Psyllid ID: psy16223
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 153 | 2.2.26 [Sep-21-2011] | |||||||
| Q8K354 | 277 | Carbonyl reductase [NADPH | yes | N/A | 0.921 | 0.509 | 0.390 | 4e-23 | |
| Q28960 | 289 | Carbonyl reductase [NADPH | no | N/A | 0.875 | 0.463 | 0.381 | 9e-22 | |
| P48758 | 277 | Carbonyl reductase [NADPH | no | N/A | 0.875 | 0.483 | 0.388 | 9e-22 | |
| P16152 | 277 | Carbonyl reductase [NADPH | yes | N/A | 0.901 | 0.498 | 0.377 | 3e-21 | |
| Q5RCU5 | 277 | Carbonyl reductase [NADPH | yes | N/A | 0.901 | 0.498 | 0.377 | 4e-21 | |
| P47844 | 277 | Carbonyl reductase [NADPH | no | N/A | 0.895 | 0.494 | 0.371 | 4e-21 | |
| Q8MI29 | 277 | Carbonyl reductase [NADPH | N/A | N/A | 0.908 | 0.501 | 0.366 | 5e-21 | |
| Q3SZD7 | 277 | Carbonyl reductase [NADPH | no | N/A | 0.908 | 0.501 | 0.387 | 4e-20 | |
| O75828 | 277 | Carbonyl reductase [NADPH | no | N/A | 0.888 | 0.490 | 0.352 | 1e-18 | |
| P47727 | 277 | Carbonyl reductase [NADPH | no | N/A | 0.882 | 0.487 | 0.376 | 4e-18 |
| >sp|Q8K354|CBR3_MOUSE Carbonyl reductase [NADPH] 3 OS=Mus musculus GN=Cbr3 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNL--ELKKRLME 65
PF IQAE T+ TN+ C L P+++ H RVVN+SS G L + N +L+++
Sbjct: 102 PFDIQAEVTLKTNFFATRNVCTELLPIMKPHGRVVNISSLQG-LKALENCREDLQEKFRC 160
Query: 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGN 125
D ++E L D+M +F++ TK H +GWPDSAY VSK+GV +LTRI ++ D +
Sbjct: 161 DTLTEVDLVDLMKKFVEDTKNE--VHEREGWPDSAYGVSKLGVTVLTRILARQLDEKRKA 218
Query: 126 QDKVINAVHPGYVATNMSSFMGNVNI 151
++NA PG+V T+M+ G+ +
Sbjct: 219 DRILLNACCPGWVKTDMARDQGSRTV 244
|
Has low NADPH-dependent oxidoreductase activity towards 4-benzoylpyridine and menadione (in vitro). Mus musculus (taxid: 10090) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 8EC: 4 |
| >sp|Q28960|CBR1_PIG Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 85/139 (61%), Gaps = 5/139 (3%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG--HLSQITNLELKKRLME 65
PF IQAE T+ TN++G C L PL++ RVVN+SS+ G L++ + EL+++
Sbjct: 102 PFHIQAELTMKTNFMGTRNVCTELLPLIKPQGRVVNVSSTEGVRALNECSP-ELQQKFKS 160
Query: 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGN 125
+ ++E +L +M +F++ TK H +GW DS Y V+KIGV++L+RIY +K +
Sbjct: 161 ETITEEELVGLMNKFVEDTKNG--VHRKEGWSDSTYGVTKIGVSVLSRIYARKLREQRAG 218
Query: 126 QDKVINAVHPGYVATNMSS 144
++NA PG+V T+M
Sbjct: 219 DKILLNACCPGWVRTDMGG 237
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
| >sp|P48758|CBR1_MOUSE Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 85/139 (61%), Gaps = 5/139 (3%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITN--LELKKRLME 65
PF IQAE T+ TN+ G C L PL++ RVVN+SS L + N LEL+++
Sbjct: 102 PFHIQAEVTMKTNFFGTRDVCKELLPLIKPQGRVVNVSSMV-SLRALKNCRLELQQKFRS 160
Query: 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGN 125
+ ++E +L +M +F++ TK+ H +GWP+SAY V+KIGV +L+RI +K + +
Sbjct: 161 ETITEEELVGLMNKFVEDTKKG--VHAEEGWPNSAYGVTKIGVTVLSRILARKLNEQRRG 218
Query: 126 QDKVINAVHPGYVATNMSS 144
++NA PG+V T+M+
Sbjct: 219 DKILLNACCPGWVRTDMAG 237
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
| >sp|P16152|CBR1_HUMAN Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 84/143 (58%), Gaps = 5/143 (3%)
Query: 4 ASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSS--SAGHLSQITNLELKK 61
A PF IQAE T+ TN+ G C L PL++ RVVN+SS S L + EL++
Sbjct: 98 ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSP-ELQQ 156
Query: 62 RLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC 121
+ + ++E +L +M +F++ TK+ H +GWP SAY V+KIGV +L+RI+ +K
Sbjct: 157 KFRSETITEEELVGLMNKFVEDTKKG--VHQKEGWPSSAYGVTKIGVTVLSRIHARKLSE 214
Query: 122 ELGNQDKVINAVHPGYVATNMSS 144
+ ++NA PG+V T+M+
Sbjct: 215 QRKGDKILLNACCPGWVRTDMAG 237
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
| >sp|Q5RCU5|CBR1_PONAB Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 84/143 (58%), Gaps = 5/143 (3%)
Query: 4 ASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSS--SAGHLSQITNLELKK 61
A PF IQAE T+ TN+ G C L PL++ RVVN+SS S L + EL++
Sbjct: 98 ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSP-ELQQ 156
Query: 62 RLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC 121
+ + ++E +L +M +F++ TK+ H +GWP SAY V+KIGV +L+RI+ +K
Sbjct: 157 KFRSETITEEELVGLMNKFVEDTKKG--VHQKEGWPSSAYGVTKIGVTVLSRIHARKLSE 214
Query: 122 ELGNQDKVINAVHPGYVATNMSS 144
+ ++NA PG+V T+M+
Sbjct: 215 QRKGDRILLNACCPGWVRTDMAG 237
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
| >sp|P47844|CBR1_RABIT Carbonyl reductase [NADPH] 1 OS=Oryctolagus cuniculus GN=CBR1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Query: 6 TVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSS-SAGHLSQITNLELKKRLM 64
T PF IQAE T+ TN+ G C L PL+R RVVN+SS + + + EL+++
Sbjct: 100 TTPFHIQAEVTMKTNFDGTRDVCTELLPLMRPGGRVVNVSSMTCLRALKSCSPELQQKFR 159
Query: 65 EDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELG 124
+ ++E +L +M +F++ TK+ H +GWPD+AY V+K+GV +L+RI + G
Sbjct: 160 SETITEEELVGLMKKFVEDTKKG--VHQTEGWPDTAYGVTKMGVTVLSRIQARHLSEHRG 217
Query: 125 NQDKVINAVHPGYVATNMSS 144
++NA PG+V T+M
Sbjct: 218 GDKILVNACCPGWVRTDMGG 237
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Oryctolagus cuniculus (taxid: 9986) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
| >sp|Q8MI29|CBR1_MACFA Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 83/142 (58%), Gaps = 3/142 (2%)
Query: 4 ASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLS-QITNLELKKR 62
A PF IQAE T+ TN+ G C L PL++ RVVN+SS + + + EL+++
Sbjct: 98 ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNISSMMSLRALKSCSPELQQK 157
Query: 63 LMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCE 122
+ ++E +L +M +F + TK+ H +GWP SAY V+KIGV +L+RI+ +K +
Sbjct: 158 FRSETITEEELVGLMNKFAEDTKKG--VHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQ 215
Query: 123 LGNQDKVINAVHPGYVATNMSS 144
++NA PG+V T+M+
Sbjct: 216 RKGDKILLNACCPGWVRTDMAG 237
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Macaca fascicularis (taxid: 9541) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
| >sp|Q3SZD7|CBR1_BOVIN Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 85/142 (59%), Gaps = 3/142 (2%)
Query: 4 ASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLS-QITNLELKKR 62
A T PF IQAE T+ TN+ G C L PL++ RVVN+SS S + + EL+++
Sbjct: 98 ADTTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSFVSVNSLKKCSRELQQK 157
Query: 63 LMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCE 122
+ ++E +L +M +F++ TK H +GWPD+AY V+KIGV +L+RI+ +K +
Sbjct: 158 FRSETITEEELVGLMNKFVEDTKNG--VHRKEGWPDTAYGVTKIGVTVLSRIHARKLSEQ 215
Query: 123 LGNQDKVINAVHPGYVATNMSS 144
G ++NA PG+V T+M
Sbjct: 216 RGGDKILLNACCPGWVRTDMGG 237
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
| >sp|O75828|CBR3_HUMAN Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CBR3 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 7 VPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSS-SAGHLSQITNLELKKRLME 65
+PF I+AE T+ TN+ C L P+++ H RVVN+SS + + +L++R
Sbjct: 101 MPFDIKAEMTLKTNFFATRNMCNELLPIMKPHGRVVNISSLQCLRAFENCSEDLQERFHS 160
Query: 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGN 125
+ ++E L D+M +F++ TK H +GWP+S Y VSK+GV +L+RI ++ D +
Sbjct: 161 ETLTEGDLVDLMKKFVEDTKNE--VHEREGWPNSPYGVSKLGVTVLSRILARRLDEKRKA 218
Query: 126 QDKVINAVHPGYVATNMSS 144
++NA PG V T+M
Sbjct: 219 DRILVNACCPGPVKTDMDG 237
|
Has low NADPH-dependent oxidoreductase activity towards 4-benzoylpyridine and menadione (in vitro). Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|P47727|CBR1_RAT Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus GN=Cbr1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 85/138 (61%), Gaps = 3/138 (2%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLS-QITNLELKKRLMED 66
PF IQAE T+ TN+ G C L P+++ RVVN+SSS + + + EL+++ +
Sbjct: 102 PFHIQAEVTMKTNFFGTQDVCKELLPIIKPQGRVVNVSSSVSLRALKSCSPELQQKFRSE 161
Query: 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQ 126
++E +L +M +F++ K+ H +GWP+SAY V+KIGV +L+RIY +K + E
Sbjct: 162 TITEEELVGLMNKFIEDAKKG--VHAKEGWPNSAYGVTKIGVTVLSRIYARKLNEERRED 219
Query: 127 DKVINAVHPGYVATNMSS 144
++NA PG+V T+M+
Sbjct: 220 KILLNACCPGWVRTDMAG 237
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 153 | ||||||
| 340719469 | 276 | PREDICTED: carbonyl reductase [NADPH] 1- | 0.928 | 0.514 | 0.482 | 3e-33 | |
| 350410469 | 276 | PREDICTED: carbonyl reductase [NADPH] 1- | 0.928 | 0.514 | 0.475 | 5e-33 | |
| 307200580 | 274 | Carbonyl reductase [NADPH] 1 [Harpegnath | 0.941 | 0.525 | 0.496 | 1e-31 | |
| 380029301 | 271 | PREDICTED: carbonyl reductase [NADPH] 1- | 0.908 | 0.512 | 0.471 | 4e-31 | |
| 383863073 | 276 | PREDICTED: carbonyl reductase [NADPH] 1- | 0.934 | 0.518 | 0.445 | 4e-31 | |
| 91083531 | 282 | PREDICTED: similar to predicted protein | 0.901 | 0.489 | 0.485 | 2e-30 | |
| 332372658 | 282 | unknown [Dendroctonus ponderosae] | 0.928 | 0.503 | 0.465 | 1e-29 | |
| 307181669 | 267 | Carbonyl reductase [NADPH] 1 [Camponotus | 0.941 | 0.539 | 0.469 | 5e-29 | |
| 427787661 | 277 | Putative 20-hydroxysteroid dehydrogenase | 0.921 | 0.509 | 0.493 | 1e-28 | |
| 391341573 | 285 | PREDICTED: carbonyl reductase [NADPH] 1- | 0.928 | 0.498 | 0.468 | 3e-28 |
| >gi|340719469|ref|XP_003398176.1| PREDICTED: carbonyl reductase [NADPH] 1-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 103/145 (71%), Gaps = 3/145 (2%)
Query: 5 STVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLM 64
+T PF++QAE+T+ NY L + C L+PLL+ HARVV++SSSAGHLS+I LKKR
Sbjct: 96 ATEPFSLQAEETLRVNYFSLRKVCSKLYPLLKTHARVVHVSSSAGHLSKIPGETLKKRFS 155
Query: 65 EDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELG 124
+ ++E +L ++M+EF+D K + H+ KGW +SAY SK+GV+ L RI+Q+ F+ +
Sbjct: 156 DPNLTEEELDNIMHEFIDAAKTN--THLQKGWANSAYVASKVGVSALARIHQRMFNSDT- 212
Query: 125 NQDKVINAVHPGYVATNMSSFMGNV 149
+D V+NAVHPGYV T+M+S G +
Sbjct: 213 REDLVVNAVHPGYVDTDMTSHKGTL 237
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|350410469|ref|XP_003489050.1| PREDICTED: carbonyl reductase [NADPH] 1-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 103/145 (71%), Gaps = 3/145 (2%)
Query: 5 STVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLM 64
+T PF++QAE+T+ NY L + C L+PLL+ HARVV++SSS+GHLS+I LKKR
Sbjct: 96 ATEPFSLQAEETLRVNYFSLRKVCSKLYPLLKTHARVVHVSSSSGHLSKIPGESLKKRFS 155
Query: 65 EDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELG 124
+ ++E +L ++M+EF+D K + H+ KGW +SAY SK+GV+ L RI+Q+ F+ +
Sbjct: 156 DPNLTEEELDNIMHEFIDAAKTN--THLEKGWANSAYVASKVGVSALARIHQRMFNSDT- 212
Query: 125 NQDKVINAVHPGYVATNMSSFMGNV 149
+D V+NAVHPGYV T+M+S G +
Sbjct: 213 REDLVVNAVHPGYVDTDMTSHKGTL 237
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|307200580|gb|EFN80721.1| Carbonyl reductase [NADPH] 1 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 99/147 (67%), Gaps = 3/147 (2%)
Query: 5 STVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLM 64
+T PFAIQAE+TI NY L R C L+PLLR HARVV++SSSAG LS IT LKK++
Sbjct: 97 ATEPFAIQAEETIKVNYFSLRRVCTALYPLLRPHARVVHVSSSAGRLSNITGDALKKKIA 156
Query: 65 EDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELG 124
+ +SE +L ++M F++ K H+ GW +SAY SKIGV+ LT I+Q F+ +
Sbjct: 157 DPNLSEEELDNIMRGFVNAAKS--GTHLQAGWSNSAYVASKIGVSALTGIHQAMFNADP- 213
Query: 125 NQDKVINAVHPGYVATNMSSFMGNVNI 151
+D +NAVHPGYV T+M+S G++ I
Sbjct: 214 REDIAVNAVHPGYVDTDMTSHKGHLKI 240
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|380029301|ref|XP_003698315.1| PREDICTED: carbonyl reductase [NADPH] 1-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 101/142 (71%), Gaps = 3/142 (2%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDC 67
PF+IQA +T+ TNY GL + C L+PLL+ HARVV++SSS+GHLS I + L+ R +
Sbjct: 99 PFSIQAAETLKTNYFGLRKVCSKLYPLLKPHARVVHVSSSSGHLSLIPSETLRNRFLNPN 158
Query: 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQD 127
++E +L ++M+EF++ K + H+ KGW +SAY VSK+GV+ L R++Q+ F+ + Q
Sbjct: 159 LTEEELDNIMHEFVEAAKTN--THLEKGWANSAYVVSKVGVSALARVHQRIFNSD-SRQG 215
Query: 128 KVINAVHPGYVATNMSSFMGNV 149
V+NAVHPGYV T+M+S G +
Sbjct: 216 LVVNAVHPGYVDTDMTSHRGTL 237
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|383863073|ref|XP_003707007.1| PREDICTED: carbonyl reductase [NADPH] 1-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 101/146 (69%), Gaps = 3/146 (2%)
Query: 4 ASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRL 63
A+T PF++QAE+T+ NY L + C L+PLL+ HARVV++SSS+G LS I + L+KR
Sbjct: 95 AATEPFSVQAEETVRVNYFALRKVCTLLYPLLKPHARVVHVSSSSGRLSLIPSESLRKRF 154
Query: 64 MEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCEL 123
+ ++E +L ++M+EF++ K + H+ GW +SAY SK+GV+ L R++QK F+ +
Sbjct: 155 SDPNLTEEELDNIMHEFVNTAKTN--THLENGWSNSAYVASKVGVSALARVHQKMFNSD- 211
Query: 124 GNQDKVINAVHPGYVATNMSSFMGNV 149
+D +NAVHPGYV T+M+S G +
Sbjct: 212 SREDLAVNAVHPGYVDTDMTSHKGTL 237
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|91083531|ref|XP_973193.1| PREDICTED: similar to predicted protein [Tribolium castaneum] gi|270010851|gb|EFA07299.1| hypothetical protein TcasGA2_TC014539 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 95/140 (67%), Gaps = 2/140 (1%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDC 67
PF+ QA+ T+ NY L+R C LFP+LR++ARVVNLSSSAGHLS+I + EL+ +
Sbjct: 101 PFSEQAKTTVAVNYFSLLRVCETLFPILRQNARVVNLSSSAGHLSRIPSPELRAKFSNPN 160
Query: 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQD 127
++ QL +M +F+ K + H GW SAY VSK+GV+ LTRI Q++FD E N++
Sbjct: 161 LTVPQLNKLMEQFVQDAKAN--KHQEAGWGTSAYVVSKVGVSALTRIQQREFDKEAPNRN 218
Query: 128 KVINAVHPGYVATNMSSFMG 147
+N+VHPGYV T+M+S G
Sbjct: 219 ISVNSVHPGYVDTDMTSHKG 238
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332372658|gb|AEE61471.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
|---|
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 100/144 (69%), Gaps = 2/144 (1%)
Query: 4 ASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRL 63
A+ PF+ QA+ TI NY ++ C LFPLLR +ARVVNLSSSAGHLS+I + +L+++L
Sbjct: 97 AAPEPFSEQAKTTIAVNYFATLKVCEALFPLLRANARVVNLSSSAGHLSRIPSEQLRQKL 156
Query: 64 MEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCEL 123
+ ++ QL +M +F++ K++ H GW +SAY VSK+GV+ LT+I Q++FD E
Sbjct: 157 NDPNLTVAQLNQLMEKFVEDAKDN--KHQEAGWGNSAYVVSKVGVSALTKIQQREFDKET 214
Query: 124 GNQDKVINAVHPGYVATNMSSFMG 147
++ +N+VHPGYV T+M+S G
Sbjct: 215 PCRNISVNSVHPGYVDTDMTSHKG 238
|
Source: Dendroctonus ponderosae Species: Dendroctonus ponderosae Genus: Dendroctonus Family: Curculionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307181669|gb|EFN69172.1| Carbonyl reductase [NADPH] 1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 92/147 (62%), Gaps = 3/147 (2%)
Query: 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELK 60
N T PF QAE+TI NY L + C L+PLLR HARVV++ SSAG L IT LK
Sbjct: 86 FNVDDTTPFGTQAEETIRINYFSLRKVCTALYPLLRPHARVVHVFSSAGRLCNITGGALK 145
Query: 61 KRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD 120
KRL + ++E +L +M+EF+ K AH+ GW +SAY SKIGV+ L I+Q F+
Sbjct: 146 KRLSDPNLTEAELDKIMHEFVKAAKSD--AHIQAGWSNSAYVASKIGVSALAGIHQSMFN 203
Query: 121 CELGNQDKVINAVHPGYVATNMSSFMG 147
+ +D +NAVHPGYV T+M++ G
Sbjct: 204 VD-SRKDIAVNAVHPGYVDTDMTNHKG 229
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|427787661|gb|JAA59282.1| Putative 20-hydroxysteroid dehydrogenase [Rhipicephalus pulchellus] | Back alignment and taxonomy information |
|---|
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 94/144 (65%), Gaps = 3/144 (2%)
Query: 4 ASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRL 63
AST PFA QAE T+ TN+ G + LFPLLR HARVVNLSSSAG L +I ELKK+L
Sbjct: 97 ASTAPFAEQAEVTVKTNFFGTLNVWKELFPLLRPHARVVNLSSSAGMLQRIPGEELKKKL 156
Query: 64 MEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCEL 123
++ +L +M +F+ K+ A KGW SAY VSK+GV +L+ I Q++F+ +
Sbjct: 157 NNPEITLEELCGLMNDFVQAAKDGKNAE--KGWGQSAYVVSKVGVTVLSFIQQREFNAD- 213
Query: 124 GNQDKVINAVHPGYVATNMSSFMG 147
D V+NAVHPG+V T+M+S G
Sbjct: 214 PRDDLVVNAVHPGFVDTDMTSHKG 237
|
Source: Rhipicephalus pulchellus Species: Rhipicephalus pulchellus Genus: Rhipicephalus Family: Ixodidae Order: Ixodida Class: Arachnida Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|391341573|ref|XP_003745103.1| PREDICTED: carbonyl reductase [NADPH] 1-like [Metaseiulus occidentalis] | Back alignment and taxonomy information |
|---|
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 93/145 (64%), Gaps = 3/145 (2%)
Query: 3 RASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKR 62
RA+T PF +QAE T+ TNY G C L+P+LR ARVV++SS GHLS I + EL+ R
Sbjct: 97 RAATDPFDVQAEVTVRTNYFGTRNVCDILYPILRPGARVVHVSSMCGHLSMIPSPELRAR 156
Query: 63 LMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCE 122
++ QL +M+EF+ K+ H KGW +SAY SK+GV+ L I+Q++FD E
Sbjct: 157 FNAKDLTIEQLNALMHEFVAAAKDG--THKEKGWGNSAYNASKVGVSALGFIHQRQFD-E 213
Query: 123 LGNQDKVINAVHPGYVATNMSSFMG 147
+D ++N VHPGYV T+MSS G
Sbjct: 214 DSREDIIVNVVHPGYVDTDMSSHKG 238
|
Source: Metaseiulus occidentalis Species: Metaseiulus occidentalis Genus: Metaseiulus Family: Phytoseiidae Order: Mesostigmata Class: Arachnida Phylum: Arthropoda Superkingdom: |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 153 | ||||||
| RGD|1309728 | 277 | Cbr3 "carbonyl reductase 3" [R | 0.895 | 0.494 | 0.409 | 6.1e-23 | |
| MGI|MGI:1309992 | 277 | Cbr3 "carbonyl reductase 3" [M | 0.895 | 0.494 | 0.409 | 1e-22 | |
| UNIPROTKB|Q3SZD7 | 277 | CBR1 "Carbonyl reductase [NADP | 0.888 | 0.490 | 0.397 | 2.6e-22 | |
| UNIPROTKB|F1SGX4 | 277 | CBR3 "Uncharacterized protein" | 0.895 | 0.494 | 0.380 | 9e-22 | |
| UNIPROTKB|G1K231 | 277 | LOC100335345 "Uncharacterized | 0.888 | 0.490 | 0.390 | 2.4e-21 | |
| RGD|2286 | 277 | Cbr1 "carbonyl reductase 1" [R | 0.869 | 0.480 | 0.391 | 2.4e-21 | |
| UNIPROTKB|F1N8Y3 | 276 | CBR1 "Uncharacterized protein" | 0.869 | 0.481 | 0.384 | 3e-21 | |
| UNIPROTKB|F1P2X1 | 277 | CBR1 "Uncharacterized protein" | 0.869 | 0.480 | 0.384 | 3e-21 | |
| UNIPROTKB|I3LM03 | 281 | LOC100626165 "Uncharacterized | 0.869 | 0.473 | 0.384 | 3e-21 | |
| MGI|MGI:88284 | 277 | Cbr1 "carbonyl reductase 1" [M | 0.862 | 0.476 | 0.410 | 3e-21 |
| RGD|1309728 Cbr3 "carbonyl reductase 3" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 59/144 (40%), Positives = 88/144 (61%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNL--ELKKRLME 65
PF +QAE T+ TN+ C L P+++ H RVVN+SS G L + N +L++R
Sbjct: 102 PFDVQAEVTLKTNFFATRNVCTELLPIMKPHGRVVNVSSLQG-LKALENCSEDLQERFRC 160
Query: 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGN 125
D ++E L D+M +F++ TK H +GWPDSAY VSK+GV +LTRI ++ D E
Sbjct: 161 DTLTEGDLVDLMKKFVEDTKNE--VHEREGWPDSAYGVSKLGVTVLTRILARQLD-EKRK 217
Query: 126 QDKVI-NAVHPGYVATNMSSFMGN 148
D+++ NA PG+V T+M+ G+
Sbjct: 218 ADRILLNACCPGWVKTDMARDQGS 241
|
|
| MGI|MGI:1309992 Cbr3 "carbonyl reductase 3" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 59/144 (40%), Positives = 88/144 (61%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNL--ELKKRLME 65
PF IQAE T+ TN+ C L P+++ H RVVN+SS G L + N +L+++
Sbjct: 102 PFDIQAEVTLKTNFFATRNVCTELLPIMKPHGRVVNISSLQG-LKALENCREDLQEKFRC 160
Query: 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGN 125
D ++E L D+M +F++ TK H +GWPDSAY VSK+GV +LTRI ++ D E
Sbjct: 161 DTLTEVDLVDLMKKFVEDTKNE--VHEREGWPDSAYGVSKLGVTVLTRILARQLD-EKRK 217
Query: 126 QDKVI-NAVHPGYVATNMSSFMGN 148
D+++ NA PG+V T+M+ G+
Sbjct: 218 ADRILLNACCPGWVKTDMARDQGS 241
|
|
| UNIPROTKB|Q3SZD7 CBR1 "Carbonyl reductase [NADPH] 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 56/141 (39%), Positives = 86/141 (60%)
Query: 4 ASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSS--SAGHLSQITNLELKK 61
A T PF IQAE T+ TN+ G C L PL++ RVVN+SS S L + + EL++
Sbjct: 98 ADTTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSFVSVNSLKKCSR-ELQQ 156
Query: 62 RLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC 121
+ + ++E +L +M +F++ TK H +GWPD+AY V+KIGV +L+RI+ +K
Sbjct: 157 KFRSETITEEELVGLMNKFVEDTKNG--VHRKEGWPDTAYGVTKIGVTVLSRIHARKLSE 214
Query: 122 ELGNQDKVINAVHPGYVATNM 142
+ G ++NA PG+V T+M
Sbjct: 215 QRGGDKILLNACCPGWVRTDM 235
|
|
| UNIPROTKB|F1SGX4 CBR3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 54/142 (38%), Positives = 87/142 (61%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLS-QITNLELKKRLMED 66
PF IQAE T+ TN+ G C+ L P+++ H RVVN+SS G + + + +L+++ +
Sbjct: 102 PFDIQAEMTLKTNFFGTRNVCIELLPIIKPHGRVVNISSLLGSKALENCSEDLQEKFRCE 161
Query: 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQ 126
++E L D+M +F++ K H +GWP SAY VSK+GV +L+RI ++ D E
Sbjct: 162 ALTEEDLVDLMKKFVEDAKNE--VHEREGWPSSAYGVSKLGVTVLSRILAQRLD-EKRKA 218
Query: 127 DKVI-NAVHPGYVATNMSSFMG 147
D+++ NA PG+V T+M+ G
Sbjct: 219 DRILLNACCPGWVKTDMTGGQG 240
|
|
| UNIPROTKB|G1K231 LOC100335345 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 55/141 (39%), Positives = 85/141 (60%)
Query: 4 ASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSS--SAGHLSQITNLELKK 61
A T PF IQAE T+ TN+ G C L PL++ RVVN+SS S L + + EL++
Sbjct: 98 ADTTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSFVSVNSLKKCSR-ELQQ 156
Query: 62 RLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC 121
+ + ++E +L +M +F++ TK H + WPD+AY V+KIGV +L+RI+ +K
Sbjct: 157 KFRSETITEEELVGLMNKFVEDTKNG--VHRKECWPDTAYGVTKIGVTVLSRIHARKLSE 214
Query: 122 ELGNQDKVINAVHPGYVATNM 142
+ G ++NA PG+V T+M
Sbjct: 215 QRGGDKILLNACCPGWVRTDM 235
|
|
| RGD|2286 Cbr1 "carbonyl reductase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 54/138 (39%), Positives = 87/138 (63%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMED 66
PF IQAE T+ TN+ G C L P+++ RVVN+SSS + + EL+++ +
Sbjct: 102 PFHIQAEVTMKTNFFGTQDVCKELLPIIKPQGRVVNVSSSVSLRALKSCSPELQQKFRSE 161
Query: 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQ 126
++E +L +M +F++ K+ H +GWP+SAY V+KIGV +L+RIY +K + E +
Sbjct: 162 TITEEELVGLMNKFIEDAKKG--VHAKEGWPNSAYGVTKIGVTVLSRIYARKLN-EERRE 218
Query: 127 DKVI-NAVHPGYVATNMS 143
DK++ NA PG+V T+M+
Sbjct: 219 DKILLNACCPGWVRTDMA 236
|
|
| UNIPROTKB|F1N8Y3 CBR1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 53/138 (38%), Positives = 87/138 (63%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQI--TNLELKKRLME 65
PFA+QAE T+ TN+ G C L PL++ + RVVN+SS +S + + EL+K+
Sbjct: 101 PFAVQAEVTLKTNFFGTRNICTELLPLIKPYGRVVNVSSMVS-ISALGGCSQELQKKFRS 159
Query: 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGN 125
D ++E +L ++M +F++ TK+ H +GWP++AY VSKIGV +L+RI + + +
Sbjct: 160 DTITEDELVELMTKFVEDTKKS--VHEKEGWPNTAYGVSKIGVTVLSRIQARMLNEKRKG 217
Query: 126 QDKVINAVHPGYVATNMS 143
++NA PG+V T+M+
Sbjct: 218 DHILLNACCPGWVRTDMA 235
|
|
| UNIPROTKB|F1P2X1 CBR1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 53/138 (38%), Positives = 87/138 (63%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQI--TNLELKKRLME 65
PFA+QAE T+ TN+ G C L PL++ + RVVN+SS +S + + EL+K+
Sbjct: 102 PFAVQAEVTLKTNFFGTRNICTELLPLIKPYGRVVNVSSMVS-ISALGGCSQELQKKFRS 160
Query: 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGN 125
D ++E +L ++M +F++ TK+ H +GWP++AY VSKIGV +L+RI + + +
Sbjct: 161 DTITEDELVELMTKFVEDTKKS--VHEKEGWPNTAYGVSKIGVTVLSRIQARMLNEKRKG 218
Query: 126 QDKVINAVHPGYVATNMS 143
++NA PG+V T+M+
Sbjct: 219 DHILLNACCPGWVRTDMA 236
|
|
| UNIPROTKB|I3LM03 LOC100626165 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 53/138 (38%), Positives = 84/138 (60%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNL--ELKKRLME 65
PF IQAE T+ TN+LG C L PL++ RVVN+SS+ + + N EL+++
Sbjct: 102 PFHIQAEVTMKTNFLGTRNVCTELLPLIKPQGRVVNVSSTES-VRALNNCSPELQQKFKS 160
Query: 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGN 125
+ ++E +L +M +F++ TK H +GWP +AY V+KIGV +L+RIY +K +
Sbjct: 161 ETITEEELVGLMNKFVEDTKNG--VHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRAG 218
Query: 126 QDKVINAVHPGYVATNMS 143
++NA PG+V T+M+
Sbjct: 219 DKILLNACCPGWVRTDMA 236
|
|
| MGI|MGI:88284 Cbr1 "carbonyl reductase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 57/139 (41%), Positives = 87/139 (62%)
Query: 8 PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITN--LELKKRLME 65
PF IQAE T+ TN+ G C L PL++ RVVN+SS L + N LEL+++
Sbjct: 102 PFHIQAEVTMKTNFFGTRDVCKELLPLIKPQGRVVNVSSMVS-LRALKNCRLELQQKFRS 160
Query: 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGN 125
+ ++E +L +M +F++ TK+ H +GWP+SAY V+KIGV +L+RI +K + E
Sbjct: 161 ETITEEELVGLMNKFVEDTKKG--VHAEEGWPNSAYGVTKIGVTVLSRILARKLN-EQRR 217
Query: 126 QDKVI-NAVHPGYVATNMS 143
DK++ NA PG+V T+M+
Sbjct: 218 GDKILLNACCPGWVRTDMA 236
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 153 | |||
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 2e-21 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 1e-08 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 4e-08 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 3e-06 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 6e-06 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 3e-05 | |
| PRK12937 | 245 | PRK12937, PRK12937, short chain dehydrogenase; Pro | 7e-05 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 9e-05 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 2e-04 | |
| PRK12428 | 241 | PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro | 2e-04 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 2e-04 | |
| PRK06935 | 258 | PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog | 4e-04 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 0.001 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 0.002 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 0.002 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 0.003 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 0.003 | |
| PRK08177 | 225 | PRK08177, PRK08177, short chain dehydrogenase; Pro | 0.003 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 86.1 bits (214), Expect = 2e-21
Identities = 38/142 (26%), Positives = 54/142 (38%), Gaps = 54/142 (38%)
Query: 6 TVPFAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRL 63
+ P QA +T+ TN+ G V L PLL++ R+VN+SS G L+
Sbjct: 96 STPTREQARETMKTNFFGTVDVTQALLPLLKKSPAGRIVNVSSGLGSLT----------- 144
Query: 64 MEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCEL 123
SAY VSK +N LTRI K+
Sbjct: 145 -----------------------------------SAYGVSKAALNALTRILAKEL---- 165
Query: 124 GNQDKV-INAVHPGYVATNMSS 144
+ + +NA PG+V T+M
Sbjct: 166 -KETGIKVNACCPGWVKTDMGG 186
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 1e-08
Identities = 29/132 (21%), Positives = 42/132 (31%), Gaps = 50/132 (37%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRH--ARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71
++ + N G+ P +++ R+VN+SS AG
Sbjct: 99 DRVLDVNLTGVFLLTRAALPHMKKQGGGRIVNISSVAGL--------------------- 137
Query: 72 QLTDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVI 130
+ P +AYA SK + LTR EL +
Sbjct: 138 ----------------------RPLPGQAAYAASKAALEGLTRSLAL----ELAPYGIRV 171
Query: 131 NAVHPGYVATNM 142
NAV PG V T M
Sbjct: 172 NAVAPGLVDTPM 183
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 4e-08
Identities = 30/131 (22%), Positives = 43/131 (32%), Gaps = 47/131 (35%)
Query: 12 QAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71
++ I N LG PL+++ R+VN+SS AG
Sbjct: 110 DWDRVIDVNLLGAFLLTRAALPLMKK-QRIVNISSVAGL--------------------- 147
Query: 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVIN 131
+AYA SK + LT+ EL + +N
Sbjct: 148 ---------------------GGPPGQAAYAASKAALIGLTKALAL----ELAPRGIRVN 182
Query: 132 AVHPGYVATNM 142
AV PGY+ T M
Sbjct: 183 AVAPGYIDTPM 193
|
Length = 251 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 3e-06
Identities = 31/132 (23%), Positives = 45/132 (34%), Gaps = 36/132 (27%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71
E NYLG L P+L+ +R+VN+SS A H + + S
Sbjct: 103 ELQFAVNYLGHFLLTNLLLPVLKASAPSRIVNVSSIA-HRAGPIDFNDLDLENNKEYSPY 161
Query: 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-I 130
+ AY SK+ L TR ++ V +
Sbjct: 162 K---------------------------AYGQSKLANILFTRELARRL-----EGTGVTV 189
Query: 131 NAVHPGYVATNM 142
NA+HPG V T +
Sbjct: 190 NALHPGVVRTEL 201
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 6e-06
Identities = 35/139 (25%), Positives = 44/139 (31%), Gaps = 52/139 (37%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHA--RVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71
E+ I N G P L R R+V SS AG
Sbjct: 108 ERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAG---------------------- 145
Query: 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVI 130
G+P A YA SK G+ TR EL ++ +
Sbjct: 146 --------------------PRVGYPGLAHYAASKAGLVGFTRALAL----ELAARNITV 181
Query: 131 NAVHPGYVATNMSSFMGNV 149
N+VHPG V T M GN+
Sbjct: 182 NSVHPGGVDTPM---AGNL 197
|
Length = 251 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 3e-05
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
+AY+ SK V LTR CE + +NAV PGYV T M
Sbjct: 152 TAYSASKAAVISLTR----SLACEWAAKGIRVNAVLPGYVRTQM 191
|
Length = 520 |
| >gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 7e-05
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 92 VAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
+A P YA SK V L + EL + +NAV PG VAT +
Sbjct: 143 IALPLPGYGPYAASKAAVEGLVHVLAN----ELRGRGITVNAVAPGPVATEL 190
|
Length = 245 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 9e-05
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 97 PDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
P AYA SK GV LT+ E +NA+ PGY AT M+
Sbjct: 150 PVPAYAASKGGVAGLTKALAT----EWARHGIQVNAIAPGYFATEMT 192
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 2e-04
Identities = 27/134 (20%), Positives = 44/134 (32%), Gaps = 45/134 (33%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71
+ N LG + PLL + A+++N+SS G + T+
Sbjct: 101 LEVFQVNVLGPLLLTQAFLPLLLKGARAKIINISSRVGSIGDNTSG-------------- 146
Query: 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVIN 131
+Y SK +N+LT K EL +
Sbjct: 147 -------------------------GWYSYRASKAALNMLT----KSLAVELKRDGITVV 177
Query: 132 AVHPGYVATNMSSF 145
++HPG+V T+M
Sbjct: 178 SLHPGWVRTDMGGP 191
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 2e-04
Identities = 36/134 (26%), Positives = 48/134 (35%), Gaps = 18/134 (13%)
Query: 7 VPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMED 66
VP E N+LGL L P + +VN++S AG LEL K L
Sbjct: 58 VPGTAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAG-AEWPQRLELHKALAA- 115
Query: 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQ 126
T E HP A + Y +SK + L T ++ G +
Sbjct: 116 -------TASFDEGAAWLAAHPVAL------ATGYQLSKEALILWT--MRQAQP-WFGAR 159
Query: 127 DKVINAVHPGYVAT 140
+N V PG V T
Sbjct: 160 GIRVNCVAPGPVFT 173
|
Length = 241 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 2e-04
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
AYA SK V TR+ K ELG + +NAV PG V T+M
Sbjct: 149 GAYAGSKAAVEAFTRVLAK----ELGGRGITVNAVAPGPVDTDM 188
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 4e-04
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 100 AYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141
AY SK GV LT K F EL + +NA+ PGY+ T
Sbjct: 162 AYTASKHGVAGLT----KAFANELAAYNIQVNAIAPGYIKTA 199
|
Length = 258 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.001
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 20 NYLGLVRTCVFLFPLLRR-HARVVNLSSSAG 49
N G V PLLRR RVVN+SS G
Sbjct: 110 NLFGTVEVTKAFLPLLRRAKGRVVNVSSMGG 140
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 37.0 bits (86), Expect = 0.002
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
+AY SK V LT+ +C +N+VHPGY+ T M
Sbjct: 149 AAYNASKGAVRGLTKS--AALECATQGYGIRVNSVHPGYIYTPM 190
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 36.9 bits (86), Expect = 0.002
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 100 AYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
AY SK V +TR + ELG + +NA+ PG AT
Sbjct: 155 AYVASKGAVIGMTRSLAR----ELGGRGITVNAIAPGLTATEA 193
|
Length = 250 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 36.4 bits (85), Expect = 0.003
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 90 AHVAKGWP-DSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
GWP S YA +K G+ LT+ + EL +N V PG + T+M
Sbjct: 144 VAGLPGWPGRSNYAAAKAGLVGLTKALAR----ELAEYGITVNMVAPGDIDTDM 193
|
Length = 249 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 35.9 bits (83), Expect = 0.003
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
AY SK + LTR EL + NA+ PG + T +
Sbjct: 148 GAYGASKAAIRNLTRT----LAAELRHAGIRCNALAPGLIDTPL 187
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 36.2 bits (84), Expect = 0.003
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 97 PDSA----YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
PD Y SK +N +TR F ELG + ++HPG+V T+M
Sbjct: 139 PDGGEMPLYKASKAALNSMTR----SFVAELGEPTLTVLSMHPGWVKTDM 184
|
Length = 225 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 153 | |||
| KOG1200|consensus | 256 | 99.81 | ||
| KOG1611|consensus | 249 | 99.81 | ||
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.81 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.8 | |
| KOG1205|consensus | 282 | 99.8 | ||
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.8 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.79 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.79 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.79 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.79 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.79 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.78 | |
| KOG1201|consensus | 300 | 99.78 | ||
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.77 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.77 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.76 | |
| KOG1610|consensus | 322 | 99.76 | ||
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.76 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.76 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.75 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.75 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.74 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.74 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.72 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.71 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.71 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.71 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.71 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.7 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.69 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.69 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.69 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.68 | |
| KOG4169|consensus | 261 | 99.68 | ||
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.68 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.67 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.66 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.65 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.65 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.65 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.65 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.65 | |
| KOG1208|consensus | 314 | 99.65 | ||
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.64 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.64 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.64 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.64 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.63 | |
| KOG0725|consensus | 270 | 99.63 | ||
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.62 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.62 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.62 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.61 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.61 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.61 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.61 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.61 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.61 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.61 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.6 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.6 | |
| KOG1204|consensus | 253 | 99.6 | ||
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.6 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.59 | |
| KOG1207|consensus | 245 | 99.59 | ||
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.59 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.59 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.58 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.58 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.58 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.57 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.57 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.57 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.57 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.56 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.54 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.54 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.54 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.54 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.54 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.53 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.53 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.52 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.51 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.51 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.51 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.51 | |
| KOG1209|consensus | 289 | 99.51 | ||
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.5 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.5 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.5 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.5 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.5 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.49 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.49 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.49 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.48 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.47 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.47 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.46 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.45 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.45 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.43 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.43 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.43 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.42 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.42 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.42 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.41 | |
| KOG1014|consensus | 312 | 99.41 | ||
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.4 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.4 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.39 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.39 | |
| KOG1210|consensus | 331 | 99.39 | ||
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.38 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.37 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.37 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.34 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.34 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.33 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.33 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.3 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.3 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.26 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.26 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.26 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.22 | |
| KOG1199|consensus | 260 | 99.2 | ||
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.2 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.18 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.14 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.13 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.01 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.92 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.85 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.84 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.54 | |
| KOG1478|consensus | 341 | 98.53 | ||
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 98.44 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 98.15 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 97.93 | |
| KOG4022|consensus | 236 | 97.91 | ||
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 97.81 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.61 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 97.61 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 97.61 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 97.48 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.45 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 97.44 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 97.38 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 97.36 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 97.34 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 97.3 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 97.24 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 97.09 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 97.04 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 96.99 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 96.77 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 96.75 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 96.42 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 96.41 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 96.29 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 96.24 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 96.21 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 96.2 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 96.05 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 95.89 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 95.88 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 95.84 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 95.73 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 95.44 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 95.23 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 95.13 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 94.5 | |
| KOG1502|consensus | 327 | 94.3 | ||
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 94.21 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 94.18 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 94.11 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 93.63 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 93.43 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 93.36 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 93.34 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 92.78 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 92.77 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 92.43 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 91.99 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 91.48 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 91.33 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 89.77 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 89.34 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 88.83 | |
| KOG0747|consensus | 331 | 88.66 | ||
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 88.57 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 87.7 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 85.77 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 85.39 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 83.71 | |
| KOG1221|consensus | 467 | 82.29 | ||
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 82.13 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 81.68 |
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.5e-21 Score=142.10 Aligned_cols=101 Identities=25% Similarity=0.287 Sum_probs=88.9
Q ss_pred CCCCCCCccH-------HHHHHHHhhhhhHHHHHHHHHhhhh--cC--CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVPFA-------IQAEKTILTNYLGLVRTCVFLFPLL--RR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~~~-------~~~~~~~~vN~~g~~~l~~~~lp~l--~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
+||||+..+. ++|++.+.+|+.|.|++++.+.+.| .+ +.+|||+||+.| .+-
T Consensus 95 VncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN---------------- 158 (256)
T KOG1200|consen 95 VNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN---------------- 158 (256)
T ss_pred EEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc----------------
Confidence 5899997554 8999999999999999999999985 22 359999999999 542
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMGN 148 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~~ 148 (153)
++..-|+++|.+++.|+|..++|+.++ |||||+|+||+|.|||+...++
T Consensus 159 ---------------------------~GQtnYAAsK~GvIgftktaArEla~k----nIrvN~VlPGFI~tpMT~~mp~ 207 (256)
T KOG1200|consen 159 ---------------------------FGQTNYAASKGGVIGFTKTAARELARK----NIRVNVVLPGFIATPMTEAMPP 207 (256)
T ss_pred ---------------------------ccchhhhhhcCceeeeeHHHHHHHhhc----CceEeEeccccccChhhhhcCH
Confidence 225789999999999999999999999 9999999999999999988765
|
|
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.1e-20 Score=139.91 Aligned_cols=109 Identities=25% Similarity=0.331 Sum_probs=92.1
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCC-------------ccEEEecCCccc-ccccccHH
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRRH-------------ARVVNLSSSAGH-LSQITNLE 58 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~-------------g~iv~~sS~~~~-~~~~~~~~ 58 (153)
|||||+.. ..+.|.+.++||.+|+++++|.++|+|++. +.|||+||..+. ....
T Consensus 89 inNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~~---- 164 (249)
T KOG1611|consen 89 INNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGFR---- 164 (249)
T ss_pred EeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCCC----
Confidence 68999863 336799999999999999999999999753 379999998873 2111
Q ss_pred HHhhhhccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc
Q psy16223 59 LKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV 138 (153)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v 138 (153)
.....+|..||+|+++|+|+++.|+.+. +|.|..+|||||
T Consensus 165 ------------------------------------~~~~~AYrmSKaAlN~f~ksls~dL~~~----~ilv~sihPGwV 204 (249)
T KOG1611|consen 165 ------------------------------------PGGLSAYRMSKAALNMFAKSLSVDLKDD----HILVVSIHPGWV 204 (249)
T ss_pred ------------------------------------CcchhhhHhhHHHHHHHHHHhhhhhcCC----cEEEEEecCCeE
Confidence 0124899999999999999999999988 899999999999
Q ss_pred cCCCCCCCCCCCCCC
Q psy16223 139 ATNMSSFMGNVNIFD 153 (153)
Q Consensus 139 ~T~~~~~~~~~~~~~ 153 (153)
+|+|.+.....++|+
T Consensus 205 ~TDMgg~~a~ltvee 219 (249)
T KOG1611|consen 205 QTDMGGKKAALTVEE 219 (249)
T ss_pred EcCCCCCCcccchhh
Confidence 999999988888774
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-19 Score=143.36 Aligned_cols=97 Identities=20% Similarity=0.208 Sum_probs=84.5
Q ss_pred CCCCCCCc-----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-----------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||..+ ..++|++++++|+.|++++++.++|.|+++|+||++||..+ ...+.
T Consensus 88 VnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~-------------- 153 (274)
T PRK08415 88 VHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPH-------------- 153 (274)
T ss_pred EECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCc--------------
Confidence 68999742 13789999999999999999999999988899999999876 33221
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+|+.+|+|+|+.|+.++ ||+||+|+||+|+|+|..
T Consensus 154 -----------------------------~~~Y~asKaal~~l~~~la~el~~~----gIrVn~v~PG~v~T~~~~ 196 (274)
T PRK08415 154 -----------------------------YNVMGVAKAALESSVRYLAVDLGKK----GIRVNAISAGPIKTLAAS 196 (274)
T ss_pred -----------------------------chhhhhHHHHHHHHHHHHHHHhhhc----CeEEEEEecCccccHHHh
Confidence 3689999999999999999999988 999999999999998754
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-19 Score=141.35 Aligned_cols=97 Identities=11% Similarity=0.124 Sum_probs=84.7
Q ss_pred CCCCCCCc-----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-----------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.+++.+++.++|+|+++|+||++||..+ ...+.
T Consensus 90 VnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~-------------- 155 (271)
T PRK06505 90 VHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPN-------------- 155 (271)
T ss_pred EECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCc--------------
Confidence 68998742 12789999999999999999999999987899999999876 33222
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+|+..|+|+|+.|+.++ ||+||+|+||+|+|+|..
T Consensus 156 -----------------------------~~~Y~asKaAl~~l~r~la~el~~~----gIrVn~v~PG~i~T~~~~ 198 (271)
T PRK06505 156 -----------------------------YNVMGVAKAALEASVRYLAADYGPQ----GIRVNAISAGPVRTLAGA 198 (271)
T ss_pred -----------------------------cchhhhhHHHHHHHHHHHHHHHhhc----CeEEEEEecCCccccccc
Confidence 3689999999999999999999988 999999999999999864
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-19 Score=142.98 Aligned_cols=98 Identities=21% Similarity=0.251 Sum_probs=84.7
Q ss_pred CCCCCCCccH-------HHHHHHHhhhhhHHHHHHHHHhhhhcC-C-ccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPFA-------IQAEKTILTNYLGLVRTCVFLFPLLRR-H-ARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~~-------~~~~~~~~vN~~g~~~l~~~~lp~l~~-~-g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||..... +++..+|+||++|++.+||+++|+|++ + |+||++||..| ...|.
T Consensus 96 VNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~---------------- 159 (282)
T KOG1205|consen 96 VNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF---------------- 159 (282)
T ss_pred EecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc----------------
Confidence 6999986422 678899999999999999999999976 3 99999999999 66554
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCC--eEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQD--KVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~g--i~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+.+|+.+|+.|+... + |++ .|+||+|+|++....
T Consensus 160 ---------------------------~~~Y~ASK~Al~~f~etLR~El~~~----~~~i~i-~V~PG~V~Te~~~~~ 205 (282)
T KOG1205|consen 160 ---------------------------RSIYSASKHALEGFFETLRQELIPL----GTIIII-LVSPGPIETEFTGKE 205 (282)
T ss_pred ---------------------------ccccchHHHHHHHHHHHHHHHhhcc----CceEEE-EEecCceeecccchh
Confidence 4689999999999999999999986 4 666 999999999976543
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.9e-19 Score=137.81 Aligned_cols=102 Identities=21% Similarity=0.200 Sum_probs=89.2
Q ss_pred CCCCCCCccH-------HHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPFA-------IQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~~-------~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||..... ++|++++++|+.|.+..+++++|.|.. .|.|||+||.+| ..++.
T Consensus 86 vNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~---------------- 149 (246)
T COG4221 86 VNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPG---------------- 149 (246)
T ss_pred EecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCC----------------
Confidence 6999987443 899999999999999999999999943 589999999999 66654
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMGNV 149 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~ 149 (153)
...|+++|+++..|+..|+.|+..+ +|||..|+||.|.|.......+.
T Consensus 150 ---------------------------~~vY~ATK~aV~~fs~~LR~e~~g~----~IRVt~I~PG~v~~~~~s~v~~~ 197 (246)
T COG4221 150 ---------------------------GAVYGATKAAVRAFSLGLRQELAGT----GIRVTVISPGLVETTEFSTVRFE 197 (246)
T ss_pred ---------------------------CccchhhHHHHHHHHHHHHHHhcCC----CeeEEEecCceecceecccccCC
Confidence 5789999999999999999999988 89999999999988766555443
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.1e-19 Score=138.87 Aligned_cols=98 Identities=12% Similarity=0.075 Sum_probs=84.5
Q ss_pred CCCCCCCc------------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccc
Q psy16223 1 MNRASTVP------------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDC 67 (153)
Q Consensus 1 innag~~~------------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~ 67 (153)
|||||... ..++|++++++|+.|++.+++.++|+|+++|+||++||..+ ...+.
T Consensus 89 vnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~------------- 155 (260)
T PRK06997 89 VHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPN------------- 155 (260)
T ss_pred EEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCC-------------
Confidence 68998742 12689999999999999999999999987899999999877 33221
Q ss_pred cChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
..+|++||+|++.++|+|+.|+.++ ||+||+|+||+|+|+|...
T Consensus 156 ------------------------------~~~Y~asKaal~~l~~~la~el~~~----gIrVn~i~PG~v~T~~~~~ 199 (260)
T PRK06997 156 ------------------------------YNTMGLAKASLEASVRYLAVSLGPK----GIRANGISAGPIKTLAASG 199 (260)
T ss_pred ------------------------------cchHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeeCccccchhcc
Confidence 3679999999999999999999988 9999999999999988643
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.7e-19 Score=138.29 Aligned_cols=98 Identities=14% Similarity=0.096 Sum_probs=85.1
Q ss_pred CCCCCCCc-----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-----------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.+++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 88 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~-------------- 153 (252)
T PRK06079 88 VHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPN-------------- 153 (252)
T ss_pred EEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCc--------------
Confidence 58898642 22789999999999999999999999988899999999877 33222
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+|++.|+|+|+.|+.++ ||+||+|+||+|+|+|...
T Consensus 154 -----------------------------~~~Y~asKaal~~l~~~la~el~~~----gI~vn~i~PG~v~T~~~~~ 197 (252)
T PRK06079 154 -----------------------------YNVMGIAKAALESSVRYLARDLGKK----GIRVNAISAGAVKTLAVTG 197 (252)
T ss_pred -----------------------------chhhHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCccccccccc
Confidence 3689999999999999999999988 9999999999999998644
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.3e-19 Score=138.37 Aligned_cols=98 Identities=12% Similarity=0.137 Sum_probs=84.9
Q ss_pred CCCCCCCc-----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-----------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||..+ ..++|++++++|+.|++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 93 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~-------------- 158 (258)
T PRK07533 93 LHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVEN-------------- 158 (258)
T ss_pred EEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCcc--------------
Confidence 58998742 23789999999999999999999999988899999999776 33221
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+|+..|+|+|+.|+.+. ||+||+|+||+|+|+|...
T Consensus 159 -----------------------------~~~Y~asKaal~~l~~~la~el~~~----gI~Vn~v~PG~v~T~~~~~ 202 (258)
T PRK07533 159 -----------------------------YNLMGPVKAALESSVRYLAAELGPK----GIRVHAISPGPLKTRAASG 202 (258)
T ss_pred -----------------------------chhhHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCCcCChhhhc
Confidence 3689999999999999999999988 9999999999999998654
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.3e-19 Score=138.48 Aligned_cols=98 Identities=17% Similarity=0.190 Sum_probs=85.0
Q ss_pred CCCCCCCc-------c----HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-------F----AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-------~----~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... . .++|++++++|+.|++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 92 v~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~-------------- 157 (258)
T PRK07370 92 VHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPN-------------- 157 (258)
T ss_pred EEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcc--------------
Confidence 58898642 1 2789999999999999999999999988899999999876 33222
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+|+..|+++|+.|+.++ ||+||+|+||+|+|++...
T Consensus 158 -----------------------------~~~Y~asKaal~~l~~~la~el~~~----gI~Vn~i~PG~v~T~~~~~ 201 (258)
T PRK07370 158 -----------------------------YNVMGVAKAALEASVRYLAAELGPK----NIRVNAISAGPIRTLASSA 201 (258)
T ss_pred -----------------------------cchhhHHHHHHHHHHHHHHHHhCcC----CeEEEEEecCcccCchhhc
Confidence 3689999999999999999999988 9999999999999998653
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.4e-19 Score=142.37 Aligned_cols=99 Identities=11% Similarity=0.121 Sum_probs=83.8
Q ss_pred CCCCCCC-----cc----HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTV-----PF----AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~-----~~----~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.. +. .++|++++++|+.|++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 125 VnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~II~isS~a~~~~~p~---------------- 188 (303)
T PLN02730 125 VHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGASISLTYIASERIIPG---------------- 188 (303)
T ss_pred EECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechhhcCCCCC----------------
Confidence 6899642 11 2789999999999999999999999988899999999877 43321
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhcc-ccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC-ELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~-~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
+ ...|++||+++..|+|+|+.|+.+ + ||+||+|+||+|+|+|.+.
T Consensus 189 -------------------------~-~~~Y~asKaAl~~l~~~la~El~~~~----gIrVn~V~PG~v~T~~~~~ 234 (303)
T PLN02730 189 -------------------------Y-GGGMSSAKAALESDTRVLAFEAGRKY----KIRVNTISAGPLGSRAAKA 234 (303)
T ss_pred -------------------------C-chhhHHHHHHHHHHHHHHHHHhCcCC----CeEEEEEeeCCccCchhhc
Confidence 1 137999999999999999999975 6 8999999999999999764
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.3e-19 Score=137.67 Aligned_cols=97 Identities=12% Similarity=0.115 Sum_probs=84.2
Q ss_pred CCCCCCCc-----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-----------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.+++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 91 Vnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~-------------- 156 (260)
T PRK06603 91 LHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPN-------------- 156 (260)
T ss_pred EEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCc--------------
Confidence 58888632 23789999999999999999999999988899999999776 33222
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+|++.|+|+|+.|+.++ ||+||+|+||+|+|+|..
T Consensus 157 -----------------------------~~~Y~asKaal~~l~~~la~el~~~----gIrVn~v~PG~v~T~~~~ 199 (260)
T PRK06603 157 -----------------------------YNVMGVAKAALEASVKYLANDMGEN----NIRVNAISAGPIKTLASS 199 (260)
T ss_pred -----------------------------ccchhhHHHHHHHHHHHHHHHhhhc----CeEEEEEecCcCcchhhh
Confidence 3689999999999999999999988 999999999999999864
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-18 Score=137.55 Aligned_cols=101 Identities=20% Similarity=0.184 Sum_probs=89.1
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhc--CCccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLR--RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~--~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||+.+. .++++++++||+.|+|+.+|.|+|.|. ++|+||.++|.+| .+.++
T Consensus 119 VNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~g---------------- 182 (300)
T KOG1201|consen 119 VNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAG---------------- 182 (300)
T ss_pred EeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCcc----------------
Confidence 699999743 388999999999999999999999995 4699999999999 54333
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
-..|++||+|+.+|+++|..|+... +.+||+...|||++++|.|...
T Consensus 183 ---------------------------l~~YcaSK~a~vGfhesL~~EL~~~-~~~~IktTlv~P~~i~Tgmf~~ 229 (300)
T KOG1201|consen 183 ---------------------------LADYCASKFAAVGFHESLSMELRAL-GKDGIKTTLVCPYFINTGMFDG 229 (300)
T ss_pred ---------------------------chhhhhhHHHHHHHHHHHHHHHHhc-CCCCeeEEEEeeeeccccccCC
Confidence 3789999999999999999999865 5558999999999999999986
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-18 Score=134.65 Aligned_cols=98 Identities=23% Similarity=0.280 Sum_probs=85.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..+.|++++++|+.|++.+++.++|.|++.++||++||..+ ...+.
T Consensus 93 v~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------------------ 154 (252)
T PRK12747 93 INNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD------------------ 154 (252)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCC------------------
Confidence 58888642 22679999999999999999999999988899999999887 33221
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..++++++.|+.++ ||+||+|+||+|+|+|...
T Consensus 155 -------------------------~~~Y~~sKaa~~~~~~~la~e~~~~----girvn~v~Pg~v~t~~~~~ 198 (252)
T PRK12747 155 -------------------------FIAYSMTKGAINTMTFTLAKQLGAR----GITVNAILPGFIKTDMNAE 198 (252)
T ss_pred -------------------------chhHHHHHHHHHHHHHHHHHHHhHc----CCEEEEEecCCccCchhhh
Confidence 3689999999999999999999988 9999999999999998754
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-18 Score=135.73 Aligned_cols=99 Identities=15% Similarity=0.131 Sum_probs=83.2
Q ss_pred CCCCCCCc-----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-----------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||..+ ..++|++++++|+.|++.+++.++|.|+++|+||+++|......+.
T Consensus 90 i~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~~~~--------------- 154 (256)
T PRK07889 90 VHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVAWPA--------------- 154 (256)
T ss_pred EEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccccCCc---------------
Confidence 68998753 1267999999999999999999999998889999998653222211
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++.+|+|+|+.|+.++ ||+||+|+||+|+|+|.+.+
T Consensus 155 ----------------------------~~~Y~asKaal~~l~~~la~el~~~----gIrvn~v~PG~v~T~~~~~~ 199 (256)
T PRK07889 155 ----------------------------YDWMGVAKAALESTNRYLARDLGPR----GIRVNLVAAGPIRTLAAKAI 199 (256)
T ss_pred ----------------------------cchhHHHHHHHHHHHHHHHHHhhhc----CeEEEeeccCcccChhhhcc
Confidence 3579999999999999999999988 99999999999999986543
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-18 Score=136.74 Aligned_cols=97 Identities=10% Similarity=0.059 Sum_probs=84.3
Q ss_pred CCCCCCCc-----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-----------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 93 v~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~-------------- 158 (272)
T PRK08159 93 VHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPH-------------- 158 (272)
T ss_pred EECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCc--------------
Confidence 68998752 23789999999999999999999999988899999999766 33222
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+|+..|+|+|+.|+.++ ||+||+|+||+|+|+|..
T Consensus 159 -----------------------------~~~Y~asKaal~~l~~~la~el~~~----gIrVn~v~PG~v~T~~~~ 201 (272)
T PRK08159 159 -----------------------------YNVMGVAKAALEASVKYLAVDLGPK----NIRVNAISAGPIKTLAAS 201 (272)
T ss_pred -----------------------------chhhhhHHHHHHHHHHHHHHHhccc----CeEEEEeecCCcCCHHHh
Confidence 3689999999999999999999988 999999999999998764
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-18 Score=134.60 Aligned_cols=97 Identities=12% Similarity=0.051 Sum_probs=84.1
Q ss_pred CCCCCCCc-----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-----------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.+++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 92 v~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~-------------- 157 (257)
T PRK08594 92 AHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQN-------------- 157 (257)
T ss_pred EECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCC--------------
Confidence 58888642 12689999999999999999999999988899999999887 43222
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+|++.|+|+++.|+.++ ||+||+|+||+|+|++.+
T Consensus 158 -----------------------------~~~Y~asKaal~~l~~~la~el~~~----gIrvn~v~PG~v~T~~~~ 200 (257)
T PRK08594 158 -----------------------------YNVMGVAKASLEASVKYLANDLGKD----GIRVNAISAGPIRTLSAK 200 (257)
T ss_pred -----------------------------CchhHHHHHHHHHHHHHHHHHhhhc----CCEEeeeecCcccCHhHh
Confidence 3689999999999999999999988 999999999999999754
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-18 Score=136.31 Aligned_cols=97 Identities=30% Similarity=0.452 Sum_probs=87.3
Q ss_pred CCCCCCCcc--------HHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF--------AIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~--------~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||+... .++++++++||++|++.+|+.++|.+++ .||||++||..| ...|.
T Consensus 111 VNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~---------------- 174 (322)
T KOG1610|consen 111 VNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPA---------------- 174 (322)
T ss_pred EeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcc----------------
Confidence 799996522 2889999999999999999999999987 699999999999 44443
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+|+..|+-+|++|+.+. ||.|..|.||+..|++..
T Consensus 175 ---------------------------~g~Y~~SK~aVeaf~D~lR~EL~~f----GV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 175 ---------------------------LGPYCVSKFAVEAFSDSLRRELRPF----GVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred ---------------------------cccchhhHHHHHHHHHHHHHHHHhc----CcEEEEeccCccccccCC
Confidence 4789999999999999999999999 999999999999999986
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.9e-18 Score=137.39 Aligned_cols=99 Identities=11% Similarity=0.116 Sum_probs=83.3
Q ss_pred CCCCCCCc-----c----HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-----F----AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-----~----~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... . .++|++++++|+.|++.+++.++|.|+++|+||+++|..+ ...+.
T Consensus 124 VnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~~p~---------------- 187 (299)
T PRK06300 124 VHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAVPG---------------- 187 (299)
T ss_pred EECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCcCCC----------------
Confidence 58997532 1 2789999999999999999999999988899999999877 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhcc-ccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC-ELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~-~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
+ ...|++||++++.|+|+|+.|+.+ . ||+||+|+||+++|+|...
T Consensus 188 -------------------------~-~~~Y~asKaAl~~lt~~la~el~~~~----gIrVn~V~PG~v~T~~~~~ 233 (299)
T PRK06300 188 -------------------------Y-GGGMSSAKAALESDTKVLAWEAGRRW----GIRVNTISAGPLASRAGKA 233 (299)
T ss_pred -------------------------c-cHHHHHHHHHHHHHHHHHHHHhCCCC----CeEEEEEEeCCccChhhhc
Confidence 1 126999999999999999999975 6 8999999999999998753
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.5e-18 Score=134.04 Aligned_cols=97 Identities=13% Similarity=0.073 Sum_probs=83.4
Q ss_pred CCCCCCCc------------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccc
Q psy16223 1 MNRASTVP------------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDC 67 (153)
Q Consensus 1 innag~~~------------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~ 67 (153)
|||||..+ ..++|++++++|+.|++.+++.+.|.|+++|+||++||..+ ...+.
T Consensus 89 innAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~------------- 155 (262)
T PRK07984 89 VHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN------------- 155 (262)
T ss_pred EECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCC-------------
Confidence 68998642 12679999999999999999999998877899999999876 33221
Q ss_pred cChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+|+.+|+|+++.|+.+. ||+||+|+||+|+|+|..
T Consensus 156 ------------------------------~~~Y~asKaal~~l~~~la~el~~~----gIrVn~i~PG~v~T~~~~ 198 (262)
T PRK07984 156 ------------------------------YNVMGLAKASLEANVRYMANAMGPE----GVRVNAISAGPIRTLAAS 198 (262)
T ss_pred ------------------------------cchhHHHHHHHHHHHHHHHHHhccc----CcEEeeeecCcccchHHh
Confidence 3689999999999999999999988 999999999999998754
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.3e-18 Score=133.85 Aligned_cols=97 Identities=18% Similarity=0.125 Sum_probs=83.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.+++.+++.++|.|++ .|+||++||..+ ...+.
T Consensus 90 v~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~---------------- 153 (263)
T PRK08339 90 FFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPN---------------- 153 (263)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCc----------------
Confidence 58888642 23789999999999999999999999964 489999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++..|+|+++.|+.++ ||+||+|+||+|+|+|..
T Consensus 154 ---------------------------~~~y~asKaal~~l~~~la~el~~~----gIrVn~v~PG~v~T~~~~ 196 (263)
T PRK08339 154 ---------------------------IALSNVVRISMAGLVRTLAKELGPK----GITVNGIMPGIIRTDRVI 196 (263)
T ss_pred ---------------------------chhhHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeCcCccHHHH
Confidence 3679999999999999999999988 999999999999999854
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.9e-18 Score=133.40 Aligned_cols=97 Identities=23% Similarity=0.290 Sum_probs=86.6
Q ss_pred CCCCCCCccH-------HHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPFA-------IQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~~-------~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||...+. ++.++++++|+++...+++.++|.|.+ .|.||+++|.++ ...|.
T Consensus 89 VNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~---------------- 152 (265)
T COG0300 89 VNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPY---------------- 152 (265)
T ss_pred EECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcc----------------
Confidence 6999986332 778999999999999999999999955 589999999999 54443
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
+..|++||+++..|+.+|+.|+.+. ||+|.+|+||+|.|++..
T Consensus 153 ---------------------------~avY~ATKa~v~~fSeaL~~EL~~~----gV~V~~v~PG~~~T~f~~ 195 (265)
T COG0300 153 ---------------------------MAVYSATKAFVLSFSEALREELKGT----GVKVTAVCPGPTRTEFFD 195 (265)
T ss_pred ---------------------------hHHHHHHHHHHHHHHHHHHHHhcCC----CeEEEEEecCcccccccc
Confidence 5789999999999999999999988 999999999999999996
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.4e-18 Score=134.01 Aligned_cols=129 Identities=17% Similarity=0.201 Sum_probs=88.2
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
|||||.....++|++++++|+.|++.+++.++|.|++++++|++||..+...+.........+ ......++.... +
T Consensus 81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~ 156 (275)
T PRK06940 81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERAL--ATTPTEELLSLP--F 156 (275)
T ss_pred EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccc--cccccccccccc--c
Confidence 689998766678999999999999999999999998888999999987732210000000000 000000000000 0
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
. ++.... .....|++||+|+.+++|++++++.+. ||+||+|+||+|+|+|...
T Consensus 157 ~-------~~~~~~-~~~~~Y~asKaa~~~~~~~la~e~~~~----gIrvn~i~PG~v~T~~~~~ 209 (275)
T PRK06940 157 L-------QPDAIE-DSLHAYQIAKRANALRVMAEAVKWGER----GARINSISPGIISTPLAQD 209 (275)
T ss_pred c-------cccccC-CccchhHHHHHHHHHHHHHHHHHHccC----CeEEEEeccCcCcCccchh
Confidence 0 000000 013689999999999999999999888 9999999999999998753
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.6e-18 Score=131.98 Aligned_cols=98 Identities=14% Similarity=0.064 Sum_probs=83.7
Q ss_pred CCCCCCCcc------------HHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhcc
Q psy16223 1 MNRASTVPF------------AIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~~------------~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~ 66 (153)
|||||+... .++|++++++|+.+++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 89 VnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~------------ 156 (261)
T PRK08690 89 VHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPN------------ 156 (261)
T ss_pred EECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCC------------
Confidence 589987531 1579999999999999999999999965 489999999877 33322
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+|+..|+|.++.|+.++ ||+||+|+||+|+|+|...
T Consensus 157 -------------------------------~~~Y~asKaal~~l~~~la~e~~~~----gIrVn~i~PG~v~T~~~~~ 200 (261)
T PRK08690 157 -------------------------------YNVMGMAKASLEAGIRFTAACLGKE----GIRCNGISAGPIKTLAASG 200 (261)
T ss_pred -------------------------------cccchhHHHHHHHHHHHHHHHhhhc----CeEEEEEecCcccchhhhc
Confidence 3689999999999999999999998 9999999999999998654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.4e-18 Score=130.82 Aligned_cols=99 Identities=20% Similarity=0.216 Sum_probs=84.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.+++.+++.++|.|++ +|+||++||..+ ...+.
T Consensus 88 v~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------- 152 (251)
T PRK12481 88 INNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR--------------- 152 (251)
T ss_pred EECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC---------------
Confidence 58898743 23789999999999999999999999954 479999999877 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++..++++++.|+.+. ||+||+|+||+|+|+|....
T Consensus 153 ----------------------------~~~Y~asK~a~~~l~~~la~e~~~~----girvn~v~PG~v~t~~~~~~ 197 (251)
T PRK12481 153 ----------------------------VPSYTASKSAVMGLTRALATELSQY----NINVNAIAPGYMATDNTAAL 197 (251)
T ss_pred ----------------------------CcchHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCCCccCchhhc
Confidence 3689999999999999999999988 99999999999999987643
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.1e-17 Score=126.45 Aligned_cols=85 Identities=20% Similarity=0.068 Sum_probs=76.5
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCC
Q psy16223 10 AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPR 89 (153)
Q Consensus 10 ~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
.++|++++++|+.+++.+++.++|.|+++|+||++||... +.
T Consensus 95 ~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~---~~----------------------------------- 136 (223)
T PRK05884 95 ANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP---PA----------------------------------- 136 (223)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC---CC-----------------------------------
Confidence 3679999999999999999999999988899999998652 11
Q ss_pred ccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 90 AHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 90 ~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++.+|+|+++.|+.++ ||+|++|+||+++|++..
T Consensus 137 --------~~~Y~asKaal~~~~~~la~e~~~~----gI~v~~v~PG~v~t~~~~ 179 (223)
T PRK05884 137 --------GSAEAAIKAALSNWTAGQAAVFGTR----GITINAVACGRSVQPGYD 179 (223)
T ss_pred --------ccccHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCccCchhhh
Confidence 3689999999999999999999988 999999999999999754
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-17 Score=129.80 Aligned_cols=98 Identities=21% Similarity=0.243 Sum_probs=84.0
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+.|++++++|+.|++.+++.++|+|++ +++||++||..+ ...+.
T Consensus 87 i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 150 (272)
T PRK08589 87 FNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLY---------------- 150 (272)
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCC----------------
Confidence 58888752 12679999999999999999999999964 589999999877 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..|+++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 151 ---------------------------~~~Y~asKaal~~l~~~la~e~~~~----gI~v~~v~PG~v~T~~~~~ 194 (272)
T PRK08589 151 ---------------------------RSGYNAAKGAVINFTKSIAIEYGRD----GIRANAIAPGTIETPLVDK 194 (272)
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCcccCchhhh
Confidence 3689999999999999999999988 9999999999999998754
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-17 Score=127.75 Aligned_cols=125 Identities=22% Similarity=0.157 Sum_probs=87.7
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
|||||... .+++++++++|+.+++.+++.++|.|+++|+||++||..+...+...+....... ....+..
T Consensus 53 i~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~-----~~~~~~~---- 122 (241)
T PRK12428 53 FNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAA-----TASFDEG---- 122 (241)
T ss_pred EECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhc-----cchHHHH----
Confidence 58999763 3569999999999999999999999988899999999887432111000000000 0000000
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHH-HHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQ-KKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~-~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
....+. ....+ ...|++||+++.++++.++ .++.+. ||+||+|+||+|+|+|.+.
T Consensus 123 ~~~~~~----~~~~~--~~~Y~~sK~a~~~~~~~la~~e~~~~----girvn~v~PG~v~T~~~~~ 178 (241)
T PRK12428 123 AAWLAA----HPVAL--ATGYQLSKEALILWTMRQAQPWFGAR----GIRVNCVAPGPVFTPILGD 178 (241)
T ss_pred HHhhhc----cCCCc--ccHHHHHHHHHHHHHHHHHHHhhhcc----CeEEEEeecCCccCccccc
Confidence 011111 01112 3689999999999999999 999887 9999999999999999764
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.6e-17 Score=127.80 Aligned_cols=98 Identities=21% Similarity=0.311 Sum_probs=83.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.+++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 154 (260)
T PRK07063 91 VNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPG---------------- 154 (260)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCC----------------
Confidence 58898642 23789999999999999999999999964 489999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..++|+++.|+.+. ||+||+|+||+|+|++...
T Consensus 155 ---------------------------~~~Y~~sKaa~~~~~~~la~el~~~----gIrvn~v~PG~v~t~~~~~ 198 (260)
T PRK07063 155 ---------------------------CFPYPVAKHGLLGLTRALGIEYAAR----NVRVNAIAPGYIETQLTED 198 (260)
T ss_pred ---------------------------chHHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEeeCCccChhhhh
Confidence 3689999999999999999999988 9999999999999998654
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.9e-18 Score=129.17 Aligned_cols=87 Identities=29% Similarity=0.321 Sum_probs=78.8
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPR 89 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
++|++++++|+.+++.+++++.|+|+++|+||++||..+ ...+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~----------------------------------- 143 (241)
T PF13561_consen 99 EDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPG----------------------------------- 143 (241)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTT-----------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCcc-----------------------------------
Confidence 789999999999999999999999999999999999877 33222
Q ss_pred ccccCCCCCchhHHhHHHHHHHHHHHHHHhcc-ccCCCCeEEEEeeCCcccCCCCC
Q psy16223 90 AHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC-ELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 90 ~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~-~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|++++.|+|+++.||.+ + |||||+|+||+|+|++..
T Consensus 144 --------~~~y~~sKaal~~l~r~lA~el~~~~----gIrVN~V~pG~i~t~~~~ 187 (241)
T PF13561_consen 144 --------YSAYSASKAALEGLTRSLAKELAPKK----GIRVNAVSPGPIETPMTE 187 (241)
T ss_dssp --------THHHHHHHHHHHHHHHHHHHHHGGHG----TEEEEEEEESSBSSHHHH
T ss_pred --------chhhHHHHHHHHHHHHHHHHHhcccc----Ceeeeeecccceeccchh
Confidence 368999999999999999999999 9 999999999999998754
|
... |
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.5e-17 Score=127.14 Aligned_cols=97 Identities=18% Similarity=0.184 Sum_probs=82.7
Q ss_pred CCCCCCCc----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC----CccEEEecCCcc-cccccccHHHHhhhhc
Q psy16223 1 MNRASTVP----------FAIQAEKTILTNYLGLVRTCVFLFPLLRR----HARVVNLSSSAG-HLSQITNLELKKRLME 65 (153)
Q Consensus 1 innag~~~----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~ 65 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 92 v~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~----------- 160 (256)
T TIGR01500 92 INNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG----------- 160 (256)
T ss_pred EeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC-----------
Confidence 58898631 23679999999999999999999999964 368999999876 33222
Q ss_pred cccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..|+++|+.|+.+. ||+|++|+||+|+|+|.+
T Consensus 161 --------------------------------~~~Y~asKaal~~l~~~la~e~~~~----~i~v~~v~PG~v~T~~~~ 203 (256)
T TIGR01500 161 --------------------------------WALYCAGKAARDMLFQVLALEEKNP----NVRVLNYAPGVLDTDMQQ 203 (256)
T ss_pred --------------------------------chHHHHHHHHHHHHHHHHHHHhcCC----CeEEEEecCCcccchHHH
Confidence 3689999999999999999999887 899999999999999875
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.8e-17 Score=130.73 Aligned_cols=97 Identities=20% Similarity=0.260 Sum_probs=83.7
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccc---cccccHHHHhhhhcc
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHL---SQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~---~~~~~~~~~~~~~~~ 66 (153)
|||||... ..+++++++++|+.|++.+++.++|.|.+ .|+||++||..+.. .+.
T Consensus 137 VnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~------------ 204 (320)
T PLN02780 137 INNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPL------------ 204 (320)
T ss_pred EEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCcc------------
Confidence 58998742 12679999999999999999999999954 58999999987732 121
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..|+++|+.|+.++ ||+|++|+||+|+|+|..
T Consensus 205 -------------------------------~~~Y~aSKaal~~~~~~L~~El~~~----gI~V~~v~PG~v~T~~~~ 247 (320)
T PLN02780 205 -------------------------------YAVYAATKAYIDQFSRCLYVEYKKS----GIDVQCQVPLYVATKMAS 247 (320)
T ss_pred -------------------------------chHHHHHHHHHHHHHHHHHHHHhcc----CeEEEEEeeCceecCccc
Confidence 4789999999999999999999988 999999999999999976
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.6e-17 Score=128.98 Aligned_cols=96 Identities=25% Similarity=0.290 Sum_probs=82.2
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--------CccEEEecCCcc-cccccccHHHHhhhh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--------HARVVNLSSSAG-HLSQITNLELKKRLM 64 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--------~g~iv~~sS~~~-~~~~~~~~~~~~~~~ 64 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +|+||++||..+ ...+.
T Consensus 97 v~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~---------- 166 (286)
T PRK07791 97 VNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVG---------- 166 (286)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCCC----------
Confidence 58998742 23789999999999999999999999853 269999999887 43322
Q ss_pred ccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 65 EDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..++|+++.|+.+. ||+||+|+|| ++|+|..
T Consensus 167 ---------------------------------~~~Y~asKaal~~l~~~la~el~~~----gIrVn~v~Pg-~~T~~~~ 208 (286)
T PRK07791 167 ---------------------------------QGNYSAAKAGIAALTLVAAAELGRY----GVTVNAIAPA-ARTRMTE 208 (286)
T ss_pred ---------------------------------chhhHHHHHHHHHHHHHHHHHHHHh----CeEEEEECCC-CCCCcch
Confidence 4789999999999999999999988 9999999999 8999864
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-16 Score=119.92 Aligned_cols=96 Identities=11% Similarity=0.046 Sum_probs=82.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..++|++++++|+.+++.+++.++|+|+++++|+++||..+ ...+.
T Consensus 60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~------------------ 121 (199)
T PRK07578 60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPG------------------ 121 (199)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCC------------------
Confidence 57888642 23679999999999999999999999988899999999877 33222
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++.+|+++++.|+ +. ||+|++|+||+++|+|..
T Consensus 122 -------------------------~~~Y~~sK~a~~~~~~~la~e~-~~----gi~v~~i~Pg~v~t~~~~ 163 (199)
T PRK07578 122 -------------------------GASAATVNGALEGFVKAAALEL-PR----GIRINVVSPTVLTESLEK 163 (199)
T ss_pred -------------------------chHHHHHHHHHHHHHHHHHHHc-cC----CeEEEEEcCCcccCchhh
Confidence 3689999999999999999999 77 899999999999999753
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-16 Score=127.40 Aligned_cols=96 Identities=24% Similarity=0.185 Sum_probs=83.4
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 133 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~----------------- 195 (294)
T PRK07985 133 ALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH----------------- 195 (294)
T ss_pred EECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC-----------------
Confidence 57888531 23789999999999999999999999988899999999877 33221
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|+++|+++..++++++.|+.++ ||+|++|+||+|+|+|.
T Consensus 196 --------------------------~~~Y~asKaal~~l~~~la~el~~~----gIrvn~i~PG~v~t~~~ 237 (294)
T PRK07985 196 --------------------------LLDYAATKAAILNYSRGLAKQVAEK----GIRVNIVAPGPIWTALQ 237 (294)
T ss_pred --------------------------cchhHHHHHHHHHHHHHHHHHHhHh----CcEEEEEECCcCccccc
Confidence 3689999999999999999999988 99999999999999985
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-16 Score=126.81 Aligned_cols=98 Identities=26% Similarity=0.238 Sum_probs=84.8
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCccc-ccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGH-LSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+. ..+.
T Consensus 139 V~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------------- 201 (300)
T PRK06128 139 VNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT----------------- 201 (300)
T ss_pred EECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC-----------------
Confidence 58898641 237899999999999999999999999888999999998773 3221
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..|+++++.++.+. ||+|++|+||+|+|+|...
T Consensus 202 --------------------------~~~Y~asK~a~~~~~~~la~el~~~----gI~v~~v~PG~i~t~~~~~ 245 (300)
T PRK06128 202 --------------------------LLDYASTKAAIVAFTKALAKQVAEK----GIRVNAVAPGPVWTPLQPS 245 (300)
T ss_pred --------------------------chhHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEEECcCcCCCccc
Confidence 3679999999999999999999988 9999999999999998643
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.6e-17 Score=136.69 Aligned_cols=98 Identities=24% Similarity=0.242 Sum_probs=85.5
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------- 410 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPP----------------- 410 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCC-----------------
Confidence 58998742 12689999999999999999999999977799999999887 43322
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++++|+|+|+.|+.+. ||+||+|+||+|+|+|...
T Consensus 411 --------------------------~~~Y~asKaal~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~ 454 (520)
T PRK06484 411 --------------------------RNAYCASKAAVTMLSRSLACEWAPA----GIRVNTVAPGYIETPAVLA 454 (520)
T ss_pred --------------------------CchhHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEeCCccCchhhh
Confidence 4789999999999999999999988 9999999999999998754
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-16 Score=122.80 Aligned_cols=99 Identities=20% Similarity=0.244 Sum_probs=83.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .+.+++++++|+.+++.+++.++|.|.+ +|+||++||..+ ...+.
T Consensus 82 v~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~--------------- 146 (246)
T PRK05599 82 VVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRA--------------- 146 (246)
T ss_pred EEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcC---------------
Confidence 588887522 1457788999999999999999999953 489999999887 43221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|+++.+|+++|+.|+.++ ||+|++|+||+|+|+|....
T Consensus 147 ----------------------------~~~Y~asKaa~~~~~~~la~el~~~----~I~v~~v~PG~v~T~~~~~~ 191 (246)
T PRK05599 147 ----------------------------NYVYGSTKAGLDAFCQGLADSLHGS----HVRLIIARPGFVIGSMTTGM 191 (246)
T ss_pred ----------------------------CcchhhHHHHHHHHHHHHHHHhcCC----CceEEEecCCcccchhhcCC
Confidence 4789999999999999999999888 89999999999999987654
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-17 Score=127.69 Aligned_cols=98 Identities=29% Similarity=0.379 Sum_probs=84.2
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcC-----CccEEEecCCcc-cccccccHHHHhhhhccccChHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRR-----HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLT 74 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (153)
||+||+.- +.+|++++++|+.|.+..+...+|+|.+ +|-|||+||..| .+.+.
T Consensus 88 INgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~-------------------- 146 (261)
T KOG4169|consen 88 INGAGILD-DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPV-------------------- 146 (261)
T ss_pred Eccccccc-chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcccc--------------------
Confidence 69999984 5569999999999999999999999954 478999999999 55443
Q ss_pred HHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHh--ccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 75 DMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKF--DCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~--~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++..|+|+|+... .+. ||++++||||++.|+|...+
T Consensus 147 -----------------------~pVY~AsKaGVvgFTRSla~~ayy~~s----GV~~~avCPG~t~t~l~~~~ 193 (261)
T KOG4169|consen 147 -----------------------FPVYAASKAGVVGFTRSLADLAYYQRS----GVRFNAVCPGFTRTDLAENI 193 (261)
T ss_pred -----------------------chhhhhcccceeeeehhhhhhhhHhhc----CEEEEEECCCcchHHHHHHH
Confidence 4789999999999999998543 345 89999999999999987665
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-16 Score=123.05 Aligned_cols=101 Identities=25% Similarity=0.250 Sum_probs=83.9
Q ss_pred CCCCCCCc---c-----HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP---F-----AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~---~-----~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... . .++|++++++|+.+++.+++.++|.|++ .++||++||..+...+.
T Consensus 88 i~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~---------------- 151 (254)
T PRK07478 88 FNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF---------------- 151 (254)
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCC----------------
Confidence 58898642 1 2789999999999999999999999964 48999999987632110
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
.....|++||+++..++++++.++.+. ||+|++|+||+|+|+|.+..
