.++.
T Consensus       426 ~~~~~~~~~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~---~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~  502 (571)
T d2ad6a1         426 GATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK---FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK  502 (571)
T ss_dssp             CEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES---SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             ccceeeccccCCcccCCcccEEEeccCCCceeeEcCCC---CCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence                              46777888888877665421   111111122246678889999999999999999999999


Q ss_pred             ecCcceeceEEEEecCC-EEEEE
Q psy15995        356 MGNQVEDQQVSCLWQGD-YLLTV  377 (683)
Q Consensus       356 ~~~~~~~~~~~~~~~~~-~l~~~  377 (683)
                      .........+.+..+++ ++++.
T Consensus       503 l~~~~~a~P~ty~~dGkqYi~v~  525 (571)
T d2ad6a1         503 MPSGGIGSPMTYSFKGKQYIGSM  525 (571)
T ss_dssp             CSSCCCSCCEEEEETTEEEEEEE
T ss_pred             CCCCceecceEEEECCEEEEEEE
Confidence            98888877787777776 44443

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=98.39  E-value=7.5e-05  Score=73.26  Aligned_cols=309  Identities=12%  Similarity=0.091  Sum_probs=180.1

Q ss_pred             CCCeEEEecCCeEEEEeCCCCcccccccCcc----------cce-EEEEECCCCcEEEEecCCCCEEEEeCCCccccccc
Q psy15995         55 KGKNFLYTNGNSVIIRNIENPAISDIYTEHS----------CAV-NVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKN  123 (683)
Q Consensus        55 ~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~----------~~v-~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~  123 (683)
                      +|..++...++.|+=.|.++|+.+-.+..+.          ..+ ..++.  .+..++.+..|+.|.-.|..+++.+.+.
T Consensus        66 ~g~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~g~l~Alda~tG~~~w~~  143 (560)
T d1kv9a2          66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ  143 (560)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCcce--eCCeEEEEeCCCEEEEEECCCCcEEecc
Confidence            4555555667778888888887765432110          000 01111  2346777788888998999999887766


Q ss_pred             ccccCCCCcccceeeeeecceeeeEeeccceEEEe-----ecCCccEEEEeccccceeeeccccccC-------------
Q psy15995        124 EFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIAS-----GDISGKVRIWDTVNKEHILKNEFHPIG-------------  185 (683)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-----~~~d~~i~iwd~~~~~~~~~~~~~~~~-------------  185 (683)
                      .........          .+...-.--++..++-     ....|.|.-+|.++|+.+.+.......             
T Consensus       144 ~~~~~~~~~----------~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~  213 (560)
T d1kv9a2         144 QTTDPAKPY----------SITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREA  213 (560)
T ss_dssp             ECSCTTSSC----------BCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHH
T ss_pred             CccCcccce----------eeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeeeeccccccCCccccccccc
Confidence            543211110          0000011112222221     122467999999999988766532110             


Q ss_pred             ---------------C-CeeEEEEcCCCCeEEEEecCC-----------------ceEEEEEEccCCCceeeeecCCcCe
Q psy15995        186 ---------------G-PIKDIAWSPDNQRMVVVGEGR-----------------ERFGHVFMSETGTSVGEISGQSKPI  232 (683)
Q Consensus       186 ---------------~-~i~~~~~s~~~~~l~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~v  232 (683)
                                     + .-..+++.++..+++....+.                 ...+.-.+.++++....++.....+
T Consensus       214 ~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld~~tG~~~W~~Q~~~~D~  293 (560)
T d1kv9a2         214 AKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDS  293 (560)
T ss_dssp             HTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC
T ss_pred             cccccccccccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEecCCccceeEEEecccccc
Confidence                           1 122356677777666644321                 1124455666777766655433222


Q ss_pred             E---------EEEeecCC--CeEEEEeeCCCeEEEEcCCCCceeeeccccc------------------------cC---
Q psy15995        233 N---------SCDFKPSR--PFRIITGSEDNTIAVFEGPPFKFKMTKQEHS------------------------RF---  274 (683)
Q Consensus       233 ~---------~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~------------------------~~---  274 (683)
                      .         -.....++  ...++.+..+|.+.++|..+++.+.....-.                        ..   
T Consensus       294 wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~  373 (560)
T d1kv9a2         294 WDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVM  373 (560)
T ss_dssp             SCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEE
T ss_pred             ccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccccChhhccccccccccccccceee
Confidence            1         12222233  2357778999999999999988765332100                        00   


Q ss_pred             ---------eEEEEECCCCCEEEEEcC------------------------------------CCcEEEEeCCCCeeEEe
Q psy15995        275 ---------VQAVRYSPSGSHFASAGF------------------------------------DGKVFLYDGASADLVSE  309 (683)
Q Consensus       275 ---------v~~~~~~~~~~~l~~~~~------------------------------------dg~i~iw~~~~~~~~~~  309 (683)
                               -...+++|+...++....                                    .|.+.-+|+.+++.+..
T Consensus       374 ~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~G~l~A~D~~tGk~~W~  453 (560)
T d1kv9a2         374 WPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWK  453 (560)
T ss_dssp             SSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEE
T ss_pred             eeccccccccccccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCCcccccceEEEeCCCCeEeee
Confidence                     013456677666654332                                    25688899999988877


Q ss_pred             ccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCC-EEEEEe
Q psy15995        310 LGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD-YLLTVS  378 (683)
Q Consensus       310 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~  378 (683)
                      .....   +..+-.+.-.+.++++++.||.++.+|.++++.+.++..........+.+..+++ ++++..
T Consensus       454 ~~~~~---~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv~v~a  520 (560)
T d1kv9a2         454 VPYPT---HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA  520 (560)
T ss_dssp             EEESS---SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred             ccCCC---CCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEEEe
Confidence            65322   2222122334678888999999999999999999999988877777777777775 444433

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=0.00061  Score=59.01  Aligned_cols=252  Identities=8%  Similarity=-0.030  Sum_probs=154.0

Q ss_pred             CCeEEEecCCeEEEEeCCCCcccc-----cccCcccceEEEEECCCCcEEEEe-cCCCCEEEEeCCCcccccccccccCC
Q psy15995         56 GKNFLYTNGNSVIIRNIENPAISD-----IYTEHSCAVNVAKYSPSGFYIASG-DISGKVRIWDTVNKEHILKNEFHPIG  129 (683)
Q Consensus        56 ~~~l~~~~~~~i~v~~~~~~~~~~-----~~~~h~~~v~~~~~s~d~~~las~-~~dg~i~iwd~~~~~~~~~~~~~~~~  129 (683)
                      |.+|.++.++.|.-.+++......     .+..+...+..++|.+..++|.-. ..++.|+..++............   
T Consensus         1 ~~fLl~s~~~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~---   77 (263)
T d1npea_           1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD---   77 (263)
T ss_dssp             CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT---
T ss_pred             CCEEEEeCCCeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEec---
Confidence            568899988999988887654322     244456678899999877766655 45567888887655332222111   


Q ss_pred             CCcccceeeeeecceeeeEeeccceEEE-eecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCc
Q psy15995        130 GPIKDIGTLLSLTSIRNILVLSIGFYIA-SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE  208 (683)
Q Consensus       130 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~  208 (683)
                                 ...+..+++..-+..|. +-...+.|.+.++.......  ........+..+++.|...+++....+..
T Consensus        78 -----------~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~--l~~~~l~~p~~l~vdp~~g~ly~t~~~~~  144 (263)
T d1npea_          78 -----------LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV--LFDTGLVNPRGIVTDPVRGNLYWTDWNRD  144 (263)
T ss_dssp             -----------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE--EECSSCSSEEEEEEETTTTEEEEEECCSS
T ss_pred             -----------cccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEE--EecccccCCcEEEEecccCcEEEeecCCC
Confidence                       13467788876555444 55567789999987654321  11222356889999998888887654432


Q ss_pred             e-EEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEE
Q psy15995        209 R-FGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHF  287 (683)
Q Consensus       209 ~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  287 (683)
                      . .+.....+...........-.....+++.+.++.+..+-...+.|...+.........+.+.. ....+++. ++...
T Consensus       145 ~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~-~P~~lav~-~~~lY  222 (263)
T d1npea_         145 NPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ-YPFAVTSY-GKNLY  222 (263)
T ss_dssp             SCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCC-SEEEEEEE-TTEEE
T ss_pred             CcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCC-CcEEEEEE-CCEEE
Confidence            2 122223332222222333445678999998887645555677889999886655444444333 34577775 33333


Q ss_pred             EEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEcc
Q psy15995        288 ASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP  326 (683)
Q Consensus       288 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~  326 (683)
                      .+-...+.|...|..+++....+.. ........++..+
T Consensus       223 wtd~~~~~I~~~~~~~g~~~~~~~~-~~~~~~~gi~v~~  260 (263)
T d1npea_         223 YTDWKTNSVIAMDLAISKEMDTFHP-HKQTRLYGITIAL  260 (263)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEECC-SSCCCCCCEEEEC
T ss_pred             EEECCCCEEEEEECCCCccceEECC-CCCCCcceEEEeC
Confidence            4444668899999888887766542 2333444555543

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.33  E-value=0.00031  Score=59.53  Aligned_cols=232  Identities=13%  Similarity=0.092  Sum_probs=141.4

Q ss_pred             eCCCCCeEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcc-cccccccccCCC
Q psy15995         52 GDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE-HILKNEFHPIGG  130 (683)
Q Consensus        52 ~s~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~-~~~~~~~~~~~~  130 (683)
                      .+|..+.||.-++..+.++|+++.+.++.+.- ..+|.--.|-.+. .|+-.... .|.=|+++... +.+.++.++   
T Consensus        70 MhP~~~IiALrag~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~lVT~t-aVYHW~~~g~s~P~k~fdR~~---  143 (327)
T d1utca2          70 MNPASKVIALKAGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVTDN-AVYHWSMEGESQPVKMFDRHS---  143 (327)
T ss_dssp             ECSSSSEEEEEETTEEEEEETTTTEEEEEEEC-SSCCCEEEESSSS-EEEEECSS-EEEEEESSSSCCCEEEEECCG---
T ss_pred             cCCCCcEEEEecCCeEEEEehhHhhhhceEEc-CCCcEEEEecCCC-EEEEEcCC-ceEEEcccCCCCchhhhhhcc---
Confidence            58999999999999999999999998877663 4467777777665 45444433 69999995432 222222222   


Q ss_pred             CcccceeeeeecceeeeEeeccceEEEeec-------CCccEEEEeccccceeeeccccccCCCeeEEEEcCC--CCeEE
Q psy15995        131 PIKDIGTLLSLTSIRNILVLSIGFYIASGD-------ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPD--NQRMV  201 (683)
Q Consensus       131 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~  201 (683)
                            .+ ....|-....+++.++++..+       -.|.+.+|..+.+.   ...+.+|.+.-..+.+..+  ...++
T Consensus       144 ------~L-~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~---sQ~ieGhaa~F~~~~~~g~~~~~~lf  213 (327)
T d1utca2         144 ------SL-AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV---SQPIEGHAASFAQFKMEGNAEESTLF  213 (327)
T ss_dssp             ------GG-TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE---EEEECCSEEEEEEECCTTCSSCEEEE
T ss_pred             ------cc-cCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCc---CccccceeeeeEEEEcCCCCCCceEE
Confidence                  11 125677778888888877533       24778999987753   2334443332222222211  11111


Q ss_pred             EEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCC--------ceeeec----c
Q psy15995        202 VVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF--------KFKMTK----Q  269 (683)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--------~~~~~~----~  269 (683)
                      +.....                                         ...+.+++.++...        +....+    .
T Consensus       214 ~fa~r~-----------------------------------------~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppe  252 (327)
T d1utca2         214 CFAVRG-----------------------------------------QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE  252 (327)
T ss_dssp             EEEEEE-----------------------------------------TTEEEEEEEECSCCCTTCCCCCCEEEECCCCTT
T ss_pred             EEEECC-----------------------------------------CCCcEEEEEEcCCCccCCCCCcceeEEEECCcc
Confidence            111100                                         01122333332110        000001    1


Q ss_pred             ccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEE
Q psy15995        270 EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKL  342 (683)
Q Consensus       270 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  342 (683)
                      ...+-..++..++.-..+...+.-|.+++||++++.++..-+.  ....|...+-..+..-+++...+|.|..
T Consensus       253 a~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRI--s~~~iF~~a~~~~~~Gi~~VNr~GqVl~  323 (327)
T d1utca2         253 AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI--SGETIFVTAPHEATAGIIGVNRKGQVLS  323 (327)
T ss_dssp             CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred             ccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeec--CCCceEEeccCCCCceEEEECCCCeEEE
Confidence            2245567788888888888899999999999999999888765  6677776666666666777777776653

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=98.30  E-value=0.0003  Score=68.98  Aligned_cols=108  Identities=10%  Similarity=0.092  Sum_probs=63.7

Q ss_pred             EEEEEc-CCCcEEEEeCC-CCeeEEeccCCcccc--C-------eEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEE
Q psy15995        286 HFASAG-FDGKVFLYDGA-SADLVSELGNPAHKG--G-------VYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEF  354 (683)
Q Consensus       286 ~l~~~~-~dg~i~iw~~~-~~~~~~~~~~~~~~~--~-------i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  354 (683)
                      .+++++ .++.|...|.. +|+.+.++.......  .       -..+++.  +..++.++.++.+.-.|.++++.+...
T Consensus        64 ~vyv~t~~~~~v~Alda~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~--~~~i~~~~~~g~l~alda~tG~~~w~~  141 (571)
T d2ad6a1          64 MMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AGQIVKKQANGHLLALDAKTGKINWEV  141 (571)
T ss_dssp             EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             EEEEecCCCCeEEEEeCCCCCceEEEecCCCCcccccccccCcCCCcceee--CCeEEEEeCCCcEEeeehhhhhhhccc
Confidence            344444 36788888874 688877764211100  0       0223443  346788889999999999999988777


Q ss_pred             EecCcceeceEEE--EecCCEEEEEec------CCcEEEEecCCCCcce
Q psy15995        355 IMGNQVEDQQVSC--LWQGDYLLTVSL------SGFISYLDVNNPSTPI  395 (683)
Q Consensus       355 ~~~~~~~~~~~~~--~~~~~~l~~~~~------~g~i~~~~~~~~~~~~  395 (683)
                      .............  .--+..++++..      .|.|.-+|..++...-
T Consensus       142 ~~~~~~~~~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W  190 (571)
T d2ad6a1         142 EVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKW  190 (571)
T ss_dssp             ECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred             cccccccccceeecCeEeCCeEEEeeccccccccCcEEEEECCCCcEEE
Confidence            5433222111111  113455555553      6789999988865543

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=98.29  E-value=0.00018  Score=70.70  Aligned_cols=309  Identities=12%  Similarity=0.081  Sum_probs=169.3

Q ss_pred             CCCeEEEecCCeEEEEeCCCCcccccccCc----------ccce-EEEEECCCCcEEEEecCCCCEEEEeCCCccccccc
Q psy15995         55 KGKNFLYTNGNSVIIRNIENPAISDIYTEH----------SCAV-NVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKN  123 (683)
Q Consensus        55 ~~~~l~~~~~~~i~v~~~~~~~~~~~~~~h----------~~~v-~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~  123 (683)
                      +|..++...++.|+=+|.++|+.+-.+...          ...+ ..+++. + ..+..++.|+.+.-.|..+++.+.+.
T Consensus        77 ~g~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~-~-~~v~~~t~~g~l~alda~tG~~~W~~  154 (573)
T d1kb0a2          77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW-K-GKVYVGAWDGRLIALDAATGKEVWHQ  154 (573)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE-T-TEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEE-C-CcEEEEecccceeeeccccccceecc
Confidence            455555555667777777777765443211          0011 112221 2 24556677888888888888877654


Q ss_pred             ccccCCCCcccceeeeeecceeeeEeeccceEEEe-----ecCCccEEEEeccccceeeeccccccC-------------
Q psy15995        124 EFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIAS-----GDISGKVRIWDTVNKEHILKNEFHPIG-------------  185 (683)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-----~~~d~~i~iwd~~~~~~~~~~~~~~~~-------------  185 (683)
                      .........         ..+......-++..++-     ....|.|+-+|..+|+.+.+.......             
T Consensus       155 ~~~~~~~~~---------~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~  225 (573)
T d1kb0a2         155 NTFEGQKGS---------LTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRA  225 (573)
T ss_dssp             ETTTTCCSS---------CBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHH
T ss_pred             cCccCCcce---------EEeecceEEEeccEEEeeccccccccceEEEEecCCccceeeeeeccccCCCCCCccccccc
Confidence            432111000         00001011112322221     123578999999999987764322110             


Q ss_pred             ----------------CCe-eEEEEcCCCCeEEEEecCC-----------------ceEEEEEEccCCCceeeeecCCcC
Q psy15995        186 ----------------GPI-KDIAWSPDNQRMVVVGEGR-----------------ERFGHVFMSETGTSVGEISGQSKP  231 (683)
Q Consensus       186 ----------------~~i-~~~~~s~~~~~l~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~  231 (683)
                                      +.+ ...++.++...++......                 ...+.-.+.++++.....+.....
T Consensus       226 ~~t~~~~~~~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svvAld~~tG~~~W~~q~~~~d  305 (573)
T d1kb0a2         226 ARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGD  305 (573)
T ss_dssp             HTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTC
T ss_pred             ccccCCCCceeecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEEEecccchheeecccccCcc
Confidence                            111 2345556655555433221                 111334445566655544432221


Q ss_pred             ---------eEEEEeecCC--CeEEEEeeCCCeEEEEcCCCCceeeecccccc---------------------------
Q psy15995        232 ---------INSCDFKPSR--PFRIITGSEDNTIAVFEGPPFKFKMTKQEHSR---------------------------  273 (683)
Q Consensus       232 ---------v~~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~---------------------------  273 (683)
                               ........++  ...++.++.+|.+.++|..+++.+........                           
T Consensus       306 ~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (573)
T d1kb0a2         306 NWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDA  385 (573)
T ss_dssp             CSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEEC
T ss_pred             cccccccceeeecceecCCCceeeeeeccccceeEEeccccccccccccccccccccccccccceeeeeeccccccceEE
Confidence                     1122222222  22578888999999999998887653321100                           


Q ss_pred             --------CeEEEEECCCCCEEEEEcCC-------------------------------------------CcEEEEeCC
Q psy15995        274 --------FVQAVRYSPSGSHFASAGFD-------------------------------------------GKVFLYDGA  302 (683)
Q Consensus       274 --------~v~~~~~~~~~~~l~~~~~d-------------------------------------------g~i~iw~~~  302 (683)
                              .-..++++|+...++....+                                           |.+.-||+.
T Consensus       386 ~pg~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~G~l~AiD~~  465 (573)
T d1kb0a2         386 VPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPV  465 (573)
T ss_dssp             SSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETT
T ss_pred             eecccCCccccccccCCCcceEEeeccccceeeecccccccccCCCCccccccccccccccccCCCCCCCcccEEEeCCC
Confidence                    01124667776655543221                                           357778888


Q ss_pred             CCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCC-EEEEE
Q psy15995        303 SADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD-YLLTV  377 (683)
Q Consensus       303 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~  377 (683)
                      +++.+......   .+...=..+-.+.++++++.||.++.+|.++++.+.++..........+.+..+++ ++++.
T Consensus       466 tGk~~W~~~~~---~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQYv~v~  538 (573)
T d1kb0a2         466 AQKAAWSVEHV---SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVA  538 (573)
T ss_dssp             TTEEEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred             CCceEeeecCC---CCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEEE
Confidence            88887776532   12111122335778889999999999999999999999988877777777767776 44433

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.29  E-value=0.00017  Score=71.11  Aligned_cols=267  Identities=12%  Similarity=0.067  Sum_probs=158.5

Q ss_pred             CcEEEEecCCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec------CCccEEEEec
Q psy15995         97 GFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD------ISGKVRIWDT  170 (683)
Q Consensus        97 ~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~------~d~~i~iwd~  170 (683)
                      +.+++.++.|+.|.--|.++++.+.++........          ..++.--.--++. ++.+.      ..|.|+-+|+
T Consensus       121 ~~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~----------~~~t~~P~v~~~~-vivg~~~~e~~~~G~v~A~Da  189 (596)
T d1w6sa_         121 PALILKTQLDGNVAALNAETGETVWKVENSDIKVG----------STLTIAPYVVKDK-VIIGSSGAELGVRGYLTAYDV  189 (596)
T ss_dssp             CCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGT----------CBCCSCCEEETTE-EEECCBCGGGTCCCEEEEEET
T ss_pred             ceEEEEEeCCCCeEeeccccCceeccccccccccc----------cccccCCcEECCe-EEEeeccccccccCceEEEEC
Confidence            34788888999999999999988876643211000          0011100111222 33332      2588999999


Q ss_pred             cccceeeeccccc------------------------------------cCCCeeEEEEcCCCCeEEEEecCC-------
Q psy15995        171 VNKEHILKNEFHP------------------------------------IGGPIKDIAWSPDNQRMVVVGEGR-------  207 (683)
Q Consensus       171 ~~~~~~~~~~~~~------------------------------------~~~~i~~~~~s~~~~~l~~~~~~~-------  207 (683)
                      .+|+.+.+.....                                    ....-..+++.+....+.....+.       
T Consensus       190 ~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~  269 (596)
T d1w6sa_         190 KTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETM  269 (596)
T ss_dssp             TTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGG
T ss_pred             CCCcEEEEeeccCCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeeccccccccccccc
Confidence            9999887643211                                    011123456667666666654432       


Q ss_pred             -------ceEEEEEEccCCCceeeeecCCcC---------eEEEEe-ecCCC--eEEEEeeCCCeEEEEcCCCCceeeec
Q psy15995        208 -------ERFGHVFMSETGTSVGEISGQSKP---------INSCDF-KPSRP--FRIITGSEDNTIAVFEGPPFKFKMTK  268 (683)
Q Consensus       208 -------~~~~~~~~~~~~~~~~~~~~~~~~---------v~~~~~-~~~~~--~~l~~~~~d~~i~iw~~~~~~~~~~~  268 (683)
                             ...+.-.+.++|+.+..++.....         ...+.. ..+++  ..++....+|.+.++|..+++.+...
T Consensus       270 r~g~n~ys~sivAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~  349 (596)
T d1w6sa_         270 RPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN  349 (596)
T ss_dssp             SCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             ccccccccccccccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeec
Confidence                   122556777888887766542221         111111 12332  24777889999999999888876432


Q ss_pred             cccc-------------cC--------------------------eEEEEECCCCCEEEEEcC-----------------
Q psy15995        269 QEHS-------------RF--------------------------VQAVRYSPSGSHFASAGF-----------------  292 (683)
Q Consensus       269 ~~~~-------------~~--------------------------v~~~~~~~~~~~l~~~~~-----------------  292 (683)
                      ....             .+                          -..++++|+..+++....                 
T Consensus       350 ~~~~~~~~~~~~d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~  429 (596)
T d1w6sa_         350 KLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQ  429 (596)
T ss_dssp             ESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTS
T ss_pred             cccccccccccccccccccccCccccccCCccceeEecccccccccCccccCCCCceEEecccccccccccccccccccc
Confidence            1000             00                          012355666555444321                 


Q ss_pred             ----------------------CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCce
Q psy15995        293 ----------------------DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSV  350 (683)
Q Consensus       293 ----------------------dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  350 (683)
                                            -|.|.-||..+++.+.....   ..+..+=.++-.+.+++.++.||.++.+|.++++.
T Consensus       430 ~~~g~~~~~~~~~~g~~~~~~~~G~l~A~D~~TG~~~W~~~~---~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~  506 (596)
T d1w6sa_         430 FFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME---RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDL  506 (596)
T ss_dssp             CCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE---SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             cccccccccccCcccCcccCCCcceEEEEeCCCCceecccCC---CCCCccceeEecCCEEEEECCCCeEEEEECCCCcE
Confidence                                  14678888888887765532   22222222233577888899999999999999999


Q ss_pred             eeEEEecCcceeceEEEEecCCE-EEEE
Q psy15995        351 VSEFIMGNQVEDQQVSCLWQGDY-LLTV  377 (683)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~-l~~~  377 (683)
                      +.++..........+.+..+++. +++.
T Consensus       507 LW~~~~~~~~~a~P~tY~~dGkQYvav~  534 (596)
T d1w6sa_         507 LWKFKIPSGAIGYPMTYTHKGTQYVAIY  534 (596)
T ss_dssp             EEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred             eeEEECCCCcccCCeEEEECCEEEEEEE
Confidence            99999888888878877777763 4433

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.28  E-value=0.00081  Score=56.96  Aligned_cols=260  Identities=11%  Similarity=0.182  Sum_probs=154.8

Q ss_pred             CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCC
Q psy15995        293 DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD  372 (683)
Q Consensus       293 dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (683)
                      ..++.+.|+.+.....+...     .--+.-.+|..+.|+.-+ ...+.++|+++++.+..+....+.    .-+-+-..
T Consensus        44 ~~~VvIidl~n~~~~~Rrpi-----~AdsAIMhP~~~IiALra-g~~LQiFnletK~klks~~~~e~V----vfWkWis~  113 (327)
T d1utca2          44 QAQVVIIDMNDPSNPIRRPI-----SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDV----TFWKWISL  113 (327)
T ss_dssp             EEEEEEEETTSTTSCEEEEC-----CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCC----CEEEESSS
T ss_pred             CceEEEEECCCCCcceeccc-----chhhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCCCc----EEEEecCC
Confidence            34788888876653322211     223455678888777766 458999999999999988776644    23333333


Q ss_pred             EEEEEecCCcEEEEecCCCCcceeeeeecc----ccEEEEEEeCCCCEEEEEe---C----CCcEEEEcCCCCCcceecc
Q psy15995        373 YLLTVSLSGFISYLDVNNPSTPIRVIKGHN----KPITALALSPDRGTVFTGS---H----DGFITRWNAKTGENDRVQG  441 (683)
Q Consensus       373 ~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~---~----dg~i~~w~~~~~~~~~~~~  441 (683)
                      ..+.--.+..++-|++.....|.+.+..|.    ..|..-..+++.++++..+   .    .|.+.+|..+.+.....  
T Consensus       114 ~~L~lVT~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ~i--  191 (327)
T d1utca2         114 NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI--  191 (327)
T ss_dssp             SEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEE--
T ss_pred             CEEEEEcCCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCccc--
Confidence            333444566799999977777888887765    3677888899999987443   2    35678898876544332  


Q ss_pred             CCCCcceeEEEEeCC----eEEEE----EcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeCCc
Q psy15995        442 AGHGNQINGMKATGE----LLYTC----GIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVENGA  513 (683)
Q Consensus       442 ~~~~~~v~~~~~~~~----~l~~~----~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (683)
                      .+|.+.-..+...++    .+++-    ...+++.+.++..........  ......+.++++                 
T Consensus       192 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f--~kk~vdi~fppe-----------------  252 (327)
T d1utca2         192 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF--PKKAVDVFFPPE-----------------  252 (327)
T ss_dssp             CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCC--CCEEEECCCCTT-----------------
T ss_pred             cceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCC--cceeEEEECCcc-----------------
Confidence            345444444444322    12221    123678888877642211100  000000000000                 


Q ss_pred             eeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEE
Q psy15995        514 KVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVV  589 (683)
Q Consensus       514 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~  589 (683)
                           ....-+.++.+++....+..-+.-|.+++||++++..+....+. .+.|-..+-..+..=+++...+|.|.
T Consensus       253 -----a~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs-~~~iF~~a~~~~~~Gi~~VNr~GqVl  322 (327)
T d1utca2         253 -----AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS-GETIFVTAPHEATAGIIGVNRKGQVL  322 (327)
T ss_dssp             -----CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEEETTTTEEEEEETTSEEE
T ss_pred             -----ccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecC-CCceEEeccCCCCceEEEECCCCeEE
Confidence                 01234578899999999999999999999999999887555442 23333333333333344444555543

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=98.19  E-value=0.0017  Score=63.45  Aligned_cols=107  Identities=14%  Similarity=0.054  Sum_probs=65.2