T Consensus 152 -------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~ 198 (254)
T PRK07478 152 -------------------------PGMAAYAASKAGLIGLTQVLAAEYGAQ----GIRVNALLPGGTDTPMGRAM 198 (254)
T ss_pred -------------------------CCcchhHHHHHHHHHHHHHHHHHHhhc----CEEEEEEeeCcccCcccccc
Confidence 013789999999999999999999988 99999999999999987654
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-16 Score=123.51 Aligned_cols=99 Identities=20% Similarity=0.238 Sum_probs=83.9
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.+++.+++.++|.|.+ +|+||++||..+ ...+.
T Consensus 90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 154 (253)
T PRK08993 90 VNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR--------------- 154 (253)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC---------------
Confidence 588987421 2789999999999999999999999853 479999999876 32211
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|+++..++++++.++.+. ||+|++|+||+++|+|...+
T Consensus 155 ----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~----gi~v~~v~pG~v~T~~~~~~ 199 (253)
T PRK08993 155 ----------------------------VPSYTASKSGVMGVTRLMANEWAKH----NINVNAIAPGYMATNNTQQL 199 (253)
T ss_pred ----------------------------CcchHHHHHHHHHHHHHHHHHhhhh----CeEEEEEeeCcccCcchhhh
Confidence 3689999999999999999999988 99999999999999987643
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-16 Score=127.67 Aligned_cols=89 Identities=19% Similarity=0.198 Sum_probs=75.4
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEH 87 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (153)
++|++++++|+.+++.++++++|.|++ +|+||++||..+ .....
T Consensus 122 ~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~--------------------------------- 168 (305)
T PRK08303 122 DKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATH--------------------------------- 168 (305)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcC---------------------------------
Confidence 679999999999999999999999954 489999999765 21100
Q ss_pred CCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 88 PRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 88 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
.-....|++||+++.+|+|+|+.|+.+. ||+||+|+||+|+|+|.
T Consensus 169 -------~~~~~~Y~asKaal~~lt~~La~el~~~----gIrVn~v~PG~v~T~~~ 213 (305)
T PRK08303 169 -------YRLSVFYDLAKTSVNRLAFSLAHELAPH----GATAVALTPGWLRSEMM 213 (305)
T ss_pred -------CCCcchhHHHHHHHHHHHHHHHHHhhhc----CcEEEEecCCccccHHH
Confidence 0013679999999999999999999988 99999999999999985
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-16 Score=122.74 Aligned_cols=97 Identities=16% Similarity=0.185 Sum_probs=83.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.+++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 92 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 155 (265)
T PRK07062 92 VNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPH---------------- 155 (265)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCC----------------
Confidence 58898642 23689999999999999999999999965 489999999887 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++.+++++++.|+.++ ||+|++|+||+|+|++..
T Consensus 156 ---------------------------~~~y~asKaal~~~~~~la~e~~~~----gi~v~~i~PG~v~t~~~~ 198 (265)
T PRK07062 156 ---------------------------MVATSAARAGLLNLVKSLATELAPK----GVRVNSILLGLVESGQWR 198 (265)
T ss_pred ---------------------------chHhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCccccchhh
Confidence 3689999999999999999999988 999999999999999854
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-16 Score=123.31 Aligned_cols=98 Identities=20% Similarity=0.194 Sum_probs=84.0
Q ss_pred CCCCCCC------ccHHHHHHHHhhhhhHHHHHHHHHhhhh-cCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTV------PFAIQAEKTILTNYLGLVRTCVFLFPLL-RRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~------~~~~~~~~~~~vN~~g~~~l~~~~lp~l-~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||.. ...++|++++++|+.+++.+++.++|.| +++++||++||..+ ...+.
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------------------ 146 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTG------------------ 146 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC------------------
Confidence 5888864 2347899999999999999999999999 45689999999877 43322
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..++++++.|+.+. ||++|+|+||+++|++...
T Consensus 147 -------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~~~t~~~~~ 190 (261)
T PRK08265 147 -------------------------RWLYPASKAAIRQLTRSMAMDLAPD----GIRVNSVSPGWTWSRVMDE 190 (261)
T ss_pred -------------------------CchhHHHHHHHHHHHHHHHHHhccc----CEEEEEEccCCccChhhhh
Confidence 3689999999999999999999988 9999999999999998653
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.9e-16 Score=121.72 Aligned_cols=99 Identities=23% Similarity=0.304 Sum_probs=83.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------------- 154 (254)
T PRK06114 91 VNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG---------------- 154 (254)
T ss_pred EECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC----------------
Confidence 58898752 23789999999999999999999999954 479999999887 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.....|+++|+++..++++++.|+.++ ||+||+|+||+|+|+|..
T Consensus 155 -------------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~----gi~v~~v~PG~i~t~~~~ 199 (254)
T PRK06114 155 -------------------------LLQAHYNASKAGVIHLSKSLAMEWVGR----GIRVNSISPGYTATPMNT 199 (254)
T ss_pred -------------------------CCcchHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEeecCccCcccc
Confidence 113689999999999999999999988 999999999999999975
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.3e-16 Score=122.78 Aligned_cols=89 Identities=13% Similarity=0.103 Sum_probs=78.2
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEH 87 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (153)
++|+.++++|+.+++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 115 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------------------------- 161 (260)
T PRK08416 115 KGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIEN--------------------------------- 161 (260)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCC---------------------------------
Confidence 679999999999999999999999965 479999999876 33222
Q ss_pred CCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 88 PRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 88 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.++++|+.|+.+. ||+|++|+||+++|+|.+.+
T Consensus 162 ----------~~~Y~asK~a~~~~~~~la~el~~~----gi~v~~v~PG~i~T~~~~~~ 206 (260)
T PRK08416 162 ----------YAGHGTSKAAVETMVKYAATELGEK----NIRVNAVSGGPIDTDALKAF 206 (260)
T ss_pred ----------cccchhhHHHHHHHHHHHHHHhhhh----CeEEEEEeeCcccChhhhhc
Confidence 3689999999999999999999988 99999999999999986544
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.8e-16 Score=121.65 Aligned_cols=100 Identities=22% Similarity=0.240 Sum_probs=82.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCccc-ccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAGH-LSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.+++.+++.++|.|.+ +++||++||..+. ....
T Consensus 91 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------- 155 (253)
T PRK05867 91 VCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVP--------------- 155 (253)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCC---------------
Confidence 58888742 23789999999999999999999999954 3789999997763 2100
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
.....|+++|+++..++|+++.++.++ ||+||+|+||+|+|++...
T Consensus 156 --------------------------~~~~~Y~asKaal~~~~~~la~e~~~~----gI~vn~i~PG~v~t~~~~~ 201 (253)
T PRK05867 156 --------------------------QQVSHYCASKAAVIHLTKAMAVELAPH----KIRVNSVSPGYILTELVEP 201 (253)
T ss_pred --------------------------CCccchHHHHHHHHHHHHHHHHHHhHh----CeEEEEeecCCCCCccccc
Confidence 012689999999999999999999988 9999999999999998754
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.2e-16 Score=121.19 Aligned_cols=97 Identities=20% Similarity=0.174 Sum_probs=82.5
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ +|+||++||..+ ...+.
T Consensus 101 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 164 (256)
T PRK12859 101 VNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVG---------------- 164 (256)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCCC----------------
Confidence 578886421 2789999999999999999999999964 589999999887 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++..|+++++.++..+ ||+|++|+||+++|++..
T Consensus 165 ---------------------------~~~Y~~sK~a~~~l~~~la~~~~~~----~i~v~~v~PG~i~t~~~~ 207 (256)
T PRK12859 165 ---------------------------ELAYAATKGAIDALTSSLAAEVAHL----GITVNAINPGPTDTGWMT 207 (256)
T ss_pred ---------------------------chHHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEEccccCCCCC
Confidence 3789999999999999999999988 999999999999998643
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.4e-16 Score=125.38 Aligned_cols=99 Identities=19% Similarity=0.202 Sum_probs=85.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|.+ +|+||++||..+ ...+.
T Consensus 90 I~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------- 152 (296)
T PRK05872 90 VANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPG----------------- 152 (296)
T ss_pred EECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCC-----------------
Confidence 58998742 23789999999999999999999999854 689999999877 33222
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.|+++++.|+... ||+|++|+||+++|+|....
T Consensus 153 --------------------------~~~Y~asKaal~~~~~~l~~e~~~~----gi~v~~v~Pg~v~T~~~~~~ 197 (296)
T PRK05872 153 --------------------------MAAYCASKAGVEAFANALRLEVAHH----GVTVGSAYLSWIDTDLVRDA 197 (296)
T ss_pred --------------------------chHHHHHHHHHHHHHHHHHHHHHHH----CcEEEEEecCcccchhhhhc
Confidence 3689999999999999999999988 99999999999999997653
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.7e-16 Score=120.52 Aligned_cols=100 Identities=30% Similarity=0.360 Sum_probs=83.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+...+.
T Consensus 84 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------------- 146 (255)
T PRK06463 84 VNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA----------------- 146 (255)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC-----------------
Confidence 57888742 23679999999999999999999999963 58999999987632110
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
.....|++||+++.+++++++.|+.+. ||+|++|+||+|+|++...
T Consensus 147 ------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~----~i~v~~i~Pg~v~t~~~~~ 192 (255)
T PRK06463 147 ------------------------EGTTFYAITKAGIIILTRRLAFELGKY----GIRVNAVAPGWVETDMTLS 192 (255)
T ss_pred ------------------------CCccHhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCCCCCchhhc
Confidence 013679999999999999999999988 9999999999999998743
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.7e-16 Score=124.35 Aligned_cols=129 Identities=16% Similarity=0.117 Sum_probs=83.5
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC----CccEEEecCCccccc-c-c-ccHHHHhhhhc
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR----HARVVNLSSSAGHLS-Q-I-TNLELKKRLME 65 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~----~g~iv~~sS~~~~~~-~-~-~~~~~~~~~~~ 65 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+... . . ..+.
T Consensus 80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~------- 152 (308)
T PLN00015 80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPK------- 152 (308)
T ss_pred EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCc-------
Confidence 68998742 13789999999999999999999999954 379999999877311 0 0 0000
Q ss_pred cccChHHHHHHHHHHH--HHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhcc-ccCCCCeEEEEeeCCcc-cCC
Q psy16223 66 DCVSERQLTDMMYEFM--DITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC-ELGNQDKVINAVHPGYV-ATN 141 (153)
Q Consensus 66 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~-~~~~~gi~v~~v~PG~v-~T~ 141 (153)
.....++.+...+. +..... .... .....+|+.||+|+..+++.+++++.. . ||+|++||||+| +|+
T Consensus 153 --~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~aY~~SK~a~~~~~~~la~~~~~~~----gi~v~~v~PG~v~~t~ 223 (308)
T PLN00015 153 --ANLGDLRGLAGGLNGLNSSAMI-DGGE--FDGAKAYKDSKVCNMLTMQEFHRRYHEET----GITFASLYPGCIATTG 223 (308)
T ss_pred --cchhhhhhhhcccCCccchhhc-cccC--CcHHHHHhHhHHHHHHHHHHHHHhhcccC----CeEEEEecCCcccCcc
Confidence 00000000000000 000000 0000 112378999999999999999999964 5 899999999999 799
Q ss_pred CCCC
Q psy16223 142 MSSF 145 (153)
Q Consensus 142 ~~~~ 145 (153)
|.+.
T Consensus 224 ~~~~ 227 (308)
T PLN00015 224 LFRE 227 (308)
T ss_pred cccc
Confidence 8754
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6e-16 Score=120.28 Aligned_cols=97 Identities=14% Similarity=0.015 Sum_probs=82.0
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhc-C--CccEEEecCCcc-cccccccHHHHhhhhccc
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLR-R--HARVVNLSSSAG-HLSQITNLELKKRLMEDC 67 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~-~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~ 67 (153)
|||||... ..++|.+++++|+.+++.+++.++|.|. + +|+||++||..+ ...+.
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~------------- 147 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPP------------- 147 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCC-------------
Confidence 58898632 1267899999999999999999999884 2 489999999877 33221
Q ss_pred cChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++..++|+|+.++.++ ||+|++|+||+++|++.+
T Consensus 148 ------------------------------~~~y~~sKaa~~~~~~~la~e~~~~----gI~v~~v~pG~v~t~~~~ 190 (259)
T PRK08340 148 ------------------------------LVLADVTRAGLVQLAKGVSRTYGGK----GIRAYTVLLGSFDTPGAR 190 (259)
T ss_pred ------------------------------chHHHHHHHHHHHHHHHHHHHhCCC----CEEEEEeccCcccCccHH
Confidence 3689999999999999999999988 999999999999999864
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.5e-16 Score=120.74 Aligned_cols=97 Identities=22% Similarity=0.265 Sum_probs=81.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|+|++ .++||++||..+ ...+.
T Consensus 77 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 140 (258)
T PRK06398 77 VNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRN---------------- 140 (258)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCC----------------
Confidence 58888642 23789999999999999999999999954 589999999877 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..++++++.|+.. +|+||+|+||+++|+|...
T Consensus 141 ---------------------------~~~Y~~sKaal~~~~~~la~e~~~-----~i~vn~i~PG~v~T~~~~~ 183 (258)
T PRK06398 141 ---------------------------AAAYVTSKHAVLGLTRSIAVDYAP-----TIRCVAVCPGSIRTPLLEW 183 (258)
T ss_pred ---------------------------CchhhhhHHHHHHHHHHHHHHhCC-----CCEEEEEecCCccchHHhh
Confidence 478999999999999999999865 4999999999999998653
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.2e-16 Score=122.03 Aligned_cols=98 Identities=18% Similarity=0.270 Sum_probs=83.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++++.++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~---------------- 144 (277)
T PRK05993 81 FNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKY---------------- 144 (277)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCc----------------
Confidence 57887642 23779999999999999999999999965 379999999877 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.++++|+.|+.+. ||+|++|+||+|+|++...
T Consensus 145 ---------------------------~~~Y~asK~a~~~~~~~l~~el~~~----gi~v~~v~Pg~v~T~~~~~ 188 (277)
T PRK05993 145 ---------------------------RGAYNASKFAIEGLSLTLRMELQGS----GIHVSLIEPGPIETRFRAN 188 (277)
T ss_pred ---------------------------cchHHHHHHHHHHHHHHHHHHhhhh----CCEEEEEecCCccCchhhH
Confidence 4789999999999999999999988 9999999999999998753
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.4e-16 Score=126.10 Aligned_cols=110 Identities=35% Similarity=0.422 Sum_probs=84.7
Q ss_pred CCCCCCCcc-----HHHHHHHHhhhhhHHHHHHHHHhhhhcCC--ccEEEecCCcccccccccHHHHhhhhccccChHHH
Q psy16223 1 MNRASTVPF-----AIQAEKTILTNYLGLVRTCVFLFPLLRRH--ARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73 (153)
Q Consensus 1 innag~~~~-----~~~~~~~~~vN~~g~~~l~~~~lp~l~~~--g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (153)
|||||++.. .|++|.+|+||++|+|++++.++|.|++. +|||++||..| .......++.
T Consensus 119 InNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~------------- 184 (314)
T KOG1208|consen 119 INNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLS------------- 184 (314)
T ss_pred EeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhcc-------------
Confidence 699999722 38899999999999999999999999874 79999999987 1111111110
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC-CCC
Q psy16223 74 TDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN-MSS 144 (153)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~-~~~ 144 (153)
+.....++...+|+.||.++..+++.|++++.. ||.++++|||.|.|+ +.+
T Consensus 185 ---------------~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-----~V~~~~~hPG~v~t~~l~r 236 (314)
T KOG1208|consen 185 ---------------GEKAKLYSSDAAYALSKLANVLLANELAKRLKK-----GVTTYSVHPGVVKTTGLSR 236 (314)
T ss_pred ---------------chhccCccchhHHHHhHHHHHHHHHHHHHHhhc-----CceEEEECCCcccccceec
Confidence 111111232357999999999999999999976 799999999999999 555
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=7e-16 Score=131.19 Aligned_cols=99 Identities=24% Similarity=0.330 Sum_probs=85.3
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.|++.+++.++|.|.+ +|+||++||..+ ...+.
T Consensus 397 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------- 461 (582)
T PRK05855 397 VNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS--------------- 461 (582)
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC---------------
Confidence 589988532 3789999999999999999999999965 379999999887 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.++++++.|+.+. ||+|++|+||+|+|+|.+..
T Consensus 462 ----------------------------~~~Y~~sKaa~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~~ 506 (582)
T PRK05855 462 ----------------------------LPAYATSKAAVLMLSECLRAELAAA----GIGVTAICPGFVDTNIVATT 506 (582)
T ss_pred ----------------------------CcHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEEeCCCcccchhcc
Confidence 4789999999999999999999988 99999999999999987653
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-15 Score=116.58 Aligned_cols=100 Identities=20% Similarity=0.189 Sum_probs=83.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (153)
|||||... ..++|++++++|+.|++.+++.+++.|+++++||++||..+...+.
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------------- 140 (237)
T PRK12742 80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPV------------------- 140 (237)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCC-------------------
Confidence 57887642 1268999999999999999999999998889999999977621111
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 74 TDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
.....|+.+|+++..+++.++.++.+. ||+|++|+||+++|++...
T Consensus 141 ----------------------~~~~~Y~~sKaa~~~~~~~la~~~~~~----gi~v~~v~Pg~~~t~~~~~ 186 (237)
T PRK12742 141 ----------------------AGMAAYAASKSALQGMARGLARDFGPR----GITINVVQPGPIDTDANPA 186 (237)
T ss_pred ----------------------CCCcchHHhHHHHHHHHHHHHHHHhhh----CeEEEEEecCcccCCcccc
Confidence 014789999999999999999999888 9999999999999998653
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=7e-16 Score=119.77 Aligned_cols=96 Identities=19% Similarity=0.197 Sum_probs=81.5
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.+++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~---------------- 149 (259)
T PRK06125 86 VNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDAD---------------- 149 (259)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCC----------------
Confidence 578886432 2789999999999999999999999965 479999999876 32211
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|+++|+++..++++++.|+... ||+|++|+||+++|++.
T Consensus 150 ---------------------------~~~y~ask~al~~~~~~la~e~~~~----gi~v~~i~PG~v~t~~~ 191 (259)
T PRK06125 150 ---------------------------YICGSAGNAALMAFTRALGGKSLDD----GVRVVGVNPGPVATDRM 191 (259)
T ss_pred ---------------------------chHhHHHHHHHHHHHHHHHHHhCcc----CeEEEEEecCccccHHH
Confidence 3679999999999999999999888 99999999999999964
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.64 E-value=9e-16 Score=119.48 Aligned_cols=86 Identities=19% Similarity=0.172 Sum_probs=74.3
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHP 88 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (153)
+.|++++++|+.+++.+++.++|.|.+ +++||+++|..+ ...+.
T Consensus 106 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------------------------------- 151 (262)
T TIGR03325 106 EAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGG---------------------------------- 151 (262)
T ss_pred HHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCC----------------------------------
Confidence 368999999999999999999999954 589999999776 32211
Q ss_pred CccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 89 RAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 89 ~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.++.+ +|+||+|+||+|+|+|..
T Consensus 152 ---------~~~Y~~sKaa~~~l~~~la~e~~~-----~irvn~i~PG~i~t~~~~ 193 (262)
T TIGR03325 152 ---------GPLYTAAKHAVVGLVKELAFELAP-----YVRVNGVAPGGMSSDLRG 193 (262)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHhhcc-----CeEEEEEecCCCcCCCcc
Confidence 368999999999999999999975 499999999999999865
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.9e-16 Score=124.11 Aligned_cols=98 Identities=21% Similarity=0.333 Sum_probs=82.9
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|++.+++.++|+|++ .++||+++|..+ ...+.
T Consensus 89 VnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~---------------- 152 (330)
T PRK06139 89 VNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPY---------------- 152 (330)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCC----------------
Confidence 589986422 2789999999999999999999999965 489999999877 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhcc-ccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC-ELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~-~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++.+|+++|+.|+.+ . ||+|++|+||+|+|++...
T Consensus 153 ---------------------------~~~Y~asKaal~~~~~sL~~El~~~~----gI~V~~v~Pg~v~T~~~~~ 197 (330)
T PRK06139 153 ---------------------------AAAYSASKFGLRGFSEALRGELADHP----DIHVCDVYPAFMDTPGFRH 197 (330)
T ss_pred ---------------------------chhHHHHHHHHHHHHHHHHHHhCCCC----CeEEEEEecCCccCccccc
Confidence 368999999999999999999875 3 7999999999999998653
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-15 Score=117.52 Aligned_cols=93 Identities=16% Similarity=0.089 Sum_probs=78.7
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcccccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAGHLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|.+.+++|+.+++.+++.++|+|++ +|+||++||..+.. .
T Consensus 88 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--~--------------- 150 (227)
T PRK08862 88 VNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ--D--------------- 150 (227)
T ss_pred EECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC--C---------------
Confidence 58887431 12678999999999999999999999964 48999999965432 1
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|+++|+++.+|+|+|+.|+.+. ||+|++|+||+++|+.
T Consensus 151 ----------------------------~~~Y~asKaal~~~~~~la~el~~~----~Irvn~v~PG~i~t~~ 191 (227)
T PRK08862 151 ----------------------------LTGVESSNALVSGFTHSWAKELTPF----NIRVGGVVPSIFSANG 191 (227)
T ss_pred ----------------------------cchhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEecCcCcCCC
Confidence 2679999999999999999999988 9999999999999984
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.2e-16 Score=123.10 Aligned_cols=111 Identities=30% Similarity=0.233 Sum_probs=82.8
Q ss_pred CCCCCCCcc------HHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcccccccccHHHHhhhhccccChHHH
Q psy16223 1 MNRASTVPF------AIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73 (153)
Q Consensus 1 innag~~~~------~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (153)
|||||.... .++++.++++|++|++.+++.++|.|++ .++||++||..+........ ++..
T Consensus 98 i~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~---------~~~~--- 165 (313)
T PRK05854 98 INNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWD---------DLNW--- 165 (313)
T ss_pred EECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcc---------cccc---
Confidence 689997522 2789999999999999999999999965 48999999988732111000 0000
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc--cccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 74 TDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD--CELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~--~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
... +.....|+.||+++.+|++.|++++. .. ||+|++||||+|+|++...
T Consensus 166 ----------------~~~--~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~----gI~v~~v~PG~v~T~~~~~ 217 (313)
T PRK05854 166 ----------------ERS--YAGMRAYSQSKIAVGLFALELDRRSRAAGW----GITSNLAHPGVAPTNLLAA 217 (313)
T ss_pred ----------------ccc--CcchhhhHHHHHHHHHHHHHHHHHhhcCCC----CeEEEEEecceeccCcccc
Confidence 000 11136899999999999999998754 34 7999999999999999754
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.3e-15 Score=120.45 Aligned_cols=96 Identities=30% Similarity=0.336 Sum_probs=77.3
Q ss_pred CCCCCCCcc--------HHHHHHHHhhhhhH-HHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF--------AIQAEKTILTNYLG-LVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~--------~~~~~~~~~vN~~g-~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .+.|++++++|+.| .+.+++.+.|.+++ ++.|+++||..+....
T Consensus 94 vnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~---------------- 157 (270)
T KOG0725|consen 94 VNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG---------------- 157 (270)
T ss_pred EEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC----------------
Confidence 589987632 27899999999996 55555556666654 5789999988773221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCC-chhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
+.. ..|+++|+|+.+++|+++.||.+. |||||+|+||.|.|++
T Consensus 158 --------------------------~~~~~~Y~~sK~al~~ltr~lA~El~~~----gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 158 --------------------------PGSGVAYGVSKAALLQLTRSLAKELAKH----GIRVNSVSPGLVKTSL 201 (270)
T ss_pred --------------------------CCCcccchhHHHHHHHHHHHHHHHHhhc----CcEEEEeecCcEeCCc
Confidence 112 689999999999999999999999 9999999999999998
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-15 Score=119.77 Aligned_cols=98 Identities=23% Similarity=0.198 Sum_probs=83.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|.+ +++||++||..+ ...+.
T Consensus 88 i~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~--------------- 152 (275)
T PRK05876 88 FSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAG--------------- 152 (275)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCC---------------
Confidence 58998642 23789999999999999999999999953 478999999877 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++.+|+++|+.|+... ||+|++|+||+++|++...
T Consensus 153 ----------------------------~~~Y~asK~a~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~ 196 (275)
T PRK05876 153 ----------------------------LGAYGVAKYGVVGLAETLAREVTAD----GIGVSVLCPMVVETNLVAN 196 (275)
T ss_pred ----------------------------CchHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEEeCccccccccc
Confidence 4789999999999999999999887 8999999999999998653
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-15 Score=117.03 Aligned_cols=98 Identities=20% Similarity=0.239 Sum_probs=83.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.+++.+++.+++.|.+ .++||++||..+ ...+.
T Consensus 91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------------- 154 (254)
T PRK08085 91 INNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDT---------------- 154 (254)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCC----------------
Confidence 57888642 23789999999999999999999999954 489999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..++++++.++.++ ||++|+|+||+++|++...
T Consensus 155 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~pG~~~t~~~~~ 198 (254)
T PRK08085 155 ---------------------------ITPYAASKGAVKMLTRGMCVELARH----NIQVNGIAPGYFKTEMTKA 198 (254)
T ss_pred ---------------------------CcchHHHHHHHHHHHHHHHHHHHhh----CeEEEEEEeCCCCCcchhh
Confidence 3689999999999999999999988 9999999999999998764
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-15 Score=118.54 Aligned_cols=88 Identities=19% Similarity=0.190 Sum_probs=77.7
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEH 87 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (153)
++|++++++|+.+++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 124 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------------------------- 170 (278)
T PRK08277 124 EGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTK--------------------------------- 170 (278)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCCC---------------------------------
Confidence 779999999999999999999999954 589999999887 33221
Q ss_pred CCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 88 PRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 88 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..++|+++.++... ||+||+|+||+|+|++.+.
T Consensus 171 ----------~~~Y~~sK~a~~~l~~~la~e~~~~----girvn~v~Pg~v~t~~~~~ 214 (278)
T PRK08277 171 ----------VPAYSAAKAAISNFTQWLAVHFAKV----GIRVNAIAPGFFLTEQNRA 214 (278)
T ss_pred ----------CchhHHHHHHHHHHHHHHHHHhCcc----CeEEEEEEeccCcCcchhh
Confidence 3689999999999999999999988 9999999999999998654
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.4e-15 Score=116.92 Aligned_cols=97 Identities=23% Similarity=0.230 Sum_probs=82.5
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.+++.+++.++|+|.+ .++||++||..+ ...+.
T Consensus 90 v~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~--------------- 154 (261)
T PRK08936 90 INNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPL--------------- 154 (261)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCC---------------
Confidence 578886422 2779999999999999999999999964 489999999776 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++..++++++.++... ||+|++|+||+|+|++..
T Consensus 155 ----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~----gi~v~~v~pg~v~t~~~~ 197 (261)
T PRK08936 155 ----------------------------FVHYAASKGGVKLMTETLAMEYAPK----GIRVNNIGPGAINTPINA 197 (261)
T ss_pred ----------------------------CcccHHHHHHHHHHHHHHHHHHhhc----CeEEEEEEECcCCCCccc
Confidence 3689999999999999999999888 999999999999999865
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4e-15 Score=114.56 Aligned_cols=99 Identities=25% Similarity=0.236 Sum_probs=84.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~------------------ 137 (240)
T PRK06101 76 IFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPR------------------ 137 (240)
T ss_pred EEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCC------------------
Confidence 46777531 23679999999999999999999999988889999999876 43322
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|+++..+++.++.|+... ||++++|+||+|+|++....
T Consensus 138 -------------------------~~~Y~asK~a~~~~~~~l~~e~~~~----gi~v~~v~pg~i~t~~~~~~ 182 (240)
T PRK06101 138 -------------------------AEAYGASKAAVAYFARTLQLDLRPK----GIEVVTVFPGFVATPLTDKN 182 (240)
T ss_pred -------------------------CchhhHHHHHHHHHHHHHHHHHHhc----CceEEEEeCCcCCCCCcCCC
Confidence 3689999999999999999999888 99999999999999987654
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.3e-15 Score=116.19 Aligned_cols=99 Identities=24% Similarity=0.292 Sum_probs=83.5
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||..+ ..++|++++++|+.+++.+++.++|+|++ .++|+++||..+ ...+.
T Consensus 90 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------- 154 (252)
T PRK07035 90 VNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDF--------------- 154 (252)
T ss_pred EECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCC---------------
Confidence 57887532 23779999999999999999999999965 489999999876 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++..++++++.++.++ ||+|++|+||+|+|++....
T Consensus 155 ----------------------------~~~Y~~sK~al~~~~~~l~~e~~~~----gi~v~~i~PG~v~t~~~~~~ 199 (252)
T PRK07035 155 ----------------------------QGIYSITKAAVISMTKAFAKECAPF----GIRVNALLPGLTDTKFASAL 199 (252)
T ss_pred ----------------------------CcchHHHHHHHHHHHHHHHHHHhhc----CEEEEEEeeccccCcccccc
Confidence 3689999999999999999999988 99999999999999987643
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-15 Score=116.23 Aligned_cols=98 Identities=17% Similarity=0.213 Sum_probs=82.5
Q ss_pred CCCCCCC---------ccHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCccc-ccccccHHHHhhhhcccc
Q psy16223 1 MNRASTV---------PFAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGH-LSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~---------~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~ 68 (153)
|||||.. ...++|++++++|+.|++.+++.++|.|++ .++||++||..+. ..+.
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-------------- 147 (260)
T PRK06523 82 VHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPE-------------- 147 (260)
T ss_pred EECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC--------------
Confidence 5888853 123789999999999999999999999965 3789999998763 2110
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....|+++|+++..++++++.++.++ ||++++|+||+|+|++..
T Consensus 148 ----------------------------~~~~Y~~sK~a~~~l~~~~a~~~~~~----gi~v~~i~Pg~v~t~~~~ 191 (260)
T PRK06523 148 ----------------------------STTAYAAAKAALSTYSKSLSKEVAPK----GVRVNTVSPGWIETEAAV 191 (260)
T ss_pred ----------------------------CcchhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEecCcccCccHH
Confidence 13789999999999999999999988 999999999999999864
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.9e-15 Score=117.31 Aligned_cols=98 Identities=20% Similarity=0.300 Sum_probs=83.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.+++.+++.++|+|++ .++||++||..+ .+.+.
T Consensus 96 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 159 (258)
T PRK06935 96 VNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKF---------------- 159 (258)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCC----------------
Confidence 57888642 23689999999999999999999999965 479999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..+++++++|+... ||+|++|+||+|+|++...
T Consensus 160 ---------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~i~PG~v~t~~~~~ 203 (258)
T PRK06935 160 ---------------------------VPAYTASKHGVAGLTKAFANELAAY----NIQVNAIAPGYIKTANTAP 203 (258)
T ss_pred ---------------------------chhhHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEeccccccchhh
Confidence 3689999999999999999999988 9999999999999998654
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.6e-15 Score=120.49 Aligned_cols=132 Identities=20% Similarity=0.228 Sum_probs=83.6
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC----CccEEEecCCcccccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR----HARVVNLSSSAGHLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~----~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||+.. ..++|++++++|+.|++.+++.++|.|++ .++||++||..+...... ....+. +
T Consensus 86 I~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~-~~~~~~-----~ 159 (314)
T TIGR01289 86 VCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLA-GNVPPK-----A 159 (314)
T ss_pred EECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCC-CcCCCc-----c
Confidence 68998742 23789999999999999999999999964 279999999887321000 000000 0
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc-cccCCCCeEEEEeeCCcc-cCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD-CELGNQDKVINAVHPGYV-ATNMSSF 145 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~~~~~gi~v~~v~PG~v-~T~~~~~ 145 (153)
....+..+...+.+.. .........+ ..+|+.||++++.+++.+++++. +. ||+|++|+||+| +|+|.+.
T Consensus 160 ~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~Y~~SK~a~~~~~~~la~~~~~~~----gi~v~~v~PG~v~~T~l~~~ 231 (314)
T TIGR01289 160 NLGDLSGLAAGFKAPI-AMIDGKEFKG--AKAYKDSKVCNMLTVRELHRRFHDET----GITFASLYPGCIADTGLFRE 231 (314)
T ss_pred cccccccccccCCCcc-cccCCCCcch--hhhHHHhHHHHHHHHHHHHHHhccCC----CeEEEEecCCcccCCccccc
Confidence 0000000000000000 0000001112 36899999999999999999985 35 799999999999 6999764
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-15 Score=116.15 Aligned_cols=98 Identities=16% Similarity=0.188 Sum_probs=83.1
Q ss_pred CCCCCCCc------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.++++++|+|.+ .++||++||..+ ...+.
T Consensus 93 i~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------------- 155 (255)
T PRK06113 93 VNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN----------------- 155 (255)
T ss_pred EECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC-----------------
Confidence 57887642 23789999999999999999999999964 479999999877 33221
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++.+++++++.++... ||+|++|+||+++|++...
T Consensus 156 --------------------------~~~Y~~sK~a~~~~~~~la~~~~~~----~i~v~~v~pg~~~t~~~~~ 199 (255)
T PRK06113 156 --------------------------MTSYASSKAAASHLVRNMAFDLGEK----NIRVNGIAPGAILTDALKS 199 (255)
T ss_pred --------------------------cchhHHHHHHHHHHHHHHHHHhhhh----CeEEEEEeccccccccccc
Confidence 3689999999999999999999888 9999999999999998764
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3e-15 Score=115.38 Aligned_cols=100 Identities=30% Similarity=0.370 Sum_probs=85.4
Q ss_pred CCCCCCCcc--------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVPF--------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~~--------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||.... .++|++++++|+.|++.+++.+.|.|++. +||++||..+. ...
T Consensus 91 vnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS~~~~-~~~------------------ 150 (251)
T COG1028 91 VNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISSVAGL-GGP------------------ 150 (251)
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECCchhc-CCC------------------
Confidence 589998532 17899999999999999999888888866 99999999876 322
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
+. ...|++||+|+++|++.++.|+.+. ||++++|+||+++|++.+...
T Consensus 151 ----------------------~~-~~~Y~~sK~al~~~~~~l~~e~~~~----gi~v~~v~PG~~~t~~~~~~~ 198 (251)
T COG1028 151 ----------------------PG-QAAYAASKAALIGLTKALALELAPR----GIRVNAVAPGYIDTPMTAALE 198 (251)
T ss_pred ----------------------CC-cchHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEEeccCCCcchhhhh
Confidence 00 2789999999999999999999888 999999999999999987643
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.1e-15 Score=117.36 Aligned_cols=85 Identities=19% Similarity=0.180 Sum_probs=73.9
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCccc-ccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCC
Q psy16223 12 QAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAGH-LSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPR 89 (153)
Q Consensus 12 ~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
.|++++++|+.+++.+++.++|.|++ +++||+++|..+. ..+.
T Consensus 108 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------------------------------- 152 (263)
T PRK06200 108 AFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGG----------------------------------- 152 (263)
T ss_pred HHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC-----------------------------------
Confidence 38999999999999999999999964 6899999998763 2211
Q ss_pred ccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 90 AHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 90 ~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..++++++.++.+ +|+||+|+||+|+|+|..
T Consensus 153 --------~~~Y~~sK~a~~~~~~~la~el~~-----~Irvn~i~PG~i~t~~~~ 194 (263)
T PRK06200 153 --------GPLYTASKHAVVGLVRQLAYELAP-----KIRVNGVAPGGTVTDLRG 194 (263)
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHhc-----CcEEEEEeCCccccCCcC
Confidence 368999999999999999999965 599999999999999864
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.5e-15 Score=115.66 Aligned_cols=99 Identities=20% Similarity=0.264 Sum_probs=83.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCccc-ccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAGH-LSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.+++.+++.++|.|.+ .++||++||..+. ..+.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------- 149 (248)
T TIGR01832 85 VNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR--------------- 149 (248)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCC---------------
Confidence 588887532 3689999999999999999999999854 4799999997763 2211
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|+++..++++++.++.++ ||+|++|+||+|+|++.+..
T Consensus 150 ----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~----gi~v~~v~pg~v~t~~~~~~ 194 (248)
T TIGR01832 150 ----------------------------VPSYTASKHGVAGLTKLLANEWAAK----GINVNAIAPGYMATNNTQAL 194 (248)
T ss_pred ----------------------------CchhHHHHHHHHHHHHHHHHHhCcc----CcEEEEEEECcCcCcchhcc
Confidence 3679999999999999999999888 99999999999999987643
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.6e-15 Score=116.97 Aligned_cols=97 Identities=24% Similarity=0.131 Sum_probs=82.5
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|++.+++.++|.|.+ .|+|++++|..+ ...+.
T Consensus 99 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-------------- 164 (280)
T PLN02253 99 VNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG-------------- 164 (280)
T ss_pred EECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC--------------
Confidence 58888642 13789999999999999999999999954 589999999887 43221
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+... ||+|++|+||+++|++..
T Consensus 165 -----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~i~pg~v~t~~~~ 207 (280)
T PLN02253 165 -----------------------------PHAYTGSKHAVLGLTRSVAAELGKH----GIRVNCVSPYAVPTALAL 207 (280)
T ss_pred -----------------------------CcccHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcccccccc
Confidence 3689999999999999999999988 999999999999999754
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.6e-15 Score=116.19 Aligned_cols=99 Identities=28% Similarity=0.357 Sum_probs=84.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCC-ccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRH-ARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~-g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..+++++++++|+.|++.+++.++|.|+++ ++||++||..+ ...+.
T Consensus 77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------- 139 (274)
T PRK05693 77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPF----------------- 139 (274)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCC-----------------
Confidence 58888642 237899999999999999999999999764 89999999887 33221
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|+++..++++++.|+.+. ||+|++|+||+|+|++....
T Consensus 140 --------------------------~~~Y~~sK~al~~~~~~l~~e~~~~----gi~v~~v~pg~v~t~~~~~~ 184 (274)
T PRK05693 140 --------------------------AGAYCASKAAVHALSDALRLELAPF----GVQVMEVQPGAIASQFASNA 184 (274)
T ss_pred --------------------------ccHHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEecCcccccccccc
Confidence 3689999999999999999999888 99999999999999987654
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.8e-15 Score=112.87 Aligned_cols=105 Identities=22% Similarity=0.246 Sum_probs=82.2
Q ss_pred CCCCCCCcc-------------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhc
Q psy16223 1 MNRASTVPF-------------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLME 65 (153)
Q Consensus 1 innag~~~~-------------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~ 65 (153)
|||||.... .+.|++.+++|+.+++.+++.++|.|++ .++|+++||..+.....
T Consensus 72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~----------- 140 (235)
T PRK09009 72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDN----------- 140 (235)
T ss_pred EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccC-----------
Confidence 588887521 1568899999999999999999999965 37899999866521100
Q ss_pred cccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...+ ...|+++|+++..|+++|+.|+... . .||+|++|+||+|+|+|...
T Consensus 141 --------------------------~~~~--~~~Y~asK~a~~~~~~~la~e~~~~-~-~~i~v~~v~PG~v~t~~~~~ 190 (235)
T PRK09009 141 --------------------------RLGG--WYSYRASKAALNMFLKTLSIEWQRS-L-KHGVVLALHPGTTDTALSKP 190 (235)
T ss_pred --------------------------CCCC--cchhhhhHHHHHHHHHHHHHHhhcc-c-CCeEEEEEcccceecCCCcc
Confidence 0012 3689999999999999999998752 1 17999999999999999865
Q ss_pred C
Q psy16223 146 M 146 (153)
Q Consensus 146 ~ 146 (153)
.
T Consensus 191 ~ 191 (235)
T PRK09009 191 F 191 (235)
T ss_pred h
Confidence 4
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.4e-15 Score=115.73 Aligned_cols=95 Identities=25% Similarity=0.274 Sum_probs=80.3
Q ss_pred CCCCCCC----c----cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTV----P----FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~----~----~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.. + ..++|++.+++|+.+++.+++.++|.|++ .++||++||..+...
T Consensus 89 v~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------------ 150 (260)
T PRK12823 89 INNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------------------ 150 (260)
T ss_pred EECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC------------------
Confidence 5888853 1 12679999999999999999999999964 379999999765321
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
....|++||+++..|+++++.++.+. ||+|++|+||+|+|++.
T Consensus 151 --------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~ 193 (260)
T PRK12823 151 --------------------------NRVPYSAAKGGVNALTASLAFEYAEH----GIRVNAVAPGGTEAPPR 193 (260)
T ss_pred --------------------------CCCccHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCccCCcch
Confidence 13679999999999999999999888 99999999999999863
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.1e-15 Score=115.24 Aligned_cols=99 Identities=24% Similarity=0.225 Sum_probs=85.5
Q ss_pred CCCCCCCcc----------HHHHHHHHhhhhhHHHHHHHHHhhhhcCC---ccEEEecCCcc-cccccccHHHHhhhhcc
Q psy16223 1 MNRASTVPF----------AIQAEKTILTNYLGLVRTCVFLFPLLRRH---ARVVNLSSSAG-HLSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~~----------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~---g~iv~~sS~~~-~~~~~~~~~~~~~~~~~ 66 (153)
|||||...+ .++|++-+++|+++.+.+.+.++|.++.. +.+|++||... ..+..
T Consensus 87 I~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~------------ 154 (253)
T KOG1204|consen 87 IHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSS------------ 154 (253)
T ss_pred EecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccH------------
Confidence 699998633 27899999999999999999999999764 89999999888 54332
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
+.+|+.+|+|.++|.+.|+.|-. . ++++.++.||.|||+|....
T Consensus 155 -------------------------------wa~yc~~KaAr~m~f~~lA~EEp-~----~v~vl~~aPGvvDT~mq~~i 198 (253)
T KOG1204|consen 155 -------------------------------WAAYCSSKAARNMYFMVLASEEP-F----DVRVLNYAPGVVDTQMQVCI 198 (253)
T ss_pred -------------------------------HHHhhhhHHHHHHHHHHHhhcCc-c----ceeEEEccCCcccchhHHHH
Confidence 37899999999999999998876 5 79999999999999998654
Q ss_pred C
Q psy16223 147 G 147 (153)
Q Consensus 147 ~ 147 (153)
.
T Consensus 199 r 199 (253)
T KOG1204|consen 199 R 199 (253)
T ss_pred h
Confidence 4
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.4e-15 Score=116.38 Aligned_cols=98 Identities=22% Similarity=0.308 Sum_probs=83.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|+|++ .++||++||..+ ...+.
T Consensus 92 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 155 (265)
T PRK07097 92 VNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRET---------------- 155 (265)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCC----------------
Confidence 57888742 23789999999999999999999999964 489999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..++++++.++.+. ||+|++|+||+++|++...
T Consensus 156 ---------------------------~~~Y~~sKaal~~l~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 199 (265)
T PRK07097 156 ---------------------------VSAYAAAKGGLKMLTKNIASEYGEA----NIQCNGIGPGYIATPQTAP 199 (265)
T ss_pred ---------------------------CccHHHHHHHHHHHHHHHHHHhhhc----CceEEEEEeccccccchhh
Confidence 3789999999999999999999988 9999999999999998654
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.6e-15 Score=115.14 Aligned_cols=99 Identities=25% Similarity=0.225 Sum_probs=83.8
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||+|... ..++|++++++|+.+++.+++.++|.|.+ .++||++||..+ ...+.
T Consensus 89 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--------------- 153 (253)
T PRK06172 89 FNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPK--------------- 153 (253)
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC---------------
Confidence 57888631 23789999999999999999999999954 479999999877 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|+++..|+++++.++... ||+|++|+||+|+|++....
T Consensus 154 ----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~----~i~v~~i~PG~v~t~~~~~~ 198 (253)
T PRK06172 154 ----------------------------MSIYAASKHAVIGLTKSAAIEYAKK----GIRVNAVCPAVIDTDMFRRA 198 (253)
T ss_pred ----------------------------CchhHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeCCccChhhhhh
Confidence 3789999999999999999999887 89999999999999997754
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.9e-15 Score=113.49 Aligned_cols=104 Identities=22% Similarity=0.226 Sum_probs=84.3
Q ss_pred CCCCCCCcc---------HHHHHHHHhhhhhHHHHHHHHHhhhhcCC-ccEEEecCCccc-ccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF---------AIQAEKTILTNYLGLVRTCVFLFPLLRRH-ARVVNLSSSAGH-LSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~---------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~-g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .+++++++++|+.+++.+++.++|.|+++ ++++++||..+. ..+.
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~--------------- 140 (225)
T PRK08177 76 FVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPD--------------- 140 (225)
T ss_pred EEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCC---------------
Confidence 477776421 26799999999999999999999999775 889999987763 2111
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMGN 148 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~~ 148 (153)
..+ ...|+++|+++..+++.++.++.++ ||+|++|+||+++|+|.....+
T Consensus 141 -----------------------~~~--~~~Y~~sK~a~~~~~~~l~~e~~~~----~i~v~~i~PG~i~t~~~~~~~~ 190 (225)
T PRK08177 141 -----------------------GGE--MPLYKASKAALNSMTRSFVAELGEP----TLTVLSMHPGWVKTDMGGDNAP 190 (225)
T ss_pred -----------------------CCC--ccchHHHHHHHHHHHHHHHHHhhcC----CeEEEEEcCCceecCCCCCCCC
Confidence 001 3579999999999999999999887 8999999999999999876543
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5e-15 Score=115.78 Aligned_cols=99 Identities=21% Similarity=0.228 Sum_probs=84.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+.+++++++|+.|++.+++.++|.|.+ .++||++||..+ ...+.
T Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 146 (273)
T PRK07825 83 VNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPG---------------- 146 (273)
T ss_pred EECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCC----------------
Confidence 58888743 23679999999999999999999999965 479999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++..|+++++.++.+. ||++++|+||+++|++....
T Consensus 147 ---------------------------~~~Y~asKaa~~~~~~~l~~el~~~----gi~v~~v~Pg~v~t~~~~~~ 191 (273)
T PRK07825 147 ---------------------------MATYCASKHAVVGFTDAARLELRGT----GVHVSVVLPSFVNTELIAGT 191 (273)
T ss_pred ---------------------------CcchHHHHHHHHHHHHHHHHHhhcc----CcEEEEEeCCcCcchhhccc
Confidence 4789999999999999999999888 99999999999999987654
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.8e-15 Score=114.97 Aligned_cols=97 Identities=25% Similarity=0.219 Sum_probs=80.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEe-cCCcccccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNL-SSSAGHLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~-sS~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++++++ ||..+...+.
T Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~------------------ 155 (257)
T PRK12744 94 INTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPF------------------ 155 (257)
T ss_pred EECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCC------------------
Confidence 57888631 236899999999999999999999999888888876 4444432221
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..++++++.|+.+. ||+|++|+||+++|++..
T Consensus 156 -------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~v~pg~v~t~~~~ 198 (257)
T PRK12744 156 -------------------------YSAYAGSKAPVEHFTRAASKEFGAR----GISVTAVGPGPMDTPFFY 198 (257)
T ss_pred -------------------------cccchhhHHHHHHHHHHHHHHhCcC----ceEEEEEecCccccchhc
Confidence 3689999999999999999999987 899999999999999764
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.9e-15 Score=115.21 Aligned_cols=98 Identities=22% Similarity=0.167 Sum_probs=82.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.+++.+++.++|.|++ .++|++++|..+ ...+.
T Consensus 102 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~--------------- 166 (262)
T PRK07831 102 VNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHG--------------- 166 (262)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC---------------
Confidence 57888642 22789999999999999999999999954 479999999776 32211
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++++++++++.|+.++ ||+|++|+||+++|++...
T Consensus 167 ----------------------------~~~Y~~sKaal~~~~~~la~e~~~~----gI~v~~i~Pg~~~t~~~~~ 210 (262)
T PRK07831 167 ----------------------------QAHYAAAKAGVMALTRCSALEAAEY----GVRINAVAPSIAMHPFLAK 210 (262)
T ss_pred ----------------------------CcchHHHHHHHHHHHHHHHHHhCcc----CeEEEEEeeCCccCccccc
Confidence 3689999999999999999999988 9999999999999998653
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.2e-15 Score=114.96 Aligned_cols=98 Identities=24% Similarity=0.259 Sum_probs=83.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||..+. .++|++++++|+.+++.+++.+++.|++ +++||++||..+ .+.+.
T Consensus 84 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------- 148 (256)
T PRK08643 84 VNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE--------------- 148 (256)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC---------------
Confidence 588886432 3679999999999999999999999854 479999999877 43221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..+++.++.++.+. ||+|++|+||+++|++...
T Consensus 149 ----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~i~Pg~v~t~~~~~ 192 (256)
T PRK08643 149 ----------------------------LAVYSSTKFAVRGLTQTAARDLASE----GITVNAYAPGIVKTPMMFD 192 (256)
T ss_pred ----------------------------CchhHHHHHHHHHHHHHHHHHhccc----CcEEEEEeeCCCcChhhhH
Confidence 3689999999999999999999888 9999999999999998653
|
|
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.7e-16 Score=114.23 Aligned_cols=99 Identities=22% Similarity=0.313 Sum_probs=83.5
Q ss_pred CCCCCCC---ccH----HHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTV---PFA----IQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~---~~~----~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
+||||+. ++. +.++++|+||+.+.+.+++.+.+.+-+ .|.||++||... +....
T Consensus 82 VNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~n--------------- 146 (245)
T KOG1207|consen 82 VNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDN--------------- 146 (245)
T ss_pred hccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCC---------------
Confidence 5899985 333 679999999999999999996665532 366999999887 43221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|+|+.+++|+|+.|+.++ +||||+|.|-.|.|+|.++.
T Consensus 147 ----------------------------HtvYcatKaALDmlTk~lAlELGp~----kIRVNsVNPTVVmT~MG~dn 191 (245)
T KOG1207|consen 147 ----------------------------HTVYCATKAALDMLTKCLALELGPQ----KIRVNSVNPTVVMTDMGRDN 191 (245)
T ss_pred ----------------------------ceEEeecHHHHHHHHHHHHHhhCcc----eeEeeccCCeEEEecccccc
Confidence 4899999999999999999999988 89999999999999999864
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-14 Score=113.28 Aligned_cols=99 Identities=21% Similarity=0.250 Sum_probs=84.0
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ .+.+.
T Consensus 83 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~--------------- 147 (257)
T PRK07024 83 IANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPG--------------- 147 (257)
T ss_pred EECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC---------------
Confidence 58888642 22679999999999999999999999954 489999999887 44332
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++..++++++.|+... ||++++|+||+|+|++....
T Consensus 148 ----------------------------~~~Y~asK~a~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~~ 192 (257)
T PRK07024 148 ----------------------------AGAYSASKAAAIKYLESLRVELRPA----GVRVVTIAPGYIRTPMTAHN 192 (257)
T ss_pred ----------------------------CcchHHHHHHHHHHHHHHHHHhhcc----CcEEEEEecCCCcCchhhcC
Confidence 3689999999999999999999888 99999999999999987543
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.7e-15 Score=115.17 Aligned_cols=96 Identities=19% Similarity=0.286 Sum_probs=82.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|+.++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~---------------- 142 (273)
T PRK06182 79 VNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPL---------------- 142 (273)
T ss_pred EECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCC----------------
Confidence 58888753 23689999999999999999999999965 379999999776 32221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|+++|+++..++++++.|+.+. ||++++|+||+++|++.
T Consensus 143 ---------------------------~~~Y~~sKaa~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~ 184 (273)
T PRK06182 143 ---------------------------GAWYHATKFALEGFSDALRLEVAPF----GIDVVVIEPGGIKTEWG 184 (273)
T ss_pred ---------------------------ccHhHHHHHHHHHHHHHHHHHhccc----CCEEEEEecCCcccccc
Confidence 3579999999999999999999887 99999999999999985
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.9e-15 Score=113.63 Aligned_cols=99 Identities=22% Similarity=0.284 Sum_probs=83.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.+++.+++.++|+|++ .++||++||..+ ...+.
T Consensus 93 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---------------- 156 (257)
T PRK09242 93 VNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRS---------------- 156 (257)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCC----------------
Confidence 47787631 23789999999999999999999999954 489999999877 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|.++..++++++.++.+. ||++++|+||+++|++....
T Consensus 157 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~i~Pg~i~t~~~~~~ 201 (257)
T PRK09242 157 ---------------------------GAPYGMTKAALLQMTRNLAVEWAED----GIRVNAVAPWYIRTPLTSGP 201 (257)
T ss_pred ---------------------------CcchHHHHHHHHHHHHHHHHHHHHh----CeEEEEEEECCCCCcccccc
Confidence 3689999999999999999999888 89999999999999997644
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.6e-15 Score=113.87 Aligned_cols=94 Identities=16% Similarity=0.082 Sum_probs=78.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCccc-ccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAGH-LSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|+|.+ .++||++||..+. ..+.
T Consensus 83 I~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------- 147 (252)
T PRK07677 83 INNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG--------------- 147 (252)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCC---------------
Confidence 57887532 23779999999999999999999999843 4899999998773 2211
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhcc-ccCCCCeEEEEeeCCcccCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC-ELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~-~~~~~gi~v~~v~PG~v~T~ 141 (153)
...|++||+++.+|+++|+.++.+ . ||+|++|+||+|+|+
T Consensus 148 ----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~~----gi~v~~v~PG~v~~~ 188 (252)
T PRK07677 148 ----------------------------VIHSAAAKAGVLAMTRTLAVEWGRKY----GIRVNAIAPGPIERT 188 (252)
T ss_pred ----------------------------CcchHHHHHHHHHHHHHHHHHhCccc----CeEEEEEeecccccc
Confidence 368999999999999999999864 5 899999999999964
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-14 Score=113.42 Aligned_cols=87 Identities=25% Similarity=0.319 Sum_probs=75.9
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhc
Q psy16223 10 AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKE 86 (153)
Q Consensus 10 ~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (153)
.++|++++++|+.|++.+++.++++|++ .++||++||..+ ...+.
T Consensus 107 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------------------------- 154 (266)
T PRK06171 107 EAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG-------------------------------- 154 (266)
T ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC--------------------------------
Confidence 3789999999999999999999999964 479999999887 33221
Q ss_pred CCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCccc-CCCC
Q psy16223 87 HPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVA-TNMS 143 (153)
Q Consensus 87 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~-T~~~ 143 (153)
...|+++|+++..++++++.++.+. ||+||+|+||+++ |++.
T Consensus 155 -----------~~~Y~~sK~a~~~l~~~la~e~~~~----gi~v~~v~pG~~~~t~~~ 197 (266)
T PRK06171 155 -----------QSCYAATKAALNSFTRSWAKELGKH----NIRVVGVAPGILEATGLR 197 (266)
T ss_pred -----------CchhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeccccccCCCc
Confidence 3789999999999999999999988 9999999999997 6664
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.9e-15 Score=113.24 Aligned_cols=98 Identities=26% Similarity=0.237 Sum_probs=83.2
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.+.|.|++ .++||++||..+ .+.+.
T Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------- 157 (255)
T PRK06841 94 VNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALER---------------- 157 (255)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCC----------------
Confidence 57888642 23679999999999999999999999965 479999999876 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|+++..++++++.++.++ ||+|++|+||+|+|++...
T Consensus 158 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~pg~v~t~~~~~ 201 (255)
T PRK06841 158 ---------------------------HVAYCASKAGVVGMTKVLALEWGPY----GITVNAISPTVVLTELGKK 201 (255)
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHHHhh----CeEEEEEEeCcCcCccccc
Confidence 3789999999999999999999988 9999999999999998653
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.1e-15 Score=124.66 Aligned_cols=98 Identities=29% Similarity=0.291 Sum_probs=83.5
Q ss_pred CCCCCCC---------ccHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccc
Q psy16223 1 MNRASTV---------PFAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDC 67 (153)
Q Consensus 1 innag~~---------~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~ 67 (153)
|||||.. ...++|++++++|+.+++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~------------- 150 (520)
T PRK06484 84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPK------------- 150 (520)
T ss_pred EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCC-------------
Confidence 5899862 123789999999999999999999999953 349999999887 43322
Q ss_pred cChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..|+++++.|+.+. ||+|++|+||+|+|++...
T Consensus 151 ------------------------------~~~Y~asKaal~~l~~~la~e~~~~----~i~v~~i~Pg~v~t~~~~~ 194 (520)
T PRK06484 151 ------------------------------RTAYSASKAAVISLTRSLACEWAAK----GIRVNAVLPGYVRTQMVAE 194 (520)
T ss_pred ------------------------------CchHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEccCCcCchhhhh
Confidence 3689999999999999999999988 9999999999999998754
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.5e-15 Score=117.96 Aligned_cols=111 Identities=28% Similarity=0.244 Sum_probs=83.8
Q ss_pred CCCCCCCcc-----HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccChHHH
Q psy16223 1 MNRASTVPF-----AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73 (153)
Q Consensus 1 innag~~~~-----~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (153)
|||||.... .++|+.++++|+.|++.+++.++|.|++ +++||++||..+...+.... +..
T Consensus 104 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~---------~~~---- 170 (315)
T PRK06196 104 INNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWD---------DPH---- 170 (315)
T ss_pred EECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCcc---------ccC----
Confidence 589987422 2679999999999999999999999965 37999999976532111000 000
Q ss_pred HHHHHHHHHHhhcCCCccccCCC-CCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 74 TDMMYEFMDITKEHPRAHVAKGW-PDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
. ..++ ....|+.||+++..+++.++.++... ||++++|+||+|+|++.+..
T Consensus 171 ---------------~---~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~----gi~v~~v~PG~v~t~~~~~~ 222 (315)
T PRK06196 171 ---------------F---TRGYDKWLAYGQSKTANALFAVHLDKLGKDQ----GVRAFSVHPGGILTPLQRHL 222 (315)
T ss_pred ---------------c---cCCCChHHHHHHHHHHHHHHHHHHHHHhcCC----CcEEEEeeCCcccCCccccC
Confidence 0 0011 13679999999999999999999887 89999999999999987654
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1e-14 Score=113.16 Aligned_cols=98 Identities=21% Similarity=0.209 Sum_probs=82.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.+++.+++.+.++|.+ +++||++||..+ ...+.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~--------------- 149 (256)
T PRK12743 85 VNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPG--------------- 149 (256)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCC---------------
Confidence 47787642 23789999999999999999999999954 479999999776 33211
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..++++++.++..+ ||++++|+||+++|++.+.
T Consensus 150 ----------------------------~~~Y~~sK~a~~~l~~~la~~~~~~----~i~v~~v~Pg~~~t~~~~~ 193 (256)
T PRK12743 150 ----------------------------ASAYTAAKHALGGLTKAMALELVEH----GILVNAVAPGAIATPMNGM 193 (256)
T ss_pred ----------------------------cchhHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEeCCccCccccc
Confidence 3789999999999999999999988 9999999999999998754
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1e-14 Score=111.31 Aligned_cols=97 Identities=19% Similarity=0.176 Sum_probs=82.3
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------- 136 (235)
T PRK06550 72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGG--------------- 136 (235)
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC---------------
Confidence 57888531 13689999999999999999999999954 479999999877 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+.+|+++..++++++.++.+. ||++++|+||+++|++..
T Consensus 137 ----------------------------~~~Y~~sK~a~~~~~~~la~~~~~~----gi~v~~v~pg~v~t~~~~ 179 (235)
T PRK06550 137 ----------------------------GAAYTASKHALAGFTKQLALDYAKD----GIQVFGIAPGAVKTPMTA 179 (235)
T ss_pred ----------------------------CcccHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCCccCcccc
Confidence 3689999999999999999999887 899999999999999865
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.5e-14 Score=110.87 Aligned_cols=100 Identities=19% Similarity=0.217 Sum_probs=81.8
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|.+ .+++|+++|..+ ...+.
T Consensus 92 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------- 156 (239)
T PRK08703 92 VHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAY--------------- 156 (239)
T ss_pred EEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCC---------------
Confidence 47887531 12679999999999999999999999964 479999999776 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.+++.++.++... + +|+|++|+||+|+|++....
T Consensus 157 ----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~-~--~i~v~~v~pG~v~t~~~~~~ 202 (239)
T PRK08703 157 ----------------------------WGGFGASKAALNYLCKVAADEWERF-G--NLRANVLVPGPINSPQRIKS 202 (239)
T ss_pred ----------------------------ccchHHhHHHHHHHHHHHHHHhccC-C--CeEEEEEecCcccCcccccc
Confidence 3689999999999999999999764 1 59999999999999986643
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.3e-14 Score=113.44 Aligned_cols=99 Identities=27% Similarity=0.423 Sum_probs=84.4
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.+++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 82 I~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~---------------- 145 (270)
T PRK05650 82 VNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPA---------------- 145 (270)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCC----------------
Confidence 588887532 2679999999999999999999999965 379999999877 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|+++.+++++++.|+... ||++++|+||+++|++....
T Consensus 146 ---------------------------~~~Y~~sKaa~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~~ 190 (270)
T PRK05650 146 ---------------------------MSSYNVAKAGVVALSETLLVELADD----EIGVHVVCPSFFQTNLLDSF 190 (270)
T ss_pred ---------------------------chHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCccccCccccc
Confidence 4789999999999999999999887 89999999999999987654
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1e-14 Score=116.65 Aligned_cols=97 Identities=23% Similarity=0.166 Sum_probs=81.4
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---------CccEEEecCCcc-cccccccHHHHhhh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---------HARVVNLSSSAG-HLSQITNLELKKRL 63 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---------~g~iv~~sS~~~-~~~~~~~~~~~~~~ 63 (153)
|||||.... .++|++++++|+.|++.+++.++|+|++ .|+||++||..+ ...+.
T Consensus 94 i~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 164 (306)
T PRK07792 94 VNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVG--------- 164 (306)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCC---------
Confidence 589987532 3789999999999999999999999853 269999999877 33221
Q ss_pred hccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 64 MEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|+++|+++..+++.++.++.+. ||+||+|+|| +.|+|.
T Consensus 165 ----------------------------------~~~Y~asKaal~~l~~~la~e~~~~----gI~vn~i~Pg-~~t~~~ 205 (306)
T PRK07792 165 ----------------------------------QANYGAAKAGITALTLSAARALGRY----GVRANAICPR-ARTAMT 205 (306)
T ss_pred ----------------------------------CchHHHHHHHHHHHHHHHHHHhhhc----CeEEEEECCC-CCCchh
Confidence 3689999999999999999999888 9999999999 488886
Q ss_pred CC
Q psy16223 144 SF 145 (153)
Q Consensus 144 ~~ 145 (153)
..
T Consensus 206 ~~ 207 (306)
T PRK07792 206 AD 207 (306)
T ss_pred hh
Confidence 53
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-14 Score=111.48 Aligned_cols=94 Identities=19% Similarity=0.186 Sum_probs=78.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC----CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR----HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.+++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 79 v~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~-------------- 144 (236)
T PRK06483 79 IHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDK-------------- 144 (236)
T ss_pred EECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCC--------------
Confidence 57888631 23789999999999999999999999965 368999999776 33221
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|++||+++..++++++.|+.+ +|+||+|+||+|.|+.
T Consensus 145 -----------------------------~~~Y~asKaal~~l~~~~a~e~~~-----~irvn~v~Pg~~~~~~ 184 (236)
T PRK06483 145 -----------------------------HIAYAASKAALDNMTLSFAAKLAP-----EVKVNSIAPALILFNE 184 (236)
T ss_pred -----------------------------CccHHHHHHHHHHHHHHHHHHHCC-----CcEEEEEccCceecCC
Confidence 378999999999999999999965 5999999999998864
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.6e-14 Score=110.70 Aligned_cols=96 Identities=29% Similarity=0.273 Sum_probs=82.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+.+++||++||..+ ...+.
T Consensus 88 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------------------ 149 (245)
T PRK12937 88 VNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPG------------------ 149 (245)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCC------------------
Confidence 57888642 23679999999999999999999999988899999999776 33222
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|+.+|+++..++++++.++... |+++++|+||+++|+|.
T Consensus 150 -------------------------~~~Y~~sK~a~~~~~~~~a~~~~~~----~i~v~~i~pg~~~t~~~ 191 (245)
T PRK12937 150 -------------------------YGPYAASKAAVEGLVHVLANELRGR----GITVNAVAPGPVATELF 191 (245)
T ss_pred -------------------------CchhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeCCccCchh
Confidence 3689999999999999999999887 89999999999999985
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-14 Score=112.58 Aligned_cols=100 Identities=22% Similarity=0.220 Sum_probs=81.9
Q ss_pred CCCCCCCccH-------HHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPFA-------IQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~~-------~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||+|..... +..++++++|+.+++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 92 i~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~---------------- 155 (253)
T PRK07904 92 IVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRS---------------- 155 (253)
T ss_pred EEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCC----------------
Confidence 4677765221 233468999999999999999999965 489999999876 32211
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||+++..|+++++.|+... ||++++|+||+++|++.....
T Consensus 156 ---------------------------~~~Y~~sKaa~~~~~~~l~~el~~~----~i~v~~v~Pg~v~t~~~~~~~ 201 (253)
T PRK07904 156 ---------------------------NFVYGSTKAGLDGFYLGLGEALREY----GVRVLVVRPGQVRTRMSAHAK 201 (253)
T ss_pred ---------------------------CcchHHHHHHHHHHHHHHHHHHhhc----CCEEEEEeeCceecchhccCC
Confidence 3679999999999999999999988 999999999999999887653
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-14 Score=111.00 Aligned_cols=87 Identities=20% Similarity=0.219 Sum_probs=75.3
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCccc-ccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGH-LSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEH 87 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (153)
++|++++++|+.+++.+++.++|.|.. .++||++||..+. ...
T Consensus 109 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------------------------------- 154 (253)
T PRK08642 109 EDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVV---------------------------------- 154 (253)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC----------------------------------
Confidence 779999999999999999999999954 4899999997652 211
Q ss_pred CCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 88 PRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 88 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
+...|+++|++++.+++++++++... ||+||+|+||+++|++..
T Consensus 155 ---------~~~~Y~~sK~a~~~l~~~la~~~~~~----~i~v~~i~pG~v~t~~~~ 198 (253)
T PRK08642 155 ---------PYHDYTTAKAALLGLTRNLAAELGPY----GITVNMVSGGLLRTTDAS 198 (253)
T ss_pred ---------CccchHHHHHHHHHHHHHHHHHhCcc----CeEEEEEeecccCCchhh
Confidence 13689999999999999999999888 999999999999998654
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-14 Score=114.34 Aligned_cols=98 Identities=23% Similarity=0.243 Sum_probs=83.7
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.+++.+++.+++.|+++++||++||..+ ...+.
T Consensus 129 I~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~----------------- 191 (290)
T PRK06701 129 VNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET----------------- 191 (290)
T ss_pred EECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC-----------------
Confidence 57888631 22689999999999999999999999988889999999877 33221
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..++++++.++.+. ||+|++|+||+|+|++...
T Consensus 192 --------------------------~~~Y~~sK~a~~~l~~~la~~~~~~----gIrv~~i~pG~v~T~~~~~ 235 (290)
T PRK06701 192 --------------------------LIDYSATKGAIHAFTRSLAQSLVQK----GIRVNAVAPGPIWTPLIPS 235 (290)
T ss_pred --------------------------cchhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCCCCCccccc
Confidence 3679999999999999999999888 9999999999999998653
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.1e-14 Score=111.87 Aligned_cols=98 Identities=20% Similarity=0.203 Sum_probs=83.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .+.|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~---------------- 146 (277)
T PRK06180 83 VNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPG---------------- 146 (277)
T ss_pred EECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCC----------------
Confidence 588887532 2679999999999999999999999965 479999999877 43222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|++++.++++++.++... |+++++|+||+++|++...
T Consensus 147 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~i~Pg~v~t~~~~~ 190 (277)
T PRK06180 147 ---------------------------IGYYCGSKFALEGISESLAKEVAPF----GIHVTAVEPGSFRTDWAGR 190 (277)
T ss_pred ---------------------------cchhHHHHHHHHHHHHHHHHHhhhh----CcEEEEEecCCcccCcccc
Confidence 4789999999999999999999887 8999999999999997543
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.4e-14 Score=112.14 Aligned_cols=98 Identities=24% Similarity=0.292 Sum_probs=82.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||+|... ..++|+.++++|+.|++.+++.++|.|.. +++||++||..+ .+.+.
T Consensus 83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~--------------- 147 (272)
T PRK07832 83 MNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPW--------------- 147 (272)
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCC---------------
Confidence 57887642 23789999999999999999999999943 489999999876 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++.+++++++.|+... ||+|++|+||+++|++...
T Consensus 148 ----------------------------~~~Y~~sK~a~~~~~~~l~~e~~~~----~i~v~~v~Pg~v~t~~~~~ 191 (272)
T PRK07832 148 ----------------------------HAAYSASKFGLRGLSEVLRFDLARH----GIGVSVVVPGAVKTPLVNT 191 (272)
T ss_pred ----------------------------CcchHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCcccCcchhc
Confidence 3689999999999999999999887 8999999999999998764
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.3e-14 Score=114.02 Aligned_cols=98 Identities=20% Similarity=0.195 Sum_probs=82.1
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccc--cccccHHHHhhhhccc
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHL--SQITNLELKKRLMEDC 67 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~--~~~~~~~~~~~~~~~~ 67 (153)
|||||... ..++++.++++|+.|++.+++.++|.|++ .++||++||..+.. .+.
T Consensus 122 i~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~------------- 188 (293)
T PRK05866 122 INNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPL------------- 188 (293)
T ss_pred EECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCC-------------
Confidence 58888642 12567899999999999999999999965 48999999965422 111
Q ss_pred cChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++.+++++++.|+... ||+|++|+||+|+|+|...
T Consensus 189 ------------------------------~~~Y~asKaal~~l~~~la~e~~~~----gI~v~~v~pg~v~T~~~~~ 232 (293)
T PRK05866 189 ------------------------------FSVYNASKAALSAVSRVIETEWGDR----GVHSTTLYYPLVATPMIAP 232 (293)
T ss_pred ------------------------------cchHHHHHHHHHHHHHHHHHHhccc----CcEEEEEEcCcccCccccc
Confidence 3689999999999999999999988 9999999999999999864
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.6e-14 Score=111.46 Aligned_cols=99 Identities=25% Similarity=0.298 Sum_probs=84.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+++++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------------- 141 (270)
T PRK06179 78 VNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPY---------------- 141 (270)
T ss_pred EECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCC----------------
Confidence 58888753 23679999999999999999999999965 489999999877 33222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|+++..+++.++.|+... ||++++|+||+++|++....
T Consensus 142 ---------------------------~~~Y~~sK~a~~~~~~~l~~el~~~----gi~v~~v~pg~~~t~~~~~~ 186 (270)
T PRK06179 142 ---------------------------MALYAASKHAVEGYSESLDHEVRQF----GIRVSLVEPAYTKTNFDANA 186 (270)
T ss_pred ---------------------------ccHHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEeCCCccccccccc
Confidence 4689999999999999999999888 99999999999999987643
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.4e-14 Score=113.73 Aligned_cols=100 Identities=21% Similarity=0.251 Sum_probs=81.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++|+++||..+ .....
T Consensus 95 i~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~---------------- 158 (273)
T PRK08278 95 VNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWF---------------- 158 (273)
T ss_pred EECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccccc----------------
Confidence 57888642 22679999999999999999999999965 479999998765 22100
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCC-cccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPG-YVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG-~v~T~~~~~ 145 (153)
++ ...|++||++++.++++++.|+.++ ||+|++|+|| +++|++.+.
T Consensus 159 -----------------------~~--~~~Y~~sK~a~~~~~~~la~el~~~----~I~v~~i~Pg~~i~t~~~~~ 205 (273)
T PRK08278 159 -----------------------AP--HTAYTMAKYGMSLCTLGLAEEFRDD----GIAVNALWPRTTIATAAVRN 205 (273)
T ss_pred -----------------------CC--cchhHHHHHHHHHHHHHHHHHhhhc----CcEEEEEeCCCccccHHHHh
Confidence 01 3789999999999999999999988 9999999999 689986553
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2e-14 Score=111.24 Aligned_cols=97 Identities=27% Similarity=0.287 Sum_probs=81.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||..+ ..+.|++++++|+.+++.+++.+.|.|.+ .++||++||..+ ...+.
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------- 144 (252)
T PRK07856 80 VNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPG--------------- 144 (252)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCC---------------
Confidence 58888642 23679999999999999999999999964 379999999877 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..+++.++.++.+. |++++|+||+|+|++...
T Consensus 145 ----------------------------~~~Y~~sK~a~~~l~~~la~e~~~~-----i~v~~i~Pg~v~t~~~~~ 187 (252)
T PRK07856 145 ----------------------------TAAYGAAKAGLLNLTRSLAVEWAPK-----VRVNAVVVGLVRTEQSEL 187 (252)
T ss_pred ----------------------------CchhHHHHHHHHHHHHHHHHHhcCC-----eEEEEEEeccccChHHhh
Confidence 3789999999999999999999763 999999999999998653
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.3e-14 Score=110.04 Aligned_cols=98 Identities=24% Similarity=0.162 Sum_probs=82.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..++|++++++|+.+++.+++.++|+|+..+++++++|..+ .+.+.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~------------------ 146 (249)
T PRK06500 85 FINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPN------------------ 146 (249)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCC------------------
Confidence 57887642 22689999999999999999999999987789999988766 33221
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|+++.+++++++.++... ||++++|+||.++|++.+.
T Consensus 147 -------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~i~pg~~~t~~~~~ 190 (249)
T PRK06500 147 -------------------------SSVYAASKAALLSLAKTLSGELLPR----GIRVNAVSPGPVQTPLYGK 190 (249)
T ss_pred -------------------------ccHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcCCCHHHHh
Confidence 3789999999999999999999887 8999999999999997643
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.2e-14 Score=112.03 Aligned_cols=83 Identities=17% Similarity=0.071 Sum_probs=71.3
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhhcC--------CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHH
Q psy16223 12 QAEKTILTNYLGLVRTCVFLFPLLRR--------HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMD 82 (153)
Q Consensus 12 ~~~~~~~vN~~g~~~l~~~~lp~l~~--------~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (153)
+|++++++|+.+++.+++.++|.|+. .++|++++|..+ ...+.
T Consensus 118 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~~~~---------------------------- 169 (267)
T TIGR02685 118 QVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLG---------------------------- 169 (267)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCCCcc----------------------------
Confidence 58899999999999999999999843 257999998776 33221
Q ss_pred HhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 83 ITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
...|++||+++++++++|+.|+.+. ||+|++|+||+++|+
T Consensus 170 ---------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~~~~~ 209 (267)
T TIGR02685 170 ---------------FTMYTMAKHALEGLTRSAALELAPL----QIRVNGVAPGLSLLP 209 (267)
T ss_pred ---------------cchhHHHHHHHHHHHHHHHHHHhhh----CeEEEEEecCCccCc
Confidence 3689999999999999999999988 999999999998765
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-14 Score=115.93 Aligned_cols=113 Identities=25% Similarity=0.211 Sum_probs=81.5
Q ss_pred CCCCCCCcc-----HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccChHHH
Q psy16223 1 MNRASTVPF-----AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73 (153)
Q Consensus 1 innag~~~~-----~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (153)
|||||.... .++++.++++|++|++.+++.++|.|++ +++||++||..+....... .+++.
T Consensus 100 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~--------~~~~~---- 167 (306)
T PRK06197 100 INNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIH--------FDDLQ---- 167 (306)
T ss_pred EECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCC--------ccccC----
Confidence 588986422 2678999999999999999999999975 4799999998753211000 00000
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEE--eeCCcccCCCCCCC
Q psy16223 74 TDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINA--VHPGYVATNMSSFM 146 (153)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~--v~PG~v~T~~~~~~ 146 (153)
..... .+...|+.||++++++++.+++++... |++|++ ++||+|+|+|.+..
T Consensus 168 ---------------~~~~~--~~~~~Y~~SK~a~~~~~~~la~~l~~~----~i~v~~v~~~PG~v~T~~~~~~ 221 (306)
T PRK06197 168 ---------------WERRY--NRVAAYGQSKLANLLFTYELQRRLAAA----GATTIAVAAHPGVSNTELARNL 221 (306)
T ss_pred ---------------cccCC--CcHHHHHHHHHHHHHHHHHHHHHhhcC----CCCeEEEEeCCCcccCcccccC
Confidence 00000 113689999999999999999999876 666654 57999999998754
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-14 Score=115.48 Aligned_cols=99 Identities=18% Similarity=0.244 Sum_probs=82.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+++++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 90 InnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~---------------- 153 (334)
T PRK07109 90 VNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPL---------------- 153 (334)
T ss_pred EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCc----------------
Confidence 58888642 22789999999999999999999999965 489999999887 33222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++..|+++++.|+..+ +. +|+++.|+||+|+|++..
T Consensus 154 ---------------------------~~~Y~asK~a~~~~~~~l~~el~~~-~~-~I~v~~v~Pg~v~T~~~~ 198 (334)
T PRK07109 154 ---------------------------QSAYCAAKHAIRGFTDSLRCELLHD-GS-PVSVTMVQPPAVNTPQFD 198 (334)
T ss_pred ---------------------------chHHHHHHHHHHHHHHHHHHHHhhc-CC-CeEEEEEeCCCccCchhh
Confidence 3689999999999999999999753 11 599999999999999754
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.2e-14 Score=108.85 Aligned_cols=99 Identities=20% Similarity=0.254 Sum_probs=81.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHh-hhhc--CCccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLF-PLLR--RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~l-p~l~--~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||+|... ..++|+.++++|+.|++.+++.++ |.++ +.++||++||..+ .+.+.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--------------- 145 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRG--------------- 145 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCC---------------
Confidence 47787642 237899999999999999999875 5553 3589999999876 43222
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|+++..++++++.++.++ ||++++|+||+++|+|....
T Consensus 146 ----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~~ 190 (239)
T TIGR01831 146 ----------------------------QVNYSAAKAGLIGATKALAVELAKR----KITVNCIAPGLIDTEMLAEV 190 (239)
T ss_pred ----------------------------CcchHHHHHHHHHHHHHHHHHHhHh----CeEEEEEEEccCccccchhh
Confidence 3689999999999999999999988 99999999999999997643
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2e-14 Score=111.30 Aligned_cols=98 Identities=21% Similarity=0.191 Sum_probs=82.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|+.++++|+.+++.+++.+++.|.+ +++||++||..+ .+.+.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------- 149 (257)
T PRK07067 85 FNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEAL--------------- 149 (257)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCC---------------
Confidence 57887642 23789999999999999999999999854 479999999776 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..++++++.++.++ ||++++|+||+|+|++...
T Consensus 150 ----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~i~pg~v~t~~~~~ 193 (257)
T PRK07067 150 ----------------------------VSHYCATKAAVISYTQSAALALIRH----GINVNAIAPGVVDTPMWDQ 193 (257)
T ss_pred ----------------------------CchhhhhHHHHHHHHHHHHHHhccc----CeEEEEEeeCcccchhhhh
Confidence 4789999999999999999999888 9999999999999998543
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.6e-14 Score=109.32 Aligned_cols=96 Identities=25% Similarity=0.297 Sum_probs=80.6
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|+.++++|+.+++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 89 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~--------------- 153 (255)
T PRK05717 89 VCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPD--------------- 153 (255)
T ss_pred EECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCC---------------
Confidence 58888642 23679999999999999999999999954 589999999877 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++..+++.++.++.. +|+|++|+||+++|++..
T Consensus 154 ----------------------------~~~Y~~sKaa~~~~~~~la~~~~~-----~i~v~~i~Pg~i~t~~~~ 195 (255)
T PRK05717 154 ----------------------------TEAYAASKGGLLALTHALAISLGP-----EIRVNAVSPGWIDARDPS 195 (255)
T ss_pred ----------------------------CcchHHHHHHHHHHHHHHHHHhcC-----CCEEEEEecccCcCCccc
Confidence 368999999999999999999864 599999999999998754
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5e-14 Score=107.34 Aligned_cols=98 Identities=18% Similarity=0.150 Sum_probs=82.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||+|... ..+++++++++|+.+++.+++.++|.|++ .++||++||......+.
T Consensus 73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------------- 135 (234)
T PRK07577 73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALD----------------- 135 (234)
T ss_pred EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCC-----------------
Confidence 57888643 23789999999999999999999999964 47999999975332211
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|+++..++++++.++.+. ||++++|+||+++|++...
T Consensus 136 --------------------------~~~Y~~sK~a~~~~~~~~a~e~~~~----gi~v~~i~pg~~~t~~~~~ 179 (234)
T PRK07577 136 --------------------------RTSYSAAKSALVGCTRTWALELAEY----GITVNAVAPGPIETELFRQ 179 (234)
T ss_pred --------------------------chHHHHHHHHHHHHHHHHHHHHHhh----CcEEEEEecCcccCccccc
Confidence 3689999999999999999999887 8999999999999998754
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.2e-14 Score=108.65 Aligned_cols=98 Identities=22% Similarity=0.292 Sum_probs=83.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCC--ccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRH--ARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~--g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.+++.+++.++|.|.+. ++||++||..+ ...+.
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------------- 149 (246)
T PRK12938 86 VNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG---------------- 149 (246)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCC----------------
Confidence 58888743 237899999999999999999999999653 79999999776 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|+++..++++++.++... ||++++|+||+++|++...
T Consensus 150 ---------------------------~~~y~~sK~a~~~~~~~l~~~~~~~----gi~v~~i~pg~~~t~~~~~ 193 (246)
T PRK12938 150 ---------------------------QTNYSTAKAGIHGFTMSLAQEVATK----GVTVNTVSPGYIGTDMVKA 193 (246)
T ss_pred ---------------------------ChhHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEecccCCchhhh
Confidence 3689999999999999999999888 9999999999999998754
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.9e-14 Score=110.52 Aligned_cols=97 Identities=22% Similarity=0.313 Sum_probs=83.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.+++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~---------------- 145 (275)
T PRK08263 82 VNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPM---------------- 145 (275)
T ss_pred EECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCC----------------
Confidence 578887532 3789999999999999999999999965 479999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+.+|+++..+++.++.++... ||++++|+||+++|++.+
T Consensus 146 ---------------------------~~~Y~~sKaa~~~~~~~la~e~~~~----gi~v~~v~Pg~~~t~~~~ 188 (275)
T PRK08263 146 ---------------------------SGIYHASKWALEGMSEALAQEVAEF----GIKVTLVEPGGYSTDWAG 188 (275)
T ss_pred ---------------------------ccHHHHHHHHHHHHHHHHHHHhhhh----CcEEEEEecCCccCCccc
Confidence 3689999999999999999999887 999999999999999985
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.4e-14 Score=109.31 Aligned_cols=98 Identities=19% Similarity=0.166 Sum_probs=83.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.+++.+++.+.+.|.+ .++||++||..+ ...+.
T Consensus 92 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~---------------- 155 (255)
T PRK07523 92 VNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPG---------------- 155 (255)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCC----------------
Confidence 57887642 23789999999999999999999999964 489999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..+++.++.++.++ ||+|++|+||+++|++...
T Consensus 156 ---------------------------~~~y~~sK~a~~~~~~~~a~e~~~~----gi~v~~i~pg~~~t~~~~~ 199 (255)
T PRK07523 156 ---------------------------IAPYTATKGAVGNLTKGMATDWAKH----GLQCNAIAPGYFDTPLNAA 199 (255)
T ss_pred ---------------------------CccHHHHHHHHHHHHHHHHHHhhHh----CeEEEEEEECcccCchhhh
Confidence 3689999999999999999999988 9999999999999998654
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.8e-14 Score=108.11 Aligned_cols=97 Identities=22% Similarity=0.217 Sum_probs=81.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .+++++++++|+.|++.+++.++|.|.+ .++||++||..+ ...+.
T Consensus 100 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---------------- 163 (256)
T PRK12748 100 INNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPD---------------- 163 (256)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCC----------------
Confidence 578876421 2678999999999999999999999864 479999999776 32211
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|++++.++++++.++... ||+|++|+||+++|++..
T Consensus 164 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~i~Pg~~~t~~~~ 206 (256)
T PRK12748 164 ---------------------------ELAYAATKGAIEAFTKSLAPELAEK----GITVNAVNPGPTDTGWIT 206 (256)
T ss_pred ---------------------------chHHHHHHHHHHHHHHHHHHHHHHh----CeEEEEEEeCcccCCCCC
Confidence 3689999999999999999999887 899999999999999754
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.2e-14 Score=108.04 Aligned_cols=98 Identities=21% Similarity=0.289 Sum_probs=83.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||+|... ..++|++.+++|+.+++.+++.+++.|.+ .++||++||..+ ...+.
T Consensus 93 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---------------- 156 (256)
T PRK06124 93 VNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG---------------- 156 (256)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC----------------
Confidence 57787642 12689999999999999999999999954 589999999877 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..+++.++.++... ||++++|+||+++|++...
T Consensus 157 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~i~pg~v~t~~~~~ 200 (256)
T PRK06124 157 ---------------------------DAVYPAAKQGLTGLMRALAAEFGPH----GITSNAIAPGYFATETNAA 200 (256)
T ss_pred ---------------------------ccHhHHHHHHHHHHHHHHHHHHHHh----CcEEEEEEECCccCcchhh
Confidence 3789999999999999999999887 8999999999999998654
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.5e-14 Score=107.35 Aligned_cols=99 Identities=21% Similarity=0.200 Sum_probs=82.4
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .+.+++++++|+.+++.+++++++.|++ .++||++||..+ ...+.