Q ss_pred             EEEEEcCCCcEEEEeCCCCeeEEeccCCccc---------cCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEe
Q psy15995        286 HFASAGFDGKVFLYDGASADLVSELGNPAHK---------GGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIM  356 (683)
Q Consensus       286 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  356 (683)
                      .+++++.++.|.-.|.++|+.+.++......         ..-..++..  +..++.+..++.|.-.|..+++.+..+..
T Consensus        68 ~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~g~l~Alda~tG~~~w~~~~  145 (560)
T d1kv9a2          68 VIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GDKVYVGTLDGRLIALDAKTGKAIWSQQT  145 (560)
T ss_dssp             EEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             EEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCccee--CCeEEEEeCCCEEEEEECCCCcEEeccCc
Confidence            5666677889999999999988875321100         000112222  45688888999999999999999887765


Q ss_pred             cCcceeceEEEE--ecCCEEEEEec------CCcEEEEecCCCCcc
Q psy15995        357 GNQVEDQQVSCL--WQGDYLLTVSL------SGFISYLDVNNPSTP  394 (683)
Q Consensus       357 ~~~~~~~~~~~~--~~~~~l~~~~~------~g~i~~~~~~~~~~~  394 (683)
                      ............  -.+..++++..      .|.|.-+|..+++..
T Consensus       146 ~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~  191 (560)
T d1kv9a2         146 TDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLA  191 (560)
T ss_dssp             SCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred             cCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEE
Confidence            433222111111  13444444433      356888888775543

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=98.12  E-value=0.00022  Score=70.14  Aligned_cols=353  Identities=12%  Similarity=0.086  Sum_probs=177.4

Q ss_pred             EEEEeeCCCeEEEEcCCCCceeeeccccc----------cCe-EEEEECCCCCEEEEEcCCCcEEEEeCCCCeeEEeccC
Q psy15995        244 RIITGSEDNTIAVFEGPPFKFKMTKQEHS----------RFV-QAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN  312 (683)
Q Consensus       244 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----------~~v-~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  312 (683)
                      .++.++.++.|.-+|.++++.+-.+....          ..+ ..+.+.  +..++.++.|+.+.-.|..+|+.+.....
T Consensus        79 ~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~~~t~~g~l~alda~tG~~~W~~~~  156 (573)
T d1kb0a2          79 IMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAWDGRLIALDAATGKEVWHQNT  156 (573)
T ss_dssp             EEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred             EEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEE--CCcEEEEecccceeeeccccccceecccC
Confidence            36677778888889999998877653210          011 112222  23577788899999999999998765543


Q ss_pred             CccccCeEEEEEcc--CCCEEEEEEC------CCcEEEEECCCCceeeEEEecCcce-----------------------
Q psy15995        313 PAHKGGVYAVAWKP--DGTQLLTASG------DKTCKLWDIETKSVVSEFIMGNQVE-----------------------  361 (683)
Q Consensus       313 ~~~~~~i~~~~~~~--~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~-----------------------  361 (683)
                      ..+...-..+.-.|  -+..+++++.      .|.|+-+|.++++.+.++.......                       
T Consensus       157 ~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~t~~~~~~~~  236 (573)
T d1kb0a2         157 FEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWW  236 (573)
T ss_dssp             TTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHH
T ss_pred             ccCCcceEEeecceEEEeccEEEeeccccccccceEEEEecCCccceeeeeeccccCCCCCCcccccccccccCCCCcee
Confidence            11111100111111  1334555432      4679999999999988875432110                       


Q ss_pred             --------eceEEEEecCCEEEEEecC-------------------CcEEEEecCCCCcceeeeee-c-------cccEE
Q psy15995        362 --------DQQVSCLWQGDYLLTVSLS-------------------GFISYLDVNNPSTPIRVIKG-H-------NKPIT  406 (683)
Q Consensus       362 --------~~~~~~~~~~~~l~~~~~~-------------------g~i~~~~~~~~~~~~~~~~~-~-------~~~v~  406 (683)
                              -...+..++...++....+                   ..+.-.|..++...-..... |       ..+..
T Consensus       237 ~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svvAld~~tG~~~W~~q~~~~d~wd~d~~~~~~  316 (573)
T d1kb0a2         237 EAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMI  316 (573)
T ss_dssp             HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCE
T ss_pred             ecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEEEecccchheeecccccCcccccccccceee
Confidence                    0123334444444433221                   12333444432221111000 1       11112


Q ss_pred             EEEEeCCC---CEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCcee
Q psy15995        407 ALALSPDR---GTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVK  483 (683)
Q Consensus       407 ~~~~~~~~---~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~  483 (683)
                      ......++   ..++.++.+|.+.++|..+++.+..........+..+...+..+           ......        
T Consensus       317 l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~--------  377 (573)
T d1kb0a2         317 LADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPI-----------GIAAAR--------  377 (573)
T ss_dssp             EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEE-----------ECGGGG--------
T ss_pred             ecceecCCCceeeeeeccccceeEEecccccccccccccccccccccccccccee-----------eeeecc--------
Confidence            22222233   35677888999999999999877654322222221111101100           000000        


Q ss_pred             cCCCCceeeecCCeEEEEEeceEEEEeCCceeeeec---CCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCccee
Q psy15995        484 LGSQPRGLDIDENTLVTVTVKQISIVENGAKVSSLP---IDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAE  560 (683)
Q Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  560 (683)
                      ..                          .......+   ....-..++++|+.+++++...+....+......+......
T Consensus       378 ~~--------------------------~~~~~~~pg~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~  431 (573)
T d1kb0a2         378 DG--------------------------SKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGP  431 (573)
T ss_dssp             CT--------------------------TSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCT
T ss_pred             cc--------------------------ccceEEeecccCCccccccccCCCcceEEeeccccceeeecccccccccCCC
Confidence            00                          00000000   01112356889999999888877776666654433221111


Q ss_pred             ec-C-CcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCC
Q psy15995        561 LD-H-LGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       561 ~~-~-~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~  638 (683)
                      .. . ........+ +.+. -.....-|.+.-||+.+++.+-....   ..+...=..+-.+.++++|+.||.++.+|.+
T Consensus       432 ~~~~~g~~~~~~~~-~~~~-p~~~~~~G~l~AiD~~tGk~~W~~~~---~~p~~gg~lstagglVF~G~~dg~l~A~Da~  506 (573)
T d1kb0a2         432 GKPQSGTGWNTAKF-FNAE-PPKSKPFGRLLAWDPVAQKAAWSVEH---VSPWNGGTLTTAGNVVFQGTADGRLVAYHAA  506 (573)
T ss_dssp             TSTTGGGTCCCCEE-ECSS-CCCSCCEEEEEEEETTTTEEEEEEEE---SSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred             Cccccccccccccc-cccC-CCCCCCcccEEEeCCCCCceEeeecC---CCCCCCceEEEcCCEEEEECCCCeEEEEECC
Confidence            00 0 000000000 0000 00011226788889988888765443   2222222233467899999999999999999


Q ss_pred             CCceeeEeec
Q psy15995        639 SPAKHIIIKN  648 (683)
Q Consensus       639 ~~~~~~~~~~  648 (683)
                      +++.+-.+..
T Consensus       507 TGe~LW~~~~  516 (573)
T d1kb0a2         507 TGEKLWEAPT  516 (573)
T ss_dssp             TCCEEEEEEC
T ss_pred             CCcEeEEEEC
Confidence            9999987765

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.08  E-value=5.1e-05  Score=68.26  Aligned_cols=228  Identities=13%  Similarity=0.115  Sum_probs=140.7

Q ss_pred             EEEECC---CCcEEEEec-CCCCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeec--cceEEEeecCC-
Q psy15995         90 VAKYSP---SGFYIASGD-ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLS--IGFYIASGDIS-  162 (683)
Q Consensus        90 ~~~~s~---d~~~las~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~d-  162 (683)
                      .+.+..   ||+||+..+ .+++|.+-|+.+.+....++.. ..            ..+..+...+  .-.|++..+.. 
T Consensus        89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iP-n~------------~~~HG~r~~~~p~T~YV~~~~e~~  155 (459)
T d1fwxa2          89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIP-NA------------KGIHGLRPQKWPRSNYVFCNGEDE  155 (459)
T ss_dssp             EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECS-SC------------CSEEEEEECCSSBCSEEEEEECSC
T ss_pred             cccccCCccceeEEEEEcCCCceEEEEECcceeeeEEEecC-CC------------CCCceeecccCCCeEEEEccCccc
Confidence            444544   899998766 6778999999988765433321 11            3344444443  33366655442 


Q ss_pred             -----------------ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCc-------------eEEE
Q psy15995        163 -----------------GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE-------------RFGH  212 (683)
Q Consensus       163 -----------------~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~-------------~~~~  212 (683)
                                       +.+.++|..+.+...+....   +....+.+++||+++++.+.+.+             -.+.
T Consensus       156 vP~pndg~~l~d~~~y~~~~t~ID~~tm~V~~QV~V~---g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~  232 (459)
T d1fwxa2         156 TPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVS---GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIV  232 (459)
T ss_dssp             EESSCSSSSTTCGG-EEEEEEEEETTTTEEEEEEEES---SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEE
T ss_pred             cccCCCCccccchhhcceEEEEEecCCceEEEEeeeC---CChhccccCCCCCEEEEEeccccCCcchhhcccccceEEE
Confidence                             33678899988877666554   56778999999999999875432             1244


Q ss_pred             EEEccC-------CC-----ceeeee-------------cCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee--
Q psy15995        213 VFMSET-------GT-----SVGEIS-------------GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK--  265 (683)
Q Consensus       213 ~~~~~~-------~~-----~~~~~~-------------~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~--  265 (683)
                      +++|..       |+     -+..+.             .-......+.++|||++.++++.-+.++.++|.+.....  
T Consensus       233 V~n~~rie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~  312 (459)
T d1fwxa2         233 VFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFY  312 (459)
T ss_dssp             EEEHHHHHHHHHHTCSEEETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHH
T ss_pred             EechHHhHHhhhcCCcEEeCCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhc
Confidence            555531       10     011111             112334578999999998899999999999997532211  


Q ss_pred             ---------eeccccccCeEEEEECCCCCEEEEEcCCCcEEEEeCCCC----------eeEEeccCCccccCeEEE----
Q psy15995        266 ---------MTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA----------DLVSELGNPAHKGGVYAV----  322 (683)
Q Consensus       266 ---------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----------~~~~~~~~~~~~~~i~~~----  322 (683)
                               .......-....-+|..+|....+---|..|.-|++...          ..+..+..  |-. +-.+    
T Consensus       313 ~~~~~~~~~~~e~elglgPLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v--~y~-~gh~~~~~  389 (459)
T d1fwxa2         313 ENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDV--HYQ-PGHLKTVM  389 (459)
T ss_dssp             SCC-GGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEEC--SSC-EEEEEETT
T ss_pred             ccCCccccEEeecccCcCccccccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceecccc--ccC-CCCCccCc
Confidence                     111122334566788888865556667999999997432          33444432  221 1122    


Q ss_pred             --EEccCCCEEEEEEC
Q psy15995        323 --AWKPDGTQLLTASG  336 (683)
Q Consensus       323 --~~~~~~~~l~~~~~  336 (683)
                        ...|+|++|++...
T Consensus       390 g~t~~~dgk~l~~~nk  405 (459)
T d1fwxa2         390 GETLDATNDWLVCLSK  405 (459)
T ss_dssp             TTSTTCCSSEEEEEES
T ss_pred             CCcCCCCCCEEEEecc
Confidence              23578999998863

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.07  E-value=0.0013  Score=64.67  Aligned_cols=111  Identities=14%  Similarity=0.126  Sum_probs=65.5

Q ss_pred             CCEEEEEcCCCcEEEEeC-CCCeeEEeccCCccc---------cCeEEEEEccC----CCEEEEEECCCcEEEEECCCCc
Q psy15995        284 GSHFASAGFDGKVFLYDG-ASADLVSELGNPAHK---------GGVYAVAWKPD----GTQLLTASGDKTCKLWDIETKS  349 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~-~~~~~~~~~~~~~~~---------~~i~~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~  349 (683)
                      |.++++++.++.+...|. ++|+.+.++......         ..-..+++.++    ..+++.++.|+.|.-.|.++++
T Consensus        63 g~ly~~t~~~~~v~a~d~~~tG~~~W~~~~~~~~~~~~~~~~~~~~RGv~~~~~~~~~~~~v~~~t~dg~l~Alda~tG~  142 (596)
T d1w6sa_          63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE  142 (596)
T ss_dssp             TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred             CEEEEeeCCCCcEEEEeCCCCCCEEEEecCCCCcccccccccccccceeEEecCCCCCceEEEEEeCCCCeEeeccccCc
Confidence            433333444566777775 467777665421110         01134555443    3468888999999999999999


Q ss_pred             eeeEEEecCcceeceEEE--EecCCEEEEEec------CCcEEEEecCCCCcc
Q psy15995        350 VVSEFIMGNQVEDQQVSC--LWQGDYLLTVSL------SGFISYLDVNNPSTP  394 (683)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~------~g~i~~~~~~~~~~~  394 (683)
                      .+..+..........+..  .--++.++++..      .|.|+-+|..+++..
T Consensus       143 ~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~  195 (596)
T d1w6sa_         143 TVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQV  195 (596)
T ss_dssp             EEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEE
T ss_pred             eeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEE
Confidence            998876543222111111  113556666654      478999999886554

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=98.03  E-value=0.00015  Score=68.10  Aligned_cols=163  Identities=11%  Similarity=0.022  Sum_probs=93.6

Q ss_pred             CeEEEEECCCCCEEEEEcCCC-----------cEEEEeCCCCeeEEeccC-CccccCeEEEEEccCCCEEEEEECC-CcE
Q psy15995        274 FVQAVRYSPSGSHFASAGFDG-----------KVFLYDGASADLVSELGN-PAHKGGVYAVAWKPDGTQLLTASGD-KTC  340 (683)
Q Consensus       274 ~v~~~~~~~~~~~l~~~~~dg-----------~i~iw~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d-g~i  340 (683)
                      .+.......+|+.++.|+.+.           .+.+||..++........ ..+.......++.++++.++.++.+ ..+
T Consensus        21 ~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~  100 (387)
T d1k3ia3          21 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT  100 (387)
T ss_dssp             CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred             ccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcce
Confidence            334445566777777776421           377899988765332111 1133334566788999988888654 579


Q ss_pred             EEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEecC------CcEEEEecCCCCcce--------eeeeeccc---
Q psy15995        341 KLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVSLS------GFISYLDVNNPSTPI--------RVIKGHNK---  403 (683)
Q Consensus       341 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------g~i~~~~~~~~~~~~--------~~~~~~~~---  403 (683)
                      .+||..+......-...............+++.++.++..      ..+.+||.....-..        .....+..   
T Consensus       101 ~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~  180 (387)
T d1k3ia3         101 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR  180 (387)
T ss_dssp             EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred             eEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceee
Confidence            9999988765432222222233345555688888888753      358888887532100        00000000   


Q ss_pred             --cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCc
Q psy15995        404 --PITALALSPDRGTVFTGSHDGFITRWNAKTGEN  436 (683)
Q Consensus       404 --~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~  436 (683)
                        .-..+...++++.++.+..++.+.+++..+...
T Consensus       181 ~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~  215 (387)
T d1k3ia3         181 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDV  215 (387)
T ss_dssp             TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEE
T ss_pred             ccceeEEEEeCCCCEEEecCcCCcEEecCcccCcE
Confidence              011122345677777777777777777776554

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.98  E-value=0.0014  Score=60.99  Aligned_cols=113  Identities=12%  Similarity=0.136  Sum_probs=73.7

Q ss_pred             EEeeCCCCCeEEEecC------C------eEEEEeCCCCccccc---ccCcccceEEEEECCCCcEEEEecCC-CCEEEE
Q psy15995         49 VLGGDPKGKNFLYTNG------N------SVIIRNIENPAISDI---YTEHSCAVNVAKYSPSGFYIASGDIS-GKVRIW  112 (683)
Q Consensus        49 ~~~~s~~~~~l~~~~~------~------~i~v~~~~~~~~~~~---~~~h~~~v~~~~~s~d~~~las~~~d-g~i~iw  112 (683)
                      ......+|++++++.-      +      .+.+||..+++-...   ...|..-....++.+||++++.|+.+ ..+.+|
T Consensus        24 ~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~y  103 (387)
T d1k3ia3          24 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLY  103 (387)
T ss_dssp             EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEE
T ss_pred             EEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEe
Confidence            3445778999888631      1      478999998764322   12333333456788999999998755 579999


Q ss_pred             eCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCC------ccEEEEeccccc
Q psy15995        113 DTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDIS------GKVRIWDTVNKE  174 (683)
Q Consensus       113 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------~~i~iwd~~~~~  174 (683)
                      |..+......-..             .....-...+..+||+.++.|+.+      ..+.+||..+.+
T Consensus       104 d~~~~~w~~~~~~-------------~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~  158 (387)
T d1k3ia3         104 DSSSDSWIPGPDM-------------QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  158 (387)
T ss_dssp             EGGGTEEEECCCC-------------SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             cCccCcccccccc-------------cccccccceeeecCCceeeeccccccccccceeeeecCCCCc
Confidence            9887654321111             111233456778899998888753      368999998765

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.96  E-value=0.01  Score=57.99  Aligned_cols=82  Identities=21%  Similarity=0.269  Sum_probs=62.3

Q ss_pred             CCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCC
Q psy15995        293 DGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGD  372 (683)
Q Consensus       293 dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (683)
                      .|.+.-+|+.+++.+.....+   .++..-..+..+.++++++.||.++.+|.++++.+.++..........+.+..+++
T Consensus       465 ~G~l~AiD~~TG~i~W~~~~~---~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~  541 (582)
T d1flga_         465 VGSLRAMDPVSGKVVWEHKEH---LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE  541 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEES---SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             CCeEEEEcCCCCcEEeecCCC---CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence            367888999999988877532   22222223345778888999999999999999999999998888888888888885


Q ss_pred             -EEEEE
Q psy15995        373 -YLLTV  377 (683)
Q Consensus       373 -~l~~~  377 (683)
                       ++++.
T Consensus       542 qYv~i~  547 (582)
T d1flga_         542 QYLGVT  547 (582)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence             44443

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=0.0053  Score=53.04  Aligned_cols=241  Identities=8%  Similarity=-0.071  Sum_probs=137.8

Q ss_pred             eEEEecCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEec-CCCCEEEEeCCCcccccccccccCCCCcccce
Q psy15995         58 NFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGD-ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIG  136 (683)
Q Consensus        58 ~l~~~~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  136 (683)
                      +|.++....|+-.++++.+....+. ....+.+++|.+..++|.-.+ .++.|.--++........              
T Consensus         3 fLl~s~~~~I~~~~l~~~~~~~~~~-~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~--------------   67 (266)
T d1ijqa1           3 YLFFTNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS--------------   67 (266)
T ss_dssp             EEEEECBSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC----------------------
T ss_pred             EEEEECCCeEEEEECCCCcceeeeC-CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcc--------------
Confidence            6788888889999998776554443 455677899988777666543 344455444432210000              


Q ss_pred             eeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEc
Q psy15995        137 TLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMS  216 (683)
Q Consensus       137 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~  216 (683)
                                                              ...........+..+++.+.+..|..+..... .+.+...
T Consensus        68 ----------------------------------------~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~-~I~v~~~  106 (266)
T d1ijqa1          68 ----------------------------------------YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG-TVSVADT  106 (266)
T ss_dssp             ----------------------------------------CEEEECSSCSCCCEEEEETTTTEEEEEETTTT-EEEEEET
T ss_pred             ----------------------------------------eEEEEeCCCCCcceEEEeeccceEEEEecCCC-EEEeEec
Confidence                                                    00000011133445666666666665544332 2455555


Q ss_pred             cCCCceeeeecCCcCeEEEEeecCCCeEEEEe-eCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEE-cCCC
Q psy15995        217 ETGTSVGEISGQSKPINSCDFKPSRPFRIITG-SEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASA-GFDG  294 (683)
Q Consensus       217 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg  294 (683)
                      +.......+.........+++.|...+++.+. +..+.|...++............-.....+++.+.++.|..+ ...+
T Consensus       107 ~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~  186 (266)
T d1ijqa1         107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH  186 (266)
T ss_dssp             TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred             CCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccccccceeeEEEeeccccEEEEecCCcC
Confidence            54444444555556788899999776544443 234566666665444333333334567899999988766655 5567


Q ss_pred             cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEE
Q psy15995        295 KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFI  355 (683)
Q Consensus       295 ~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  355 (683)
                      .|...++...................++++. ++....+-..++.|...+..+++....+.
T Consensus       187 ~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~~~~g~~~~~~~  246 (266)
T d1ijqa1         187 SISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA  246 (266)
T ss_dssp             EEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred             EEEEEECCCCCEEEEEeCCCcccccEEEEEE-CCEEEEEECCCCeEEEEECCCCcceEEEE
Confidence            8998898655433333222233456678877 33444444466788888888776655443

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.89  E-value=0.01  Score=55.67  Aligned_cols=250  Identities=12%  Similarity=0.010  Sum_probs=132.4

Q ss_pred             CcccceEEEEECCCCcEEEEe-cCCC----CEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEE
Q psy15995         83 EHSCAVNVAKYSPSGFYIASG-DISG----KVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIA  157 (683)
Q Consensus        83 ~h~~~v~~~~~s~d~~~las~-~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  157 (683)
                      ++.-.+...++|||++++|-+ +.+|    .|++.|+.+++.+... ..              ......++|++|++.|+
T Consensus       122 ~~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~-i~--------------~~~~~~~~W~~D~~~~~  186 (430)
T d1qfma1         122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LE--------------RVKFSCMAWTHDGKGMF  186 (430)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EE--------------EECSCCEEECTTSSEEE
T ss_pred             cccceecceEecCCCCEEEEEeccccCchheeEEeccCcceecccc-cc--------------cccccceEEcCCCCEEE
Confidence            455566778899999999842 3333    5999999999755311 11              02235688999998776


Q ss_pred             eecC----------------CccEEEEeccccceeeeccccc--cCCCeeEEEEcCCCCeEEEEecCC-c--eEEEEEEc
Q psy15995        158 SGDI----------------SGKVRIWDTVNKEHILKNEFHP--IGGPIKDIAWSPDNQRMVVVGEGR-E--RFGHVFMS  216 (683)
Q Consensus       158 ~~~~----------------d~~i~iwd~~~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~~~-~--~~~~~~~~  216 (683)
                      -...                ...|..+.+.+...-....+..  ....+..+..++++++++...... .  ....+.+.
T Consensus       187 Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~  266 (430)
T d1qfma1         187 YNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDL  266 (430)
T ss_dssp             EEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEG
T ss_pred             EEEeccccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeC
Confidence            4322                1257777776653322222222  223466788899999987654322 1  12233333


Q ss_pred             cCCCc--------eeeeecCCcCeEEEEeecCCCeEEEEe--eCCCeEEEEcCCCCce---eeeccccccCeEEEEECCC
Q psy15995        217 ETGTS--------VGEISGQSKPINSCDFKPSRPFRIITG--SEDNTIAVFEGPPFKF---KMTKQEHSRFVQAVRYSPS  283 (683)
Q Consensus       217 ~~~~~--------~~~~~~~~~~v~~~~~~~~~~~~l~~~--~~d~~i~iw~~~~~~~---~~~~~~~~~~v~~~~~~~~  283 (683)
                      .....        ............ ...+.++.+.+.+-  +.++.+...++.....   ...+..+...+..-.+...
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~  345 (430)
T d1qfma1         267 QQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVR  345 (430)
T ss_dssp             GGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEET
T ss_pred             CCcccccccccceeEeecccccceE-EEecCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEE
Confidence            22110        111122222222 22233333322221  2245555555543321   2223334444544444444


Q ss_pred             CCEEEEEc-CCC--cEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEEC----CCcEEEEECCCCce
Q psy15995        284 GSHFASAG-FDG--KVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG----DKTCKLWDIETKSV  350 (683)
Q Consensus       284 ~~~l~~~~-~dg--~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~  350 (683)
                      +.+|+... .++  .|++++..++........  ..+.+..+...++...+...-.    -.++.-+|+.+++.
T Consensus       346 ~~~lvl~~~~~~~~~l~v~~~~~~~~~~~~~~--~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~~  417 (430)
T d1qfma1         346 SNFLVLCYLHDVKNTLQLHDLATGALLKIFPL--EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL  417 (430)
T ss_dssp             TTEEEEEEEETTEEEEEEEETTTCCEEEEECC--CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSC
T ss_pred             CCEEEEEEEcCCEeEEEEEECCCCcEEEecCC--CCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCCc
Confidence            55565443 444  588999988877655433  3455666655555554433322    25688889888764

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.87  E-value=0.00017  Score=64.85  Aligned_cols=271  Identities=11%  Similarity=0.137  Sum_probs=143.7

Q ss_pred             EEEEEECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEE-----------EEEecCCcEEEEecCCCCcceeee
Q psy15995        330 QLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYL-----------LTVSLSGFISYLDVNNPSTPIRVI  398 (683)
Q Consensus       330 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~~~~~g~i~~~~~~~~~~~~~~~  398 (683)
                      .|.+|+..|.++++-+.+++.+..+..........+-+......+           +.....+.+..|           =
T Consensus        15 ~f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~-----------G   83 (459)
T d1fwxa2          15 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDN-----------G   83 (459)
T ss_dssp             EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCC-----------C
T ss_pred             EEeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccC-----------C
Confidence            367788899999999999999988865544322222111100000           000000000000           0


Q ss_pred             eeccccEEEEEEeC---CCCEEEEEe-CCCcEEEEcCCCCCcceeccCCCCcceeEEEEe----CCeEEEEEcCCeEEEE
Q psy15995        399 KGHNKPITALALSP---DRGTVFTGS-HDGFITRWNAKTGENDRVQGAGHGNQINGMKAT----GELLYTCGIDDTIKQV  470 (683)
Q Consensus       399 ~~~~~~v~~~~~~~---~~~~l~~~~-~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~~~  470 (683)
                      ..|.   ..+.+..   ||+++++.. .+++|.+-|+.+.+............+..+...    -.+++..+.+..-   
T Consensus        84 D~HH---P~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP---  157 (459)
T d1fwxa2          84 DLHH---VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETP---  157 (459)
T ss_dssp             CBCC---EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEE---
T ss_pred             CcCC---CcccccCCccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccc---
Confidence            1121   1344443   889988776 578999999999888665544455555655543    4455555542210   


Q ss_pred             eCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEE--eCCceeeeecCCCCCcEEEEccCCCEEEEEcCCC-----
Q psy15995        471 DLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIV--ENGAKVSSLPIDYEPSSISLDHEHGLVAVGGADS-----  543 (683)
Q Consensus       471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----  543 (683)
                                   ++..-..+.-......     .+..+  +..+..........+..++++++|+++++.+.+.     
T Consensus       158 -------------~pndg~~l~d~~~y~~-----~~t~ID~~tm~V~~QV~V~g~ld~~~~s~dGK~af~TsyNSE~g~~  219 (459)
T d1fwxa2         158 -------------LVNDGTNMEDVANYVN-----VFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMT  219 (459)
T ss_dssp             -------------SSCSSSSTTCGG-EEE-----EEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSS
T ss_pred             -------------cCCCCccccchhhcce-----EEEEEecCCceEEEEeeeCCChhccccCCCCCEEEEEeccccCCcc
Confidence                         0000000000000000     00011  1223334444555677899999999998876431     


Q ss_pred             ----------cEEEEEc-----------------------CCCc-cCcceeecCCcCeeEEEECCCCCEEEEEe-CCCeE
Q psy15995        544 ----------KVHIYEL-----------------------NNKS-LSPKAELDHLGPVTDCSFSPSNEYLVASD-AHRKV  588 (683)
Q Consensus       544 ----------~i~i~d~-----------------------~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i  588 (683)
                                .+.+++.                       .... ......+.-......+.++|||+++++++ -+.++
T Consensus       220 l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tV  299 (459)
T d1fwxa2         220 LPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTV  299 (459)
T ss_dssp             HHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBE
T ss_pred             hhhcccccceEEEEechHHhHHhhhcCCcEEeCCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcE
Confidence                      1333333                       2110 01111122223456789999999998765 67899