T Consensus 87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------------- 150 (250)
T PRK08063 87 VNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLEN---------------- 150 (250)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC----------------
Confidence 578876421 3678999999999999999999999965 479999999765 32221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|+++..++++++.++... ||++++|+||+++|++...+
T Consensus 151 ---------------------------~~~y~~sK~a~~~~~~~~~~~~~~~----~i~v~~i~pg~v~t~~~~~~ 195 (250)
T PRK08063 151 ---------------------------YTTVGVSKAALEALTRYLAVELAPK----GIAVNAVSGGAVDTDALKHF 195 (250)
T ss_pred ---------------------------ccHHHHHHHHHHHHHHHHHHHHhHh----CeEEEeEecCcccCchhhhc
Confidence 3689999999999999999999887 89999999999999986543
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.2e-14 Score=108.52 Aligned_cols=97 Identities=23% Similarity=0.199 Sum_probs=81.8
Q ss_pred CCCCCCCcc------HHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVPF------AIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~~------~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||.... .++|+..+++|+.+++.+++.++|.|++ .++|+++||..+ ...+.
T Consensus 88 i~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------------------ 149 (258)
T PRK08628 88 VNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGG------------------ 149 (258)
T ss_pred EECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCC------------------
Confidence 578885321 2789999999999999999999999965 589999999877 33211
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.+++.++.|+..+ ||++++|+||.|+|++..
T Consensus 150 -------------------------~~~Y~~sK~a~~~~~~~l~~e~~~~----~i~v~~v~pg~v~t~~~~ 192 (258)
T PRK08628 150 -------------------------TSGYAAAKGAQLALTREWAVALAKD----GVRVNAVIPAEVMTPLYE 192 (258)
T ss_pred -------------------------CchhHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCccCCHHHH
Confidence 3789999999999999999999887 899999999999999854
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-14 Score=110.26 Aligned_cols=98 Identities=23% Similarity=0.268 Sum_probs=85.6
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhh-cCCccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLL-RRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l-~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
+||||..=. -+..++.|+||++|++.++|++...+ ++.|.||++.|..+ ...|.
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf----------------- 148 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPF----------------- 148 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccch-----------------
Confidence 589997411 26799999999999999999999877 45799999999998 55443
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|.+||+|+.++++.|+.|+.+. ||+|..+.||.|.|++...
T Consensus 149 --------------------------~~iYsAsKAAihay~~tLrlEl~PF----gv~Vin~itGGv~T~Ia~k 192 (289)
T KOG1209|consen 149 --------------------------GSIYSASKAAIHAYARTLRLELKPF----GVRVINAITGGVATDIADK 192 (289)
T ss_pred --------------------------hhhhhHHHHHHHHhhhhcEEeeecc----ccEEEEecccceecccccC
Confidence 4789999999999999999999999 9999999999999998765
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.5e-14 Score=107.59 Aligned_cols=98 Identities=26% Similarity=0.271 Sum_probs=82.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.+++.+++.+++.|++ +++||++||..+ .+.+.
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------- 146 (254)
T TIGR02415 82 VNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI--------------- 146 (254)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC---------------
Confidence 57888742 23789999999999999999999999854 379999999876 43322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|+++..+++.++.++.+. ||+|++|+||+++|++...
T Consensus 147 ----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~----~i~v~~v~Pg~i~t~~~~~ 190 (254)
T TIGR02415 147 ----------------------------LSAYSSTKFAVRGLTQTAAQELAPK----GITVNAYCPGIVKTPMWEE 190 (254)
T ss_pred ----------------------------CcchHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCcccChhhhh
Confidence 4789999999999999999999887 8999999999999998654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.6e-14 Score=106.96 Aligned_cols=100 Identities=27% Similarity=0.339 Sum_probs=82.4
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .+++++++++|+.+++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 84 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~---------------- 147 (251)
T PRK07069 84 VNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPD---------------- 147 (251)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCC----------------
Confidence 578886532 2679999999999999999999999975 379999999877 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..++++++.++..+ +. +|++++|+||+++|++...
T Consensus 148 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~-~~-~i~v~~v~pg~v~t~~~~~ 193 (251)
T PRK07069 148 ---------------------------YTAYNASKAAVASLTKSIALDCARR-GL-DVRCNSIHPTFIRTGIVDP 193 (251)
T ss_pred ---------------------------CchhHHHHHHHHHHHHHHHHHhccc-CC-cEEEEEEeecccCCcchhH
Confidence 3689999999999999999999765 11 3999999999999999753
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.1e-14 Score=108.27 Aligned_cols=100 Identities=23% Similarity=0.249 Sum_probs=82.6
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ .+.+.
T Consensus 84 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~-------------- 149 (255)
T PRK06057 84 FNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSAT-------------- 149 (255)
T ss_pred EECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCC--------------
Confidence 47887642 12679999999999999999999999954 589999999776 33210
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
....|+.+|+++..+++.++.++.++ ||+|++|+||+++|++....
T Consensus 150 ----------------------------~~~~Y~~sKaal~~~~~~l~~~~~~~----gi~v~~i~pg~v~t~~~~~~ 195 (255)
T PRK06057 150 ----------------------------SQISYTASKGGVLAMSRELGVQFARQ----GIRVNALCPGPVNTPLLQEL 195 (255)
T ss_pred ----------------------------CCcchHHHHHHHHHHHHHHHHHHHhh----CcEEEEEeeCCcCCchhhhh
Confidence 13679999999999999999999988 89999999999999987643
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.5e-14 Score=106.79 Aligned_cols=98 Identities=30% Similarity=0.223 Sum_probs=80.7
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-----CccEEEecCCcc-cccccccHHHHhhhhcc
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-----HARVVNLSSSAG-HLSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~ 66 (153)
|||||... ..++++.++++|+.+++.+++.+++.|.. +++||++||..+ ...+.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------------ 152 (248)
T PRK06947 85 VNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN------------ 152 (248)
T ss_pred EECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC------------
Confidence 57888642 22678999999999999999999998853 368999999876 33211
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....|++||+++.+++++++.++.+. ||+|+.|+||+++|++..
T Consensus 153 ------------------------------~~~~Y~~sK~~~~~~~~~la~~~~~~----~i~v~~i~Pg~v~t~~~~ 196 (248)
T PRK06947 153 ------------------------------EYVDYAGSKGAVDTLTLGLAKELGPH----GVRVNAVRPGLIETEIHA 196 (248)
T ss_pred ------------------------------CCcccHhhHHHHHHHHHHHHHHhhhh----CcEEEEEeccCccccccc
Confidence 02579999999999999999999887 899999999999999864
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.8e-14 Score=107.34 Aligned_cols=99 Identities=24% Similarity=0.256 Sum_probs=83.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..+.|+.++++|+.|++.+++.+++.|++.+++|++||..+ ...+.
T Consensus 95 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~------------------ 156 (254)
T PRK12746 95 VNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTG------------------ 156 (254)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCC------------------
Confidence 47787642 22678999999999999999999999987789999999776 33221
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|++++.++++++.++... |+++++|+||+++|++....
T Consensus 157 -------------------------~~~Y~~sK~a~~~~~~~~~~~~~~~----~i~v~~v~pg~~~t~~~~~~ 201 (254)
T PRK12746 157 -------------------------SIAYGLSKGALNTMTLPLAKHLGER----GITVNTIMPGYTKTDINAKL 201 (254)
T ss_pred -------------------------CcchHhhHHHHHHHHHHHHHHHhhc----CcEEEEEEECCccCcchhhh
Confidence 3679999999999999999999877 89999999999999987543
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-13 Score=107.43 Aligned_cols=98 Identities=23% Similarity=0.231 Sum_probs=83.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++++.++++|+.+++.+++.+.+.|+. .++||++||..+ .+.+.
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------------- 145 (260)
T PRK08267 82 FNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG---------------- 145 (260)
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC----------------
Confidence 57888752 12679999999999999999999999964 589999999876 43221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.||++++.++++++.++... ||++++|+||+++|++...
T Consensus 146 ---------------------------~~~Y~~sKaa~~~~~~~l~~~~~~~----~i~v~~i~pg~~~t~~~~~ 189 (260)
T PRK08267 146 ---------------------------LAVYSATKFAVRGLTEALDLEWRRH----GIRVADVMPLFVDTAMLDG 189 (260)
T ss_pred ---------------------------chhhHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCCcCCccccc
Confidence 3689999999999999999999887 8999999999999998764
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-13 Score=106.44 Aligned_cols=98 Identities=22% Similarity=0.209 Sum_probs=82.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||+|... ..+++++++++|+.+++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~---------------- 144 (252)
T PRK08220 81 VNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIG---------------- 144 (252)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCC----------------
Confidence 47888642 23689999999999999999999999964 479999999776 32211
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|+++..++++++.++... ||+|++|+||+++|++...
T Consensus 145 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~i~pg~v~t~~~~~ 188 (252)
T PRK08220 145 ---------------------------MAAYGASKAALTSLAKCVGLELAPY----GVRCNVVSPGSTDTDMQRT 188 (252)
T ss_pred ---------------------------CchhHHHHHHHHHHHHHHHHHhhHh----CeEEEEEecCcCcchhhhh
Confidence 3789999999999999999999888 9999999999999998653
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-13 Score=105.79 Aligned_cols=99 Identities=24% Similarity=0.275 Sum_probs=83.3
Q ss_pred CCCCCCC-------ccHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTV-------PFAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~-------~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||+|.. ...++|++++++|+.+++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~---------------- 148 (245)
T PRK12824 85 VNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFG---------------- 148 (245)
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCC----------------
Confidence 4777754 223789999999999999999999999964 579999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|+++.++++.++.++.+. ||++++|+||+++|++.+..
T Consensus 149 ---------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~~~ 193 (245)
T PRK12824 149 ---------------------------QTNYSAAKAGMIGFTKALASEGARY----GITVNCIAPGYIATPMVEQM 193 (245)
T ss_pred ---------------------------ChHHHHHHHHHHHHHHHHHHHHHHh----CeEEEEEEEcccCCcchhhc
Confidence 3689999999999999999999887 89999999999999987643
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.7e-14 Score=108.64 Aligned_cols=100 Identities=26% Similarity=0.349 Sum_probs=81.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..+++++++++|+.+++.+++.++|.|.. .++||++||..+...+.
T Consensus 87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------------- 149 (263)
T PRK08226 87 VNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVAD----------------- 149 (263)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCC-----------------
Confidence 57888632 23679999999999999999999999854 47999999976532110
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
++ ...|+.+|+++++++++++.++.++ ||+|++|+||+++|+|.+.
T Consensus 150 ----------------------~~--~~~Y~~sK~a~~~~~~~la~~~~~~----~i~v~~i~pg~v~t~~~~~ 195 (263)
T PRK08226 150 ----------------------PG--ETAYALTKAAIVGLTKSLAVEYAQS----GIRVNAICPGYVRTPMAES 195 (263)
T ss_pred ----------------------CC--cchHHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCcccCHHHHh
Confidence 01 3689999999999999999999887 8999999999999998754
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-13 Score=108.51 Aligned_cols=101 Identities=22% Similarity=0.193 Sum_probs=82.2
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCC--------ccEEEecCCcc-cccccccHHHHhhhh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRH--------ARVVNLSSSAG-HLSQITNLELKKRLM 64 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~--------g~iv~~sS~~~-~~~~~~~~~~~~~~~ 64 (153)
|||||... ..++|+.++++|+.|++.+++.++|.|.+. ++||++||..+ ...+.
T Consensus 88 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------- 157 (287)
T PRK06194 88 FNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPA---------- 157 (287)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC----------
Confidence 58888753 237899999999999999999999998531 68999999877 33221
Q ss_pred ccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 65 EDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++..++++++.++... +. +|++++|+||+|+|++..
T Consensus 158 ---------------------------------~~~Y~~sK~a~~~~~~~l~~e~~~~-~~-~irv~~v~pg~i~t~~~~ 202 (287)
T PRK06194 158 ---------------------------------MGIYNVSKHAVVSLTETLYQDLSLV-TD-QVGASVLCPYFVPTGIWQ 202 (287)
T ss_pred ---------------------------------CcchHHHHHHHHHHHHHHHHHHhhc-CC-CeEEEEEEeCcccCcccc
Confidence 3679999999999999999998743 11 599999999999999876
Q ss_pred CC
Q psy16223 145 FM 146 (153)
Q Consensus 145 ~~ 146 (153)
..
T Consensus 203 ~~ 204 (287)
T PRK06194 203 SE 204 (287)
T ss_pred cc
Confidence 54
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.1e-13 Score=120.21 Aligned_cols=98 Identities=27% Similarity=0.281 Sum_probs=83.6
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..+++++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 453 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 518 (657)
T PRK07201 453 VNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPR-------------- 518 (657)
T ss_pred EECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC--------------
Confidence 58898641 12678999999999999999999999965 479999999877 33221
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..++++++.|+.+. ||+|++|+||+|+|+|...
T Consensus 519 -----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~v~pg~v~T~~~~~ 562 (657)
T PRK07201 519 -----------------------------FSAYVASKAALDAFSDVAASETLSD----GITFTTIHMPLVRTPMIAP 562 (657)
T ss_pred -----------------------------cchHHHHHHHHHHHHHHHHHHHHhh----CCcEEEEECCcCcccccCc
Confidence 3689999999999999999999988 9999999999999999764
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-13 Score=105.77 Aligned_cols=99 Identities=19% Similarity=0.225 Sum_probs=82.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||+|... ..+++++++++|+.|++.+++.+.|.|.+ .+++|++||..+ ...+.
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------- 144 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRAS---------------- 144 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCC----------------
Confidence 46777642 22678899999999999999999999964 589999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|+++.+++++++.++.+. ||++++|+||+++|++....
T Consensus 145 ---------------------------~~~Y~~sK~a~~~~~~~l~~el~~~----gi~v~~v~pg~v~t~~~~~~ 189 (243)
T PRK07102 145 ---------------------------NYVYGSAKAALTAFLSGLRNRLFKS----GVHVLTVKPGFVRTPMTAGL 189 (243)
T ss_pred ---------------------------CcccHHHHHHHHHHHHHHHHHhhcc----CcEEEEEecCcccChhhhcc
Confidence 3679999999999999999999888 99999999999999987654
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.6e-13 Score=110.06 Aligned_cols=134 Identities=20% Similarity=0.224 Sum_probs=83.6
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCC----ccEEEecCCcccccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRRH----ARVVNLSSSAGHLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~----g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||+.. ..++|+.++++|++|++.+++.++|.|++. +|||++||..+....... .. . + ....
T Consensus 88 i~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~-~~-~-~-~~~~ 163 (322)
T PRK07453 88 VCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGG-KI-P-I-PAPA 163 (322)
T ss_pred EECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCC-cc-C-C-CCcc
Confidence 68998642 237899999999999999999999999652 599999998762110000 00 0 0 0000
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc-cccCCCCeEEEEeeCCcc-cCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD-CELGNQDKVINAVHPGYV-ATNMSSF 145 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~~~~~gi~v~~v~PG~v-~T~~~~~ 145 (153)
....+......+.... . -.......+...|+.||.+++.+++.+++++. .. ||++++|+||+| .|++.+.
T Consensus 164 ~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~----gi~v~~v~PG~v~~t~~~~~ 235 (322)
T PRK07453 164 DLGDLSGFEAGFKAPI-S--MADGKKFKPGKAYKDSKLCNMLTMRELHRRYHEST----GITFSSLYPGCVADTPLFRN 235 (322)
T ss_pred chhhhhcchhcccccc-c--ccCccCCCccchhhHhHHHHHHHHHHHHHhhcccC----CeEEEEecCCcccCCccccc
Confidence 0000000000000000 0 00001122347899999999999999999985 34 799999999999 5988765
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-13 Score=107.14 Aligned_cols=98 Identities=23% Similarity=0.247 Sum_probs=82.6
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCC--ccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRH--ARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~--g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .+++++++++|+.|++.+++.++|+|.+. ++||++||..+ .+.+.
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------------- 148 (263)
T PRK09072 85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPG---------------- 148 (263)
T ss_pred EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCC----------------
Confidence 477876432 36789999999999999999999999654 89999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|+++.+++++++.++.+. ||+|++|+||+++|++...
T Consensus 149 ---------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~----~i~v~~v~Pg~~~t~~~~~ 192 (263)
T PRK09072 149 ---------------------------YASYCASKFALRGFSEALRRELADT----GVRVLYLAPRATRTAMNSE 192 (263)
T ss_pred ---------------------------ccHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCcccccchhh
Confidence 3789999999999999999999888 8999999999999998643
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-13 Score=107.50 Aligned_cols=95 Identities=23% Similarity=0.310 Sum_probs=79.5
Q ss_pred CCCCCCC-------ccHHHHHHHHhhhhhHHHHHHHHHhhhhc-CCccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTV-------PFAIQAEKTILTNYLGLVRTCVFLFPLLR-RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~-------~~~~~~~~~~~vN~~g~~~l~~~~lp~l~-~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||.. ...++|++++++|+.|++.++++++|.|+ ++++||++||..+ ...+.
T Consensus 91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~----------------- 153 (264)
T PRK07576 91 VSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPM----------------- 153 (264)
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCC-----------------
Confidence 5778753 12377999999999999999999999996 4689999999876 33221
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCccc-CCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVA-TNM 142 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~-T~~ 142 (153)
...|+++|+++..|+++++.++..+ ||+|++|+||+++ |+.
T Consensus 154 --------------------------~~~Y~asK~a~~~l~~~la~e~~~~----gi~v~~v~pg~~~~t~~ 195 (264)
T PRK07576 154 --------------------------QAHVCAAKAGVDMLTRTLALEWGPE----GIRVNSIVPGPIAGTEG 195 (264)
T ss_pred --------------------------ccHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecccccCcHH
Confidence 4789999999999999999999887 9999999999997 553
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.8e-14 Score=107.22 Aligned_cols=96 Identities=22% Similarity=0.194 Sum_probs=80.3
Q ss_pred CCCCCCCcc--------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF--------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~--------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.|++.+++.+++.|.+ .++||++||..+ ...+.
T Consensus 82 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------- 146 (243)
T PRK07023 82 INNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAG--------------- 146 (243)
T ss_pred EEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCC---------------
Confidence 578876432 3789999999999999999999999964 479999999876 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++..+++.++.+ ... ||++++|+||+++|++..
T Consensus 147 ----------------------------~~~Y~~sK~a~~~~~~~~~~~-~~~----~i~v~~v~pg~~~t~~~~ 188 (243)
T PRK07023 147 ----------------------------WSVYCATKAALDHHARAVALD-ANR----ALRIVSLAPGVVDTGMQA 188 (243)
T ss_pred ----------------------------chHHHHHHHHHHHHHHHHHhc-CCC----CcEEEEecCCccccHHHH
Confidence 368999999999999999999 666 899999999999999753
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-13 Score=115.25 Aligned_cols=99 Identities=26% Similarity=0.325 Sum_probs=84.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhh--hhcCCccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFP--LLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp--~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+.|+.++++|+.|++.+++.+++ .++++++||++||..+ .+.+.
T Consensus 289 i~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~---------------- 352 (450)
T PRK08261 289 VHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRG---------------- 352 (450)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC----------------
Confidence 58888753 3378999999999999999999999 4556799999999877 33222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|++++.++++++.++.+. ||++++|+||+++|+|....
T Consensus 353 ---------------------------~~~Y~asKaal~~~~~~la~el~~~----gi~v~~v~PG~i~t~~~~~~ 397 (450)
T PRK08261 353 ---------------------------QTNYAASKAGVIGLVQALAPLLAER----GITINAVAPGFIETQMTAAI 397 (450)
T ss_pred ---------------------------ChHHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEEeCcCcchhhhcc
Confidence 4789999999999999999999988 99999999999999987654
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.8e-14 Score=107.47 Aligned_cols=99 Identities=26% Similarity=0.263 Sum_probs=79.7
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.+++.+++.++|+|++ +++||++||..+ ...+.
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------- 150 (251)
T PRK06924 85 INNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFG-------------- 150 (251)
T ss_pred EEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCC--------------
Confidence 46777532 23789999999999999999999999965 368999999776 33221
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++..+++.++.++... . .||+|++|+||+++|++..
T Consensus 151 -----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~-~-~~i~v~~v~Pg~v~t~~~~ 195 (251)
T PRK06924 151 -----------------------------WSAYCSSKAGLDMFTQTVATEQEEE-E-YPVKIVAFSPGVMDTNMQA 195 (251)
T ss_pred -----------------------------cHHHhHHHHHHHHHHHHHHHHhhhc-C-CCeEEEEecCCccccHhHH
Confidence 3689999999999999999998531 1 1799999999999999854
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.7e-13 Score=104.77 Aligned_cols=98 Identities=19% Similarity=0.279 Sum_probs=82.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhc--CCccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLR--RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~--~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.+++.+++.+.+.|. ..++||++||..+ .+.+.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------- 148 (245)
T PRK12936 85 VNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG---------------- 148 (245)
T ss_pred EECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC----------------
Confidence 57888642 2367999999999999999999998874 3579999999776 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|+++..+++.++.++... |+++++|+||+++|++...
T Consensus 149 ---------------------------~~~Y~~sk~a~~~~~~~la~~~~~~----~i~v~~i~pg~~~t~~~~~ 192 (245)
T PRK12936 149 ---------------------------QANYCASKAGMIGFSKSLAQEIATR----NVTVNCVAPGFIESAMTGK 192 (245)
T ss_pred ---------------------------CcchHHHHHHHHHHHHHHHHHhhHh----CeEEEEEEECcCcCchhcc
Confidence 3689999999999999999999887 8999999999999998754
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.4e-13 Score=104.57 Aligned_cols=101 Identities=21% Similarity=0.253 Sum_probs=83.7
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .+.+++++++|+.+++.+++.++|.|++ .++||++||..+ .+.+.
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------- 149 (248)
T PRK08251 86 IVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPG---------------- 149 (248)
T ss_pred EECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCC----------------
Confidence 578886422 3678899999999999999999999864 479999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
....|+.||+++..+++.++.++... ||++++|+||+++|++.+...
T Consensus 150 --------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~----~i~v~~v~pg~v~t~~~~~~~ 196 (248)
T PRK08251 150 --------------------------VKAAYAASKAGVASLGEGLRAELAKT----PIKVSTIEPGYIRSEMNAKAK 196 (248)
T ss_pred --------------------------CcccHHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCcCcchhhhccc
Confidence 13689999999999999999999877 899999999999999987543
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.3e-13 Score=104.43 Aligned_cols=99 Identities=25% Similarity=0.277 Sum_probs=83.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||+|... ..+++++++++|+.+++.+++.+.|.|.+ .+++|++||..+ .+.+.
T Consensus 89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 152 (250)
T PRK12939 89 VNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK---------------- 152 (250)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC----------------
Confidence 47787642 23679999999999999999999999965 689999999776 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|+++..+++.++.++... +|++++|+||+++|++.+..
T Consensus 153 ---------------------------~~~y~~sK~~~~~~~~~l~~~~~~~----~i~v~~v~pg~v~t~~~~~~ 197 (250)
T PRK12939 153 ---------------------------LGAYVASKGAVIGMTRSLARELGGR----GITVNAIAPGLTATEATAYV 197 (250)
T ss_pred ---------------------------cchHHHHHHHHHHHHHHHHHHHhhh----CEEEEEEEECCCCCcccccc
Confidence 3679999999999999999999887 89999999999999997654
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.2e-13 Score=104.68 Aligned_cols=98 Identities=21% Similarity=0.307 Sum_probs=82.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+++++++++|+.+++.+++.++|.|.+ .++||++||..+ ...+.
T Consensus 89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------- 152 (247)
T PRK12935 89 VNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFG---------------- 152 (247)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCC----------------
Confidence 47787642 22789999999999999999999999954 579999999876 33211
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++.+++++++.++.+. ||+++.|+||+++|++...
T Consensus 153 ---------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~----~i~v~~v~pg~v~t~~~~~ 196 (247)
T PRK12935 153 ---------------------------QTNYSAAKAGMLGFTKSLALELAKT----NVTVNAICPGFIDTEMVAE 196 (247)
T ss_pred ---------------------------CcchHHHHHHHHHHHHHHHHHHHHc----CcEEEEEEeCCCcChhhhh
Confidence 3789999999999999999999877 8999999999999998654
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.1e-13 Score=103.93 Aligned_cols=97 Identities=23% Similarity=0.273 Sum_probs=82.4
Q ss_pred CCCCCCCc----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP----------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..+.+++++++|+.+++.+++.++|.|.+ .++||++||..+...
T Consensus 88 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------- 151 (250)
T PRK07774 88 VNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY---------------- 151 (250)
T ss_pred EECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC----------------
Confidence 57888642 22679999999999999999999999954 589999999765321
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.+++++++++... ||++++|+||.++|++....
T Consensus 152 -----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~~~ 196 (250)
T PRK07774 152 -----------------------------SNFYGLAKVGLNGLTQQLARELGGM----NIRVNAIAPGPIDTEATRTV 196 (250)
T ss_pred -----------------------------ccccHHHHHHHHHHHHHHHHHhCcc----CeEEEEEecCcccCcccccc
Confidence 2679999999999999999999877 89999999999999997653
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.2e-13 Score=105.20 Aligned_cols=98 Identities=21% Similarity=0.269 Sum_probs=81.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC----------CccEEEecCCcc-cccccccHHHHhh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR----------HARVVNLSSSAG-HLSQITNLELKKR 62 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~----------~g~iv~~sS~~~-~~~~~~~~~~~~~ 62 (153)
|||||... ..++|+.++++|+.+++.++++++|.|.. .++||++||..+ ...+.
T Consensus 91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------- 162 (258)
T PRK06949 91 VNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQ-------- 162 (258)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCC--------
Confidence 47787532 23679999999999999999999998842 368999999876 33211
Q ss_pred hhccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 63 LMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|+++|+++..+++.++.++.+. ||+|++|+||+|+|++
T Consensus 163 -----------------------------------~~~Y~~sK~a~~~~~~~la~~~~~~----~i~v~~v~pG~v~t~~ 203 (258)
T PRK06949 163 -----------------------------------IGLYCMSKAAVVHMTRAMALEWGRH----GINVNAICPGYIDTEI 203 (258)
T ss_pred -----------------------------------ccHHHHHHHHHHHHHHHHHHHHHhc----CeEEEEEeeCCCcCCc
Confidence 3689999999999999999999887 8999999999999998
Q ss_pred CCC
Q psy16223 143 SSF 145 (153)
Q Consensus 143 ~~~ 145 (153)
...
T Consensus 204 ~~~ 206 (258)
T PRK06949 204 NHH 206 (258)
T ss_pred chh
Confidence 754
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.6e-13 Score=100.86 Aligned_cols=94 Identities=24% Similarity=0.310 Sum_probs=81.2
Q ss_pred CCCCCCCccH---------HHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVPFA---------IQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~~~---------~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||++... +..+..+.+|+++++.++..++|+|.+ .+.||++||..+ .+-.
T Consensus 83 iNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~--------------- 147 (245)
T COG3967 83 INNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMA--------------- 147 (245)
T ss_pred eecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccc---------------
Confidence 6999997332 567889999999999999999999954 599999999887 4321
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
....|+++|+|+..|+.+|+.+++.. +|.|.-+.|..|+|+
T Consensus 148 ----------------------------~~PvYcaTKAaiHsyt~aLR~Qlk~t----~veVIE~~PP~V~t~ 188 (245)
T COG3967 148 ----------------------------STPVYCATKAAIHSYTLALREQLKDT----SVEVIELAPPLVDTT 188 (245)
T ss_pred ----------------------------ccccchhhHHHHHHHHHHHHHHhhhc----ceEEEEecCCceecC
Confidence 13679999999999999999999987 899999999999997
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.9e-13 Score=103.80 Aligned_cols=97 Identities=21% Similarity=0.207 Sum_probs=82.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+++++++++|+.+++.+++.++|.|.+ .++||++||..+ ...+.
T Consensus 88 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------------- 151 (241)
T PRK07454 88 INNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ---------------- 151 (241)
T ss_pred EECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC----------------
Confidence 47887642 23679999999999999999999999965 489999999876 32211
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+.+|++++.++++++.++... ||++++|+||+++|++..
T Consensus 152 ---------------------------~~~Y~~sK~~~~~~~~~~a~e~~~~----gi~v~~i~pg~i~t~~~~ 194 (241)
T PRK07454 152 ---------------------------WGAYCVSKAALAAFTKCLAEEERSH----GIRVCTITLGAVNTPLWD 194 (241)
T ss_pred ---------------------------ccHHHHHHHHHHHHHHHHHHHhhhh----CCEEEEEecCcccCCccc
Confidence 3689999999999999999999888 899999999999999865
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.5e-13 Score=103.55 Aligned_cols=98 Identities=26% Similarity=0.222 Sum_probs=81.0
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-----CccEEEecCCcc-cccccccHHHHhhhhcc
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-----HARVVNLSSSAG-HLSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~ 66 (153)
|||||... ..++|+.++++|+.+++.+++.+++.|++ +++||++||..+ ...+.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------------ 152 (248)
T PRK06123 85 VNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG------------ 152 (248)
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC------------
Confidence 57888642 23679999999999999999999999853 368999999876 33221
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
. ...|+++|+++..++++++.++.+. ||++++|+||++.|++..
T Consensus 153 ----------------------------~--~~~Y~~sKaa~~~~~~~la~~~~~~----~i~v~~i~pg~v~~~~~~ 196 (248)
T PRK06123 153 ----------------------------E--YIDYAASKGAIDTMTIGLAKEVAAE----GIRVNAVRPGVIYTEIHA 196 (248)
T ss_pred ----------------------------C--ccchHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCcccCchhh
Confidence 0 1469999999999999999999887 899999999999999754
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-13 Score=104.66 Aligned_cols=97 Identities=23% Similarity=0.234 Sum_probs=82.3
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.+.+.|++ +++||++||..+ ...+.
T Consensus 87 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---------------- 150 (258)
T PRK07890 87 VNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPK---------------- 150 (258)
T ss_pred EECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCC----------------
Confidence 57887632 23789999999999999999999999965 579999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++..+++.++.++.+. ||++++|+||++.|++..
T Consensus 151 ---------------------------~~~Y~~sK~a~~~l~~~~a~~~~~~----~i~v~~v~pg~v~~~~~~ 193 (258)
T PRK07890 151 ---------------------------YGAYKMAKGALLAASQSLATELGPQ----GIRVNSVAPGYIWGDPLK 193 (258)
T ss_pred ---------------------------cchhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEeCCccCcHHHH
Confidence 3689999999999999999999988 899999999999999754
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.1e-13 Score=104.13 Aligned_cols=99 Identities=24% Similarity=0.248 Sum_probs=82.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+++++.+++|+.|++.+++.++|+|++ .++||++||..+ ...+.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------- 144 (276)
T PRK06482 81 VSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPG---------------- 144 (276)
T ss_pred EECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCC----------------
Confidence 57887642 23678999999999999999999999965 479999999776 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.||+++..++++++.++... ||+++.|+||.+.|++....
T Consensus 145 ---------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~----gi~v~~v~pg~~~t~~~~~~ 189 (276)
T PRK06482 145 ---------------------------FSLYHATKWGIEGFVEAVAQEVAPF----GIEFTIVEPGPARTNFGAGL 189 (276)
T ss_pred ---------------------------CchhHHHHHHHHHHHHHHHHHhhcc----CcEEEEEeCCccccCCcccc
Confidence 4789999999999999999999877 89999999999999987543
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.1e-13 Score=103.99 Aligned_cols=97 Identities=18% Similarity=0.212 Sum_probs=79.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.+++.|.+ .++||++||..+ ...+.
T Consensus 86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~--------------- 150 (259)
T PRK12384 86 VYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKH--------------- 150 (259)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCC---------------
Confidence 57787542 23789999999999999999999999954 369999999776 33211
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCc-ccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGY-VATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~-v~T~~~~ 144 (153)
...|++||+++..++++++.++... ||+|++|+||. +.|++..
T Consensus 151 ----------------------------~~~Y~~sKaa~~~l~~~la~e~~~~----gi~v~~v~pg~~~~~~~~~ 194 (259)
T PRK12384 151 ----------------------------NSGYSAAKFGGVGLTQSLALDLAEY----GITVHSLMLGNLLKSPMFQ 194 (259)
T ss_pred ----------------------------CchhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEecCCcccchhhh
Confidence 3689999999999999999999888 99999999996 4777654
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.9e-13 Score=102.82 Aligned_cols=95 Identities=22% Similarity=0.249 Sum_probs=79.2
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------- 143 (248)
T PRK10538 79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG--------------- 143 (248)
T ss_pred EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCC---------------
Confidence 47887631 23789999999999999999999999964 379999999876 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|+.+|+++..+++.++.++... ||++++|+||++.|++
T Consensus 144 ----------------------------~~~Y~~sK~~~~~~~~~l~~~~~~~----~i~v~~v~pg~i~~~~ 184 (248)
T PRK10538 144 ----------------------------GNVYGATKAFVRQFSLNLRTDLHGT----AVRVTDIEPGLVGGTE 184 (248)
T ss_pred ----------------------------CchhHHHHHHHHHHHHHHHHHhcCC----CcEEEEEeCCeecccc
Confidence 3689999999999999999999887 8999999999998544
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.5e-13 Score=102.79 Aligned_cols=96 Identities=22% Similarity=0.182 Sum_probs=81.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCccc-ccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAGH-LSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~ 69 (153)
|||+|... ..+.|++++++|+.+++.+++.+++.|.+ .+++|++||..+. ..+.
T Consensus 89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~--------------- 153 (260)
T PRK06198 89 VNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF--------------- 153 (260)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC---------------
Confidence 47777642 23778999999999999999999999954 3789999998763 2221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|+.+|+++..++++++.++... ||++++|+||+++|++.
T Consensus 154 ----------------------------~~~Y~~sK~a~~~~~~~~a~e~~~~----~i~v~~i~pg~~~t~~~ 195 (260)
T PRK06198 154 ----------------------------LAAYCASKGALATLTRNAAYALLRN----RIRVNGLNIGWMATEGE 195 (260)
T ss_pred ----------------------------cchhHHHHHHHHHHHHHHHHHhccc----CeEEEEEeeccccCcch
Confidence 3689999999999999999999887 89999999999999974
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.8e-13 Score=103.78 Aligned_cols=96 Identities=21% Similarity=0.200 Sum_probs=80.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..+++++++++|+.+++.+++.+.|.|.+ .++||++||..+ ...+.
T Consensus 92 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------- 156 (263)
T PRK07814 92 VNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRG--------------- 156 (263)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCC---------------
Confidence 57887532 22779999999999999999999999954 489999999877 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++..++++++.++.. +|++++|+||+++|++..
T Consensus 157 ----------------------------~~~Y~~sK~a~~~~~~~~~~e~~~-----~i~v~~i~Pg~v~t~~~~ 198 (263)
T PRK07814 157 ----------------------------FAAYGTAKAALAHYTRLAALDLCP-----RIRVNAIAPGSILTSALE 198 (263)
T ss_pred ----------------------------CchhHHHHHHHHHHHHHHHHHHCC-----CceEEEEEeCCCcCchhh
Confidence 478999999999999999999864 599999999999999765
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.3e-13 Score=103.02 Aligned_cols=97 Identities=20% Similarity=0.181 Sum_probs=81.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+.++..+++|+.+++.+++.+++.|++ .++||++||..+ ...+.
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~---------------- 141 (257)
T PRK09291 78 LNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPF---------------- 141 (257)
T ss_pred EECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCC----------------
Confidence 57888642 23779999999999999999999999864 379999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+.||++++.+++.++.++... ||++++|+||++.|++..
T Consensus 142 ---------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~----gi~~~~v~pg~~~t~~~~ 184 (257)
T PRK09291 142 ---------------------------TGAYCASKHALEAIAEAMHAELKPF----GIQVATVNPGPYLTGFND 184 (257)
T ss_pred ---------------------------cchhHHHHHHHHHHHHHHHHHHHhc----CcEEEEEecCcccccchh
Confidence 3689999999999999999999887 899999999999998754
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.5e-13 Score=101.57 Aligned_cols=89 Identities=24% Similarity=0.247 Sum_probs=75.6
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEH 87 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (153)
+.++.++++|+.|++.+++.++|.|.. +++|+++||....+.+.
T Consensus 113 ~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~--------------------------------- 159 (253)
T PRK08217 113 EQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMG--------------------------------- 159 (253)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCC---------------------------------
Confidence 678999999999999999999999843 46899998864332211
Q ss_pred CCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 88 PRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 88 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|+++..++++++.++.+. ||++++|+||+++|++....
T Consensus 160 ----------~~~Y~~sK~a~~~l~~~la~~~~~~----~i~v~~v~pg~v~t~~~~~~ 204 (253)
T PRK08217 160 ----------QTNYSASKAGVAAMTVTWAKELARY----GIRVAAIAPGVIETEMTAAM 204 (253)
T ss_pred ----------CchhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEeeCCCcCcccccc
Confidence 3789999999999999999999877 89999999999999987643
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.3e-13 Score=102.06 Aligned_cols=94 Identities=18% Similarity=0.159 Sum_probs=78.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||+|... ..+++++++++|+.+++.+++ .+.+++.++||++||..+ ...+.
T Consensus 74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~~g~iv~~ss~~~~~~~~~------------------ 133 (230)
T PRK07041 74 VITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAPGGSLTFVSGFAAVRPSAS------------------ 133 (230)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcCCeEEEEECchhhcCCCCc------------------
Confidence 57887642 237899999999999999999 567777799999999887 33221
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|+++.+++|+++.|+. +|++++++||+++|++...
T Consensus 134 -------------------------~~~Y~~sK~a~~~~~~~la~e~~------~irv~~i~pg~~~t~~~~~ 175 (230)
T PRK07041 134 -------------------------GVLQGAINAALEALARGLALELA------PVRVNTVSPGLVDTPLWSK 175 (230)
T ss_pred -------------------------chHHHHHHHHHHHHHHHHHHHhh------CceEEEEeecccccHHHHh
Confidence 36899999999999999999985 5999999999999998653
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=8.5e-13 Score=101.66 Aligned_cols=98 Identities=23% Similarity=0.243 Sum_probs=81.9
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++.+++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 97 i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~--------------- 161 (247)
T PRK08945 97 LHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRAN--------------- 161 (247)
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCC---------------
Confidence 47787631 23789999999999999999999999954 579999999876 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..+++.++.++... ||++++|+||+++|++...
T Consensus 162 ----------------------------~~~Y~~sK~a~~~~~~~~~~~~~~~----~i~~~~v~pg~v~t~~~~~ 205 (247)
T PRK08945 162 ----------------------------WGAYAVSKFATEGMMQVLADEYQGT----NLRVNCINPGGTRTAMRAS 205 (247)
T ss_pred ----------------------------CcccHHHHHHHHHHHHHHHHHhccc----CEEEEEEecCCccCcchhh
Confidence 3689999999999999999999887 8999999999999997643
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=8.2e-13 Score=101.38 Aligned_cols=99 Identities=23% Similarity=0.189 Sum_probs=82.9
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.+++.|.+ .++||++||..+ ...+.
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------- 150 (251)
T PRK07231 86 VNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG--------------- 150 (251)
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCC---------------
Confidence 47777631 23779999999999999999999999954 478999999876 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|.++..+++.++.++.+. ||++++|+||+++|++....
T Consensus 151 ----------------------------~~~y~~sk~~~~~~~~~~a~~~~~~----~i~v~~i~pg~~~t~~~~~~ 195 (251)
T PRK07231 151 ----------------------------LGWYNASKGAVITLTKALAAELGPD----KIRVNAVAPVVVETGLLEAF 195 (251)
T ss_pred ----------------------------chHHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEECccCCCcchhh
Confidence 3689999999999999999999887 89999999999999987654
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.6e-13 Score=100.76 Aligned_cols=99 Identities=24% Similarity=0.289 Sum_probs=82.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+++++++++|+.+++.+++.++|.|++ .++||++||..+ .+.+.
T Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~---------------- 146 (242)
T TIGR01829 83 VNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFG---------------- 146 (242)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC----------------
Confidence 47787542 23679999999999999999999999965 379999999776 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|+++..+++.++.++... ||++++++||+++|++....
T Consensus 147 ---------------------------~~~y~~sk~a~~~~~~~la~~~~~~----~i~v~~i~pg~~~t~~~~~~ 191 (242)
T TIGR01829 147 ---------------------------QTNYSAAKAGMIGFTKALAQEGATK----GVTVNTISPGYIATDMVMAM 191 (242)
T ss_pred ---------------------------cchhHHHHHHHHHHHHHHHHHhhhh----CeEEEEEeeCCCcCcccccc
Confidence 3689999999999999999999887 89999999999999987643
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.7e-13 Score=101.72 Aligned_cols=97 Identities=25% Similarity=0.251 Sum_probs=81.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..+.+++.+++|+.+++.+++.+.|.|++.+++|++||..+ ...+.
T Consensus 89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------------ 150 (252)
T PRK06077 89 VNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYG------------------ 150 (252)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCC------------------
Confidence 57888632 23568899999999999999999999988899999999877 33221
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..+++.++.++.. +|+++.|.||+++|++...
T Consensus 151 -------------------------~~~Y~~sK~~~~~~~~~l~~~~~~-----~i~v~~v~Pg~i~t~~~~~ 193 (252)
T PRK06077 151 -------------------------LSIYGAMKAAVINLTKYLALELAP-----KIRVNAIAPGFVKTKLGES 193 (252)
T ss_pred -------------------------chHHHHHHHHHHHHHHHHHHHHhc-----CCEEEEEeeCCccChHHHh
Confidence 368999999999999999999864 6999999999999998643
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.2e-13 Score=102.22 Aligned_cols=99 Identities=22% Similarity=0.223 Sum_probs=83.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||+|... ..+++++++++|+.+++.+++.+++.|++ .++|+++||..+ ...+.
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---------------- 149 (252)
T PRK06138 86 VNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRG---------------- 149 (252)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCC----------------
Confidence 47787642 34789999999999999999999999965 479999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|+++..++++++.++... |+++++|+||++.|++..+.
T Consensus 150 ---------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~~~ 194 (252)
T PRK06138 150 ---------------------------RAAYVASKGAIASLTRAMALDHATD----GIRVNAVAPGTIDTPYFRRI 194 (252)
T ss_pred ---------------------------ccHHHHHHHHHHHHHHHHHHHHHhc----CeEEEEEEECCccCcchhhh
Confidence 3789999999999999999999887 89999999999999987643
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-12 Score=102.62 Aligned_cols=98 Identities=20% Similarity=0.180 Sum_probs=81.8
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|+.++++|+.+++.+++.+++.|.+ .++|+++||..+ ...+.
T Consensus 91 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------- 155 (276)
T PRK05875 91 VHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRW--------------- 155 (276)
T ss_pred EECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCC---------------
Confidence 57887531 23679999999999999999999999954 479999999776 32221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|+++..+++.++.++... ||++++|+||+++|++...
T Consensus 156 ----------------------------~~~Y~~sK~a~~~~~~~~~~~~~~~----~i~v~~i~Pg~v~t~~~~~ 199 (276)
T PRK05875 156 ----------------------------FGAYGVTKSAVDHLMKLAADELGPS----WVRVNSIRPGLIRTDLVAP 199 (276)
T ss_pred ----------------------------CcchHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCccCCccccc
Confidence 3689999999999999999999887 8999999999999998754
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=9e-13 Score=100.21 Aligned_cols=101 Identities=25% Similarity=0.246 Sum_probs=79.9
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||+|... ..++|+.++++|+.+++.+++.++|+|.+ ++++++++|..+ .....
T Consensus 75 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 139 (222)
T PRK06953 75 VYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT--------------- 139 (222)
T ss_pred EECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc---------------
Confidence 46777641 34789999999999999999999999965 579999999776 32110
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
......|+.+|+++..+++.++.++. ++++++|+||+++|+|.+...
T Consensus 140 -------------------------~~~~~~Y~~sK~a~~~~~~~~~~~~~------~i~v~~v~Pg~i~t~~~~~~~ 186 (222)
T PRK06953 140 -------------------------GTTGWLYRASKAALNDALRAASLQAR------HATCIALHPGWVRTDMGGAQA 186 (222)
T ss_pred -------------------------CCCccccHHhHHHHHHHHHHHhhhcc------CcEEEEECCCeeecCCCCCCC
Confidence 00113699999999999999998863 699999999999999977543
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.5e-13 Score=101.81 Aligned_cols=99 Identities=19% Similarity=0.267 Sum_probs=82.0
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--------CccEEEecCCcc-cccccccHHHHhh
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--------HARVVNLSSSAG-HLSQITNLELKKR 62 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--------~g~iv~~sS~~~-~~~~~~~~~~~~~ 62 (153)
|||||... ..+.|++++++|+.+++.+++.+++.|.+ .++||++||..+ ...+.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------- 156 (256)
T PRK12745 85 VNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPN-------- 156 (256)
T ss_pred EECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCC--------
Confidence 57888632 23779999999999999999999999964 246999999877 33221
Q ss_pred hhccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 63 LMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|+.+|++++.+++.++.++... |+++++|+||.++|++
T Consensus 157 -----------------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~----gi~v~~i~pg~v~t~~ 197 (256)
T PRK12745 157 -----------------------------------RGEYCISKAGLSMAAQLFAARLAEE----GIGVYEVRPGLIKTDM 197 (256)
T ss_pred -----------------------------------CcccHHHHHHHHHHHHHHHHHHHHh----CCEEEEEecCCCcCcc
Confidence 3689999999999999999999887 8999999999999998
Q ss_pred CCCC
Q psy16223 143 SSFM 146 (153)
Q Consensus 143 ~~~~ 146 (153)
....
T Consensus 198 ~~~~ 201 (256)
T PRK12745 198 TAPV 201 (256)
T ss_pred cccc
Confidence 7543
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1e-12 Score=102.37 Aligned_cols=97 Identities=14% Similarity=0.115 Sum_probs=70.8
Q ss_pred CCCCCCCc----cHHHHHHHHhhhhhHHHHHHHHHhhhhcC----Ccc-EEEecCCcccccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP----FAIQAEKTILTNYLGLVRTCVFLFPLLRR----HAR-VVNLSSSAGHLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~----~~~~~~~~~~vN~~g~~~l~~~~lp~l~~----~g~-iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||..+ ..++|++++++|+.|++.+++.++|.|++ +++ ++..+|..+...+.
T Consensus 84 VnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~~----------------- 146 (245)
T PRK12367 84 ILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPAL----------------- 146 (245)
T ss_pred EECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCCC-----------------
Confidence 68998743 24789999999999999999999999954 243 44445544332111
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHH---HHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLT---RIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~---~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..+. +.++.|+.+. |++|+.++||+++|++..
T Consensus 147 --------------------------~~~Y~aSKaal~~~~~l~~~l~~e~~~~----~i~v~~~~pg~~~t~~~~ 192 (245)
T PRK12367 147 --------------------------SPSYEISKRLIGQLVSLKKNLLDKNERK----KLIIRKLILGPFRSELNP 192 (245)
T ss_pred --------------------------CchhHHHHHHHHHHHHHHHHHHHhhccc----ccEEEEecCCCcccccCc
Confidence 357999999986543 3444455566 899999999999999854
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-12 Score=100.17 Aligned_cols=99 Identities=28% Similarity=0.360 Sum_probs=82.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||+|... ..++|++++++|+.+++.+++.+.|.|.+ .+++|++||..+ ...+.
T Consensus 89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---------------- 152 (239)
T PRK07666 89 INNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAV---------------- 152 (239)
T ss_pred EEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCC----------------
Confidence 47777642 23678999999999999999999999854 478999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|+++..+++.++.++.+. ||+++.|+||+++|++....
T Consensus 153 ---------------------------~~~Y~~sK~a~~~~~~~~a~e~~~~----gi~v~~v~pg~v~t~~~~~~ 197 (239)
T PRK07666 153 ---------------------------TSAYSASKFGVLGLTESLMQEVRKH----NIRVTALTPSTVATDMAVDL 197 (239)
T ss_pred ---------------------------CcchHHHHHHHHHHHHHHHHHhhcc----CcEEEEEecCcccCcchhhc
Confidence 3679999999999999999999887 89999999999999986643
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.9e-13 Score=106.91 Aligned_cols=100 Identities=24% Similarity=0.313 Sum_probs=88.0
Q ss_pred CCCCCCCccH---------HHHHHHHhhhhhHHHHHHHHHhhhhc--CCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVPFA---------IQAEKTILTNYLGLVRTCVFLFPLLR--RHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~~~---------~~~~~~~~vN~~g~~~l~~~~lp~l~--~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||+|..... ..++.++.||..+...+++.++|.|- +.|-||+++|.++ ...|.
T Consensus 131 VNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~-------------- 196 (312)
T KOG1014|consen 131 VNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPL-------------- 196 (312)
T ss_pred EecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChh--------------
Confidence 6999987521 36889999999999999999999994 4689999999999 55443
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||+.+..|+++|+.|+..+ ||.|-+|.|+.|.|.|.+...
T Consensus 197 -----------------------------~s~ysasK~~v~~~S~~L~~Ey~~~----gI~Vq~v~p~~VaTkm~~~~~ 242 (312)
T KOG1014|consen 197 -----------------------------LSVYSASKAFVDFFSRCLQKEYESK----GIFVQSVIPYLVATKMAKYRK 242 (312)
T ss_pred -----------------------------HHHHHHHHHHHHHHHHHHHHHHHhc----CeEEEEeehhheeccccccCC
Confidence 4789999999999999999999999 999999999999999997654
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.3e-13 Score=100.86 Aligned_cols=97 Identities=22% Similarity=0.203 Sum_probs=81.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-C--ccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-H--ARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~--g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.+++.+++.+++.+++ + ++||++||..+ .+.+.
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------- 146 (245)
T PRK07060 82 VNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD--------------- 146 (245)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC---------------
Confidence 57887642 23679999999999999999999999864 2 79999999776 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+.+|+++..+++.++.++.+. ||++++|+||+++|++..
T Consensus 147 ----------------------------~~~y~~sK~a~~~~~~~~a~~~~~~----~i~v~~v~pg~v~~~~~~ 189 (245)
T PRK07060 147 ----------------------------HLAYCASKAALDAITRVLCVELGPH----GIRVNSVNPTVTLTPMAA 189 (245)
T ss_pred ----------------------------CcHhHHHHHHHHHHHHHHHHHHhhh----CeEEEEEeeCCCCCchhh
Confidence 3689999999999999999999887 899999999999999854
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-12 Score=102.56 Aligned_cols=97 Identities=21% Similarity=0.241 Sum_probs=81.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+++++++++|+.|++.+++.++|.|++ .++||++||..+ .+.+.
T Consensus 86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~---------------- 149 (280)
T PRK06914 86 VNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPG---------------- 149 (280)
T ss_pred EECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCC----------------
Confidence 47777643 22678999999999999999999999964 479999999766 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+.+|+++..++++++.++... ||+++.|+||+++|++..
T Consensus 150 ---------------------------~~~Y~~sK~~~~~~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~ 192 (280)
T PRK06914 150 ---------------------------LSPYVSSKYALEGFSESLRLELKPF----GIDVALIEPGSYNTNIWE 192 (280)
T ss_pred ---------------------------CchhHHhHHHHHHHHHHHHHHhhhh----CCEEEEEecCCcccchhh
Confidence 3689999999999999999998888 899999999999999764
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.7e-12 Score=100.62 Aligned_cols=102 Identities=24% Similarity=0.215 Sum_probs=81.3
Q ss_pred CCCCCCC-------ccHHHHHHHHhhhhhHHHHHHHHHhhh-hcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTV-------PFAIQAEKTILTNYLGLVRTCVFLFPL-LRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~-------~~~~~~~~~~~vN~~g~~~l~~~~lp~-l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.. ...+.|++++++|+.+++.+++.+.|+ |.+ .+++|++||..+ ...+.
T Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~--------------- 158 (259)
T PRK08213 94 VNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP--------------- 158 (259)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc---------------
Confidence 4777753 123789999999999999999999998 644 379999999766 32211
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
.. .....|+.+|+++..++++++.++... ||++++|+||+++|++...
T Consensus 159 ----------------------~~--~~~~~Y~~sKa~~~~~~~~~a~~~~~~----gi~v~~v~Pg~~~t~~~~~ 206 (259)
T PRK08213 159 ----------------------EV--MDTIAYNTSKGAVINFTRALAAEWGPH----GIRVNAIAPGFFPTKMTRG 206 (259)
T ss_pred ----------------------cc--cCcchHHHHHHHHHHHHHHHHHHhccc----CEEEEEEecCcCCCcchhh
Confidence 00 013689999999999999999999887 8999999999999998654
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.7e-12 Score=101.97 Aligned_cols=98 Identities=18% Similarity=0.215 Sum_probs=80.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+.+++++++|+.|++.+++.++|.|.+ .++||++||..+ ...+.
T Consensus 92 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~---------------- 155 (274)
T PRK07775 92 VSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPH---------------- 155 (274)
T ss_pred EECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC----------------
Confidence 47787642 12678999999999999999999998864 478999999766 32221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|++++.+++.++.++... ||++++|+||+++|++...
T Consensus 156 ---------------------------~~~Y~~sK~a~~~l~~~~~~~~~~~----gi~v~~v~pG~~~t~~~~~ 199 (274)
T PRK07775 156 ---------------------------MGAYGAAKAGLEAMVTNLQMELEGT----GVRASIVHPGPTLTGMGWS 199 (274)
T ss_pred ---------------------------cchHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeCCcccCccccc
Confidence 3679999999999999999998877 8999999999999997643
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-12 Score=101.14 Aligned_cols=97 Identities=21% Similarity=0.189 Sum_probs=80.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhh-cC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLL-RR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l-~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++++.++++|+.+++.+++.+++.| +. .++||++||..+ ...+.
T Consensus 89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~--------------- 153 (262)
T PRK13394 89 VSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPL--------------- 153 (262)
T ss_pred EECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCC---------------
Confidence 57887642 237799999999999999999999999 44 479999999766 32211
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+.+|+++..+++.++.++.+. ||++++|+||+++|++..
T Consensus 154 ----------------------------~~~y~~sk~a~~~~~~~la~~~~~~----~i~v~~v~pg~v~~~~~~ 196 (262)
T PRK13394 154 ----------------------------KSAYVTAKHGLLGLARVLAKEGAKH----NVRSHVVCPGFVRTPLVD 196 (262)
T ss_pred ----------------------------CcccHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcccchhhh
Confidence 3689999999999999999998877 899999999999999754
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.9e-12 Score=100.49 Aligned_cols=98 Identities=27% Similarity=0.314 Sum_probs=81.7
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+.+++.+++|+.+++.+++.++|.|.+ .++||++||..+ ...+.
T Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------- 146 (263)
T PRK06181 83 VNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPT---------------- 146 (263)
T ss_pred EECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCC----------------
Confidence 47777642 33568899999999999999999999864 589999999876 32211
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|++++.+++.++.++... ||+++++.||+++|++.+.
T Consensus 147 ---------------------------~~~Y~~sK~~~~~~~~~l~~~~~~~----~i~~~~i~pg~v~t~~~~~ 190 (263)
T PRK06181 147 ---------------------------RSGYAASKHALHGFFDSLRIELADD----GVAVTVVCPGFVATDIRKR 190 (263)
T ss_pred ---------------------------ccHHHHHHHHHHHHHHHHHHHhhhc----CceEEEEecCccccCcchh
Confidence 3789999999999999999999887 8999999999999998753
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-12 Score=100.20 Aligned_cols=98 Identities=22% Similarity=0.230 Sum_probs=81.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||+|... ..++|++++++|+.+++.+++.+++.|++ .++||++||..+ ...+.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~---------------- 148 (250)
T TIGR03206 85 VNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG---------------- 148 (250)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC----------------
Confidence 57787532 23678999999999999999999999964 478999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|+++..++++++.++... ||+++.|+||+++|++...
T Consensus 149 ---------------------------~~~Y~~sK~a~~~~~~~la~~~~~~----~i~v~~v~pg~~~~~~~~~ 192 (250)
T TIGR03206 149 ---------------------------EAVYAACKGGLVAFSKTMAREHARH----GITVNVVCPGPTDTALLDD 192 (250)
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHHhHh----CcEEEEEecCcccchhHHh
Confidence 3689999999999999999999877 8999999999999997654
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.6e-12 Score=103.64 Aligned_cols=105 Identities=18% Similarity=0.057 Sum_probs=89.0
Q ss_pred CCCCCCCccH-------HHHHHHHhhhhhHHHHHHHHHhhhhcCC---ccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPFA-------IQAEKTILTNYLGLVRTCVFLFPLLRRH---ARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~~-------~~~~~~~~vN~~g~~~l~~~~lp~l~~~---g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||..... +.++..+++|++|++.++++.+|.|+.. |+|+.+||..+ .+..+
T Consensus 117 ~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~G--------------- 181 (331)
T KOG1210|consen 117 FCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYG--------------- 181 (331)
T ss_pred EEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccc---------------
Confidence 4788875322 7799999999999999999999999763 69999999988 54432
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMGNV 149 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~ 149 (153)
..+|+++|+|+..+...|++|+... ||+|..+.|+.++||...+....
T Consensus 182 ----------------------------ysaYs~sK~alrgLa~~l~qE~i~~----~v~Vt~~~P~~~~tpGfE~En~t 229 (331)
T KOG1210|consen 182 ----------------------------YSAYSPSKFALRGLAEALRQELIKY----GVHVTLYYPPDTLTPGFERENKT 229 (331)
T ss_pred ----------------------------ccccccHHHHHHHHHHHHHHHHhhc----ceEEEEEcCCCCCCCcccccccc
Confidence 5899999999999999999999998 99999999999999977666544
Q ss_pred CCC
Q psy16223 150 NIF 152 (153)
Q Consensus 150 ~~~ 152 (153)
.||
T Consensus 230 kP~ 232 (331)
T KOG1210|consen 230 KPE 232 (331)
T ss_pred Cch
Confidence 444
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.5e-12 Score=98.44 Aligned_cols=99 Identities=27% Similarity=0.343 Sum_probs=81.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHh-hhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLF-PLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~l-p~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|+.++++|+.+++.+++.+. |.|++ .+++|++||..+ ...+.
T Consensus 92 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------- 156 (249)
T PRK12827 92 VNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG--------------- 156 (249)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC---------------
Confidence 57888653 236799999999999999999999 66654 378999999876 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|+++..+++.++.++... |+++++|+||+++|++....
T Consensus 157 ----------------------------~~~y~~sK~a~~~~~~~l~~~~~~~----~i~~~~i~pg~v~t~~~~~~ 201 (249)
T PRK12827 157 ----------------------------QVNYAASKAGLIGLTKTLANELAPR----GITVNAVAPGAINTPMADNA 201 (249)
T ss_pred ----------------------------CchhHHHHHHHHHHHHHHHHHhhhh----CcEEEEEEECCcCCCccccc
Confidence 3689999999999999999998877 89999999999999986543
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.1e-12 Score=99.67 Aligned_cols=96 Identities=19% Similarity=0.148 Sum_probs=74.1
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHP 88 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (153)
+.|+.++++|+.+++.+++.++|.|++ .++||++||..+...+.. + .+...
T Consensus 108 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~----~~~~~---------------------- 160 (256)
T PRK09186 108 DDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-E----IYEGT---------------------- 160 (256)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-h----hcccc----------------------
Confidence 779999999999999999999999964 479999999776321110 0 00000
Q ss_pred CccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 89 RAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 89 ~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
.......|++||+++++++++++.++.+. ||++++|+||++.|+.
T Consensus 161 -----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~----~i~v~~i~Pg~~~~~~ 205 (256)
T PRK09186 161 -----SMTSPVEYAAIKAGIIHLTKYLAKYFKDS----NIRVNCVSPGGILDNQ 205 (256)
T ss_pred -----ccCCcchhHHHHHHHHHHHHHHHHHhCcC----CeEEEEEecccccCCC
Confidence 00012469999999999999999999887 8999999999998765
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.9e-12 Score=97.99 Aligned_cols=100 Identities=26% Similarity=0.311 Sum_probs=82.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||+|... ..++++.++++|+.+++.+++.++|.|.+ .+++|++||..+ .+.+.
T Consensus 88 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~---------------- 151 (247)
T PRK05565 88 VNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASC---------------- 151 (247)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCC----------------
Confidence 46777642 23779999999999999999999999965 478999999776 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|+.+|+++..+++.++.++... |+++++|+||+++|++.+...
T Consensus 152 ---------------------------~~~y~~sK~a~~~~~~~~~~~~~~~----gi~~~~v~pg~v~t~~~~~~~ 197 (247)
T PRK05565 152 ---------------------------EVLYSASKGAVNAFTKALAKELAPS----GIRVNAVAPGAIDTEMWSSFS 197 (247)
T ss_pred ---------------------------ccHHHHHHHHHHHHHHHHHHHHHHc----CeEEEEEEECCccCccccccC
Confidence 3689999999999999999999877 899999999999999876543
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.6e-12 Score=98.98 Aligned_cols=97 Identities=26% Similarity=0.313 Sum_probs=81.1
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++++.++++|+.+++.+++.+++.|++ .++||++||..+ .+.+.
T Consensus 86 i~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~---------------- 149 (258)
T PRK12429 86 VNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAG---------------- 149 (258)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC----------------
Confidence 467775322 3678999999999999999999999964 479999999876 43222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+.+|+++..+++.++.++... ||++++|+||+++|++..
T Consensus 150 ---------------------------~~~y~~~k~a~~~~~~~l~~~~~~~----~i~v~~~~pg~v~~~~~~ 192 (258)
T PRK12429 150 ---------------------------KAAYVSAKHGLIGLTKVVALEGATH----GVTVNAICPGYVDTPLVR 192 (258)
T ss_pred ---------------------------cchhHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCCCcchhhh
Confidence 4789999999999999999999877 899999999999998864
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.1e-12 Score=99.21 Aligned_cols=94 Identities=20% Similarity=0.133 Sum_probs=76.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCccc-ccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGH-LSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.+++.|.+ .++||+++|..+. ..+.
T Consensus 92 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~---------------- 155 (258)
T PRK09134 92 VNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPD---------------- 155 (258)
T ss_pred EECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCC----------------
Confidence 57888642 23679999999999999999999999965 4789999886542 2221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|+.+|++++.++++++.++.. +|+|++|+||++.|..
T Consensus 156 ---------------------------~~~Y~~sK~a~~~~~~~la~~~~~-----~i~v~~i~PG~v~t~~ 195 (258)
T PRK09134 156 ---------------------------FLSYTLSKAALWTATRTLAQALAP-----RIRVNAIGPGPTLPSG 195 (258)
T ss_pred ---------------------------chHHHHHHHHHHHHHHHHHHHhcC-----CcEEEEeecccccCCc
Confidence 358999999999999999999864 4999999999998865
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.4e-12 Score=96.58 Aligned_cols=98 Identities=24% Similarity=0.264 Sum_probs=80.5
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-----CccEEEecCCcc-cccccccHHHHhhhhcc
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-----HARVVNLSSSAG-HLSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~ 66 (153)
|||||... ..++|+.++++|+.+++.+++.+++.|.+ ++++|++||..+ ...+.
T Consensus 84 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~------------ 151 (247)
T PRK09730 84 VNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG------------ 151 (247)
T ss_pred EECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC------------
Confidence 47887641 23679999999999999999999999854 368999999876 33221
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
. ...|+.+|+++..+++.++.++.+. ||++++|+||+++|++..
T Consensus 152 ----------------------------~--~~~Y~~sK~~~~~~~~~l~~~~~~~----~i~v~~i~pg~~~~~~~~ 195 (247)
T PRK09730 152 ----------------------------E--YVDYAASKGAIDTLTTGLSLEVAAQ----GIRVNCVRPGFIYTEMHA 195 (247)
T ss_pred ----------------------------c--ccchHhHHHHHHHHHHHHHHHHHHh----CeEEEEEEeCCCcCcccc
Confidence 0 2469999999999999999999887 899999999999999754
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.7e-12 Score=111.99 Aligned_cols=93 Identities=18% Similarity=0.134 Sum_probs=79.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|+.++++|+.+++.+++.+++.|++ +++||++||..+ ...+.
T Consensus 498 V~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~--------------- 562 (676)
T TIGR02632 498 VNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN--------------- 562 (676)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC---------------
Confidence 588987421 2679999999999999999999999964 468999999876 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVAT 140 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T 140 (153)
...|++||++++.++++++.++... ||+||+|+||+|.|
T Consensus 563 ----------------------------~~aY~aSKaA~~~l~r~lA~el~~~----gIrVn~V~Pg~V~~ 601 (676)
T TIGR02632 563 ----------------------------ASAYSAAKAAEAHLARCLAAEGGTY----GIRVNTVNPDAVLQ 601 (676)
T ss_pred ----------------------------CHHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEECCceec
Confidence 4789999999999999999999888 99999999999865
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1e-11 Score=95.78 Aligned_cols=98 Identities=22% Similarity=0.291 Sum_probs=81.2
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||+|... ..+++++++++|+.|++.+++.+++.|+. .++||++||..+ ...+.
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---------------- 142 (256)
T PRK08017 79 FNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPG---------------- 142 (256)
T ss_pred EECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCC----------------
Confidence 46777542 23678999999999999999999999965 478999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|+++..++++++.++... |++++.|.||+++|++...
T Consensus 143 ---------------------------~~~Y~~sK~~~~~~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~~ 186 (256)
T PRK08017 143 ---------------------------RGAYAASKYALEAWSDALRMELRHS----GIKVSLIEPGPIRTRFTDN 186 (256)
T ss_pred ---------------------------ccHHHHHHHHHHHHHHHHHHHHhhc----CCEEEEEeCCCcccchhhc
Confidence 3689999999999999999998887 8999999999999987654
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.1e-11 Score=94.66 Aligned_cols=99 Identities=22% Similarity=0.229 Sum_probs=82.6
Q ss_pred CCCCCC-C-------ccHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRAST-V-------PFAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~-~-------~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
||+||. . ...+++++++++|+.+++.+++.++|.|++ .+++|++||..+ ...+.
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~--------------- 142 (238)
T PRK08264 78 VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPN--------------- 142 (238)
T ss_pred EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCC---------------
Confidence 477776 2 123789999999999999999999999864 478999999776 32211
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|+++..+++.++.++.+. |++++.+.||.++|++....
T Consensus 143 ----------------------------~~~y~~sK~a~~~~~~~l~~~~~~~----~i~~~~v~pg~v~t~~~~~~ 187 (238)
T PRK08264 143 ----------------------------LGTYSASKAAAWSLTQALRAELAPQ----GTRVLGVHPGPIDTDMAAGL 187 (238)
T ss_pred ----------------------------chHhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeCCcccccccccC
Confidence 3689999999999999999999887 89999999999999987654
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.5e-12 Score=96.51 Aligned_cols=97 Identities=20% Similarity=0.170 Sum_probs=80.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||+|... ..++|++.+++|+.+++.+++.+++.+.+ .++||++||..+....
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------------ 143 (257)
T PRK07074 82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL------------------ 143 (257)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC------------------
Confidence 46777642 22678999999999999999999999854 4789999996653211
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....|+.+|+++..++++++.++... ||+|++++||+++|++..
T Consensus 144 -------------------------~~~~y~~sK~a~~~~~~~~a~~~~~~----gi~v~~v~pg~v~t~~~~ 187 (257)
T PRK07074 144 -------------------------GHPAYSAAKAGLIHYTKLLAVEYGRF----GIRANAVAPGTVKTQAWE 187 (257)
T ss_pred -------------------------CCcccHHHHHHHHHHHHHHHHHHhHh----CeEEEEEEeCcCCcchhh
Confidence 13679999999999999999999988 999999999999999854
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=4e-12 Score=97.73 Aligned_cols=103 Identities=15% Similarity=0.060 Sum_probs=79.6
Q ss_pred CCCCCCCcc-HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHH
Q psy16223 1 MNRASTVPF-AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYE 79 (153)
Q Consensus 1 innag~~~~-~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (153)
|||||.... ...++..+++|+.|++.+++.+.|.|.++++||++||..+...+.
T Consensus 89 i~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~------------------------- 143 (248)
T PRK07806 89 VLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT------------------------- 143 (248)
T ss_pred EECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc-------------------------
Confidence 477775422 224678899999999999999999998778999999965421110
Q ss_pred HHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 80 FMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...... ...|+.||++++.+++.++.++... ||++++|+||+++|++..
T Consensus 144 ----------~~~~~~--~~~Y~~sK~a~e~~~~~l~~~~~~~----~i~v~~v~pg~~~~~~~~ 192 (248)
T PRK07806 144 ----------VKTMPE--YEPVARSKRAGEDALRALRPELAEK----GIGFVVVSGDMIEGTVTA 192 (248)
T ss_pred ----------ccCCcc--ccHHHHHHHHHHHHHHHHHHHhhcc----CeEEEEeCCccccCchhh
Confidence 000001 3689999999999999999999988 999999999999998754
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.9e-11 Score=93.27 Aligned_cols=99 Identities=24% Similarity=0.254 Sum_probs=81.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCccc-ccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAGH-LSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~ 71 (153)
||++|... ..+++++++++|+.+++.+++++++.|++ .++||++||..+. ...
T Consensus 87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------------ 148 (237)
T PRK07326 87 IANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFA------------------ 148 (237)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCC------------------
Confidence 46777542 23678999999999999999999999843 5789999997663 211
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
....|+.+|+++..+++.++.++... |+++++|+||++.|++....
T Consensus 149 -------------------------~~~~y~~sk~a~~~~~~~~~~~~~~~----gi~v~~v~pg~~~t~~~~~~ 194 (237)
T PRK07326 149 -------------------------GGAAYNASKFGLVGFSEAAMLDLRQY----GIKVSTIMPGSVATHFNGHT 194 (237)
T ss_pred -------------------------CCchHHHHHHHHHHHHHHHHHHhccc----CcEEEEEeeccccCcccccc
Confidence 13679999999999999999999877 89999999999999986543
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.2e-11 Score=108.86 Aligned_cols=97 Identities=14% Similarity=0.123 Sum_probs=82.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.+++.|++ +++||++||..+ ...+.
T Consensus 503 I~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~--------------- 567 (681)
T PRK08324 503 VSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPN--------------- 567 (681)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCC---------------
Confidence 57888642 23789999999999999999999999976 589999999876 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc--cCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV--ATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v--~T~~~~ 144 (153)
...|+++|+++..++++++.++... ||++++|+||.| .|.+..
T Consensus 568 ----------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gIrvn~v~Pg~v~~~t~~~~ 612 (681)
T PRK08324 568 ----------------------------FGAYGAAKAAELHLVRQLALELGPD----GIRVNGVNPDAVVRGSGIWT 612 (681)
T ss_pred ----------------------------cHHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeCceeecCCcccc
Confidence 3789999999999999999999887 899999999999 888754
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.7e-11 Score=93.52 Aligned_cols=99 Identities=25% Similarity=0.359 Sum_probs=81.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCC--ccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRH--ARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~--g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
||+||... ..+++++++++|+.+++.+.+.+++.+.+. +++|++||..+ .+.+.
T Consensus 88 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~---------------- 151 (248)
T PRK05557 88 VNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG---------------- 151 (248)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC----------------
Confidence 46676532 236799999999999999999999998653 78999999865 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|+++..+++.++.++... |+++++|+||+++|++....
T Consensus 152 ---------------------------~~~y~~sk~a~~~~~~~~a~~~~~~----~i~~~~v~pg~~~~~~~~~~ 196 (248)
T PRK05557 152 ---------------------------QANYAASKAGVIGFTKSLARELASR----GITVNAVAPGFIETDMTDAL 196 (248)
T ss_pred ---------------------------CchhHHHHHHHHHHHHHHHHHhhhh----CeEEEEEecCccCCcccccc
Confidence 3689999999999999999999887 89999999999999987653
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.1e-11 Score=92.14 Aligned_cols=89 Identities=16% Similarity=0.171 Sum_probs=75.9
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
+.++.++++|+.+++.+.+.++|.|++++++|++||..+...+.
T Consensus 101 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------------------------------ 144 (238)
T PRK05786 101 SGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKAS------------------------------------ 144 (238)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCC------------------------------------
Confidence 67899999999999999999999998889999999976521110
Q ss_pred cccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 91 HVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 91 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
-....|+.+|+++..+++.++.++... ||++++|+||+++|++..
T Consensus 145 -----~~~~~Y~~sK~~~~~~~~~~~~~~~~~----gi~v~~i~pg~v~~~~~~ 189 (238)
T PRK05786 145 -----PDQLSYAVAKAGLAKAVEILASELLGR----GIRVNGIAPTTISGDFEP 189 (238)
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCccCCCCCc
Confidence 013679999999999999999999877 899999999999998753
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.2e-11 Score=91.72 Aligned_cols=99 Identities=26% Similarity=0.378 Sum_probs=82.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||+|... ..+.+++++++|+.+++.+++.+.+.+.+ .++++++||..+ .+.+.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~---------------- 144 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG---------------- 144 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC----------------
Confidence 46777642 23779999999999999999999998854 479999999876 43222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|.++..+++.++.++... |++++.++||+++|++....
T Consensus 145 ---------------------------~~~y~~~k~a~~~~~~~l~~~~~~~----g~~~~~i~pg~~~~~~~~~~ 189 (239)
T TIGR01830 145 ---------------------------QANYAASKAGVIGFTKSLAKELASR----NITVNAVAPGFIDTDMTDKL 189 (239)
T ss_pred ---------------------------CchhHHHHHHHHHHHHHHHHHHhhc----CeEEEEEEECCCCChhhhhc
Confidence 3689999999999999999998877 89999999999999876543
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.6e-11 Score=91.61 Aligned_cols=99 Identities=27% Similarity=0.312 Sum_probs=82.2
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
||+||... ..+.++.++++|+.+.+.+++.+.+.+++ .+++|++||..+ ...+.
T Consensus 89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~---------------- 152 (249)
T PRK12825 89 VNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPG---------------- 152 (249)
T ss_pred EECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCC----------------
Confidence 46777532 23678999999999999999999999865 368999999876 33211
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+.+|+++.++++.+++++... |++++.|+||++.|++....
T Consensus 153 ---------------------------~~~y~~sK~~~~~~~~~~~~~~~~~----~i~~~~i~pg~~~~~~~~~~ 197 (249)
T PRK12825 153 ---------------------------RSNYAAAKAGLVGLTKALARELAEY----GITVNMVAPGDIDTDMKEAT 197 (249)
T ss_pred ---------------------------chHHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEEECCccCCccccc
Confidence 3689999999999999999999887 89999999999999987653
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.2e-11 Score=88.19 Aligned_cols=74 Identities=28% Similarity=0.313 Sum_probs=64.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..++|++++++|+.+++.+.+.++| +.+++||++||..+ .+.+.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~------------------ 144 (167)
T PF00106_consen 85 INNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISSIAGVRGSPG------------------ 144 (167)
T ss_dssp EEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEEGGGTSSSTT------------------
T ss_pred ccccccccccccccccchhhhhccccccceeeeeeehhee--ccccceEEecchhhccCCCC------------------
Confidence 57888764 2378999999999999999999999 77899999999998 55443
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHh
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKF 119 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~ 119 (153)
+..|+++|+++.+|++++++|+
T Consensus 145 -------------------------~~~Y~askaal~~~~~~la~e~ 166 (167)
T PF00106_consen 145 -------------------------MSAYSASKAALRGLTQSLAAEL 166 (167)
T ss_dssp -------------------------BHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------ChhHHHHHHHHHHHHHHHHHhc
Confidence 4799999999999999999997
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.4e-13 Score=98.15 Aligned_cols=90 Identities=20% Similarity=0.204 Sum_probs=78.8
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhhcC--------CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 10 AIQAEKTILTNYLGLVRTCVFLFPLLRR--------HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 10 ~~~~~~~~~vN~~g~~~l~~~~lp~l~~--------~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
.|++++++++|++|+|.+.+...-.|.. .|.||+..|..+ .+.-
T Consensus 110 ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~--------------------------- 162 (260)
T KOG1199|consen 110 LEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQT--------------------------- 162 (260)
T ss_pred HHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCcc---------------------------
Confidence 3889999999999999999998888843 278999999887 4422
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
+..+|++||.++..++--+++++... |||++.|.||..+|||....
T Consensus 163 ----------------gqaaysaskgaivgmtlpiardla~~----gir~~tiapglf~tpllssl 208 (260)
T KOG1199|consen 163 ----------------GQAAYSASKGAIVGMTLPIARDLAGD----GIRFNTIAPGLFDTPLLSSL 208 (260)
T ss_pred ----------------chhhhhcccCceEeeechhhhhcccC----ceEEEeecccccCChhhhhh
Confidence 25899999999999999999999998 99999999999999998654
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.6e-11 Score=90.62 Aligned_cols=96 Identities=25% Similarity=0.364 Sum_probs=78.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+++++++++|+.|++.+++.+++.|++ .+++|++||..+ ...+.
T Consensus 83 i~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~---------------- 146 (255)
T TIGR01963 83 VNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPF---------------- 146 (255)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCC----------------
Confidence 46676532 23678999999999999999999999964 368999998765 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|+.+|.++..+++.++.++... ||+++.++||++.|++.
T Consensus 147 ---------------------------~~~y~~sk~a~~~~~~~~~~~~~~~----~i~v~~i~pg~v~~~~~ 188 (255)
T TIGR01963 147 ---------------------------KSAYVAAKHGLIGLTKVLALEVAAH----GITVNAICPGYVRTPLV 188 (255)
T ss_pred ---------------------------CchhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCccccHHH
Confidence 3689999999999999999998877 89999999999999874
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1e-10 Score=90.48 Aligned_cols=98 Identities=28% Similarity=0.235 Sum_probs=79.4
Q ss_pred CCCCCCC-c-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCC---ccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTV-P-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRH---ARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~-~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~---g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
||+||.. + ..+.|++++++|+.+++.+++.+++.|+.. ++|+++||..+ .+.+.
T Consensus 91 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~-------------- 156 (264)
T PRK12829 91 VNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPG-------------- 156 (264)
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCC--------------
Confidence 4677765 1 237899999999999999999999988553 56888888665 33221
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|+++..+++.++.++... ++++++|.||+++|++...
T Consensus 157 -----------------------------~~~y~~~K~a~~~~~~~l~~~~~~~----~i~~~~l~pg~v~~~~~~~ 200 (264)
T PRK12829 157 -----------------------------RTPYAASKWAVVGLVKSLAIELGPL----GIRVNAILPGIVRGPRMRR 200 (264)
T ss_pred -----------------------------CchhHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCCcCChHHHH
Confidence 3579999999999999999999877 8999999999999987643
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.4e-10 Score=88.78 Aligned_cols=97 Identities=21% Similarity=0.215 Sum_probs=77.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++++.++++|+.|++.+.+.+.|.|.+ ++.+++++|..+ ...+
T Consensus 90 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 151 (249)
T PRK09135 90 VNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLK------------------ 151 (249)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCC------------------
Confidence 47887532 23678999999999999999999999865 578888777544 2211
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
+...|+.||+++..+++.++.++.. ++++++|.||++.|++...
T Consensus 152 -------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~-----~i~~~~v~pg~~~~~~~~~ 195 (249)
T PRK09135 152 -------------------------GYPVYCAAKAALEMLTRSLALELAP-----EVRVNAVAPGAILWPEDGN 195 (249)
T ss_pred -------------------------CchhHHHHHHHHHHHHHHHHHHHCC-----CCeEEEEEeccccCccccc
Confidence 1378999999999999999999854 5999999999999998643
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.3e-10 Score=87.10 Aligned_cols=98 Identities=24% Similarity=0.351 Sum_probs=80.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCC--ccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRH--ARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~--g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
||++|... ..++++..+++|+.+.+.+++.+.|.|++. ++||++||..+ .+..
T Consensus 87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~----------------- 149 (246)
T PRK05653 87 VNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNP----------------- 149 (246)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCC-----------------
Confidence 46666542 236789999999999999999999999653 69999999766 3211
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
....|+.+|.++..+++++++++... |+++++|+||.+.|++...
T Consensus 150 --------------------------~~~~y~~sk~~~~~~~~~l~~~~~~~----~i~~~~i~pg~~~~~~~~~ 194 (246)
T PRK05653 150 --------------------------GQTNYSAAKAGVIGFTKALALELASR----GITVNAVAPGFIDTDMTEG 194 (246)
T ss_pred --------------------------CCcHhHhHHHHHHHHHHHHHHHHhhc----CeEEEEEEeCCcCCcchhh
Confidence 13679999999999999999998877 8999999999999988753
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.6e-10 Score=87.31 Aligned_cols=101 Identities=31% Similarity=0.319 Sum_probs=81.6
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||+|.... .++++..+++|+.+++.+++.++|.|.+ .+++|++||..+...+.
T Consensus 88 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~----------------- 150 (251)
T PRK12826 88 VANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGY----------------- 150 (251)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCC-----------------
Confidence 467766432 3678999999999999999999999854 47899999977641111
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
-....|+.+|+++..+++.++.++... |++++.|+||.++|++.+..
T Consensus 151 ------------------------~~~~~y~~sK~a~~~~~~~~~~~~~~~----~i~~~~i~pg~~~~~~~~~~ 197 (251)
T PRK12826 151 ------------------------PGLAHYAASKAGLVGFTRALALELAAR----NITVNSVHPGGVDTPMAGNL 197 (251)
T ss_pred ------------------------CCccHHHHHHHHHHHHHHHHHHHHHHc----CeEEEEEeeCCCCcchhhhc
Confidence 013689999999999999999999877 89999999999999976543
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.6e-10 Score=85.85 Aligned_cols=88 Identities=23% Similarity=0.214 Sum_probs=75.4
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEH 87 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (153)
+.+++++++|+.+++.+++.+++.|+. .++||++||..+ ...+.
T Consensus 104 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------------------------- 150 (239)
T PRK12828 104 DTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPG--------------------------------- 150 (239)
T ss_pred HHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCC---------------------------------
Confidence 678899999999999999999999854 479999999876 32211
Q ss_pred CCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 88 PRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 88 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|.++..+++.++.++... |++++.|.||++.|++...
T Consensus 151 ----------~~~y~~sk~a~~~~~~~~a~~~~~~----~i~~~~i~pg~v~~~~~~~ 194 (239)
T PRK12828 151 ----------MGAYAAAKAGVARLTEALAAELLDR----GITVNAVLPSIIDTPPNRA 194 (239)
T ss_pred ----------cchhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCcccCcchhh
Confidence 3689999999999999999998877 8999999999999987543
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.6e-09 Score=81.93 Aligned_cols=96 Identities=25% Similarity=0.324 Sum_probs=77.2
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCccc-ccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAGH-LSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~ 71 (153)
||++|... ..++|.+++++|+.+.+.+++.+++.|++ .+++|++||..+. ..+
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~------------------ 137 (227)
T PRK08219 76 VHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANP------------------ 137 (227)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCC------------------
Confidence 46776532 23678999999999999999999999865 5799999997763 211
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....|+.+|.++..+++.++.++.. .+++++|.||+++|++..
T Consensus 138 -------------------------~~~~y~~~K~a~~~~~~~~~~~~~~-----~i~~~~i~pg~~~~~~~~ 180 (227)
T PRK08219 138 -------------------------GWGSYAASKFALRALADALREEEPG-----NVRVTSVHPGRTDTDMQR 180 (227)
T ss_pred -------------------------CCchHHHHHHHHHHHHHHHHHHhcC-----CceEEEEecCCccchHhh
Confidence 1368999999999999999887653 299999999999998654
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.5e-09 Score=103.51 Aligned_cols=93 Identities=17% Similarity=-0.001 Sum_probs=78.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||+... .++|+++|++|+.|.+.+++.+.+.+. ++||++||..+ .+.++
T Consensus 2126 VhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~~--~~IV~~SSvag~~G~~g------------------ 2185 (2582)
T TIGR02813 2126 IHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAENI--KLLALFSSAAGFYGNTG------------------ 2185 (2582)
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEechhhcCCCCC------------------
Confidence 689998532 378999999999999999999877654 47999999888 44322
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|.+++.+++.++.++. +++|++|+||+++|+|..
T Consensus 2186 -------------------------qs~YaaAkaaL~~la~~la~~~~------~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813 2186 -------------------------QSDYAMSNDILNKAALQLKALNP------SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred -------------------------cHHHHHHHHHHHHHHHHHHHHcC------CcEEEEEECCeecCCccc
Confidence 46899999999999999998873 599999999999999864
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.1e-08 Score=85.24 Aligned_cols=93 Identities=16% Similarity=0.131 Sum_probs=68.1
Q ss_pred CCCCCCCc----cHHHHHHHHhhhhhHHHHHHHHHhhhhcCC------ccEEEecCCcccccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP----FAIQAEKTILTNYLGLVRTCVFLFPLLRRH------ARVVNLSSSAGHLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~----~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~------g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..+++++++++|+.|++.+++.++|.|++. +.+|++|+ .+...+.
T Consensus 250 InnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~~~~---------------- 312 (406)
T PRK07424 250 IINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVNPAF---------------- 312 (406)
T ss_pred EECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccccCCC----------------
Confidence 58898753 236899999999999999999999999642 23566554 3221111
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+|+..++. +.++ .. ++.|..++||+++|+|..
T Consensus 313 ---------------------------~~~Y~ASKaAl~~l~~-l~~~--~~----~~~I~~i~~gp~~t~~~~ 352 (406)
T PRK07424 313 ---------------------------SPLYELSKRALGDLVT-LRRL--DA----PCVVRKLILGPFKSNLNP 352 (406)
T ss_pred ---------------------------chHHHHHHHHHHHHHH-HHHh--CC----CCceEEEEeCCCcCCCCc
Confidence 3579999999999974 4433 23 578888999999999864
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.5e-08 Score=78.00 Aligned_cols=91 Identities=14% Similarity=0.116 Sum_probs=78.3
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCC
Q psy16223 10 AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHP 88 (153)
Q Consensus 10 ~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (153)
.|+|...+++..++...++|.+.|.|..+|.||-++=..+ +..|.