Q ss_pred             EEEECCCCccc------------cccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCC
Q psy15995        589 VLYRVPDFELA------------HNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLA  638 (683)
Q Consensus       589 ~i~~~~~~~~~------------~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~  638 (683)
                      .|+|+..-...            ...+   ..-....-+|...|.-..|-.-|..|.-|++.
T Consensus       300 SViD~~Ki~~~~~~~~~~~~~~~~e~e---lglgPLht~fd~~g~aytslfids~v~kw~~~  358 (459)
T d1fwxa2         300 TVLDVTRFDAVFYENADPRSAVVAEPE---LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIE  358 (459)
T ss_dssp             EEEEGGGHHHHHHSCC-GGGGEEECCB---CCSCEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred             EEEEehhhhhhhcccCCccccEEeecc---cCcCccccccCCCceEEEEeeccceEEEEecc
Confidence            99999631111            1111   12335567888887666667789999999985

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.77  E-value=0.022  Score=55.61  Aligned_cols=145  Identities=12%  Similarity=0.105  Sum_probs=82.8

Q ss_pred             cEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCCCccccccce
Q psy15995        525 SSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPDFELAHNKEW  604 (683)
Q Consensus       525 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~  604 (683)
                      ...+++|+..++.+...+....++..............     .....-+     +.....|.+.-+|+.+++..-....
T Consensus       415 ~~~a~dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~-----~~~~~~G~l~AiD~~TG~i~W~~~~  484 (582)
T d1flga_         415 NPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLG-----MGFRIKR-----MYDDHVGSLRAMDPVSGKVVWEHKE  484 (582)
T ss_dssp             SCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCC-----EEEEEEE-----SCSSCSEEEEEECTTTCCEEEEEEE
T ss_pred             ccceecCCCCceeeeccccccccccccccccccccccc-----cCccccc-----cccCCCCeEEEEcCCCCcEEeecCC
Confidence            45678888887777766655445443322111000000     0000000     0112347788889888888765543


Q ss_pred             eeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc-cCC-eEEEe-e-----------
Q psy15995        605 GFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL-DND-LLVSV-G-----------  670 (683)
Q Consensus       605 ~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~-~-----------  670 (683)
                         ..++.+-..+-.+.++++|+.||.++-+|.++++.+-.+.... ...-.-+.|. +++ +++.. +           
T Consensus       485 ---~~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~-~~~~~P~ty~~~G~qYv~i~ag~g~~~~~~~g~  560 (582)
T d1flga_         485 ---HLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGS-GIVSPPITWEQDGEQYLGVTVGYGGAVPLWGGD  560 (582)
T ss_dssp             ---SSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS-CCCSCCEEEEETTEEEEEEEECCCSHHHHHCTH
T ss_pred             ---CCCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCC-CccccCEEEEECCEEEEEEEeCCCCcccccccc
Confidence               2333322234467788899999999999999999998876522 1111225555 664 44432 2           


Q ss_pred             ---------CCCcEEEEeeccC
Q psy15995        671 ---------QDCNTKIWEIAPF  683 (683)
Q Consensus       671 ---------~d~~v~vw~~~~~  683 (683)
                               ..+.|.++.|+++
T Consensus       561 ~~~~~~~~~~g~~l~vF~Lp~~  582 (582)
T d1flga_         561 MADLTRPVAQGGSFWVFKLPSW  582 (582)
T ss_dssp             HHHHHTTCCCCCEEEEEECCCC
T ss_pred             ccccccccCCCCEEEEEeCCCC
Confidence                     1457888888765

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.76  E-value=0.0094  Score=51.23  Aligned_cols=220  Identities=9%  Similarity=-0.018  Sum_probs=130.6

Q ss_pred             CCeeEEEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCcee
Q psy15995        186 GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFK  265 (683)
Q Consensus       186 ~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  265 (683)
                      ..+..++|.+..+.+..+...... +....++.+.....+......+..+++..-+..+..+-...+.|.+.++......
T Consensus        36 ~~~~~ld~D~~~~~iywsd~~~~~-I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~  114 (263)
T d1npea_          36 KVIIGLAFDCVDKVVYWTDISEPS-IGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR  114 (263)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTE-EEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             CcEEEEEEEeCCCEEEEEECCCCe-EEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEE
Confidence            457789999988888876655443 4445555444444444444678899998877765566667789999998765544


Q ss_pred             eeccccccCeEEEEECCCCCEEEEEcCC---CcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEE-CCCcEE
Q psy15995        266 MTKQEHSRFVQAVRYSPSGSHFASAGFD---GKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS-GDKTCK  341 (683)
Q Consensus       266 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~  341 (683)
                      .........+..+++.|...+++-....   +.|..-++...........  .-....++++.+.++.|+.+. ..+.|.
T Consensus       115 ~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~--~~~~P~glaiD~~~~~lYw~d~~~~~I~  192 (263)
T d1npea_         115 VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD--NLGLPNGLTFDAFSSQLCWVDAGTHRAE  192 (263)
T ss_dssp             EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT--TCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred             EEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeee--cccccceEEEeecCcEEEEEeCCCCEEE
Confidence            4344444678999999987777654322   2354445544333322221  334668999998888776664 567888


Q ss_pred             EEECCCCceeeEEEecCcceeceEEEEecCCEEEEEe-cCCcEEEEecCCCCcceeeeeeccccEEEEEEeC
Q psy15995        342 LWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVS-LSGFISYLDVNNPSTPIRVIKGHNKPITALALSP  412 (683)
Q Consensus       342 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  412 (683)
                      ..++...... .+..... .+..++  ..++.++... ..+.|...|...+................+++.+
T Consensus       193 ~~~~~g~~~~-~v~~~~~-~P~~la--v~~~~lYwtd~~~~~I~~~~~~~g~~~~~~~~~~~~~~~gi~v~~  260 (263)
T d1npea_         193 CLNPAQPGRR-KVLEGLQ-YPFAVT--SYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIAL  260 (263)
T ss_dssp             EEETTEEEEE-EEEECCC-SEEEEE--EETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred             EEECCCCCeE-EEECCCC-CcEEEE--EECCEEEEEECCCCEEEEEECCCCccceEECCCCCCCcceEEEeC
Confidence            8888754432 3322222 122333  3456665554 5577877877764332222222233344444443

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.70  E-value=0.015  Score=54.47  Aligned_cols=246  Identities=8%  Similarity=-0.038  Sum_probs=126.9

Q ss_pred             EEEeeCCCCCeEEEec--CC----eEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCC---------------
Q psy15995         48 IVLGGDPKGKNFLYTN--GN----SVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDIS---------------  106 (683)
Q Consensus        48 ~~~~~s~~~~~l~~~~--~~----~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~d---------------  106 (683)
                      ...++|||++++|++.  +|    .+++.|+++++.+..-- .......++|++|++.|+-...+               
T Consensus       128 ~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i-~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~  206 (430)
T d1qfma1         128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNL  206 (430)
T ss_dssp             EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCC
T ss_pred             cceEecCCCCEEEEEeccccCchheeEEeccCcceeccccc-ccccccceEEcCCCCEEEEEEeccccCcccccccccCC
Confidence            3467899999999983  33    79999999998754211 11223578999999987643221               


Q ss_pred             -CCEEEEeCCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeec---CCccEEEE--eccccceee---
Q psy15995        107 -GKVRIWDTVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGD---ISGKVRIW--DTVNKEHIL---  177 (683)
Q Consensus       107 -g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~d~~i~iw--d~~~~~~~~---  177 (683)
                       ..|..|.+.+...--.+-......          ......+..++++++++...   .++...+|  |+.......   
T Consensus       207 ~~~v~~h~lgt~~~~d~~v~~e~d~----------~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~  276 (430)
T d1qfma1         207 HQKLYYHVLGTDQSEDILCAEFPDE----------PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI  276 (430)
T ss_dssp             CCEEEEEETTSCGGGCEEEECCTTC----------TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS
T ss_pred             cceEEEEECCCCccccccccccccC----------CceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccc
Confidence             247777776653322211111000          02345567788999876432   23333444  544322110   


Q ss_pred             ---eccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEE--EccCCC--ceeee-ecCCcCeEEEEeecCCCeEEEEee
Q psy15995        178 ---KNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF--MSETGT--SVGEI-SGQSKPINSCDFKPSRPFRIITGS  249 (683)
Q Consensus       178 ---~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~--~~~~~~--~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~  249 (683)
                         ............ ..-. ++..+.+.+........+.  ......  ....+ ..+...+..-.+...+.++++...
T Consensus       277 ~~~~~~~~~~~~~~~-~~~~-~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~  354 (430)
T d1qfma1         277 LKWVKLIDNFEGEYD-YVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYL  354 (430)
T ss_dssp             CCCEEEECSSSSCEE-EEEE-ETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEE
T ss_pred             cceeEeecccccceE-EEec-CCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEE
Confidence               000111111122 2112 3333433333221112222  222222  11233 334555655555555555445555


Q ss_pred             CCC--eEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEcC----CCcEEEEeCCCCee
Q psy15995        250 EDN--TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGF----DGKVFLYDGASADL  306 (683)
Q Consensus       250 ~d~--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iw~~~~~~~  306 (683)
                      .++  .|++++..+++...........+..+...++...+...-.    =.++.-+|+.+++.
T Consensus       355 ~~~~~~l~v~~~~~~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~~  417 (430)
T d1qfma1         355 HDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL  417 (430)
T ss_dssp             ETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSC
T ss_pred             cCCEeEEEEEECCCCcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCCc
Confidence            554  4788888887766555545555666655566654433222    25788889888754

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=0.019  Score=49.44  Aligned_cols=222  Identities=11%  Similarity=-0.057  Sum_probs=135.0

Q ss_pred             ccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEEEccC----CCceeeeecCCcCeEEEEee
Q psy15995        163 GKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSET----GTSVGEISGQSKPINSCDFK  238 (683)
Q Consensus       163 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~~  238 (683)
                      ..|+-.++.+......   ......+.+++|.+..+.+..+...... +....++.    ......+......+..+++.
T Consensus        10 ~~I~~~~l~~~~~~~~---~~~~~~~~~id~d~~~~~lYw~D~~~~~-I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD   85 (266)
T d1ijqa1          10 HEVRKMTLDRSEYTSL---IPNLRNVVALDTEVASNRIYWSDLSQRM-ICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD   85 (266)
T ss_dssp             SSEEEEETTSCCCEEE---ECSCSSEEEEEEETTTTEEEEEETTTTE-EEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred             CeEEEEECCCCcceee---eCCCCceEEEEEEeCCCEEEEEECCCCE-EEEEEecCCCCCcceEEEEeCCCCCcceEEEe
Confidence            3588888876543222   2234567899999999888877655443 22223321    11122233334567789999


Q ss_pred             cCCCeEEEEeeCCCeEEEEcCCCCceeeeccccccCeEEEEECCCCCEEEEEc--CCCcEEEEeCCCCeeEEeccCCccc
Q psy15995        239 PSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAG--FDGKVFLYDGASADLVSELGNPAHK  316 (683)
Q Consensus       239 ~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~  316 (683)
                      +.+..+..+-...+.|.+.++..................+++.|...+|....  ..+.|...++...........  .-
T Consensus        86 ~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~--~~  163 (266)
T d1ijqa1          86 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE--NI  163 (266)
T ss_dssp             TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS--SC
T ss_pred             eccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceeccccc--cc
Confidence            87776666667778999999887766555555566789999999766665443  345677777655444333322  33


Q ss_pred             cCeEEEEEccCCCEEEEE-ECCCcEEEEECCCCceeeEEEecCcceeceEEEEecCCEEEEEe-cCCcEEEEecCCC
Q psy15995        317 GGVYAVAWKPDGTQLLTA-SGDKTCKLWDIETKSVVSEFIMGNQVEDQQVSCLWQGDYLLTVS-LSGFISYLDVNNP  391 (683)
Q Consensus       317 ~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~i~~~~~~~~  391 (683)
                      ....++++.+.++.|+.+ ...+.|...++...... .+............+...++.++... .++.|...+...+
T Consensus       164 ~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~-~~~~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~~~~g  239 (266)
T d1ijqa1         164 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG  239 (266)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred             ceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEE-EEEeCCCcccccEEEEEECCEEEEEECCCCeEEEEECCCC
Confidence            567899999988877766 44678888888654432 22222222223334444456666554 4566777666553

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=96.64  E-value=0.13  Score=45.35  Aligned_cols=77  Identities=10%  Similarity=0.179  Sum_probs=47.7

Q ss_pred             cCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceee------cCCcCeeEEEEC--CC--CCEEEEEeCCCeE
Q psy15995        519 PIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAEL------DHLGPVTDCSFS--PS--NEYLVASDAHRKV  588 (683)
Q Consensus       519 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~v~~~~~s--~~--~~~l~~~~~d~~i  588 (683)
                      ....++..+.+.++.+.|.++-++..|..++++..........      .....+..++.-  ++  |-+|++.-.+++.
T Consensus       177 ~~~~q~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f  256 (353)
T d1h6la_         177 KMNSQTEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSY  256 (353)
T ss_dssp             ECSSCEEEEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred             CCCCccceEEEeCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeE
Confidence            3344567888889889999998887777777653321111111      123456666643  23  3344555567889


Q ss_pred             EEEECCC
Q psy15995        589 VLYRVPD  595 (683)
Q Consensus       589 ~i~~~~~  595 (683)
                      .+||..+
T Consensus       257 ~vydr~~  263 (353)
T d1h6la_         257 AIYERQG  263 (353)
T ss_dssp             EEEESST
T ss_pred             EEEecCC
Confidence            9999876

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=96.01  E-value=0.25  Score=38.84  Aligned_cols=225  Identities=13%  Similarity=0.116  Sum_probs=115.9