T Consensus 109 re~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPn---------------------------------- 154 (259)
T COG0623 109 REGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPN---------------------------------- 154 (259)
T ss_pred HHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCC----------------------------------
Confidence 3889999999999999999999999999999998886555 43332
Q ss_pred CccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 89 RAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 89 ~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
+...+++|++++.-+|.|+.++.++ |||||+|+-|+|+|-..+...
T Consensus 155 ---------YNvMGvAKAaLEasvRyLA~dlG~~----gIRVNaISAGPIrTLAasgI~ 200 (259)
T COG0623 155 ---------YNVMGVAKAALEASVRYLAADLGKE----GIRVNAISAGPIRTLAASGIG 200 (259)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHhCcc----CeEEeeecccchHHHHhhccc
Confidence 2467999999999999999999998 999999999999997665543
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.9e-07 Score=65.92 Aligned_cols=86 Identities=14% Similarity=0.014 Sum_probs=65.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||+|... ..++++.++++|+.+++.+.+.+.+ ...++++++||..+ ...+.
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~ii~~ss~~~~~~~~~------------------ 145 (180)
T smart00822 86 IHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD--LPLDFFVLFSSVAGVLGNPG------------------ 145 (180)
T ss_pred EEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc--CCcceEEEEccHHHhcCCCC------------------
Confidence 46777532 1267999999999999999998843 23478999999776 33221
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCccc
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVA 139 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~ 139 (153)
...|+.+|.++..+++.++. . |+.+.++.||+++
T Consensus 146 -------------------------~~~y~~sk~~~~~~~~~~~~----~----~~~~~~~~~g~~~ 179 (180)
T smart00822 146 -------------------------QANYAAANAFLDALAAHRRA----R----GLPATSINWGAWA 179 (180)
T ss_pred -------------------------chhhHHHHHHHHHHHHHHHh----c----CCceEEEeecccc
Confidence 36899999999998877644 3 7889999999864
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >KOG1478|consensus | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.3e-07 Score=74.15 Aligned_cols=100 Identities=24% Similarity=0.159 Sum_probs=78.9
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhhcCC--ccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcC
Q psy16223 10 AIQAEKTILTNYLGLVRTCVFLFPLLRRH--ARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEH 87 (153)
Q Consensus 10 ~~~~~~~~~vN~~g~~~l~~~~lp~l~~~--g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (153)
.|++..+|++|++|||.+.+.+.|.+..+ -.+|.+||..++.... +.+++...
T Consensus 137 ~D~lg~iFetnVFGhfyli~~l~pll~~~~~~~lvwtSS~~a~kk~l--------------sleD~q~~----------- 191 (341)
T KOG1478|consen 137 ADGLGEIFETNVFGHFYLIRELEPLLCHSDNPQLVWTSSRMARKKNL--------------SLEDFQHS----------- 191 (341)
T ss_pred ccchhhHhhhcccchhhhHhhhhhHhhcCCCCeEEEEeecccccccC--------------CHHHHhhh-----------
Confidence 37899999999999999999999999653 4899999988854322 22222111
Q ss_pred CCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 88 PRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 88 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
-+...|..||.++..+.-++-+.+.+. |+.-++|+||..-|.+....
T Consensus 192 --------kg~~pY~sSKrl~DlLh~A~~~~~~~~----g~~qyvv~pg~~tt~~~~~~ 238 (341)
T KOG1478|consen 192 --------KGKEPYSSSKRLTDLLHVALNRNFKPL----GINQYVVQPGIFTTNSFSEY 238 (341)
T ss_pred --------cCCCCcchhHHHHHHHHHHHhcccccc----chhhhcccCceeecchhhhh
Confidence 113689999999999988888888887 89999999999988876544
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.1e-06 Score=70.97 Aligned_cols=90 Identities=18% Similarity=0.099 Sum_probs=69.5
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||.... ....+.++++|+.|++.+++++.+. .-++||++||..... |
T Consensus 79 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~--~~~~iV~~SS~~~~~-p------------------------ 131 (324)
T TIGR03589 79 VHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN--GVKRVVALSTDKAAN-P------------------------ 131 (324)
T ss_pred EECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeCCCCCC-C------------------------
Confidence 477876422 1234679999999999999998763 236899999854321 1
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
...|+.||++.+.+++.++.+.... |+++++|.||.+..+
T Consensus 132 --------------------~~~Y~~sK~~~E~l~~~~~~~~~~~----gi~~~~lR~g~v~G~ 171 (324)
T TIGR03589 132 --------------------INLYGATKLASDKLFVAANNISGSK----GTRFSVVRYGNVVGS 171 (324)
T ss_pred --------------------CCHHHHHHHHHHHHHHHHHhhcccc----CcEEEEEeecceeCC
Confidence 2679999999999999988877766 899999999998765
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=9.3e-06 Score=70.37 Aligned_cols=95 Identities=11% Similarity=0.037 Sum_probs=68.4
Q ss_pred CCCCCCCccH-HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHH
Q psy16223 1 MNRASTVPFA-IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYE 79 (153)
Q Consensus 1 innag~~~~~-~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (153)
|||+|..... .++...+++|+.|+..+++++... ..++||++||..+.....
T Consensus 164 Vn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a--gVgRIV~VSSiga~~~g~------------------------- 216 (576)
T PLN03209 164 ICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA--KVNHFILVTSLGTNKVGF------------------------- 216 (576)
T ss_pred EEccccccccccchhhHHHHHHHHHHHHHHHHHHh--CCCEEEEEccchhcccCc-------------------------
Confidence 4777765321 357788999999999999887543 237999999976521100
Q ss_pred HHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 80 FMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....|. +|.++..+.+.+..++... ||+++.|+||++.|++..
T Consensus 217 -----------------p~~~~~-sk~~~~~~KraaE~~L~~s----GIrvTIVRPG~L~tp~d~ 259 (576)
T PLN03209 217 -----------------PAAILN-LFWGVLCWKRKAEEALIAS----GLPYTIVRPGGMERPTDA 259 (576)
T ss_pred -----------------cccchh-hHHHHHHHHHHHHHHHHHc----CCCEEEEECCeecCCccc
Confidence 011243 6777777888888888777 899999999999988654
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.93 E-value=4.5e-05 Score=61.84 Aligned_cols=110 Identities=17% Similarity=0.065 Sum_probs=70.4
Q ss_pred CCCCCCCc---cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVP---FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~---~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+|+... ..+++..++++|+.|++.+++.+.. +...+++|++||....+.+... ....
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~-~~~~~~iv~~SS~~vyg~~~~~---------~~~~-------- 141 (349)
T TIGR02622 80 FHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRA-IGSVKAVVNVTSDKCYRNDEWV---------WGYR-------- 141 (349)
T ss_pred EECCcccccccchhCHHHHHHHhHHHHHHHHHHHHh-cCCCCEEEEEechhhhCCCCCC---------CCCc--------
Confidence 46776432 2246788999999999999998743 3224689999996543211000 0000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
..... .+...|+.+|.+.+.+++.++.++.+...-.|++++.+.||.+..+
T Consensus 142 -----------e~~~~--~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp 192 (349)
T TIGR02622 142 -----------ETDPL--GGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGG 192 (349)
T ss_pred -----------cCCCC--CCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCC
Confidence 00001 1236899999999999999988775410001699999999988765
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >KOG4022|consensus | Back alignment and domain information |
|---|
Probab=97.91 E-value=7.2e-05 Score=55.44 Aligned_cols=95 Identities=13% Similarity=-0.027 Sum_probs=72.0
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCC
Q psy16223 10 AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHP 88 (153)
Q Consensus 10 ~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (153)
....+-+++-.+....+-.+..-.+|+++|-+.......+ .+.|+
T Consensus 94 ~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPg---------------------------------- 139 (236)
T KOG4022|consen 94 VKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPG---------------------------------- 139 (236)
T ss_pred hhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCc----------------------------------
Confidence 3455667777777777777777778888876655555444 44443
Q ss_pred CccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCCCC
Q psy16223 89 RAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMGNV 149 (153)
Q Consensus 89 ~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~ 149 (153)
+..|+.+|+++..++++|+.+-..- +. |-.+.+|.|=..||||.+.+.++
T Consensus 140 ---------MIGYGMAKaAVHqLt~SLaak~SGl-P~-gsaa~~ilPVTLDTPMNRKwMP~ 189 (236)
T KOG4022|consen 140 ---------MIGYGMAKAAVHQLTSSLAAKDSGL-PD-GSAALTILPVTLDTPMNRKWMPN 189 (236)
T ss_pred ---------ccchhHHHHHHHHHHHHhcccccCC-CC-CceeEEEeeeeccCccccccCCC
Confidence 6899999999999999999876543 11 68899999999999999988664
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00012 Score=58.46 Aligned_cols=116 Identities=21% Similarity=0.155 Sum_probs=71.8
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||.... .+.+..++++|+.|++.+++.+.+.+. .++||++||..+...+... ..+ ...+.|+.+....
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~-~~~iv~~SS~~~~~~~~~~--~~~---~~~~~E~~~~~p~ 155 (325)
T PLN02989 82 FHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSS-VKRVILTSSMAAVLAPETK--LGP---NDVVDETFFTNPS 155 (325)
T ss_pred EEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCC-ceEEEEecchhheecCCcc--CCC---CCccCcCCCCchh
Confidence 578886422 256789999999999999999887653 3699999997653211000 000 0001111000000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
. . ......|+.||.+.+.+++.++++. |+.++.+.|+.+..+...
T Consensus 156 ~-----~----------~~~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilR~~~vyGp~~~ 200 (325)
T PLN02989 156 F-----A----------EERKQWYVLSKTLAEDAAWRFAKDN-------EIDLIVLNPGLVTGPILQ 200 (325)
T ss_pred H-----h----------cccccchHHHHHHHHHHHHHHHHHc-------CCeEEEEcCCceeCCCCC
Confidence 0 0 0012469999999999888876654 688999999988777543
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00025 Score=59.51 Aligned_cols=67 Identities=19% Similarity=0.106 Sum_probs=55.8
Q ss_pred hhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCccccCCCCCch
Q psy16223 21 YLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSA 100 (153)
Q Consensus 21 ~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (153)
+.+.+.+++..++.|.++|+||+++|...... ...
T Consensus 99 l~~~~~~~~~~l~~l~~~griv~i~s~~~~~~---------------------------------------------~~~ 133 (450)
T PRK08261 99 LKALYEFFHPVLRSLAPCGRVVVLGRPPEAAA---------------------------------------------DPA 133 (450)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEccccccCC---------------------------------------------chH
Confidence 44566788888999988999999998765311 246
Q ss_pred hHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCc
Q psy16223 101 YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGY 137 (153)
Q Consensus 101 Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~ 137 (153)
|+++|+++..++|+++.|+ .. |++++.|.|+.
T Consensus 134 ~~~akaal~gl~rsla~E~-~~----gi~v~~i~~~~ 165 (450)
T PRK08261 134 AAAAQRALEGFTRSLGKEL-RR----GATAQLVYVAP 165 (450)
T ss_pred HHHHHHHHHHHHHHHHHHh-hc----CCEEEEEecCC
Confidence 9999999999999999999 66 89999999986
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00042 Score=56.06 Aligned_cols=103 Identities=16% Similarity=0.057 Sum_probs=64.8
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhc------C-CccEEEecCCcccccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLR------R-HARVVNLSSSAGHLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~------~-~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~ 70 (153)
||+||.... .+.++.++++|+.|++.+++.+.+.|. + ..++|++||....+...... ..+.
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~--------~~~~- 149 (355)
T PRK10217 79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTD--------DFFT- 149 (355)
T ss_pred EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCC--------CCcC-
Confidence 577876532 246789999999999999999987542 1 24899999865322100000 0000
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCccc
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVA 139 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~ 139 (153)
.... ..+...|+.||.+.+.+++.++++. ++.+..+.|+.+-
T Consensus 150 ------------------E~~~--~~p~s~Y~~sK~~~e~~~~~~~~~~-------~~~~~i~r~~~v~ 191 (355)
T PRK10217 150 ------------------ETTP--YAPSSPYSASKASSDHLVRAWLRTY-------GLPTLITNCSNNY 191 (355)
T ss_pred ------------------CCCC--CCCCChhHHHHHHHHHHHHHHHHHh-------CCCeEEEeeeeee
Confidence 0001 1124689999999999999987765 4555556665543
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00032 Score=56.53 Aligned_cols=105 Identities=19% Similarity=0.073 Sum_probs=66.4
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCc---cEEEecCCcccccccccHHHHhhhhccccChHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHA---RVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLT 74 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g---~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (153)
||+|+.... .+..+..+++|+.|+..+++.+.+...+.+ ++|++||....+.... + ..|
T Consensus 88 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-----~------~~E---- 152 (340)
T PLN02653 88 YNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-----P------QSE---- 152 (340)
T ss_pred EECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-----C------CCC----
Confidence 578876432 245678889999999999999988876544 6788887543322110 0 000
Q ss_pred HHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc
Q psy16223 75 DMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV 138 (153)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v 138 (153)
+.+. .+...|+.||.+.+.+++.++.++.-. -..++.++.+.||..
T Consensus 153 ---------------~~~~--~p~~~Y~~sK~~~e~~~~~~~~~~~~~-~~~~~~~~~~gp~~~ 198 (340)
T PLN02653 153 ---------------TTPF--HPRSPYAVAKVAAHWYTVNYREAYGLF-ACNGILFNHESPRRG 198 (340)
T ss_pred ---------------CCCC--CCCChhHHHHHHHHHHHHHHHHHcCCe-EEEeeeccccCCCCC
Confidence 0011 124689999999999999998776421 001455566677643
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0006 Score=55.23 Aligned_cols=114 Identities=17% Similarity=0.102 Sum_probs=68.9
Q ss_pred CCCCCCCccH--HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccc-cccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA--IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHL-SQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~--~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+|+..+.. +.++..+++|+.|+..+++.+.+... -.+||++||..... ..... +.+ .+..+...
T Consensus 82 iH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~-~~r~v~~SS~~~~~~~~~~~----~~~-----~E~~~~~~- 150 (351)
T PLN02650 82 FHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKT-VRRIVFTSSAGTVNVEEHQK----PVY-----DEDCWSDL- 150 (351)
T ss_pred EEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCC-ceEEEEecchhhcccCCCCC----Ccc-----CcccCCch-
Confidence 3566654322 33467899999999999999876431 25899999975421 11000 000 11000000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
.+. .....+...|+.||.+.+.+++.++.+. |++++.+.|+.|..+..
T Consensus 151 -~~~----------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilRp~~v~Gp~~ 198 (351)
T PLN02650 151 -DFC----------RRKKMTGWMYFVSKTLAEKAAWKYAAEN-------GLDFISIIPTLVVGPFI 198 (351)
T ss_pred -hhh----------hccccccchHHHHHHHHHHHHHHHHHHc-------CCeEEEECCCceECCCC
Confidence 000 0000112479999999999998887663 79999999999888753
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00059 Score=56.83 Aligned_cols=78 Identities=17% Similarity=0.060 Sum_probs=63.8
Q ss_pred HHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHH
Q psy16223 25 VRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAV 103 (153)
Q Consensus 25 ~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 103 (153)
+.=++...+.|..++++|-+|.... ..+|. ++ ...-+.
T Consensus 204 Wi~al~~a~lla~g~~~va~TY~G~~~t~p~----------------------------------------Y~-~g~mG~ 242 (398)
T PRK13656 204 WIDALDEAGVLAEGAKTVAYSYIGPELTHPI----------------------------------------YW-DGTIGK 242 (398)
T ss_pred HHHHHHhcccccCCcEEEEEecCCcceeecc----------------------------------------cC-CchHHH
Confidence 3346677788888999999999777 54433 11 236689
Q ss_pred hHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 104 SKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 104 sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
+|++++.-+|.|+.++.+. ||++|++.+|.+.|..+...+
T Consensus 243 AKa~LE~~~r~La~~L~~~----giran~i~~g~~~T~Ass~Ip 282 (398)
T PRK13656 243 AKKDLDRTALALNEKLAAK----GGDAYVSVLKAVVTQASSAIP 282 (398)
T ss_pred HHHHHHHHHHHHHHHhhhc----CCEEEEEecCcccchhhhcCC
Confidence 9999999999999999988 999999999999999887765
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00073 Score=53.72 Aligned_cols=104 Identities=13% Similarity=-0.008 Sum_probs=65.5
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccc-cccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 12 QAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQ-ITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 12 ~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
.+++++++|+.|++.+++++.+.+. -++||++||..+..+. ..... ...+.|..+.... + ..+
T Consensus 95 ~~~~~~~~nv~gt~~ll~aa~~~~~-v~riV~~SS~~a~~~~~~~~~~------~~~~~E~~~~~~~--~---~~~---- 158 (297)
T PLN02583 95 YDEKMVDVEVRAAHNVLEACAQTDT-IEKVVFTSSLTAVIWRDDNIST------QKDVDERSWSDQN--F---CRK---- 158 (297)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEecchHheecccccCCC------CCCCCcccCCCHH--H---Hhh----
Confidence 3678999999999999999987653 2699999998663211 00000 0001111110000 0 000
Q ss_pred cccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 91 HVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 91 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....|+.||...+.+.+.++++ . |+.++.|.|+.|..+...
T Consensus 159 ------~~~~Y~~sK~~aE~~~~~~~~~---~----gi~~v~lrp~~v~Gp~~~ 199 (297)
T PLN02583 159 ------FKLWHALAKTLSEKTAWALAMD---R----GVNMVSINAGLLMGPSLT 199 (297)
T ss_pred ------cccHHHHHHHHHHHHHHHHHHH---h----CCcEEEEcCCcccCCCCC
Confidence 0136999999999888777654 2 699999999999887643
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00057 Score=54.62 Aligned_cols=116 Identities=20% Similarity=0.181 Sum_probs=68.4
Q ss_pred CCCCCCCcc--HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHH
Q psy16223 1 MNRASTVPF--AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 1 innag~~~~--~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
||+|+.... .+....++++|+.|+..+++.+.... .-.|||++||.....+...+ .. ......++.+....
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~v~rvV~~SS~~~~~~~~~~--~~---~~~~~~E~~~~~p~- 154 (322)
T PLN02986 82 FHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETP-SVKRVILTSSTAAVLFRQPP--IE---ANDVVDETFFSDPS- 154 (322)
T ss_pred EEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcC-CccEEEEecchhheecCCcc--CC---CCCCcCcccCCChH-
Confidence 467776432 23456789999999999998865421 12589999997652111000 00 00001111100000
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
... .+...|+.||.+.+.+++.+.++. |+.++.+.|+.+..+...
T Consensus 155 ----~~~----------~~~~~Y~~sK~~aE~~~~~~~~~~-------~~~~~~lrp~~v~Gp~~~ 199 (322)
T PLN02986 155 ----LCR----------ETKNWYPLSKILAENAAWEFAKDN-------GIDMVVLNPGFICGPLLQ 199 (322)
T ss_pred ----Hhh----------ccccchHHHHHHHHHHHHHHHHHh-------CCeEEEEcccceeCCCCC
Confidence 000 013579999999988887776543 699999999999887643
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0014 Score=52.84 Aligned_cols=116 Identities=19% Similarity=0.131 Sum_probs=67.8
Q ss_pred CCCCCCCcc--HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHH
Q psy16223 1 MNRASTVPF--AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 1 innag~~~~--~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
||+|+.... .+.+...+++|+.|+..+++++.... ...++|++||........... ....+.|+.+...
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~~~~~------~~~~~~E~~~~~~-- 155 (338)
T PLN00198 85 FHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSINKLSG------TGLVMNEKNWTDV-- 155 (338)
T ss_pred EEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeeccCCCC------CCceeccccCCch--
Confidence 467775432 23455678999999999999976642 235899999976532110000 0000011100000
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
.+.. ....+...|+.||.+.+.+++.++.+. |+.+..+.|+.|..+-
T Consensus 156 ~~~~----------~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 156 EFLT----------SEKPPTWGYPASKTLAEKAAWKFAEEN-------NIDLITVIPTLMAGPS 202 (338)
T ss_pred hhhh----------hcCCccchhHHHHHHHHHHHHHHHHhc-------CceEEEEeCCceECCC
Confidence 0000 000123679999999999988877653 6889999998887664
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0016 Score=51.16 Aligned_cols=103 Identities=15% Similarity=0.047 Sum_probs=66.6
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+|+.... .+.++..+++|+.++..+++.+...+. +.++|++||....+...... . ..
T Consensus 78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~v~g~~~~~~---~------~~-------- 139 (317)
T TIGR01181 78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWH-EFRFHHISTDEVYGDLEKGD---A------FT-------- 139 (317)
T ss_pred EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-CceEEEeeccceeCCCCCCC---C------cC--------
Confidence 466765432 245778899999999999998776554 34799999865322110000 0 00
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
... .-.+...|+.+|.+.+.+++.++.+. ++.+..+.|+.+--+
T Consensus 140 -----------e~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~i~R~~~i~G~ 183 (317)
T TIGR01181 140 -----------ETT--PLAPSSPYSASKAASDHLVRAYHRTY-------GLPALITRCSNNYGP 183 (317)
T ss_pred -----------CCC--CCCCCCchHHHHHHHHHHHHHHHHHh-------CCCeEEEEeccccCC
Confidence 000 01123579999999999999887764 578888888876544
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0013 Score=53.21 Aligned_cols=98 Identities=17% Similarity=0.082 Sum_probs=58.3
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcC-------CccEEEecCCcccccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRR-------HARVVNLSSSAGHLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~-------~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~ 70 (153)
||+|+.... .+..+.++++|+.|++.+++.+.++|++ ..++|++||....+....+.+...--....+.|
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E 157 (352)
T PRK10084 78 MHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTE 157 (352)
T ss_pred EECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccc
Confidence 477776422 2446789999999999999999887632 247999988654321100000000000000000
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHh
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKF 119 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~ 119 (153)
.....+...|+.||.+.+.+++.+++++
T Consensus 158 ---------------------~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 185 (352)
T PRK10084 158 ---------------------TTAYAPSSPYSASKASSDHLVRAWLRTY 185 (352)
T ss_pred ---------------------cCCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence 0111234689999999999999988775
|
|
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.002 Score=51.89 Aligned_cols=84 Identities=13% Similarity=0.171 Sum_probs=67.3
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC----CccEEEecCCc-c-cccccccHHHHhhhhccccChHHHHHHHHHHHHHh
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR----HARVVNLSSSA-G-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDIT 84 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~----~g~iv~~sS~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (153)
+.|.+.+++|++-++.+++.++|.|+. ..+||.+.... . ...|.
T Consensus 115 s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~~Pf------------------------------ 164 (299)
T PF08643_consen 115 SSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLNPPF------------------------------ 164 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccCCCc------------------------------
Confidence 789999999999999999999999976 46776665433 3 32222
Q ss_pred hcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 85 KEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 85 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
...-.....++..++..|++|+... ||.|..++-|-++-.
T Consensus 165 -------------hspE~~~~~al~~~~~~LrrEl~~~----~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 165 -------------HSPESIVSSALSSFFTSLRRELRPH----NIDVTQIKLGNLDIG 204 (299)
T ss_pred -------------cCHHHHHHHHHHHHHHHHHHHhhhc----CCceEEEEeeeeccc
Confidence 2455677789999999999999977 899999999977655
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0029 Score=51.34 Aligned_cols=109 Identities=17% Similarity=0.045 Sum_probs=67.0
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYE 79 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (153)
||+|+... ++++..+++|+.|+..+++++... .-.++|++||..+ .+.+...+. ..+.|+.+...
T Consensus 86 ih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~--~v~r~V~~SS~~avyg~~~~~~~-------~~~~E~~~~~~--- 151 (342)
T PLN02214 86 FHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA--KVKRVVITSSIGAVYMDPNRDPE-------AVVDESCWSDL--- 151 (342)
T ss_pred EEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeccceeeeccCCCCCC-------cccCcccCCCh---
Confidence 46676542 356788999999999999987653 1248999999754 322110000 00111100000
Q ss_pred HHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 80 FMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
.....+...|+.||.+.+.+++..+++. |+.+..+.|+.|--+-
T Consensus 152 ------------~~~~~p~~~Y~~sK~~aE~~~~~~~~~~-------g~~~v~lRp~~vyGp~ 195 (342)
T PLN02214 152 ------------DFCKNTKNWYCYGKMVAEQAAWETAKEK-------GVDLVVLNPVLVLGPP 195 (342)
T ss_pred ------------hhccccccHHHHHHHHHHHHHHHHHHHc-------CCcEEEEeCCceECCC
Confidence 0000123579999999999888776654 6889999999886653
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0032 Score=50.84 Aligned_cols=88 Identities=19% Similarity=0.133 Sum_probs=55.6
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhh-hcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPL-LRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDM 76 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~-l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (153)
||+|+.... .+.....+++|+.|+..+++.+.+. +++..++|++||....+..... ...
T Consensus 83 iH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~----------~~~------- 145 (343)
T TIGR01472 83 YNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEI----------PQN------- 145 (343)
T ss_pred EECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCC----------CCC-------
Confidence 467765422 2334677889999999999988763 3333589999986543321100 000
Q ss_pred HHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHh
Q psy16223 77 MYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKF 119 (153)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~ 119 (153)
..... .+...|+.||.+.+.+++.+++++
T Consensus 146 ------------E~~~~--~p~~~Y~~sK~~~e~~~~~~~~~~ 174 (343)
T TIGR01472 146 ------------ETTPF--YPRSPYAAAKLYAHWITVNYREAY 174 (343)
T ss_pred ------------CCCCC--CCCChhHHHHHHHHHHHHHHHHHh
Confidence 00011 124689999999999999988775
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0031 Score=50.45 Aligned_cols=104 Identities=19% Similarity=0.129 Sum_probs=64.4
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
||||+.......++..+++|+.|+..+++..... ...+++++||..........+ . .+.
T Consensus 93 ih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~--~~~~~v~iSS~~v~~~~~~~~-----~-----~~~--------- 151 (367)
T TIGR01746 93 VHNGALVNWVYPYSELRAANVLGTREVLRLAASG--RAKPLHYVSTISVLAAIDLST-----V-----TED--------- 151 (367)
T ss_pred EeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC--CCceEEEEccccccCCcCCCC-----c-----ccc---------
Confidence 4677765544557778899999999988876542 123599999987632110000 0 000
Q ss_pred HHHhhcCCCcccc-CCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 81 MDITKEHPRAHVA-KGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
..... .......|+.+|.+.+.+.+..+. . |++++.+.||.+..+
T Consensus 152 --------~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~----g~~~~i~Rpg~v~G~ 197 (367)
T TIGR01746 152 --------DAIVTPPPGLAGGYAQSKWVAELLVREASD----R----GLPVTIVRPGRILGN 197 (367)
T ss_pred --------ccccccccccCCChHHHHHHHHHHHHHHHh----c----CCCEEEECCCceeec
Confidence 00000 000135799999999888765433 3 699999999998875
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0023 Score=49.64 Aligned_cols=107 Identities=19% Similarity=0.122 Sum_probs=57.2
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCccccccc-cc-HHHHhhhhccccChHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQI-TN-LELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
||+|+...+....+...++|+.|+..+.+.+...-. .+++++||........ .. +.... ....
T Consensus 92 iH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~--~~~~~iSTa~v~~~~~~~~~~~~~~-~~~~------------ 156 (249)
T PF07993_consen 92 IHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKR--KRFHYISTAYVAGSRPGTIEEKVYP-EEED------------ 156 (249)
T ss_dssp EE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS-----EEEEEEGGGTTS-TTT--SSS-H-HH--------------
T ss_pred eecchhhhhcccchhhhhhHHHHHHHHHHHHHhccC--cceEEeccccccCCCCCcccccccc-cccc------------
Confidence 477777777777888999999999999998763222 3999999932222111 00 00000 0000
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccC
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVAT 140 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T 140 (153)
.......+ ...|..||..-+.+.+..+.+. |+.+..+.||.|-.
T Consensus 157 ----------~~~~~~~~-~~gY~~SK~~aE~~l~~a~~~~-------g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 157 ----------DLDPPQGF-PNGYEQSKWVAERLLREAAQRH-------GLPVTIYRPGIIVG 200 (249)
T ss_dssp ----------EEE--TTS-EE-HHHHHHHHHHHHHHHHHHH----------EEEEEE-EEE-
T ss_pred ----------cchhhccC-CccHHHHHHHHHHHHHHHHhcC-------CceEEEEecCcccc
Confidence 11111122 3589999999999988877653 68899999998765
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0072 Score=48.00 Aligned_cols=115 Identities=17% Similarity=0.061 Sum_probs=65.8
Q ss_pred CCCCCCCcc--HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHH
Q psy16223 1 MNRASTVPF--AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 1 innag~~~~--~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
||+|+.... .+..+.++++|+.|+..+++.+..... -.++|++||.....+...+. .+ .....|+......
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~--~~---~~~~~E~~~~~p~- 153 (322)
T PLN02662 81 FHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPL--TP---DVVVDETWFSDPA- 153 (322)
T ss_pred EEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCC--CC---CCcCCcccCCChh-
Confidence 466665422 123357899999999999998765322 24899999965321110000 00 0000110000000
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
... -....|+.+|.+.+.+++.+.++. |+.+..+.|+.+..+..
T Consensus 154 ----~~~----------~~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~lRp~~v~Gp~~ 197 (322)
T PLN02662 154 ----FCE----------ESKLWYVLSKTLAEEAAWKFAKEN-------GIDMVTINPAMVIGPLL 197 (322)
T ss_pred ----Hhh----------cccchHHHHHHHHHHHHHHHHHHc-------CCcEEEEeCCcccCCCC
Confidence 000 002469999999988887766543 68999999999888754
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.014 Score=45.11 Aligned_cols=32 Identities=16% Similarity=-0.008 Sum_probs=23.5
Q ss_pred HHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc
Q psy16223 16 TILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG 49 (153)
Q Consensus 16 ~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~ 49 (153)
.+++|+.++..+++.+.. ...++||++||...
T Consensus 104 ~~~~n~~~~~~ll~a~~~--~~~~~iV~iSS~~v 135 (251)
T PLN00141 104 PWKVDNFGTVNLVEACRK--AGVTRFILVSSILV 135 (251)
T ss_pred ceeeehHHHHHHHHHHHH--cCCCEEEEEccccc
Confidence 457888898888888632 22368999999764
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.028 Score=47.47 Aligned_cols=105 Identities=13% Similarity=0.034 Sum_probs=60.4
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCcc
Q psy16223 12 QAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAH 91 (153)
Q Consensus 12 ~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
.++..+++|+.|++.+++.+... ....++|++||....+.+..+ +.+..+.+.+. ..+ +..
T Consensus 158 ~~~~~~~~Nv~gt~nlleaa~~~-gv~~~~V~~SS~~vYG~~~~~------~~E~~i~~~~~--~~e----------~~~ 218 (442)
T PLN02572 158 RAVFTQHNNVIGTLNVLFAIKEF-APDCHLVKLGTMGEYGTPNID------IEEGYITITHN--GRT----------DTL 218 (442)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh-CCCccEEEEecceecCCCCCC------Ccccccccccc--ccc----------ccc
Confidence 35677899999999999887543 112489999997644321100 00000000000 000 000
Q ss_pred ccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 92 VAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 92 ~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
.....+...|+.||.+.+.+++..+..+ |+.+..+.|+.+--+.
T Consensus 219 ~~~~~P~s~Yg~SK~a~E~l~~~~~~~~-------gl~~v~lR~~~vyGp~ 262 (442)
T PLN02572 219 PYPKQASSFYHLSKVHDSHNIAFTCKAW-------GIRATDLNQGVVYGVR 262 (442)
T ss_pred cCCCCCCCcchhHHHHHHHHHHHHHHhc-------CCCEEEEecccccCCC
Confidence 0011123679999999998888776654 6888888888775553
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.022 Score=44.92 Aligned_cols=46 Identities=15% Similarity=0.081 Sum_probs=33.0
Q ss_pred CCCCCCCcc-HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc
Q psy16223 1 MNRASTVPF-AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG 49 (153)
Q Consensus 1 innag~~~~-~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~ 49 (153)
||+|+.... .++.+..+++|+.++..+++.+.. .+.++|++||...
T Consensus 71 vh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~---~~~~~v~~SS~~v 117 (314)
T TIGR02197 71 FHQGACSDTTETDGEYMMENNYQYSKRLLDWCAE---KGIPFIYASSAAT 117 (314)
T ss_pred EECccccCccccchHHHHHHHHHHHHHHHHHHHH---hCCcEEEEccHHh
Confidence 466765422 245678899999999999988654 2458999999654
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.021 Score=44.91 Aligned_cols=102 Identities=16% Similarity=-0.018 Sum_probs=62.5
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... +.....+++|+.++..+++.+... .-.++|++||....+..... ...+
T Consensus 75 v~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~ss~~~~g~~~~~----------~~~e------- 135 (328)
T TIGR01179 75 IHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT--GVKKFIFSSSAAVYGEPSSI----------PISE------- 135 (328)
T ss_pred EECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc--CCCEEEEecchhhcCCCCCC----------Cccc-------
Confidence 4677764322 345678899999999998875432 12589998885433211100 0000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
.... .+...|+.+|.+++.+++.++++. . ++.+..+-|+.+-.+
T Consensus 136 ------------~~~~--~~~~~y~~sK~~~e~~~~~~~~~~--~----~~~~~ilR~~~v~g~ 179 (328)
T TIGR01179 136 ------------DSPL--GPINPYGRSKLMSERILRDLSKAD--P----GLSYVILRYFNVAGA 179 (328)
T ss_pred ------------cCCC--CCCCchHHHHHHHHHHHHHHHHhc--c----CCCEEEEecCcccCC
Confidence 0000 123679999999999999887652 2 577888888655443
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.026 Score=45.12 Aligned_cols=87 Identities=20% Similarity=0.054 Sum_probs=52.8
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||.... .+.....+++|+.++..+++.+... .-.++|++||....+.... ..+.|.
T Consensus 78 vh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~yg~~~~----------~~~~E~------ 139 (338)
T PRK10675 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA--NVKNLIFSSSATVYGDQPK----------IPYVES------ 139 (338)
T ss_pred EECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhhCCCCC----------Cccccc------
Confidence 467765432 2345678999999999988765432 2258999998653321100 000000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHh
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKF 119 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~ 119 (153)
.. .+.+...|+.+|.+.+.+++.++++.
T Consensus 140 -------------~~-~~~p~~~Y~~sK~~~E~~~~~~~~~~ 167 (338)
T PRK10675 140 -------------FP-TGTPQSPYGKSKLMVEQILTDLQKAQ 167 (338)
T ss_pred -------------cC-CCCCCChhHHHHHHHHHHHHHHHHhc
Confidence 00 01124789999999999999987654
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.025 Score=45.73 Aligned_cols=80 Identities=20% Similarity=0.166 Sum_probs=53.4
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
++.+..+++|++|++.++.++..+... -|++.+|.=--.+.-... .+. -+
T Consensus 92 ~~P~~Fi~TNv~GT~~LLEaar~~~~~-frf~HISTDEVYG~l~~~--------~~~---------------------Ft 141 (340)
T COG1088 92 DGPAPFIQTNVVGTYTLLEAARKYWGK-FRFHHISTDEVYGDLGLD--------DDA---------------------FT 141 (340)
T ss_pred cChhhhhhcchHHHHHHHHHHHHhccc-ceEEEeccccccccccCC--------CCC---------------------cc
Confidence 345667899999999999998777654 478888764322211000 000 11
Q ss_pred cccCCCCCchhHHhHHHHHHHHHHHHHHhc
Q psy16223 91 HVAKGWPDSAYAVSKIGVNLLTRIYQKKFD 120 (153)
Q Consensus 91 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~ 120 (153)
...+..+.+.|++||++-.++.|+..+-+.
T Consensus 142 E~tp~~PsSPYSASKAasD~lVray~~TYg 171 (340)
T COG1088 142 ETTPYNPSSPYSASKAASDLLVRAYVRTYG 171 (340)
T ss_pred cCCCCCCCCCcchhhhhHHHHHHHHHHHcC
Confidence 223344568999999999999999988874
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.028 Score=44.67 Aligned_cols=112 Identities=17% Similarity=0.023 Sum_probs=66.3
Q ss_pred CCCCCCCccH--HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHH
Q psy16223 1 MNRASTVPFA--IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 1 innag~~~~~--~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
||.|++.+.. ...+..+++|+.|+-.+.+..... .=.++|++||........... +....+
T Consensus 71 ~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~--~VkrlVytSS~~vv~~~~~~~---~~~~~d------------ 133 (280)
T PF01073_consen 71 FHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA--GVKRLVYTSSISVVFDNYKGD---PIINGD------------ 133 (280)
T ss_pred EEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcCcceeEeccCCC---CcccCC------------
Confidence 3566655333 457889999999999999876542 125899999988732200000 000000
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHH-HhccccCCCCeEEEEeeCCcccCCC
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQK-KFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~-e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
....++......|+.||+.-+.+...... ++. . +. .+...+|.|..|-=+-
T Consensus 134 ----------E~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~-~-g~-~l~t~~lRP~~IyGp~ 185 (280)
T PF01073_consen 134 ----------EDTPYPSSPLDPYAESKALAEKAVLEANGSELK-N-GG-RLRTCALRPAGIYGPG 185 (280)
T ss_pred ----------cCCcccccccCchHHHHHHHHHHHHhhcccccc-c-cc-ceeEEEEeccEEeCcc
Confidence 01111111246899999999887765443 221 1 11 3888999998875553
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.039 Score=43.64 Aligned_cols=94 Identities=16% Similarity=-0.060 Sum_probs=59.4
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
+.++..+++|+.++..+++.+... .-.++|++||....+..... ....|+
T Consensus 80 ~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~---------~~~~e~------------------- 129 (328)
T TIGR03466 80 PDPEEMYAANVEGTRNLLRAALEA--GVERVVYTSSVATLGVRGDG---------TPADET------------------- 129 (328)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEechhhcCcCCCC---------CCcCcc-------------------
Confidence 446788999999999998886542 12589999997653211000 000000
Q ss_pred cccCCC-CCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 91 HVAKGW-PDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 91 ~~~~~~-~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
...... ....|+.+|.+.+.+.+.+..+. |+.+..+.|+.+-.+
T Consensus 130 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~ilR~~~~~G~ 174 (328)
T TIGR03466 130 TPSSLDDMIGHYKRSKFLAEQAALEMAAEK-------GLPVVIVNPSTPIGP 174 (328)
T ss_pred CCCCcccccChHHHHHHHHHHHHHHHHHhc-------CCCEEEEeCCccCCC
Confidence 000000 02479999999999988876653 688889999876443
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.066 Score=43.42 Aligned_cols=89 Identities=16% Similarity=0.037 Sum_probs=57.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCccccc-ccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 12 QAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLS-QITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 12 ~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
.....+++|+.|+..+.+.+... .-.++|++||....+. +..+ ..
T Consensus 109 ~~~~~~~~Nv~gt~nll~~~~~~--~~~~~v~~SS~~vyg~~~~~~-----------~~--------------------- 154 (348)
T PRK15181 109 DPIATNSANIDGFLNMLTAARDA--HVSSFTYAASSSTYGDHPDLP-----------KI--------------------- 154 (348)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeechHhhCCCCCCC-----------CC---------------------
Confidence 34567999999999999876432 1248999998643321 1000 00
Q ss_pred cccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 91 HVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 91 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
......+...|+.||...+.+++..+.+. |+.+..+.|+.+--+
T Consensus 155 e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~~lR~~~vyGp 198 (348)
T PRK15181 155 EERIGRPLSPYAVTKYVNELYADVFARSY-------EFNAIGLRYFNVFGR 198 (348)
T ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHh-------CCCEEEEEecceeCc
Confidence 00112234689999999998887765543 688888888876554
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.06 Score=43.62 Aligned_cols=103 Identities=19% Similarity=0.039 Sum_probs=57.9
Q ss_pred HHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCccccC
Q psy16223 15 KTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAK 94 (153)
Q Consensus 15 ~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (153)
.++++|+.|+..+++.+.+.. ..+++|++||....+......... ..+.|+.....-+ ..+ ..
T Consensus 108 n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~-----~~~~E~~~~p~~~-----~~~-----~~- 170 (353)
T PLN02896 108 KVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKDSNGRWR-----AVVDETCQTPIDH-----VWN-----TK- 170 (353)
T ss_pred HhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccccCCCCC-----CccCcccCCcHHH-----hhc-----cC-
Confidence 456677799999998876643 135899999976532110000000 0011110000000 000 00
Q ss_pred CCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 95 GWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 95 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
-....|+.||.+.+.+++.++++. |+.+..+.|+.|-.+.
T Consensus 171 -~~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~lR~~~vyGp~ 210 (353)
T PLN02896 171 -ASGWVYVLSKLLTEEAAFKYAKEN-------GIDLVSVITTTVAGPF 210 (353)
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHc-------CCeEEEEcCCcccCCC
Confidence 012579999999999888776654 6899999998776664
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.078 Score=42.63 Aligned_cols=85 Identities=12% Similarity=0.013 Sum_probs=52.1
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+|+.... .+.++..+++|+.++..+++++... .-.++|++||....+.... ..+.|
T Consensus 86 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~----------~~~~E------- 146 (352)
T PLN02240 86 IHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH--GCKKLVFSSSATVYGQPEE----------VPCTE------- 146 (352)
T ss_pred EEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccHHHhCCCCC----------CCCCC-------
Confidence 466765432 2457789999999999998865321 1258999998543321100 00000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHH
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKK 118 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e 118 (153)
+.... +...|+.||.+.+.+++.++.+
T Consensus 147 ------------~~~~~--~~~~Y~~sK~~~e~~~~~~~~~ 173 (352)
T PLN02240 147 ------------EFPLS--ATNPYGRTKLFIEEICRDIHAS 173 (352)
T ss_pred ------------CCCCC--CCCHHHHHHHHHHHHHHHHHHh
Confidence 00111 2368999999999999988754
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.085 Score=41.72 Aligned_cols=87 Identities=16% Similarity=0.042 Sum_probs=54.1
Q ss_pred HHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCcccc
Q psy16223 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVA 93 (153)
Q Consensus 14 ~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (153)
+..+++|+.++..+.+.+.. .+.++|++||....+.+... ...+ ..
T Consensus 87 ~~~~~~n~~~t~~ll~~~~~---~~~~~i~~SS~~vyg~~~~~----------~~~E---------------------~~ 132 (308)
T PRK11150 87 KYMMDNNYQYSKELLHYCLE---REIPFLYASSAATYGGRTDD----------FIEE---------------------RE 132 (308)
T ss_pred HHHHHHHHHHHHHHHHHHHH---cCCcEEEEcchHHhCcCCCC----------CCcc---------------------CC
Confidence 45789999999999888754 24579999987543211000 0000 00
Q ss_pred CCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 94 KGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 94 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
...+...|+.+|.+.+.+++..+.+. ++.+..+.|+.+--+
T Consensus 133 ~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~lR~~~vyG~ 173 (308)
T PRK11150 133 YEKPLNVYGYSKFLFDEYVRQILPEA-------NSQICGFRYFNVYGP 173 (308)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHc-------CCCEEEEeeeeecCC
Confidence 01123679999999998888765442 567777777665443
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.064 Score=39.63 Aligned_cols=74 Identities=18% Similarity=0.056 Sum_probs=54.9
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPR 89 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
+.++.++...+.|...+.+.+.+ .+-..+|.+||..+ .+.++
T Consensus 103 ~~~~~~~~~Kv~g~~~L~~~~~~--~~l~~~i~~SSis~~~G~~g----------------------------------- 145 (181)
T PF08659_consen 103 DEFDAVLAPKVRGLWNLHEALEN--RPLDFFILFSSISSLLGGPG----------------------------------- 145 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT--TTTSEEEEEEEHHHHTT-TT-----------------------------------
T ss_pred HHHHHHHhhhhhHHHHHHHHhhc--CCCCeEEEECChhHhccCcc-----------------------------------
Confidence 78999999999999999888766 33357899999887 55443
Q ss_pred ccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCc
Q psy16223 90 AHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGY 137 (153)
Q Consensus 90 ~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~ 137 (153)
...|+++...+..+++..+. . |..+.+|+-|.
T Consensus 146 --------q~~YaaAN~~lda~a~~~~~----~----g~~~~sI~wg~ 177 (181)
T PF08659_consen 146 --------QSAYAAANAFLDALARQRRS----R----GLPAVSINWGA 177 (181)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHH----T----TSEEEEEEE-E
T ss_pred --------hHhHHHHHHHHHHHHHHHHh----C----CCCEEEEEccc
Confidence 57899998888888776544 2 56677776664
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.17 Score=39.55 Aligned_cols=90 Identities=20% Similarity=0.108 Sum_probs=55.8
Q ss_pred HHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCcccc
Q psy16223 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVA 93 (153)
Q Consensus 14 ~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (153)
...+++|+.|+..+.+++.. ..-.++|+.||........... ...|+ . .
T Consensus 86 ~~~~~~nv~gt~~ll~aa~~--~~~~~~v~~ss~~~~~~~~~~~---------~~~E~-------------------~-~ 134 (314)
T COG0451 86 AEFLDVNVDGTLNLLEAARA--AGVKRFVFASSVSVVYGDPPPL---------PIDED-------------------L-G 134 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCCCceECCCCCCC---------Ccccc-------------------c-C
Confidence 45899999999999988766 3336788855544332110000 00000 0 0
Q ss_pred CCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 94 KGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 94 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
...+...|+.+|.+.+.+++.... .. |+.+..+-|+.+-=+
T Consensus 135 ~~~p~~~Yg~sK~~~E~~~~~~~~---~~----~~~~~ilR~~~vyGp 175 (314)
T COG0451 135 PPRPLNPYGVSKLAAEQLLRAYAR---LY----GLPVVILRPFNVYGP 175 (314)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH---Hh----CCCeEEEeeeeeeCC
Confidence 111223799999999999998887 33 688888888765433
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.2 Score=44.43 Aligned_cols=107 Identities=10% Similarity=-0.028 Sum_probs=62.3
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||.|+.... ....+..+++|+.++..+.+++... +.++|++||....+..... .+.|+....
T Consensus 387 iHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~---~~~~V~~SS~~vyg~~~~~----------~~~E~~~~~-- 451 (660)
T PRK08125 387 LPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY---NKRIIFPSTSEVYGMCTDK----------YFDEDTSNL-- 451 (660)
T ss_pred EECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc---CCeEEEEcchhhcCCCCCC----------CcCcccccc--
Confidence 355554322 1234568899999999988887643 3589999996543211000 001100000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
.......+.+.|+.||.+.+.+++..+++. |+.+..+.|+.+.-+
T Consensus 452 ------------~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~-------g~~~~ilR~~~vyGp 496 (660)
T PRK08125 452 ------------IVGPINKQRWIYSVSKQLLDRVIWAYGEKE-------GLRFTLFRPFNWMGP 496 (660)
T ss_pred ------------ccCCCCCCccchHHHHHHHHHHHHHHHHhc-------CCceEEEEEceeeCC
Confidence 000001123579999999999998876654 577777888766543
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.22 Score=40.73 Aligned_cols=116 Identities=22% Similarity=0.120 Sum_probs=65.3
Q ss_pred CCCCCCccH-HHHH-HHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHH
Q psy16223 2 NRASTVPFA-IQAE-KTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYE 79 (153)
Q Consensus 2 nnag~~~~~-~~~~-~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (153)
|.|.+..+. ++.+ +.++..+.|+..+.+.+...= .=-|||++||.++..++....+ ..+.+.|..|.+.-.
T Consensus 84 H~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv~~~~~~~~-----~~~vvdE~~wsd~~~- 156 (327)
T KOG1502|consen 84 HTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAVRYNGPNIG-----ENSVVDEESWSDLDF- 156 (327)
T ss_pred EeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHhccCCcCCC-----CCcccccccCCcHHH-
Confidence 455555443 2234 789999999999888765432 1158999999988433311110 111122222222110
Q ss_pred HHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 80 FMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
... ....|..||..-+-.+...+.|- |+.+..|+||.|--|....
T Consensus 157 -~~~-------------~~~~Y~~sK~lAEkaAw~fa~e~-------~~~lv~inP~lV~GP~l~~ 201 (327)
T KOG1502|consen 157 -CRC-------------KKLWYALSKTLAEKAAWEFAKEN-------GLDLVTINPGLVFGPGLQP 201 (327)
T ss_pred -HHh-------------hHHHHHHHHHHHHHHHHHHHHhC-------CccEEEecCCceECCCccc
Confidence 000 01357788866554444444432 6999999999988777665
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.28 Score=38.44 Aligned_cols=106 Identities=14% Similarity=0.013 Sum_probs=61.0
Q ss_pred CCCCCCCcc----HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHH
Q psy16223 1 MNRASTVPF----AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDM 76 (153)
Q Consensus 1 innag~~~~----~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (153)
||+|+.... .+..+..+++|+.++..+++.+... .-.++|++||..-.+... .....|+.+.
T Consensus 54 ih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~i~~SS~~vyg~~~----------~~~~~E~~~~-- 119 (306)
T PLN02725 54 ILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH--GVKKLLFLGSSCIYPKFA----------PQPIPETALL-- 119 (306)
T ss_pred EEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc--CCCeEEEeCceeecCCCC----------CCCCCHHHhc--
Confidence 466665321 1335567899999999988887542 125899999864322100 0001111100
Q ss_pred HHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 77 MYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
+ . ..... ...|+.||.+.+.+.+.+..+. ++.+..+.|+.+--+
T Consensus 120 ---------~--~--~~~p~-~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~~~R~~~vyG~ 163 (306)
T PLN02725 120 ---------T--G--PPEPT-NEWYAIAKIAGIKMCQAYRIQY-------GWDAISGMPTNLYGP 163 (306)
T ss_pred ---------c--C--CCCCC-cchHHHHHHHHHHHHHHHHHHh-------CCCEEEEEecceeCC
Confidence 0 0 00000 1359999999998877765543 578888888876554
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.23 Score=40.72 Aligned_cols=37 Identities=16% Similarity=0.014 Sum_probs=28.8
Q ss_pred chhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 99 ~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
..|+.||.+.+.+.+..++. . |+.+..+.|+.|--+-
T Consensus 180 ~~Y~~sK~~~E~~~~~~~~~---~----g~~~~ilR~~~vyGp~ 216 (386)
T PLN02427 180 WSYACAKQLIERLIYAEGAE---N----GLEFTIVRPFNWIGPR 216 (386)
T ss_pred cchHHHHHHHHHHHHHHHhh---c----CCceEEecccceeCCC
Confidence 57999999999888765543 2 6888999998776653
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.3 Score=43.20 Aligned_cols=105 Identities=13% Similarity=0.071 Sum_probs=61.9
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||.|+..... +.....+++|+.|+..+.+.+... ..-.++|++||....+...... .... .
T Consensus 85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~vkr~I~~SS~~vyg~~~~~~----~~~~---~-------- 148 (668)
T PLN02260 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDA----DVGN---H-------- 148 (668)
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEcchHHhCCCcccc----ccCc---c--------
Confidence 4667665332 234567899999999988775331 1125899999965432111000 0000 0
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
.... -.+...|+.+|.+.+.+.+..+.+. ++.+..+.|+.|--+
T Consensus 149 -----------E~~~--~~p~~~Y~~sK~~aE~~v~~~~~~~-------~l~~vilR~~~VyGp 192 (668)
T PLN02260 149 -----------EASQ--LLPTNPYSATKAGAEMLVMAYGRSY-------GLPVITTRGNNVYGP 192 (668)
T ss_pred -----------ccCC--CCCCCCcHHHHHHHHHHHHHHHHHc-------CCCEEEECcccccCc
Confidence 0000 1123679999999999988776653 577778888766543
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=93.63 E-value=0.41 Score=38.60 Aligned_cols=95 Identities=12% Similarity=-0.085 Sum_probs=55.1
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCcc
Q psy16223 12 QAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAH 91 (153)
Q Consensus 12 ~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
+.+..+++|+.|+..+...+... +.++|++||....+... .. ...++... -..
T Consensus 87 ~p~~~~~~n~~~~~~ll~aa~~~---~~~~v~~SS~~vyg~~~-~~---------~~~ee~~~--------------~~~ 139 (347)
T PRK11908 87 QPLRVFELDFEANLPIVRSAVKY---GKHLVFPSTSEVYGMCP-DE---------EFDPEASP--------------LVY 139 (347)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeccCC-Cc---------CcCccccc--------------ccc
Confidence 45677899999999888776542 36899999975432110 00 00000000 000
Q ss_pred ccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccC
Q psy16223 92 VAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVAT 140 (153)
Q Consensus 92 ~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T 140 (153)
.+...+.+.|+.+|.+.+.+.+.++.+. |+.+..+.|+.+--
T Consensus 140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~ilR~~~v~G 181 (347)
T PRK11908 140 GPINKPRWIYACSKQLMDRVIWAYGMEE-------GLNFTLFRPFNWIG 181 (347)
T ss_pred CcCCCccchHHHHHHHHHHHHHHHHHHc-------CCCeEEEeeeeeeC
Confidence 0000123579999999998888776543 56666677765533
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.45 Score=40.84 Aligned_cols=48 Identities=19% Similarity=0.166 Sum_probs=34.6
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG 49 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~ 49 (153)
||.|+.....+..+..+++|+.|+..+.+.+... ..-.++|++||...
T Consensus 117 iH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~k~~V~vST~~v 164 (491)
T PLN02996 117 VNLAATTNFDERYDVALGINTLGALNVLNFAKKC-VKVKMLLHVSTAYV 164 (491)
T ss_pred EECccccCCcCCHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEeeeEE
Confidence 4677766555667889999999999998876442 11247899888764
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.43 Score=40.44 Aligned_cols=91 Identities=20% Similarity=0.055 Sum_probs=53.2
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCcc
Q psy16223 12 QAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAH 91 (153)
Q Consensus 12 ~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
..+..+++|+.|+..+.+.+... +.++|++||....+.... ....|+.+. .
T Consensus 202 ~p~~~~~~Nv~gt~nLleaa~~~---g~r~V~~SS~~VYg~~~~----------~p~~E~~~~----------------~ 252 (442)
T PLN02206 202 NPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQ----------HPQVETYWG----------------N 252 (442)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHh---CCEEEEECChHHhCCCCC----------CCCCccccc----------------c
Confidence 45678999999999998876432 358999998754321110 000000000 0
Q ss_pred ccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc
Q psy16223 92 VAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV 138 (153)
Q Consensus 92 ~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v 138 (153)
..+.-....|+.+|.+.+.+++...++. ++.+..+.|+.+
T Consensus 253 ~~P~~~~s~Y~~SK~~aE~~~~~y~~~~-------g~~~~ilR~~~v 292 (442)
T PLN02206 253 VNPIGVRSCYDEGKRTAETLTMDYHRGA-------NVEVRIARIFNT 292 (442)
T ss_pred CCCCCccchHHHHHHHHHHHHHHHHHHh-------CCCeEEEEeccc
Confidence 0000113679999999998887765543 466666666544
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.58 Score=36.37 Aligned_cols=96 Identities=18% Similarity=0.081 Sum_probs=56.4
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... ...+..+++|+.++..+.+.+.. .+.++|++||......... ....|+
T Consensus 55 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~v~~Ss~~vy~~~~~----------~~~~E~------ 115 (287)
T TIGR01214 55 VNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAAR---HGARLVHISTDYVFDGEGK----------RPYRED------ 115 (287)
T ss_pred EECCccccccccccCHHHHHHHHHHHHHHHHHHHHH---cCCeEEEEeeeeeecCCCC----------CCCCCC------
Confidence 4666654322 23567889999999999888643 2358999998643211000 000000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
....+...|+.+|...+.+++.+ +..+..+.|+.+-.+
T Consensus 116 ---------------~~~~~~~~Y~~~K~~~E~~~~~~-----------~~~~~ilR~~~v~G~ 153 (287)
T TIGR01214 116 ---------------DATNPLNVYGQSKLAGEQAIRAA-----------GPNALIVRTSWLYGG 153 (287)
T ss_pred ---------------CCCCCcchhhHHHHHHHHHHHHh-----------CCCeEEEEeeecccC
Confidence 00112367999999988777653 245567777776544
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.6 Score=39.47 Aligned_cols=91 Identities=19% Similarity=0.056 Sum_probs=53.5
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCcc
Q psy16223 12 QAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAH 91 (153)
Q Consensus 12 ~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
+.+..+++|+.|+..+...+... +.++|++||....+.+.. ....|+.+..
T Consensus 203 ~p~~~~~~Nv~gT~nLleaa~~~---g~r~V~~SS~~VYg~~~~----------~p~~E~~~~~---------------- 253 (436)
T PLN02166 203 NPVKTIKTNVMGTLNMLGLAKRV---GARFLLTSTSEVYGDPLE----------HPQKETYWGN---------------- 253 (436)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHh---CCEEEEECcHHHhCCCCC----------CCCCcccccc----------------
Confidence 35678999999999998876542 358999988654322110 0000000000
Q ss_pred ccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc
Q psy16223 92 VAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV 138 (153)
Q Consensus 92 ~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v 138 (153)
.....+...|+.+|.+.+.+++...+.. ++.+..+.|+.+
T Consensus 254 ~~p~~p~s~Yg~SK~~aE~~~~~y~~~~-------~l~~~ilR~~~v 293 (436)
T PLN02166 254 VNPIGERSCYDEGKRTAETLAMDYHRGA-------GVEVRIARIFNT 293 (436)
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHh-------CCCeEEEEEccc
Confidence 0000113579999999998888776543 466666666544
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.6 Score=34.86 Aligned_cols=92 Identities=23% Similarity=0.119 Sum_probs=59.1
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
+.....++.|+.++..+.+.+...= ..++|++||....+... . ..+.++
T Consensus 83 ~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~i~~sS~~~y~~~~-~---------~~~~e~------------------- 131 (236)
T PF01370_consen 83 EDPEEIIEANVQGTRNLLEAAREAG--VKRFIFLSSASVYGDPD-G---------EPIDED------------------- 131 (236)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHT--TSEEEEEEEGGGGTSSS-S---------SSBETT-------------------
T ss_pred ccccccccccccccccccccccccc--ccccccccccccccccc-c---------cccccc-------------------
Confidence 4567888888888877777754321 25899999954332210 0 000000
Q ss_pred cccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 91 HVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 91 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
... .+...|+.+|...+.+.+.+.++. ++.+..+.|+.+--+.
T Consensus 132 ~~~--~~~~~Y~~~K~~~e~~~~~~~~~~-------~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 132 SPI--NPLSPYGASKRAAEELLRDYAKKY-------GLRVTILRPPNVYGPG 174 (236)
T ss_dssp SGC--CHSSHHHHHHHHHHHHHHHHHHHH-------TSEEEEEEESEEESTT
T ss_pred ccc--cccccccccccccccccccccccc-------cccccccccccccccc
Confidence 000 123679999999999988887765 5889999998876665
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=92.43 E-value=0.38 Score=40.01 Aligned_cols=107 Identities=15% Similarity=0.082 Sum_probs=60.5
Q ss_pred CCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHH
Q psy16223 2 NRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFM 81 (153)
Q Consensus 2 nnag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (153)
|||...--.....+....|..|+..+.+...- .+...+.++||.+..... .. +++..+.-
T Consensus 93 H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~--gk~Kp~~yVSsisv~~~~-~~---------~~~~~~~~-------- 152 (382)
T COG3320 93 HNAALVNHVFPYSELRGANVLGTAEVLRLAAT--GKPKPLHYVSSISVGETE-YY---------SNFTVDFD-------- 152 (382)
T ss_pred ecchhhcccCcHHHhcCcchHhHHHHHHHHhc--CCCceeEEEeeeeecccc-cc---------CCCccccc--------
Confidence 44443333345667888999999988877532 222348889988752110 00 00000000
Q ss_pred HHhhcCCCccccCCCC-CchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 82 DITKEHPRAHVAKGWP-DSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 82 ~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
...+....+-. ...|+.||.+-+.++|.-.. . |..+..+-||+|--+
T Consensus 153 -----~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----r----GLpv~I~Rpg~I~gd 200 (382)
T COG3320 153 -----EISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----R----GLPVTIFRPGYITGD 200 (382)
T ss_pred -----cccccccccCccCCCcchhHHHHHHHHHHHhh----c----CCCeEEEecCeeecc
Confidence 00111111111 46899999999887775443 3 789999999987444
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=91.99 E-value=0.63 Score=36.90 Aligned_cols=46 Identities=20% Similarity=0.068 Sum_probs=30.9
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG 49 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~ 49 (153)
||.|+..... +..+..+++|..|+..+.+.+... +.++|++||..-
T Consensus 59 ih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~---g~~~v~~Ss~~V 107 (299)
T PRK09987 59 VNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV---GAWVVHYSTDYV 107 (299)
T ss_pred EECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEccceE
Confidence 4666654322 234667889999999988876442 458998888543
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.48 E-value=0.77 Score=40.21 Aligned_cols=99 Identities=16% Similarity=0.043 Sum_probs=58.8
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
||+|+........+...++|+.|+..+++.+... ...++|++||....+.... ...++.+...
T Consensus 82 ih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~~SS~~v~g~~~~-----------~~~e~~~~~~---- 144 (657)
T PRK07201 82 VHLAAIYDLTADEEAQRAANVDGTRNVVELAERL--QAATFHHVSSIAVAGDYEG-----------VFREDDFDEG---- 144 (657)
T ss_pred EECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc--CCCeEEEEeccccccCccC-----------ccccccchhh----
Confidence 3666654333345667889999988888775432 1358999998765321100 0000000000
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVAT 140 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T 140 (153)
......|+.+|...+.+.+. .. |+.+..+.|+.|--
T Consensus 145 --------------~~~~~~Y~~sK~~~E~~~~~------~~----g~~~~ilRp~~v~G 180 (657)
T PRK07201 145 --------------QGLPTPYHRTKFEAEKLVRE------EC----GLPWRVYRPAVVVG 180 (657)
T ss_pred --------------cCCCCchHHHHHHHHHHHHH------cC----CCcEEEEcCCeeee
Confidence 00125799999999877652 23 68889999988754
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=91.33 E-value=0.75 Score=37.08 Aligned_cols=73 Identities=15% Similarity=0.065 Sum_probs=52.7
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
+...+.+++|.+|+..+.+....+ .-.++|++|+=.+.. |
T Consensus 95 ~~p~eav~tNv~GT~nv~~aa~~~--~v~~~v~ISTDKAv~-P------------------------------------- 134 (293)
T PF02719_consen 95 DNPFEAVKTNVLGTQNVAEAAIEH--GVERFVFISTDKAVN-P------------------------------------- 134 (293)
T ss_dssp CCHHHHHHHHCHHHHHHHHHHHHT--T-SEEEEEEECGCSS---------------------------------------
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEccccccCC-C-------------------------------------
Confidence 456788999999999999987664 225899999855521 1
Q ss_pred cccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEee
Q psy16223 91 HVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVH 134 (153)
Q Consensus 91 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~ 134 (153)
...|++||...+.++...+....+. +.+..+|-
T Consensus 135 -------tnvmGatKrlaE~l~~~~~~~~~~~----~t~f~~VR 167 (293)
T PF02719_consen 135 -------TNVMGATKRLAEKLVQAANQYSGNS----DTKFSSVR 167 (293)
T ss_dssp --------SHHHHHHHHHHHHHHHHCCTSSSS------EEEEEE
T ss_pred -------CcHHHHHHHHHHHHHHHHhhhCCCC----CcEEEEEE
Confidence 3789999999999999888776444 45555554
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=89.77 E-value=0.95 Score=35.89 Aligned_cols=46 Identities=17% Similarity=0.086 Sum_probs=29.6
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG 49 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~ 49 (153)
||+|+..... ..-+..+++|..++..+.+... ..+.++|++||-.-
T Consensus 56 in~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~---~~~~~li~~STd~V 104 (286)
T PF04321_consen 56 INCAAYTNVDACEKNPEEAYAINVDATKNLAEACK---ERGARLIHISTDYV 104 (286)
T ss_dssp EE------HHHHHHSHHHHHHHHTHHHHHHHHHHH---HCT-EEEEEEEGGG
T ss_pred eccceeecHHhhhhChhhhHHHhhHHHHHHHHHHH---HcCCcEEEeeccEE
Confidence 4666665332 3567899999999999888754 35789999999653
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=89.34 E-value=1.2 Score=42.59 Aligned_cols=115 Identities=15% Similarity=0.069 Sum_probs=62.3
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhh--ccccChHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLM--EDCVSERQLTDMMY 78 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 78 (153)
||+|+.......+.....+|+.|+..+++.+... +..+++++||....+............. ...+.+...
T Consensus 1066 iH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~----- 1138 (1389)
T TIGR03443 1066 IHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG--KAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDD----- 1138 (1389)
T ss_pred EECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC--CCceEEEEeCeeecCcccccchhhhhhhccCCCCCcccc-----
Confidence 4666665444455566678999999998876432 2247999999765321100000000000 000000000
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
- ..........|+.||...+.+++..+. . |+.+..+.||.|--+
T Consensus 1139 ----------~-~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~----g~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443 1139 ----------L-MGSSKGLGTGYGQSKWVAEYIIREAGK----R----GLRGCIVRPGYVTGD 1182 (1389)
T ss_pred ----------c-ccccccCCCChHHHHHHHHHHHHHHHh----C----CCCEEEECCCccccC
Confidence 0 000000135699999999888765432 3 689999999988544
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=88.83 E-value=3.6 Score=36.50 Aligned_cols=48 Identities=17% Similarity=0.147 Sum_probs=34.6
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG 49 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~ 49 (153)
||.|+...+.+..+..+++|+.|+..+++.+... ..-.++|++||...
T Consensus 224 IH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~-~~lk~fV~vSTayV 271 (605)
T PLN02503 224 INSAANTTFDERYDVAIDINTRGPCHLMSFAKKC-KKLKLFLQVSTAYV 271 (605)
T ss_pred EECccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCCeEEEccCcee
Confidence 4667666555668889999999999998876542 12246888888654
|
|
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=88.66 E-value=3.2 Score=33.67 Aligned_cols=76 Identities=17% Similarity=0.072 Sum_probs=47.8
Q ss_pred HHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCcccc
Q psy16223 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVA 93 (153)
Q Consensus 14 ~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (153)
-..++.|.+++..+.....-..+ -.++|++|+-.-.+...-. .. .+ ..-
T Consensus 101 ~~~~~nnil~t~~Lle~~~~sg~-i~~fvhvSTdeVYGds~~~--~~---------~~-------------------E~s 149 (331)
T KOG0747|consen 101 FEFTKNNILSTHVLLEAVRVSGN-IRRFVHVSTDEVYGDSDED--AV---------VG-------------------EAS 149 (331)
T ss_pred HHHhcCCchhhhhHHHHHHhccC-eeEEEEecccceecCcccc--cc---------cc-------------------ccc
Confidence 34578899999998888655432 2478888876543221100 00 00 000
Q ss_pred CCCCCchhHHhHHHHHHHHHHHHHHhc
Q psy16223 94 KGWPDSAYAVSKIGVNLLTRIYQKKFD 120 (153)
Q Consensus 94 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~ 120 (153)
...+...|+++|+|.+++.+++.+.+.
T Consensus 150 ~~nPtnpyAasKaAaE~~v~Sy~~sy~ 176 (331)
T KOG0747|consen 150 LLNPTNPYAASKAAAEMLVRSYGRSYG 176 (331)
T ss_pred cCCCCCchHHHHHHHHHHHHHHhhccC
Confidence 012347899999999999999999884
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=88.57 E-value=2.2 Score=33.90 Aligned_cols=44 Identities=16% Similarity=0.081 Sum_probs=28.9
Q ss_pred CCCCCCCcc------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCC
Q psy16223 1 MNRASTVPF------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSS 47 (153)
Q Consensus 1 innag~~~~------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~ 47 (153)
||.||.... .+.-...+++|..|+..++..+... +.+.+++||.
T Consensus 62 iH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~---gv~~v~~sS~ 111 (298)
T PLN02778 62 FNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER---GLVLTNYATG 111 (298)
T ss_pred EECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCEEEEecc
Confidence 467776521 1335678999999999998887542 3355666653
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=87.70 E-value=3.6 Score=33.73 Aligned_cols=94 Identities=15% Similarity=0.010 Sum_probs=54.8
Q ss_pred HHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCcccc
Q psy16223 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVA 93 (153)
Q Consensus 14 ~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (153)
...+..|+.++..+++++... .-.++|++||....+...... . ..++.++ ...
T Consensus 107 ~~~~~~N~~~t~nll~aa~~~--~vk~~V~~SS~~vYg~~~~~~---~---~~~~~E~-----------------~~~-- 159 (370)
T PLN02695 107 SVIMYNNTMISFNMLEAARIN--GVKRFFYASSACIYPEFKQLE---T---NVSLKES-----------------DAW-- 159 (370)
T ss_pred hhhHHHHHHHHHHHHHHHHHh--CCCEEEEeCchhhcCCccccC---c---CCCcCcc-----------------cCC--
Confidence 445778999988888875321 124899999865332110000 0 0000000 000
Q ss_pred CCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 94 KGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 94 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
.-.+...|+.+|.+.+.+++..+..+ |+.+..+.|+.+--+
T Consensus 160 p~~p~s~Yg~sK~~~E~~~~~~~~~~-------g~~~~ilR~~~vyGp 200 (370)
T PLN02695 160 PAEPQDAYGLEKLATEELCKHYTKDF-------GIECRIGRFHNIYGP 200 (370)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHh-------CCCEEEEEECCccCC
Confidence 00124689999999999988876653 688888888876655
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=85.77 E-value=1.1 Score=36.26 Aligned_cols=94 Identities=22% Similarity=0.213 Sum_probs=64.7
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
+..+.+.+++-+|+..+..++.-.=.+..|+.+-||+--.+ .+...|..
T Consensus 96 e~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG-------------------------------~v~~~pq~ 144 (345)
T COG1089 96 EQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYG-------------------------------LVQEIPQK 144 (345)
T ss_pred cCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhc-------------------------------CcccCccc
Confidence 66778999999999998877543334467888877754321 11223466
Q ss_pred cccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCC
Q psy16223 91 HVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPG 136 (153)
Q Consensus 91 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG 136 (153)
..++..+++.|+++|.--.-.+...+..+.-. +.+||..|.=+|.
T Consensus 145 E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~-AcnGILFNHESP~ 189 (345)
T COG1089 145 ETTPFYPRSPYAVAKLYAYWITVNYRESYGLF-ACNGILFNHESPL 189 (345)
T ss_pred cCCCCCCCCHHHHHHHHHHheeeehHhhcCce-eecceeecCCCCC
Confidence 67778889999999988776666666666532 3337888877775
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=85.39 E-value=1.5 Score=35.90 Aligned_cols=37 Identities=14% Similarity=0.129 Sum_probs=32.1
Q ss_pred chhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 99 ~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
..|+.||.+.+.+++.++.+ . |++++.+.|+.|..+-
T Consensus 214 ~~Y~~sK~~~E~~~~~~~~~---~----gl~~v~lRp~~vyGp~ 250 (367)
T PLN02686 214 LWYALGKLKAEKAAWRAARG---K----GLKLATICPALVTGPG 250 (367)
T ss_pred chHHHHHHHHHHHHHHHHHh---c----CceEEEEcCCceECCC
Confidence 57999999999999887765 3 7999999999998885
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=83.71 E-value=5.4 Score=32.55 Aligned_cols=75 Identities=16% Similarity=0.029 Sum_probs=47.1
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC-C-ccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR-H-ARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHP 88 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~-~-g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (153)
+...+-++-|+.|+..|++. |++ + -+||+.||....+.|.. .++ +
T Consensus 85 ~~Pl~Yy~NNv~gTl~Ll~a----m~~~gv~~~vFSStAavYG~p~~----~PI-------------------------~ 131 (329)
T COG1087 85 QNPLKYYDNNVVGTLNLIEA----MLQTGVKKFIFSSTAAVYGEPTT----SPI-------------------------S 131 (329)
T ss_pred hCHHHHHhhchHhHHHHHHH----HHHhCCCEEEEecchhhcCCCCC----ccc-------------------------C
Confidence 44668899999999988876 443 3 35666555443554331 111 1
Q ss_pred CccccCCCCCchhHHhHHHHHHHHHHHHHHhc
Q psy16223 89 RAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD 120 (153)
Q Consensus 89 ~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~ 120 (153)
.+.++. +...|+.||..++.+.+.++.-..
T Consensus 132 E~~~~~--p~NPYG~sKlm~E~iL~d~~~a~~ 161 (329)
T COG1087 132 ETSPLA--PINPYGRSKLMSEEILRDAAKANP 161 (329)
T ss_pred CCCCCC--CCCcchhHHHHHHHHHHHHHHhCC
Confidence 112222 347899999999999998876553
|
|
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=82.29 E-value=4 Score=35.10 Aligned_cols=48 Identities=17% Similarity=0.189 Sum_probs=35.2
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG 49 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~ 49 (153)
||.|+...+.|..+..+.+|.+|+..+.+.+....+ -...|++|....
T Consensus 111 ih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~-l~~~vhVSTAy~ 158 (467)
T KOG1221|consen 111 IHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVK-LKALVHVSTAYS 158 (467)
T ss_pred EEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhh-hheEEEeehhhe
Confidence 467777788899999999999999999987654333 234666665443
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=82.13 E-value=8.8 Score=34.02 Aligned_cols=45 Identities=16% Similarity=0.101 Sum_probs=30.6
Q ss_pred CCCCCCCc--c----HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCc
Q psy16223 1 MNRASTVP--F----AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSA 48 (153)
Q Consensus 1 innag~~~--~----~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~ 48 (153)
||.|+... . .+..+..+++|..|+..+++.+... +.+++++||..