Q ss_pred             CCEEEEEcCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEECCCcEEEEECCCCceeeEEEecCcceec
Q psy15995        284 GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSVVSEFIMGNQVEDQ  363 (683)
Q Consensus       284 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  363 (683)
                      .+.++++..+|.+.++-+..++.+...+     .+|... ..|...      -|..+.+-|+..++..+.+         
T Consensus        26 d~ll~~~~seG~vni~~l~g~~~vkLtk-----ePI~~~-~~Pk~~------ldfi~f~RDV~kGkE~Hai---------   84 (313)
T d2hu7a1          26 DKLLVVGFSEGSVNAYLYDGGETVKLNR-----EPINSV-LDPHYG------VGRVILVRDVSKGAEQHAL---------   84 (313)
T ss_dssp             TEEEEEEEETTEEEEEEESSSSCEECCS-----SCCSEE-CEECTT------BSEEEEEEECSTTSCCEEE---------
T ss_pred             CcEEEEEeccceEEEEEEeCCEEEEEec-----ccccCc-CCCccC------cceEEEEeehhcCcceeeE---------
Confidence            3467777778888888777776665433     233222 122211      2333445566666654432         


Q ss_pred             eEEEEecCCEEEEEecCCcEEEEecCCCCcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCC
Q psy15995        364 QVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAG  443 (683)
Q Consensus       364 ~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~  443 (683)
                                          ..-++..+.+..+.-....-.|.++++. +.+..++|+......+|-++.++........
T Consensus        85 --------------------~~~Nlk~~GEE~~i~spk~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vP  143 (313)
T d2hu7a1          85 --------------------FKVNTSRPGEEQRLEAVKPMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLP  143 (313)
T ss_dssp             --------------------EEEETTSTTCEEECTTSCSBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEES
T ss_pred             --------------------EEEccCCCCeeeEecCCceEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCC
Confidence                                2223332222222111122345666653 4466678888888999988888765544322


Q ss_pred             CCcce--------eEEEEe---CCeEEEEEc-CCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEeC
Q psy15995        444 HGNQI--------NGMKAT---GELLYTCGI-DDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVEN  511 (683)
Q Consensus       444 ~~~~v--------~~~~~~---~~~l~~~~~-d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (683)
                      .-.-|        ..+.+-   ...++++.- .|.+++++...+.                                   
T Consensus       144 pFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri~tpkeGS-----------------------------------  188 (313)
T d2hu7a1         144 GFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGS-----------------------------------  188 (313)
T ss_dssp             SCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEEECCSSEE-----------------------------------
T ss_pred             CcceEEeccCCeEEEEeeecCCcceEEEEecccCCEEEecCCCCc-----------------------------------
Confidence            22222        222222   122444444 6666666655432                                   


Q ss_pred             CceeeeecCCCCCcEEEEccCCCEEEEEcC---CCcEEEEEcCCCccCcceeec------CCcCeeEEEECCCCCEEEEE
Q psy15995        512 GAKVSSLPIDYEPSSISLDHEHGLVAVGGA---DSKVHIYELNNKSLSPKAELD------HLGPVTDCSFSPSNEYLVAS  582 (683)
Q Consensus       512 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~~~  582 (683)
                                  ++.....++.+. +++-+   +....-+|+..++.......+      ....|+-+-+.|++++++.+
T Consensus       189 ------------~~~ay~~~gnKV-~sdyEt~gEsywit~D~~s~~yerve~P~kd~~sy~p~~I~~~~Y~Pdd~L~iia  255 (313)
T d2hu7a1         189 ------------FSSASISPGMKV-TAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVA  255 (313)
T ss_dssp             ------------EEEEEECTTSCE-EEEEEESSCEEEEEECTTTCCEEECCCSSCHHHHHCCSEEEEEEECTTSCEEEEE
T ss_pred             ------------ccceeEccCcee-eeccCCCCceEEEEEecccCceeeeecCcccceeecceEEEeeeeCCCCcEEEEE
Confidence                        233333444333 32211   111223465554432111111      22346666799999999999


Q ss_pred             eCCCeEEEEECCCCcccc
Q psy15995        583 DAHRKVVLYRVPDFELAH  600 (683)
Q Consensus       583 ~~d~~i~i~~~~~~~~~~  600 (683)
                      -.||.-++|.  +|+.+.
T Consensus       256 krdG~s~lF~--nGk~in  271 (313)
T d2hu7a1         256 RREGRSAVFI--DGERVE  271 (313)
T ss_dssp             EETTEEEEEE--TTEEEC
T ss_pred             ecCCchheee--cceEec
Confidence            9999999987  455553

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.67  E-value=0.64  Score=41.02  Aligned_cols=193  Identities=15%  Similarity=0.112  Sum_probs=106.8

Q ss_pred             EEEEECCCCcEEEEecC------------CCCEEEEeCCCcccc-cccccccCCCCcccceeeeeecceeeeEe--eccc
Q psy15995         89 NVAKYSPSGFYIASGDI------------SGKVRIWDTVNKEHI-LKNEFHPIGGPIKDIGTLLSLTSIRNILV--LSIG  153 (683)
Q Consensus        89 ~~~~~s~d~~~las~~~------------dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--s~~~  153 (683)
                      ..|+..|||..+++++.            .|.|.++|+.+.+.. ..+.........  ..     -....+.+  .++|
T Consensus        38 EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~--~~-----f~PhGi~l~~~~dg  110 (340)
T d1v04a_          38 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDI--SS-----FNPHGISTFIDDDN  110 (340)
T ss_dssp             CEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCG--GG-----CCEEEEEEEECTTC
T ss_pred             ceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCC--cc-----eeccceeEEEcCCC
Confidence            36788899877766532            478999998765322 122211110000  00     01122222  3445


Q ss_pred             e-EEEee---cCCccEEEEeccccce--eeecccc-ccCCCeeEEEEcCCCCeEEEEecCC-------------ceEEEE
Q psy15995        154 F-YIASG---DISGKVRIWDTVNKEH--ILKNEFH-PIGGPIKDIAWSPDNQRMVVVGEGR-------------ERFGHV  213 (683)
Q Consensus       154 ~-~l~~~---~~d~~i~iwd~~~~~~--~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~~~-------------~~~~~~  213 (683)
                      + +|++.   ....+|.++++.....  ....... +......++++..++...++-....             .....+
T Consensus       111 ~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v  190 (340)
T d1v04a_         111 TVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFV  190 (340)
T ss_dssp             CEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEE
T ss_pred             cEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeE
Confidence            4 44443   3456788888764432  1111111 2235578999999998777632110             123566


Q ss_pred             EEccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeec--cccccCeEEEEECC-CCCEEEE
Q psy15995        214 FMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK--QEHSRFVQAVRYSP-SGSHFAS  289 (683)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~  289 (683)
                      +.++.++. ......-...+.++++|++++++++-+..+.|++|++...+.....  ..-....--+.+.+ +|.+.+.
T Consensus       191 ~~~~~~~~-~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva  268 (340)
T d1v04a_         191 TYYSPNDV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVG  268 (340)
T ss_dssp             EEECSSCE-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEE
T ss_pred             EEEcCCce-EEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEE
Confidence            77766554 3333344568999999999988888888999999987654322211  11234456677765 4444443

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.77  E-value=1  Score=40.01  Aligned_cols=181  Identities=10%  Similarity=-0.007  Sum_probs=99.2

Q ss_pred             cceeeeEeeccceEEEeecCCccEEEEeccccce-------eeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEEE
Q psy15995        142 TSIRNILVLSIGFYIASGDISGKVRIWDTVNKEH-------ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF  214 (683)
Q Consensus       142 ~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~-------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~~  214 (683)
                      ...+-+++++...++++|+.++ +.|-.+..-+.       .........-..|..++|+.|  .+++...++   +..+
T Consensus        37 ~~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~ip~v~~vafs~d--~l~v~~~~~---l~~~  110 (381)
T d1xipa_          37 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGD--QVLVSTRNA---LYSL  110 (381)
T ss_dssp             SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEEETT--EEEEEESSE---EEEE
T ss_pred             cccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccCCCCeEEEEeeCC--EEEEEeCCC---EEEE
Confidence            4466778888777788777765 55665432110       001111111236888999755  455554442   3444


Q ss_pred             EccCCCceeeeecCCcCeEEEEeecCCCeEEEEeeCCCeEEEEcCCCCceeeecc-----ccccCeEEEEECCCCCEEEE
Q psy15995        215 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ-----EHSRFVQAVRYSPSGSHFAS  289 (683)
Q Consensus       215 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~  289 (683)
                      ....-........-..++..+.++|.   .++....++.+.++++..++......     .-...+.+++|++.|..+++
T Consensus       111 ~~~~l~~~~~~~~~~~~~~~~~~~p~---~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~  187 (381)
T d1xipa_         111 DLEELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFA  187 (381)
T ss_dssp             ESSSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEEE
T ss_pred             EeeccccccccccccccccceecCCc---eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEEEEE
Confidence            44433333333444567888888876   37777778999999988876433221     12345777777777777766


Q ss_pred             EcCCCcEEEE-eCCCCeeEEeccC-CccccCeEEEEEccCCCEEEEEE
Q psy15995        290 AGFDGKVFLY-DGASADLVSELGN-PAHKGGVYAVAWKPDGTQLLTAS  335 (683)
Q Consensus       290 ~~~dg~i~iw-~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~  335 (683)
                      +..+ ...+- ++....   .+.. +.....+.++.|..+..++++-+
T Consensus       188 ~~g~-~~q~k~~i~~~~---~~~~p~~~~~~v~sI~WL~~~~F~vvy~  231 (381)
T d1xipa_         188 WRNG-EMEKQFEFSLPS---ELEELPVEEYSPLSVTILSPQDFLAVFG  231 (381)
T ss_dssp             EETT-EEEEEEEECCCH---HHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred             eCCC-ceeeccCCCCcc---ccCCCcCCCcceeEEEEecCceEEEEEC
Confidence            6322 11111 111111   1111 01344688999987666555543

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=94.62  E-value=1.3  Score=38.81  Aligned_cols=199  Identities=6%  Similarity=0.124  Sum_probs=114.8

Q ss_pred             cceEEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEc------CCCCeEEEEecCC--ceEEEEEEccC-CCce
Q psy15995        152 IGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWS------PDNQRMVVVGEGR--ERFGHVFMSET-GTSV  222 (683)
Q Consensus       152 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s------~~~~~l~~~~~~~--~~~~~~~~~~~-~~~~  222 (683)
                      +..+++.....+-|.+||++ |+.+....    .+.+..+..-      .+...+++++...  ...+.+|..+. ...+
T Consensus        39 ~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~----~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l  113 (353)
T d1h6la_          39 QNSKLITTNKKSGLAVYSLE-GKMLHSYH----TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL  113 (353)
T ss_dssp             GGCEEEEEETTSCCEEEETT-CCEEEECC----SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEE
T ss_pred             CccEEEEEcCcCCEEEEcCC-CcEEEecc----cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccc
Confidence            44566666667779999996 55544332    2555555433      2333455665442  22345555542 2223


Q ss_pred             eeeec-------CCcCeEEEEe--ecC-CCeEEEEeeCCCeEEEEcCC---CC----ceeeeccccccCeEEEEECCCCC
Q psy15995        223 GEISG-------QSKPINSCDF--KPS-RPFRIITGSEDNTIAVFEGP---PF----KFKMTKQEHSRFVQAVRYSPSGS  285 (683)
Q Consensus       223 ~~~~~-------~~~~v~~~~~--~~~-~~~~l~~~~~d~~i~iw~~~---~~----~~~~~~~~~~~~v~~~~~~~~~~  285 (683)
                      ..+..       ....+..+++  ++. +...++....+|.+..|.+.   .+    +.++.+. -...+..+.+.+...
T Consensus       114 ~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-~~~q~EGCVvDde~~  192 (353)
T d1h6la_         114 QSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-MNSQTEGMAADDEYG  192 (353)
T ss_dssp             EECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-CSSCEEEEEEETTTT
T ss_pred             ccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-CCCccceEEEeCCCC
Confidence            32222       1224666766  554 44557777888999888652   22    2233333 345688899999988


Q ss_pred             EEEEEcCCCcEEEEeCC-----CCeeEEeccCCccccCeEEEEEcc--CCC-EE-EEEECCCcEEEEECCCC-ceeeEEE
Q psy15995        286 HFASAGFDGKVFLYDGA-----SADLVSELGNPAHKGGVYAVAWKP--DGT-QL-LTASGDKTCKLWDIETK-SVVSEFI  355 (683)
Q Consensus       286 ~l~~~~~dg~i~iw~~~-----~~~~~~~~~~~~~~~~i~~~~~~~--~~~-~l-~~~~~dg~i~iwd~~~~-~~~~~~~  355 (683)
                      .|+.+-++..++.++..     .+..+...........+..|+...  +++ +| ++.-.+++..+||.... +.+..|.
T Consensus       193 ~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~~~~~g~F~  272 (353)
T d1h6la_         193 SLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQNKYVADFQ  272 (353)
T ss_dssp             EEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred             cEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCCccccceEE
Confidence            99999887777666653     223333332222456778887653  333 44 44445788999998864 5565654


Q ss_pred             e
Q psy15995        356 M  356 (683)
Q Consensus       356 ~  356 (683)
                      .
T Consensus       273 i  273 (353)
T d1h6la_         273 I  273 (353)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=94.45  E-value=1.5  Score=38.61  Aligned_cols=190  Identities=19%  Similarity=0.160  Sum_probs=100.2

Q ss_pred             eeeeEeeccceEEEeecC------------CccEEEEeccccceee-ecccccc-----CCCeeEEEE--cCCCCe-EEE
Q psy15995        144 IRNILVLSIGFYIASGDI------------SGKVRIWDTVNKEHIL-KNEFHPI-----GGPIKDIAW--SPDNQR-MVV  202 (683)
Q Consensus       144 i~~~~~s~~~~~l~~~~~------------d~~i~iwd~~~~~~~~-~~~~~~~-----~~~i~~~~~--s~~~~~-l~~  202 (683)
                      ...|+..|+|..+++++.            .|.|.++|+.+.+... .......     .-....+.+  .++++. |++
T Consensus        37 ~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~v  116 (340)
T d1v04a_          37 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV  116 (340)
T ss_dssp             CCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred             cceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEE
Confidence            446778888887766532            4889999987654321 1111110     112233433  456664 444