T Consensus 433 ih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~---g~~~v~~Ss~~ 483 (668)
T PLN02260 433 FNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN---GLLMMNFATGC 483 (668)
T ss_pred EECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc---CCeEEEEcccc
Confidence 46676542 1 1346788999999999999887542 45677776643
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.68 E-value=8.6 Score=33.91 Aligned_cols=73 Identities=15% Similarity=0.068 Sum_probs=53.5
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPR 89 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
....+.+++|.+|+..++.+...+= =.++|.+|+=.+ .+
T Consensus 343 ~nP~Eai~tNV~GT~nv~~aa~~~~--V~~~V~iSTDKAV~P-------------------------------------- 382 (588)
T COG1086 343 YNPEEAIKTNVLGTENVAEAAIKNG--VKKFVLISTDKAVNP-------------------------------------- 382 (588)
T ss_pred cCHHHHHHHhhHhHHHHHHHHHHhC--CCEEEEEecCcccCC--------------------------------------
Confidence 4578899999999999998864321 147888887554 32
Q ss_pred ccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeC
Q psy16223 90 AHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHP 135 (153)
Q Consensus 90 ~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~P 135 (153)
...|+++|...+.++++++.+.... +.+..+|-=
T Consensus 383 --------tNvmGaTKr~aE~~~~a~~~~~~~~----~T~f~~VRF 416 (588)
T COG1086 383 --------TNVMGATKRLAEKLFQAANRNVSGT----GTRFCVVRF 416 (588)
T ss_pred --------chHhhHHHHHHHHHHHHHhhccCCC----CcEEEEEEe
Confidence 2689999999999999998876643 345555443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 153 | ||||
| 1n5d_A | 288 | Crystal Structure Of Porcine Testicular Carbonyl Re | 8e-23 | ||
| 1wma_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Hyd | 3e-22 | ||
| 2pfg_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Big | 5e-21 | ||
| 2hrb_A | 274 | Crystal Structure Of Human Carbonyl Reductase 3, Co | 1e-19 | ||
| 3o26_A | 311 | The Structure Of Salutaridine Reductase From Papave | 4e-07 |
| >pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288 | Back alignment and structure |
|
| >pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276 | Back alignment and structure |
|
| >pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276 | Back alignment and structure |
|
| >pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274 | Back alignment and structure |
|
| >pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 153 | |||
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 8e-43 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 7e-33 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 1e-11 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 1e-11 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 2e-09 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 1e-08 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 1e-07 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 3e-07 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 3e-07 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 1e-06 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 1e-06 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 1e-06 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 4e-06 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 4e-06 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 4e-06 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 5e-06 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 5e-06 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 6e-06 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 6e-06 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 7e-06 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 8e-06 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 9e-06 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 1e-05 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 1e-05 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 1e-05 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 1e-05 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 2e-05 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 2e-05 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 3e-05 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 3e-05 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 3e-05 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 3e-05 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 3e-05 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 4e-05 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 4e-05 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 4e-05 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 4e-05 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 4e-05 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 4e-05 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 5e-05 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 5e-05 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 5e-05 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 5e-05 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 5e-05 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 5e-05 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 5e-05 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 6e-05 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 6e-05 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 6e-05 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 6e-05 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 6e-05 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 7e-05 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 7e-05 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 8e-05 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 8e-05 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 9e-05 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 9e-05 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 1e-04 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 1e-04 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 1e-04 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 1e-04 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 1e-04 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 1e-04 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 1e-04 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 1e-04 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 2e-04 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 2e-04 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 2e-04 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 2e-04 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 2e-04 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 2e-04 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 2e-04 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 2e-04 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 2e-04 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 2e-04 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 3e-04 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 3e-04 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 3e-04 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 3e-04 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 4e-04 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 4e-04 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 5e-04 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 6e-04 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 6e-04 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 6e-04 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 7e-04 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 7e-04 |
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 8e-43
Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITN-LEL 59
A PF IQAE T+ TN+ G C L PL++ RVVN+SS + + EL
Sbjct: 94 FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPEL 153
Query: 60 KKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKF 119
+++ + ++E +L +M +F++ TK+ H +GWP SAY V+KIGV +L+RI+ +K
Sbjct: 154 QQKFRSETITEEELVGLMNKFVEDTKKG--VHQKEGWPSSAYGVTKIGVTVLSRIHARKL 211
Query: 120 DCELGNQDKVINAVHPGYVATNMSSFMG 147
+ ++NA PG+V T+M+
Sbjct: 212 SEQRKGDKILLNACCPGWVRTDMAGPKA 239
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 7e-33
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 12 QAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLM-EDCV 68
AE+ + NY G+ L PLL+ R+VN+SSS G L ++N + L D +
Sbjct: 144 LAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDAL 203
Query: 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPD--SAYAVSKIGVNLLTRIYQKKFDCELGNQ 126
+E ++ ++ + KE+ GWP +AY SK +N TR+ K
Sbjct: 204 TEERIDMVVNMLLKDFKEN--LIETNGWPSFGAAYTTSKACLNAYTRVLANKIP------ 255
Query: 127 DKVINAVHPGYVATNMSSFMG 147
+N V PG V T M+ +G
Sbjct: 256 KFQVNCVCPGLVKTEMNYGIG 276
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-11
Identities = 26/147 (17%), Positives = 44/147 (29%), Gaps = 52/147 (35%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRR-------------HARVVNLSSSAGHLSQITNLELK 60
+ + N +V L PLL+ A V+ +SS G
Sbjct: 107 AEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG----------- 155
Query: 61 KRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD 120
+TD +P AY +SK +N+ R
Sbjct: 156 -----------SITDNTSGSAQ-------------FPVLAYRMSKAAINMFGRTLAV--- 188
Query: 121 CELGNQDKVINAVHPGYVATNMSSFMG 147
+L + + ++ PG+V TN+
Sbjct: 189 -DLKDDNVLVVNFCPGWVQTNLGGKNA 214
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 1e-11
Identities = 27/145 (18%), Positives = 42/145 (28%), Gaps = 24/145 (16%)
Query: 2 NRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLEL 59
A P + NY G P L++ V +SS A
Sbjct: 68 LCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAH-------- 119
Query: 60 KKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWP-DSAYAVSKIGVNLLTRIYQKK 118
++ + E + K A + AYA SK + + R K
Sbjct: 120 -------LAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVR----K 168
Query: 119 FDCELGNQDKV-INAVHPGYVATNM 142
G + V +N + PG T +
Sbjct: 169 RAAAWG-EAGVRLNTIAPGATETPL 192
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 2e-09
Identities = 27/132 (20%), Positives = 35/132 (26%), Gaps = 49/132 (37%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLR--RHARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71
+ + N L PLL+ A + SSS G
Sbjct: 120 MQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGR--------------------- 158
Query: 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-I 130
RA W AY VSK L + EL V
Sbjct: 159 ---------------KGRA----NW--GAYGVSKFATEGLMQTLAD----ELEGVTAVRA 193
Query: 131 NAVHPGYVATNM 142
N+++PG T M
Sbjct: 194 NSINPGATRTGM 205
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 1e-08
Identities = 25/147 (17%), Positives = 42/147 (28%), Gaps = 56/147 (38%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRR-------------HARVVNLSSSAGHLSQITNLELK 60
T+ TN + + PLL++ A ++N+SS G
Sbjct: 128 LDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG----------- 176
Query: 61 KRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD 120
+ AY SK +N T+
Sbjct: 177 -----------SIQGNT-----------------DGGMYAYRTSKSALNAATKSLSV--- 205
Query: 121 CELGNQDKVINAVHPGYVATNMSSFMG 147
+L Q + ++HPG+V T+M
Sbjct: 206 -DLYPQRIMCVSLHPGWVKTDMGGSSA 231
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 1e-07
Identities = 25/131 (19%), Positives = 35/131 (26%), Gaps = 49/131 (37%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLR--RHARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71
+ + N L PLL +V SSS G
Sbjct: 118 QDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGR--------------------- 156
Query: 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVIN 131
RA W AYA SK + ++ E + +V N
Sbjct: 157 ---------------QGRA----NW--GAYAASKFATEGMMQVLAD----EYQQRLRV-N 190
Query: 132 AVHPGYVATNM 142
++PG T M
Sbjct: 191 CINPGGTRTAM 201
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 3e-07
Identities = 29/143 (20%), Positives = 43/143 (30%), Gaps = 22/143 (15%)
Query: 2 NRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLEL 59
A A + + NY G+ L L R V + S A L
Sbjct: 68 CCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAEL-- 125
Query: 60 KKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKF 119
++E ++ + A G AYA SK V L R +
Sbjct: 126 --PMVEAMLAGD-----------EARAIELAEQQ-GQTHLAYAGSKYAVTCLAR----RN 167
Query: 120 DCELGNQDKVINAVHPGYVATNM 142
+ + +N V PG V T +
Sbjct: 168 VVDWAGRGVRLNVVAPGAVETPL 190
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 3e-07
Identities = 25/135 (18%), Positives = 37/135 (27%), Gaps = 48/135 (35%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73
++ N G T L PL+R +V SS A
Sbjct: 107 DRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADE----------------------- 143
Query: 74 TDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINA 132
G P S Y+ SK + + EL + +N+
Sbjct: 144 --------------------GGHPGMSVYSASKAALVSFASVLAA----ELLPRGIRVNS 179
Query: 133 VHPGYVATNMSSFMG 147
V PG++ T G
Sbjct: 180 VSPGFIDTPTKGVAG 194
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-06
Identities = 27/131 (20%), Positives = 37/131 (28%), Gaps = 50/131 (38%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73
+ T N G++ T PLL R + VV S+AG
Sbjct: 128 DDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS----------------------- 164
Query: 74 TDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-IN 131
G P S YA SK + R + +L + IN
Sbjct: 165 --------------------TGTPAFSVYAASKAALRSFARNWIL----DLK-DRGIRIN 199
Query: 132 AVHPGYVATNM 142
+ PG T
Sbjct: 200 TLSPGPTETTG 210
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-06
Identities = 37/145 (25%), Positives = 47/145 (32%), Gaps = 53/145 (36%)
Query: 14 EKTILTNYLG---LVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSE 70
E I TN+LG L L P L RVV +SS A +I
Sbjct: 109 ESQIGTNHLGHFALTNL---LLPRLT--DRVVTVSSMAHWPGRI---------------- 147
Query: 71 RQLTDMMYEFMDITKEHPRAHVAKGW-PDSAYAVSKIGVNLLTRIYQKKFDCEL-----G 124
D+ + + P AY+ SK+ NLL F EL
Sbjct: 148 --------NLEDLNWRS------RRYSPWLAYSQSKLA-NLL-------FTSELQRRLTA 185
Query: 125 NQDKVI-NAVHPGYVATNMSSFMGN 148
+ A HPGY TN+ G
Sbjct: 186 AGSPLRALAAHPGYSHTNLQGASGR 210
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-06
Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 48/130 (36%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73
++ + N LR ++R++N+SS+A +
Sbjct: 116 DRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI---------------------- 153
Query: 74 TDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINA 132
PD AY+++K +N +T K +LG + +NA
Sbjct: 154 ---------------------SLPDFIAYSMTKGAINTMTFTLAK----QLGARGITVNA 188
Query: 133 VHPGYVATNM 142
+ PG+V T+M
Sbjct: 189 ILPGFVKTDM 198
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 4e-06
Identities = 29/130 (22%), Positives = 42/130 (32%), Gaps = 48/130 (36%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73
++ I N G T LR R++N+S+S L
Sbjct: 130 DRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL---------------------- 167
Query: 74 TDMMYEFMDITKEHPRAHVAKGWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVINA 132
P YA +K GV +T + K EL +D +NA
Sbjct: 168 ---------------------LHPSYGIYAAAKAGVEAMTHVLSK----ELRGRDITVNA 202
Query: 133 VHPGYVATNM 142
V PG AT++
Sbjct: 203 VAPGPTATDL 212
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 4e-06
Identities = 20/130 (15%), Positives = 35/130 (26%), Gaps = 47/130 (36%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73
++ N G + L R++ + S G
Sbjct: 132 DRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQ----------------------- 168
Query: 74 TDMMYEFMDITKEHPRAHVAKGWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVINA 132
AK P A Y+ SK + R ++ ++ +N
Sbjct: 169 -------------------AKAVPKHAVYSGSKGAIETFARCMAI----DMADKKITVNV 205
Query: 133 VHPGYVATNM 142
V PG + T+M
Sbjct: 206 VAPGGIKTDM 215
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 4e-06
Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 47/130 (36%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73
++ + N+ L R++ + S ++E
Sbjct: 134 DEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS--------------------NLAEL-- 171
Query: 74 TDMMYEFMDITKEHPRAHVAKGWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVINA 132
WP + Y+ SK + LT+ + +LG + +N
Sbjct: 172 --------------------VPWPGISLYSASKAALAGLTKGLAR----DLGPRGITVNI 207
Query: 133 VHPGYVATNM 142
VHPG T+M
Sbjct: 208 VHPGSTDTDM 217
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 5e-06
Identities = 14/132 (10%), Positives = 24/132 (18%), Gaps = 50/132 (37%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73
+ I N + LL + V +SA
Sbjct: 113 KGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAAL----------------------- 149
Query: 74 TDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVI-- 130
AY +K + + + E G
Sbjct: 150 --------------------NRTSGMIAYGATKAATHHIIKD----LASENGGLPAGSTS 185
Query: 131 NAVHPGYVATNM 142
+ P + T
Sbjct: 186 LGILPVTLDTPT 197
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 5e-06
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 94 KGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-INAVHPGYVATNMSSFMG 147
PD Y+++K ++ TR +L Q + +N++ PG VAT S MG
Sbjct: 154 HATPDFPYYSIAKAAIDQYTRNTAI----DLI-QHGIRVNSISPGLVATGFGSAMG 204
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 6e-06
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-INAVHPGYVATNMS 143
S Y+ SK +N +T K CE +D + +N+V PG + T +
Sbjct: 169 SLYSASKGAINQMT----KSLACEWA-KDNIRVNSVAPGVILTPLV 209
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 6e-06
Identities = 25/130 (19%), Positives = 36/130 (27%), Gaps = 47/130 (36%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73
+K N G RR R++ SS A
Sbjct: 124 DKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAA------------------------ 159
Query: 74 TDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINA 132
V G P+ + YA SK V R + + G + +N
Sbjct: 160 ------------------VMTGIPNHALYAGSKAAVEGFCRAFAV----DCGAKGVTVNC 197
Query: 133 VHPGYVATNM 142
+ PG V T+M
Sbjct: 198 IAPGGVKTDM 207
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 7e-06
Identities = 24/130 (18%), Positives = 37/130 (28%), Gaps = 47/130 (36%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73
++ N G + L R+V SS+
Sbjct: 121 DRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK----------------------- 157
Query: 74 TDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINA 132
P S Y+ SK V+ RI+ K + G++ +NA
Sbjct: 158 -------------------DFSVPKHSLYSGSKGAVDSFVRIFSK----DCGDKKITVNA 194
Query: 133 VHPGYVATNM 142
V PG T+M
Sbjct: 195 VAPGGTVTDM 204
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 8e-06
Identities = 10/135 (7%), Positives = 25/135 (18%), Gaps = 49/135 (36%)
Query: 12 QAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71
+ TI + G + + L +
Sbjct: 81 KNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMME--------------------- 119
Query: 72 QLTDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVI 130
++ A++ V + E+ ++
Sbjct: 120 ----------------------DPIVQGASAAMANGAVTAFAKSAAI----EMPRGIRI- 152
Query: 131 NAVHPGYVATNMSSF 145
N V P + +
Sbjct: 153 NTVSPNVLEESWDKL 167
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 9e-06
Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 7/51 (13%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVI--NAVHPGYVATNM 142
+ Y+ SK V+ LTR Q I N++HP + T M
Sbjct: 144 PIEQYAGYSASKAAVSALTRAAA----LSCRKQGYAIRVNSIHPDGIYTPM 190
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 1e-05
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVI--NAVHPGYVATNM 142
G P AY SK V ++++ + +D + N VHPGY+ T +
Sbjct: 148 GDPSLGAYNASKGAVRIMSKSAAL----DCALKDYDVRVNTVHPGYIKTPL 194
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 1e-05
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-INAVHPGYVATNMS 143
+ Y +K ++ LT + E +D + +N V PG +AT++
Sbjct: 157 AVYGATKGAMDQLT----RCLAFEWA-KDNIRVNGVGPGVIATSLV 197
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-05
Identities = 25/132 (18%), Positives = 39/132 (29%), Gaps = 53/132 (40%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLR-RHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQ 72
+K N+ +V P L+ + VV +SS A ++
Sbjct: 104 KKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYF------------------- 144
Query: 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVI-- 130
W AY SK +N L N+++ +
Sbjct: 145 ---------------------SSW--GAYGSSKAALNHFAMT--------LANEERQVKA 173
Query: 131 NAVHPGYVATNM 142
AV PG V T+M
Sbjct: 174 IAVAPGIVDTDM 185
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 1e-05
Identities = 20/130 (15%), Positives = 34/130 (26%), Gaps = 48/130 (36%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73
+K + N + L L+ A +V S
Sbjct: 95 KKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCF----------------------- 131
Query: 74 TDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINA 132
P+ AY +SK + +T+ +L +N
Sbjct: 132 --------------------IAKPNSFAYTLSKGAIAQMTKSLAL----DLAKYQIRVNT 167
Query: 133 VHPGYVATNM 142
V PG V T++
Sbjct: 168 VCPGTVDTDL 177
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-05
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
Y SK G+ TR L N +NA+ PG+V T +
Sbjct: 151 PVYCASKHGIVGFTR--SAALAANLMNSGVRLNAICPGFVNTAI 192
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-05
Identities = 16/131 (12%), Positives = 33/131 (25%), Gaps = 49/131 (37%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLR-RHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQ 72
+ + +N + + L+ R + N+ SSA
Sbjct: 102 RRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQ---------------------- 139
Query: 73 LTDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVIN 131
G + S Y SK G+ + EL + +
Sbjct: 140 ---------------------VGKANESLYCASKWGMRGFLESLRA----ELKDSPLRLV 174
Query: 132 AVHPGYVATNM 142
++P + +
Sbjct: 175 NLYPSGIRSEF 185
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-05
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
Query: 94 KGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-INAVHPGYVATNM 142
K +P Y +K GV L R + ELG Q + +N+VHP +V T M
Sbjct: 170 KAYPHTGHYVAAKHGVVGLMRAFGV----ELG-QHMIRVNSVHPTHVKTPM 215
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 3e-05
Identities = 13/132 (9%), Positives = 25/132 (18%), Gaps = 50/132 (37%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73
+ + + L+ + + A
Sbjct: 102 DLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL----------------------- 138
Query: 74 TDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVI-- 130
G P Y ++K V+ L + +
Sbjct: 139 --------------------DGTPGMIGYGMAKGAVHQLCQS----LAGKNSGMPSGAAA 174
Query: 131 NAVHPGYVATNM 142
AV P + T M
Sbjct: 175 IAVLPVTLDTPM 186
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 3e-05
Identities = 22/129 (17%), Positives = 37/129 (28%), Gaps = 35/129 (27%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73
+++G++ T P L A ++ S AG L
Sbjct: 122 ADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAG-----------------------L 158
Query: 74 TDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAV 133
+ P + Y+ +K V+ T +L Q N +
Sbjct: 159 IAAAQPPGAGGPQGPGG--------AGYSYAKQLVDSYTLQLAA----QLAPQSIRANVI 206
Query: 134 HPGYVATNM 142
HP V T+M
Sbjct: 207 HPTNVNTDM 215
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 3e-05
Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 8/50 (16%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-INAVHPGYVATNM 142
+ SAY SK V LT+ + + NAV P + T +
Sbjct: 139 ITKNASAYVTSKHAVIGLTKSIAL----DYA--PLLRCNAVCPATIDTPL 182
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 3e-05
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-INAVHPGYVATNM 142
AY +SK G+ L+RI EL + N + P +V T M
Sbjct: 168 AVGGTGAYGMSKAGIIQLSRITAA----ELR-SSGIRSNTLLPAFVDTPM 212
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 41.3 bits (98), Expect = 4e-05
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
G + Y V+K G+ LTR G+Q AV PG V TN+
Sbjct: 150 GGFAGAPYTVAKHGLIGLTRSIAA----HYGDQGIRAVAVLPGTVKTNI 194
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-05
Identities = 21/136 (15%), Positives = 40/136 (29%), Gaps = 55/136 (40%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQ 72
K++ N+L V V P+L++ + +V +SS AG ++
Sbjct: 131 RKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA-------------------- 170
Query: 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC---ELGNQDKV 129
+P +AY+ SK ++ F E
Sbjct: 171 --------------YPMV--------AAYSASKFALDGF-------FSSIRKEYSVSRVN 201
Query: 130 I--NAVHPGYVATNMS 143
+ G + T +
Sbjct: 202 VSITLCVLGLIDTETA 217
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 4e-05
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Query: 94 KGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
K P Y SK V L R + ELG +N+VHPG V T M
Sbjct: 166 KMQPFMIHYTASKHAVTGLARAFAA----ELGKHSIRVNSVHPGPVNTPM 211
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 4e-05
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-INAVHPGYVATNMSSFM 146
G Y +K V LT+ ELG + +N++HPG V T M+ ++
Sbjct: 146 GTVACHGYTATKFAVRGLTKSTAL----ELG-PSGIRVNSIHPGLVKTPMTDWV 194
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 4e-05
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 6/54 (11%)
Query: 90 AHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-INAVHPGYVATNM 142
+ A Y +K V LT ELG + + +N V P VA+ +
Sbjct: 156 SFTAGEGVSHVYTATKHAVLGLTTSLC----TELG-EYGIRVNCVSPYIVASPL 204
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 4e-05
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
+ +AYA +K + LTR + G NA+ PG V T
Sbjct: 152 AYDMSTAYACTKAAIETLTRYVAT----QYGRHGVRCNAIAPGLVRTPR 196
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 5e-05
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
G P+ +AY SK + LT +L + +NA+ PGY+
Sbjct: 150 GPPNMAAYGTSKGAIIALTETAAL----DLAPYNIRVNAISPGYMGPGF 194
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 5e-05
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
G S+Y SK GV L+++ ELG +N+VHPG T M
Sbjct: 144 GLALTSSYGASKWGVRGLSKLAAV----ELGTDRIRVNSVHPGMTYTPM 188
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 40.5 bits (96), Expect = 5e-05
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
+P SAY SK V LT+ + NAV PG + T M
Sbjct: 148 AFPGRSAYTTSKGAVLQLTKSVAV----DYAGSGIRCNAVCPGMIETPM 192
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 5e-05
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 90 AHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
G+ + YA SK G+ L + ELG + +NA+ PG T
Sbjct: 147 VGHTAGFAGVAPYAASKAGLIGLVQALAV----ELGARGIRVNALLPGGTDTPA 196
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 5e-05
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Query: 95 GWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
WP YA SK G+ L+T E + +N + PG + T +
Sbjct: 151 PWPLFVHYAASKGGMKLMTETLAL----EYAPKGIRVNNIGPGAINTPI 195
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 5e-05
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 90 AHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
P +AY +K + + ELG +NAV PG + TN+
Sbjct: 168 GTRTFTTPGATAYTATKAAQVAIVQQLAL----ELGKHHIRVNAVCPGAIETNI 217
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 40.5 bits (96), Expect = 5e-05
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Query: 94 KGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
+ +AY SK G+ LTR +L +NAV PG +AT
Sbjct: 141 FAEQENAAYNASKGGLVNLTRSLAL----DLAPLRIRVNAVAPGAIATEA 186
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 6e-05
Identities = 17/132 (12%), Positives = 29/132 (21%), Gaps = 49/132 (37%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRH---ARVVNLSSSAGHLSQITNLELKKRLMEDCVSE 70
I + G + P L + +S AG +
Sbjct: 133 RWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGL-------------- 178
Query: 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVI 130
Y V+K GV L + E+ +
Sbjct: 179 ----------------------------GTYGVAKYGVVGLAETLAR----EVKPNGIGV 206
Query: 131 NAVHPGYVATNM 142
+ + P V T +
Sbjct: 207 SVLCPMVVETKL 218
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 6e-05
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146
AY V+K V+ L + ELG +N++ PG + T++ + +
Sbjct: 162 GAYGVTKSAVDHLM----QLAADELGASWVRVNSIRPGLIRTDLVAAI 205
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 6e-05
Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-INAVHPGYVATNM 142
G Y +K V +T+ + V +N + PG + T +
Sbjct: 147 GQAQAVPYVATKGAVTAMTKALAL----DES-PYGVRVNCISPGNIWTPL 191
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 6e-05
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143
S Y+ +K +N L + CE + NAV P +AT ++
Sbjct: 162 SIYSATKGALNQLA----RNLACEWASDGIRANAVAPAVIATPLA 202
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 6e-05
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 94 KGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-INAVHPGYVATNMSSFMG 147
+ PD YA++K ++ TR +L + + +N+V PG V T ++ MG
Sbjct: 154 QAQPDFLYYAIAKAALDQYTRSTAI----DLA-KFGIRVNSVSPGMVETGFTNAMG 204
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 7e-05
Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 91 HVAKGWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMGN 148
+ + VSK + LTR EL + ++NAV G + T+ N
Sbjct: 143 GSIRYLENYTTVGVSKAALEALTRYLAV----ELSPKQIIVNAVSGGAIDTDALKHFPN 197
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 7e-05
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 94 KGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
+G + Y SK G++ L R ELG ++ +N V P VAT M
Sbjct: 183 RGAENIGNYIASKHGLHGLMRTMAL----ELGPRNIRVNIVCPSSVATPM 228
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 8e-05
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
G + S YA +K GV LTR E G INA+ PG + T M
Sbjct: 158 GIGNQSGYAAAKHGVVGLTRNSAV----EYGRYGIRINAIAPGAIWTPM 202
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 8e-05
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
Y +K GV L R+Y L Q +N++HP V T M
Sbjct: 173 VGYVAAKHGVVGLMRVYAN----LLAGQMIRVNSIHPSGVETPM 212
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 9e-05
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 90 AHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
+ A S Y +K +++LT++ ELG +NAV+P V T+M
Sbjct: 139 SQRA-VTNHSVYCSTKGALDMLTKV----MALELGPHKIRVNAVNPTVVMTSM 186
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 9e-05
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
Y+ SK G+ LT ELG +N++HP V T M
Sbjct: 176 GHYSASKHGLTALTNTLAI----ELGEYGIRVNSIHPYSVETPM 215
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 1e-04
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
Y+ +K + +LT+ ELG +N+V+P V T+M
Sbjct: 147 ITYSSTKGAMTMLTKA----MAMELGPHKIRVNSVNPTVVLTDM 186
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 1e-04
Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 5/54 (9%)
Query: 95 GWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147
P SA Y +K + LT+ + D + G T M+ M
Sbjct: 170 PRPYSAPYTATKHAITGLTKSTSL----DGRVHDIACGQIDIGNADTPMAQKMK 219
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 1e-04
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 8/50 (16%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-INAVHPGYVATNM 142
+ +AY SK + LTR + K+ NAV PG + T M
Sbjct: 146 ATKNAAAYVTSKHALLGLTRSVAI----DYA--PKIRCNAVCPGTIMTPM 189
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 1e-04
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 92 VAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
V + S+Y SK V+ LTR E + +NA+ PGYVAT M
Sbjct: 150 VNRPQFASSYMASKGAVHQLTRA----LAAEWAGRGVRVNALAPGYVATEM 196
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 1e-04
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 95 GWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147
P+SA Y +K + LT+ + D + G AT+M++ M
Sbjct: 179 PRPNSAPYTATKHAITGLTKSTAL----DGRMHDIACGQIDIGNAATDMTARMS 228
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 1e-04
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146
+AY SK GV+ + E NAV P Y+ T ++ F
Sbjct: 163 AAYNASKAGVHQYI----RSLAAEWAPHGIRANAVAPTYIETTLTRFG 206
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 1e-04
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 95 GWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
+ Y +K G+ +LT E + NA+ PGY+ T+M
Sbjct: 153 RPTVAPYTAAKGGIKMLTCS----MAAEWAQFNIQTNAIGPGYILTDM 196
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 39.4 bits (93), Expect = 1e-04
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 91 HVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
+A S YA +K V TR K EL Q +NA+ PG + T+
Sbjct: 150 LLAAYTGFYSTYAGNKAPVEHYTRAASK----ELMKQQISVNAIAPGPMDTSF 198
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 39.5 bits (93), Expect = 2e-04
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
Query: 94 KGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147
+ YA +K ++ TR +L +N+V PG VAT MG
Sbjct: 172 QAHSGYPYYACAKAALDQYTRCTAI----DLIQHGVRVNSVSPGAVATGFMGAMG 222
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 39.5 bits (93), Expect = 2e-04
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 95 GWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
G +AYA SK V LT + E + +NA+ PGYV T
Sbjct: 172 GRNVAAYAASKHAVVGLT----RALASEWAGRGVGVNALAPGYVVTAN 215
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 39.1 bits (92), Expect = 2e-04
Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Query: 90 AHVAKGWP--DSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
G YA SK ++ T + E+ + +NAV PG + T++
Sbjct: 168 MAAILGSATQYVDYAASKAAIDTFTIGLAR----EVAAEGIRVNAVRPGIIETDL 218
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 39.1 bits (92), Expect = 2e-04
Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Query: 94 KGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
D +AY SK ++ LTR + + +NAV PG + +
Sbjct: 165 SAIADRTAYVASKGAISSLTRAMAM----DHAKEGIRVNAVAPGTIDSPY 210
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317 | Back alignment and structure |
|---|
Score = 39.2 bits (92), Expect = 2e-04
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
S YA SK GV L E+G + +N+V+PG V T M
Sbjct: 206 SHYAASKHGVQGLMLSLAN----EVGRHNIRVNSVNPGAVNTEM 245
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 39.1 bits (92), Expect = 2e-04
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 95 GWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146
G AY SK ++ L+R+ EL + +N + PG + M+ +
Sbjct: 176 GEQAYAYGPSKAALHQLSRM----LAKELVGEHINVNVIAPGRFPSRMTRHI 223
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Query: 100 AYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
AY +K + LT + E +N + PGYV T
Sbjct: 143 AYTTAKTALLGLT----RALAKEWARLGIRVNLLCPGYVETEF 181
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 39.1 bits (92), Expect = 2e-04
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
PD AY SK G+ + T K ELG N+V P V T M
Sbjct: 164 PLPDHYAYCTSKAGLVMAT----KVLARELGPHGIRANSVCPTVVLTEM 208
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 38.8 bits (91), Expect = 2e-04
Identities = 12/132 (9%), Positives = 24/132 (18%), Gaps = 50/132 (37%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73
+ I + L+ + ++A
Sbjct: 98 DLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM----------------------- 134
Query: 74 TDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVI-- 130
P Y ++K V+ LT +
Sbjct: 135 --------------------GPTPSMIGYGMAKAAVHHLTSS----LAAKDSGLPDNSAV 170
Query: 131 NAVHPGYVATNM 142
+ P + T M
Sbjct: 171 LTIMPVTLDTPM 182
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 38.9 bits (91), Expect = 2e-04
Identities = 16/139 (11%), Positives = 28/139 (20%), Gaps = 52/139 (37%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRR----HARVVNLSSSAGHLSQITNLELKKRLMEDCVS 69
N ++ + VVN+SS
Sbjct: 120 NNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL------------------- 160
Query: 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKV 129
KGW Y K ++L ++ E
Sbjct: 161 ---------------------QPYKGW--GLYCAGKAARDMLYQVLAA----E--EPSVR 191
Query: 130 INAVHPGYVATNMSSFMGN 148
+ + PG + +M
Sbjct: 192 VLSYAPGPLDNDMQQLARE 210
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 38.6 bits (91), Expect = 3e-04
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146
Y VSK + LT+ EL ++ +N + PG + TN S +
Sbjct: 162 GPYNVSKTALLGLTKNLAV----ELAPRNIRVNCLAPGLIKTNFSQVL 205
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 38.7 bits (91), Expect = 3e-04
Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 92 VAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146
+ S Y SK V LT K EL +N+V PGY+ T + +
Sbjct: 175 INIPQQVSHYCTSKAAVVHLT----KAMAVELAPHQIRVNSVSPGYIRTELVEPL 225
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 38.7 bits (91), Expect = 3e-04
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-INAVHPGYVATNM-SSFMG 147
P+ + Y +K V +T+ EL K+ + A++P T + ++FMG
Sbjct: 153 PRPNLAWYNATKGWVVSVTKALAI----ELA-PAKIRVVALNPVAGETPLLTTFMG 203
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 38.2 bits (90), Expect = 4e-04
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
++YA SK + L R +LG ++ +N + PG + T+
Sbjct: 157 TSYASSKAAASHLVRNMAF----DLGEKNIRVNGIAPGAILTDA 196
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 38.0 bits (89), Expect = 4e-04
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Query: 91 HVAKGWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
P Y ++K + LTR EL + +NAV PG
Sbjct: 171 MTDLPLPGFCVYTMAKHALGGLTRAAAL----ELAPRHIRVNAVAPGLSLLPP 219
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 37.9 bits (89), Expect = 5e-04
Identities = 11/53 (20%), Positives = 16/53 (30%), Gaps = 6/53 (11%)
Query: 91 HVAKGWPDSA-YAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
KG Y +K G+ LT + KV N + P +
Sbjct: 159 VTRKGSSKHIAYCATKAGLESLTLSFAA----RFAPLVKV-NGIAPALLMFQP 206
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 37.9 bits (89), Expect = 6e-04
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
SAYA SK GV LT K E G +N + PG+ T M
Sbjct: 170 SAYAASKGGVASLT----KALAKEWGRYGIRVNVIAPGWYRTKM 209
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 37.9 bits (89), Expect = 6e-04
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 5/50 (10%)
Query: 94 KGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
KG + Y+ +K V LT+ + Q N V PG V T
Sbjct: 139 KGVVNRCVYSTTKAAVIGLTKSVAA----DFIQQGIRCNCVCPGTVDTPS 184
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 37.5 bits (88), Expect = 6e-04
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Query: 95 GWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
P + Y ++K + LT+ + Q INAV P V T M
Sbjct: 159 PGPGHALYCLTKAALASLTQCMGM----DHAPQGIRINAVCPNEVNTPM 203
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 37.6 bits (88), Expect = 7e-04
Identities = 27/138 (19%), Positives = 35/138 (25%), Gaps = 59/138 (42%)
Query: 14 EKTILTNYLGLVRTC-VFLFPLL--RRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSE 70
EKT N L T FL P + H +V ++S+AGH+S
Sbjct: 133 EKTFEVNVLAHFWTTKAFL-PAMTKNNHGHIVTVASAAGHVSV----------------- 174
Query: 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC---EL--GN 125
P AY SK EL
Sbjct: 175 -----------------PFL--------LAYCSSKFAAVGFH-------KTLTDELAALQ 202
Query: 126 QDKV-INAVHPGYVATNM 142
V + P +V T
Sbjct: 203 ITGVKTTCLCPNFVNTGF 220
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 37.5 bits (88), Expect = 7e-04
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 95 GWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144
G P + +++K G+N +TR E +NAV PG + T M
Sbjct: 164 GMPSALASLTKGGLNAVTRSLAM----EFSRSGVRVNAVSPGVIKTPMHP 209
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 153 | |||
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.9 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.9 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.89 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.89 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.88 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.88 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.87 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.85 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.84 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.8 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.8 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.8 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.8 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.8 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.79 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.79 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.79 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.79 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.79 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.79 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.79 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.79 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.79 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.79 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.78 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.78 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.78 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.78 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.78 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.78 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.78 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.78 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.78 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.78 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.78 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.78 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.78 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.78 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.77 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.77 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.77 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.77 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.77 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.77 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.77 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.77 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.77 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.77 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.77 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.77 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.77 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.77 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.77 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.77 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.76 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.76 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.76 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.76 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.76 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.76 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.76 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.76 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.76 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.76 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.76 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.76 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.76 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.76 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.76 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.76 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.76 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.75 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.75 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.75 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.75 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.75 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.75 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.75 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.75 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.75 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.75 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.75 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.75 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.75 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.75 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.75 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.75 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.74 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.74 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.74 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.74 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.74 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.74 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.74 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.74 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.74 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.74 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.74 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.74 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.74 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.74 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.74 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.74 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.74 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.74 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.74 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.73 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.73 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.73 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.73 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.73 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.73 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.73 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.73 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.73 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.73 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.73 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.73 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.73 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.72 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.72 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.72 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.72 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.72 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.72 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.72 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.72 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.72 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.72 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.72 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.72 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.72 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.72 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.72 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.72 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.72 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.71 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.71 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.71 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.71 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.71 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.71 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.71 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.71 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.71 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.71 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.71 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.71 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.71 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.71 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.7 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.7 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.7 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.7 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.7 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.7 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.7 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.7 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.7 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.7 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.7 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.7 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.69 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.69 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.69 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.69 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.69 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.68 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.68 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.68 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.68 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.68 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.68 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.67 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.67 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.67 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.67 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.67 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.66 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.66 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.66 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.66 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.65 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.65 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.64 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.64 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.63 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.63 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.63 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.62 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.62 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.62 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.62 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.61 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.61 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.61 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.6 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.6 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.6 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.59 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.59 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.59 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.59 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.58 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.58 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.58 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.58 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.57 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.57 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.57 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.56 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.55 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.53 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.48 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.45 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.31 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.3 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.26 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.25 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.24 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.05 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 98.99 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.91 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.89 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.78 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 98.77 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 98.69 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 98.63 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 98.62 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 98.61 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 98.61 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 98.6 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 98.59 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 98.5 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.47 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 98.46 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 98.43 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 98.4 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 98.39 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 98.37 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 98.3 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 98.29 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 98.29 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 98.28 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 98.27 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 98.27 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 98.26 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 98.2 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 98.2 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 98.18 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 98.18 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 98.16 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 98.08 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 98.04 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 98.04 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.03 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 98.02 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 98.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 97.99 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 97.95 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 97.94 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 97.94 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 97.93 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 97.92 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 97.91 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 97.9 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 97.9 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 97.89 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 97.87 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 97.85 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 97.84 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 97.84 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 97.83 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 97.81 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 97.81 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 97.8 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 97.78 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 97.77 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 97.75 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 97.74 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 97.72 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 97.7 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 97.67 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 97.66 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 97.59 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 97.59 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 97.52 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 97.47 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 97.43 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 97.42 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 97.38 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 97.29 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 97.11 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 97.05 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 96.99 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 96.95 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 96.9 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 96.87 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 96.35 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 96.02 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 95.09 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 94.77 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 94.59 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 92.72 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 92.43 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 89.31 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 87.98 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 87.55 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 87.28 |
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.6e-24 Score=165.75 Aligned_cols=100 Identities=23% Similarity=0.271 Sum_probs=85.1
Q ss_pred CCCCCCCccH-----HHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChHHH
Q psy16223 1 MNRASTVPFA-----IQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQL 73 (153)
Q Consensus 1 innag~~~~~-----~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 73 (153)
|||||+..+. ++|++++++|+.|+|+++|.++|.|++ +|+||++||..+ .+.+.
T Consensus 83 VNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~------------------- 143 (242)
T 4b79_A 83 VNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSAD------------------- 143 (242)
T ss_dssp EECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSS-------------------
T ss_pred EECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCC-------------------
Confidence 6999986443 789999999999999999999999965 799999999988 54432
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 74 TDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||+++..|+|+|+.||.++ |||||+|+||+|+|+|.....
T Consensus 144 ------------------------~~~Y~asKaav~~ltr~lA~Ela~~----gIrVNaV~PG~i~T~m~~~~~ 189 (242)
T 4b79_A 144 ------------------------RPAYSASKGAIVQLTRSLACEYAAE----RIRVNAIAPGWIDTPLGAGLK 189 (242)
T ss_dssp ------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCC-----C
T ss_pred ------------------------CHHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeCCCCChhhhccc
Confidence 4789999999999999999999999 999999999999999987653
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=163.94 Aligned_cols=100 Identities=24% Similarity=0.252 Sum_probs=87.4
Q ss_pred CCCCCCCc----c----HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP----F----AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~----~----~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||+.. . .++|++++++|+.|+|+++|.++|+|++ +|+||++||..+ .+.+.
T Consensus 89 VNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~--------------- 153 (254)
T 4fn4_A 89 CNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFA--------------- 153 (254)
T ss_dssp EECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSS---------------
T ss_pred EECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCC---------------
Confidence 69999642 1 2789999999999999999999999954 699999999998 54332
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||+|+.+|+|+|+.||.++ |||||+|+||+|+|+|.....
T Consensus 154 ----------------------------~~~Y~asKaal~~ltr~lA~ela~~----gIrVN~V~PG~i~T~~~~~~~ 199 (254)
T 4fn4_A 154 ----------------------------GAPYTVAKHGLIGLTRSIAAHYGDQ----GIRAVAVLPGTVKTNIGLGSS 199 (254)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSSCTTSCS
T ss_pred ----------------------------ChHHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEeCCCCCccccccc
Confidence 4789999999999999999999999 999999999999999976553
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-23 Score=162.92 Aligned_cols=98 Identities=24% Similarity=0.316 Sum_probs=86.3
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhc---CCccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLR---RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~---~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||+... .++|++++++|+.|+|+++|.++|.|. ++|+||++||..+ .+.+.
T Consensus 84 VNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~--------------- 148 (247)
T 4hp8_A 84 VNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIR--------------- 148 (247)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSS---------------
T ss_pred EECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCC---------------
Confidence 699998632 278999999999999999999999994 2589999999988 54432
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++.+|+|+|+.||.++ |||||+|+||+|+|+|...
T Consensus 149 ----------------------------~~~Y~asKaav~~ltr~lA~Ela~~----gIrVNaV~PG~i~T~~~~~ 192 (247)
T 4hp8_A 149 ----------------------------VPSYTAAKHGVAGLTKLLANEWAAK----GINVNAIAPGYIETNNTEA 192 (247)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSGGGHH
T ss_pred ----------------------------ChHHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEeeCCCCCcchhh
Confidence 4789999999999999999999999 9999999999999999754
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-23 Score=165.37 Aligned_cols=101 Identities=26% Similarity=0.227 Sum_probs=84.2
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||.... .++|++++++|+.|+|+++|.++|+|+++|+||++||..+ .+.+.
T Consensus 108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~------------------ 169 (273)
T 4fgs_A 108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPA------------------ 169 (273)
T ss_dssp EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTT------------------
T ss_pred EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCC------------------
Confidence 589997532 3889999999999999999999999999999999999988 54432
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMGN 148 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~~ 148 (153)
...|++||+|+..|+|+|+.||.++ |||||+|+||+|+|+|......
T Consensus 170 -------------------------~~~Y~asKaav~~ltr~lA~Ela~~----gIrVN~V~PG~i~T~~~~~~~~ 216 (273)
T 4fgs_A 170 -------------------------FSVYAASKAALRSFARNWILDLKDR----GIRINTLSPGPTETTGLVELAG 216 (273)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHHTTTS----CEEEEEEEECSBCC--------
T ss_pred -------------------------chHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeeCCCCChhHHHhhc
Confidence 4789999999999999999999998 9999999999999999876643
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.3e-23 Score=160.95 Aligned_cols=99 Identities=22% Similarity=0.169 Sum_probs=86.1
Q ss_pred CCCCCCCc------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||+.. ..++|++++++|+.|+|.++|.++|+|++ +|+||++||..+ .+.+.
T Consensus 88 VNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~------------------ 149 (258)
T 4gkb_A 88 VNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGN------------------ 149 (258)
T ss_dssp EECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSS------------------
T ss_pred EECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCC------------------
Confidence 69999752 23789999999999999999999999965 699999999988 54432
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+..|+|+|+.|+.++ |||||+|+||+|+|+|.+..
T Consensus 150 -------------------------~~~Y~asKaav~~ltr~lA~ela~~----gIrVN~V~PG~i~T~~~~~~ 194 (258)
T 4gkb_A 150 -------------------------TSGYCASKGAQLALTREWAVALREH----GVRVNAVIPAEVMTPLYRNW 194 (258)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCCSCC---
T ss_pred -------------------------chHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCCCCChhHhhh
Confidence 4789999999999999999999999 99999999999999998765
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=9.1e-23 Score=158.94 Aligned_cols=98 Identities=20% Similarity=0.214 Sum_probs=86.2
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhc---CCccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLR---RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~---~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||+... .++|++++++|+.|+|+++|.++|+|. .+|+||++||..+ ...+.
T Consensus 91 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~--------------- 155 (255)
T 4g81_D 91 INNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPT--------------- 155 (255)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTT---------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCC---------------
Confidence 699998532 288999999999999999999999993 3589999999988 44332
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++.+|+|+|+.||.++ |||||+|+||+|+|+|...
T Consensus 156 ----------------------------~~~Y~asKaal~~ltr~lA~ela~~----gIrVN~V~PG~i~T~~~~~ 199 (255)
T 4g81_D 156 ----------------------------VAPYTAAKGGIKMLTCSMAAEWAQF----NIQTNAIGPGYILTDMNTA 199 (255)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCGGGHH
T ss_pred ----------------------------chhHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeeCCCCCchhhc
Confidence 4789999999999999999999999 9999999999999998754
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-22 Score=154.96 Aligned_cols=98 Identities=17% Similarity=0.208 Sum_probs=83.5
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||.... .++|++++++|+.|+|+++|.++|.|++ +|+||++||..+ .+.+.
T Consensus 80 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~----------------- 142 (247)
T 3ged_A 80 VNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPD----------------- 142 (247)
T ss_dssp EECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTT-----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCC-----------------
Confidence 699987532 3789999999999999999999999964 699999999988 54432
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+..|+|+|+.|+.+ |||||+|+||+|+|++..++
T Consensus 143 --------------------------~~~Y~asKaal~~ltk~lA~ela~-----~IrVN~I~PG~i~t~~~~~~ 186 (247)
T 3ged_A 143 --------------------------SEAYASAKGGIVALTHALAMSLGP-----DVLVNCIAPGWINVTEQQEF 186 (247)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHTT-----TSEEEEEEECSBCCCC---C
T ss_pred --------------------------CHHHHHHHHHHHHHHHHHHHHHCC-----CCEEEEEecCcCCCCCcHHH
Confidence 478999999999999999999964 79999999999999998655
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-21 Score=152.69 Aligned_cols=98 Identities=18% Similarity=0.171 Sum_probs=84.2
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|+++++|.++|+|++ +|+||++||..+ ...+.
T Consensus 83 VnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~-------------- 148 (261)
T 4h15_A 83 VHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPE-------------- 148 (261)
T ss_dssp EECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------
T ss_pred EECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCC--------------
Confidence 58998632 12789999999999999999999999954 689999999887 44321
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....|++||+|+..|+|+|+.|+.++ |||||+|+||+|+|+|..
T Consensus 149 ----------------------------~~~~Y~asKaal~~lt~~lA~Ela~~----gIrVN~V~PG~i~T~~~~ 192 (261)
T 4h15_A 149 ----------------------------STTAYAAAKAALSTYSKAMSKEVSPK----GVRVVRVSPGWIETEASV 192 (261)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCHHHH
T ss_pred ----------------------------ccHHHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEeCCCcCCcchh
Confidence 13689999999999999999999999 999999999999999753
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.84 E-value=6.7e-21 Score=147.61 Aligned_cols=100 Identities=12% Similarity=0.036 Sum_probs=88.0
Q ss_pred CCCCCCCcc-----------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVPF-----------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~~-----------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||.... .++|+.++++|+.+++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 91 vnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~-------------- 156 (256)
T 4fs3_A 91 YHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQN-------------- 156 (256)
T ss_dssp EECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTT--------------
T ss_pred EeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCccc--------------
Confidence 589986421 1679999999999999999999999999999999999988 44332
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||+++..|+|+|+.||.++ |||||+|+||+|+|+|.+...
T Consensus 157 -----------------------------~~~Y~asKaal~~ltr~lA~Ela~~----gIrVN~V~PG~i~T~~~~~~~ 202 (256)
T 4fs3_A 157 -----------------------------YNVMGVAKASLEANVKYLALDLGPD----NIRVNAISAGPIRTLSAKGVG 202 (256)
T ss_dssp -----------------------------THHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCCCSGGGTTCT
T ss_pred -----------------------------chhhHHHHHHHHHHHHHHHHHhCcc----CeEEEEEecCCCCChhhhhcc
Confidence 4789999999999999999999999 999999999999999987653
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=140.59 Aligned_cols=98 Identities=21% Similarity=0.198 Sum_probs=87.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------------ 148 (255)
T 4eso_A 87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPG------------------ 148 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTT------------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC------------------
Confidence 58999863 34789999999999999999999999988899999999887 43322
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.|+++++.|+.++ ||+||+|+||+|+|++...
T Consensus 149 -------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~ 192 (255)
T 4eso_A 149 -------------------------MSVYSASKAALVSFASVLAAELLPR----GIRVNSVSPGFIDTPTKGV 192 (255)
T ss_dssp -------------------------BHHHHHHHHHHHHHHHHHHHHTGGG----TCEEEEEEECSBCCSSTTC
T ss_pred -------------------------chHHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEecCcccCccccc
Confidence 4789999999999999999999998 9999999999999998764
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-19 Score=139.60 Aligned_cols=97 Identities=24% Similarity=0.242 Sum_probs=85.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-c-ccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-H-LSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~-~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++|+||++||..+ . ..+.
T Consensus 101 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------------- 163 (270)
T 3is3_A 101 VSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPK----------------- 163 (270)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTT-----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCC-----------------
Confidence 69999853 34789999999999999999999999998999999999874 2 2221
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..|+++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 164 --------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~ 206 (270)
T 3is3_A 164 --------------------------HSLYSGSKGAVDSFVRIFSKDCGDK----KITVNAVAPGGTVTDMFH 206 (270)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSTTHH
T ss_pred --------------------------CchhHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeCCccChhhh
Confidence 4789999999999999999999988 999999999999999864
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=6e-19 Score=137.97 Aligned_cols=133 Identities=31% Similarity=0.409 Sum_probs=99.9
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEH 87 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (153)
++|++++++|+.|++.+++.++|.|++ .++||++||..+ ................+.+...+++.....+......
T Consensus 143 ~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 221 (311)
T 3o26_A 143 ELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKE- 221 (311)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHT-
T ss_pred hhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhc-
Confidence 778999999999999999999999965 489999999988 4332222222222244446677777776666665554
Q ss_pred CCccccCCCC--CchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCCCCCC
Q psy16223 88 PRAHVAKGWP--DSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMGNVNI 151 (153)
Q Consensus 88 ~~~~~~~~~~--~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~ 151 (153)
......+|+ ...|++||++++++++++++++. +|+|++|+||+|+|+|.+.....++
T Consensus 222 -~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~------~i~v~~v~PG~v~T~~~~~~~~~~~ 280 (311)
T 3o26_A 222 -NLIETNGWPSFGAAYTTSKACLNAYTRVLANKIP------KFQVNCVCPGLVKTEMNYGIGNYTA 280 (311)
T ss_dssp -TCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCT------TSEEEEECCCSBCSGGGTTCCSBCH
T ss_pred -cccccccCcccchhhHHHHHHHHHHHHHHHhhcC------CceEEEecCCceecCCcCCCCCCCH
Confidence 334444553 36899999999999999999984 5999999999999999887655443
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.80 E-value=4e-20 Score=147.72 Aligned_cols=99 Identities=10% Similarity=0.192 Sum_probs=86.9
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||+.. ..++|++++++|+.|++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 118 VnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~---------------- 181 (329)
T 3lt0_A 118 VHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPG---------------- 181 (329)
T ss_dssp EECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTT----------------
T ss_pred EECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeCccccCCCCc----------------
Confidence 68999631 23789999999999999999999999988899999999988 44332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCc-hhHHhHHHHHHHHHHHHHHhcc-ccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDS-AYAVSKIGVNLLTRIYQKKFDC-ELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~l~~e~~~-~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
.. .|++||+++.+|+++|+.|+.+ . ||+||+|+||+|+|+|.+..
T Consensus 182 ---------------------------~~~~Y~asKaal~~~~~~la~el~~~~----gI~vn~v~PG~v~T~~~~~~ 228 (329)
T 3lt0_A 182 ---------------------------YGGGMSSAKAALESDTRVLAYHLGRNY----NIRINTISAGPLKSRAATAI 228 (329)
T ss_dssp ---------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCCCCHHHHTC
T ss_pred ---------------------------chHHHHHHHHHHHHHHHHHHHHhCCcc----CeEEEEEecceeechhHhhh
Confidence 33 8999999999999999999988 8 89999999999999998765
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.1e-20 Score=142.53 Aligned_cols=98 Identities=30% Similarity=0.359 Sum_probs=81.8
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||.... .++|++++++|+.|++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 110 vnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------------ 171 (267)
T 3u5t_A 110 VNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPS------------------ 171 (267)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTT------------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCC------------------
Confidence 689997532 3789999999999999999999999988899999999877 43322
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 172 -------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~ 215 (267)
T 3u5t_A 172 -------------------------YGIYAAAKAGVEAMTHVLSKELRGR----DITVNAVAPGPTATDLFLE 215 (267)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHHTTTS----CCEEEEEEECCBC------
T ss_pred -------------------------chHHHHHHHHHHHHHHHHHHHhhhh----CCEEEEEEECCCcCccccc
Confidence 4789999999999999999999988 9999999999999999754
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-19 Score=138.81 Aligned_cols=99 Identities=21% Similarity=0.323 Sum_probs=86.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .|+||++||..+ ...+.
T Consensus 88 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------------- 151 (248)
T 3op4_A 88 VNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAG---------------- 151 (248)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC----------------
Confidence 58999753 23789999999999999999999999953 689999999887 44322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.|+++++.|+.++ ||+||+|+||+|+|+|.+..
T Consensus 152 ---------------------------~~~Y~asK~a~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~ 196 (248)
T 3op4_A 152 ---------------------------QANYAAAKAGVIGFTKSMAREVASR----GVTVNTVAPGFIETDMTKAL 196 (248)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBSSTTTTTS
T ss_pred ---------------------------ChHHHHHHHHHHHHHHHHHHHHHHh----CeEEEEEeeCCCCCchhhhc
Confidence 4789999999999999999999998 99999999999999998754
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3e-19 Score=140.70 Aligned_cols=99 Identities=12% Similarity=0.097 Sum_probs=83.4
Q ss_pred CCCCCCCc-----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-----------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 114 VnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~-------------- 179 (293)
T 3grk_A 114 VHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPN-------------- 179 (293)
T ss_dssp EECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTT--------------
T ss_pred EECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCc--------------
Confidence 68999764 13789999999999999999999999998999999999887 43322
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|....
T Consensus 180 -----------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~ 224 (293)
T 3grk_A 180 -----------------------------YNVMGVAKAALEASVKYLAVDLGPQ----NIRVNAISAGPIKTLAASGI 224 (293)
T ss_dssp -----------------------------TTHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCCCC------
T ss_pred -----------------------------hHHHHHHHHHHHHHHHHHHHHHhHh----CCEEEEEecCCCcchhhhcc
Confidence 4789999999999999999999998 99999999999999997654
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-19 Score=140.75 Aligned_cols=97 Identities=25% Similarity=0.283 Sum_probs=85.1
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ +|+||++||..+ ...+.
T Consensus 106 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 170 (277)
T 3tsc_A 106 VANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPF--------------- 170 (277)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSS---------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCC---------------
Confidence 689998532 3789999999999999999999999964 589999999888 44322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 171 ----------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~ 213 (277)
T 3tsc_A 171 ----------------------------MIHYTASKHAVTGLARAFAAELGKH----SIRVNSVHPGPVNTPMGS 213 (277)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBSSGGGS
T ss_pred ----------------------------chhhHHHHHHHHHHHHHHHHHhCcc----CeEEEEEEeCCCcCCccc
Confidence 4789999999999999999999988 999999999999999865
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.3e-19 Score=140.18 Aligned_cols=98 Identities=22% Similarity=0.174 Sum_probs=85.5
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +|+||++||..+ ...+.
T Consensus 109 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 174 (286)
T 3uve_A 109 VANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPH-------------- 174 (286)
T ss_dssp EECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--------------
T ss_pred EECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCCCC--------------
Confidence 58999742 23789999999999999999999999954 589999999888 44332
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.|+++|+.|+.+. ||+||+|+||+|+|+|...
T Consensus 175 -----------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~ 218 (286)
T 3uve_A 175 -----------------------------TGHYVAAKHGVVGLMRAFGVELGQH----MIRVNSVHPTHVKTPMLHN 218 (286)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBSSTTTSS
T ss_pred -----------------------------ccHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCcccCCcccc
Confidence 4789999999999999999999998 9999999999999999763
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4e-19 Score=140.01 Aligned_cols=99 Identities=13% Similarity=0.078 Sum_probs=87.4
Q ss_pred CCCCCCCcc-----------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVPF-----------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~~-----------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||.... .++|++++++|+.|++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 113 VnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~-------------- 178 (296)
T 3k31_A 113 VHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPH-------------- 178 (296)
T ss_dssp EECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT--------------
T ss_pred EECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCC--------------
Confidence 689998632 2789999999999999999999999988999999999887 43322
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|....
T Consensus 179 -----------------------------~~~Y~asKaal~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~~~~ 223 (296)
T 3k31_A 179 -----------------------------YNVMGVCKAALEASVKYLAVDLGKQ----QIRVNAISAGPVRTLASSGI 223 (296)
T ss_dssp -----------------------------TTHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECCCCCSSCCSC
T ss_pred -----------------------------chhhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEEECCCcCchhhcc
Confidence 4789999999999999999999988 99999999999999997654
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-19 Score=138.31 Aligned_cols=100 Identities=16% Similarity=0.114 Sum_probs=83.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 82 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------------- 144 (235)
T 3l6e_A 82 LHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKAN----------------- 144 (235)
T ss_dssp EEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSS-----------------
T ss_pred EECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCC-----------------
Confidence 58999753 33789999999999999999999999965 579999999887 44322
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||+++++|+++++.|+.+. ||+|++|+||+|+|+|.....
T Consensus 145 --------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~~ 190 (235)
T 3l6e_A 145 --------------------------ESLYCASKWGMRGFLESLRAELKDS----PLRLVNLYPSGIRSEFWDNTD 190 (235)
T ss_dssp --------------------------HHHHHHHHHHHHHHHHHHHHHTTTS----SEEEEEEEEEEECCCC-----
T ss_pred --------------------------CcHHHHHHHHHHHHHHHHHHHhhcc----CCEEEEEeCCCccCcchhccC
Confidence 3689999999999999999999988 999999999999999976543
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.1e-19 Score=139.25 Aligned_cols=98 Identities=27% Similarity=0.254 Sum_probs=85.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 110 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 174 (280)
T 3pgx_A 110 VANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPG--------------- 174 (280)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT---------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCC---------------
Confidence 58999863 34789999999999999999999999954 589999999887 44322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 175 ----------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~ 218 (280)
T 3pgx_A 175 ----------------------------NGHYSASKHGLTALTNTLAIELGEY----GIRVNSIHPYSVETPMIEP 218 (280)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSTTCCH
T ss_pred ----------------------------chhHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcccCcccch
Confidence 4789999999999999999999998 9999999999999999753
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-19 Score=136.82 Aligned_cols=100 Identities=24% Similarity=0.270 Sum_probs=87.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 96 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~------------------ 157 (255)
T 3icc_A 96 INNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD------------------ 157 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTT------------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCC------------------
Confidence 58998752 23789999999999999999999999988899999999887 44322
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||++++.|+++++.|+.+. ||+|++|+||+|+|+|.+...
T Consensus 158 -------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~~ 203 (255)
T 3icc_A 158 -------------------------FIAYSMTKGAINTMTFTLAKQLGAR----GITVNAILPGFVKTDMNAELL 203 (255)
T ss_dssp -------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCCSSSTTTT
T ss_pred -------------------------cchhHHhHHHHHHHHHHHHHHHHhc----CeEEEEEEEeeecccchhhhc
Confidence 4789999999999999999999988 999999999999999987653
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.7e-19 Score=137.86 Aligned_cols=99 Identities=19% Similarity=0.156 Sum_probs=83.6
Q ss_pred CCCCCCC-----------ccHHHHHHHHhhhhhHHHHHHHHHhhhhcC----------CccEEEecCCcc-cccccccHH
Q psy16223 1 MNRASTV-----------PFAIQAEKTILTNYLGLVRTCVFLFPLLRR----------HARVVNLSSSAG-HLSQITNLE 58 (153)
Q Consensus 1 innag~~-----------~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~----------~g~iv~~sS~~~-~~~~~~~~~ 58 (153)
|||||.. ...++|++++++|+.|++.+++.++|.|++ +|+||++||..+ ...+.
T Consensus 84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---- 159 (257)
T 3tl3_A 84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIG---- 159 (257)
T ss_dssp EECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHH----
T ss_pred EECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCC----
Confidence 5899874 234789999999999999999999999965 479999999988 44322
Q ss_pred HHhhhhccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc
Q psy16223 59 LKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV 138 (153)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v 138 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|
T Consensus 160 ---------------------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gI~vn~v~PG~v 196 (257)
T 3tl3_A 160 ---------------------------------------QAAYSASKGGVVGMTLPIARDLASH----RIRVMTIAPGLF 196 (257)
T ss_dssp ---------------------------------------HHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSB
T ss_pred ---------------------------------------CccHHHHHHHHHHHHHHHHHHhccc----CcEEEEEEecCc
Confidence 3689999999999999999999998 999999999999
Q ss_pred cCCCCCCC
Q psy16223 139 ATNMSSFM 146 (153)
Q Consensus 139 ~T~~~~~~ 146 (153)
+|+|....
T Consensus 197 ~T~~~~~~ 204 (257)
T 3tl3_A 197 DTPLLASL 204 (257)
T ss_dssp CCTTC---
T ss_pred cChhhhhc
Confidence 99998654
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-19 Score=138.63 Aligned_cols=97 Identities=20% Similarity=0.079 Sum_probs=85.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 75 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------------------ 136 (244)
T 4e4y_A 75 FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPN------------------ 136 (244)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTT------------------
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCC------------------
Confidence 58999752 23789999999999999999999999988899999999887 44322
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++|+.|+.+. ||+||+|+||+|+|+|.+
T Consensus 137 -------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~ 179 (244)
T 4e4y_A 137 -------------------------SFAYTLSKGAIAQMTKSLALDLAKY----QIRVNTVCPGTVDTDLYR 179 (244)
T ss_dssp -------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEESCBCCHHHH
T ss_pred -------------------------CchhHHHHHHHHHHHHHHHHHHHHc----CeEEEEEecCccCchhhH
Confidence 4689999999999999999999988 999999999999999753
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-19 Score=138.58 Aligned_cols=98 Identities=28% Similarity=0.284 Sum_probs=85.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 104 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 167 (281)
T 3s55_A 104 ITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFA---------------- 167 (281)
T ss_dssp EECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTT----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCC----------------
Confidence 58999753 23789999999999999999999999954 589999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 168 ---------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~ 211 (281)
T 3s55_A 168 ---------------------------QASYVSSKWGVIGLTKCAAHDLVGY----GITVNAVAPGNIETPMTHN 211 (281)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEECSBCSTTTSS
T ss_pred ---------------------------CchhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEecCcccCccccc
Confidence 4789999999999999999999988 9999999999999999753
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.6e-19 Score=138.07 Aligned_cols=99 Identities=9% Similarity=-0.037 Sum_probs=77.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ +|+||++||..+ ...+.
T Consensus 88 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 151 (252)
T 3h7a_A 88 IFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSG---------------- 151 (252)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTT----------------
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCC----------------
Confidence 589997532 3789999999999999999999999964 589999999887 44322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEE-EEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVI-NAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v-~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++..|+++++.|+.+. ||+| |+|+||+|+|+|.+..
T Consensus 152 ---------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gi~v~n~v~PG~v~T~~~~~~ 197 (252)
T 3h7a_A 152 ---------------------------FAAFASAKFGLRAVAQSMARELMPK----NIHVAHLIIDSGVDTAWVRER 197 (252)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEEC-----------
T ss_pred ---------------------------CccHHHHHHHHHHHHHHHHHHhhhc----CCEEEEEecCCccCChhhhcc
Confidence 4789999999999999999999998 9999 9999999999998765
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.4e-19 Score=137.38 Aligned_cols=98 Identities=19% Similarity=0.190 Sum_probs=86.2
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cc-cccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HL-SQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~-~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+ .. .+.
T Consensus 114 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~----------------- 176 (271)
T 3v2g_A 114 VNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPG----------------- 176 (271)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTT-----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCC-----------------
Confidence 58999752 23789999999999999999999999998999999999776 32 221
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..|+++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 177 --------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~~~ 220 (271)
T 3v2g_A 177 --------------------------ISLYSASKAALAGLTKGLARDLGPR----GITVNIVHPGSTDTDMNPA 220 (271)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSSSSCS
T ss_pred --------------------------chHHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEecCCCcCCcccc
Confidence 4789999999999999999999998 9999999999999999764
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.2e-19 Score=139.01 Aligned_cols=98 Identities=23% Similarity=0.156 Sum_probs=85.0
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|++.+++.++|.|.+ +|+||++||..+ ...+.
T Consensus 122 v~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~-------------- 187 (299)
T 3t7c_A 122 LANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAEN-------------- 187 (299)
T ss_dssp EECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTT--------------
T ss_pred EECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC--------------
Confidence 58998642 23789999999999999999999999843 589999999887 44322
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..|+++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 188 -----------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~ 231 (299)
T 3t7c_A 188 -----------------------------IGNYIASKHGLHGLMRTMALELGPR----NIRVNIVCPSSVATPMLLN 231 (299)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESCBSSTTTSS
T ss_pred -----------------------------cchHHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCCccCccccc
Confidence 4789999999999999999999998 9999999999999999753
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=133.62 Aligned_cols=141 Identities=36% Similarity=0.593 Sum_probs=109.5
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCccc-ccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGH-LSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||.... .++++.++++|+.|++.+++.++|.|+++++||++||..+. ..+...+.....+....+.++.
T Consensus 87 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~ 166 (276)
T 1wma_A 87 VNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEE 166 (276)
T ss_dssp EECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHH
T ss_pred EECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccchhh
Confidence 588887532 47899999999999999999999999878899999998763 2222234445555666677887
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhcc----ccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC----ELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~----~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
+......|...... ......+++...|++||+++..+++.++.++.. . ||+|++|+||+|+|+|.....
T Consensus 167 ~~~~~~~~~~~~~~--~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~----~i~v~~v~PG~v~t~~~~~~~ 239 (276)
T 1wma_A 167 LVGLMNKFVEDTKK--GVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGD----KILLNACCPGWVRTDMAGPKA 239 (276)
T ss_dssp HHHHHHHHHHHHHT--TCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTS----CCEEEEEECCSBCSTTTCTTC
T ss_pred hhhhhhhhhhhhcc--cccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCC----ceEEEEecCCccccCcCCccc
Confidence 77777777665444 233334555579999999999999999999987 5 899999999999999987543
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.5e-19 Score=137.75 Aligned_cols=99 Identities=20% Similarity=0.188 Sum_probs=85.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------------- 150 (258)
T 3oid_A 87 VNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLEN---------------- 150 (258)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCC----------------
Confidence 58998642 23789999999999999999999999976 489999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|.+..
T Consensus 151 ---------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~ 195 (258)
T 3oid_A 151 ---------------------------YTTVGVSKAALEALTRYLAVELSPK----QIIVNAVSGGAIDTDALKHF 195 (258)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEECCBCSGGGGGC
T ss_pred ---------------------------cHHHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEeeCCCcChhhhhc
Confidence 4789999999999999999999988 99999999999999987654
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.5e-19 Score=136.12 Aligned_cols=99 Identities=25% Similarity=0.235 Sum_probs=82.8
Q ss_pred CCCCCCCc-----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--------CccEEEecCCcc-cccccccHHHH
Q psy16223 1 MNRASTVP-----------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--------HARVVNLSSSAG-HLSQITNLELK 60 (153)
Q Consensus 1 innag~~~-----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--------~g~iv~~sS~~~-~~~~~~~~~~~ 60 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 86 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 159 (257)
T 3tpc_A 86 VNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIG------ 159 (257)
T ss_dssp EECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT------
T ss_pred EECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCC------
Confidence 58999752 13789999999999999999999999965 479999999887 44322
Q ss_pred hhhhccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccC
Q psy16223 61 KRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVAT 140 (153)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T 140 (153)
...|++||+++..|+++++.|+.+. ||+||+|+||+|+|
T Consensus 160 -------------------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~t 198 (257)
T 3tpc_A 160 -------------------------------------QAAYAASKGGVAALTLPAARELARF----GIRVVTIAPGIFDT 198 (257)
T ss_dssp -------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBSC
T ss_pred -------------------------------------CcchHHHHHHHHHHHHHHHHHHHHc----CeEEEEEEeCCCCC
Confidence 4789999999999999999999998 99999999999999
Q ss_pred CCCCCC
Q psy16223 141 NMSSFM 146 (153)
Q Consensus 141 ~~~~~~ 146 (153)
+|....
T Consensus 199 ~~~~~~ 204 (257)
T 3tpc_A 199 PMMAGM 204 (257)
T ss_dssp C-----
T ss_pred hhhccC
Confidence 997654
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.5e-19 Score=139.46 Aligned_cols=96 Identities=25% Similarity=0.323 Sum_probs=84.3
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .|+||++||..+ ...+.
T Consensus 120 VnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~--------------- 184 (287)
T 3rku_A 120 VNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPT--------------- 184 (287)
T ss_dssp EECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT---------------
T ss_pred EECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCC---------------
Confidence 58999753 24789999999999999999999999954 689999999888 44322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|.
T Consensus 185 ----------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~ 226 (287)
T 3rku_A 185 ----------------------------GSIYCASKFAVGAFTDSLRKELINT----KIRVILIAPGLVETEFS 226 (287)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHTTTS----SCEEEEEEESCEESSHH
T ss_pred ----------------------------CchHHHHHHHHHHHHHHHHHHhhhc----CCEEEEEeCCcCcCccc
Confidence 4789999999999999999999988 99999999999999984
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.4e-19 Score=137.99 Aligned_cols=99 Identities=20% Similarity=0.266 Sum_probs=86.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .|+||++||..+ ...+.
T Consensus 92 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~---------------- 155 (266)
T 3p19_A 92 VNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPD---------------- 155 (266)
T ss_dssp EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT----------------
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCC----------------
Confidence 58999752 23789999999999999999999999964 589999999887 44322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++..|+++++.|+.+. ||+||+|+||+|+|+|....
T Consensus 156 ---------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~ 200 (266)
T 3p19_A 156 ---------------------------HAAYCGTKFAVHAISENVREEVAAS----NVRVMTIAPSAVKTELLSHT 200 (266)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBSSSGGGGC
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHhccc----CcEEEEEeeCccccchhhcc
Confidence 4789999999999999999999988 99999999999999997654
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.7e-19 Score=138.03 Aligned_cols=101 Identities=23% Similarity=0.238 Sum_probs=85.7
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 110 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~--------------- 174 (283)
T 3v8b_A 110 VANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTT--------------- 174 (283)
T ss_dssp EECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCS---------------
T ss_pred EECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCC---------------
Confidence 58999742 23789999999999999999999999964 589999999887 32111
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
-....|++||++++.++++++.|+.+. ||+||+|+||+|+|+|....
T Consensus 175 --------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~ 221 (283)
T 3v8b_A 175 --------------------------PGATAYTATKAAQVAIVQQLALELGKH----HIRVNAVCPGAIETNISDNT 221 (283)
T ss_dssp --------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTT----TEEEEEEEECSBSSCTTCCT
T ss_pred --------------------------CCchHHHHHHHHHHHHHHHHHHHhCcc----CcEEEEEEeCCCcCCccccc
Confidence 014789999999999999999999988 99999999999999998754
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.6e-19 Score=135.70 Aligned_cols=98 Identities=23% Similarity=0.215 Sum_probs=84.7
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +|+||++||..+ ...+.
T Consensus 83 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~---------------- 146 (254)
T 3kzv_A 83 VANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSS---------------- 146 (254)
T ss_dssp EEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCC----------------
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCC----------------
Confidence 58999742 23789999999999999999999999965 699999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||++++.|+++++.|+ . ||+||+|+||+|+|+|.....
T Consensus 147 ---------------------------~~~Y~asK~a~~~~~~~la~e~--~----~i~vn~v~PG~v~t~~~~~~~ 190 (254)
T 3kzv_A 147 ---------------------------WGAYGSSKAALNHFAMTLANEE--R----QVKAIAVAPGIVDTDMQVNIR 190 (254)
T ss_dssp ---------------------------SHHHHHHHHHHHHHHHHHHHHC--T----TSEEEEEECSSCCCCCSCCCC
T ss_pred ---------------------------cchHHHHHHHHHHHHHHHHhhc--c----CcEEEEEeCCcccchhHHHhh
Confidence 4789999999999999999998 4 799999999999999987653
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.78 E-value=7e-20 Score=142.00 Aligned_cols=98 Identities=17% Similarity=0.091 Sum_probs=80.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 96 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~------------------ 157 (262)
T 3ksu_A 96 INTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF------------------ 157 (262)
T ss_dssp EECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC------------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC------------------
Confidence 58999752 23789999999999999999999999988899999999877 33221
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 158 -------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~ 201 (262)
T 3ksu_A 158 -------------------------YSTYAGNKAPVEHYTRAASKELMKQ----QISVNAIAPGPMDTSFFYG 201 (262)
T ss_dssp -------------------------CCC-----CHHHHHHHHHHHHTTTT----TCEEEEEEECCCCTHHHHT
T ss_pred -------------------------CchhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEeeCCCcCccccc
Confidence 4789999999999999999999988 9999999999999998644
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.5e-19 Score=137.91 Aligned_cols=101 Identities=27% Similarity=0.273 Sum_probs=85.0
Q ss_pred CCCCCCCc---cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccChHHH
Q psy16223 1 MNRASTVP---FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQL 73 (153)
Q Consensus 1 innag~~~---~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 73 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ .......
T Consensus 107 v~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~----------------- 169 (278)
T 3sx2_A 107 VANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSAD----------------- 169 (278)
T ss_dssp EECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSS-----------------
T ss_pred EECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCC-----------------
Confidence 68999863 34889999999999999999999999954 589999999887 3321000
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 74 TDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.....|++||+++..|+++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 170 ----------------------~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~ 214 (278)
T 3sx2_A 170 ----------------------PGSVGYVAAKHGVVGLMRVYANLLAGQ----MIRVNSIHPSGVETPMIN 214 (278)
T ss_dssp ----------------------HHHHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESCBSSTTTS
T ss_pred ----------------------CCchHhHHHHHHHHHHHHHHHHHHhcc----CcEEEEEecCCccCccch
Confidence 003679999999999999999999988 999999999999999976
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.5e-19 Score=138.04 Aligned_cols=97 Identities=16% Similarity=0.194 Sum_probs=84.9
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 92 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 155 (265)
T 3lf2_A 92 VNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPH---------------- 155 (265)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTT----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCC----------------
Confidence 589997532 3789999999999999999999999965 589999999887 44322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.|+++++.|+.++ ||+||+|+||+|+|+|..
T Consensus 156 ---------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~~ 198 (265)
T 3lf2_A 156 ---------------------------MVATSAARAGVKNLVRSMAFEFAPK----GVRVNGILIGLVESGQWR 198 (265)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHH
T ss_pred ---------------------------chhhHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeCcCcCchhh
Confidence 4789999999999999999999998 999999999999998754
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.1e-19 Score=135.62 Aligned_cols=99 Identities=25% Similarity=0.343 Sum_probs=86.2
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 150 (246)
T 3osu_A 87 VNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPG---------------- 150 (246)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC----------------
Confidence 58999753 33789999999999999999999999953 689999999887 44322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.++++++.|+.++ ||+||+|+||+|+|+|....
T Consensus 151 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~~ 195 (246)
T 3osu_A 151 ---------------------------QANYVATKAGVIGLTKSAARELASR----GITVNAVAPGFIVSDMTDAL 195 (246)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBGGGCCSCS
T ss_pred ---------------------------ChHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEEECCCcCCccccc
Confidence 4789999999999999999999998 99999999999999998654
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.9e-19 Score=138.94 Aligned_cols=95 Identities=23% Similarity=0.191 Sum_probs=84.6
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 133 v~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~----------------- 195 (294)
T 3r3s_A 133 ALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPH----------------- 195 (294)
T ss_dssp EECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTT-----------------
T ss_pred EECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCC-----------------
Confidence 58998742 23789999999999999999999999998899999999887 43322
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|
T Consensus 196 --------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~ 236 (294)
T 3r3s_A 196 --------------------------LLDYAATKAAILNYSRGLAKQVAEK----GIRVNIVAPGPIWTAL 236 (294)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSHH
T ss_pred --------------------------chHHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCcCcccc
Confidence 4789999999999999999999998 9999999999999987
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7e-19 Score=138.15 Aligned_cols=98 Identities=11% Similarity=0.129 Sum_probs=84.5
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 124 vnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~---------------- 187 (297)
T 1d7o_A 124 VHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIPG---------------- 187 (297)
T ss_dssp EECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTT----------------
T ss_pred EECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccCCCC----------------
Confidence 58998532 23789999999999999999999999987899999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCC-chhHHhHHHHHHHHHHHHHHhcc-ccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDC-ELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~l~~e~~~-~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
. ..|++||++++.|+++++.|+.+ . ||+||+|+||+|+|+|...
T Consensus 188 ---------------------------~~~~Y~asKaa~~~~~~~la~e~~~~~----gi~vn~v~PG~v~T~~~~~ 233 (297)
T 1d7o_A 188 ---------------------------YGGGMSSAKAALESDTRVLAFEAGRKQ----NIRVNTISAGPLGSRAAKA 233 (297)
T ss_dssp ---------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCCBCCCSSC
T ss_pred ---------------------------cchHHHHHHHHHHHHHHHHHHHhCccc----CcEEEEEeccccccchhhh
Confidence 2 47999999999999999999984 7 8999999999999999765
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.1e-19 Score=138.10 Aligned_cols=100 Identities=20% Similarity=0.175 Sum_probs=80.7
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC----CccEEEecCCcc-cccccccHHHHhhhhccc
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR----HARVVNLSSSAG-HLSQITNLELKKRLMEDC 67 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~ 67 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +|+||++||..+ ...+.
T Consensus 107 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~------------- 173 (272)
T 4dyv_A 107 FNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPY------------- 173 (272)
T ss_dssp EECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTT-------------
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCC-------------
Confidence 58999742 23789999999999999999999999964 479999999988 44322
Q ss_pred cChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||++++.|+++++.|+... ||+||+|+||+|+|+|.+...
T Consensus 174 ------------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~~ 219 (272)
T 4dyv_A 174 ------------------------------SAPYTATKHAITGLTKSTSLDGRVH----DIACGQIDIGNADTPMAQKMK 219 (272)
T ss_dssp ------------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEEEECC--------
T ss_pred ------------------------------chHHHHHHHHHHHHHHHHHHHhCcc----CEEEEEEEECcccChhhhhhc
Confidence 4789999999999999999999988 999999999999999987653
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.3e-19 Score=138.15 Aligned_cols=109 Identities=19% Similarity=0.227 Sum_probs=86.4
Q ss_pred CCCCCCCc-----cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHH
Q psy16223 1 MNRASTVP-----FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLT 74 (153)
Q Consensus 1 innag~~~-----~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+ ......+ ..+..
T Consensus 104 v~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~-----------~~~~~-- 170 (287)
T 3pxx_A 104 VANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPP-----------GAGGP-- 170 (287)
T ss_dssp EECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC------------------
T ss_pred EECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccc-----------ccccc--
Confidence 58999863 24789999999999999999999999988899999999877 3211000 00000
Q ss_pred HHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 75 DMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
.......|++||++++.++++++.|+.++ ||+||+|+||+|+|+|...
T Consensus 171 -------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~ 218 (287)
T 3pxx_A 171 -------------------QGPGGAGYSYAKQLVDSYTLQLAAQLAPQ----SIRANVIHPTNVNTDMLNS 218 (287)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEESSBSSTTTSS
T ss_pred -------------------CCCccchHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEecCccccccccc
Confidence 00013689999999999999999999998 9999999999999999863
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-18 Score=134.27 Aligned_cols=99 Identities=11% Similarity=0.055 Sum_probs=87.3
Q ss_pred CCCCCCCc-----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-----------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 92 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 157 (266)
T 3oig_A 92 AHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPN-------------- 157 (266)
T ss_dssp EECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT--------------
T ss_pred EEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCC--------------
Confidence 58888753 23789999999999999999999999998899999999887 44322
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.|+++++.|+.+. ||+|++|+||+|+|+|....
T Consensus 158 -----------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~ 202 (266)
T 3oig_A 158 -----------------------------YNVMGVAKASLDASVKYLAADLGKE----NIRVNSISAGPIRTLSAKGI 202 (266)
T ss_dssp -----------------------------THHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCCCSGGGTTC
T ss_pred -----------------------------cchhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEecCcccccccccc
Confidence 4689999999999999999999988 99999999999999987764
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-18 Score=133.33 Aligned_cols=96 Identities=13% Similarity=0.098 Sum_probs=84.2
Q ss_pred CCCCCCCcc----------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccc
Q psy16223 1 MNRASTVPF----------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDC 67 (153)
Q Consensus 1 innag~~~~----------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~ 67 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------- 143 (244)
T 1zmo_A 77 VSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAY------------- 143 (244)
T ss_dssp EECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT-------------
T ss_pred EECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCC-------------
Confidence 589987533 3789999999999999999999999954 489999999887 43322
Q ss_pred cChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|.
T Consensus 144 ------------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~ 185 (244)
T 1zmo_A 144 ------------------------------NPLYGPARAATVALVESAAKTLSRD----GILLYAIGPNFFNNPTY 185 (244)
T ss_dssp ------------------------------CTTHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBCBTTT
T ss_pred ------------------------------chHHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEeeCCCcCCcc
Confidence 4789999999999999999999988 99999999999999997
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=9.8e-19 Score=134.81 Aligned_cols=99 Identities=13% Similarity=0.105 Sum_probs=82.6
Q ss_pred CCCCCCCc------------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccc
Q psy16223 1 MNRASTVP------------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDC 67 (153)
Q Consensus 1 innag~~~------------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~ 67 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 97 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 163 (271)
T 3ek2_A 97 VHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPN------------- 163 (271)
T ss_dssp EECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-------------
T ss_pred EECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCC-------------
Confidence 58998753 23789999999999999999999999998899999999887 43322
Q ss_pred cChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++..|+++++.|+.+. ||+|++|+||+|+|+|....
T Consensus 164 ------------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~ 208 (271)
T 3ek2_A 164 ------------------------------YNTMGLAKAALEASVRYLAVSLGAK----GVRVNAISAGPIKTLAASGI 208 (271)
T ss_dssp ------------------------------TTHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCC-----CCC
T ss_pred ------------------------------ccchhHHHHHHHHHHHHHHHHHHhc----CcEEEEEecCcccchhhhcc
Confidence 4789999999999999999999988 99999999999999997654
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=6.5e-19 Score=137.13 Aligned_cols=98 Identities=24% Similarity=0.310 Sum_probs=85.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .|+||++||..+ ...+.
T Consensus 111 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 174 (269)
T 4dmm_A 111 VNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPG---------------- 174 (269)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTT----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC----------------
Confidence 58999863 23789999999999999999999999954 589999999887 44322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 175 ---------------------------~~~Y~asK~a~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~ 218 (269)
T 4dmm_A 175 ---------------------------QANYSAAKAGVIGLTKTVAKELASR----GITVNAVAPGFIATDMTSE 218 (269)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBTTSCSCH
T ss_pred ---------------------------chhHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEEECCCcCccccc
Confidence 4789999999999999999999988 9999999999999999754
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4.2e-19 Score=136.38 Aligned_cols=98 Identities=27% Similarity=0.238 Sum_probs=85.2
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||..+. .++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 85 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 149 (247)
T 3rwb_A 85 VNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPN--------------- 149 (247)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTT---------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCC---------------
Confidence 589997532 3789999999999999999999999964 489999999887 44322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..|+++++.|+.+. ||+||+|+||+|+|++...
T Consensus 150 ----------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~ 193 (247)
T 3rwb_A 150 ----------------------------MAAYVAAKGGVIGFTRALATELGKY----NITANAVTPGLIESDGVKA 193 (247)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHT
T ss_pred ----------------------------chhhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcCcCccccc
Confidence 4789999999999999999999998 9999999999999987654
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.9e-19 Score=136.87 Aligned_cols=96 Identities=24% Similarity=0.263 Sum_probs=84.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 99 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------------- 162 (266)
T 3uxy_A 99 VNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPG---------------- 162 (266)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC----------------
Confidence 58999863 24789999999999999999999999965 689999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+|+|+|.
T Consensus 163 ---------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~ 204 (266)
T 3uxy_A 163 ---------------------------HALYCLTKAALASLTQCMGMDHAPQ----GIRINAVCPNEVNTPML 204 (266)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBCCHHH
T ss_pred ---------------------------ChHHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEeeCCCcchHh
Confidence 4789999999999999999999998 99999999999999975
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=8.6e-19 Score=137.19 Aligned_cols=99 Identities=25% Similarity=0.312 Sum_probs=82.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .|+||++||..+ ...+.
T Consensus 109 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 172 (281)
T 3v2h_A 109 VNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPF---------------- 172 (281)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCC----------------
Confidence 58999752 33789999999999999999999999964 489999999887 44322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+|+|+|....
T Consensus 173 ---------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~~ 217 (281)
T 3v2h_A 173 ---------------------------KSAYVAAKHGIMGLTKTVALEVAES----GVTVNSICPGYVLTPLVEKQ 217 (281)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCC------
T ss_pred ---------------------------chHHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEECCCCcCcchhhh
Confidence 4789999999999999999999998 99999999999999997653
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-18 Score=135.30 Aligned_cols=97 Identities=27% Similarity=0.354 Sum_probs=85.0
Q ss_pred CCCCCCC-c--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTV-P--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~-~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||.. . ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 90 v~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-------------- 155 (271)
T 3tzq_B 90 DNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDM-------------- 155 (271)
T ss_dssp EECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSS--------------
T ss_pred EECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCC--------------
Confidence 5899976 2 23789999999999999999999999954 589999999887 43322
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|++..
T Consensus 156 -----------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~~ 198 (271)
T 3tzq_B 156 -----------------------------STAYACTKAAIETLTRYVATQYGRH----GVRCNAIAPGLVRTPRLE 198 (271)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCTTTC
T ss_pred -----------------------------ChHHHHHHHHHHHHHHHHHHHHhhc----CEEEEEEEeCCCcCcccc
Confidence 4789999999999999999999998 999999999999999876
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=6e-19 Score=138.05 Aligned_cols=99 Identities=16% Similarity=0.216 Sum_probs=77.0
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-----CccEEEecCCcc-cccccccHHHHhhhhc
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-----HARVVNLSSSAG-HLSQITNLELKKRLME 65 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~ 65 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 112 vnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~----------- 180 (280)
T 4da9_A 112 VNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPE----------- 180 (280)
T ss_dssp EEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------C-----------
T ss_pred EECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCC-----------
Confidence 58998731 34789999999999999999999999954 579999999887 44322
Q ss_pred cccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 181 --------------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~ 224 (280)
T 4da9_A 181 --------------------------------RLDYCMSKAGLAAFSQGLALRLAET----GIAVFEVRPGIIRSDMTAA 224 (280)
T ss_dssp --------------------------------CHHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCBCC-----
T ss_pred --------------------------------ccHHHHHHHHHHHHHHHHHHHHHHh----CcEEEEEeecCCcCCchhh
Confidence 4789999999999999999999988 9999999999999999875
Q ss_pred C
Q psy16223 146 M 146 (153)
Q Consensus 146 ~ 146 (153)
.
T Consensus 225 ~ 225 (280)
T 4da9_A 225 V 225 (280)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=8.2e-19 Score=137.43 Aligned_cols=99 Identities=19% Similarity=0.191 Sum_probs=81.6
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC----CccEEEecCCcc-cccccccHHHHhhhhccc
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR----HARVVNLSSSAG-HLSQITNLELKKRLMEDC 67 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~ 67 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +|+||++||..+ ...+.
T Consensus 116 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~------------- 182 (281)
T 4dry_A 116 VNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPN------------- 182 (281)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTT-------------
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCC-------------
Confidence 58999742 23789999999999999999999999964 479999999887 43322
Q ss_pred cChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.++++++.|+... ||+||+|+||+|+|+|....
T Consensus 183 ------------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~ 227 (281)
T 4dry_A 183 ------------------------------SAPYTATKHAITGLTKSTALDGRMH----DIACGQIDIGNAATDMTARM 227 (281)
T ss_dssp ------------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEEECBCC------
T ss_pred ------------------------------ChhHHHHHHHHHHHHHHHHHHhccc----CeEEEEEEECcCcChhhhhh
Confidence 4789999999999999999999988 99999999999999998755
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=9.6e-19 Score=137.54 Aligned_cols=96 Identities=20% Similarity=0.185 Sum_probs=85.1
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 130 vnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------- 192 (291)
T 3ijr_A 130 VNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNET----------------- 192 (291)
T ss_dssp EECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTT-----------------
T ss_pred EECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCC-----------------
Confidence 58998642 33789999999999999999999999998899999999887 43322
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|++||++++.|+++++.|+.++ ||+||+|+||+|+|+|.
T Consensus 193 --------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~ 234 (291)
T 3ijr_A 193 --------------------------LIDYSATKGAIVAFTRSLSQSLVQK----GIRVNGVAPGPIWTPLI 234 (291)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSTHH
T ss_pred --------------------------ChhHHHHHHHHHHHHHHHHHHHhhc----CEEEEEEeeCCCcCCcc
Confidence 4789999999999999999999998 99999999999999985
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.1e-19 Score=137.21 Aligned_cols=95 Identities=23% Similarity=0.298 Sum_probs=83.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .|+||++||..+ ...+.
T Consensus 106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 169 (277)
T 4dqx_A 106 VNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIAD---------------- 169 (277)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCC----------------
Confidence 58999752 23789999999999999999999999976 479999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|
T Consensus 170 ---------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~ 210 (277)
T 4dqx_A 170 ---------------------------RTAYVASKGAISSLTRAMAMDHAKE----GIRVNAVAPGTIDSPY 210 (277)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHH
T ss_pred ---------------------------ChhHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcCcCch
Confidence 4789999999999999999999998 9999999999999998
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.6e-19 Score=135.96 Aligned_cols=97 Identities=26% Similarity=0.268 Sum_probs=84.7
Q ss_pred CCCCCCCc------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 94 v~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------- 156 (256)
T 3gaf_A 94 VNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVR----------------- 156 (256)
T ss_dssp EECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTT-----------------
T ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCC-----------------
Confidence 58998753 24789999999999999999999999964 589999999887 43322
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+|+|++..
T Consensus 157 --------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~ 199 (256)
T 3gaf_A 157 --------------------------MASYGSSKAAVNHLTRNIAFDVGPM----GIRVNAIAPGAIKTDALA 199 (256)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCHHHH
T ss_pred --------------------------chHHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEEEccccCchhh
Confidence 4789999999999999999999998 999999999999999754
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.76 E-value=9.4e-19 Score=136.45 Aligned_cols=97 Identities=23% Similarity=0.234 Sum_probs=84.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .|+||++||..+ ...+.
T Consensus 108 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~---------------- 171 (271)
T 4ibo_A 108 VNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARAT---------------- 171 (271)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT----------------
T ss_pred EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCC----------------
Confidence 58999752 33789999999999999999999999964 589999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..|+++++.|+.+. ||+||+|+||+|+|+|.+
T Consensus 172 ---------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~ 214 (271)
T 4ibo_A 172 ---------------------------VAPYTVAKGGIKMLTRAMAAEWAQY----GIQANAIGPGYMLTDMNQ 214 (271)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSGGGH
T ss_pred ---------------------------chhHHHHHHHHHHHHHHHHHHHhhh----CeEEEEEEeccEeCcchh
Confidence 4789999999999999999999998 999999999999999864
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-18 Score=135.85 Aligned_cols=97 Identities=18% Similarity=0.340 Sum_probs=77.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .|+||++||..+ ...+.
T Consensus 86 VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~---------------- 149 (264)
T 3tfo_A 86 VNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPT---------------- 149 (264)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCC----------------
Confidence 58999753 23789999999999999999999999953 689999999887 44322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++..|+++++.|+ . ||+||+|+||+|+|+|....
T Consensus 150 ---------------------------~~~Y~asKaal~~l~~~la~e~--~----gIrvn~v~PG~v~T~~~~~~ 192 (264)
T 3tfo_A 150 ---------------------------AAVYCATKFAVRAISDGLRQES--T----NIRVTCVNPGVVESELAGTI 192 (264)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHC--S----SEEEEEEEECCC--------
T ss_pred ---------------------------ChhHHHHHHHHHHHHHHHHHhC--C----CCEEEEEecCCCcCcccccc
Confidence 4789999999999999999997 3 79999999999999998654
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-18 Score=136.41 Aligned_cols=97 Identities=23% Similarity=0.201 Sum_probs=84.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 111 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~---------------- 174 (273)
T 3uf0_A 111 VNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRN---------------- 174 (273)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS----------------
T ss_pred EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCC----------------
Confidence 58999863 23789999999999999999999999954 589999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|++..
T Consensus 175 ---------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~ 217 (273)
T 3uf0_A 175 ---------------------------VAAYAASKHAVVGLTRALASEWAGR----GVGVNALAPGYVVTANTA 217 (273)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSGGGH
T ss_pred ---------------------------ChhHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEEeCCCcCCchh
Confidence 4789999999999999999999988 999999999999999864
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-18 Score=134.86 Aligned_cols=99 Identities=20% Similarity=0.255 Sum_probs=80.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCccc-c--cccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGH-L--SQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~-~--~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+. . .+.
T Consensus 95 vnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~-------------- 160 (274)
T 3e03_A 95 VNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGA-------------- 160 (274)
T ss_dssp EECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHH--------------
T ss_pred EECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCC--------------
Confidence 58999752 23789999999999999999999999965 5899999998873 2 111
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCC-cccCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPG-YVATNMSSFM 146 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG-~v~T~~~~~~ 146 (153)
...|++||++++.|+++++.|+.++ ||+||+|+|| +++|+|....
T Consensus 161 -----------------------------~~~Y~asKaal~~l~~~la~e~~~~----gI~vn~v~PG~~v~T~~~~~~ 206 (274)
T 3e03_A 161 -----------------------------HTGYTLAKMGMSLVTLGLAAEFGPQ----GVAINALWPRTVIATDAINML 206 (274)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEECSBCBCC------
T ss_pred -----------------------------CchHHHHHHHHHHHHHHHHHHhhhc----CEEEEEEECCcccccchhhhc
Confidence 3689999999999999999999998 9999999999 6999998544
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-18 Score=131.32 Aligned_cols=100 Identities=22% Similarity=0.152 Sum_probs=79.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------------- 139 (230)
T 3guy_A 77 VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQ----------------- 139 (230)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTT-----------------
T ss_pred EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCC-----------------
Confidence 58998752 23789999999999999999999999976 469999999887 43322
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||+++..|+++++.|+.+. ||+|++|+||+|+|+|.+...
T Consensus 140 --------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~~ 185 (230)
T 3guy_A 140 --------------------------ESTYCAVKWAVKGLIESVRLELKGK----PMKIIAVYPGGMATEFWETSG 185 (230)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHTTTS----SCEEEEEEECCC---------
T ss_pred --------------------------CchhHHHHHHHHHHHHHHHHHHHhc----CeEEEEEECCcccChHHHhcC
Confidence 4789999999999999999999988 999999999999999987654
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.8e-19 Score=135.94 Aligned_cols=99 Identities=15% Similarity=0.132 Sum_probs=82.0
Q ss_pred CCCCCCCc------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 92 vnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------- 154 (250)
T 3nyw_A 92 VNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFAD----------------- 154 (250)
T ss_dssp EECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CC-----------------
T ss_pred EECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCC-----------------
Confidence 58999752 23789999999999999999999999953 589999999887 32211
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++..|+++++.|+.+. ||+||+|+||+|+|+|.+..
T Consensus 155 --------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~ 199 (250)
T 3nyw_A 155 --------------------------GGIYGSTKFALLGLAESLYRELAPL----GIRVTTLCPGWVNTDMAKKA 199 (250)
T ss_dssp --------------------------TTHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBCSHHHHHT
T ss_pred --------------------------CcchHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCcccCchhhhc
Confidence 4789999999999999999999998 99999999999999987644
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.7e-19 Score=136.26 Aligned_cols=97 Identities=20% Similarity=0.168 Sum_probs=84.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 103 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 167 (266)
T 4egf_A 103 VNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPD--------------- 167 (266)
T ss_dssp EEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---------------
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCC---------------
Confidence 58998753 23789999999999999999999999964 579999999887 43322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 168 ----------------------------~~~Y~asK~a~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~ 210 (266)
T 4egf_A 168 ----------------------------HYAYCTSKAGLVMATKVLARELGPH----GIRANSVCPTVVLTEMGQ 210 (266)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESCBCSHHHH
T ss_pred ----------------------------ChHHHHHHHHHHHHHHHHHHHHhhh----CeEEEEEEeCCCcCchhh
Confidence 4789999999999999999999998 999999999999999854
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.76 E-value=8e-19 Score=136.14 Aligned_cols=96 Identities=20% Similarity=0.123 Sum_probs=83.5
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 90 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 153 (267)
T 3t4x_A 90 INNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQE---------------- 153 (267)
T ss_dssp EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCc----------------
Confidence 589997532 3789999999999999999999999954 489999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|++||+++..++++++.|+.+. ||+||+|+||+|+|++.