Q ss_pred             Eec-CCceEEEEEEccCCCc-ee---eee-cCCcCeEEEEeecCCCeEEEEeeC---------------CCeEEEEcCCC
Q psy15995        203 VGE-GRERFGHVFMSETGTS-VG---EIS-GQSKPINSCDFKPSRPFRIITGSE---------------DNTIAVFEGPP  261 (683)
Q Consensus       203 ~~~-~~~~~~~~~~~~~~~~-~~---~~~-~~~~~v~~~~~~~~~~~~l~~~~~---------------d~~i~iw~~~~  261 (683)
                      +.. .....+.++..+.... +.   ++. ......+.+.+..++.+ ++|-..               -+...+|....
T Consensus       117 vnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~f-y~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~  195 (340)
T d1v04a_         117 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHF-YATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP  195 (340)
T ss_dssp             EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEE-EEEESCSCCSHHHHHHHHHTTCCCEEEEEECS
T ss_pred             EeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCE-EEecCccCcChhhhhhhHhhcCCceeEEEEcC
Confidence            443 2333466666654332 11   111 22345789999888874 555211               12233333333


Q ss_pred             CceeeeccccccCeEEEEECCCCCEEEEE-cCCCcEEEEeCCCCeeEEeccCCccccCeEEEEEccCCCEEEEEE
Q psy15995        262 FKFKMTKQEHSRFVQAVRYSPSGSHFASA-GFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS  335 (683)
Q Consensus       262 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  335 (683)
                      ++..... ..-...+.++++||+++|+++ +..++|+.|++.............-....-.+.+.+++..+.+++
T Consensus       196 ~~~~~~~-~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         196 NDVRVVA-EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             SCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred             CceEEEc-CCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence            3332222 234567899999999866554 557889999886543222211111234456677776443344443

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.24  E-value=2.6  Score=37.35  Aligned_cols=180  Identities=6%  Similarity=-0.021  Sum_probs=97.4

Q ss_pred             cCCCeEEEeeCCCCCeEEEecCCeEEEEeCCCC---------cccccccCcccceEEEEECCCCcEEEEecCCCCEEEEe
Q psy15995         43 QRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENP---------AISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWD  113 (683)
Q Consensus        43 ~~~~~~~~~~s~~~~~l~~~~~~~i~v~~~~~~---------~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd  113 (683)
                      +..+...+++++...+++++....++|...+.-         ......+..-..|..++|+-|  .|+.. .++.+..++
T Consensus        35 P~~~~~LLAVsn~~GLl~aa~~~~l~V~~t~~l~~~~~~~~~~~~~~~~~~ip~v~~vafs~d--~l~v~-~~~~l~~~~  111 (381)
T d1xipa_          35 PFASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGD--QVLVS-TRNALYSLD  111 (381)
T ss_dssp             CSSCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEEETT--EEEEE-ESSEEEEEE
T ss_pred             CccccceEEEeCCCCEEEEECCCEEEEEEHHHHHHHhhccCCCCcceeccCCCCeEEEEeeCC--EEEEE-eCCCEEEEE
Confidence            345667888999989999888778888764321         000011111235889999765  45544 344577777


Q ss_pred             CCCcccccccccccCCCCcccceeeeeecceeeeEeeccceEEEeecCCccEEEEeccccceeeec---cccccCCCeeE
Q psy15995        114 TVNKEHILKNEFHPIGGPIKDIGTLLSLTSIRNILVLSIGFYIASGDISGKVRIWDTVNKEHILKN---EFHPIGGPIKD  190 (683)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~i~~  190 (683)
                      ...-..........              ..+..+...|.  .++....++.+.++++.+++.....   .-..-.+.+.+
T Consensus       112 ~~~l~~~~~~~~~~--------------~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~  175 (381)
T d1xipa_         112 LEELSEFRTVTSFE--------------KPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLA  175 (381)
T ss_dssp             SSSTTCEEEEEECS--------------SCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEE
T ss_pred             eecccccccccccc--------------ccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceE
Confidence            66543221111110              33455555554  4555666788888988877532111   00112366788


Q ss_pred             EEEcCCCCeEEEEecCCceEEEEEEccCCCceeeeecCCcCeEEEEeecCCCe
Q psy15995        191 IAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPF  243 (683)
Q Consensus       191 ~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  243 (683)
                      ++|++.|+.+++..++. ....- .......+.........|.++.|..+..+
T Consensus       176 v~ws~kgkq~v~~~g~~-~q~k~-~i~~~~~~~~p~~~~~~v~sI~WL~~~~F  226 (381)
T d1xipa_         176 VLLKDRSFQSFAWRNGE-MEKQF-EFSLPSELEELPVEEYSPLSVTILSPQDF  226 (381)
T ss_dssp             EEETTSCEEEEEEETTE-EEEEE-EECCCHHHHTSCTTTSEEEEEEESSSSEE
T ss_pred             EEEeCCcEEEEEeCCCc-eeecc-CCCCccccCCCcCCCcceeEEEEecCceE
Confidence            88888888777653331 10111 11111111111223456788888877764

>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: beta-lactamase inhibitor protein-II, BLIP-II
domain: beta-lactamase inhibitor protein-II, BLIP-II
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=92.74  E-value=2.4  Score=35.74  Aligned_cols=238  Identities=9%  Similarity=-0.014  Sum_probs=120.7

Q ss_pred             cEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEec
Q psy15995        425 FITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVK  504 (683)
Q Consensus       425 ~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (683)
                      +|+.|--.........+......|..++......+... ||.|..|-...................+.....+.......
T Consensus         5 sv~~WG~~~~~~~~~~~~~~~~~i~~va~G~~h~~al~-dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~G~~~~~al~dg   83 (273)
T d1jtdb_           5 SVVAWGGNNDWGEATVPAEAQSGVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALKDG   83 (273)
T ss_dssp             EEEEESSCCSSSTTCCCGGGSSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSCCCEEEECSSEEEEEETT
T ss_pred             EEEEECCCCCCCceeccccCCCCcEEEEccCCEEEEEE-CCEEEEEeCCCCCceeeeecccccceEEecCCCceeeeeee
Confidence            46667533222112222233456777777655555554 89999998777655444434444444455444444444555


Q ss_pred             eEEEEeCCce---eeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcceeecCCcCeeEEEECCCCCEEEE
Q psy15995        505 QISIVENGAK---VSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKAELDHLGPVTDCSFSPSNEYLVA  581 (683)
Q Consensus       505 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~  581 (683)
                      .+..+.....   .........+..++...... .+  ..|+.+..|.......... .......|..++-.  ...+ .
T Consensus        84 ~v~~wG~~~~gq~~~~~~~~~~~~~i~~~~~~~-~~--~~dg~v~~~g~~~~~~~~~-~~~~~~~v~~~~~~--~~~~-~  156 (273)
T d1jtdb_          84 EVIAWGGNEDGQTTVPAEARSGVDAIAAGAWAS-YA--LKDGKVIAWGDDSDGQTTV-PAEAQSGVTALDGG--VYTA-L  156 (273)
T ss_dssp             EEEEEECCTTSTTCCCGGGGSSCCEEEEETTEE-EE--EETTEEEEEECCTTSTTSC-CGGGGSSEEEEEEC--SSEE-E
T ss_pred             eeeccCCCcceeeccccccccceeEEeeecccc-cc--cccccceecccCCCCceee-eccCCceEEEEecc--ceee-e
Confidence            5555543211   11111223344444433322 22  2478888887544332211 11223345544432  2223 3


Q ss_pred             EeCCCeEEEEECCCCccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeCCCCceeeEeecCCCCCCeeEEEEc
Q psy15995        582 SDAHRKVVLYRVPDFELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSLASPAKHIIIKNAHPQSQITRLQWL  661 (683)
Q Consensus       582 ~~~d~~i~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~l~~~  661 (683)
                      ...++.++.|-............  ....|..++....  ..+.- .||.|+-|=......+.....  ....|..|+-.
T Consensus       157 ~~~~g~~~~~G~~~~g~~~~~~~--~~~~v~~Is~G~~--h~~~l-~dG~v~~WG~n~~Gql~~~~~--~~~~v~~I~~G  229 (273)
T d1jtdb_         157 AVKNGGVIAWGDNYFGQTTVPAE--AQSGVDDVAGGIF--HSLAL-KDGKVIAWGDNRYKQTTVPTE--ALSGVSAIASG  229 (273)
T ss_dssp             EEETTEEEEEECCTTSTTSCCGG--GSSSEEEEEECSS--EEEEE-ETTEEEEEECCTTSTTCCCGG--GGSSCCEEEEC
T ss_pred             eecccceeEeecccCCccccccc--ccCCccceeccce--eeEEE-ecCcEEEcCCCCCCccCCCcc--CCCCcEEEEeC
Confidence            34578888887654332221111  4456777766433  32222 389999997654333322211  13467777755


Q ss_pred             cCCeEEEeeCCCcEEEEe
Q psy15995        662 DNDLLVSVGQDCNTKIWE  679 (683)
Q Consensus       662 ~~~~l~s~~~d~~v~vw~  679 (683)
                      +...++.  .||.|..|-
T Consensus       230 ~~~~~~l--~~g~v~~WG  245 (273)
T d1jtdb_         230 EWYSLAL--KNGKVIAWG  245 (273)
T ss_dssp             SSCEEEE--ETTEEEEES
T ss_pred             cceEEEE--ECCEEEEEC
Confidence            5555444  389999994

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=92.17  E-value=4.3  Score=37.21  Aligned_cols=52  Identities=13%  Similarity=0.220  Sum_probs=39.0

Q ss_pred             CCeEEEeeCCCCCeEEEec-CCeEEEEeCCCCccccc--c------cCcccceEEEEECCC
Q psy15995         45 GQPIVLGGDPKGKNFLYTN-GNSVIIRNIENPAISDI--Y------TEHSCAVNVAKYSPS   96 (683)
Q Consensus        45 ~~~~~~~~s~~~~~l~~~~-~~~i~v~~~~~~~~~~~--~------~~h~~~v~~~~~s~d   96 (683)
                      ..+..|+|.|||+++++.. .|.|.+++.++++....  +      ..-.+....|+|.|+
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            4788999999999999985 68999999887754221  1      122356788999985

>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: beta-lactamase inhibitor protein-II, BLIP-II
domain: beta-lactamase inhibitor protein-II, BLIP-II
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=91.93  E-value=3.1  Score=35.06  Aligned_cols=220  Identities=10%  Similarity=0.010  Sum_probs=108.8

Q ss_pred             cccEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCCcceeccCCCCcceeEEEEeCCeEEEEEcCCeEEEEeCCCCcccCCc
Q psy15995        402 NKPITALALSPDRGTVFTGSHDGFITRWNAKTGENDRVQGAGHGNQINGMKATGELLYTCGIDDTIKQVDLSSNAYSGPE  481 (683)
Q Consensus       402 ~~~v~~~~~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~  481 (683)
                      ...|..++...  .+.+.-. ||.|..|-......+-.. ......+..+.......+.- .|+.+..|...........
T Consensus        25 ~~~i~~va~G~--~h~~al~-dG~v~~wG~N~~GQlG~~-~~~~~~v~~v~~G~~~~~al-~dg~v~~wG~~~~gq~~~~   99 (273)
T d1jtdb_          25 QSGVDAIAGGY--FHGLALK-GGKVLGWGANLNGQLTMP-AATQSGVDAIAAGNYHSLAL-KDGEVIAWGGNEDGQTTVP   99 (273)
T ss_dssp             SSSEEEEEECS--SEEEEEE-TTEEEEEECCTTSTTSCC-GGGGSCCCEEEECSSEEEEE-ETTEEEEEECCTTSTTCCC
T ss_pred             CCCcEEEEccC--CEEEEEE-CCEEEEEeCCCCCceeee-ecccccceEEecCCCceeee-eeeeeeccCCCcceeeccc
Confidence            45677776532  3333344 899999976554332221 22334566666554444333 5899999987654433322


Q ss_pred             eecCCCCceeeecCCeEEEEEeceEEEEeCCceee---eecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcc
Q psy15995        482 VKLGSQPRGLDIDENTLVTVTVKQISIVENGAKVS---SLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPK  558 (683)
Q Consensus       482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~  558 (683)
                      ........................+..+.......   ..+....+..++  .....++ ...++.++.|-........ 
T Consensus       100 ~~~~~~~~~i~~~~~~~~~~~dg~v~~~g~~~~~~~~~~~~~~~~v~~~~--~~~~~~~-~~~~g~~~~~G~~~~g~~~-  175 (273)
T d1jtdb_         100 AEARSGVDAIAAGAWASYALKDGKVIAWGDDSDGQTTVPAEAQSGVTALD--GGVYTAL-AVKNGGVIAWGDNYFGQTT-  175 (273)
T ss_dssp             GGGGSSCCEEEEETTEEEEEETTEEEEEECCTTSTTSCCGGGGSSEEEEE--ECSSEEE-EEETTEEEEEECCTTSTTS-
T ss_pred             cccccceeEEeeecccccccccccceecccCCCCceeeeccCCceEEEEe--ccceeee-eecccceeEeecccCCccc-
Confidence            22233333444444444444444444443222111   111112222222  2222222 3346788888765433221 


Q ss_pred             eeecCCcCeeEEEECCCCCEEEEEeCCCeEEEEECCC-CccccccceeeecccEEEEEecCCCCeEEEeecCCcEEEEeC
Q psy15995        559 AELDHLGPVTDCSFSPSNEYLVASDAHRKVVLYRVPD-FELAHNKEWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSL  637 (683)
Q Consensus       559 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~-~~~~~~~~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~  637 (683)
                      ........|..++....  +.+.- .||.|+-|=... +++-....   ....|..++-... ..++.  .||.|+.|--
T Consensus       176 ~~~~~~~~v~~Is~G~~--h~~~l-~dG~v~~WG~n~~Gql~~~~~---~~~~v~~I~~G~~-~~~~l--~~g~v~~WG~  246 (273)
T d1jtdb_         176 VPAEAQSGVDDVAGGIF--HSLAL-KDGKVIAWGDNRYKQTTVPTE---ALSGVSAIASGEW-YSLAL--KNGKVIAWGS  246 (273)
T ss_dssp             CCGGGSSSEEEEEECSS--EEEEE-ETTEEEEEECCTTSTTCCCGG---GGSSCCEEEECSS-CEEEE--ETTEEEEEST
T ss_pred             ccccccCCccceeccce--eeEEE-ecCcEEEcCCCCCCccCCCcc---CCCCcEEEEeCcc-eEEEE--ECCEEEEECC
Confidence            22234556777776533  22222 379999997643 22221111   2345777765433 23433  4899999964