T Consensus 154 ---------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~ 195 (267)
T 3t4x_A 154 ---------------------------MAHYSATKTMQLSLSRSLAELTTGT----NVTVNTIMPGSTLTEGV 195 (267)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHTTTS----EEEEEEEEECCBCCHHH
T ss_pred ---------------------------chHHHHHHHHHHHHHHHHHHHhCCC----CeEEEEEeCCeecCccH
Confidence 4789999999999999999999988 99999999999999864
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-18 Score=132.84 Aligned_cols=98 Identities=14% Similarity=0.076 Sum_probs=83.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhh-cC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLL-RR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l-~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.| ++ .++||++||..+ ...+.
T Consensus 88 v~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 152 (257)
T 3imf_A 88 INNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPG--------------- 152 (257)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTT---------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCC---------------
Confidence 58999642 237899999999999999999999999 33 589999999887 43322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc-cccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD-CELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++++|+++++.|+. +. ||+||+|+||+|+|++...
T Consensus 153 ----------------------------~~~Y~asKaa~~~l~~~la~e~~~~~----gIrvn~v~PG~v~t~~~~~ 197 (257)
T 3imf_A 153 ----------------------------VIHSAAAKAGVLAMTKTLAVEWGRKY----GIRVNAIAPGPIERTGGAD 197 (257)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCBSSCCCC-
T ss_pred ----------------------------cHHHHHHHHHHHHHHHHHHHHhcccc----CeEEEEEEECCCcCCcchh
Confidence 47899999999999999999997 77 8999999999999998654
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-18 Score=135.59 Aligned_cols=96 Identities=14% Similarity=0.118 Sum_probs=83.6
Q ss_pred CCCCCCCc------------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP------------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~------------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+...+.
T Consensus 92 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~-------------- 157 (269)
T 2h7i_A 92 VHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPA-------------- 157 (269)
T ss_dssp EECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTT--------------
T ss_pred EECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccCc--------------
Confidence 58998754 2378999999999999999999999998889999999976532221
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|++||++++.++++++.|+.++ ||+||+|+||+|+|+|.
T Consensus 158 -----------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~ 199 (269)
T 2h7i_A 158 -----------------------------YNWMTVAKSALESVNRFVAREAGKY----GVRSNLVAAGPIRTLAM 199 (269)
T ss_dssp -----------------------------THHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCHHH
T ss_pred -----------------------------hHHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCcccchhh
Confidence 3689999999999999999999988 99999999999999974
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-18 Score=134.70 Aligned_cols=98 Identities=18% Similarity=0.153 Sum_probs=85.5
Q ss_pred CCCCCCCcc-----------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVPF-----------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~~-----------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||.... .++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 89 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 154 (275)
T 2pd4_A 89 VHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH-------------- 154 (275)
T ss_dssp EECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT--------------
T ss_pred EECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCC--------------
Confidence 589987532 3789999999999999999999999987799999999877 33221
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 155 -----------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~ 198 (275)
T 2pd4_A 155 -----------------------------YNVMGLAKAALESAVRYLAVDLGKH----HIRVNALSAGPIRTLASSG 198 (275)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCTTGGG
T ss_pred -----------------------------chhhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCccccchhhh
Confidence 3689999999999999999999988 9999999999999998654
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-18 Score=132.85 Aligned_cols=98 Identities=26% Similarity=0.331 Sum_probs=84.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 89 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------- 151 (247)
T 2jah_A 89 VNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRN----------------- 151 (247)
T ss_dssp EECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTT-----------------
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCC-----------------
Confidence 58998752 23789999999999999999999999953 589999999887 43322
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..|+++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 152 --------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~ 195 (247)
T 2jah_A 152 --------------------------AAVYQATKFGVNAFSETLRQEVTER----GVRVVVIEPGTTDTELRGH 195 (247)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBSSSGGGG
T ss_pred --------------------------CcHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEECCCCCCcchhc
Confidence 4689999999999999999999988 9999999999999998654
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.6e-19 Score=141.33 Aligned_cols=99 Identities=12% Similarity=0.116 Sum_probs=68.9
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|+|+++|+||++||..+ ...+.
T Consensus 138 VnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~---------------- 201 (319)
T 2ptg_A 138 VHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPG---------------- 201 (319)
T ss_dssp EEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC-----------------------
T ss_pred EECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCc----------------
Confidence 58888541 23789999999999999999999999987899999999887 33322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCC-chhHHhHHHHHHHHHHHHHHhcc-ccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDC-ELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~l~~e~~~-~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
. ..|++||+++..|+++|+.|+.+ . ||+||+|+||+|+|+|....
T Consensus 202 ---------------------------~~~~Y~asKaal~~l~~~la~el~~~~----gIrvn~v~PG~v~T~~~~~~ 248 (319)
T 2ptg_A 202 ---------------------------YGGGMSSAKAALESDCRTLAFEAGRAR----AVRVNCISAGPLKSRAASAI 248 (319)
T ss_dssp --------------------------------------THHHHHHHHHHHHHHH----CCEEEEEEECCCC-------
T ss_pred ---------------------------cchhhHHHHHHHHHHHHHHHHHhcccc----CeeEEEEeeCCccChhhhhc
Confidence 2 47999999999999999999985 7 89999999999999997643
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.1e-19 Score=136.73 Aligned_cols=98 Identities=26% Similarity=0.338 Sum_probs=85.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhc--CCccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLR--RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~--~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|. ++|+||++||..+ ...+.
T Consensus 110 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 173 (270)
T 3ftp_A 110 VNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPG---------------- 173 (270)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC----------------
Confidence 58999753 2378999999999999999999999994 4689999999887 44322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 174 ---------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~ 217 (270)
T 3ftp_A 174 ---------------------------QVNYAAAKAGVAGMTRALAREIGSR----GITVNCVAPGFIDTDMTKG 217 (270)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSHHHHH
T ss_pred ---------------------------chhHHHHHHHHHHHHHHHHHHHhhh----CeEEEEEEeCCCcCcchhh
Confidence 4789999999999999999999998 9999999999999998643
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-18 Score=135.86 Aligned_cols=97 Identities=21% Similarity=0.220 Sum_probs=83.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .|+||++||..+ ...+
T Consensus 114 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~----------------- 176 (275)
T 4imr_A 114 VINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKS----------------- 176 (275)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC-----------------
Confidence 58999742 23789999999999999999999999954 589999999887 3221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 177 --------------------------~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~ 220 (275)
T 4imr_A 177 --------------------------VVTAYAATKAAQHNLIQSQARDFAGD----NVLLNTLAPGLVDTDRNA 220 (275)
T ss_dssp --------------------------TBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBCSHHHH
T ss_pred --------------------------CchhhHHHHHHHHHHHHHHHHHhccc----CcEEEEEEeccccCcccc
Confidence 13579999999999999999999998 999999999999998753
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.75 E-value=2.1e-18 Score=133.09 Aligned_cols=97 Identities=22% Similarity=0.180 Sum_probs=84.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|.+ +++||++||..+ ...+.
T Consensus 87 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 151 (259)
T 4e6p_A 87 VNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEAL--------------- 151 (259)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---------------
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCC---------------
Confidence 58999752 23789999999999999999999999954 589999999887 44322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+|+|++..
T Consensus 152 ----------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~ 194 (259)
T 4e6p_A 152 ----------------------------VAIYCATKAAVISLTQSAGLDLIKH----RINVNAIAPGVVDGEHWD 194 (259)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCSTTHH
T ss_pred ----------------------------ChHHHHHHHHHHHHHHHHHHHhhhc----CCEEEEEEECCCccchhh
Confidence 4789999999999999999999988 999999999999999754
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-18 Score=135.53 Aligned_cols=97 Identities=27% Similarity=0.283 Sum_probs=84.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhc--CCccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLR--RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~--~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+ ++|+||++||..+ ...+.
T Consensus 108 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~---------------- 171 (277)
T 3gvc_A 108 VANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGG---------------- 171 (277)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC----------------
Confidence 58999753 2378999999999999999999999995 3589999999887 44322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+|+|+|.+
T Consensus 172 ---------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~ 214 (277)
T 3gvc_A 172 ---------------------------TGAYGMSKAGIIQLSRITAAELRSS----GIRSNTLLPAFVDTPMQQ 214 (277)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHH
T ss_pred ---------------------------chhHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeeCCccCchHH
Confidence 4789999999999999999999998 999999999999999753
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.5e-18 Score=132.28 Aligned_cols=97 Identities=24% Similarity=0.281 Sum_probs=80.1
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 79 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------- 143 (248)
T 3asu_A 79 VNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG--------------- 143 (248)
T ss_dssp EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT---------------
T ss_pred EECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCC---------------
Confidence 58998752 23789999999999999999999999954 589999999887 43222
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCccc-CCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVA-TNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~-T~~~~ 144 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+|+ |+|..
T Consensus 144 ----------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~gT~~~~ 187 (248)
T 3asu_A 144 ----------------------------GNVYGATKAFVRQFSLNLRTDLHGT----AVRVTDIEPGLVGGTEFSN 187 (248)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHTTTS----CCEEEEEEECSBCC-----
T ss_pred ----------------------------CchHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEeccccccCcchh
Confidence 4689999999999999999999988 9999999999999 99864
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-18 Score=148.98 Aligned_cols=97 Identities=19% Similarity=0.234 Sum_probs=82.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||+.. ..++|+++++||+.|++.++|.++|+|++ +|+||++||..+ .+.+.
T Consensus 400 VnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~---------------- 463 (604)
T 2et6_A 400 VNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFG---------------- 463 (604)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC----------------
Confidence 69999752 23789999999999999999999999953 589999999887 44332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+|+.+|+++|+.|+.++ ||+||+|+||. +|+|...
T Consensus 464 ---------------------------~~~Y~asKaal~~lt~~la~El~~~----gIrVn~v~PG~-~T~m~~~ 506 (604)
T 2et6_A 464 ---------------------------QANYSSSKAGILGLSKTMAIEGAKN----NIKVNIVAPHA-ETAMTLS 506 (604)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECC-CCCC---
T ss_pred ---------------------------ChhHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEcCCC-CCccccc
Confidence 4689999999999999999999998 99999999995 9999764
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.1e-18 Score=134.53 Aligned_cols=86 Identities=13% Similarity=0.034 Sum_probs=77.4
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhhcC--------CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 10 AIQAEKTILTNYLGLVRTCVFLFPLLRR--------HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 10 ~~~~~~~~~vN~~g~~~l~~~~lp~l~~--------~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
.++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 140 ~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~-------------------------- 193 (291)
T 1e7w_A 140 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLG-------------------------- 193 (291)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTT--------------------------
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCCCC--------------------------
Confidence 6789999999999999999999999964 479999999887 43322
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|++||+++..|+++++.|+.+. ||+||+|+||+|+|+|
T Consensus 194 -----------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~ 234 (291)
T 1e7w_A 194 -----------------YTIYTMAKGALEGLTRSAALELAPL----QIRVNGVGPGLSVLVD 234 (291)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBCCGG
T ss_pred -----------------CchhHHHHHHHHHHHHHHHHHHHhc----CeEEEEEeeCCccCCc
Confidence 4789999999999999999999988 9999999999999998
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-18 Score=135.03 Aligned_cols=99 Identities=16% Similarity=0.272 Sum_probs=81.9
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 106 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~---------------- 169 (266)
T 3grp_A 106 VNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPG---------------- 169 (266)
T ss_dssp EECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------C----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCC----------------
Confidence 589997532 3789999999999999999999999954 589999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++..++++++.|+.+. ||+||+|+||+|+|+|....
T Consensus 170 ---------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~~ 214 (266)
T 3grp_A 170 ---------------------------QTNYCAAKAGLIGFSKALAQEIASR----NITVNCIAPGFIKSAMTDKL 214 (266)
T ss_dssp ---------------------------HHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSHHHHTC
T ss_pred ---------------------------chhHHHHHHHHHHHHHHHHHHhhhh----CcEEEEEeeCcCCCchhhcc
Confidence 3689999999999999999999998 99999999999999986543
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.8e-18 Score=132.00 Aligned_cols=99 Identities=15% Similarity=0.107 Sum_probs=77.2
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC------CccEEEecCCcc-cccccccHHHHhhhhc
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR------HARVVNLSSSAG-HLSQITNLELKKRLME 65 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~------~g~iv~~sS~~~-~~~~~~~~~~~~~~~~ 65 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 88 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------- 156 (261)
T 3n74_A 88 VNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPN----------- 156 (261)
T ss_dssp EECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTT-----------
T ss_pred EECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCC-----------
Confidence 58998753 34789999999999999999999999964 467999999887 43322
Q ss_pred cccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.|+++++.|+... ||+|++|+||+++|++...
T Consensus 157 --------------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 200 (261)
T 3n74_A 157 --------------------------------LAWYNATKGWVVSVTKALAIELAPA----KIRVVALNPVAGETPLLTT 200 (261)
T ss_dssp --------------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEEC---------
T ss_pred --------------------------------ccHHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCcccChhhhh
Confidence 3679999999999999999999988 9999999999999999875
Q ss_pred C
Q psy16223 146 M 146 (153)
Q Consensus 146 ~ 146 (153)
+
T Consensus 201 ~ 201 (261)
T 3n74_A 201 F 201 (261)
T ss_dssp -
T ss_pred h
Confidence 4
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-18 Score=134.98 Aligned_cols=97 Identities=23% Similarity=0.276 Sum_probs=84.0
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +|+||++||..+ ...+.
T Consensus 93 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 156 (264)
T 3ucx_A 93 INNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAK---------------- 156 (264)
T ss_dssp EECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTT----------------
T ss_pred EECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCc----------------
Confidence 58998741 12789999999999999999999999965 699999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+|+|+|.+
T Consensus 157 ---------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~ 199 (264)
T 3ucx_A 157 ---------------------------YGAYKMAKSALLAMSQTLATELGEK----GIRVNSVLPGYIWGGTLK 199 (264)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEESSCBSHHHH
T ss_pred ---------------------------cHHHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEecCccccccHH
Confidence 4789999999999999999999988 999999999999998753
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.3e-18 Score=132.29 Aligned_cols=98 Identities=13% Similarity=0.055 Sum_probs=85.2
Q ss_pred CCCCCCCc------------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccc
Q psy16223 1 MNRASTVP------------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDC 67 (153)
Q Consensus 1 innag~~~------------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~ 67 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 92 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 158 (265)
T 1qsg_A 92 VHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN------------- 158 (265)
T ss_dssp EECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-------------
T ss_pred EECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCC-------------
Confidence 58998753 23679999999999999999999999987789999999877 33221
Q ss_pred cChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.++++++.|+.+. ||+|++|+||+|+|++...
T Consensus 159 ------------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 202 (265)
T 1qsg_A 159 ------------------------------YNVMGLAKASLEANVRYMANAMGPE----GVRVNAISAGPIRTLAASG 202 (265)
T ss_dssp ------------------------------TTHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCCCCTTGGG
T ss_pred ------------------------------chHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeCCCccchhhc
Confidence 3689999999999999999999888 9999999999999998654
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-18 Score=137.37 Aligned_cols=96 Identities=26% Similarity=0.324 Sum_probs=84.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +|+||++||..+ ...+.
T Consensus 140 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~--------------- 204 (317)
T 3oec_A 140 VSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPG--------------- 204 (317)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTT---------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCC---------------
Confidence 68999753 23789999999999999999999999943 589999999887 44322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|++||++++.|+++|+.|+.+. ||+||+|+||+|+|+|.
T Consensus 205 ----------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~ 246 (317)
T 3oec_A 205 ----------------------------QSHYAASKHGVQGLMLSLANEVGRH----NIRVNSVNPGAVNTEMA 246 (317)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBSSHHH
T ss_pred ----------------------------CcchHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCcccCccc
Confidence 4789999999999999999999998 99999999999999875
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-18 Score=134.91 Aligned_cols=95 Identities=16% Similarity=0.192 Sum_probs=83.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|.+ +++||++||..+ ...+.
T Consensus 110 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 173 (277)
T 4fc7_A 110 INCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQAL---------------- 173 (277)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTT----------------
T ss_pred EECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC----------------
Confidence 58998642 23789999999999999999999999854 689999999887 44322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|++||++++.|+++++.|+.++ ||+||+|+||+|+|++
T Consensus 174 ---------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~ 214 (277)
T 4fc7_A 174 ---------------------------QVHAGSAKAAVDAMTRHLAVEWGPQ----NIRVNSLAPGPISGTE 214 (277)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBSSSH
T ss_pred ---------------------------cHHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEECCEecch
Confidence 4789999999999999999999998 9999999999999985
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-18 Score=138.32 Aligned_cols=98 Identities=14% Similarity=0.099 Sum_probs=83.4
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 125 VnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~---------------- 188 (315)
T 2o2s_A 125 VHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVPG---------------- 188 (315)
T ss_dssp EECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCCTT----------------
T ss_pred EECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccCCC----------------
Confidence 58998642 12789999999999999999999999987899999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhcc-ccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC-ELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~-~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
+ ...|++||+++..|+++|+.|+.+ . ||+||+|+||+|+|+|..
T Consensus 189 -------------------------~-~~~Y~asKaal~~l~~~la~el~~~~----gIrvn~v~PG~v~T~~~~ 233 (315)
T 2o2s_A 189 -------------------------Y-GGGMSSAKAALESDTRTLAWEAGQKY----GVRVNAISAGPLKSRAAS 233 (315)
T ss_dssp -------------------------C-CTTHHHHHHHHHHHHHHHHHHHHHHT----CCEEEEEEECCCCCHHHH
T ss_pred -------------------------c-cHHHHHHHHHHHHHHHHHHHHhCccc----CeEEEEEecccccchhhh
Confidence 1 147999999999999999999974 7 899999999999999754
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.75 E-value=3e-18 Score=134.27 Aligned_cols=100 Identities=21% Similarity=0.182 Sum_probs=84.8
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +|+||++||..+...+.
T Consensus 90 vnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------- 153 (280)
T 3tox_A 90 FNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGF---------------- 153 (280)
T ss_dssp EECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCC----------------
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCC----------------
Confidence 58999652 23789999999999999999999999965 58999999988742111
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
.....|++||++++.|+++++.|+.+. ||+||+|+||+|+|++...
T Consensus 154 -------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~~~ 199 (280)
T 3tox_A 154 -------------------------AGVAPYAASKAGLIGLVQALAVELGAR----GIRVNALLPGGTDTPANFA 199 (280)
T ss_dssp -------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECSBSSTTSGG
T ss_pred -------------------------CCchhHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEECCCCCchhhh
Confidence 014789999999999999999999988 9999999999999998754
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.8e-18 Score=131.91 Aligned_cols=98 Identities=17% Similarity=0.174 Sum_probs=84.0
Q ss_pred CCCCCCCcc-----------HHHHHHHHhhhhhHHHHHHHHHhhhhc-CCccEEEecCCcc-cccccccHHHHhhhhccc
Q psy16223 1 MNRASTVPF-----------AIQAEKTILTNYLGLVRTCVFLFPLLR-RHARVVNLSSSAG-HLSQITNLELKKRLMEDC 67 (153)
Q Consensus 1 innag~~~~-----------~~~~~~~~~vN~~g~~~l~~~~lp~l~-~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~ 67 (153)
|||||.... .++|++++++|+.|++.+++.++|.|+ ++++||++||..+ ...+.
T Consensus 104 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 170 (285)
T 2p91_A 104 VHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPH------------- 170 (285)
T ss_dssp EECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTT-------------
T ss_pred EECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCC-------------
Confidence 589987532 378999999999999999999999997 4689999999877 33222
Q ss_pred cChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+|+|++...
T Consensus 171 ------------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 214 (285)
T 2p91_A 171 ------------------------------YNVMGIAKAALESTVRYLAYDIAKH----GHRINAISAGPVKTLAAYS 214 (285)
T ss_dssp ------------------------------TTHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCSCC--
T ss_pred ------------------------------ccHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEEeCcccCchhhc
Confidence 3689999999999999999999988 9999999999999998754
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.5e-18 Score=131.83 Aligned_cols=98 Identities=22% Similarity=0.303 Sum_probs=81.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 88 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 151 (260)
T 1x1t_A 88 VNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN---------------- 151 (260)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCC----------------
Confidence 58998753 23789999999999999999999999964 489999999887 43222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 152 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 195 (260)
T 1x1t_A 152 ---------------------------KSAYVAAKHGVVGFTKVTALETAGQ----GITANAICPGWVRTPLVEK 195 (260)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCBCC-----
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHhccC----CEEEEEEeecCccCchHHH
Confidence 4789999999999999999999988 9999999999999999764
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3e-18 Score=131.57 Aligned_cols=97 Identities=23% Similarity=0.220 Sum_probs=79.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 150 (249)
T 2ew8_A 87 VNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA---------------- 150 (249)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC----------------
Confidence 58999753 23789999999999999999999999964 589999999887 33222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..++++++.|+.+. ||+||+|+||+|+|++..
T Consensus 151 ---------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~ 193 (249)
T 2ew8_A 151 ---------------------------YTHYISTKAANIGFTRALASDLGKD----GITVNAIAPSLVRTATTE 193 (249)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCC------
T ss_pred ---------------------------chhHHHHHHHHHHHHHHHHHHHHhc----CcEEEEEecCcCcCccch
Confidence 4789999999999999999999988 999999999999999976
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.4e-18 Score=131.52 Aligned_cols=100 Identities=21% Similarity=0.197 Sum_probs=72.2
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 80 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------- 142 (245)
T 3e9n_A 80 VHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPG----------------- 142 (245)
T ss_dssp EECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC---------------------------
T ss_pred EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCC-----------------
Confidence 58898753 23789999999999999999999999965 689999999887 43322
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||++++.++++++.|+.+. ||+|++|+||+|+|+|.+...
T Consensus 143 --------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~~ 188 (245)
T 3e9n_A 143 --------------------------NTIYAASKHALRGLADAFRKEEANN----GIRVSTVSPGPTNTPMLQGLM 188 (245)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCC---------
T ss_pred --------------------------chHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCCccCchhhhhh
Confidence 4789999999999999999999988 999999999999999987653
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.9e-18 Score=131.93 Aligned_cols=96 Identities=22% Similarity=0.237 Sum_probs=82.3
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 97 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------- 161 (252)
T 3f1l_A 97 LHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN--------------- 161 (252)
T ss_dssp EECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTT---------------
T ss_pred EECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCC---------------
Confidence 58999741 23789999999999999999999999965 589999999887 43322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+.+ .|+||+|+||+|+|+|..
T Consensus 162 ----------------------------~~~Y~asK~a~~~l~~~la~e~~~-----~irvn~v~PG~v~t~~~~ 203 (252)
T 3f1l_A 162 ----------------------------WGAYAASKFATEGMMQVLADEYQQ-----RLRVNCINPGGTRTAMRA 203 (252)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHTTT-----TCEEEEEECCSBSSHHHH
T ss_pred ----------------------------CchhHHHHHHHHHHHHHHHHHhcC-----CcEEEEEecCcccCchhh
Confidence 478999999999999999999975 499999999999999854
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.4e-18 Score=133.38 Aligned_cols=98 Identities=19% Similarity=0.189 Sum_probs=84.5
Q ss_pred CCCCCCC--------ccHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTV--------PFAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~--------~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.. ...++|++++++|+.|++.+++.++|.|.+ +|+||++||..+ ...+.
T Consensus 96 v~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 160 (281)
T 3svt_A 96 VHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRW--------------- 160 (281)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT---------------
T ss_pred EECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCC---------------
Confidence 5899972 123789999999999999999999999954 589999999887 43322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 161 ----------------------------~~~Y~asK~a~~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~ 204 (281)
T 3svt_A 161 ----------------------------FGAYGVTKSAVDHLMQLAADELGAS----WVRVNSIRPGLIRTDLVAA 204 (281)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSGGGHH
T ss_pred ----------------------------ChhHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeCcCcCcchhh
Confidence 4789999999999999999999988 9999999999999998653
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.3e-18 Score=132.12 Aligned_cols=98 Identities=18% Similarity=0.151 Sum_probs=85.2
Q ss_pred CCCCCCCcc-----------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVPF-----------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~~-----------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||.... .++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 91 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 156 (261)
T 2wyu_A 91 VHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK-------------- 156 (261)
T ss_dssp EECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT--------------
T ss_pred EECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCC--------------
Confidence 589987542 3789999999999999999999999987799999999776 33221
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.++++++.|+.++ ||+||+|+||+|+|++...
T Consensus 157 -----------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 200 (261)
T 2wyu_A 157 -----------------------------YNVMAIAKAALEASVRYLAYELGPK----GVRVNAISAGPVRTVAARS 200 (261)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCCCCTGGGG
T ss_pred -----------------------------chHHHHHHHHHHHHHHHHHHHHhhh----CcEEEEEeeCCCcCchhhh
Confidence 3689999999999999999999988 9999999999999998654
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.6e-18 Score=133.06 Aligned_cols=100 Identities=21% Similarity=0.119 Sum_probs=84.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+...+.
T Consensus 93 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------------- 155 (262)
T 3pk0_A 93 CANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGY----------------- 155 (262)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCC-----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC-----------------
Confidence 58999753 23789999999999999999999999964 58999999987631111
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
-....|++||++++.++++++.|+.++ ||+||+|+||+|+|++...
T Consensus 156 ------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~ 201 (262)
T 3pk0_A 156 ------------------------PGWSHYGATKAAQLGFMRTAAIELAPH----KITVNAIMPGNIMTEGLLE 201 (262)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCCHHHHT
T ss_pred ------------------------CCChhhHHHHHHHHHHHHHHHHHHHhh----CcEEEEEEeCcCcCccccc
Confidence 014789999999999999999999998 9999999999999987543
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.9e-18 Score=130.58 Aligned_cols=99 Identities=27% Similarity=0.404 Sum_probs=85.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 150 (246)
T 2uvd_A 87 VNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPG---------------- 150 (246)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCC----------------
Confidence 58999753 23789999999999999999999999964 489999999877 43222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++..++++++.|+.+. ||+|++|+||+|+|+|....
T Consensus 151 ---------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~~ 195 (246)
T 2uvd_A 151 ---------------------------QANYVAAKAGVIGLTKTSAKELASR----NITVNAIAPGFIATDMTDVL 195 (246)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBGGGCSSCC
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeccccCcchhhc
Confidence 4789999999999999999999988 99999999999999997653
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.9e-18 Score=132.26 Aligned_cols=100 Identities=21% Similarity=0.257 Sum_probs=85.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 108 i~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 171 (269)
T 3gk3_A 108 INNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFG---------------- 171 (269)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----------------
T ss_pred EECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCC----------------
Confidence 58998752 33789999999999999999999999954 589999999877 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||+++..|+++++.++.+. ||+|++|+||+|+|+|.....
T Consensus 172 ---------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~~ 217 (269)
T 3gk3_A 172 ---------------------------QANYASAKAGIHGFTKTLALETAKR----GITVNTVSPGYLATAMVEAVP 217 (269)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTTTC--
T ss_pred ---------------------------cchHHHHHHHHHHHHHHHHHHhhhc----CCEEEEEecCcccchhhhhhc
Confidence 4789999999999999999999988 999999999999999987653
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=3.5e-18 Score=130.35 Aligned_cols=97 Identities=25% Similarity=0.258 Sum_probs=83.4
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 99 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------- 163 (247)
T 3i1j_A 99 LHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRAN--------------- 163 (247)
T ss_dssp EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTT---------------
T ss_pred EECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCC---------------
Confidence 58999742 23789999999999999999999999965 489999999887 43322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhcc-ccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC-ELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~-~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..|+++++.|+.+ . ||+|++|+||+|+|+|..
T Consensus 164 ----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~----~i~v~~v~PG~v~t~~~~ 207 (247)
T 3i1j_A 164 ----------------------------WGAYGVSKFATEGLMQTLADELEGVT----AVRANSINPGATRTGMRA 207 (247)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHTTTS----SEEEEEEECCCCSSHHHH
T ss_pred ----------------------------cchhHHHHHHHHHHHHHHHHHhcCCC----CeEEEEEecCcccCccch
Confidence 478999999999999999999975 6 899999999999999864
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=6e-18 Score=132.27 Aligned_cols=97 Identities=21% Similarity=0.199 Sum_probs=80.9
Q ss_pred CCCCCCCcc------------HHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhcc
Q psy16223 1 MNRASTVPF------------AIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~~------------~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~ 66 (153)
|||||+... .++|++++++|+.|++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 84 vnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 151 (281)
T 3zv4_A 84 IPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGG------------ 151 (281)
T ss_dssp ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSS------------
T ss_pred EECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCC------------
Confidence 689997421 1569999999999999999999999954 689999999887 43322
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.++++++.|+.+ +|+||+|+||+|+|+|...
T Consensus 152 -------------------------------~~~Y~asKaa~~~l~~~la~e~~~-----~Irvn~v~PG~v~T~~~~~ 194 (281)
T 3zv4_A 152 -------------------------------GPLYTATKHAVVGLVRQMAFELAP-----HVRVNGVAPGGMNTDLRGP 194 (281)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHHHHHHHHTT-----TSEEEEEEECSSCC--CCC
T ss_pred -------------------------------CchhHHHHHHHHHHHHHHHHHhcC-----CCEEEEEECCcCcCCcccc
Confidence 468999999999999999999976 4999999999999999764
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.5e-18 Score=134.36 Aligned_cols=97 Identities=28% Similarity=0.319 Sum_probs=83.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhh--hhcC--CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFP--LLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp--~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|++.+++.++| .|++ .|+||++||..+ ...+.
T Consensus 106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~-------------- 171 (279)
T 3sju_A 106 VNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMY-------------- 171 (279)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTT--------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCC--------------
Confidence 58999753 2378999999999999999999999 5643 589999999887 44322
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.|+++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 172 -----------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~ 214 (279)
T 3sju_A 172 -----------------------------AAPYTASKHGVVGFTKSVGFELAKT----GITVNAVCPGYVETPMAE 214 (279)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEESSBCSHHHH
T ss_pred -----------------------------ChhHHHHHHHHHHHHHHHHHHHHhh----CcEEEEEeeCcccchHHH
Confidence 4789999999999999999999988 999999999999998754
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.2e-18 Score=133.19 Aligned_cols=99 Identities=25% Similarity=0.233 Sum_probs=79.8
Q ss_pred CCCCCCC-c-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCccc-c-cccccHHHHhhhhccccCh
Q psy16223 1 MNRASTV-P-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGH-L-SQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~-~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~-~-~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.. . ..++|++++++|+.|++.+++.++|.|+++|+||++||..+. . .+.
T Consensus 91 v~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------------- 154 (259)
T 3edm_A 91 VHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPG---------------- 154 (259)
T ss_dssp EECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTT----------------
T ss_pred EECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCC----------------
Confidence 5889865 1 237899999999999999999999999888999999998764 2 111
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||++++.++++++.|+.+ +|+||+|+||+|+|+|.....
T Consensus 155 ---------------------------~~~Y~asKaa~~~l~~~la~e~~~-----~I~vn~v~PG~v~T~~~~~~~ 199 (259)
T 3edm_A 155 ---------------------------ALAYATSKGAVMTFTRGLAKEVGP-----KIRVNAVCPGMISTTFHDTFT 199 (259)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHTT-----TCEEEEEEECCBCC-------
T ss_pred ---------------------------cHHHHHHHHHHHHHHHHHHHHHCC-----CCEEEEEEECCCcCccccccc
Confidence 468999999999999999999965 499999999999999987653
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.9e-18 Score=128.25 Aligned_cols=97 Identities=18% Similarity=0.153 Sum_probs=84.3
Q ss_pred CCCCCCC--------ccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTV--------PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~--------~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||.. ...++|++++++|+.|++.+++.++|.|+++|+||++||..+ ...+.
T Consensus 64 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------------- 126 (223)
T 3uce_A 64 IVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVAN----------------- 126 (223)
T ss_dssp EECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTT-----------------
T ss_pred EECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCC-----------------
Confidence 5899975 123789999999999999999999999998899999999887 43322
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.++++++.|+. +|+||+|+||+|+|+|....
T Consensus 127 --------------------------~~~Y~asK~a~~~~~~~la~e~~------~i~vn~v~PG~v~t~~~~~~ 169 (223)
T 3uce_A 127 --------------------------TYVKAAINAAIEATTKVLAKELA------PIRVNAISPGLTKTEAYKGM 169 (223)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHT------TSEEEEEEECSBCSGGGTTS
T ss_pred --------------------------chHHHHHHHHHHHHHHHHHHhhc------CcEEEEEEeCCCcchhhhhc
Confidence 47899999999999999999985 39999999999999987654
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.1e-18 Score=134.53 Aligned_cols=97 Identities=20% Similarity=0.158 Sum_probs=84.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 113 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 177 (301)
T 3tjr_A 113 FSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAG--------------- 177 (301)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT---------------
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC---------------
Confidence 58999752 23789999999999999999999999964 579999999888 44322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..|+++++.|+.+. ||+|++|+||+|+|+|..
T Consensus 178 ----------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~ 220 (301)
T 3tjr_A 178 ----------------------------LGTYGVAKYGVVGLAETLAREVKPN----GIGVSVLCPMVVETKLVS 220 (301)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEECCSCCCSSHHH
T ss_pred ----------------------------chHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEECCcccccccc
Confidence 4789999999999999999999988 999999999999999864
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.74 E-value=6e-18 Score=132.55 Aligned_cols=98 Identities=16% Similarity=0.156 Sum_probs=83.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ .....
T Consensus 98 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------------- 161 (285)
T 3sc4_A 98 VNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL---------------- 161 (285)
T ss_dssp EECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC----------------
Confidence 68999753 23789999999999999999999999975 489999999887 33201
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCC-cccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPG-YVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG-~v~T~~~~ 144 (153)
....|++||+++..|+++|+.|+.+. ||+||+|+|| +++|+|.+
T Consensus 162 --------------------------~~~~Y~asKaal~~~~~~la~e~~~~----gI~vn~v~PG~~v~t~~~~ 206 (285)
T 3sc4_A 162 --------------------------RPTPYMMAKYGMTLCALGIAEELRDA----GIASNTLWPRTTVATAAVQ 206 (285)
T ss_dssp --------------------------CSHHHHHHHHHHHHHHHHHHHHTGGG----TCEEEEEECSSCBCCHHHH
T ss_pred --------------------------CCchHHHHHHHHHHHHHHHHHHhccc----CcEEEEEeCCCccccHHHH
Confidence 13789999999999999999999998 9999999999 68998753
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.6e-18 Score=131.94 Aligned_cols=100 Identities=22% Similarity=0.228 Sum_probs=85.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCccc-ccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAGH-LSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|.+ +++||++||..+. ....
T Consensus 114 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~--------------- 178 (276)
T 3r1i_A 114 VCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP--------------- 178 (276)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS---------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC---------------
Confidence 58999863 23789999999999999999999999964 4899999998873 2110
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
.....|++||++++.++++++.|+.+. ||+||+|+||+|+|+|.+.
T Consensus 179 --------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~~~ 224 (276)
T 3r1i_A 179 --------------------------QQVSHYCTSKAAVVHLTKAMAVELAPH----QIRVNSVSPGYIRTELVEP 224 (276)
T ss_dssp --------------------------SCCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCSTTTGG
T ss_pred --------------------------CCcchHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEeeCCCcCCcccc
Confidence 013689999999999999999999988 9999999999999999764
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=7.8e-18 Score=130.39 Aligned_cols=100 Identities=20% Similarity=0.224 Sum_probs=84.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCccc-ccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGH-LSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+. ..+.
T Consensus 101 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------------- 164 (260)
T 3un1_A 101 VNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVG---------------- 164 (260)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCC----------------
Confidence 58999752 23789999999999999999999999954 4899999998763 2211
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
.+...|++||++++.++++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 165 -------------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~ 210 (260)
T 3un1_A 165 -------------------------MPSALASLTKGGLNAVTRSLAMEFSRS----GVRVNAVSPGVIKTPMHPA 210 (260)
T ss_dssp -------------------------CCCHHHHHHHHHHHHHHHHHHHHTTTT----TEEEEEEEECCBCCTTSCG
T ss_pred -------------------------CccHHHHHHHHHHHHHHHHHHHHhCcC----CeEEEEEeecCCCCCCCCH
Confidence 224789999999999999999999988 9999999999999998753
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.8e-18 Score=130.30 Aligned_cols=99 Identities=22% Similarity=0.174 Sum_probs=81.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 106 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------- 170 (266)
T 3o38_A 106 VNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHS--------------- 170 (266)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTT---------------
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCC---------------
Confidence 58999753 23789999999999999999999999964 479999999887 43322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.|+++++.|+.+. ||+|++|+||+|+|+|.+..
T Consensus 171 ----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~ 215 (266)
T 3o38_A 171 ----------------------------QSHYAAAKAGVMALTRCSAIEAVEF----GVRINAVSPSIARHKFLEKT 215 (266)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCCCC------
T ss_pred ----------------------------CchHHHHHHHHHHHHHHHHHHHHHc----CcEEEEEeCCcccchhhhcc
Confidence 4789999999999999999999988 99999999999999997654
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=128.29 Aligned_cols=98 Identities=20% Similarity=0.140 Sum_probs=83.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||......+.
T Consensus 82 vn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------------- 144 (245)
T 1uls_A 82 VHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLG----------------- 144 (245)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTT-----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCCC-----------------
Confidence 58999753 23789999999999999999999999965 48999999977222111
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..++++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 145 --------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 188 (245)
T 1uls_A 145 --------------------------QANYAASMAGVVGLTRTLALELGRW----GIRVNTLAPGFIETRMTAK 188 (245)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTTSS
T ss_pred --------------------------chhHHHHHHHHHHHHHHHHHHHhHh----CeEEEEEEeCcCcCcchhh
Confidence 3689999999999999999999988 9999999999999999764
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=7.5e-18 Score=131.45 Aligned_cols=99 Identities=13% Similarity=0.058 Sum_probs=86.5
Q ss_pred CCCCCCCc------------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhcc
Q psy16223 1 MNRASTVP------------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~------------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~ 66 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 108 i~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 175 (280)
T 3nrc_A 108 VHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPS------------ 175 (280)
T ss_dssp EECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTT------------
T ss_pred EECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCC------------
Confidence 58999763 33789999999999999999999999974 699999999887 43322
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.|+++++.|+.+. ||+|++|+||+|+|+|....
T Consensus 176 -------------------------------~~~Y~asKaal~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~ 220 (280)
T 3nrc_A 176 -------------------------------YNTMGVAKASLEATVRYTALALGED----GIKVNAVSAGPIKTLAASGI 220 (280)
T ss_dssp -------------------------------THHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCCCCSGGGGC
T ss_pred -------------------------------chhhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEeeccccchhhhcC
Confidence 4789999999999999999999998 99999999999999997654
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-18 Score=132.07 Aligned_cols=97 Identities=13% Similarity=0.006 Sum_probs=84.3
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 81 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------- 143 (241)
T 1dhr_A 81 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG----------------- 143 (241)
T ss_dssp EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-----------------
T ss_pred EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCC-----------------
Confidence 58998642 23789999999999999999999999987899999999887 33221
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc--cccCCCCeEEEEeeCCcccCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD--CELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~--~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+. +. ||+|++|+||+|+|+|..
T Consensus 144 --------------------------~~~Y~asK~a~~~~~~~la~e~~~~~~----gi~v~~v~PG~v~T~~~~ 188 (241)
T 1dhr_A 144 --------------------------MIGYGMAKGAVHQLCQSLAGKNSGMPS----GAAAIAVLPVTLDTPMNR 188 (241)
T ss_dssp --------------------------BHHHHHHHHHHHHHHHHHTSTTSSCCT----TCEEEEEEESCEECHHHH
T ss_pred --------------------------chHHHHHHHHHHHHHHHHHHHhccCCC----CeEEEEEecCcccCcccc
Confidence 47899999999999999999998 77 899999999999999864
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=9.5e-18 Score=130.28 Aligned_cols=97 Identities=29% Similarity=0.344 Sum_probs=84.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCc-c-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSA-G-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~-~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||.. + ...+.
T Consensus 104 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------------- 168 (267)
T 1vl8_A 104 VNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN--------------- 168 (267)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS---------------
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCC---------------
Confidence 58998753 23789999999999999999999999965 48999999987 5 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+.+. ||+|++|+||+|+|+|..
T Consensus 169 ----------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~ 211 (267)
T 1vl8_A 169 ----------------------------ISAYAASKGGVASLTKALAKEWGRY----GIRVNVIAPGWYRTKMTE 211 (267)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCSTTTH
T ss_pred ----------------------------ChhHHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeccCcccccc
Confidence 3689999999999999999999988 999999999999999864
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=7.3e-18 Score=128.72 Aligned_cols=99 Identities=20% Similarity=0.283 Sum_probs=86.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|.+ .++||++||..+ ...+.
T Consensus 87 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 150 (247)
T 3lyl_A 87 VNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPG---------------- 150 (247)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----------------
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC----------------
Confidence 58999753 23789999999999999999999999954 589999999887 44322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++..++++++.|+.+. ||+|++|+||+|+|+|.+..
T Consensus 151 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~ 195 (247)
T 3lyl_A 151 ---------------------------QTNYCAAKAGVIGFSKSLAYEVASR----NITVNVVAPGFIATDMTDKL 195 (247)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTTTTS
T ss_pred ---------------------------cHHHHHHHHHHHHHHHHHHHHHHHc----CeEEEEEeeCcEecccchhc
Confidence 4789999999999999999999988 99999999999999998764
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-18 Score=148.58 Aligned_cols=96 Identities=21% Similarity=0.181 Sum_probs=83.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||+.. ..++|+++++||+.|++.++|.++|+|++ .|+||++||..+ .+.+.
T Consensus 96 VnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~---------------- 159 (604)
T 2et6_A 96 INNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG---------------- 159 (604)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC----------------
Confidence 69999752 23789999999999999999999999964 589999999887 44332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+|+.+|+++|+.|+.+. ||+||+|+|| ++|+|..
T Consensus 160 ---------------------------~~~Y~asKaal~~lt~~la~El~~~----gIrVn~v~Pg-~~T~m~~ 201 (604)
T 2et6_A 160 ---------------------------QANYASAKSALLGFAETLAKEGAKY----NIKANAIAPL-ARSRMTE 201 (604)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEEC-CCCHHHH
T ss_pred ---------------------------chHHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEccC-CcCcccc
Confidence 4689999999999999999999998 9999999998 6888754
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=6.4e-18 Score=131.42 Aligned_cols=98 Identities=26% Similarity=0.305 Sum_probs=80.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 104 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------------- 167 (273)
T 1ae1_A 104 VNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS---------------- 167 (273)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCC----------------
Confidence 58998753 23789999999999999999999999954 589999999887 33222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..++++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 168 ---------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 211 (273)
T 1ae1_A 168 ---------------------------VSLYSASKGAINQMTKSLACEWAKD----NIRVNSVAPGVILTPLVET 211 (273)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBC------
T ss_pred ---------------------------cchhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEEeCCCcCchhhh
Confidence 4789999999999999999999988 9999999999999999754
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-17 Score=130.91 Aligned_cols=85 Identities=19% Similarity=0.104 Sum_probs=75.5
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC--------CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHH
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR--------HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFM 81 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~--------~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (153)
++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 138 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------------------- 190 (288)
T 2x9g_A 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMA--------------------------- 190 (288)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTTSCCTT---------------------------
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCCCCC---------------------------
Confidence 679999999999999999999999965 579999999887 43222
Q ss_pred HHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 82 DITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|++||+++..|+++++.|+.+. ||+||+|+||+|+|+|
T Consensus 191 ----------------~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~ 231 (288)
T 2x9g_A 191 ----------------FSLYNMGKHALVGLTQSAALELAPY----GIRVNGVAPGVSLLPV 231 (288)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSCSCCT
T ss_pred ----------------CchHHHHHHHHHHHHHHHHHHhhcc----CeEEEEEEeccccCcc
Confidence 4789999999999999999999988 9999999999999998
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=7.5e-18 Score=128.79 Aligned_cols=99 Identities=20% Similarity=0.222 Sum_probs=77.5
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 89 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 152 (249)
T 3f9i_A 89 VCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPG---------------- 152 (249)
T ss_dssp EECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSC----------------
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCC----------------
Confidence 589987532 2679999999999999999999999954 589999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++..++++++.|+... ||++++|+||+|+|+|.+..
T Consensus 153 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~ 197 (249)
T 3f9i_A 153 ---------------------------QANYCASKAGLIGMTKSLSYEVATR----GITVNAVAPGFIKSDMTDKL 197 (249)
T ss_dssp ---------------------------SHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBC------C
T ss_pred ---------------------------CchhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEecCccccCccccc
Confidence 4789999999999999999999988 99999999999999998754
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=5.1e-18 Score=130.19 Aligned_cols=99 Identities=22% Similarity=0.299 Sum_probs=86.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 96 v~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 159 (256)
T 3ezl_A 96 VNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG---------------- 159 (256)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSC----------------
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCC----------------
Confidence 58999753 23789999999999999999999999965 489999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.++++++.|+... ||+|++|+||+|+|+|.+..
T Consensus 160 ---------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~ 204 (256)
T 3ezl_A 160 ---------------------------QTNYSTAKAGIHGFTMSLAQEVATK----GVTVNTVSPGYIGTDMVKAI 204 (256)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHTS
T ss_pred ---------------------------CcccHHHHHHHHHHHHHHHHHHHHh----CCEEEEEEECcccCcccccc
Confidence 4789999999999999999999988 99999999999999987653
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.73 E-value=8.6e-18 Score=129.03 Aligned_cols=98 Identities=22% Similarity=0.175 Sum_probs=79.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 79 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------------- 142 (250)
T 2fwm_X 79 VNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIG---------------- 142 (250)
T ss_dssp EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT----------------
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC----------------
Confidence 58998753 33789999999999999999999999964 589999999887 33222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.++++++.|+.+. ||+|++|+||+++|++...
T Consensus 143 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 186 (250)
T 2fwm_X 143 ---------------------------MSAYGASKAALKSLALSVGLELAGS----GVRCNVVSPGSTDTDMQRT 186 (250)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCC-------
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHhCcc----CCEEEEEECCcccCccccc
Confidence 4789999999999999999999988 9999999999999998654
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.6e-18 Score=131.78 Aligned_cols=97 Identities=22% Similarity=0.215 Sum_probs=80.0
Q ss_pred CCCCCCCcc--------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--Cc-cEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVPF--------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HA-RVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~~--------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g-~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ .+ +||++||..+ ...+.
T Consensus 102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~-------------- 167 (272)
T 2nwq_A 102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPG-------------- 167 (272)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTT--------------
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCC--------------
Confidence 589987532 3789999999999999999999999964 46 9999999887 43222
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 168 -----------------------------~~~Y~asKaa~~~l~~~la~el~~~----gIrvn~v~PG~v~T~~~~ 210 (272)
T 2nwq_A 168 -----------------------------SHVYGGTKAFVEQFSLNLRCDLQGT----GVRVTNLEPGLCESEFSL 210 (272)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHTTCTTS----CCEEEEEEECSBC-----
T ss_pred -----------------------------CchHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEEcCCCcCcchh
Confidence 3689999999999999999999888 999999999999999865
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=6.5e-18 Score=130.76 Aligned_cols=97 Identities=29% Similarity=0.280 Sum_probs=84.1
Q ss_pred CCCCCCCcc--------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF--------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~--------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 97 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 161 (267)
T 1iy8_A 97 FNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN--------------- 161 (267)
T ss_dssp EECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS---------------
T ss_pred EECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCC---------------
Confidence 589987532 3789999999999999999999999964 589999999887 43222
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..++++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 162 ----------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~ 204 (267)
T 1iy8_A 162 ----------------------------QSGYAAAKHGVVGLTRNSAVEYGRY----GIRINAIAPGAIWTPMVE 204 (267)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSHHHH
T ss_pred ----------------------------CccHHHHHHHHHHHHHHHHHHHHhc----CeEEEEEEeCCCcCcchh
Confidence 4789999999999999999999988 999999999999999853
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-17 Score=128.79 Aligned_cols=100 Identities=22% Similarity=0.204 Sum_probs=79.1
Q ss_pred CCCCCCC--------ccHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTV--------PFAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~--------~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.. ...++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 111 v~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 175 (262)
T 3rkr_A 111 VNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVAD--------------- 175 (262)
T ss_dssp EECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTT---------------
T ss_pred EECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCC---------------
Confidence 5899872 123789999999999999999999999953 589999999888 43322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||++++.++++++.++.+. ||+|++|+||+|+|+|.....
T Consensus 176 ----------------------------~~~Y~asKaa~~~l~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~~ 221 (262)
T 3rkr_A 176 ----------------------------GAAYTASKWGLNGLMTSAAEELRQH----QVRVSLVAPGSVRTEFGVGLS 221 (262)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCC---------
T ss_pred ----------------------------CchHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCCCcCCcccccc
Confidence 4789999999999999999999988 999999999999999986654
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=6.3e-18 Score=130.08 Aligned_cols=97 Identities=23% Similarity=0.251 Sum_probs=83.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 148 (256)
T 1geg_A 84 VNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE--------------- 148 (256)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC---------------
Confidence 58998753 23789999999999999999999999964 589999999887 43322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 149 ----------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~ 191 (256)
T 1geg_A 149 ----------------------------LAVYSSSKFAVRGLTQTAARDLAPL----GITVNGYCPGIVKTPMWA 191 (256)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBSSHHHH
T ss_pred ----------------------------chhHHHHHHHHHHHHHHHHHHHHHc----CeEEEEEEECCCccchhh
Confidence 3689999999999999999999988 999999999999998743
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.8e-18 Score=131.73 Aligned_cols=95 Identities=24% Similarity=0.249 Sum_probs=81.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .|+||++||..+ ...+.
T Consensus 86 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 149 (269)
T 3vtz_A 86 VNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKN---------------- 149 (269)
T ss_dssp EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT----------------
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC----------------
Confidence 58999753 23789999999999999999999999954 589999999887 43222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|++||++++.|+++++.|+.+ ||+||+|+||+|+|+|.
T Consensus 150 ---------------------------~~~Y~asKaa~~~l~~~la~e~~~-----~i~vn~v~PG~v~T~~~ 190 (269)
T 3vtz_A 150 ---------------------------AAAYVTSKHALLGLTRSVAIDYAP-----KIRCNAVCPGTIMTPMV 190 (269)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHTT-----TEEEEEEEECSBCCHHH
T ss_pred ---------------------------ChhHHHHHHHHHHHHHHHHHHhcC-----CCEEEEEEECCCcCcch
Confidence 478999999999999999999965 69999999999999875
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.72 E-value=6.8e-18 Score=130.04 Aligned_cols=97 Identities=22% Similarity=0.204 Sum_probs=83.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--C-ccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--H-ARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~-g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ . ++||++||..+ ...+.
T Consensus 86 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 150 (258)
T 3a28_C 86 VNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPI--------------- 150 (258)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTT---------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCC---------------
Confidence 58998753 23789999999999999999999999953 3 89999999887 43222
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..++++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 151 ----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~ 193 (258)
T 3a28_C 151 ----------------------------LSAYSTTKFAVRGLTQAAAQELAPK----GHTVNAYAPGIVGTGMWE 193 (258)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCSHHHH
T ss_pred ----------------------------chhHHHHHHHHHHHHHHHHHHHHhh----CeEEEEEECCccCChhhh
Confidence 4789999999999999999999988 999999999999999853
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-17 Score=128.86 Aligned_cols=95 Identities=16% Similarity=0.143 Sum_probs=81.1
Q ss_pred CCCCCCCc----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCC----ccEEEecCCcc-cccccccHHHHhhhhc
Q psy16223 1 MNRASTVP----------FAIQAEKTILTNYLGLVRTCVFLFPLLRRH----ARVVNLSSSAG-HLSQITNLELKKRLME 65 (153)
Q Consensus 1 innag~~~----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~----g~iv~~sS~~~-~~~~~~~~~~~~~~~~ 65 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++. |+||++||..+ ...+.
T Consensus 97 vnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 165 (259)
T 1oaa_A 97 INNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKG----------- 165 (259)
T ss_dssp EECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTT-----------
T ss_pred EECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCCC-----------
Confidence 58998741 347899999999999999999999999653 79999999887 43222
Q ss_pred cccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..|+++++.|+. +|+||+|+||+|+|+|..
T Consensus 166 --------------------------------~~~Y~asKaa~~~~~~~la~e~~------~i~vn~v~PG~v~T~~~~ 206 (259)
T 1oaa_A 166 --------------------------------WGLYCAGKAARDMLYQVLAAEEP------SVRVLSYAPGPLDNDMQQ 206 (259)
T ss_dssp --------------------------------CHHHHHHHHHHHHHHHHHHHHCT------TEEEEEEECCSBSSHHHH
T ss_pred --------------------------------ccHHHHHHHHHHHHHHHHHhhCC------CceEEEecCCCcCcchHH
Confidence 47899999999999999999984 499999999999999854
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=4.2e-18 Score=129.51 Aligned_cols=97 Identities=15% Similarity=0.101 Sum_probs=84.1
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------- 139 (236)
T 1ooe_A 77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS----------------- 139 (236)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-----------------
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCC-----------------
Confidence 58998642 23789999999999999999999999987899999999887 33222
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc--cccCCCCeEEEEeeCCcccCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD--CELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~--~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+. +. ||+|++|+||+|+|+|.+
T Consensus 140 --------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~~----gi~v~~v~Pg~v~t~~~~ 184 (236)
T 1ooe_A 140 --------------------------MIGYGMAKAAVHHLTSSLAAKDSGLPD----NSAVLTIMPVTLDTPMNR 184 (236)
T ss_dssp --------------------------BHHHHHHHHHHHHHHHHHHSTTSSCCT----TCEEEEEEESCBCCHHHH
T ss_pred --------------------------cHHHHHHHHHHHHHHHHHHHHhcccCC----CeEEEEEecCcccCcchh
Confidence 47899999999999999999997 77 899999999999999864
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.72 E-value=6.7e-18 Score=133.18 Aligned_cols=99 Identities=23% Similarity=0.164 Sum_probs=83.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+...+.
T Consensus 124 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~----------------- 186 (293)
T 3rih_A 124 CANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGY----------------- 186 (293)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBC-----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCC-----------------
Confidence 58999753 23789999999999999999999999964 58999999988731111
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
-....|++||++++.|+++++.|+.+. ||+||+|+||+|+|++..
T Consensus 187 ------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~ 231 (293)
T 3rih_A 187 ------------------------PGWSHYGASKAAQLGFMRTAAIELAPR----GVTVNAILPGNILTEGLV 231 (293)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCCHHHH
T ss_pred ------------------------CCCHHHHHHHHHHHHHHHHHHHHHhhh----CeEEEEEecCCCcCcchh
Confidence 014789999999999999999999998 999999999999998754
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-17 Score=133.18 Aligned_cols=86 Identities=13% Similarity=0.034 Sum_probs=77.2
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhhcC--------CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 10 AIQAEKTILTNYLGLVRTCVFLFPLLRR--------HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 10 ~~~~~~~~~vN~~g~~~l~~~~lp~l~~--------~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
.++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 177 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~-------------------------- 230 (328)
T 2qhx_A 177 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLG-------------------------- 230 (328)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCCTT--------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCCCC--------------------------
Confidence 6789999999999999999999999953 579999999887 43222
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|++||+++..|++.|+.|+.+. ||+||+|+||+|+|+|
T Consensus 231 -----------------~~~Y~asKaal~~l~~~la~el~~~----gIrvn~v~PG~v~T~~ 271 (328)
T 2qhx_A 231 -----------------YTIYTMAKGALEGLTRSAALELAPL----QIRVNGVGPGLSVLVD 271 (328)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBSCCC
T ss_pred -----------------cHHHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEecCcccCCc
Confidence 4789999999999999999999988 9999999999999998
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-17 Score=133.20 Aligned_cols=99 Identities=18% Similarity=0.128 Sum_probs=80.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--------CccEEEecCCcc-cccccccHHHHhhhh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--------HARVVNLSSSAG-HLSQITNLELKKRLM 64 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--------~g~iv~~sS~~~-~~~~~~~~~~~~~~~ 64 (153)
|||||+.. ..++|++++++|+.|++.+++.++|.|.+ +|+||++||..+ ...+.
T Consensus 92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~---------- 161 (319)
T 3ioy_A 92 CNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS---------- 161 (319)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS----------
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC----------
Confidence 58999752 23789999999999999999999999953 689999999988 43322
Q ss_pred ccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 65 EDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++.+|+++++.|+.+. ||+|++|+||+|+|+|..
T Consensus 162 ---------------------------------~~~Y~aSKaal~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~ 204 (319)
T 3ioy_A 162 ---------------------------------PGIYNTTKFAVRGLSESLHYSLLKY----EIGVSVLCPGLVKSYIYA 204 (319)
T ss_dssp ---------------------------------SHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEECCCCBC-----
T ss_pred ---------------------------------CHHHHHHHHHHHHHHHHHHHHhhhc----CCEEEEEEcCeEccCccc
Confidence 4689999999999999999999988 999999999999999986
Q ss_pred CC
Q psy16223 145 FM 146 (153)
Q Consensus 145 ~~ 146 (153)
..
T Consensus 205 ~~ 206 (319)
T 3ioy_A 205 SD 206 (319)
T ss_dssp --
T ss_pred cc
Confidence 43
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.72 E-value=6.4e-18 Score=131.18 Aligned_cols=100 Identities=21% Similarity=0.289 Sum_probs=82.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 112 i~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 175 (271)
T 4iin_A 112 VNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMG---------------- 175 (271)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----------------
T ss_pred EECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCC----------------
Confidence 58999853 23789999999999999999999999964 489999999887 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||+++..++++++.|+... ||+|++|+||+|+|+|.+...
T Consensus 176 ---------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~~ 221 (271)
T 4iin_A 176 ---------------------------QTNYSASKGGMIAMSKSFAYEGALR----NIRFNSVTPGFIETDMNANLK 221 (271)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECSBCCC------
T ss_pred ---------------------------chHhHHHHHHHHHHHHHHHHHHHHh----CcEEEEEEeCcccCCchhhhc
Confidence 4789999999999999999999888 999999999999999987653
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-17 Score=130.31 Aligned_cols=98 Identities=17% Similarity=0.196 Sum_probs=84.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++.++||++||..+ ...+.
T Consensus 112 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------------------ 173 (283)
T 1g0o_A 112 CSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP------------------ 173 (283)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS------------------
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC------------------
Confidence 58999753 24789999999999999999999999977799999999887 32210
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....|++||++++.++++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 174 ------------------------~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~ 217 (283)
T 1g0o_A 174 ------------------------KHAVYSGSKGAIETFARCMAIDMADK----KITVNVVAPGGIKTDMYH 217 (283)
T ss_dssp ------------------------SCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBSSHHHH
T ss_pred ------------------------CCcchHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCcccchhhh
Confidence 13689999999999999999999988 999999999999999743
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-17 Score=133.61 Aligned_cols=99 Identities=18% Similarity=0.123 Sum_probs=81.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 88 VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~---------------- 151 (327)
T 1jtv_A 88 VCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF---------------- 151 (327)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT----------------
T ss_pred EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCC----------------
Confidence 58998742 23789999999999999999999999953 589999999887 43222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.|+++++.|+.+. ||+|++|+||+|+|+|....
T Consensus 152 ---------------------------~~~Y~aSK~a~~~~~~~la~el~~~----gI~v~~v~PG~v~T~~~~~~ 196 (327)
T 1jtv_A 152 ---------------------------NDVYCASKFALEGLCESLAVLLLPF----GVHLSLIECGPVHTAFMEKV 196 (327)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCC------
T ss_pred ---------------------------ChHHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEEeCcccChHHhhh
Confidence 4689999999999999999999988 99999999999999997653
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=7.9e-18 Score=130.08 Aligned_cols=97 Identities=22% Similarity=0.193 Sum_probs=83.7
Q ss_pred CCCCCCC-c-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTV-P-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~-~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.. . ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 89 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 153 (262)
T 1zem_A 89 FNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN--------------- 153 (262)
T ss_dssp EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT---------------
T ss_pred EECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC---------------
Confidence 5899865 2 23789999999999999999999999964 589999999877 43221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..++++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 154 ----------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~ 196 (262)
T 1zem_A 154 ----------------------------MAAYGTSKGAIIALTETAALDLAPY----NIRVNAISPGYMGPGFMW 196 (262)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSSHHH
T ss_pred ----------------------------CchHHHHHHHHHHHHHHHHHHHHhh----CeEEEEEecCCcCcchhh
Confidence 3689999999999999999999988 999999999999999853
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=9.3e-18 Score=129.25 Aligned_cols=97 Identities=27% Similarity=0.377 Sum_probs=83.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 147 (254)
T 1hdc_A 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL---------------- 147 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC----------------
Confidence 58998753 23789999999999999999999999964 589999999887 33222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..++++++.|+.+. ||+|++|+||+|+|+|..
T Consensus 148 ---------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~ 190 (254)
T 1hdc_A 148 ---------------------------TSSYGASKWGVRGLSKLAAVELGTD----RIRVNSVHPGMTYTPMTA 190 (254)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHH
T ss_pred ---------------------------chhHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecccCcCcccc
Confidence 4789999999999999999999988 999999999999998743
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-17 Score=128.96 Aligned_cols=96 Identities=21% Similarity=0.205 Sum_probs=79.7
Q ss_pred CCCCCCCc------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCC--ccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP------FAIQAEKTILTNYLGLVRTCVFLFPLLRRH--ARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~--g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++. ++||++||..+ ...+.
T Consensus 104 v~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------------- 166 (260)
T 3gem_A 104 VHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSK----------------- 166 (260)
T ss_dssp EECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSS-----------------
T ss_pred EECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCC-----------------
Confidence 58998752 237899999999999999999999999763 89999999887 43322
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.|+++++.|+.+ +|+||+|+||+|+|++..
T Consensus 167 --------------------------~~~Y~asKaa~~~l~~~la~e~~~-----~Irvn~v~PG~v~t~~~~ 208 (260)
T 3gem_A 167 --------------------------HIAYCATKAGLESLTLSFAARFAP-----LVKVNGIAPALLMFQPKD 208 (260)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHTT-----TCEEEEEEECTTCC----
T ss_pred --------------------------cHhHHHHHHHHHHHHHHHHHHHCC-----CCEEEEEeecccccCCCC
Confidence 478999999999999999999975 599999999999999754
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-17 Score=128.67 Aligned_cols=84 Identities=19% Similarity=0.077 Sum_probs=74.1
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC-C------ccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHH
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR-H------ARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMD 82 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~-~------g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (153)
++|++++++|+.|++.+++.++|.|++ . ++||++||..+ ...+.
T Consensus 127 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------------------- 178 (276)
T 1mxh_A 127 AQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPG---------------------------- 178 (276)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSCCTT----------------------------
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCCCCC----------------------------
Confidence 789999999999999999999999963 3 89999999887 43222
Q ss_pred HhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 83 ITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
...|++||+++..++++++.|+.+. ||+||+|+||+|+|+
T Consensus 179 ---------------~~~Y~asK~a~~~l~~~la~e~~~~----gi~v~~v~PG~v~t~ 218 (276)
T 1mxh_A 179 ---------------FCVYTMAKHALGGLTRAAALELAPR----HIRVNAVAPGLSLLP 218 (276)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBSCC
T ss_pred ---------------CeehHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCcccCC
Confidence 4789999999999999999999988 999999999999998
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-17 Score=129.86 Aligned_cols=97 Identities=32% Similarity=0.396 Sum_probs=83.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--C----ccEEEecCCcc-cccccccHHHHhhhhcc
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--H----ARVVNLSSSAG-HLSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~----g~iv~~sS~~~-~~~~~~~~~~~~~~~~~ 66 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ . ++||++||..+ ...+.
T Consensus 110 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~------------ 177 (276)
T 2b4q_A 110 VNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGE------------ 177 (276)
T ss_dssp EECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCC------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCC------------
Confidence 58998652 23789999999999999999999999953 3 89999999887 33221
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCc-hhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDS-AYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.. .|++||++++.++++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 178 -------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~----gI~vn~v~PG~v~T~~~~ 221 (276)
T 2b4q_A 178 -------------------------------QAYAYGPSKAALHQLSRMLAKELVGE----HINVNVIAPGRFPSRMTR 221 (276)
T ss_dssp -------------------------------SCTTHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCCCSTTTH
T ss_pred -------------------------------CccccHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeccCcCcchh
Confidence 35 89999999999999999999988 999999999999999864
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-17 Score=128.49 Aligned_cols=97 Identities=25% Similarity=0.253 Sum_probs=83.8
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 82 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------------- 145 (256)
T 2d1y_A 82 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE---------------- 145 (256)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC----------------
Confidence 589987532 3789999999999999999999999965 489999999887 43222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+++|++..
T Consensus 146 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~ 188 (256)
T 2d1y_A 146 ---------------------------NAAYNASKGGLVNLTRSLALDLAPL----RIRVNAVAPGAIATEAVL 188 (256)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHH
T ss_pred ---------------------------ChhHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEeeCCccCchhh
Confidence 4689999999999999999999988 999999999999998743
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.7e-17 Score=126.50 Aligned_cols=99 Identities=19% Similarity=0.168 Sum_probs=83.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCccc-ccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGH-LSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+. ....
T Consensus 75 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 138 (239)
T 2ekp_A 75 VHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGP---------------- 138 (239)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCC----------------
Confidence 58898742 33789999999999999999999999964 5899999998873 2200
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.....|++||++++.++++++.|+.+. ||++++|+||+++|+|..
T Consensus 139 -------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~ 183 (239)
T 2ekp_A 139 -------------------------VPIPAYTTAKTALLGLTRALAKEWARL----GIRVNLLCPGYVETEFTL 183 (239)
T ss_dssp -------------------------SCCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSGGGH
T ss_pred -------------------------CCCccHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEEeCCccCchhh
Confidence 014789999999999999999999988 999999999999999854
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-17 Score=128.75 Aligned_cols=97 Identities=12% Similarity=-0.023 Sum_probs=84.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 90 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 153 (260)
T 2z1n_A 90 VYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQD---------------- 153 (260)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC----------------
Confidence 58998652 23789999999999999999999999964 489999999887 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..+++.++.|+.+. ||+|++|+||+|+|+|..
T Consensus 154 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~ 196 (260)
T 2z1n_A 154 ---------------------------LALSNIMRLPVIGVVRTLALELAPH----GVTVNAVLPSLILTDRVR 196 (260)
T ss_dssp ---------------------------BHHHHHHTHHHHHHHHHHHHHHGGG----TEEEEEEEECHHHHCCCC
T ss_pred ---------------------------CchhHHHHHHHHHHHHHHHHHHhhh----CeEEEEEEECCcccchhh
Confidence 4689999999999999999999988 999999999999999976
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-17 Score=128.14 Aligned_cols=97 Identities=26% Similarity=0.326 Sum_probs=82.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 149 (247)
T 1uzm_A 86 VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN---------------- 149 (247)
T ss_dssp EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----C----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCC----------------
Confidence 58998753 23789999999999999999999999964 489999999887 43222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..++++++.|+.+. ||+|++|+||+++|+|..
T Consensus 150 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~ 192 (247)
T 1uzm_A 150 ---------------------------QANYAASKAGVIGMARSIARELSKA----NVTANVVAPGYIDTDMTR 192 (247)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHH
T ss_pred ---------------------------ChhHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEEeCCCcccchh
Confidence 4789999999999999999999988 999999999999999754
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-17 Score=131.51 Aligned_cols=99 Identities=24% Similarity=0.258 Sum_probs=85.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--------CccEEEecCCcc-cccccccHHHHhhhh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--------HARVVNLSSSAG-HLSQITNLELKKRLM 64 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--------~g~iv~~sS~~~-~~~~~~~~~~~~~~~ 64 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +|+||++||..+ ...+.
T Consensus 119 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~---------- 188 (322)
T 3qlj_A 119 VNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVG---------- 188 (322)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBTT----------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCCC----------
Confidence 68999753 23789999999999999999999999863 279999999887 44322
Q ss_pred ccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 65 EDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.|+++++.|+.+. ||+||+|+|| ++|+|..
T Consensus 189 ---------------------------------~~~Y~asKaal~~l~~~la~e~~~~----gI~vn~v~PG-~~t~~~~ 230 (322)
T 3qlj_A 189 ---------------------------------QGNYSAAKAGIATLTLVGAAEMGRY----GVTVNAIAPS-ARTRMTE 230 (322)
T ss_dssp ---------------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEEC-TTSCCSC
T ss_pred ---------------------------------CccHHHHHHHHHHHHHHHHHHhccc----CcEEEEecCC-CCCccch
Confidence 4789999999999999999999998 9999999999 9999987
Q ss_pred CCC
Q psy16223 145 FMG 147 (153)
Q Consensus 145 ~~~ 147 (153)
...
T Consensus 231 ~~~ 233 (322)
T 3qlj_A 231 TVF 233 (322)
T ss_dssp CSC
T ss_pred hhh
Confidence 653
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-17 Score=126.62 Aligned_cols=97 Identities=23% Similarity=0.234 Sum_probs=83.6
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||..+ ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 96 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 160 (260)
T 2zat_A 96 VSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPN--------------- 160 (260)
T ss_dssp EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT---------------
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCC---------------
Confidence 58998642 23789999999999999999999999954 489999999887 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+++|++..
T Consensus 161 ----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~ 203 (260)
T 2zat_A 161 ----------------------------LGPYNVSKTALLGLTKNLAVELAPR----NIRVNCLAPGLIKTNFSQ 203 (260)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSSTTH
T ss_pred ----------------------------chhHHHHHHHHHHHHHHHHHHhccc----CeEEEEEEECcccCccch
Confidence 3689999999999999999999988 999999999999999864
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.6e-17 Score=127.93 Aligned_cols=99 Identities=23% Similarity=0.195 Sum_probs=85.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------- 147 (281)
T 3m1a_A 84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAG---------------- 147 (281)
T ss_dssp EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT----------------
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCC----------------
Confidence 58998752 23789999999999999999999999964 589999999887 43222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.++++++.++.+. ||++++|+||+|+|++....
T Consensus 148 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~~ 192 (281)
T 3m1a_A 148 ---------------------------FSAYSATKAALEQLSEGLADEVAPF----GIKVLIVEPGAFRTNLFGKG 192 (281)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCTTTCCC
T ss_pred ---------------------------chHHHHHHHHHHHHHHHHHHHhhcc----CcEEEEEecCcccccccccc
Confidence 4789999999999999999999988 99999999999999997643
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.5e-17 Score=127.72 Aligned_cols=99 Identities=25% Similarity=0.277 Sum_probs=80.2
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-----CccEEEecCCcc-cccccccHHHHhhhhcc
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-----HARVVNLSSSAG-HLSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~ 66 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 109 i~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 176 (272)
T 4e3z_A 109 VNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT------------ 176 (272)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT------------
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC------------
Confidence 58999753 23789999999999999999999999964 589999999887 43221
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
....|++||++++.|+++++.|+.+. ||+|++|+||+|+|++...
T Consensus 177 ------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 221 (272)
T 4e3z_A 177 ------------------------------QYVDYAASKAAIDTFTIGLAREVAAE----GIRVNAVRPGIIETDLHAS 221 (272)
T ss_dssp ------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBC------
T ss_pred ------------------------------CcchhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEecCCCcCCcccc
Confidence 13679999999999999999999988 9999999999999998754
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-17 Score=128.25 Aligned_cols=96 Identities=26% Similarity=0.303 Sum_probs=83.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 147 (255)
T 2q2v_A 84 VNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTG---------------- 147 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCC----------------
Confidence 58998753 24789999999999999999999999964 489999999887 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|++||+++..++++++.|+.+. ||+|++|+||+|+|++.
T Consensus 148 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~ 189 (255)
T 2q2v_A 148 ---------------------------KAAYVAAKHGVVGLTKVVGLETATS----NVTCNAICPGWVLTPLV 189 (255)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHTTTS----SEEEEEEEESSBCCHHH
T ss_pred ---------------------------chhHHHHHHHHHHHHHHHHHHhccc----CcEEEEEeeCCCcCcch
Confidence 4689999999999999999999988 99999999999999874
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=7.5e-18 Score=130.71 Aligned_cols=98 Identities=22% Similarity=0.146 Sum_probs=84.5
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (153)
|||||.... .++|++++++|+.|++.+++.++|.|+++++||++||..+...+.
T Consensus 85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------------- 145 (263)
T 2a4k_A 85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFG------------------- 145 (263)
T ss_dssp EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHH-------------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCCC-------------------
Confidence 588886532 378999999999999999999999994478999999988762221
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 74 TDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..++++++.|+.+. ||+|++|+||+|+|+|...
T Consensus 146 ------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 189 (263)
T 2a4k_A 146 ------------------------LAHYAAGKLGVVGLARTLALELARK----GVRVNVLLPGLIQTPMTAG 189 (263)
T ss_dssp ------------------------HHHHHHCSSHHHHHHHHHHHHHTTT----TCEEEEEEECSBCCGGGTT
T ss_pred ------------------------cHHHHHHHHHHHHHHHHHHHHhhhh----CcEEEEEEeCcCcCchhhh
Confidence 3689999999999999999999988 9999999999999998764
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-17 Score=128.12 Aligned_cols=97 Identities=24% Similarity=0.328 Sum_probs=83.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 92 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 155 (260)
T 2ae2_A 92 VNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY---------------- 155 (260)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC----------------
Confidence 58999753 23789999999999999999999999954 489999999877 33222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+++|++..
T Consensus 156 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~ 198 (260)
T 2ae2_A 156 ---------------------------EAVYGATKGAMDQLTRCLAFEWAKD----NIRVNGVGPGVIATSLVE 198 (260)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEECSBCSHHHH
T ss_pred ---------------------------cchHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEecCCCCCcchh
Confidence 3689999999999999999999988 999999999999998753
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=9.3e-18 Score=128.53 Aligned_cols=128 Identities=20% Similarity=0.157 Sum_probs=81.3
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCC--ccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRH--ARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~--g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
|||||.....+.|++++++|+.|++.+++.++|.|++. ++||++||..+...+.........+...+ .+......+
T Consensus 67 v~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 144 (257)
T 1fjh_A 67 VLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGE--EAKARAIVE 144 (257)
T ss_dssp EECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTC--HHHHHHHHH
T ss_pred EECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccc--hhhhhhhhh
Confidence 58999876345699999999999999999999999753 89999999887421111111111111110 000000000
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
.+ . . . .....|+.||++++.+++.++.++.+. ||+|++|+||+|+|+|.+..
T Consensus 145 ~~---~-~------~--~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~ 196 (257)
T 1fjh_A 145 HA---G-E------Q--GGNLAYAGSKNALTVAVRKRAAAWGEA----GVRLNTIAPGATETPLLQAG 196 (257)
T ss_dssp TC---C-T------T--HHHHHHHHHHHHHHHHHHHTHHHHHHT----TCEEEEEEECC---------
T ss_pred cc---c-C------C--CCccHHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEeeCCCCCccchhh
Confidence 00 0 0 0 013689999999999999999999888 99999999999999997654
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=9.9e-18 Score=128.97 Aligned_cols=97 Identities=10% Similarity=0.092 Sum_probs=83.4
Q ss_pred CCCCCCC-c-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTV-P-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~-~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.. . ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 77 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 141 (254)
T 1zmt_A 77 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE--------------- 141 (254)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT---------------
T ss_pred EECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCC---------------
Confidence 5899875 2 23789999999999999999999999964 589999999887 43222
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc---------cC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV---------AT 140 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v---------~T 140 (153)
...|++||++++.++++++.|+.+. ||+||+|+||+| +|
T Consensus 142 ----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~~~~~~~~~~T 189 (254)
T 1zmt_A 142 ----------------------------LSTYTSARAGACTLANALSKELGEY----NIPVFAIGPNYLHSEDSPYFYPT 189 (254)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCCEEEEEESSBCCBTCCSSCBH
T ss_pred ----------------------------chHHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCccccccccccCCC
Confidence 4789999999999999999999988 999999999999 77
Q ss_pred CCCC
Q psy16223 141 NMSS 144 (153)
Q Consensus 141 ~~~~ 144 (153)
+|..
T Consensus 190 ~~~~ 193 (254)
T 1zmt_A 190 EPWK 193 (254)
T ss_dssp HHHT
T ss_pred cccc
Confidence 7654
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-17 Score=129.11 Aligned_cols=98 Identities=27% Similarity=0.314 Sum_probs=80.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------------- 155 (253)
T 2nm0_A 92 IANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAG---------------- 155 (253)
T ss_dssp EEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHH----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC----------------
Confidence 58898753 23679999999999999999999999964 589999999887 43222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..+++.++.|+.+. ||++|+|+||+|+|+|...
T Consensus 156 ---------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~ 199 (253)
T 2nm0_A 156 ---------------------------QANYAASKAGLVGFARSLARELGSR----NITFNVVAPGFVDTDMTKV 199 (253)
T ss_dssp ---------------------------HHHHHHHHHHHHHHHHHHHHHHCSS----SEEEEEEEECSBCC-----
T ss_pred ---------------------------cHHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeCcCcCcchhh
Confidence 3689999999999999999999988 9999999999999999764
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=3.4e-17 Score=127.10 Aligned_cols=99 Identities=22% Similarity=0.222 Sum_probs=81.5
Q ss_pred CCCCCCCc-----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccc
Q psy16223 1 MNRASTVP-----------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDC 67 (153)
Q Consensus 1 innag~~~-----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~ 67 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ .....
T Consensus 91 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 157 (278)
T 1spx_A 91 VNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATP------------- 157 (278)
T ss_dssp EECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCT-------------
T ss_pred EECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCC-------------
Confidence 58998752 55789999999999999999999999964 589999999876 42100
Q ss_pred cChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
....|++||++++.++++++.|+.+. ||+|++|+||+|+|++...
T Consensus 158 -----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 202 (278)
T 1spx_A 158 -----------------------------DFPYYSIAKAAIDQYTRNTAIDLIQH----GIRVNSISPGLVATGFGSA 202 (278)
T ss_dssp -----------------------------TSHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCCCC---
T ss_pred -----------------------------CccHHHHHHHHHHHHHHHHHHHHHhc----CcEEEEEecCcccCccccc
Confidence 13689999999999999999999988 9999999999999998754
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.70 E-value=8e-18 Score=129.40 Aligned_cols=99 Identities=14% Similarity=0.038 Sum_probs=85.0
Q ss_pred CCCCCCC--------ccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTV--------PFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~--------~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||.. ...++|++++++|+.|++.+++.++|.|+++++||++||..+ ...+.
T Consensus 92 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------- 154 (251)
T 3orf_A 92 VCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSG----------------- 154 (251)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-----------------
T ss_pred EECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCC-----------------
Confidence 5899863 123789999999999999999999999988899999999887 43322
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc--cccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD--CELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~--~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.++++++.++. +. ||+|++|+||+|+|+|.+..
T Consensus 155 --------------------------~~~Y~~sKaa~~~~~~~la~e~~~~~~----gi~v~~v~PG~v~t~~~~~~ 201 (251)
T 3orf_A 155 --------------------------MIAYGATKAATHHIIKDLASENGGLPA----GSTSLGILPVTLDTPTNRKY 201 (251)
T ss_dssp --------------------------BHHHHHHHHHHHHHHHHHTSTTSSSCT----TCEEEEEEESCBCCHHHHHH
T ss_pred --------------------------CchhHHHHHHHHHHHHHHHHHhcccCC----CcEEEEEecCcCcCcchhhh
Confidence 47899999999999999999986 66 89999999999999986543
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=3e-17 Score=126.11 Aligned_cols=97 Identities=12% Similarity=0.155 Sum_probs=83.9
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 149 (249)
T 1o5i_A 86 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN---------------- 149 (249)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCC----------------
Confidence 589987532 3789999999999999999999999964 489999999887 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..++++++.|+.+. ||++++|+||+|+|++..
T Consensus 150 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~ 192 (249)
T 1o5i_A 150 ---------------------------LYTSNSARMALTGFLKTLSFEVAPY----GITVNCVAPGWTETERVK 192 (249)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTHH
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCCCccCccc
Confidence 4789999999999999999999988 999999999999999853
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.3e-17 Score=126.74 Aligned_cols=98 Identities=18% Similarity=0.204 Sum_probs=84.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhc---CCccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLR---RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~---~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.+++.|. .+++||++||..+ ...+.
T Consensus 109 i~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 173 (267)
T 4iiu_A 109 VSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRG--------------- 173 (267)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTT---------------
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCC---------------
Confidence 58998753 2378999999999999999999998884 3589999999887 44322
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..++++++.|+.+. ||+|++|+||+|+|+|...
T Consensus 174 ----------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 217 (267)
T 4iiu_A 174 ----------------------------QVNYSAAKAGIIGATKALAIELAKR----KITVNCIAPGLIDTGMIEM 217 (267)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSTTCCC
T ss_pred ----------------------------CchhHHHHHHHHHHHHHHHHHHhhc----CeEEEEEEEeeecCCcccc
Confidence 4789999999999999999999988 9999999999999999864
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.5e-17 Score=127.32 Aligned_cols=97 Identities=21% Similarity=0.285 Sum_probs=84.2
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 149 (260)
T 1nff_A 86 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA---------------- 149 (260)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCC----------------
Confidence 58998753 24789999999999999999999999964 589999999887 43221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+.+. ||++++|+||+|+|++..
T Consensus 150 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~ 192 (260)
T 1nff_A 150 ---------------------------CHGYTATKFAVRGLTKSTALELGPS----GIRVNSIHPGLVKTPMTD 192 (260)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCSGGGT
T ss_pred ---------------------------chhHHHHHHHHHHHHHHHHHHhCcc----CcEEEEEEeCCCCCCccc
Confidence 3689999999999999999999988 999999999999999864
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.9e-17 Score=131.30 Aligned_cols=98 Identities=17% Similarity=0.183 Sum_probs=79.2
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCccc-ccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGH-LSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .|+||++||..+. ..+.
T Consensus 92 VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~---------------- 155 (324)
T 3u9l_A 92 IHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPP---------------- 155 (324)
T ss_dssp EECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCS----------------
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCC----------------
Confidence 68999752 23789999999999999999999999964 5899999998874 2211
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....|++||++++.++++++.|+.+. ||+|++|+||+|+|++..
T Consensus 156 --------------------------~~~~Y~asKaa~~~~~~~la~el~~~----gI~v~~v~PG~v~t~~~~ 199 (324)
T 3u9l_A 156 --------------------------YLAPYFAAKAAMDAIAVQYARELSRW----GIETSIIVPGAFTSGTNH 199 (324)
T ss_dssp --------------------------SCHHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECCC------
T ss_pred --------------------------cchhHHHHHHHHHHHHHHHHHHhhhh----CcEEEEEECCccccCchh
Confidence 13679999999999999999999988 999999999999988754
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.8e-17 Score=126.77 Aligned_cols=96 Identities=17% Similarity=0.163 Sum_probs=83.2
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 90 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 153 (263)
T 3ai3_A 90 VNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWY---------------- 153 (263)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC----------------
Confidence 58998753 34789999999999999999999999954 489999999887 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|++||+++..++++++.|+.+. ||+|++|+||+|+|++.
T Consensus 154 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~ 195 (263)
T 3ai3_A 154 ---------------------------EPIYNVTKAALMMFSKTLATEVIKD----NIRVNCINPGLILTPDW 195 (263)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCHHH
T ss_pred ---------------------------cchHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecCcccCcch
Confidence 4689999999999999999999988 99999999999999874
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-17 Score=130.18 Aligned_cols=110 Identities=30% Similarity=0.323 Sum_probs=82.1
Q ss_pred CCCCCCCc-----cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCccc-ccccccHHHHhhhhccccChHHHH
Q psy16223 1 MNRASTVP-----FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGH-LSQITNLELKKRLMEDCVSERQLT 74 (153)
Q Consensus 1 innag~~~-----~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 74 (153)
|||||+.. ..++|++++++|+.|++.+++.++|.|.+ +||++||..+. ..... .++.
T Consensus 91 v~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--riv~isS~~~~~~~~~~----------~~~~----- 153 (291)
T 3rd5_A 91 INNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD--RVVTVSSMAHWPGRINL----------EDLN----- 153 (291)
T ss_dssp EECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE--EEEEECCGGGTTCCCCS----------SCTT-----
T ss_pred EECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--heeEeechhhccCCCCc----------cccc-----
Confidence 58999763 23789999999999999999999999985 89999998873 21110 0000
Q ss_pred HHHHHHHHHhhcCCCccccCCC-CCchhHHhHHHHHHHHHHHHHHhccccCCCC--eEEEEeeCCcccCCCCCCCC
Q psy16223 75 DMMYEFMDITKEHPRAHVAKGW-PDSAYAVSKIGVNLLTRIYQKKFDCELGNQD--KVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~g--i~v~~v~PG~v~T~~~~~~~ 147 (153)
.....+ +...|++||++++.+++.++.|+... | |+|++|+||+|+|+|.+...
T Consensus 154 ----------------~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----g~~i~v~~v~PG~v~T~~~~~~~ 209 (291)
T 3rd5_A 154 ----------------WRSRRYSPWLAYSQSKLANLLFTSELQRRLTAA----GSPLRALAAHPGYSHTNLQGASG 209 (291)
T ss_dssp ----------------CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCCEEEEECCSGGGSCC-----
T ss_pred ----------------ccccCCCCcchHHHHHHHHHHHHHHHHHHHhhC----CCCEEEEEeeCCCCccccccccc
Confidence 000011 13689999999999999999999987 6 99999999999999987653
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.9e-17 Score=132.12 Aligned_cols=97 Identities=13% Similarity=0.121 Sum_probs=83.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||+.. ..++|+.++++|+.|++.+++.++|.|++ .++||++||..+ .+.+.
T Consensus 97 VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~---------------- 160 (319)
T 1gz6_A 97 VNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG---------------- 160 (319)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC----------------
Confidence 68999753 23789999999999999999999999964 589999999877 43221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..|++.++.|+.+. ||+||+|+||++ |+|...
T Consensus 161 ---------------------------~~~Y~aSK~a~~~~~~~la~el~~~----gI~vn~v~PG~~-t~~~~~ 203 (319)
T 1gz6_A 161 ---------------------------QANYSAAKLGLLGLANTLVIEGRKN----NIHCNTIAPNAG-SRMTET 203 (319)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEEECC-STTTGG
T ss_pred ---------------------------CHHHHHHHHHHHHHHHHHHHHhccc----CEEEEEEeCCCc-cccccc
Confidence 4789999999999999999999988 999999999998 887653
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.7e-17 Score=125.95 Aligned_cols=97 Identities=24% Similarity=0.298 Sum_probs=68.3
Q ss_pred CCCCCCC----------ccHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhcccc
Q psy16223 1 MNRASTV----------PFAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~----------~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||.. ...++|++++++|+.|++.+++.++|.|++ .++||++||..+...
T Consensus 91 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 154 (253)
T 3qiv_A 91 VNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY---------------- 154 (253)
T ss_dssp EECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------------
T ss_pred EECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC----------------
Confidence 5899873 134789999999999999999999999954 589999999876421
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.++++++.|+.+. ||+|++|+||+|+|++.+..
T Consensus 155 -----------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~ 199 (253)
T 3qiv_A 155 -----------------------------SNYYGLAKVGINGLTQQLSRELGGR----NIRINAIAPGPIDTEANRTT 199 (253)
T ss_dssp ----------------------------------CCHHHHHHHHHHHHHHTTTT----TEEEEEEEC-----------
T ss_pred -----------------------------CchhHHHHHHHHHHHHHHHHHHhhc----CeEEEEEEecCCcccchhhc
Confidence 2679999999999999999999888 99999999999999987654
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=2.6e-17 Score=125.91 Aligned_cols=98 Identities=21% Similarity=0.187 Sum_probs=83.6
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 142 (246)
T 2ag5_A 79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV---------------- 142 (246)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT----------------
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCC----------------
Confidence 589997532 3789999999999999999999999954 589999999887 33220
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....|++||++++.++++++.|+.+. ||++++|+||+|+|++..
T Consensus 143 --------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~ 186 (246)
T 2ag5_A 143 --------------------------NRCVYSTTKAAVIGLTKSVAADFIQQ----GIRCNCVCPGTVDTPSLQ 186 (246)
T ss_dssp --------------------------TBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESCEECHHHH
T ss_pred --------------------------CCccHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEeeCcCcCcchh
Confidence 14689999999999999999999988 999999999999998743
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.9e-17 Score=125.91 Aligned_cols=88 Identities=16% Similarity=0.103 Sum_probs=76.9
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHP 88 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (153)
++|++++++|+.|++.+++.++|.|++ .++||++||..+....
T Consensus 112 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------------- 156 (260)
T 2qq5_A 112 SMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM----------------------------------- 156 (260)
T ss_dssp THHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-----------------------------------
T ss_pred HHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-----------------------------------
Confidence 679999999999999999999999964 4899999998774211
Q ss_pred CccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 89 RAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 89 ~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
....|++||++++.++++++.|+.+. ||+||+|+||+|+|+|...
T Consensus 157 --------~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~ 201 (260)
T 2qq5_A 157 --------FNVPYGVGKAACDKLAADCAHELRRH----GVSCVSLWPGIVQTELLKE 201 (260)
T ss_dssp --------SSHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEECCCSCTTTC--
T ss_pred --------CCCchHHHHHHHHHHHHHHHHHhccC----CeEEEEEecCccccHHHHH
Confidence 13689999999999999999999988 9999999999999999754
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=5.2e-17 Score=128.05 Aligned_cols=97 Identities=23% Similarity=0.179 Sum_probs=83.4
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhc-CCccEEEecCCcc-ccc-ccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLR-RHARVVNLSSSAG-HLS-QITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~-~~g~iv~~sS~~~-~~~-~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+ ++++||++||..+ ... +.
T Consensus 111 vnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~-------------- 176 (297)
T 1xhl_A 111 VNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSG-------------- 176 (297)
T ss_dssp EECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTT--------------
T ss_pred EECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCC--------------
Confidence 58998642 2378999999999999999999999995 3589999999887 332 21
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..++++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 177 -----------------------------~~~Y~asKaa~~~l~~~la~el~~~----gI~v~~v~PG~v~T~~~~ 219 (297)
T 1xhl_A 177 -----------------------------YPYYACAKAALDQYTRCTAIDLIQH----GVRVNSVSPGAVATGFMG 219 (297)
T ss_dssp -----------------------------SHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCSSHHH
T ss_pred -----------------------------cchHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeeCCCcCcccc
Confidence 4689999999999999999999988 999999999999999854
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=6.2e-17 Score=122.68 Aligned_cols=99 Identities=21% Similarity=0.220 Sum_probs=82.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ ++++|+++|..+ ...+.
T Consensus 85 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~----------------- 147 (235)
T 3l77_A 85 VANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPY----------------- 147 (235)
T ss_dssp EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTT-----------------
T ss_pred EECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCC-----------------
Confidence 58998753 34789999999999999999999999954 688999998877 43322
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMGN 148 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~~ 148 (153)
...|++||+++..++++++ +... ||+|++|+||+|+|+|......
T Consensus 148 --------------------------~~~Y~~sKaa~~~~~~~l~--~~~~----~i~v~~v~PG~v~T~~~~~~~~ 192 (235)
T 3l77_A 148 --------------------------GGGYVSTKWAARALVRTFQ--IENP----DVRFFELRPGAVDTYFGGSKPG 192 (235)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHH--HHCT----TSEEEEEEECSBSSSTTTCCSC
T ss_pred --------------------------cchHHHHHHHHHHHHHHHh--hcCC----CeEEEEEeCCccccccccccCC
Confidence 3689999999999999994 4455 8999999999999999877643
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=4e-17 Score=127.23 Aligned_cols=97 Identities=23% Similarity=0.194 Sum_probs=83.2
Q ss_pred CCCCCCCc-----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-ccc-ccccHHHHhhhhcc
Q psy16223 1 MNRASTVP-----------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLS-QITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~-----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~-~~~~~~~~~~~~~~ 66 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ ... +.
T Consensus 91 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------ 158 (280)
T 1xkq_A 91 VNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPD------------ 158 (280)
T ss_dssp EECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCS------------
T ss_pred EECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCc------------
Confidence 58998642 12679999999999999999999999953 589999999877 332 21
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..++++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 159 -------------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~ 201 (280)
T 1xkq_A 159 -------------------------------FLYYAIAKAALDQYTRSTAIDLAKF----GIRVNSVSPGMVETGFTN 201 (280)
T ss_dssp -------------------------------SHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCBCSSHHH
T ss_pred -------------------------------ccHHHHHHHHHHHHHHHHHHHhccC----CeEEEEEeeCcCcCCccc
Confidence 4689999999999999999999988 999999999999999854
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=7.8e-17 Score=124.09 Aligned_cols=101 Identities=20% Similarity=0.221 Sum_probs=83.5
Q ss_pred CCCCCCC---------ccHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCccc-ccccccHHHHhhhhcccc
Q psy16223 1 MNRASTV---------PFAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGH-LSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~---------~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~ 68 (153)
|||||+. ...++|++++++|+.|++.+++.++|.|++ .++||++||.... ..+.
T Consensus 90 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-------------- 155 (264)
T 3i4f_A 90 INNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGW-------------- 155 (264)
T ss_dssp ECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCC--------------
T ss_pred EECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCC--------------
Confidence 5899942 123789999999999999999999999964 4899999997432 2111
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
.....|++||++++.++++++.|+.+. ||+|++|+||+|+|+|....
T Consensus 156 ---------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~ 202 (264)
T 3i4f_A 156 ---------------------------IYRSAFAAAKVGLVSLTKTVAYEEAEY----GITANMVCPGDIIGEMKEAT 202 (264)
T ss_dssp ---------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCCCGGGGSCC
T ss_pred ---------------------------CCCchhHHHHHHHHHHHHHHHHHhhhc----CcEEEEEccCCccCccchhc
Confidence 114689999999999999999999988 99999999999999997654
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=2.6e-17 Score=127.96 Aligned_cols=97 Identities=24% Similarity=0.277 Sum_probs=83.4
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 150 (270)
T 1yde_A 87 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ---------------- 150 (270)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT----------------
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCC----------------
Confidence 58998742 23779999999999999999999999964 689999999876 43222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..++++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 151 ---------------------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~Pg~v~t~~~~ 193 (270)
T 1yde_A 151 ---------------------------AVPYVATKGAVTAMTKALALDESPY----GVRVNCISPGNIWTPLWE 193 (270)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCCHHHH
T ss_pred ---------------------------CcccHHHHHHHHHHHHHHHHHhhhh----CcEEEEEEeCccccchhh
Confidence 3689999999999999999999988 999999999999998743
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=3.2e-17 Score=125.76 Aligned_cols=97 Identities=24% Similarity=0.287 Sum_probs=84.0
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcC-----CccEEEecCCcc-cccccccHHHHhhhhccccChHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRR-----HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLT 74 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (153)
|||||.. ..++|++++++|+.|++.+++.++|.|.+ +++||++||..+ ...+.
T Consensus 89 v~~Ag~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------------- 147 (254)
T 1sby_A 89 INGAGIL-DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ-------------------- 147 (254)
T ss_dssp EECCCCC-CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------------
T ss_pred EECCccC-CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCC--------------------
Confidence 5899986 45679999999999999999999999954 478999999887 33221
Q ss_pred HHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 75 DMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.++++++.++... ||+|++|+||+|+|+|...
T Consensus 148 -----------------------~~~Y~~sK~a~~~~~~~la~~~~~~----gi~v~~v~Pg~v~t~~~~~ 191 (254)
T 1sby_A 148 -----------------------VPVYSASKAAVVSFTNSLAKLAPIT----GVTAYSINPGITRTPLVHT 191 (254)
T ss_dssp -----------------------SHHHHHHHHHHHHHHHHHHHHHHHH----SEEEEEEEECSEESHHHHS
T ss_pred -----------------------chHHHHHHHHHHHHHHHHHHHhccC----CeEEEEEecCCccCccccc
Confidence 3689999999999999999999877 8999999999999998654
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=6.9e-17 Score=122.41 Aligned_cols=111 Identities=23% Similarity=0.343 Sum_probs=79.0
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-------------CccEEEecCCcc-cccccccHH
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-------------HARVVNLSSSAG-HLSQITNLE 58 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-------------~g~iv~~sS~~~-~~~~~~~~~ 58 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 86 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---- 161 (250)
T 1yo6_A 86 INNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT---- 161 (250)
T ss_dssp EECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC----
T ss_pred EECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc----
Confidence 58888764 24789999999999999999999999842 589999999877 32210
Q ss_pred HHhhhhccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc
Q psy16223 59 LKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV 138 (153)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v 138 (153)
.... ..+...|++||+++..++++++.++.+. ||++++|+||+|
T Consensus 162 ------------------------------~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v 205 (250)
T 1yo6_A 162 ------------------------------SGSA--QFPVLAYRMSKAAINMFGRTLAVDLKDD----NVLVVNFCPGWV 205 (250)
T ss_dssp ------------------------------STTS--SSCBHHHHHHHHHHHHHHHHHHHHTGGG----TCEEEEEECCCC
T ss_pred ------------------------------cccc--cCCccHHHHHHHHHHHHHHHHHHHhccC----CeEEEEEcCCce
Confidence 0000 0124689999999999999999999988 999999999999
Q ss_pred cCCCCCCCCCCCC
Q psy16223 139 ATNMSSFMGNVNI 151 (153)
Q Consensus 139 ~T~~~~~~~~~~~ 151 (153)
+|+|.......++
T Consensus 206 ~t~~~~~~~~~~~ 218 (250)
T 1yo6_A 206 QTNLGGKNAALTV 218 (250)
T ss_dssp -------------
T ss_pred ecCCCCCCCCCCH
Confidence 9999875443333
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.5e-17 Score=130.12 Aligned_cols=98 Identities=19% Similarity=0.268 Sum_probs=82.3
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCccc-ccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGH-LSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+. ..+.
T Consensus 134 VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~---------------- 197 (346)
T 3kvo_A 134 VNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWF---------------- 197 (346)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGT----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCC----------------
Confidence 68999752 23789999999999999999999999976 3899999998873 3111
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCc-ccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGY-VATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~-v~T~~~~ 144 (153)
-....|++||+++.+|+++++.|+. . ||+||+|+||+ ++|++.+
T Consensus 198 -------------------------~~~~~Y~aSKaal~~l~~~la~e~~-~----gIrvn~v~PG~~i~T~~~~ 242 (346)
T 3kvo_A 198 -------------------------KQHCAYTIAKYGMSMYVLGMAEEFK-G----EIAVNALWPKTAIHTAAMD 242 (346)
T ss_dssp -------------------------SSSHHHHHHHHHHHHHHHHHHHHTT-T----TCEEEEEECSBCBCCHHHH
T ss_pred -------------------------CCchHHHHHHHHHHHHHHHHHHHhc-C----CcEEEEEeCCCccccHHHH
Confidence 0147899999999999999999998 7 89999999995 9998754
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-16 Score=122.84 Aligned_cols=99 Identities=16% Similarity=0.162 Sum_probs=81.5
Q ss_pred CCCCCCC-------------ccHHHHHHHHhhhhhHHHHHHHHHhhhhcC--------CccEEEecCCcc-cccccccHH
Q psy16223 1 MNRASTV-------------PFAIQAEKTILTNYLGLVRTCVFLFPLLRR--------HARVVNLSSSAG-HLSQITNLE 58 (153)
Q Consensus 1 innag~~-------------~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--------~g~iv~~sS~~~-~~~~~~~~~ 58 (153)
|||||.. ...++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 91 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---- 166 (265)
T 2o23_A 91 VNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG---- 166 (265)
T ss_dssp EECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT----
T ss_pred EECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCC----
Confidence 5888864 234789999999999999999999999964 378999999877 33221
Q ss_pred HHhhhhccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc
Q psy16223 59 LKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV 138 (153)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v 138 (153)
...|++||++++.+++.++.++.+. ||++++|+||+|
T Consensus 167 ---------------------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v 203 (265)
T 2o23_A 167 ---------------------------------------QAAYSASKGGIVGMTLPIARDLAPI----GIRVMTIAPGLF 203 (265)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCB
T ss_pred ---------------------------------------CchhHHHHHHHHHHHHHHHHHHhhc----CcEEEEEEeccc
Confidence 4789999999999999999999988 999999999999
Q ss_pred cCCCCCCC
Q psy16223 139 ATNMSSFM 146 (153)
Q Consensus 139 ~T~~~~~~ 146 (153)
+|++....
T Consensus 204 ~t~~~~~~ 211 (265)
T 2o23_A 204 GTPLLTSL 211 (265)
T ss_dssp CCC-----
T ss_pred cCcccccc
Confidence 99997653
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.68 E-value=7e-17 Score=124.55 Aligned_cols=100 Identities=17% Similarity=0.247 Sum_probs=83.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ .....
T Consensus 106 i~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 169 (267)
T 3gdg_A 106 IANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP---------------- 169 (267)
T ss_dssp EECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS----------------
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC----------------
Confidence 58999753 33789999999999999999999999964 589999999887 32210
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
-....|++||++++.++++++.|+.+ .|+||+|+||+|+|+|.+..
T Consensus 170 -------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~-----~i~v~~v~PG~v~t~~~~~~ 215 (267)
T 3gdg_A 170 -------------------------QEQTSYNVAKAGCIHMARSLANEWRD-----FARVNSISPGYIDTGLSDFV 215 (267)
T ss_dssp -------------------------SCCHHHHHHHHHHHHHHHHHHHHTTT-----TCEEEEEEECCEECSCGGGS
T ss_pred -------------------------CCCCcchHHHHHHHHHHHHHHHHhcc-----CcEEEEEECCccccchhhhC
Confidence 01478999999999999999999975 39999999999999997643
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.68 E-value=4.6e-17 Score=135.75 Aligned_cols=100 Identities=27% Similarity=0.253 Sum_probs=82.3
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||+... .++|++++++|+.|++.+++.++|.|.. .++||++||..+ .+.+.
T Consensus 293 V~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g---------------- 356 (454)
T 3u0b_A 293 VNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRG---------------- 356 (454)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTT----------------
T ss_pred EECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCC----------------
Confidence 689998632 3789999999999999999999999864 589999999887 44332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|+++|++++.|+++++.++... ||+||+|+||+|+|+|.....
T Consensus 357 ---------------------------~~~YaasKaal~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~~ 402 (454)
T 3u0b_A 357 ---------------------------QTNYATTKAGMIGLAEALAPVLADK----GITINAVAPGFIETKMTEAIP 402 (454)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSBCC-------
T ss_pred ---------------------------CHHHHHHHHHHHHHHHHHHHHhhhc----CcEEEEEEcCcccChhhhhcc
Confidence 4789999999999999999999988 999999999999999987643
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=4.4e-17 Score=127.00 Aligned_cols=97 Identities=26% Similarity=0.316 Sum_probs=83.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhh--hcC--CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPL--LRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~--l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|++.+++.++|. |++ .++||++||..+ ...+.
T Consensus 104 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-------------- 169 (277)
T 2rhc_B 104 VNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH-------------- 169 (277)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTT--------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCC--------------
Confidence 58998752 23789999999999999999999999 854 489999999887 43222
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++..++++++.|+.+. ||+||+|+||+|+|+|..
T Consensus 170 -----------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~ 212 (277)
T 2rhc_B 170 -----------------------------AAPYSASKHGVVGFTKALGLELART----GITVNAVCPGFVETPMAA 212 (277)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHHTTT----EEEEEEEEECSBCSHHHH
T ss_pred -----------------------------CccHHHHHHHHHHHHHHHHHHHHHh----CcEEEEEecCcCcCchhh
Confidence 4789999999999999999999988 999999999999998743
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=9.5e-17 Score=123.52 Aligned_cols=106 Identities=25% Similarity=0.304 Sum_probs=86.8
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-------------CccEEEecCCccc-ccccccHH
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-------------HARVVNLSSSAGH-LSQITNLE 58 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-------------~g~iv~~sS~~~~-~~~~~~~~ 58 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+. ..+.
T Consensus 107 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---- 182 (267)
T 1sny_A 107 FNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNT---- 182 (267)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCC----
T ss_pred EECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCCC----
Confidence 58898754 23789999999999999999999999953 4799999998773 2210
Q ss_pred HHhhhhccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc
Q psy16223 59 LKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV 138 (153)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v 138 (153)
......|++||+++..+++.++.++.+. ||++++|+||+|
T Consensus 183 ------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v 222 (267)
T 1sny_A 183 ------------------------------------DGGMYAYRTSKSALNAATKSLSVDLYPQ----RIMCVSLHPGWV 222 (267)
T ss_dssp ------------------------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEECCCSB
T ss_pred ------------------------------------CCCchHHHHHHHHHHHHHHHHHHHhhcC----CcEEEEeCCcce
Confidence 0013689999999999999999999988 999999999999
Q ss_pred cCCCCCCCCCCC
Q psy16223 139 ATNMSSFMGNVN 150 (153)
Q Consensus 139 ~T~~~~~~~~~~ 150 (153)
+|+|.......+
T Consensus 223 ~t~~~~~~~~~~ 234 (267)
T 1sny_A 223 KTDMGGSSAPLD 234 (267)
T ss_dssp CSTTTCTTCSBC
T ss_pred ecCCCCCCCCCC
Confidence 999987544433
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.67 E-value=9.1e-17 Score=125.01 Aligned_cols=90 Identities=22% Similarity=0.174 Sum_probs=79.2
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhhcC--------CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 10 AIQAEKTILTNYLGLVRTCVFLFPLLRR--------HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 10 ~~~~~~~~~vN~~g~~~l~~~~lp~l~~--------~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
.++|++++++|+.|++.+++.++|.|.+ +++||++||..+ ...+.
T Consensus 130 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------------------- 183 (281)
T 3ppi_A 130 MGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIG-------------------------- 183 (281)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTT--------------------------
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCC--------------------------
Confidence 3679999999999999999999999953 579999999988 44322
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.|+++++.|+.+. ||+|++|+||+|+|+|....
T Consensus 184 -----------------~~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~ 228 (281)
T 3ppi_A 184 -----------------QTAYAAAKAGVIGLTIAAARDLSSA----GIRVNTIAPGTMKTPIMESV 228 (281)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHTT
T ss_pred -----------------CcccHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCcCCchhhhcc
Confidence 4789999999999999999999988 99999999999999987543
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.4e-16 Score=119.78 Aligned_cols=99 Identities=25% Similarity=0.215 Sum_probs=85.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 91 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------------- 154 (244)
T 2bd0_A 91 VNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH---------------- 154 (244)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred EEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCC----------------
Confidence 58898753 23789999999999999999999999953 589999999887 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||++++.++++++.++... ||++++|+||+|+|+|....
T Consensus 155 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~~ 199 (244)
T 2bd0_A 155 ---------------------------SSIYCMSKFGQRGLVETMRLYARKC----NVRITDVQPGAVYTPMWGKV 199 (244)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCBCSTTTCCC
T ss_pred ---------------------------CchhHHHHHHHHHHHHHHHHHhhcc----CcEEEEEECCCccchhhhhc
Confidence 4789999999999999999999888 99999999999999998654
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.67 E-value=1e-16 Score=123.68 Aligned_cols=96 Identities=20% Similarity=0.172 Sum_probs=82.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|.+ .++||++||..+ ...+.
T Consensus 91 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 155 (263)
T 3ak4_A 91 CANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPL--------------- 155 (263)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT---------------
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCC---------------
Confidence 58998752 23789999999999999999999999953 489999999877 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|++||+++..++++++.|+.+. ||++++|+||+|+|++.
T Consensus 156 ----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~ 197 (263)
T 3ak4_A 156 ----------------------------LAHYSASKFAVFGWTQALAREMAPK----NIRVNCVCPGFVKTAMQ 197 (263)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBTTHHH
T ss_pred ----------------------------chhHHHHHHHHHHHHHHHHHHHhHc----CeEEEEEecccccChhh
Confidence 4689999999999999999999988 99999999999999874
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.66 E-value=7.3e-17 Score=133.27 Aligned_cols=92 Identities=17% Similarity=-0.025 Sum_probs=77.0
Q ss_pred HHHHHHHHhhhhhHHH-HHHHHHhh-hh-cCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhh
Q psy16223 10 AIQAEKTILTNYLGLV-RTCVFLFP-LL-RRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITK 85 (153)
Q Consensus 10 ~~~~~~~~~vN~~g~~-~l~~~~lp-~l-~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (153)
.++|++++++|..+.| .+++.+++ .| .++|+||++||..+ ...+.
T Consensus 207 ~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~------------------------------- 255 (422)
T 3s8m_A 207 AQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPI------------------------------- 255 (422)
T ss_dssp HHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHH-------------------------------
T ss_pred HHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCC-------------------------------
Confidence 4789999999999997 77887765 44 34689999999988 44332
Q ss_pred cCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 86 EHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 86 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
+....|++||+++.+++|+|+.|+.+. ||+||+|+||+|+|+|....
T Consensus 256 ----------~~~~aY~ASKaAl~~lTrsLA~Ela~~----GIRVNaVaPG~i~T~~~~~i 302 (422)
T 3s8m_A 256 ----------YWHGALGKAKVDLDRTAQRLNARLAKH----GGGANVAVLKSVVTQASAAI 302 (422)
T ss_dssp ----------HTSHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCTTGGGS
T ss_pred ----------ccchHHHHHHHHHHHHHHHHHHHhCcc----CEEEEEEEcCCCcChhhhcC
Confidence 012689999999999999999999998 99999999999999998654
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.4e-16 Score=118.36 Aligned_cols=98 Identities=24% Similarity=0.193 Sum_probs=76.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 83 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------------- 146 (234)
T 2ehd_A 83 VNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKG---------------- 146 (234)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTT----------------
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCC----------------
Confidence 58888653 23789999999999999999999999965 489999999887 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.+|+++..++++++.++... ||++++|+||+++|+|...
T Consensus 147 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 190 (234)
T 2ehd_A 147 ---------------------------GAAYNASKFGLLGLAGAAMLDLREA----NVRVVNVLPGSVDTGFAGN 190 (234)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEECC---------
T ss_pred ---------------------------CchhhHHHHHHHHHHHHHHHHHhhc----CcEEEEEEeCCCcCCcccc
Confidence 3689999999999999999999988 9999999999999998764
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.4e-16 Score=122.43 Aligned_cols=99 Identities=19% Similarity=0.217 Sum_probs=83.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------- 147 (253)
T 1hxh_A 85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQ----------------- 147 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTT-----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCC-----------------
Confidence 58999753 23789999999999999999999999965 489999999887 33221
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+.+. +. ||++++|+||+|+|++..
T Consensus 148 --------------------------~~~Y~~sK~a~~~~~~~la~e~~~~-~~-gi~v~~v~Pg~v~t~~~~ 192 (253)
T 1hxh_A 148 --------------------------YAGYSASKAAVSALTRAAALSCRKQ-GY-AIRVNSIHPDGIYTPMMQ 192 (253)
T ss_dssp --------------------------BHHHHHHHHHHHHHHHHHHHHHHHH-TC-CEEEEEEEESEECCHHHH
T ss_pred --------------------------CccHHHHHHHHHHHHHHHHHHhhhc-CC-CeEEEEEEeCCccCchhh
Confidence 3689999999999999999999764 11 599999999999999754
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.9e-16 Score=122.78 Aligned_cols=96 Identities=26% Similarity=0.267 Sum_probs=81.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 79 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------- 142 (264)
T 2dtx_A 79 VNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKN---------------- 142 (264)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTT----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCC----------------
Confidence 58998753 34789999999999999999999999965 489999999887 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.++++++.|+.+. |+||+|+||+++|+|..
T Consensus 143 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~-----i~vn~v~PG~v~t~~~~ 184 (264)
T 2dtx_A 143 ---------------------------ASAYVTSKHAVIGLTKSIALDYAPL-----LRCNAVCPATIDTPLVR 184 (264)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHTTT-----SEEEEEEECSBCSHHHH
T ss_pred ---------------------------chhHHHHHHHHHHHHHHHHHHhcCC-----cEEEEEEeCCCcCcchh
Confidence 4789999999999999999999653 99999999999998753
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.3e-16 Score=135.72 Aligned_cols=98 Identities=16% Similarity=0.171 Sum_probs=79.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||+.. ..++|++++++|+.|++.+++.++|.|++ .|+||++||..+ ...+.
T Consensus 107 VnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~---------------- 170 (613)
T 3oml_A 107 VNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG---------------- 170 (613)
T ss_dssp ECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTT----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC----------------
Confidence 69999853 23789999999999999999999999975 389999999887 44322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++.+|+++|+.|+.+. ||+||+|+||++ |+|....
T Consensus 171 ---------------------------~~~Y~asKaal~~lt~~la~e~~~~----gI~vn~v~Pg~~-t~~~~~~ 214 (613)
T 3oml_A 171 ---------------------------QVNYTAAKMGLIGLANTVAIEGARN----NVLCNVIVPTAA-SRMTEGI 214 (613)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEEC-------CCC
T ss_pred ---------------------------ChHHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEECCCC-Chhhhhc
Confidence 4789999999999999999999998 999999999974 6666543
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=1.6e-16 Score=122.78 Aligned_cols=96 Identities=24% Similarity=0.307 Sum_probs=81.8
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcC-----CccEEEecCCcc-cccccccHHHHhhhhccccChHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRR-----HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLT 74 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (153)
|||||... .++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 91 v~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------------- 149 (267)
T 2gdz_A 91 VNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ-------------------- 149 (267)
T ss_dssp EECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------------
T ss_pred EECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCC--------------------
Confidence 58999764 4679999999999999999999999964 479999999887 33221
Q ss_pred HHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHH--HHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 75 DMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIY--QKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l--~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.+++++ +.++.+. ||+|++|+||+|+|++..
T Consensus 150 -----------------------~~~Y~~sK~a~~~~~~~~ala~e~~~~----gi~v~~v~Pg~v~t~~~~ 194 (267)
T 2gdz_A 150 -----------------------QPVYCASKHGIVGFTRSAALAANLMNS----GVRLNAICPGFVNTAILE 194 (267)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHHHHHHHHHTC----CEEEEEEEESCBSSHHHH
T ss_pred -----------------------CchHHHHHHHHHHHHHHHHHHHHhccC----CcEEEEEecCcCcchhhh
Confidence 368999999999999985 6888877 899999999999999754
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.7e-16 Score=119.27 Aligned_cols=98 Identities=26% Similarity=0.240 Sum_probs=82.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|.+ .++||++||..+ ...+.
T Consensus 97 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 161 (264)
T 2pd6_A 97 VSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG--------------- 161 (264)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTT---------------
T ss_pred EECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCC---------------
Confidence 58898753 34789999999999999999999999964 479999999876 43221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.||+++..+++.++.++.+. ||++++|+||++.|++...
T Consensus 162 ----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 205 (264)
T 2pd6_A 162 ----------------------------QTNYAASKAGVIGLTQTAARELGRH----GIRCNSVLPGFIATPMTQK 205 (264)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSCC---
T ss_pred ----------------------------ChhhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeecccccchhh
Confidence 4789999999999999999999988 9999999999999998764
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=4.7e-16 Score=119.25 Aligned_cols=97 Identities=23% Similarity=0.217 Sum_probs=83.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------- 154 (261)
T 1gee_A 90 INNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL--------------- 154 (261)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT---------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCC---------------
Confidence 58898753 23789999999999999999999999964 579999999876 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.+++.++.++.+. ||++++|+||+|+|++..
T Consensus 155 ----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~ 197 (261)
T 1gee_A 155 ----------------------------FVHYAASKGGMKLMTETLALEYAPK----GIRVNNIGPGAINTPINA 197 (261)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSGGGH
T ss_pred ----------------------------ccHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEeeCCcCCchhh
Confidence 4789999999999999999999988 999999999999999854
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.63 E-value=6e-16 Score=119.09 Aligned_cols=98 Identities=24% Similarity=0.288 Sum_probs=74.2
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 97 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------------- 160 (266)
T 1xq1_A 97 INNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV---------------- 160 (266)
T ss_dssp EEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCC----------------
Confidence 58888753 34789999999999999999999999954 589999999877 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.++++++.++.+. ||++++|+||++.|++...
T Consensus 161 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 204 (266)
T 1xq1_A 161 ---------------------------GSIYSATKGALNQLARNLACEWASD----GIRANAVAPAVIATPLAEA 204 (266)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEECCSCC------
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHHhHh----CcEEEEEeeCCCccchhhh
Confidence 4789999999999999999999988 9999999999999998764
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=8.4e-16 Score=116.74 Aligned_cols=97 Identities=21% Similarity=0.257 Sum_probs=83.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------- 145 (244)
T 3d3w_A 81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN--------------- 145 (244)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT---------------
T ss_pred EECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCC---------------
Confidence 58898752 23789999999999999999999999953 589999999877 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.+++.++.|+.+. ||++++|+||+|+|++..
T Consensus 146 ----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~v~Pg~v~t~~~~ 188 (244)
T 3d3w_A 146 ----------------------------HSVYCSTKGALDMLTKVMALELGPH----KIRVNAVNPTVVMTSMGQ 188 (244)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBTTTTHH
T ss_pred ----------------------------CchHHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeccccccchh
Confidence 3689999999999999999999888 999999999999999854
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.1e-15 Score=116.37 Aligned_cols=98 Identities=28% Similarity=0.297 Sum_probs=83.7
Q ss_pred CCCCCCCc----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccc
Q psy16223 1 MNRASTVP----------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDC 67 (153)
Q Consensus 1 innag~~~----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~ 67 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 85 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------- 151 (250)
T 2cfc_A 85 VNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPG------------- 151 (250)
T ss_dssp EECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred EECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC-------------
Confidence 58888642 23689999999999999999999999964 489999999877 33221
Q ss_pred cChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 68 VSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.+++.++.++.+. ||++++|+||+|+|++...
T Consensus 152 ------------------------------~~~Y~~sK~a~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~ 195 (250)
T 2cfc_A 152 ------------------------------RSAYTTSKGAVLQLTKSVAVDYAGS----GIRCNAVCPGMIETPMTQW 195 (250)
T ss_dssp ------------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSTTTHH
T ss_pred ------------------------------chhHHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeCcCccCcccc
Confidence 4789999999999999999999988 9999999999999998653
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.5e-15 Score=117.33 Aligned_cols=100 Identities=14% Similarity=0.086 Sum_probs=84.8
Q ss_pred CCCCCCCcc---------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCccc-ccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVPF---------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGH-LSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~~---------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~ 68 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ .++||++||..+. ..+.
T Consensus 97 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------- 162 (278)
T 2bgk_A 97 FGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG-------------- 162 (278)
T ss_dssp EECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT--------------
T ss_pred EECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC--------------
Confidence 588886521 2789999999999999999999999965 5899999998873 3220
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
....|+.||++++.+++.++.|+.+. ||++++|+||+|.|++....
T Consensus 163 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~~ 208 (278)
T 2bgk_A 163 ----------------------------VSHVYTATKHAVLGLTTSLCTELGEY----GIRVNCVSPYIVASPLLTDV 208 (278)
T ss_dssp ----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESCCSCCCCTTS
T ss_pred ----------------------------CCcchHHHHHHHHHHHHHHHHHHhhc----CcEEEEEEeceecchhhhhh
Confidence 13689999999999999999999988 99999999999999997654
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.62 E-value=7e-16 Score=117.06 Aligned_cols=98 Identities=21% Similarity=0.290 Sum_probs=83.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 84 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------- 147 (244)
T 1edo_A 84 VNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG---------------- 147 (244)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----------------
T ss_pred EECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCC----------------
Confidence 58898753 23789999999999999999999999954 589999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..+++.++.++... ||++++|+||+++|++...
T Consensus 148 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 191 (244)
T 1edo_A 148 ---------------------------QANYAAAKAGVIGFSKTAAREGASR----NINVNVVCPGFIASDMTAK 191 (244)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECSBCSHHHHT
T ss_pred ---------------------------CccchhhHHHHHHHHHHHHHHhhhc----CCEEEEEeeCccccchhhh
Confidence 4789999999999999999999887 8999999999999998654
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-15 Score=119.40 Aligned_cols=98 Identities=23% Similarity=0.294 Sum_probs=80.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 126 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------------- 189 (285)
T 2c07_A 126 VNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG---------------- 189 (285)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----------------
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC----------------
Confidence 58898753 33789999999999999999999999964 489999999876 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..++++++.++.+. ||++++|+||+++|++...
T Consensus 190 ---------------------------~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 233 (285)
T 2c07_A 190 ---------------------------QANYSSSKAGVIGFTKSLAKELASR----NITVNAIAPGFISSDMTDK 233 (285)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCC-----
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHHHHh----CcEEEEEEeCcEecCchhh
Confidence 4789999999999999999999988 9999999999999998764
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.62 E-value=9.1e-16 Score=116.88 Aligned_cols=98 Identities=23% Similarity=0.263 Sum_probs=83.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCC---ccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRH---ARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~---g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++. ++||++||..+ ...+.
T Consensus 87 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------- 151 (251)
T 1zk4_A 87 VNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS--------------- 151 (251)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT---------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCC---------------
Confidence 58888652 237899999999999999999999999652 79999999877 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc--cccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD--CELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~--~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+++..++++++.|+. .. ||++++|+||+++|++...
T Consensus 152 ----------------------------~~~Y~~sK~a~~~~~~~~a~e~~~~~~----~i~v~~v~Pg~v~t~~~~~ 197 (251)
T 1zk4_A 152 ----------------------------LGAYNASKGAVRIMSKSAALDCALKDY----DVRVNTVHPGYIKTPLVDD 197 (251)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHHHTTC----SEEEEEEEECCBCCHHHHT
T ss_pred ----------------------------CccchHHHHHHHHHHHHHHHHhcccCC----CeEEEEEeeCcCcchhhhh
Confidence 47899999999999999999987 66 8999999999999997654
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.61 E-value=5.6e-16 Score=117.80 Aligned_cols=98 Identities=23% Similarity=0.292 Sum_probs=75.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ .+.+.
T Consensus 88 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------- 151 (247)
T 2hq1_A 88 VNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAG---------------- 151 (247)
T ss_dssp EECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------------
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC----------------
Confidence 58888753 23679999999999999999999999964 489999999876 43221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.++++++.++... ||++++|+||+++|++...
T Consensus 152 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 195 (247)
T 2hq1_A 152 ---------------------------QANYAASKAGLIGFTKSIAKEFAAK----GIYCNAVAPGIIKTDMTDV 195 (247)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHT
T ss_pred ---------------------------CcHhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEEEEEEeccchhh
Confidence 3689999999999999999999988 9999999999999987543
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.3e-15 Score=115.16 Aligned_cols=99 Identities=23% Similarity=0.290 Sum_probs=83.7
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 95 i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------- 159 (260)
T 3awd_A 95 VACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRP--------------- 159 (260)
T ss_dssp EECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS---------------
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCC---------------
Confidence 58888653 23789999999999999999999999954 589999999877 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.+...|++||++++.+++.++.++.+. ||++++|+||+|+|++..
T Consensus 160 --------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~----gi~v~~v~pg~v~t~~~~ 204 (260)
T 3awd_A 160 --------------------------QQQAAYNASKAGVHQYIRSLAAEWAPH----GIRANAVAPTYIETTLTR 204 (260)
T ss_dssp --------------------------SCCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCTTTH
T ss_pred --------------------------CCccccHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeeeeccchhh
Confidence 112689999999999999999999988 999999999999999875
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.61 E-value=1e-15 Score=116.09 Aligned_cols=98 Identities=27% Similarity=0.337 Sum_probs=83.8
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 85 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------- 148 (245)
T 2ph3_A 85 VNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPG---------------- 148 (245)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSS----------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCC----------------
Confidence 58898753 23789999999999999999999999964 489999999876 43221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+.||+++..+++.++.++... ||++++|+||+++|++...
T Consensus 149 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 192 (245)
T 2ph3_A 149 ---------------------------QANYVASKAGLIGFTRAVAKEYAQR----GITVNAVAPGFIETEMTER 192 (245)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHT
T ss_pred ---------------------------CcchHHHHHHHHHHHHHHHHHHHHc----CeEEEEEEEEeecCcchhh
Confidence 3689999999999999999999988 9999999999999987643
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=8.8e-16 Score=126.07 Aligned_cols=93 Identities=9% Similarity=-0.071 Sum_probs=75.9
Q ss_pred HHHHHHHHhhhhhHHH-HHHHHHhh-hhc-CCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhh
Q psy16223 10 AIQAEKTILTNYLGLV-RTCVFLFP-LLR-RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITK 85 (153)
Q Consensus 10 ~~~~~~~~~vN~~g~~-~l~~~~lp-~l~-~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (153)
.++|++++++|..+.| ++++.+++ .|. ++|+||++||..+ ...+.
T Consensus 192 ~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~------------------------------- 240 (405)
T 3zu3_A 192 QSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDI------------------------------- 240 (405)
T ss_dssp HHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTT-------------------------------
T ss_pred HHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCC-------------------------------
Confidence 3789999999999998 77877764 454 4689999999988 44332
Q ss_pred cCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 86 EHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 86 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
+....|++||+++..++|+|+.||.+.. ||+||+|+||+|+|+|+...
T Consensus 241 ----------~~~~aY~AaKaal~~ltrsLA~Ela~~~---GIRVNaVaPG~i~T~~s~~i 288 (405)
T 3zu3_A 241 ----------YWNGSIGAAKKDLDQKVLAIRESLAAHG---GGDARVSVLKAVVSQASSAI 288 (405)
T ss_dssp ----------TTTSHHHHHHHHHHHHHHHHHHHHHTTT---SCEEEEEECCCCCCHHHHTS
T ss_pred ----------ccchHHHHHHHHHHHHHHHHHHHhCccc---CeEEEEEEeCCCcCchhhcC
Confidence 1127899999999999999999997531 69999999999999987654
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-15 Score=116.04 Aligned_cols=99 Identities=26% Similarity=0.280 Sum_probs=83.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------------- 153 (254)
T 2wsb_A 90 VNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRP---------------- 153 (254)
T ss_dssp EECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS----------------
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCC----------------
Confidence 58898753 23789999999999999999999999964 589999999877 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.+...|++||++++.++++++.++.+. ||++++|+||++.|++..
T Consensus 154 -------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~----gi~v~~v~Pg~v~t~~~~ 198 (254)
T 2wsb_A 154 -------------------------QFASSYMASKGAVHQLTRALAAEWAGR----GVRVNALAPGYVATEMTL 198 (254)
T ss_dssp -------------------------SCBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCSHHHH
T ss_pred -------------------------CcchHHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEEecccCchhhh
Confidence 112689999999999999999999988 999999999999998753
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.3e-15 Score=118.10 Aligned_cols=97 Identities=24% Similarity=0.284 Sum_probs=81.5
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 113 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------------- 176 (272)
T 1yb1_A 113 VNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF---------------- 176 (272)
T ss_dssp EECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH----------------
T ss_pred EECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC----------------
Confidence 588987532 3679999999999999999999999954 489999999887 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc---cccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD---CELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||++++.+++.++.|+. .. ||++++|+||+|+|+|.+
T Consensus 177 ---------------------------~~~Y~~sK~a~~~l~~~la~e~~~~~~~----gi~v~~v~Pg~v~t~~~~ 222 (272)
T 1yb1_A 177 ---------------------------LLAYCSSKFAAVGFHKTLTDELAALQIT----GVKTTCLCPNFVNTGFIK 222 (272)
T ss_dssp ---------------------------HHHHHHHHHHHHHHHHHHHHHHHHTTCT----TEEEEEEEETHHHHCSTT
T ss_pred ---------------------------chhHHHHHHHHHHHHHHHHHHHHHhCCC----CeEEEEEeCCcccCCccc
Confidence 36899999999999999999996 44 899999999999999864
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.59 E-value=1.3e-15 Score=118.78 Aligned_cols=96 Identities=21% Similarity=0.286 Sum_probs=80.9
Q ss_pred CCC-CCCCc------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNR-ASTVP------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 inn-ag~~~------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
||| ||... ..++|++++++|+.|++.+++.++|.|++ +++||++||..+ ...+.
T Consensus 111 i~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------- 173 (286)
T 1xu9_A 111 ILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM----------------- 173 (286)
T ss_dssp EECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT-----------------
T ss_pred EECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCC-----------------
Confidence 577 56542 24789999999999999999999999864 689999999887 33222
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHh--ccccCCCCeEEEEeeCCcccCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKF--DCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~--~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|++||++++.++++++.|+ ... ||++++|+||+|+|++.
T Consensus 174 --------------------------~~~Y~asK~a~~~~~~~l~~e~~~~~~----~i~v~~v~Pg~v~t~~~ 217 (286)
T 1xu9_A 174 --------------------------VAAYSASKFALDGFFSSIRKEYSVSRV----NVSITLCVLGLIDTETA 217 (286)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHHHHTC----CCEEEEEEECCBCCHHH
T ss_pred --------------------------ccHHHHHHHHHHHHHHHHHHHHhhcCC----CeEEEEeecCccCChhH
Confidence 4789999999999999999999 455 79999999999999975
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=2.3e-15 Score=115.37 Aligned_cols=105 Identities=20% Similarity=0.232 Sum_probs=84.4
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|.+ .++||++||..+ ...+..
T Consensus 97 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------------- 162 (265)
T 1h5q_A 97 IANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-------------- 162 (265)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE--------------
T ss_pred EECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc--------------
Confidence 58898752 33789999999999999999999999853 389999999876 332110
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
... ..+...|+.||++++.+++.++.++.+. ||++++|+||+|+|++...
T Consensus 163 --------------------~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 212 (265)
T 1h5q_A 163 --------------------LNG--SLTQVFYNSSKAACSNLVKGLAAEWASA----GIRVNALSPGYVNTDQTAH 212 (265)
T ss_dssp --------------------TTE--ECSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCGGGGG
T ss_pred --------------------ccc--cccccccHHHHHHHHHHHHHHHHHHHhc----CcEEEEEecCccccccccc
Confidence 000 0113689999999999999999999988 9999999999999998764
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=2e-15 Score=114.65 Aligned_cols=98 Identities=23% Similarity=0.333 Sum_probs=83.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------- 153 (248)
T 2pnf_A 90 VNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVG---------------- 153 (248)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTT----------------
T ss_pred EECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCC----------------
Confidence 58888753 23789999999999999999999999964 489999999766 33221
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+++..+++.++.++... ||++++|+||+++|++...
T Consensus 154 ---------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----~i~v~~v~Pg~v~t~~~~~ 197 (248)
T 2pnf_A 154 ---------------------------QVNYSTTKAGLIGFTKSLAKELAPR----NVLVNAVAPGFIETDMTAV 197 (248)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCGGGGG
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHhccc----CeEEEEEEeceecCchhhh
Confidence 3689999999999999999999888 8999999999999998653
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=2.1e-15 Score=113.95 Aligned_cols=98 Identities=22% Similarity=0.138 Sum_probs=82.4
Q ss_pred CCCCCCCcc-----------HHHHHHHHhhhhhHHHHHHHHHhhhhcCC--------ccEEEecCCcc-cccccccHHHH
Q psy16223 1 MNRASTVPF-----------AIQAEKTILTNYLGLVRTCVFLFPLLRRH--------ARVVNLSSSAG-HLSQITNLELK 60 (153)
Q Consensus 1 innag~~~~-----------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~--------g~iv~~sS~~~-~~~~~~~~~~~ 60 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++. ++||++||..+ ...+.
T Consensus 71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------ 144 (242)
T 1uay_A 71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG------ 144 (242)
T ss_dssp EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT------
T ss_pred EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC------
Confidence 578886432 13899999999999999999999999753 29999999877 33221
Q ss_pred hhhhccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccC
Q psy16223 61 KRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVAT 140 (153)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T 140 (153)
...|++||+++..+++.++.++.+. ||++++|+||+|+|
T Consensus 145 -------------------------------------~~~Y~~sK~a~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t 183 (242)
T 1uay_A 145 -------------------------------------QAAYAASKGGVVALTLPAARELAGW----GIRVVTVAPGLFDT 183 (242)
T ss_dssp -------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSCSS
T ss_pred -------------------------------------CchhhHHHHHHHHHHHHHHHHHhhc----CcEEEEEEeccCcc
Confidence 4789999999999999999999988 99999999999999
Q ss_pred CCCCC
Q psy16223 141 NMSSF 145 (153)
Q Consensus 141 ~~~~~ 145 (153)
++...
T Consensus 184 ~~~~~ 188 (242)
T 1uay_A 184 PLLQG 188 (242)
T ss_dssp HHHHT
T ss_pred hhhhc
Confidence 88653
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=3.1e-15 Score=116.21 Aligned_cols=98 Identities=18% Similarity=0.244 Sum_probs=81.6
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-C---ccEEEecCCcccc-cccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-H---ARVVNLSSSAGHL-SQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~---g~iv~~sS~~~~~-~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ + ++||++||..+.. .+.
T Consensus 116 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 181 (279)
T 1xg5_A 116 INNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL-------------- 181 (279)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC--------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC--------------
Confidence 58888652 34789999999999999999999999964 2 7999999987742 111
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc--cccCCCCeEEEEeeCCcccCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD--CELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~--~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
.....|+++|+++..+++.++.++. .. ||++++|+||+|+|++.
T Consensus 182 ---------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~----~i~v~~v~Pg~v~t~~~ 227 (279)
T 1xg5_A 182 ---------------------------SVTHFYSATKYAVTALTEGLRQELREAQT----HIRATCISPGVVETQFA 227 (279)
T ss_dssp ---------------------------GGGHHHHHHHHHHHHHHHHHHHHHHHTTC----CCEEEEEEESCBCSSHH
T ss_pred ---------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCC----CeEEEEEecCcccchhh
Confidence 0136899999999999999999997 66 89999999999999984
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.58 E-value=3e-15 Score=116.01 Aligned_cols=98 Identities=15% Similarity=0.198 Sum_probs=81.4
Q ss_pred CCCCCCCcc---------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVPF---------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~~---------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||.... .++|++++++|+.|++.+++.++|.|++ .++||++||..+ .....
T Consensus 116 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------- 181 (279)
T 3ctm_A 116 VANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIP-------------- 181 (279)
T ss_dssp EECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-----------------
T ss_pred EECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCC--------------
Confidence 578875422 3679999999999999999999999964 589999999887 32000
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.....|++||++++.++++++.++... | ++++|+||+++|+|..
T Consensus 182 ---------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~----~-~v~~v~Pg~v~t~~~~ 225 (279)
T 3ctm_A 182 ---------------------------QLQAPYNTAKAACTHLAKSLAIEWAPF----A-RVNTISPGYIDTDITD 225 (279)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTT----C-EEEEEEECSBSSTTTS
T ss_pred ---------------------------CCcccHHHHHHHHHHHHHHHHHHhccc----C-CEEEEeccCCcccccc
Confidence 013689999999999999999999887 8 9999999999999975
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2.7e-15 Score=114.42 Aligned_cols=98 Identities=21% Similarity=0.189 Sum_probs=82.9
Q ss_pred CCCCCC-Cc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-C------ccEEEecCCcc-c-ccccccHHHHhhh
Q psy16223 1 MNRAST-VP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-H------ARVVNLSSSAG-H-LSQITNLELKKRL 63 (153)
Q Consensus 1 innag~-~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~------g~iv~~sS~~~-~-~~~~~~~~~~~~~ 63 (153)
|||||. .. ..++|++++++|+.|++.+++.++|.|.+ + ++||++||..+ . ..+.
T Consensus 90 i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------- 160 (258)
T 3afn_B 90 INNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPG--------- 160 (258)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTT---------
T ss_pred EECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCC---------
Confidence 588986 31 23679999999999999999999999853 2 79999999876 3 2221
Q ss_pred hccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 64 MEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|+.||++++.+++.++.++.+. ||++++|+||+++|++.
T Consensus 161 ----------------------------------~~~Y~~sK~a~~~~~~~~~~e~~~~----gi~v~~v~Pg~v~t~~~ 202 (258)
T 3afn_B 161 ----------------------------------AGLYGAAKAFLHNVHKNWVDFHTKD----GVRFNIVSPGTVDTAFH 202 (258)
T ss_dssp ----------------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBSSGGG
T ss_pred ----------------------------------chHHHHHHHHHHHHHHHHHHhhccc----CeEEEEEeCCCcccccc
Confidence 3689999999999999999999988 99999999999999987
Q ss_pred CC
Q psy16223 144 SF 145 (153)
Q Consensus 144 ~~ 145 (153)
..
T Consensus 203 ~~ 204 (258)
T 3afn_B 203 AD 204 (258)
T ss_dssp TT
T ss_pred cc
Confidence 64
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=2.7e-15 Score=113.75 Aligned_cols=97 Identities=20% Similarity=0.218 Sum_probs=82.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCccc-ccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAGH-LSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|.+ .++||++||..+. ..+.
T Consensus 81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------- 145 (244)
T 1cyd_A 81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN--------------- 145 (244)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT---------------
T ss_pred EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC---------------
Confidence 58888653 23789999999999999999999999853 5899999998773 3221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+.||++++.+++.++.++... ||++++|+||++.|++..
T Consensus 146 ----------------------------~~~Y~~sK~a~~~~~~~~a~~~~~~----gi~v~~v~pg~v~t~~~~ 188 (244)
T 1cyd_A 146 ----------------------------LITYSSTKGAMTMLTKAMAMELGPH----KIRVNSVNPTVVLTDMGK 188 (244)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBTTHHHH
T ss_pred ----------------------------cchhHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCcccCcccc
Confidence 3689999999999999999999988 999999999999998753
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3.6e-15 Score=113.63 Aligned_cols=98 Identities=16% Similarity=0.188 Sum_probs=83.2
Q ss_pred CCCCCCCc------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|++ .++||++||..+ ...+.
T Consensus 93 i~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------------- 155 (255)
T 1fmc_A 93 VNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN----------------- 155 (255)
T ss_dssp EECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT-----------------
T ss_pred EECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC-----------------
Confidence 58888753 24789999999999999999999999964 589999999876 32211
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||++++.+++.++.++... ||++++|+||++.|++...
T Consensus 156 --------------------------~~~Y~~sK~a~~~~~~~~~~~~~~~----~i~v~~v~Pg~v~t~~~~~ 199 (255)
T 1fmc_A 156 --------------------------MTSYASSKAAASHLVRNMAFDLGEK----NIRVNGIAPGAILTDALKS 199 (255)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECSBCSHHHHT
T ss_pred --------------------------CcccHHHHHHHHHHHHHHHHHhhhc----CcEEEEEecccCcchhhhh
Confidence 4689999999999999999999887 8999999999999987543
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=8.3e-15 Score=114.58 Aligned_cols=97 Identities=15% Similarity=0.064 Sum_probs=80.0
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhc-C--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLR-R--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~-~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||... ..++|++++++|+.|++.+++.++|.|. + .++||++||..+ ...+.
T Consensus 109 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------- 173 (302)
T 1w6u_A 109 INNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF--------------- 173 (302)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT---------------
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCC---------------
Confidence 58898642 2378999999999999999999999995 2 489999999876 33221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC-CCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN-MSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~-~~~ 144 (153)
...|++||++++.+++.++.++... ||++++|+||+++|+ +..
T Consensus 174 ----------------------------~~~Y~~sK~a~~~~~~~la~~~~~~----gi~v~~v~Pg~v~t~~~~~ 217 (302)
T 1w6u_A 174 ----------------------------VVPSASAKAGVEAMSKSLAAEWGKY----GMRFNVIQPGPIKTKGAFS 217 (302)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCC-----
T ss_pred ----------------------------cchhHHHHHHHHHHHHHHHHHhhhc----CcEEEEEeeccCCCcchhh
Confidence 3689999999999999999999988 999999999999998 543
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=4e-15 Score=114.50 Aligned_cols=97 Identities=23% Similarity=0.183 Sum_probs=83.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCccc-c-cccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGH-L-SQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~-~-~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.|+++++||++||..+. . .+
T Consensus 104 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------------ 165 (274)
T 1ja9_A 104 MSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP------------------ 165 (274)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC------------------
T ss_pred EECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCC------------------
Confidence 58898753 237899999999999999999999999866899999998764 2 11
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....|++||++++.+++.++.++... ||++++|+||+++|++..
T Consensus 166 -------------------------~~~~Y~~sK~a~~~~~~~~~~e~~~~----gi~v~~v~Pg~v~t~~~~ 209 (274)
T 1ja9_A 166 -------------------------NHALYAGSKAAVEGFCRAFAVDCGAK----GVTVNCIAPGGVKTDMFD 209 (274)
T ss_dssp -------------------------SCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBSSHHHH
T ss_pred -------------------------CCchHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcccccchh
Confidence 13689999999999999999999988 999999999999998754
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.2e-15 Score=123.60 Aligned_cols=93 Identities=12% Similarity=0.031 Sum_probs=77.1
Q ss_pred cHHHHHHHHhhhhhHHH-HHHHHHhhh-h-cCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHh
Q psy16223 9 FAIQAEKTILTNYLGLV-RTCVFLFPL-L-RRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDIT 84 (153)
Q Consensus 9 ~~~~~~~~~~vN~~g~~-~l~~~~lp~-l-~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (153)
..++|+.++++|..+.+ .+++.+++. | .++|+||++||..+ ...+.
T Consensus 205 t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~------------------------------ 254 (418)
T 4eue_A 205 SIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKI------------------------------ 254 (418)
T ss_dssp CHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTT------------------------------
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCc------------------------------
Confidence 34789999999999988 777776653 3 34689999999887 44332
Q ss_pred hcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhcc-ccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 85 KEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC-ELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 85 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~-~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
+....|++||+++..++|+|+.|+.+ . ||+||+|+||+|+|+++...
T Consensus 255 -----------~~~~aY~ASKaAL~~ltrsLA~ELa~~~----GIrVN~V~PG~v~T~~s~~i 302 (418)
T 4eue_A 255 -----------YREGTIGIAKKDLEDKAKLINEKLNRVI----GGRAFVSVNKALVTKASAYI 302 (418)
T ss_dssp -----------TTTSHHHHHHHHHHHHHHHHHHHHHHHH----SCEEEEEECCCCCCHHHHTS
T ss_pred -----------cccHHHHHHHHHHHHHHHHHHHHhCCcc----CeEEEEEECCcCcChhhhcC
Confidence 11378999999999999999999999 8 99999999999999987655
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.2e-15 Score=110.50 Aligned_cols=95 Identities=11% Similarity=0.060 Sum_probs=81.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..++|++++++|+.|++.+++.+.|.|+++++||++||..+ ...+.
T Consensus 63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------------ 124 (202)
T 3d7l_A 63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQ------------------ 124 (202)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTT------------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCc------------------
Confidence 57888642 23789999999999999999999999987799999999876 33221
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|+.+|++++.+++.++.++ +. ||++++|+||++.|++.
T Consensus 125 -------------------------~~~Y~~sK~~~~~~~~~~~~e~-~~----gi~v~~v~pg~v~~~~~ 165 (202)
T 3d7l_A 125 -------------------------GASAAMANGAVTAFAKSAAIEM-PR----GIRINTVSPNVLEESWD 165 (202)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHTTSC-ST----TCEEEEEEECCBGGGHH
T ss_pred -------------------------cHHHHHHHHHHHHHHHHHHHHc-cC----CeEEEEEecCccCCchh
Confidence 3689999999999999999998 66 89999999999999864
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=2.3e-14 Score=112.26 Aligned_cols=95 Identities=18% Similarity=0.239 Sum_probs=79.7
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhh-cC-CccEEEecCCcccccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLL-RR-HARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l-~~-~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|++.+++.++|.+ ++ +++||++||......+.
T Consensus 105 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------------- 167 (303)
T 1yxm_A 105 VNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPL----------------- 167 (303)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTT-----------------
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCCCc-----------------
Confidence 58998642 237899999999999999999999955 33 68999999977222111
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|+++|+++..+++.++.++... ||++++|+||+|.|++
T Consensus 168 --------------------------~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~ 208 (303)
T 1yxm_A 168 --------------------------AVHSGAARAGVYNLTKSLALEWACS----GIRINCVAPGVIYSQT 208 (303)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEECSBCCTG
T ss_pred --------------------------chhhHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCCcccch
Confidence 3689999999999999999999988 9999999999999994
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.3e-14 Score=108.71 Aligned_cols=124 Identities=22% Similarity=0.184 Sum_probs=85.8
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCC--ccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRH--ARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~--g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
|||||.....+.|+.++++|+.|++.+++.+++.|++. ++||++||..+...........+.+.. ..+.......+
T Consensus 67 i~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 144 (255)
T 2dkn_A 67 VCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLA--GDEARAIELAE 144 (255)
T ss_dssp EECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHH--TCHHHHHHHHH
T ss_pred EECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcc--cchhhhhhhcc
Confidence 58899876456699999999999999999999999764 899999998773221111111111100 01111111100
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.. . .+...|+.||++++.+++.++.++... ||++++|+||+|.|++..
T Consensus 145 ~~---~-----------~~~~~Y~~sK~a~~~~~~~~~~~~~~~----gi~v~~v~pg~v~~~~~~ 192 (255)
T 2dkn_A 145 QQ---G-----------QTHLAYAGSKYAVTCLARRNVVDWAGR----GVRLNVVAPGAVETPLLQ 192 (255)
T ss_dssp HH---C-----------CHHHHHHHHHHHHHHHHHHTHHHHHHT----TCEEEEEEECCBCSHHHH
T ss_pred cc---C-----------CcchhHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEcCCcccchhhh
Confidence 00 0 013689999999999999999999877 899999999999998753
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.45 E-value=8.7e-14 Score=102.83 Aligned_cols=95 Identities=16% Similarity=0.031 Sum_probs=77.5
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||... ..++|++++++|+.|++.+++.+. -...++||++||..+ ...+.
T Consensus 71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--~~~~~~iv~~sS~~~~~~~~~------------------ 130 (207)
T 2yut_A 71 VHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHAR--FQKGARAVFFGAYPRYVQVPG------------------ 130 (207)
T ss_dssp EECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCC--EEEEEEEEEECCCHHHHSSTT------------------
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH--hcCCcEEEEEcChhhccCCCC------------------
Confidence 58888753 236799999999999999999982 123489999999876 33211
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+.+|++++.+++.++.++.+. ||++++|+||++.|++..
T Consensus 131 -------------------------~~~Y~~sK~a~~~~~~~~~~~~~~~----gi~v~~v~pg~v~t~~~~ 173 (207)
T 2yut_A 131 -------------------------FAAYAAAKGALEAYLEAARKELLRE----GVHLVLVRLPAVATGLWA 173 (207)
T ss_dssp -------------------------BHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEECCCCBCSGGGG
T ss_pred -------------------------cchHHHHHHHHHHHHHHHHHHHhhh----CCEEEEEecCcccCCCcc
Confidence 4789999999999999999999887 899999999999999743
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.7e-12 Score=121.83 Aligned_cols=96 Identities=18% Similarity=0.196 Sum_probs=76.9
Q ss_pred CCCCCCCcc----------HHHHHHHHhhhhhHHHHHHHHH--hhhhcCC--ccEEEecCCcccccccccHHHHhhhhcc
Q psy16223 1 MNRASTVPF----------AIQAEKTILTNYLGLVRTCVFL--FPLLRRH--ARVVNLSSSAGHLSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~~----------~~~~~~~~~vN~~g~~~l~~~~--lp~l~~~--g~iv~~sS~~~~~~~~~~~~~~~~~~~~ 66 (153)
|||||+... .++|++++++|+.|++.+++.+ +|.|.+. ++||++||..+... .
T Consensus 769 VNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g-g------------ 835 (1887)
T 2uv8_A 769 IPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-G------------ 835 (1887)
T ss_dssp EECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS-C------------
T ss_pred EECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC-C------------
Confidence 689997521 4679999999999999999998 8888653 79999999887421 1
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHH-HHHHHHHhccccCCCCeEEEEeeCCccc-CCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLL-TRIYQKKFDCELGNQDKVINAVHPGYVA-TNMSS 144 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~-~~~l~~e~~~~~~~~gi~v~~v~PG~v~-T~~~~ 144 (153)
...|++||+++.+| ++.++.++.+ .|+||+|+||+|+ |+|..
T Consensus 836 -------------------------------~~aYaASKAAL~~Lttr~lA~ela~-----~IrVNaV~PG~V~tT~m~~ 879 (1887)
T 2uv8_A 836 -------------------------------DGMYSESKLSLETLFNRWHSESWAN-----QLTVCGAIIGWTRGTGLMS 879 (1887)
T ss_dssp -------------------------------BTTHHHHHHHGGGHHHHHHHSSCTT-----TEEEEEEEECCEECC----
T ss_pred -------------------------------CchHHHHHHHHHHHHHHHHHHHhCC-----CeEEEEEEecccccccccc
Confidence 36899999999998 8999998865 3999999999999 88865
Q ss_pred C
Q psy16223 145 F 145 (153)
Q Consensus 145 ~ 145 (153)
.
T Consensus 880 ~ 880 (1887)
T 2uv8_A 880 A 880 (1887)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.8e-12 Score=108.55 Aligned_cols=93 Identities=14% Similarity=0.038 Sum_probs=76.7
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||+... .++|++++++|+.|++.+++.+.+.|++ .++||++||..+ .+.++
T Consensus 347 Vh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~g--------------- 411 (525)
T 3qp9_A 347 LHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAG--------------- 411 (525)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCTT---------------
T ss_pred EECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCCC---------------
Confidence 689998532 3789999999999999999999999965 479999999988 54332
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+++..| +.++... ||++++|+||+++|+|..
T Consensus 412 ----------------------------~~~YaaaKa~l~~l----A~~~~~~----gi~v~sI~pG~~~tgm~~ 450 (525)
T 3qp9_A 412 ----------------------------QGAYAAGTAFLDAL----AGQHRAD----GPTVTSVAWSPWEGSRVT 450 (525)
T ss_dssp ----------------------------CHHHHHHHHHHHHH----HTSCCSS----CCEEEEEEECCBTTSGGG
T ss_pred ----------------------------CHHHHHHHHHHHHH----HHHHHhC----CCCEEEEECCcccccccc
Confidence 47899999999877 4566666 899999999999999973
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=6.6e-12 Score=117.86 Aligned_cols=95 Identities=20% Similarity=0.188 Sum_probs=77.3
Q ss_pred CCCCCCCcc----------HHHHHHHHhhhhhHHHHHHHH--HhhhhcCC--ccEEEecCCcccccccccHHHHhhhhcc
Q psy16223 1 MNRASTVPF----------AIQAEKTILTNYLGLVRTCVF--LFPLLRRH--ARVVNLSSSAGHLSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~~----------~~~~~~~~~vN~~g~~~l~~~--~lp~l~~~--g~iv~~sS~~~~~~~~~~~~~~~~~~~~ 66 (153)
|||||+... .++|++++++|+.|++.+++. ++|.|.+. ++||++||..+... .
T Consensus 744 VnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g-g------------ 810 (1878)
T 2uv9_A 744 VPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG-N------------ 810 (1878)
T ss_dssp EECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS-C------------
T ss_pred EeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC-C------------
Confidence 689997532 378999999999999999987 77888653 79999999887321 1
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHH-hccccCCCCeEEEEeeCCccc-CCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKK-FDCELGNQDKVINAVHPGYVA-TNMSS 144 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e-~~~~~~~~gi~v~~v~PG~v~-T~~~~ 144 (153)
...|++||+++.+|++.+..+ +.+ +|+||+|+||+|+ |+|..
T Consensus 811 -------------------------------~~aYaASKAAL~aLt~~laAeEla~-----~IrVNaVaPG~V~gT~m~~ 854 (1878)
T 2uv9_A 811 -------------------------------DGLYSESKLALETLFNRWYSESWGN-----YLTICGAVIGWTRGTGLMS 854 (1878)
T ss_dssp -------------------------------CSSHHHHHHHHTTHHHHHHHSTTTT-----TEEEEEEEECCBCCTTSCS
T ss_pred -------------------------------chHHHHHHHHHHHHHHHHHHHHcCC-----CeEEEEEEecceecCcccc
Confidence 368999999999999877655 544 4999999999999 99864
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.1e-12 Score=118.95 Aligned_cols=95 Identities=18% Similarity=0.206 Sum_probs=78.7
Q ss_pred CCCCCCCcc----------HHHHHHHHhhhhhHHHHHHHHH--hhhhcCC--ccEEEecCCcccccccccHHHHhhhhcc
Q psy16223 1 MNRASTVPF----------AIQAEKTILTNYLGLVRTCVFL--FPLLRRH--ARVVNLSSSAGHLSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~~----------~~~~~~~~~vN~~g~~~l~~~~--lp~l~~~--g~iv~~sS~~~~~~~~~~~~~~~~~~~~ 66 (153)
|||||+... .++|++++++|+.|++.+++.+ +|.|++. ++||++||..+... .
T Consensus 570 VNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G-g------------ 636 (1688)
T 2pff_A 570 IPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-G------------ 636 (1688)
T ss_dssp ECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS-C------------
T ss_pred EECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC-C------------
Confidence 689997421 4789999999999999999998 8888653 79999999887321 1
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHH-HHHHHHHhccccCCCCeEEEEeeCCccc-CCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLL-TRIYQKKFDCELGNQDKVINAVHPGYVA-TNMSS 144 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~-~~~l~~e~~~~~~~~gi~v~~v~PG~v~-T~~~~ 144 (153)
...|++||+++.+| ++.++.++.+ +|+||+|+||+|+ |+|..
T Consensus 637 -------------------------------~saYaASKAAL~aLttrsLAeEla~-----~IRVNaVaPG~V~TT~M~~ 680 (1688)
T 2pff_A 637 -------------------------------DGMYSESKLSLETLFNRWHSESWAN-----QLTVCGAIIGWTRGTGLMS 680 (1688)
T ss_dssp -------------------------------BTTHHHHHHHHTHHHHHTTTSSCTT-----TEECCCCCCCCCCCCSSSC
T ss_pred -------------------------------chHHHHHHHHHHHHHHHHHHHHcCC-----CeEEEEEEECcCcCCcccC
Confidence 36899999999998 7788887765 4999999999999 78865
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.6e-12 Score=111.90 Aligned_cols=88 Identities=14% Similarity=0.056 Sum_probs=74.8
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||+... .++|++++++|+.|++++++.+.|.| +||++||..+ .+.++
T Consensus 616 VnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l----~iV~~SS~ag~~g~~g------------------ 673 (795)
T 3slk_A 616 VHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV----ALVLFSSVSGVLGSGG------------------ 673 (795)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS----EEEEEEETHHHHTCSS------------------
T ss_pred EECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC----EEEEEccHHhcCCCCC------------------
Confidence 689998632 37899999999999999999999988 8999999998 55443
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|+++|+ |+++|++++... ||++++|+||++.|.+.
T Consensus 674 -------------------------~~~YaAaka----~~~alA~~~~~~----Gi~v~sI~pG~v~t~g~ 711 (795)
T 3slk_A 674 -------------------------QGNYAAANS----FLDALAQQRQSR----GLPTRSLAWGPWAEHGM 711 (795)
T ss_dssp -------------------------CHHHHHHHH----HHHHHHHHHHHT----TCCEEEEEECCCSCCCH
T ss_pred -------------------------CHHHHHHHH----HHHHHHHHHHHc----CCeEEEEECCeECcchh
Confidence 478999995 777788888877 99999999999998753
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.9e-10 Score=96.82 Aligned_cols=90 Identities=14% Similarity=-0.029 Sum_probs=72.1
Q ss_pred CCCCCCC-cc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTV-PF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~-~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||+. .. .++|++++++|+.|++.+.+.+.+.. .++||++||..+ .+.++
T Consensus 324 Vh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~--~~~iV~~SS~a~~~g~~g----------------- 384 (496)
T 3mje_A 324 FHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD--LDAFVLFSSGAAVWGSGG----------------- 384 (496)
T ss_dssp EECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC--CSEEEEEEEHHHHTTCTT-----------------
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC--CCEEEEEeChHhcCCCCC-----------------
Confidence 6899986 22 37899999999999999999887763 478999999887 54332
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|+++|+++..|++.++ .. ||++++|+||++.|..+
T Consensus 385 --------------------------~~~YaAaKa~ldala~~~~----~~----Gi~v~sV~pG~w~~~gm 422 (496)
T 3mje_A 385 --------------------------QPGYAAANAYLDALAEHRR----SL----GLTASSVAWGTWGEVGM 422 (496)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHH----HT----TCCCEEEEECEESSSCC
T ss_pred --------------------------cHHHHHHHHHHHHHHHHHH----hc----CCeEEEEECCcccCCcc
Confidence 4789999999988877543 45 89999999998866544
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.2e-09 Score=84.05 Aligned_cols=104 Identities=20% Similarity=0.156 Sum_probs=74.0
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
|||||.. ..+.|++++++|+.|++.+++.+... ..++||++||..+.+..... ..+.
T Consensus 69 i~~Ag~~-~~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~g~~~~~---------~~~~----------- 125 (267)
T 3rft_A 69 VHLGGIS-VEKPFEQILQGNIIGLYNLYEAARAH--GQPRIVFASSNHTIGYYPQT---------ERLG----------- 125 (267)
T ss_dssp EECCSCC-SCCCHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGTTSBTT---------SCBC-----------
T ss_pred EECCCCc-CcCCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcchHHhCCCCCC---------CCCC-----------
Confidence 5899985 45679999999999999999998442 34799999998764321100 0000
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.+.. ..+...|+.||.+++.+++.++.++ |++++.|.||.|.+++..
T Consensus 126 --------e~~~--~~~~~~Y~~sK~~~e~~~~~~a~~~-------g~~~~~vr~~~v~~~~~~ 172 (267)
T 3rft_A 126 --------PDVP--ARPDGLYGVSKCFGENLARMYFDKF-------GQETALVRIGSCTPEPNN 172 (267)
T ss_dssp --------TTSC--CCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECBCSSSCCS
T ss_pred --------CCCC--CCCCChHHHHHHHHHHHHHHHHHHh-------CCeEEEEEeecccCCCCC
Confidence 0011 1124789999999999999998875 688888888888776543
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-09 Score=106.67 Aligned_cols=84 Identities=18% Similarity=0.145 Sum_probs=62.8
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhhcCC--c----cEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhc
Q psy16223 13 AEKTILTNYLGLVRTCVFLFPLLRRH--A----RVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKE 86 (153)
Q Consensus 13 ~~~~~~vN~~g~~~l~~~~lp~l~~~--g----~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (153)
++..+++|+.+++.+++.+.|.|+.. + .|+..++..+.. +.
T Consensus 2256 ~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss~~g~~-g~-------------------------------- 2302 (3089)
T 3zen_D 2256 AEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSPNRGMF-GG-------------------------------- 2302 (3089)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECSSTTSC-SS--------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCcccccC-CC--------------------------------
Confidence 34449999999999999999999642 1 233333322211 11
Q ss_pred CCCccccCCCCCchhHHhHHHHHHHHHHHHHH--hccccCCCCeEEEEeeCCccc-CCCCCC
Q psy16223 87 HPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKK--FDCELGNQDKVINAVHPGYVA-TNMSSF 145 (153)
Q Consensus 87 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e--~~~~~~~~gi~v~~v~PG~v~-T~~~~~ 145 (153)
...|++||+|+++|+|+|+.| |.. +|+||+|+||+|+ |+|...
T Consensus 2303 -----------~~aYsASKaAl~~LtrslA~E~~~a~-----~IrVn~v~PG~v~tT~l~~~ 2348 (3089)
T 3zen_D 2303 -----------DGAYGEAKSALDALENRWSAEKSWAE-----RVSLAHALIGWTKGTGLMGQ 2348 (3089)
T ss_dssp -----------CSSHHHHGGGHHHHHHHHHHCSTTTT-----TEEEEEEECCCEECSTTTTT
T ss_pred -----------chHHHHHHHHHHHHHHHHHhccccCC-----CeEEEEEeecccCCCccccc
Confidence 358999999999999999999 653 6999999999999 777643
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.89 E-value=2.6e-09 Score=90.17 Aligned_cols=93 Identities=15% Similarity=0.053 Sum_probs=73.8
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||+... .+.++.++++|+.|++.+.+.+.+ +...++||++||..+ .+.++
T Consensus 340 Vh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~-~~~~~~~V~~SS~a~~~g~~g------------------ 400 (511)
T 2z5l_A 340 FHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTAD-IKGLDAFVLFSSVTGTWGNAG------------------ 400 (511)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSS-CTTCCCEEEEEEGGGTTCCTT------------------
T ss_pred EECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCEEEEEeCHHhcCCCCC------------------
Confidence 589997633 378999999999999999987654 334579999999887 44322
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc-cCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV-ATNMSSF 145 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v-~T~~~~~ 145 (153)
...|+++|+++..+++.++ .. |+++++|+||++ +|.|...
T Consensus 401 -------------------------~~~YaaaKa~ld~la~~~~----~~----gi~v~sv~pG~~~~tgm~~~ 441 (511)
T 2z5l_A 401 -------------------------QGAYAAANAALDALAERRR----AA----GLPATSVAWGLWGGGGMAAG 441 (511)
T ss_dssp -------------------------BHHHHHHHHHHHHHHHHHH----TT----TCCCEEEEECCBCSTTCCCC
T ss_pred -------------------------CHHHHHHHHHHHHHHHHHH----Hc----CCcEEEEECCcccCCccccc
Confidence 4789999999999888643 44 899999999998 8888754
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=7.5e-09 Score=86.76 Aligned_cols=90 Identities=20% Similarity=0.073 Sum_probs=68.7
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||.... .+.+++++++|+.|++.+.+.+.+. ..++||++||..+ .+.++
T Consensus 311 Ih~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~--~~~~~V~~SS~a~~~g~~g------------------ 370 (486)
T 2fr1_A 311 FHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFASAFGAPG------------------ 370 (486)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHHHTCCTT------------------
T ss_pred EECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC--CCCEEEEEcChHhcCCCCC------------------
Confidence 588987532 3789999999999999999987653 3479999999877 44332
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC-CC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN-MS 143 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~-~~ 143 (153)
...|+++|+++..|.+.+ ... |+++++|+||++.|+ |.
T Consensus 371 -------------------------~~~Yaaaka~l~~la~~~----~~~----gi~v~~i~pG~~~~~gm~ 409 (486)
T 2fr1_A 371 -------------------------LGGYAPGNAYLDGLAQQR----RSD----GLPATAVAWGTWAGSGMA 409 (486)
T ss_dssp -------------------------CTTTHHHHHHHHHHHHHH----HHT----TCCCEEEEECCBC-----
T ss_pred -------------------------CHHHHHHHHHHHHHHHHH----Hhc----CCeEEEEECCeeCCCccc
Confidence 478999999998876644 345 899999999999886 54
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=98.77 E-value=2.6e-08 Score=74.82 Aligned_cols=86 Identities=14% Similarity=-0.013 Sum_probs=67.4
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
|||||.....+.++..+++|+.+++.+++.+... ..++||++||..+...+
T Consensus 89 i~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~iv~~SS~~~~~~~--------------------------- 139 (242)
T 2bka_A 89 FCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG--GCKHFNLLSSKGADKSS--------------------------- 139 (242)
T ss_dssp EECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTTC---------------------------
T ss_pred EECCCcccccCCcccceeeeHHHHHHHHHHHHHC--CCCEEEEEccCcCCCCC---------------------------
Confidence 5889887666678899999999999988875432 23699999998764311
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCe-EEEEeeCCcccCCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDK-VINAVHPGYVATNMS 143 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi-~v~~v~PG~v~T~~~ 143 (153)
...|+.+|.+++.+++. . ++ +++.|+||++.|++.
T Consensus 140 -----------------~~~Y~~sK~~~e~~~~~-------~----~~~~~~~vrpg~v~~~~~ 175 (242)
T 2bka_A 140 -----------------NFLYLQVKGEVEAKVEE-------L----KFDRYSVFRPGVLLCDRQ 175 (242)
T ss_dssp -----------------SSHHHHHHHHHHHHHHT-------T----CCSEEEEEECCEEECTTG
T ss_pred -----------------cchHHHHHHHHHHHHHh-------c----CCCCeEEEcCceecCCCC
Confidence 36899999999988764 2 46 799999999999864
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.69 E-value=5.6e-08 Score=72.98 Aligned_cols=91 Identities=21% Similarity=0.137 Sum_probs=68.2
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
|||||.... ++++..+++|+.+++.+++.+... ..++||++||..+..... .
T Consensus 89 i~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~-~------------------------ 140 (236)
T 3e8x_A 89 VFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR--GIKRFIMVSSVGTVDPDQ-G------------------------ 140 (236)
T ss_dssp EECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH--TCCEEEEECCTTCSCGGG-S------------------------
T ss_pred EECCCCCCC-CCccccchhhHHHHHHHHHHHHHc--CCCEEEEEecCCCCCCCC-C------------------------
Confidence 578887643 568999999999999999987432 347999999965532110 0
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
. .....|+.+|.+++.+.+ .. |++++.|.||++.+++..
T Consensus 141 ---------~-----~~~~~Y~~sK~~~e~~~~-------~~----gi~~~~lrpg~v~~~~~~ 179 (236)
T 3e8x_A 141 ---------P-----MNMRHYLVAKRLADDELK-------RS----SLDYTIVRPGPLSNEEST 179 (236)
T ss_dssp ---------C-----GGGHHHHHHHHHHHHHHH-------HS----SSEEEEEEECSEECSCCC
T ss_pred ---------h-----hhhhhHHHHHHHHHHHHH-------HC----CCCEEEEeCCcccCCCCC
Confidence 0 013689999999998765 34 899999999999998754
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=1.2e-07 Score=75.15 Aligned_cols=116 Identities=14% Similarity=0.049 Sum_probs=77.2
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcC-------CccEEEecCCcccccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRR-------HARVVNLSSSAGHLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~-------~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~ 70 (153)
||+||.... .++++..+++|+.|++.+++.+.+.|.. +++||++||....+...........-....+.
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~- 156 (361)
T 1kew_A 78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFT- 156 (361)
T ss_dssp EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBC-
T ss_pred EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCC-
Confidence 578887643 2568899999999999999999998743 25999999975422110000000000000000
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.... ..+...|+.+|.+.+.+++.++.++ |++++.|.||.|.++...
T Consensus 157 ------------------E~~~--~~~~~~Y~~sK~~~e~~~~~~~~~~-------gi~~~~vrp~~v~G~~~~ 203 (361)
T 1kew_A 157 ------------------ETTA--YAPSSPYSASKASSDHLVRAWRRTY-------GLPTIVTNCSNNYGPYHF 203 (361)
T ss_dssp ------------------TTSC--CCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECEEESTTCC
T ss_pred ------------------CCCC--CCCCCccHHHHHHHHHHHHHHHHHh-------CCcEEEEeeceeECCCCC
Confidence 0000 1124789999999999999998875 699999999999998753
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.4e-07 Score=73.54 Aligned_cols=107 Identities=23% Similarity=0.193 Sum_probs=76.0
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... ++++..+++|+.|+..+++.+ +.+...++||++||....+..... ...+.|+
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~~~~~iv~~SS~~v~g~~~~~--------~~~~~E~------ 143 (321)
T 2pk3_A 79 FHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAV-RDSNLDCRILTIGSSEEYGMILPE--------ESPVSEE------ 143 (321)
T ss_dssp EECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHH-HHHTCCCEEEEEEEGGGTBSCCGG--------GCSBCTT------
T ss_pred EEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHH-HHhCCCCeEEEEccHHhcCCCCCC--------CCCCCCC------
Confidence 5788876432 368899999999999999998 666546899999998653211000 0000000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.. ..+...|+.+|.+.+.+++.++.+. |++++.|.||.+.++...
T Consensus 144 -------------~~--~~~~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilrp~~v~g~~~~ 188 (321)
T 2pk3_A 144 -------------NQ--LRPMSPYGVSKASVGMLARQYVKAY-------GMDIIHTRTFNHIGPGQS 188 (321)
T ss_dssp -------------SC--CBCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEECTTCC
T ss_pred -------------CC--CCCCCccHHHHHHHHHHHHHHHHHc-------CCCEEEEEeCcccCcCCC
Confidence 00 1124689999999999999998763 799999999999888654
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.5e-07 Score=73.82 Aligned_cols=105 Identities=12% Similarity=0.096 Sum_probs=75.6
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||.... .++++..+++|+.|+..+++.+.+. ...++||++||....+.... ....|
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~----------~~~~E------- 141 (336)
T 2hun_A 80 VHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRE-NPEVRFVHVSTDEVYGDILK----------GSFTE------- 141 (336)
T ss_dssp EECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCCCSS----------SCBCT-------
T ss_pred EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEeccHHHHCCCCC----------CCcCC-------
Confidence 578887643 2567899999999999999999886 33479999999754221100 00000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.. ...+...|+.+|.+.+.+++.++.++ |++++.|.||.|.++...
T Consensus 142 ------------~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~ilrp~~v~g~~~~ 187 (336)
T 2hun_A 142 ------------ND--RLMPSSPYSATKAASDMLVLGWTRTY-------NLNASITRCTNNYGPYQF 187 (336)
T ss_dssp ------------TB--CCCCCSHHHHHHHHHHHHHHHHHHHT-------TCEEEEEEECEEESTTCC
T ss_pred ------------CC--CCCCCCccHHHHHHHHHHHHHHHHHh-------CCCEEEEeeeeeeCcCCC
Confidence 00 01124689999999999999998775 699999999999988753
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.61 E-value=1.4e-07 Score=74.06 Aligned_cols=119 Identities=11% Similarity=-0.068 Sum_probs=76.5
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccc--cChHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDC--VSERQLTD 75 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 75 (153)
||+||.... .++++..+++|+.|+..+++.+.+...+ ++||++||....+..... + +.+.+ .....
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~-~~iv~~SS~~v~g~~~~~----~-~~e~~~~~~~~~--- 148 (347)
T 1orr_A 78 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSN-CNIIYSSTNKVYGDLEQY----K-YNETETRYTCVD--- 148 (347)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT-CEEEEEEEGGGGTTCTTS----C-EEECSSCEEETT---
T ss_pred EECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-ceEEEeccHHHhCCCCcC----C-cccccccccccc---
Confidence 578887643 2568899999999999999999887643 699999997643211000 0 00000 00000
Q ss_pred HHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 76 MMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....+.... ...+...|+.+|.+.+.+++.++.++ |++++.|.||+|.++...