Q ss_pred             CC
Q psy15995        638 AS  639 (683)
Q Consensus       638 ~~  639 (683)
                      ..
T Consensus       247 ~~  248 (273)
T d1jtdb_         247 SR  248 (273)
T ss_dssp             TC
T ss_pred             CC
Confidence            43

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.51  E-value=4.4  Score=34.21  Aligned_cols=104  Identities=14%  Similarity=0.161  Sum_probs=51.6

Q ss_pred             EEEEeeCC-----CeEEEEcCCCCceeeecccccc-CeEEEEECCCCCEEEEEcCC-----CcEEEEeCCCCeeEEeccC
Q psy15995        244 RIITGSED-----NTIAVFEGPPFKFKMTKQEHSR-FVQAVRYSPSGSHFASAGFD-----GKVFLYDGASADLVSELGN  312 (683)
Q Consensus       244 ~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~  312 (683)
                      .++.|+.+     ..+..||..+.+....-..... .-.+... .+++.++.++.+     .....+|..+.+....-..
T Consensus       151 ~~~~GG~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (288)
T d1zgka1         151 LYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM  229 (288)
T ss_dssp             EEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC
T ss_pred             ceEecCcccccccceEEEeeccccccccccccccccccccccc-eeeeEEEecCccccccccceeeeeecceeeecccCc
Confidence            35555443     3467777666544332211111 1112222 234455555443     3567788777665543322


Q ss_pred             CccccCeEEEEEccCCCEEEEEECCCc-----EEEEECCCCce
Q psy15995        313 PAHKGGVYAVAWKPDGTQLLTASGDKT-----CKLWDIETKSV  350 (683)
Q Consensus       313 ~~~~~~i~~~~~~~~~~~l~~~~~dg~-----i~iwd~~~~~~  350 (683)
                      +...... +++. .+++.++.|+.++.     +.+||+++++-
T Consensus       230 p~~r~~~-~~~~-~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W  270 (288)
T d1zgka1         230 KHRRSAL-GITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTW  270 (288)
T ss_dssp             SSCCBSC-EEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred             cCcccce-EEEE-ECCEEEEEecCCCCeecceEEEEECCCCEE
Confidence            2111112 2222 36777777765443     78899987653

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=89.83  E-value=7.2  Score=35.63  Aligned_cols=34  Identities=9%  Similarity=0.060  Sum_probs=27.7

Q ss_pred             cceEEEEECCCCcEEEEecCCCCEEEEeCCCccc
Q psy15995         86 CAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH  119 (683)
Q Consensus        86 ~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~  119 (683)
                      ...++|+|.|||+++++--.+|+|++++..+++.
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~   60 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSV   60 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcE
Confidence            4567999999999988875679999998777643

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.21  E-value=5.6  Score=33.51  Aligned_cols=63  Identities=17%  Similarity=0.292  Sum_probs=32.3

Q ss_pred             EEEEeeCC-----CeEEEEcCCCCceeeeccccccCe-EEEEECCCCCEEEEEcCCC-----cEEEEeCCCCeeE
Q psy15995        244 RIITGSED-----NTIAVFEGPPFKFKMTKQEHSRFV-QAVRYSPSGSHFASAGFDG-----KVFLYDGASADLV  307 (683)
Q Consensus       244 ~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~~~~  307 (683)
                      +++.++.+     .....+|..+.+....-....... .+++ ..+++.++.|+.++     .+.+||+.+.+..
T Consensus       198 i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~  271 (288)
T d1zgka1         198 IYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGIT-VHQGRIYVLGGYDGHTFLDSVECYDPDTDTWS  271 (288)
T ss_dssp             EEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred             EEEecCccccccccceeeeeecceeeecccCccCcccceEEE-EECCEEEEEecCCCCeecceEEEEECCCCEEE
Confidence            35555443     345666766555433221111111 1222 23677777776544     3788898876543

>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: GyrA/ParC C-terminal domain-like
family: GyrA/ParC C-terminal domain-like
domain: Topoisomerase IV subunit A, ParC, C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.17  E-value=14  Score=31.63  Aligned_cols=239  Identities=10%  Similarity=0.062  Sum_probs=130.0

Q ss_pred             ecCCEEEEEecCCcEEEEecCCC---CcceeeeeeccccEEEEEEeCCCCEEEEEeCCCcEE---EEcCCCCC------c
Q psy15995        369 WQGDYLLTVSLSGFISYLDVNNP---STPIRVIKGHNKPITALALSPDRGTVFTGSHDGFIT---RWNAKTGE------N  436 (683)
Q Consensus       369 ~~~~~l~~~~~~g~i~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~---~w~~~~~~------~  436 (683)
                      ++.+.+++.+.+|.|+-..+...   ...-..++ ..+.+..+........|+.-+..|.++   +|++..+.      +
T Consensus         3 ~~E~v~v~lS~~GyiKR~~~~~~~~~~~~~~~~k-~~D~v~~~~~~~t~d~ll~fT~~Grvy~l~v~eiP~~~~~s~G~p   81 (323)
T d1wp5a_           3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK-DTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH   81 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC-TTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred             CCCCEEEEEeCCCeEEEeeHHHhhhcCCCCCccc-CCceEEEEEEEcCCCEEEEEecCCEEEEEeeccCccccccccccc
Confidence            35567788889999887665320   00001112 233455554444555566566777654   45555332      2


Q ss_pred             ceec-cCCCCcceeEEEEe-----CCeEEEEEcCCeEEEEeCCCCcccCCceecCCCCceeeecCCeEEEEEeceEEEEe
Q psy15995        437 DRVQ-GAGHGNQINGMKAT-----GELLYTCGIDDTIKQVDLSSNAYSGPEVKLGSQPRGLDIDENTLVTVTVKQISIVE  510 (683)
Q Consensus       437 ~~~~-~~~~~~~v~~~~~~-----~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (683)
                      +... .......+..+...     ..+++..+..|.++...+........                             .
T Consensus        82 i~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~-----------------------------~  132 (323)
T d1wp5a_          82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY-----------------------------S  132 (323)
T ss_dssp             GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC-----------------------------S
T ss_pred             ceeeecccCCcceEEEeeccccccceeEEEEeehhheeeccHHHhhhhhc-----------------------------c
Confidence            2211 12234444444332     56899999999999988764321000                             0


Q ss_pred             CCceeeeecCCCCCcEEEEccCCCEEEEEcCCCcEEEEEcCCCccCcce-------eecCCcCeeEE-EECCCCCEEEEE
Q psy15995        511 NGAKVSSLPIDYEPSSISLDHEHGLVAVGGADSKVHIYELNNKSLSPKA-------ELDHLGPVTDC-SFSPSNEYLVAS  582 (683)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~~~~~~~v~~~-~~s~~~~~l~~~  582 (683)
                      .+.....+.....+..+.+..+...++.++..|.+..|+...-....+.       .+...+.+.+. ...+++..|+..
T Consensus       133 ~g~~~i~L~~~D~l~~v~~~~~~~~i~l~t~~G~~lrf~~~~vr~~gr~a~GV~~ikL~~~D~vv~~~~~~~~~~~ll~~  212 (323)
T d1wp5a_         133 KPLTGINLKNDDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVA  212 (323)
T ss_dssp             SCEECSCCCTTCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEE
T ss_pred             chhhhccccccccccceeccCCCeEEEEEEecceeeEeecccccccCcccccccccccccccccchhhhccccccceeee
Confidence            0111122233344556666667778888899999999987654333221       12234455544 455677888889


Q ss_pred             eCCCeEEEEECCCCccccc-------c-ceeeecccEEEEEecCCCCeEEEeecCCcEEEEeC
Q psy15995        583 DAHRKVVLYRVPDFELAHN-------K-EWGFHSAKVNCVAWSPDSALVASGSLDTTIIIWSL  637 (683)
Q Consensus       583 ~~d~~i~i~~~~~~~~~~~-------~-~~~~h~~~v~~~~~s~d~~~l~~~~~d~~v~iw~~  637 (683)
                      +..|..+.-.+...+....       . ........+..+....+...|+..+..|.+.-.++
T Consensus       213 T~~G~gKr~~~~e~~~~~RggkGv~~~k~~k~~~~~v~~~~~~~~~d~l~l~T~~g~~~r~~~  275 (323)
T d1wp5a_         213 TQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKV  275 (323)
T ss_dssp             ETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEG
T ss_pred             eeeheeecccchhhccccccccccccccccccccceeeeeEecCCCCEEEEEeCCCEEEEEEh
Confidence            9999988877654332111       0 11001233555555555556666666776554444

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=81.15  E-value=11  Score=29.55  Aligned_cols=234  Identities=12%  Similarity=0.085  Sum_probs=121.8

Q ss_pred             CCeEEEe-cCCeEEEEeCCCCcccccccCcccceEEEEECCCCcEEEEecCCCCEEEEeCCCcccccccccccCCCCccc
Q psy15995         56 GKNFLYT-NGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKD  134 (683)
Q Consensus        56 ~~~l~~~-~~~~i~v~~~~~~~~~~~~~~h~~~v~~~~~s~d~~~las~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  134 (683)
                      .++++++ +.|.+.++-+..++.++.   ...+|.....-..       +-|..+.+-|+..|+....+-.-....+- .
T Consensus        26 d~ll~~~~seG~vni~~l~g~~~vkL---tkePI~~~~~Pk~-------~ldfi~f~RDV~kGkE~Hai~~~Nlk~~G-E   94 (313)
T d2hu7a1          26 DKLLVVGFSEGSVNAYLYDGGETVKL---NREPINSVLDPHY-------GVGRVILVRDVSKGAEQHALFKVNTSRPG-E   94 (313)
T ss_dssp             TEEEEEEEETTEEEEEEESSSSCEEC---CSSCCSEECEECT-------TBSEEEEEEECSTTSCCEEEEEEETTSTT-C
T ss_pred             CcEEEEEeccceEEEEEEeCCEEEEE---ecccccCcCCCcc-------CcceEEEEeehhcCcceeeEEEEccCCCC-e
Confidence            3455555 788999998888877653   2334432221111       11222333344444333222111100000 0


Q ss_pred             ceeeeeecceeeeEeeccce-EEEeecCCccEEEEeccccceeeeccccccCCCeeEEEEcCCCCeEEEEecCCceEEEE
Q psy15995        135 IGTLLSLTSIRNILVLSIGF-YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHV  213 (683)
Q Consensus       135 ~~~~~~~~~i~~~~~s~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~~~~~~~  213 (683)
                      ...+....+++-+...-|++ ...+|+......+|-++.|+.......++. +-|+++    .+++++-.+--......+
T Consensus        95 E~~i~spk~vRI~S~~yddk~vvF~Gased~~~LYviegGklrkL~~vPpF-sFVtDI----~~d~I~G~g~~~g~~~sf  169 (313)
T d2hu7a1          95 EQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGF-GFVSDI----RGDLIAGLGFFGGGRVSL  169 (313)
T ss_dssp             EEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSC-EEEEEE----ETTEEEEEEEEETTEEEE
T ss_pred             eeEecCCceEEEEEeeecCceEEEecccCCceEEEEEeCCceeeeccCCCc-ceEEec----cCCeEEEEeeecCCcceE
Confidence            00011112234444444444 556777778889999988875444443332 233333    355555443211111223


Q ss_pred             EEccC-CCceeeeecCCcCeEEEEeecCCCeEEEEeeC----CCeEEEEcCCCCceeeec-c------ccccCeEEEEEC
Q psy15995        214 FMSET-GTSVGEISGQSKPINSCDFKPSRPFRIITGSE----DNTIAVFEGPPFKFKMTK-Q------EHSRFVQAVRYS  281 (683)
Q Consensus       214 ~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----d~~i~iw~~~~~~~~~~~-~------~~~~~v~~~~~~  281 (683)
                      +..+- ...+..+....+.++.....+..+  ++++-+    ..-| -+|.++++....- .      -....|+-+-+.
T Consensus       170 F~adl~SG~lri~tpkeGS~~~ay~~~gnK--V~sdyEt~gEsywi-t~D~~s~~yerve~P~kd~~sy~p~~I~~~~Y~  246 (313)
T d2hu7a1         170 FTSNLSSGGLRVFDSGEGSFSSASISPGMK--VTAGLETAREARLV-TVDPRDGSVEDLELPSKDFSSYRPTAITWLGYL  246 (313)
T ss_dssp             EEEETTTEEEEEECCSSEEEEEEEECTTSC--EEEEEEESSCEEEE-EECTTTCCEEECCCSSCHHHHHCCSEEEEEEEC
T ss_pred             EEEecccCCEEEecCCCCcccceeEccCce--eeeccCCCCceEEE-EEecccCceeeeecCcccceeecceEEEeeeeC
Confidence            33332 334566777777888888888775  444432    2223 4476665543321 1      123457777899


Q ss_pred             CCCCEEEEEcCCCcEEEEeCCCCeeEEec
Q psy15995        282 PSGSHFASAGFDGKVFLYDGASADLVSEL  310 (683)
Q Consensus       282 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~  310 (683)
                      |++++++.+-.||.-+++.  +|+.+...
T Consensus       247 Pdd~L~iiakrdG~s~lF~--nGk~in~p  273 (313)
T d2hu7a1         247 PDGRLAVVARREGRSAVFI--DGERVEAP  273 (313)
T ss_dssp             TTSCEEEEEEETTEEEEEE--TTEEECCC
T ss_pred             CCCcEEEEEecCCchheee--cceEecCC
Confidence            9999989999999999997  67766553