T Consensus 149 -------~~~~~~e~~--~~~~~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilrp~~v~g~~~~ 201 (347)
T 1orr_A 149 -------KPNGYDEST--QLDFHSPYGCSKGAADQYMLDYARIF-------GLNTVVFRHSSMYGGRQF 201 (347)
T ss_dssp -------CTTCBCTTS--CCCCCHHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECCEECTTCC
T ss_pred -------cccCccccC--CCCCCCchHHHHHHHHHHHHHHHHHh-------CCcEEEEccCceeCcCCC
Confidence 000000000 01124689999999999999998875 699999999999998754
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=98.60 E-value=1.2e-07 Score=74.24 Aligned_cols=128 Identities=18% Similarity=0.104 Sum_probs=78.5
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
||+||.....++++..+++|+.|+..+++.+.+. ...++||++||......+.... ....+.++......+... +
T Consensus 88 ih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~iv~~SS~~~~~~~~~~~-~~~~~~E~~~~~~~~~~~---~ 162 (342)
T 1y1p_A 88 AHIASVVSFSNKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPKPNV-EGIYLDEKSWNLESIDKA---K 162 (342)
T ss_dssp EECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCCTTC-CCCEECTTCCCHHHHHHH---H
T ss_pred EEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEeccHHHhcCCCCCC-CCcccCccccCchhhhhh---c
Confidence 5788876555567889999999999999998763 1237999999976532110000 000001111111111000 0
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
..... ....+...|+.||.+.+.+++.++.++.. +++++.|.||.+.++....
T Consensus 163 -~~~~~------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-----~~~~~~~rp~~v~g~~~~~ 215 (342)
T 1y1p_A 163 -TLPES------DPQKSLWVYAASKTEAELAAWKFMDENKP-----HFTLNAVLPNYTIGTIFDP 215 (342)
T ss_dssp -HSCTT------STTHHHHHHHHHHHHHHHHHHHHHHHHCC-----SSEEEEEEESEEECCCSCT
T ss_pred -ccccc------ccccchHHHHHHHHHHHHHHHHHHHhcCC-----CceEEEEcCCceECCCCCC
Confidence 00000 00001267999999999999999988754 6999999999999987653
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=1.3e-07 Score=75.48 Aligned_cols=91 Identities=15% Similarity=0.100 Sum_probs=73.0
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||.... ....+..+++|+.|+..+++++.+. .-+++|++||..... |
T Consensus 96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~--~v~~~V~~SS~~~~~-p------------------------ 148 (344)
T 2gn4_A 96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN--AISQVIALSTDKAAN-P------------------------ 148 (344)
T ss_dssp EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEECCGGGSS-C------------------------
T ss_pred EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC--CCCEEEEecCCccCC-C------------------------
Confidence 478887642 2346789999999999999998875 236999999865421 1
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|+.||++.+.+++.++.++... |+++++|.||.|.++.
T Consensus 149 --------------------~~~Y~~sK~~~E~~~~~~~~~~~~~----g~~~~~vRpg~v~g~~ 189 (344)
T 2gn4_A 149 --------------------INLYGATKLCSDKLFVSANNFKGSS----QTQFSVVRYGNVVGSR 189 (344)
T ss_dssp --------------------CSHHHHHHHHHHHHHHHGGGCCCSS----CCEEEEECCCEETTCT
T ss_pred --------------------ccHHHHHHHHHHHHHHHHHHHhCCC----CcEEEEEEeccEECCC
Confidence 3689999999999999999888766 8999999999998764
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=3e-07 Score=71.99 Aligned_cols=106 Identities=19% Similarity=0.154 Sum_probs=73.8
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... ++++..+++|+.|++.+++.+.. +...++||++||....+.... ..+.
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~~~~~~iv~~SS~~vyg~~~~----------~~~~-------- 140 (345)
T 2z1m_A 80 YNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRT-VKPDTKFYQASTSEMFGKVQE----------IPQT-------- 140 (345)
T ss_dssp EECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHH-HCTTCEEEEEEEGGGGCSCSS----------SSBC--------
T ss_pred EECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHH-hCCCceEEEEechhhcCCCCC----------CCCC--------
Confidence 5888876432 56889999999999999999875 333479999999764321100 0000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc---cccCCCCeEEEEeeCCcccCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD---CELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
... ...+...|+.+|.+.+.+++.++.++. .. ++.++.+.||.+.|.+
T Consensus 141 -----------e~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~----~r~~~~~gpg~~~~~~ 191 (345)
T 2z1m_A 141 -----------EKT--PFYPRSPYAVAKLFGHWITVNYREAYNMFACS----GILFNHESPLRGIEFV 191 (345)
T ss_dssp -----------TTS--CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEE----EEECCEECTTSCTTSH
T ss_pred -----------ccC--CCCCCChhHHHHHHHHHHHHHHHHHhCCceEe----eeeeeecCCCCCCcch
Confidence 000 011246899999999999999998875 33 5677889999887764
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=7.9e-08 Score=93.39 Aligned_cols=86 Identities=13% Similarity=-0.035 Sum_probs=63.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||+... .++|++++++|+.|++++++.+.+.|.+.++||++||..+ .+.++
T Consensus 1969 VnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g------------------ 2030 (2512)
T 2vz8_A 1969 FNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAG------------------ 2030 (2512)
T ss_dssp EECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTT------------------
T ss_pred EECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCC------------------
Confidence 689997532 2789999999999999999999999877799999999888 54332
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCc
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGY 137 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~ 137 (153)
...|+++|+++.+|++.++.+ |....++..|.
T Consensus 2031 -------------------------~~~Y~aaKaal~~l~~~rr~~--------Gl~~~a~~~g~ 2062 (2512)
T 2vz8_A 2031 -------------------------QANYGFANSAMERICEKRRHD--------GLPGLAVQWGA 2062 (2512)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHT--------TSCCCEEEECC
T ss_pred -------------------------cHHHHHHHHHHHHHHHHHHHC--------CCcEEEEEccC
Confidence 478999999999999976654 45555555553
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=1.1e-06 Score=69.54 Aligned_cols=108 Identities=19% Similarity=0.072 Sum_probs=75.8
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||.... .++++..+++|+.|+..+++.+.+. ...+++|++||....+..... ....|
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~vyg~~~~~---------~~~~E------- 147 (357)
T 1rkx_A 85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHV-GGVKAVVNITSDKCYDNKEWI---------WGYRE------- 147 (357)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-CCCCEEEEECCGGGBCCCCSS---------SCBCT-------
T ss_pred EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEecCHHHhCCCCcC---------CCCCC-------
Confidence 578885422 3567899999999999999998763 335799999997643211000 00000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc------cccCCCCeEEEEeeCCcccCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD------CELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~------~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
.. ...+...|+.+|.+.+.+++.++.++. .. |++++.|.||.+.++..
T Consensus 148 ------------~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~----gi~~~~lrp~~v~G~~~ 201 (357)
T 1rkx_A 148 ------------NE--AMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQH----GTAVATVRAGNVIGGGD 201 (357)
T ss_dssp ------------TS--CBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHH----CCEEEEEECCCEECTTC
T ss_pred ------------CC--CCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccC----CceEEEEeeceeeCCCC
Confidence 00 011246899999999999999998874 45 79999999999988753
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=98.43 E-value=5.7e-07 Score=68.61 Aligned_cols=100 Identities=19% Similarity=0.100 Sum_probs=69.2
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCccccc-ccccHHHHhhhhccccChHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLS-QITNLELKKRLMEDCVSERQLTDMMYE 79 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (153)
||+||.. ..+.++..+++|+.++..+++.+.+. ..++||++||...... +.. ..+.|.
T Consensus 68 i~~a~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~----------~~~~E~-------- 126 (267)
T 3ay3_A 68 IHLGGVS-VERPWNDILQANIIGAYNLYEAARNL--GKPRIVFASSNHTIGYYPRT----------TRIDTE-------- 126 (267)
T ss_dssp EECCSCC-SCCCHHHHHHHTHHHHHHHHHHHHHT--TCCEEEEEEEGGGSTTSBTT----------SCBCTT--------
T ss_pred EECCcCC-CCCCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCHHHhCCCCCC----------CCCCCC--------
Confidence 4788876 33557899999999999999988652 2369999999765321 110 000100
Q ss_pred HHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc-cCC
Q psy16223 80 FMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV-ATN 141 (153)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v-~T~ 141 (153)
.. ..+...|+.+|.+++.+++.++.+ . |++++.|.||++ .++
T Consensus 127 -----------~~--~~~~~~Y~~sK~~~e~~~~~~~~~---~----gi~~~~lrp~~v~~~~ 169 (267)
T 3ay3_A 127 -----------VP--RRPDSLYGLSKCFGEDLASLYYHK---F----DIETLNIRIGSCFPKP 169 (267)
T ss_dssp -----------SC--CCCCSHHHHHHHHHHHHHHHHHHT---T----CCCEEEEEECBCSSSC
T ss_pred -----------CC--CCCCChHHHHHHHHHHHHHHHHHH---c----CCCEEEEeceeecCCC
Confidence 00 112468999999999999887643 3 799999999997 443
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=2.2e-06 Score=68.74 Aligned_cols=117 Identities=12% Similarity=0.025 Sum_probs=71.9
Q ss_pred CCCCCCCccH------HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHH
Q psy16223 1 MNRASTVPFA------IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLT 74 (153)
Q Consensus 1 innag~~~~~------~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (153)
||+||..... +.++.++++|+.|+..+++.+...- ...+||++||....+....+ +.+....+...
T Consensus 105 ih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~~~------~~E~~~~~~~~- 176 (404)
T 1i24_A 105 VHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPNID------IEEGYITITHN- 176 (404)
T ss_dssp EECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCSSC------BCSSEEEEEET-
T ss_pred EECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCCCCC------CCccccccccc-
Confidence 5788875322 3456789999999999999886541 12499999997543221100 00000000000
Q ss_pred HHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 75 DMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
... ........+...|+.||.+.+.+++.++.++ |++++.|.||.|.++..
T Consensus 177 --------~~~---~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------gi~~~ivrp~~v~Gp~~ 227 (404)
T 1i24_A 177 --------GRT---DTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-------GIRATDLNQGVVYGVKT 227 (404)
T ss_dssp --------TEE---EEEECCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEECSCC
T ss_pred --------ccc---ccccCCCCCCChhHHHHHHHHHHHHHHHHhc-------CCeEEEEecceeeCCCC
Confidence 000 0000011224689999999999999888765 69999999999988754
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=1.1e-06 Score=69.02 Aligned_cols=113 Identities=12% Similarity=0.044 Sum_probs=74.3
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCccccccccc--HHHHhhhhccccChHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITN--LELKKRLMEDCVSERQLTD 75 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 75 (153)
||+||..... ++++..+++|+.|+..+++.+.+. +++||++||....+..... ...........+.|
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E----- 151 (348)
T 1oc2_A 80 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY---DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTA----- 151 (348)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCT-----
T ss_pred EECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh---CCeEEEecccceeCCCcccccccccccccCCCcCC-----
Confidence 5788876432 567889999999999999998875 3599999997643211000 00000000000000
Q ss_pred HHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 76 MMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.. ...+...|+.+|.+.+.+++.++.++ |++++.|.||.+.++...
T Consensus 152 --------------~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~-------gi~~~ilrp~~v~G~~~~ 197 (348)
T 1oc2_A 152 --------------ET--NYNPSSPYSSTKAASDLIVKAWVRSF-------GVKATISNCSNNYGPYQH 197 (348)
T ss_dssp --------------TS--CCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECCEESTTCC
T ss_pred --------------CC--CCCCCCccHHHHHHHHHHHHHHHHHh-------CCCEEEEeeceeeCCCCC
Confidence 00 01124689999999999999988765 699999999999888753
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=2.1e-06 Score=66.55 Aligned_cols=104 Identities=15% Similarity=-0.008 Sum_probs=73.1
Q ss_pred CCCCCCCc---cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVP---FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~---~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||... ..+.++..+++|+.|+..+++.+... ..++||++||....+.... ....
T Consensus 67 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~vyg~~~~----------~~~~-------- 126 (312)
T 3ko8_A 67 FHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT--GVRTVVFASSSTVYGDADV----------IPTP-------- 126 (312)
T ss_dssp EECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCSS----------SSBC--------
T ss_pred EECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeCcHHHhCCCCC----------CCCC--------
Confidence 47787532 23568899999999999999987442 2358999999765322110 0000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.. ....+...|+.+|.+.+.+++.++.++ |++++.|.||.+.++...
T Consensus 127 -----------e~--~~~~p~~~Y~~sK~~~e~~~~~~~~~~-------g~~~~~lrp~~v~g~~~~ 173 (312)
T 3ko8_A 127 -----------EE--EPYKPISVYGAAKAAGEVMCATYARLF-------GVRCLAVRYANVVGPRLR 173 (312)
T ss_dssp -----------TT--SCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEECTTCC
T ss_pred -----------CC--CCCCCCChHHHHHHHHHHHHHHHHHHh-------CCCEEEEeeccccCcCCC
Confidence 00 011224789999999999999998876 699999999999988643
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=3.3e-06 Score=66.75 Aligned_cols=104 Identities=15% Similarity=0.046 Sum_probs=74.1
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||.... .++++..+++|+.++..+++.+.+. .-+++|++||......... ..+.|.
T Consensus 107 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~----------~~~~E~------ 168 (352)
T 1sb8_A 107 LHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDHPG----------LPKVED------ 168 (352)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCC----------SSBCTT------
T ss_pred EECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhcCCCCC----------CCCCCC------
Confidence 578887643 2568899999999999999988653 2368999999765321100 000000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....+...|+.+|.+.+.+++.++.++ |++++.|.||.+.++...
T Consensus 169 ---------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------g~~~~ilRp~~v~G~~~~ 213 (352)
T 1sb8_A 169 ---------------TIGKPLSPYAVTKYVNELYADVFSRCY-------GFSTIGLRYFNVFGRRQD 213 (352)
T ss_dssp ---------------CCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCCEEEEECCEECTTCC
T ss_pred ---------------CCCCCCChhHHHHHHHHHHHHHHHHHc-------CCCEEEEEECceeCcCCC
Confidence 001224689999999999999988774 699999999999888654
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.6e-06 Score=70.54 Aligned_cols=110 Identities=15% Similarity=0.019 Sum_probs=70.2
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
|||||.....+.++..+++|+.|+..+++.+.+ ...++|++||... +...... .....+.|+.
T Consensus 155 ih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~~v~~SS~~~-G~~~~~~-----~~~~~~~E~~-------- 217 (427)
T 4f6c_A 155 IHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISV-GTYFDID-----TEDVTFSEAD-------- 217 (427)
T ss_dssp EECCCCC-------CHHHHHHHHHHHHHHHHHH---TTCEEEEEEEGGG-GSEECSS-----CSCCEECTTC--------
T ss_pred EECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEEECchHh-CCCccCC-----CCCccccccc--------
Confidence 588888776678999999999999999999887 5579999999776 2110000 0000000000
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
......+...|+.+|.+.+.+++.++. . |++++.|.||.|-.+....
T Consensus 218 ----------~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~----g~~~~ivRpg~v~G~~~~~ 264 (427)
T 4f6c_A 218 ----------VYKGQLLTSPYTRSKFYSELKVLEAVN----N----GLDGRIVRVGNLTSPYNGR 264 (427)
T ss_dssp ----------SCSSCCCCSHHHHHHHHHHHHHHHHHH----T----TCCEEEEEECCEESCSSSC
T ss_pred ----------cccCCCCCCchHHHHHHHHHHHHHHHH----c----CCCEEEEeCCeeecCCCCC
Confidence 000001347899999999999988653 4 7999999999998876554
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=1.4e-06 Score=67.72 Aligned_cols=103 Identities=16% Similarity=0.090 Sum_probs=71.0
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-ccc-ccccHHHHhhhhccccChHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLS-QITNLELKKRLMEDCVSERQLTD 75 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~ 75 (153)
||+|+.... .++++..+++|+.|++.+++.+... ..++||++||..+ .+. ... ....|
T Consensus 71 i~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~~g~~~~~----------~~~~E----- 133 (311)
T 2p5y_A 71 SHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY--GVEKLVFASTGGAIYGEVPEG----------ERAEE----- 133 (311)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEHHHHHCCCCTT----------CCBCT-----
T ss_pred EECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCChhhcCCCCCC----------CCcCC-----
Confidence 477776543 2567889999999999999987542 2369999999722 221 000 00000
Q ss_pred HHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 76 MMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
. ....+...|+.||.+.+.+++.++.+. |++++.|.||.+.++..
T Consensus 134 --------------~--~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~~lrp~~v~Gp~~ 178 (311)
T 2p5y_A 134 --------------T--WPPRPKSPYAASKAAFEHYLSVYGQSY-------GLKWVSLRYGNVYGPRQ 178 (311)
T ss_dssp --------------T--SCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECEEECTTC
T ss_pred --------------C--CCCCCCChHHHHHHHHHHHHHHHHHHc-------CCCEEEEeeccccCcCC
Confidence 0 001124689999999999999988764 69999999999988764
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.28 E-value=5.3e-06 Score=64.40 Aligned_cols=103 Identities=19% Similarity=0.050 Sum_probs=71.1
Q ss_pred CCCCCCCc---cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVP---FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~---~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+|+... ..+.++..+++|+.|+..+++.+... ..++||++||....+.... ....
T Consensus 68 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~vyg~~~~----------~~~~-------- 127 (313)
T 3ehe_A 68 WHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA--GVSRIVFTSTSTVYGEAKV----------IPTP-------- 127 (313)
T ss_dssp EECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEECCGGGGCSCSS----------SSBC--------
T ss_pred EECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCchHHhCcCCC----------CCCC--------
Confidence 46676532 23568999999999999999885432 2369999999765321110 0000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
... ...+...|+.+|.+.+.+++.++.++ |++++.+.||.+..+..
T Consensus 128 -----------E~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~-------g~~~~ilRp~~v~G~~~ 173 (313)
T 3ehe_A 128 -----------EDY--PTHPISLYGASKLACEALIESYCHTF-------DMQAWIYRFANVIGRRS 173 (313)
T ss_dssp -----------TTS--CCCCCSHHHHHHHHHHHHHHHHHHHT-------TCEEEEEECSCEESTTC
T ss_pred -----------CCC--CCCCCCHHHHHHHHHHHHHHHHHHhc-------CCCEEEEeeccccCcCC
Confidence 000 11224789999999999999998876 69999999999977643
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=2.6e-06 Score=66.76 Aligned_cols=103 Identities=20% Similarity=0.120 Sum_probs=73.1
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... ++++..+++|+.|+..+++.+.+.. -++||++||....+.... ..+.+
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~--~~~~v~~SS~~vyg~~~~----------~~~~E------- 141 (337)
T 1r6d_A 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQVYGSIDS----------GSWTE------- 141 (337)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGCCCSS----------SCBCT-------
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEecchHHhCCCCC----------CCCCC-------
Confidence 5788876432 4678899999999999999987753 369999999754321100 00000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
.. ...+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++..
T Consensus 142 ------------~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~-------g~~~~ilrp~~v~G~~~ 186 (337)
T 1r6d_A 142 ------------SS--PLEPNSPYAASKAGSDLVARAYHRTY-------GLDVRITRCCNNYGPYQ 186 (337)
T ss_dssp ------------TS--CCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECEEECTTC
T ss_pred ------------CC--CCCCCCchHHHHHHHHHHHHHHHHHH-------CCCEEEEEeeeeECCCC
Confidence 00 01124789999999999999988764 68999999999988764
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=98.27 E-value=2.4e-06 Score=66.33 Aligned_cols=115 Identities=17% Similarity=0.107 Sum_probs=66.4
Q ss_pred CCCCCCCccH--HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA--IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~--~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+|+..... +.++.++++|+.|++.+++++.+.. ..++||++||..+ ...+... ..+.+........
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~-~~~~iV~~SS~~~~~~~~~~~----~~~~e~~~~~~~~---- 149 (322)
T 2p4h_X 79 FHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSK-TVKRFIYTSSGSAVSFNGKDK----DVLDESDWSDVDL---- 149 (322)
T ss_dssp EECCCCC--------CHHHHHHHHHHHHHHHHHTTCS-SCCEEEEEEEGGGTSCSSSCC----SEECTTCCCCHHH----
T ss_pred EEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccHHHcccCCCCC----eecCCccccchhh----
Confidence 4777654222 2245699999999999999987752 2369999999875 2211100 0000000000000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
..... .. .+.|+.||.+.+.+.+.++.+ . |++++.|.||.|.+++..
T Consensus 150 ---~~~~~---------p~-~~~Y~~sK~~~e~~~~~~~~~---~----gi~~~~lrp~~v~g~~~~ 196 (322)
T 2p4h_X 150 ---LRSVK---------PF-GWNYAVSKTLAEKAVLEFGEQ---N----GIDVVTLILPFIVGRFVC 196 (322)
T ss_dssp ---HHHHC---------CT-THHHHHHHHHHHHHHHHHHHH---T----TCCEEEEEECEEESCCCS
T ss_pred ---hcccC---------cc-cccHHHHHHHHHHHHHHHHHh---c----CCcEEEEcCCceECCCCC
Confidence 00000 00 126999999877766655443 3 799999999999998754
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=3e-06 Score=67.86 Aligned_cols=109 Identities=12% Similarity=0.042 Sum_probs=71.7
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||.... .++++..+++|+.|++.+++.+... ..++||++||....+.+.. ..... ....+.|+
T Consensus 98 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~iv~~SS~~v~g~~~~-~~~~~--~~~~~~E~------ 166 (397)
T 1gy8_A 98 VHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH--KCDKIIFSSSAAIFGNPTM-GSVST--NAEPIDIN------ 166 (397)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGTBSCCC--------CCCCBCTT------
T ss_pred EECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh--CCCEEEEECCHHHhCCCCc-ccccc--cccCcCcc------
Confidence 578887643 2568899999999999999986432 2368999999654322110 00000 00001100
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
.. ..+...|+.+|.+.+.+++.++.++ |++++.|.||.|..+.
T Consensus 167 -------------~~--~~p~~~Y~~sK~~~e~~~~~~~~~~-------gi~~~ilRp~~v~G~~ 209 (397)
T 1gy8_A 167 -------------AK--KSPESPYGESKLIAERMIRDCAEAY-------GIKGICLRYFNACGAH 209 (397)
T ss_dssp -------------SC--CBCSSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEECCC
T ss_pred -------------CC--CCCCCchHHHHHHHHHHHHHHHHHH-------CCcEEEEeccceeCCC
Confidence 00 1124689999999999999998876 6999999999887664
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.20 E-value=3.4e-06 Score=61.81 Aligned_cols=86 Identities=8% Similarity=-0.063 Sum_probs=65.9
Q ss_pred CCCCCCCcc-HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHH
Q psy16223 1 MNRASTVPF-AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYE 79 (153)
Q Consensus 1 innag~~~~-~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (153)
||+||.... .+.++..+++|+.++..+++.+.+. ..+++|++||......+
T Consensus 70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~-------------------------- 121 (215)
T 2a35_A 70 FCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGADAKS-------------------------- 121 (215)
T ss_dssp EECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTTC--------------------------
T ss_pred EECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc--CCCEEEEECCcccCCCC--------------------------
Confidence 477887643 3568899999999999999987653 23589999997764321
Q ss_pred HHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeE-EEEeeCCcccCCCC
Q psy16223 80 FMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-INAVHPGYVATNMS 143 (153)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~-v~~v~PG~v~T~~~ 143 (153)
...|+.+|.+++.+++. . |++ ++.|.||++.++..
T Consensus 122 ------------------~~~y~~sK~~~e~~~~~-------~----~~~~~~~vrp~~v~g~~~ 157 (215)
T 2a35_A 122 ------------------SIFYNRVKGELEQALQE-------Q----GWPQLTIARPSLLFGPRE 157 (215)
T ss_dssp ------------------SSHHHHHHHHHHHHHTT-------S----CCSEEEEEECCSEESTTS
T ss_pred ------------------ccHHHHHHHHHHHHHHH-------c----CCCeEEEEeCceeeCCCC
Confidence 36899999999887653 3 688 99999999988754
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=5.1e-06 Score=65.17 Aligned_cols=115 Identities=17% Similarity=0.112 Sum_probs=70.5
Q ss_pred CCCCCCCcc--HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF--AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~--~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+|+.... .+..+..+++|+.|+..+++++.+.. ..++||++||..+ ...+... ..+.++..... +.
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~riV~~SS~~~~~~~~~~~----~~~~E~~~~~~--~~-- 152 (337)
T 2c29_D 82 FHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAK-TVRRLVFTSSAGTVNIQEHQL----PVYDESCWSDM--EF-- 152 (337)
T ss_dssp EECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHS-CCCEEEEECCGGGTSCSSSCC----SEECTTCCCCH--HH--
T ss_pred EEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEeeeHhhcccCCCCC----cccCcccCCch--hh--
Confidence 477776532 23455789999999999999887653 1369999999874 2211000 00000000000 00
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
..... -+.+.|+.||.+.+.+++.++++ . |++++.|.||.|.++...
T Consensus 153 ---~~~~~----------~~~~~Y~~sK~~~E~~~~~~~~~---~----gi~~~~lrp~~v~Gp~~~ 199 (337)
T 2c29_D 153 ---CRAKK----------MTAWMYFVSKTLAEQAAWKYAKE---N----NIDFITIIPTLVVGPFIM 199 (337)
T ss_dssp ---HHHHC----------CTTHHHHHHHHHHHHHHHHHHHH---H----TCCEEEEEECEEESCCSC
T ss_pred ---hcccC----------CccchHHHHHHHHHHHHHHHHHH---c----CCcEEEEeCCceECCCCC
Confidence 00000 01257999999999888776644 3 799999999999988643
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.18 E-value=2.9e-06 Score=66.66 Aligned_cols=105 Identities=19% Similarity=0.085 Sum_probs=70.7
Q ss_pred CCCCCCCcc--HHHHHHHHhhhhhHHHHHHHHHhhhhc---CCccEEEecCCcccccccccHHHHhhhhccccChHHHHH
Q psy16223 1 MNRASTVPF--AIQAEKTILTNYLGLVRTCVFLFPLLR---RHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTD 75 (153)
Q Consensus 1 innag~~~~--~~~~~~~~~vN~~g~~~l~~~~lp~l~---~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (153)
||+||.... .++++..+++|+.|+..+++.+.+... ..++||++||........ . ..+.|+
T Consensus 91 ih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~-~---------~~~~E~---- 156 (342)
T 2hrz_A 91 FHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPL-P---------YPIPDE---- 156 (342)
T ss_dssp EECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSC-C---------SSBCTT----
T ss_pred EECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCC-C---------CCcCCC----
Confidence 578887643 356889999999999999999877542 147999999986532210 0 000100
Q ss_pred HHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHh--ccccCCCCeEEEEee--CCcccC
Q psy16223 76 MMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKF--DCELGNQDKVINAVH--PGYVAT 140 (153)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~--~~~~~~~gi~v~~v~--PG~v~T 140 (153)
.. ..+...|+.+|.+.+.+++.++.+. ... .+|++.|. ||.+.+
T Consensus 157 ---------------~~--~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~----~ir~~~v~g~pg~~~~ 204 (342)
T 2hrz_A 157 ---------------FH--TTPLTSYGTQKAICELLLSDYSRRGFFDGI----GIRLPTICIRPGKPNA 204 (342)
T ss_dssp ---------------CC--CCCSSHHHHHHHHHHHHHHHHHHTTSCEEE----EEEECEETTCCSSCCC
T ss_pred ---------------CC--CCCcchHHHHHHHHHHHHHHHHHhcCCCce----eEEeeeEEecCCCCcc
Confidence 00 1124689999999999999988764 222 47777777 887554
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.18 E-value=1.8e-05 Score=61.94 Aligned_cols=103 Identities=11% Similarity=-0.058 Sum_probs=69.9
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
|||||..... +..+..+++|+.+++.+++.+... ..++||++||....+.+.. ..+.|
T Consensus 83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~----------~~~~e------- 143 (341)
T 3enk_A 83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER--AVKRIVFSSSATVYGVPER----------SPIDE------- 143 (341)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGBCSCSS----------SSBCT-------
T ss_pred EECccccccCccccChHHHHHHHHHHHHHHHHHHHhC--CCCEEEEEecceEecCCCC----------CCCCC-------
Confidence 5788876433 446688999999999887765331 2369999999665432110 00000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
... ..+...|+.+|.+.+.+++.++.++. +++++.+.||.+..+.
T Consensus 144 ------------~~~--~~~~~~Y~~sK~~~e~~~~~~~~~~~------~~~~~~lRp~~v~G~~ 188 (341)
T 3enk_A 144 ------------TFP--LSATNPYGQTKLMAEQILRDVEAADP------SWRVATLRYFNPVGAH 188 (341)
T ss_dssp ------------TSC--CBCSSHHHHHHHHHHHHHHHHHHHCT------TCEEEEEEECEEECCC
T ss_pred ------------CCC--CCCCChhHHHHHHHHHHHHHHhhcCC------CceEEEEeeccccCCc
Confidence 000 11246899999999999999988863 5899999999887664
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=7.3e-06 Score=65.65 Aligned_cols=111 Identities=13% Similarity=-0.006 Sum_probs=72.8
Q ss_pred CCCCCCCcc----HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHH
Q psy16223 1 MNRASTVPF----AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDM 76 (153)
Q Consensus 1 innag~~~~----~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (153)
||+||.... .++++..+++|+.|+..+++.+... .-.++|++||........... .....+.|+.
T Consensus 98 ih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~~V~~SS~~v~~~~~~~~-----~~~~~~~E~~---- 166 (379)
T 2c5a_A 98 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN--GIKRFFYASSACIYPEFKQLE-----TTNVSLKESD---- 166 (379)
T ss_dssp EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEGGGSCGGGSSS-----SSSCEECGGG----
T ss_pred EECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeehheeCCCCCCC-----ccCCCcCccc----
Confidence 578887643 3468899999999999999987542 225999999965432110000 0000001100
Q ss_pred HHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 77 MYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.....+...|+.+|.+.+.+++.++.+. |++++.|.||.+.++...
T Consensus 167 ---------------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilrp~~v~G~~~~ 212 (379)
T 2c5a_A 167 ---------------AWPAEPQDAFGLEKLATEELCKHYNKDF-------GIECRIGRFHNIYGPFGT 212 (379)
T ss_dssp ---------------GSSBCCSSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECCEECTTSC
T ss_pred ---------------CCCCCCCChhHHHHHHHHHHHHHHHHHH-------CCCEEEEEeCceeCcCCC
Confidence 0001124689999999999999988764 799999999999887643
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.08 E-value=8.7e-06 Score=63.67 Aligned_cols=105 Identities=12% Similarity=0.081 Sum_probs=65.1
Q ss_pred CCCCCCCcc-HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHH
Q psy16223 1 MNRASTVPF-AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYE 79 (153)
Q Consensus 1 innag~~~~-~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (153)
||+||.... .+.++..+++|+.++..+++.+.+. .-+++|++||........... . ..
T Consensus 82 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~----~-----~~---------- 140 (342)
T 2x4g_A 82 IFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA--RVPRILYVGSAYAMPRHPQGL----P-----GH---------- 140 (342)
T ss_dssp EEC------------CHHHHHHHHHHHHHHHHHHH--TCSCEEEECCGGGSCCCTTSS----C-----BC----------
T ss_pred EECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEECCHHhhCcCCCCC----C-----CC----------
Confidence 477776543 3568889999999999999998764 237999999977632211000 0 00
Q ss_pred HHHHhhcCCCccccCCC--CCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 80 FMDITKEHPRAHVAKGW--PDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 80 ~~~~~~~~~~~~~~~~~--~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
........ ....|+.+|.+.+.+++.++. . |++++.|.||.+.++..
T Consensus 141 ---------E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~----~----g~~~~ilrp~~v~g~~~ 189 (342)
T 2x4g_A 141 ---------EGLFYDSLPSGKSSYVLCKWALDEQAREQAR----N----GLPVVIGIPGMVLGELD 189 (342)
T ss_dssp ---------TTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH----T----TCCEEEEEECEEECSCC
T ss_pred ---------CCCCCCccccccChHHHHHHHHHHHHHHHhh----c----CCcEEEEeCCceECCCC
Confidence 00000010 046899999999999998875 2 58999999999988765
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.04 E-value=3.9e-05 Score=59.73 Aligned_cols=102 Identities=14% Similarity=0.080 Sum_probs=70.4
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... ++++..+++|+.++..+++.+... .-+++|++||....+.+.. ..+.|.
T Consensus 72 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~~~~~----------~~~~E~------ 133 (330)
T 2c20_A 72 MHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF--KVDKFIFSSTAATYGEVDV----------DLITEE------ 133 (330)
T ss_dssp EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGGCSCSS----------SSBCTT------
T ss_pred EECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc--CCCEEEEeCCceeeCCCCC----------CCCCcC------
Confidence 4778876432 567899999999999999886432 2368999999665322110 000100
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
. ...+...|+.+|.+.+.+++.++.+. |++++.+.||.+..+-
T Consensus 134 -------------~--~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~ilrp~~v~G~~ 176 (330)
T 2c20_A 134 -------------T--MTNPTNTYGETKLAIEKMLHWYSQAS-------NLRYKIFRYFNVAGAT 176 (330)
T ss_dssp -------------S--CCCCSSHHHHHHHHHHHHHHHHHHTS-------SCEEEEEECSEEECCC
T ss_pred -------------C--CCCCCChHHHHHHHHHHHHHHHHHHh-------CCcEEEEecCcccCCC
Confidence 0 01124789999999999999988764 6999999999887664
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=4.4e-06 Score=62.40 Aligned_cols=82 Identities=9% Similarity=-0.019 Sum_probs=58.0
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCccc-ccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 12 QAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGH-LSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 12 ~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
.+++++++|+.++..+++.+... ..++||++||..+. ....
T Consensus 101 ~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~------------------------------------ 142 (253)
T 1xq6_A 101 DGQYPEQVDWIGQKNQIDAAKVA--GVKHIVVVGSMGGTNPDHP------------------------------------ 142 (253)
T ss_dssp TTCSHHHHTTHHHHHHHHHHHHH--TCSEEEEEEETTTTCTTCG------------------------------------
T ss_pred ccccceeeeHHHHHHHHHHHHHc--CCCEEEEEcCccCCCCCCc------------------------------------
Confidence 34567899999999998887543 23699999998762 1100
Q ss_pred cccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 91 HVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 91 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.. .+....|+.+|.+++.+++. . |++++.|.||++.++...
T Consensus 143 ~~--~~~~~~y~~sK~~~e~~~~~-------~----~i~~~~vrpg~v~~~~~~ 183 (253)
T 1xq6_A 143 LN--KLGNGNILVWKRKAEQYLAD-------S----GTPYTIIRAGGLLDKEGG 183 (253)
T ss_dssp GG--GGGGCCHHHHHHHHHHHHHT-------S----SSCEEEEEECEEECSCSS
T ss_pred cc--cccchhHHHHHHHHHHHHHh-------C----CCceEEEecceeecCCcc
Confidence 00 01124588899999887652 4 799999999999988643
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.03 E-value=1.3e-05 Score=65.65 Aligned_cols=90 Identities=9% Similarity=-0.116 Sum_probs=73.4
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPR 89 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
+.+.+.+....++.+...+...+.|.+++++|.+|+... ..+|.
T Consensus 199 e~T~~vMg~s~~s~w~~al~~a~lla~G~siva~SYiGse~t~P~----------------------------------- 243 (401)
T 4ggo_A 199 AATVKVMGGEDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQAL----------------------------------- 243 (401)
T ss_dssp HHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHHH-----------------------------------
T ss_pred HHHHHHHhhhHHHHHHHHHHhhhcccCCceEEEEeccCcceeecC-----------------------------------
Confidence 345566667888888999999999999999999999877 44433
Q ss_pred ccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 90 AHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 90 ~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
++ ...++.+|++++..+|.|+.++. ++++++++||.+.|..+...+
T Consensus 244 -----Y~-~G~mG~AKaaLEa~~r~La~eL~------~~~a~v~v~~a~vT~AssaIP 289 (401)
T 4ggo_A 244 -----YR-KGTIGKAKEHLEATAHRLNKENP------SIRAFVSVNKGLVTRASAVIP 289 (401)
T ss_dssp -----HT-TSHHHHHHHHHHHHHHHHHHHCT------TEEEEEEECCCCCCTTGGGSS
T ss_pred -----CC-ccHHHHHHHHHHHHHHHHHHhcC------CCcEEEEEcCccccchhhcCC
Confidence 11 24789999999999999999985 589999999999999876654
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=3.2e-05 Score=60.67 Aligned_cols=102 Identities=12% Similarity=-0.075 Sum_probs=69.7
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||.... .++++..+++|+.|+..+++.+... ..++||++||....+.+.. ..+.|+
T Consensus 86 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~----------~~~~E~------ 147 (348)
T 1ek6_A 86 IHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH--GVKNLVFSSSATVYGNPQY----------LPLDEA------ 147 (348)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGGCSCSS----------SSBCTT------
T ss_pred EECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh--CCCEEEEECcHHHhCCCCC----------CCcCCC------
Confidence 578887643 2567899999999999999875432 2369999999765322100 000000
Q ss_pred HHHHHHhhcCCCccccCCCC-CchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWP-DSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
.. ..+ ...|+.+|.+.+.+++.++.+ .. ++.+..+.|+.+-.+
T Consensus 148 -------------~~--~~p~~~~Y~~sK~~~e~~~~~~~~~--~~----~~~~~~lR~~~v~G~ 191 (348)
T 1ek6_A 148 -------------HP--TGGCTNPYGKSKFFIEEMIRDLCQA--DK----TWNAVLLRYFNPTGA 191 (348)
T ss_dssp -------------SC--CCCCSSHHHHHHHHHHHHHHHHHHH--CT----TCEEEEEEECEEECC
T ss_pred -------------CC--CCCCCCchHHHHHHHHHHHHHHHhc--CC----CcceEEEeeccccCC
Confidence 00 112 468999999999999999887 33 689999999877655
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.5e-05 Score=63.09 Aligned_cols=102 Identities=13% Similarity=0.023 Sum_probs=71.3
Q ss_pred CCCCCCCcc-HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHH
Q psy16223 1 MNRASTVPF-AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYE 79 (153)
Q Consensus 1 innag~~~~-~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (153)
||+||.... .++++..+++|+.|+..+++.+.+. .. ++|++||....+.... ..+.|+
T Consensus 120 ih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~-r~V~~SS~~v~g~~~~----------~~~~E~-------- 178 (357)
T 2x6t_A 120 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGRTS----------DFIESR-------- 178 (357)
T ss_dssp EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGCSCSS----------CCCSSG--------
T ss_pred EECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEcchHHhCCCCC----------CCcCCc--------
Confidence 477876543 3568899999999999999998763 23 9999999765321100 000110
Q ss_pred HHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 80 FMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
. ...+...|+.+|.+.+.+++.++.+. |+.++.|.||.|..+..
T Consensus 179 -----------~--~~~p~~~Y~~sK~~~E~~~~~~~~~~-------g~~~~ilRp~~v~Gp~~ 222 (357)
T 2x6t_A 179 -----------E--YEKPLNVFGYSKFLFDEYVRQILPEA-------NSQIVGFRYFNVYGPRE 222 (357)
T ss_dssp -----------G--GCCCSSHHHHHHHHHHHHHHHHGGGC-------SSCEEEEEECEEESSSC
T ss_pred -----------C--CCCCCChhHHHHHHHHHHHHHHHHHc-------CCCEEEEecCeEECCCC
Confidence 0 01124689999999999999887653 69999999999987653
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.99 E-value=4.3e-05 Score=60.76 Aligned_cols=100 Identities=13% Similarity=-0.046 Sum_probs=67.3
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcccccccccHHHHhhhhccccChHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDM 76 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (153)
||+||..... ++++..+++|+.|+..+++.+.+...+ .++||++||......... ..+.|
T Consensus 107 ih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~----------~~~~E------ 170 (375)
T 1t2a_A 107 YNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQE----------IPQKE------ 170 (375)
T ss_dssp EECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSS----------SSBCT------
T ss_pred EECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCC----------CCCCc------
Confidence 5788876442 568899999999999999998876542 379999999765321100 00000
Q ss_pred HHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc
Q psy16223 77 MYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV 138 (153)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v 138 (153)
.. ...+...|+.+|.+.+.+++.++.++ ++.+..+.|+.+
T Consensus 171 -------------~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~i~r~~~~ 210 (375)
T 1t2a_A 171 -------------TT--PFYPRSPYGAAKLYAYWIVVNFREAY-------NLFAVNGILFNH 210 (375)
T ss_dssp -------------TS--CCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECCE
T ss_pred -------------cC--CCCCCChhHHHHHHHHHHHHHHHHHh-------CCCEEEEecccc
Confidence 00 01124689999999999999998875 455555555443
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.95 E-value=3.3e-05 Score=60.63 Aligned_cols=104 Identities=17% Similarity=0.121 Sum_probs=68.8
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... +.++..+++|+.|+..+++.+... .-.++|++||....+..... ..+.|+
T Consensus 103 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~v~~SS~~vy~~~~~~---------~~~~E~------ 165 (346)
T 4egb_A 103 VNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY--PHIKLVQVSTDEVYGSLGKT---------GRFTEE------ 165 (346)
T ss_dssp EECCCCC---------CHHHHHHTHHHHHHHHHHHHS--TTSEEEEEEEGGGGCCCCSS---------CCBCTT------
T ss_pred EECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCchHHhCCCCcC---------CCcCCC------
Confidence 4778776433 567889999999999999887654 23579999997553221000 000100
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
....+...|+.+|.+.+.+++.++.+. |+.++.+.||.+..+..
T Consensus 166 ---------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------g~~~~ilRp~~v~G~~~ 209 (346)
T 4egb_A 166 ---------------TPLAPNSPYSSSKASADMIALAYYKTY-------QLPVIVTRCSNNYGPYQ 209 (346)
T ss_dssp ---------------SCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECEEESTTC
T ss_pred ---------------CCCCCCChhHHHHHHHHHHHHHHHHHh-------CCCEEEEeecceeCcCC
Confidence 011224789999999999999988774 68999999999877654
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=1.1e-05 Score=63.32 Aligned_cols=96 Identities=14% Similarity=0.058 Sum_probs=63.6
Q ss_pred CCCCCCCcc--HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHH
Q psy16223 1 MNRASTVPF--AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 1 innag~~~~--~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
|||||.... .++++ +++|+.|++.+++.+... ..++||++||.......... ...+.|
T Consensus 93 ih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~--------~~~~~E-------- 152 (330)
T 2pzm_A 93 VHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA--GVKRLLNFQTALCYGRPATV--------PIPIDS-------- 152 (330)
T ss_dssp EECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH--TCSEEEEEEEGGGGCSCSSS--------SBCTTC--------
T ss_pred EECCccCCCccccChh--HHHHHHHHHHHHHHHHHc--CCCEEEEecCHHHhCCCccC--------CCCcCC--------
Confidence 578887643 34555 999999999999998742 34699999998653221000 000000
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeE-EEEeeCCc
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKV-INAVHPGY 137 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~-v~~v~PG~ 137 (153)
.-.+...|+.+|.+++.+++.+ ++... .+| .+.+.||.
T Consensus 153 ---------------~~~~~~~Y~~sK~~~e~~~~~~--~~~~~----~iR~~~v~gp~~ 191 (330)
T 2pzm_A 153 ---------------PTAPFTSYGISKTAGEAFLMMS--DVPVV----SLRLANVTGPRL 191 (330)
T ss_dssp ---------------CCCCCSHHHHHHHHHHHHHHTC--SSCEE----EEEECEEECTTC
T ss_pred ---------------CCCCCChHHHHHHHHHHHHHHc--CCCEE----EEeeeeeECcCC
Confidence 0012478999999999999887 55444 677 67888885
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=97.94 E-value=3.5e-05 Score=60.18 Aligned_cols=109 Identities=12% Similarity=-0.004 Sum_probs=70.5
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||.... .++++..+++|+.++..+++.+... +.++|++||....+.... ..+.+....
T Consensus 72 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~v~~SS~~v~g~~~~----------~~~~e~~~~--- 135 (345)
T 2bll_A 72 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY---RKRIIFPSTSEVYGMCSD----------KYFDEDHSN--- 135 (345)
T ss_dssp EECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT---TCEEEEECCGGGGBTCCC----------SSBCTTTCC---
T ss_pred EEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh---CCeEEEEecHHHcCCCCC----------CCcCCcccc---
Confidence 477887543 2467889999999999998887552 379999999654321100 000000000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
....+...+...|+.+|.+.+.+++.++.+. |++++.|.||.+..+..
T Consensus 136 -----------~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~ilrp~~v~G~~~ 183 (345)
T 2bll_A 136 -----------LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-------GLQFTLFRPFNWMGPRL 183 (345)
T ss_dssp -----------CBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECSEECSSC
T ss_pred -----------cccCcccCcccccHHHHHHHHHHHHHHHHhc-------CCCEEEEcCCcccCCCc
Confidence 0000000112489999999999999988764 69999999999977654
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.93 E-value=2.7e-05 Score=59.97 Aligned_cols=102 Identities=14% Similarity=0.039 Sum_probs=70.3
Q ss_pred CCCCCCCcc-HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHH
Q psy16223 1 MNRASTVPF-AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYE 79 (153)
Q Consensus 1 innag~~~~-~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (153)
||+||.... .++++..+++|+.|+..+++.+... .- ++|++||....+.... ..+.|.
T Consensus 73 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~v~~SS~~v~g~~~~----------~~~~E~-------- 131 (310)
T 1eq2_A 73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGRTS----------DFIESR-------- 131 (310)
T ss_dssp EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGTTCCS----------CBCSSG--------
T ss_pred EECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEeeHHHhCCCCC----------CCCCCC--------
Confidence 477776543 3467889999999999999987653 23 9999999754321100 000100
Q ss_pred HHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 80 FMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
. ...+...|+.+|.+.+.+++.++.+ . |+.++.|.||.+..+..
T Consensus 132 -----------~--~~~p~~~Y~~sK~~~e~~~~~~~~~---~----g~~~~~lrp~~v~G~~~ 175 (310)
T 1eq2_A 132 -----------E--YEKPLNVYGYSKFLFDEYVRQILPE---A----NSQIVGFRYFNVYGPRE 175 (310)
T ss_dssp -----------G--GCCCSSHHHHHHHHHHHHHHHHGGG---C----SSCEEEEEECEEESSSC
T ss_pred -----------C--CCCCCChhHHHHHHHHHHHHHHHHH---c----CCCEEEEeCCcEECcCC
Confidence 0 0122468999999999999988765 2 79999999999887653
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=97.92 E-value=2.3e-05 Score=57.87 Aligned_cols=92 Identities=12% Similarity=0.069 Sum_probs=63.1
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
|||||... ...+++|+.++..+++.+... .-++||++||..+...... .+ +..
T Consensus 68 i~~ag~~~-----~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~-------------~e---~~~---- 120 (219)
T 3dqp_A 68 INVSGSGG-----KSLLKVDLYGAVKLMQAAEKA--EVKRFILLSTIFSLQPEKW-------------IG---AGF---- 120 (219)
T ss_dssp EECCCCTT-----SSCCCCCCHHHHHHHHHHHHT--TCCEEEEECCTTTTCGGGC-------------CS---HHH----
T ss_pred EECCcCCC-----CCcEeEeHHHHHHHHHHHHHh--CCCEEEEECcccccCCCcc-------------cc---ccc----
Confidence 46777664 337899999999998887431 2369999999776321110 11 000
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.+...|+.+|.+.+.+.+ ... |++++.|.||++.++...
T Consensus 121 ---------------~~~~~Y~~sK~~~e~~~~------~~~----~i~~~ilrp~~v~g~~~~ 159 (219)
T 3dqp_A 121 ---------------DALKDYYIAKHFADLYLT------KET----NLDYTIIQPGALTEEEAT 159 (219)
T ss_dssp ---------------HHTHHHHHHHHHHHHHHH------HSC----CCEEEEEEECSEECSCCC
T ss_pred ---------------ccccHHHHHHHHHHHHHH------hcc----CCcEEEEeCceEecCCCC
Confidence 013689999999988876 234 799999999999887543
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=2.9e-05 Score=61.04 Aligned_cols=107 Identities=18% Similarity=0.019 Sum_probs=70.0
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... ++++..+++|+.|+..+++.+... +.++|++||....+.... ..+.|..+
T Consensus 96 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~v~g~~~~----------~~~~E~~~---- 158 (343)
T 2b69_A 96 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV---GARLLLASTSEVYGDPEV----------HPQSEDYW---- 158 (343)
T ss_dssp EECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEEEGGGGBSCSS----------SSBCTTCC----
T ss_pred EECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCcEEEECcHHHhCCCCC----------CCCccccc----
Confidence 4777765432 357788999999999999887653 359999999654321100 00000000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
.. .....+...|+.+|.+.+.+++.++.+. |+.++.+.||.+..+..
T Consensus 159 -----------~~-~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilrp~~v~G~~~ 205 (343)
T 2b69_A 159 -----------GH-VNPIGPRACYDEGKRVAETMCYAYMKQE-------GVEVRVARIFNTFGPRM 205 (343)
T ss_dssp -----------CB-CCSSSTTHHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECCEECTTC
T ss_pred -----------cc-CCCCCCCCchHHHHHHHHHHHHHHHHHh-------CCcEEEEEEcceeCcCC
Confidence 00 0001123679999999999999888654 69999999999887753
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=4.4e-05 Score=60.96 Aligned_cols=109 Identities=16% Similarity=0.048 Sum_probs=69.0
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... ++++..+++|+.++..+++.+... ..-.++|++||....+.... .+ +.
T Consensus 104 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~V~~SS~~vyg~~~~----~~-~~------------- 164 (377)
T 2q1s_A 104 FHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHF-KRLKKVVYSAAGCSIAEKTF----DD-AK------------- 164 (377)
T ss_dssp EECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTC-SSCCEEEEEEEC------------------------------
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCCHHHcCCCCC----CC-cC-------------
Confidence 4778876432 467889999999999999887542 01258999999654321100 00 00
Q ss_pred HHHHHHhhcCCCccccCC-CCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKG-WPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
..+ ....... .+...|+.+|.+.+.+++.++.+. |++++.|.||.+..+..
T Consensus 165 -----~~E---~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilRp~~v~G~~~ 216 (377)
T 2q1s_A 165 -----ATE---ETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH-------QLPTVRARFQNVYGPGE 216 (377)
T ss_dssp -------C---CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECCEECTTC
T ss_pred -----ccc---ccccccccCCCCchHHHHHHHHHHHHHHHHHh-------CCCEEEEeeccEECCCC
Confidence 000 0000000 124689999999999999988764 69999999999988764
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=97.90 E-value=3.4e-05 Score=59.49 Aligned_cols=103 Identities=11% Similarity=-0.003 Sum_probs=70.0
Q ss_pred CCCCCCCccH--HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHH
Q psy16223 1 MNRASTVPFA--IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 1 innag~~~~~--~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
||+||..... ++++..+++|+.++..+++.+... .-+++|++||.......... ....
T Consensus 73 ih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~---------~~~~--------- 132 (312)
T 2yy7_A 73 YLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK--KIKKIFWPSSIAVFGPTTPK---------ENTP--------- 132 (312)
T ss_dssp EECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT--SCSEEECCEEGGGCCTTSCS---------SSBC---------
T ss_pred EECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHHhCCCCCC---------CCcc---------
Confidence 4778775432 567889999999999999887652 23589999997653211000 0000
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
.. ....+...|+.+|.+.+.+++.++.+. |++++.+.||.+..+.
T Consensus 133 ----------e~--~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~~lrp~~v~g~~ 177 (312)
T 2yy7_A 133 ----------QY--TIMEPSTVYGISKQAGERWCEYYHNIY-------GVDVRSIRYPGLISWS 177 (312)
T ss_dssp ----------SS--CBCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEECEEECEEECSS
T ss_pred ----------cc--CcCCCCchhHHHHHHHHHHHHHHHHhc-------CCcEEEEeCCeEecCC
Confidence 00 001124689999999999999888664 6999999999887643
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=4e-05 Score=60.13 Aligned_cols=101 Identities=17% Similarity=0.063 Sum_probs=68.1
Q ss_pred CCCCCCCcc-HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHH
Q psy16223 1 MNRASTVPF-AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYE 79 (153)
Q Consensus 1 innag~~~~-~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (153)
||+|+.... .+.++..+++|+.|+..+++.+.. ..-++||++||....+..... ...+.+
T Consensus 82 ih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~V~~SS~~vyg~~~~~--------~~~~~E--------- 142 (347)
T 4id9_A 82 LHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASA--AGVRRFVFASSGEVYPENRPE--------FLPVTE--------- 142 (347)
T ss_dssp EECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGGTTTTSCS--------SSSBCT---------
T ss_pred EECCcccCcchhhHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEECCHHHhCCCCCC--------CCCcCC---------
Confidence 467776533 345699999999999999988754 123599999996543210000 000000
Q ss_pred HHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCccc
Q psy16223 80 FMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVA 139 (153)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~ 139 (153)
.. ...+...|+.+|.+.+.+++.++.+. |+.++.|.|+.+.
T Consensus 143 ----------~~--~~~~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilRp~~v~ 183 (347)
T 4id9_A 143 ----------DH--PLCPNSPYGLTKLLGEELVRFHQRSG-------AMETVILRFSHTQ 183 (347)
T ss_dssp ----------TS--CCCCCSHHHHHHHHHHHHHHHHHHHS-------SSEEEEEEECEEE
T ss_pred ----------CC--CCCCCChHHHHHHHHHHHHHHHHHhc-------CCceEEEccceEe
Confidence 00 11124789999999999999888763 6999999999886
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=1.8e-05 Score=58.47 Aligned_cols=69 Identities=12% Similarity=0.134 Sum_probs=47.2
Q ss_pred HHHHhhhhcCC--ccEEEecCCccc-ccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCccccCCCCCc-hhHH
Q psy16223 28 CVFLFPLLRRH--ARVVNLSSSAGH-LSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDS-AYAV 103 (153)
Q Consensus 28 ~~~~lp~l~~~--g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~ 103 (153)
++.+++.|++. ++||++||..+. ..+.. .. .+. .. . .. .|+.
T Consensus 88 ~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~---~~------------------~~~---~~--------~--~~~~y~~ 133 (221)
T 3r6d_A 88 MASIVKALSRXNIRRVIGVSMAGLSGEFPVA---LE------------------KWT---FD--------N--LPISYVQ 133 (221)
T ss_dssp HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH---HH------------------HHH---HH--------T--SCHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEeeceecCCCCcc---cc------------------ccc---cc--------c--cccHHHH
Confidence 78888888643 699999998763 22210 00 000 00 0 13 7999
Q ss_pred hHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 104 SKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 104 sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
+|.+++.+.+. . |++++.|+||++.++
T Consensus 134 ~K~~~e~~~~~-------~----~i~~~~vrpg~v~~~ 160 (221)
T 3r6d_A 134 GERQARNVLRE-------S----NLNYTILRLTWLYND 160 (221)
T ss_dssp HHHHHHHHHHH-------S----CSEEEEEEECEEECC
T ss_pred HHHHHHHHHHh-------C----CCCEEEEechhhcCC
Confidence 99999877653 4 799999999999988
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=97.85 E-value=8.6e-06 Score=63.77 Aligned_cols=117 Identities=24% Similarity=0.255 Sum_probs=65.6
Q ss_pred CCCCCCCccH--HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA--IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~--~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+|+..... +..++.+++|+.|++.+++++.+.. .-++||++||..+ ...+... . ...+.|+.+...
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~V~~SS~~~~~~~~~~~----~---~~~~~E~~~~~~- 155 (338)
T 2rh8_A 85 FHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAK-SVKRVILTSSAAAVTINQLDG----T---GLVVDEKNWTDI- 155 (338)
T ss_dssp EEESSCCCC---------CHHHHHHHHHHHHHHHHCT-TCCEEEEECCHHHHHHHHHTC----S---CCCCCTTTTTCC-
T ss_pred EEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEEEEEecHHHeecCCcCC----C---CcccChhhccch-
Confidence 4677765322 2234589999999999999887653 1368999999764 2111000 0 000111100000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.+. ..... ..+.|+.||.+.+.+++.++++ . |++++.|.||.|.++...
T Consensus 156 -~~~---------~~~~~-~~~~Y~~sK~~~E~~~~~~~~~---~----gi~~~~lrp~~v~Gp~~~ 204 (338)
T 2rh8_A 156 -EFL---------TSAKP-PTWGYPASKTLAEKAAWKFAEE---N----NIDLITVIPTLMAGSSLT 204 (338)
T ss_dssp -----------------C-CCCCCTTSCCHHHHHHHHHHHH---H----TCCEEEEEECEEESCCSS
T ss_pred -hhc---------cccCC-ccchHHHHHHHHHHHHHHHHHH---c----CCcEEEEeCCceECCCCC
Confidence 000 00000 0136999999998888776654 3 799999999999998654
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.84 E-value=7.4e-05 Score=59.05 Aligned_cols=88 Identities=20% Similarity=0.095 Sum_probs=60.2
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcccccccccHHHHhhhhccccChHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDM 76 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (153)
||+||.... .++++..+++|+.|+..+++.+.+...+ +++||++||....+.... ..+.+
T Consensus 83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~----------~~~~E------ 146 (372)
T 1db3_A 83 YNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQE----------IPQKE------ 146 (372)
T ss_dssp EECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCS----------SSBCT------
T ss_pred EECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCC----------CCCCc------
Confidence 578886532 2567889999999999999999876532 379999999755321100 00000
Q ss_pred HHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHh
Q psy16223 77 MYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKF 119 (153)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~ 119 (153)
.. ...+...|+.+|.+.+.+++.++.++
T Consensus 147 -------------~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~ 174 (372)
T 1db3_A 147 -------------TT--PFYPRSPYAVAKLYAYWITVNYRESY 174 (372)
T ss_dssp -------------TS--CCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------cC--CCCCCChHHHHHHHHHHHHHHHHHHh
Confidence 00 01124689999999999999998875
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.84 E-value=2.6e-05 Score=57.64 Aligned_cols=98 Identities=7% Similarity=-0.100 Sum_probs=63.2
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYE 79 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (153)
||+||..... ...+++|+.++..+++.+... .-.++|++||... ...+.... .
T Consensus 72 i~~a~~~~~~---~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~------~--------------- 125 (227)
T 3dhn_A 72 ISAFNPGWNN---PDIYDETIKVYLTIIDGVKKA--GVNRFLMVGGAGSLFIAPGLRL------M--------------- 125 (227)
T ss_dssp EECCCC---------CCSHHHHHHHHHHHHHHHT--TCSEEEEECCSTTSEEETTEEG------G---------------
T ss_pred EEeCcCCCCC---hhHHHHHHHHHHHHHHHHHHh--CCCEEEEeCChhhccCCCCCcc------c---------------
Confidence 4667665222 237889999998888876542 1258999999875 32221000 0
Q ss_pred HHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 80 FMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
.....+...|+.+|.+.+.+.+.++.+ . |++++.+.||++.++..
T Consensus 126 ------------~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~----~~~~~ilrp~~v~g~~~ 170 (227)
T 3dhn_A 126 ------------DSGEVPENILPGVKALGEFYLNFLMKE---K----EIDWVFFSPAADMRPGV 170 (227)
T ss_dssp ------------GTTCSCGGGHHHHHHHHHHHHHTGGGC---C----SSEEEEEECCSEEESCC
T ss_pred ------------cCCcchHHHHHHHHHHHHHHHHHHhhc---c----CccEEEEeCCcccCCCc
Confidence 001123478999999999888876653 3 79999999999877643
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=9.7e-05 Score=57.70 Aligned_cols=100 Identities=17% Similarity=0.002 Sum_probs=64.3
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... +.++..+++|+.|++.+++.+... ..++||++||....+.+.. ..+.+
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~----------~~~~e------- 138 (338)
T 1udb_A 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA--NVKNFIFSSSATVYGDNPK----------IPYVE------- 138 (338)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCCS----------SSBCT-------
T ss_pred EECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccHHHhCCCCC----------CCcCc-------
Confidence 5788875432 456788999999999998865331 2369999999754321100 00000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV 138 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v 138 (153)
...... ....|+.||.+++.+++.++.+. . |+.+..+.|+.+
T Consensus 139 ------------~~~~~~-~~~~Y~~sK~~~e~~~~~~~~~~--~----~~~~~ilR~~~v 180 (338)
T 1udb_A 139 ------------SFPTGT-PQSPYGKSKLMVEQILTDLQKAQ--P----DWSIALLRYFNP 180 (338)
T ss_dssp ------------TSCCCC-CSSHHHHHHHHHHHHHHHHHHHS--T----TCEEEEEEECEE
T ss_pred ------------ccCCCC-CCChHHHHHHHHHHHHHHHHHhc--C----CCceEEEeecee
Confidence 000000 14689999999999999998874 2 577777776544
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.81 E-value=3.7e-05 Score=60.91 Aligned_cols=99 Identities=15% Similarity=0.094 Sum_probs=64.2
Q ss_pred CCCCCCCcc-HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHH
Q psy16223 1 MNRASTVPF-AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYE 79 (153)
Q Consensus 1 innag~~~~-~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (153)
||+||.... .+.++..+++|+.|+..+++.+.. .+++||++||....+.... ...|+
T Consensus 95 ih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~---~~~~~V~~SS~~vyg~~~~-----------~~~E~-------- 152 (362)
T 3sxp_A 95 FHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARS---KKAKVIYASSAGVYGNTKA-----------PNVVG-------- 152 (362)
T ss_dssp EECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHH---TTCEEEEEEEGGGGCSCCS-----------SBCTT--------
T ss_pred EECCccCCccccCHHHHHHHHHHHHHHHHHHHHH---cCCcEEEeCcHHHhCCCCC-----------CCCCC--------
Confidence 578887643 367899999999999999998743 3567999999544332110 00000
Q ss_pred HHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEE-EEeeCCcc
Q psy16223 80 FMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVI-NAVHPGYV 138 (153)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v-~~v~PG~v 138 (153)
....+...|+.+|.+.+.+++.++.++... .+|. +.+-||..
T Consensus 153 -------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~----~lR~~~v~Gp~~~ 195 (362)
T 3sxp_A 153 -------------KNESPENVYGFSKLCMDEFVLSHSNDNVQV----GLRYFNVYGPREF 195 (362)
T ss_dssp -------------SCCCCSSHHHHHHHHHHHHHHHTTTTSCEE----EEEECSEESTTCG
T ss_pred -------------CCCCCCChhHHHHHHHHHHHHHHhccCCEE----EEEeCceeCcCCC
Confidence 011234689999999999999887764333 4555 34445543
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=6.1e-05 Score=58.25 Aligned_cols=99 Identities=17% Similarity=0.139 Sum_probs=65.2
Q ss_pred CCCCCCCcc--HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHH
Q psy16223 1 MNRASTVPF--AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 1 innag~~~~--~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
||+||.... .+.++..+++|+.|+..+++.+... .-+++|++||.......... ....
T Consensus 67 ih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~---------~~~~--------- 126 (317)
T 3ajr_A 67 FHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH--RVEKVVIPSTIGVFGPETPK---------NKVP--------- 126 (317)
T ss_dssp EECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGCCTTSCS---------SSBC---------
T ss_pred EECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc--CCCEEEEecCHHHhCCCCCC---------CCcc---------
Confidence 477876533 2567889999999999999987642 23599999997753211000 0000
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV 138 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v 138 (153)
.. ....+...|+.+|.+.+.+++.++.+. |++++.|.|+.+
T Consensus 127 ----------e~--~~~~p~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~~lR~~~~ 167 (317)
T 3ajr_A 127 ----------SI--TITRPRTMFGVTKIAAELLGQYYYEKF-------GLDVRSLRYPGI 167 (317)
T ss_dssp ----------SS--SCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEE
T ss_pred ----------cc--ccCCCCchHHHHHHHHHHHHHHHHHhc-------CCeEEEEecCcE
Confidence 00 011124789999999999999887653 689999975433
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=9.2e-05 Score=57.34 Aligned_cols=107 Identities=17% Similarity=0.095 Sum_probs=70.4
Q ss_pred CCCCCCCcc----HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHH
Q psy16223 1 MNRASTVPF----AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDM 76 (153)
Q Consensus 1 innag~~~~----~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (153)
||+||.... .+.++..+++|+.++..+++.+... .-.++|++||....+.... ..+.|..+
T Consensus 60 ih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~vyg~~~~----------~~~~E~~~--- 124 (321)
T 1e6u_A 60 YLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSCIYPKLAK----------QPMAESEL--- 124 (321)
T ss_dssp EECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGSCTTCC----------SSBCGGGT---
T ss_pred EEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEccHHHcCCCCC----------CCcCcccc---
Confidence 477877642 2457889999999999999887652 2258999999765321100 00111000
Q ss_pred HHHHHHHhhcCCCccccCCCC-CchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 77 MYEFMDITKEHPRAHVAKGWP-DSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
......+ ...|+.+|.+.+.+++.++.+. |+.++.|.||.+..+..
T Consensus 125 --------------~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilrp~~v~G~~~ 171 (321)
T 1e6u_A 125 --------------LQGTLEPTNEPYAIAKIAGIKLCESYNRQY-------GRDYRSVMPTNLYGPHD 171 (321)
T ss_dssp --------------TSSCCCGGGHHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEESTTC
T ss_pred --------------ccCCCCCCCCccHHHHHHHHHHHHHHHHHh-------CCCEEEEEeCCcCCcCC
Confidence 0000111 2489999999999999888654 69999999999877654
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0001 Score=57.43 Aligned_cols=102 Identities=18% Similarity=0.075 Sum_probs=67.0
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... ++++..+++|+.|+..+++.+... ...+++|++||....+.... ..+.|
T Consensus 91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~v~g~~~~----------~~~~E------- 152 (335)
T 1rpn_A 91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSEMFGLIQA----------ERQDE------- 152 (335)
T ss_dssp EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCSCSS----------SSBCT-------
T ss_pred EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHHHhCCCCC----------CCCCc-------
Confidence 4788876432 467899999999999999988654 11369999999655321100 00000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
.. ...+...|+.+|.+.+.+++.++.++ |+.+..+.|+.+..+
T Consensus 153 ------------~~--~~~p~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~i~r~~~v~Gp 195 (335)
T 1rpn_A 153 ------------NT--PFYPRSPYGVAKLYGHWITVNYRESF-------GLHASSGILFNHESP 195 (335)
T ss_dssp ------------TS--CCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECCEECT
T ss_pred ------------cc--CCCCCChhHHHHHHHHHHHHHHHHHc-------CCcEEEEeeCcccCC
Confidence 00 01124689999999999999988765 466666777665443
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00011 Score=57.69 Aligned_cols=104 Identities=16% Similarity=0.080 Sum_probs=71.1
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... ++++..+++|+.++..+++.+... .-.++|++||....+.... ..+.|+
T Consensus 105 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~v~~SS~~vyg~~~~----------~~~~E~------ 166 (351)
T 3ruf_A 105 LHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA--QVQSFTYAASSSTYGDHPA----------LPKVEE------ 166 (351)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCC----------SSBCTT------
T ss_pred EECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEecHHhcCCCCC----------CCCccC------
Confidence 4777765332 457789999999999999887543 1258999999765322110 000000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....+...|+.+|.+.+.+++.++.+. |+.++.+.||.+..+-..
T Consensus 167 ---------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------g~~~~ilRp~~v~G~~~~ 211 (351)
T 3ruf_A 167 ---------------NIGNPLSPYAVTKYVNEIYAQVYARTY-------GFKTIGLRYFNVFGRRQD 211 (351)
T ss_dssp ---------------CCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCCEEEEECSEESTTCC
T ss_pred ---------------CCCCCCChhHHHHHHHHHHHHHHHHHh-------CCCEEEEeeCceeCcCCC
Confidence 011224789999999999999988775 689999999988776543
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00011 Score=63.11 Aligned_cols=108 Identities=12% Similarity=0.009 Sum_probs=71.4
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||.... .++++..+++|+.|+..+++.+... +.++|++||....+.... ..+.++.
T Consensus 387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~---~~r~V~~SS~~vyg~~~~----------~~~~E~~----- 448 (660)
T 1z7e_A 387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY---RKRIIFPSTSEVYGMCSD----------KYFDEDH----- 448 (660)
T ss_dssp EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT---TCEEEEECCGGGGBTCCS----------SSBCTTT-----
T ss_pred EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh---CCEEEEEecHHHcCCCCC----------cccCCCc-----
Confidence 477887643 2567889999999999999887653 379999999655321110 0000000
Q ss_pred HHHHHHhhcCCCc-cccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 78 YEFMDITKEHPRA-HVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 78 ~~~~~~~~~~~~~-~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
+.. ..+...+...|+.||.+.+.+++.++.+. |++++.|.||.+..+..
T Consensus 449 ----------~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilRpg~v~Gp~~ 498 (660)
T 1z7e_A 449 ----------SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-------GLQFTLFRPFNWMGPRL 498 (660)
T ss_dssp ----------CCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECSEESTTS
T ss_pred ----------cccccCcccCCCCCcHHHHHHHHHHHHHHHHHc-------CCCEEEECCCcccCCCc
Confidence 000 00000123579999999999999988764 69999999999987754
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.0001 Score=58.65 Aligned_cols=88 Identities=20% Similarity=0.061 Sum_probs=61.9
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcccccccccHHHHhhhhccccChHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLT 74 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (153)
||+||.... .++++..+++|+.|+..+++.+.+...+ ++++|++||....+.... ...+
T Consensus 111 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-----------~~~E---- 175 (381)
T 1n7h_A 111 YNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-----------PQSE---- 175 (381)
T ss_dssp EECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-----------SBCT----
T ss_pred EECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-----------CCCC----
Confidence 578887654 2568899999999999999999887643 469999999765321100 0000
Q ss_pred HHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc
Q psy16223 75 DMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD 120 (153)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~ 120 (153)
... ..+...|+.+|.+.+.+++.++.++.
T Consensus 176 ---------------~~~--~~~~~~Y~~sK~~~E~~~~~~~~~~~ 204 (381)
T 1n7h_A 176 ---------------TTP--FHPRSPYAASKCAAHWYTVNYREAYG 204 (381)
T ss_dssp ---------------TSC--CCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---------------CCC--CCCCCchHHHHHHHHHHHHHHHHHhC
Confidence 000 11246899999999999999988763
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=97.72 E-value=2.8e-05 Score=60.24 Aligned_cols=98 Identities=13% Similarity=-0.069 Sum_probs=54.0
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||.... .++++..+++|+.|+..+++.+.+. ++++|++||........ ..+.|+
T Consensus 65 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~v~~~~~-----------~~~~E~------ 124 (315)
T 2ydy_A 65 VHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV---GAFLIYISSDYVFDGTN-----------PPYREE------ 124 (315)
T ss_dssp EECC-------------------CHHHHHHHHHHHHH---TCEEEEEEEGGGSCSSS-----------CSBCTT------
T ss_pred EECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEchHHHcCCCC-----------CCCCCC------
Confidence 477876533 3578899999999999999998763 45999999977532110 000000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVAT 140 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T 140 (153)
.. ..+...|+.+|.+.+.+++.++.++. .+|...|. |..++
T Consensus 125 -------------~~--~~~~~~Y~~sK~~~e~~~~~~~~~~~------~lR~~~v~-G~~~~ 165 (315)
T 2ydy_A 125 -------------DI--PAPLNLYGKTKLDGEKAVLENNLGAA------VLRIPILY-GEVEK 165 (315)
T ss_dssp -------------SC--CCCCSHHHHHHHHHHHHHHHHCTTCE------EEEECSEE-CSCSS
T ss_pred -------------CC--CCCcCHHHHHHHHHHHHHHHhCCCeE------EEeeeeee-CCCCc
Confidence 00 11246899999999999998765442 47777777 65555
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00014 Score=55.65 Aligned_cols=107 Identities=17% Similarity=0.066 Sum_probs=69.0
Q ss_pred CCCCCCCcc----HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHH
Q psy16223 1 MNRASTVPF----AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDM 76 (153)
Q Consensus 1 innag~~~~----~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (153)
||+|+..+. .+..+..+++|+.|+..+++.+... .-.++|++||....+.... ..+.|+.
T Consensus 66 ih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~v~~SS~~vyg~~~~----------~~~~E~~---- 129 (319)
T 4b8w_A 66 IHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV--GARKVVSCLSTCIFPDKTT----------YPIDETM---- 129 (319)
T ss_dssp EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEECCGGGSCSSCC----------SSBCGGG----
T ss_pred EECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEEcchhhcCCCCC----------CCccccc----
Confidence 477877542 2457788999999999998886443 1248999999764322110 0011110
Q ss_pred HHHHHHHhhcCCCccccCCCC-CchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 77 MYEFMDITKEHPRAHVAKGWP-DSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
.......+ ...|+.+|.+.+.+++.++.+. |+.++.+.||.+-.+-.
T Consensus 130 -------------~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilRp~~v~Gp~~ 177 (319)
T 4b8w_A 130 -------------IHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY-------GCTFTAVIPTNVFGPHD 177 (319)
T ss_dssp -------------GGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEECTTC
T ss_pred -------------cccCCCCCCcchHHHHHHHHHHHHHHHHHhh-------CCCEEEEeeccccCCCC
Confidence 00000111 2369999999999999887764 69999999998876644
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.67 E-value=6.8e-05 Score=56.70 Aligned_cols=91 Identities=15% Similarity=0.012 Sum_probs=61.1
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
|||||..... ++++..+++|+.++..+++.+.+ .++++|++||......... .+.|.
T Consensus 62 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~iv~~SS~~~~~~~~~-----------~~~e~------ 121 (273)
T 2ggs_A 62 INAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKV---IDSYIVHISTDYVFDGEKG-----------NYKEE------ 121 (273)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHH---TTCEEEEEEEGGGSCSSSC-----------SBCTT------
T ss_pred EECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHH---hCCeEEEEecceeEcCCCC-----------CcCCC------
Confidence 5788876542 57899999999999999999865 3469999999876321100 00000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEee
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVH 134 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~ 134 (153)
. ...+...|+.+|.+++.+++. +... .+|++.|.
T Consensus 122 -------------~--~~~~~~~Y~~sK~~~e~~~~~----~~~~----~iR~~~v~ 155 (273)
T 2ggs_A 122 -------------D--IPNPINYYGLSKLLGETFALQ----DDSL----IIRTSGIF 155 (273)
T ss_dssp -------------S--CCCCSSHHHHHHHHHHHHHCC----TTCE----EEEECCCB
T ss_pred -------------C--CCCCCCHHHHHHHHHHHHHhC----CCeE----EEeccccc
Confidence 0 011246899999999998877 2223 57777666
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.66 E-value=5.1e-05 Score=62.91 Aligned_cols=111 Identities=14% Similarity=0.170 Sum_probs=69.4
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
||+||.... +.++..+++|+.|+..+++.+... .-.++|++||......... ..+.++......
T Consensus 172 ih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~--~~~~~V~iSS~~v~~~~~~----------~~~~E~~~~~p~--- 235 (478)
T 4dqv_A 172 VDSAAMVNA-FPYHELFGPNVAGTAELIRIALTT--KLKPFTYVSTADVGAAIEP----------SAFTEDADIRVI--- 235 (478)
T ss_dssp EECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSS--SCCCEEEEEEGGGGTTSCT----------TTCCSSSCHHHH---
T ss_pred EECccccCC-cCHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEeehhhcCccCC----------CCcCCccccccc---
Confidence 578887765 667889999999999999887542 2258999999654221100 001111000000
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
. +.......+ ...|+.||.+.+.+++.++.+. |++++.|.||.|-.+
T Consensus 236 -----~-~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ivRpg~v~G~ 282 (478)
T 4dqv_A 236 -----S-PTRTVDGGW-AGGYGTSKWAGEVLLREANDLC-------ALPVAVFRCGMILAD 282 (478)
T ss_dssp -----C-CEEECCTTS-EECHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECEEECC
T ss_pred -----C-ccccccccc-ccchHHHHHHHHHHHHHHHHHh-------CCCeEEEECceeeCC
Confidence 0 000000001 2459999999999999887754 699999999998664
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00018 Score=59.89 Aligned_cols=110 Identities=15% Similarity=0.022 Sum_probs=67.5
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
||+|+.......++..+++|+.|+..+++.+.. ...++|++||... +...... .....+.|..
T Consensus 236 ih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iSS~~v-G~~~~~~-----~~~~~~~E~~-------- 298 (508)
T 4f6l_B 236 IHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISV-GTYFDID-----TEDVTFSEAD-------- 298 (508)
T ss_dssp EECCCC--------CCHHHHHHHHHHHHHHHHT---TTCEEEEEEESCT-TSEECTT-----CSCCEECTTC--------
T ss_pred EECCceecCCCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeCChhh-ccCCccC-----CcCccccccc--------
Confidence 578887766677889999999999999998876 4579999999776 2110000 0000001000
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
.. ....+...|+.+|.+.+.+.+..+. . |+.++.+.||.|-.+....
T Consensus 299 ---------~~-~~~~~~~~Y~~sK~~~E~~~~~~~~----~----gi~~~ilRp~~v~G~~~~~ 345 (508)
T 4f6l_B 299 ---------VY-KGQLLTSPYTRSKFYSELKVLEAVN----N----GLDGRIVRVGNLTSPYNGR 345 (508)
T ss_dssp ---------SC-SSBCCCSHHHHHHHHHHHHHHHHHH----T----TCEEEEEEECCEESCSSSC
T ss_pred ---------cc-ccccCCCcHHHHHHHHHHHHHHHHH----c----CCCEEEEecceeccCCCCC
Confidence 00 0001247899999999988887643 4 7999999999987776544
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00028 Score=54.57 Aligned_cols=103 Identities=16% Similarity=0.074 Sum_probs=69.3
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
||+|+..... .++..+++|+.++..+++.+... .-.++|++||....+.... ..+.|+
T Consensus 67 ih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~--~~~r~v~~SS~~vyg~~~~----------~~~~E~--------- 124 (311)
T 3m2p_A 67 VHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN--NISNIVYASTISAYSDETS----------LPWNEK--------- 124 (311)
T ss_dssp EECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGCCCGGG----------CSBCTT---------
T ss_pred EEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccHHHhCCCCC----------CCCCCC---------
Confidence 4677766444 57788999999999988887542 1257999999654322110 000000
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
....+...|+.+|.+.+.+++.++.+. |+.++.+.||.+..+...
T Consensus 125 ------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------g~~~~ilRp~~v~G~~~~ 169 (311)
T 3m2p_A 125 ------------ELPLPDLMYGVSKLACEHIGNIYSRKK-------GLCIKNLRFAHLYGFNEK 169 (311)
T ss_dssp ------------SCCCCSSHHHHHHHHHHHHHHHHHHHS-------CCEEEEEEECEEECSCC-
T ss_pred ------------CCCCCCchhHHHHHHHHHHHHHHHHHc-------CCCEEEEeeCceeCcCCC
Confidence 011224789999999999999888753 799999999998766543
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0003 Score=50.69 Aligned_cols=87 Identities=13% Similarity=-0.073 Sum_probs=56.2
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
||+||..... ...++|+.++..+++.+... ..+++|++||..........
T Consensus 72 i~~a~~~~~~----~~~~~n~~~~~~~~~~~~~~--~~~~~v~~Ss~~~~~~~~~~------------------------ 121 (206)
T 1hdo_A 72 IVLLGTRNDL----SPTTVMSEGARNIVAAMKAH--GVDKVVACTSAFLLWDPTKV------------------------ 121 (206)
T ss_dssp EECCCCTTCC----SCCCHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCTTCS------------------------
T ss_pred EECccCCCCC----CccchHHHHHHHHHHHHHHh--CCCeEEEEeeeeeccCcccc------------------------
Confidence 4667665431 12357888888877776542 23689999997653211000
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc-cCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV-ATNM 142 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v-~T~~ 142 (153)
......|+.+|.+++.+.+ .. |++++.|.||++ +++.
T Consensus 122 --------------~~~~~~y~~~K~~~e~~~~-------~~----~i~~~~lrp~~~~~~~~ 159 (206)
T 1hdo_A 122 --------------PPRLQAVTDDHIRMHKVLR-------ES----GLKYVAVMPPHIGDQPL 159 (206)
T ss_dssp --------------CGGGHHHHHHHHHHHHHHH-------HT----CSEEEEECCSEEECCCC
T ss_pred --------------cccchhHHHHHHHHHHHHH-------hC----CCCEEEEeCCcccCCCC
Confidence 0013679999999988874 24 799999999998 4443
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00023 Score=54.36 Aligned_cols=83 Identities=17% Similarity=0.184 Sum_probs=55.3
Q ss_pred CCCCCCCcc---HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPF---AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||.... .++++..+++|+.|+..+++.+.+. +.++|++||......... ..+.|.
T Consensus 68 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~---~~~iv~~SS~~v~~~~~~----------~~~~E~------ 128 (292)
T 1vl0_A 68 INCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV---GAEIVQISTDYVFDGEAK----------EPITEF------ 128 (292)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCSCCS----------SCBCTT------
T ss_pred EECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEechHHeECCCCC----------CCCCCC------
Confidence 578887643 2568899999999999999998763 349999999765321100 000000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHH
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQK 117 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~ 117 (153)
. ...+...|+.+|.+.+.+++.++.
T Consensus 129 -------------~--~~~~~~~Y~~sK~~~E~~~~~~~~ 153 (292)
T 1vl0_A 129 -------------D--EVNPQSAYGKTKLEGENFVKALNP 153 (292)
T ss_dssp -------------S--CCCCCSHHHHHHHHHHHHHHHHCS
T ss_pred -------------C--CCCCccHHHHHHHHHHHHHHhhCC
Confidence 0 011246899999999999887643
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00067 Score=58.52 Aligned_cols=106 Identities=10% Similarity=-0.070 Sum_probs=67.4
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... +..+..+++|+.|+..+++.+... ..++||++||....+.....+. .....
T Consensus 89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~~iV~~SS~~vyg~~~~~~~------~~~~~-------- 152 (699)
T 1z45_A 89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY--NVSKFVFSSSATVYGDATRFPN------MIPIP-------- 152 (699)
T ss_dssp EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCCGGGSTT------CCSBC--------
T ss_pred EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECcHHHhCCCccccc------cCCcc--------
Confidence 5788876432 345678999999999988765432 2369999999764321100000 00000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVAT 140 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T 140 (153)
... ...+...|+.+|.+++.+++.++.+. .. |+.+..+.|+.+--
T Consensus 153 -----------E~~--~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~----g~~~~ilR~~~vyG 197 (699)
T 1z45_A 153 -----------EEC--PLGPTNPYGHTKYAIENILNDLYNSD-KK----SWKFAILRYFNPIG 197 (699)
T ss_dssp -----------TTS--CCCCCSHHHHHHHHHHHHHHHHHHHS-TT----SCEEEEEEECEEEC
T ss_pred -----------ccC--CCCCCChHHHHHHHHHHHHHHHHHhc-cC----CCcEEEEEeccccC
Confidence 000 01124689999999999999988775 23 78999998876643
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0006 Score=53.93 Aligned_cols=108 Identities=11% Similarity=-0.080 Sum_probs=67.9
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+|+..... ++.+..+++|+.++..+++.+... +.++|++||....+.... ..+.++.
T Consensus 96 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~v~~SS~~vyg~~~~----------~~~~e~~----- 157 (372)
T 3slg_A 96 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY---GKHLVFPSTSEVYGMCAD----------EQFDPDA----- 157 (372)
T ss_dssp EECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH---TCEEEEECCGGGGBSCCC----------SSBCTTT-----
T ss_pred EEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh---CCcEEEeCcHHHhCCCCC----------CCCCccc-----
Confidence 4677776443 456788999999999998887543 279999999654322110 0000000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
.+....+...+...|+.+|.+.+.+++.++.+ |+.++.|.||.+..+-.
T Consensus 158 ---------~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~--------g~~~~ilRp~~v~G~~~ 206 (372)
T 3slg_A 158 ---------SALTYGPINKPRWIYACSKQLMDRVIWGYGME--------GLNFTLFRPFNWIGPGL 206 (372)
T ss_dssp ---------CCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT--------TCEEEEEEECSEECSSC
T ss_pred ---------cccccCCCCCCCCcHHHHHHHHHHHHHHHHHC--------CCCEEEEccccccCCCc
Confidence 00000000012357999999999998887654 48999999999876653
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00081 Score=51.68 Aligned_cols=103 Identities=18% Similarity=-0.020 Sum_probs=67.4
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... +..+..++ |+.++..+++.+...- -.++|++||....+.... ....|
T Consensus 74 i~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~--v~~~v~~SS~~v~~~~~~----------~~~~E------- 133 (321)
T 3vps_A 74 YHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG--VPKVVVGSTCEVYGQADT----------LPTPE------- 133 (321)
T ss_dssp EECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSCSS----------SSBCT-------
T ss_pred EECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC--CCeEEEecCHHHhCCCCC----------CCCCC-------
Confidence 4677766432 33456677 9999998888875431 268999999765321100 00000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCe-EEEEeeCCcccCCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDK-VINAVHPGYVATNMSS 144 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi-~v~~v~PG~v~T~~~~ 144 (153)
.....+...|+.+|.+.+.+++.++.+. |+ .++.+.||.+..+...
T Consensus 134 --------------~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~ilRp~~v~G~~~~ 180 (321)
T 3vps_A 134 --------------DSPLSPRSPYAASKVGLEMVAGAHQRAS-------VAPEVGIVRFFNVYGPGER 180 (321)
T ss_dssp --------------TSCCCCCSHHHHHHHHHHHHHHHHHHSS-------SSCEEEEEEECEEECTTCC
T ss_pred --------------CCCCCCCChhHHHHHHHHHHHHHHHHHc-------CCCceEEEEeccccCcCCC
Confidence 0011234789999999999999888763 68 9999999988776543
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0013 Score=50.20 Aligned_cols=97 Identities=14% Similarity=-0.020 Sum_probs=63.7
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... ++++..+++|+.++..+++.+... +.++|++||....+.... ....|.
T Consensus 59 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~vy~~~~~----------~~~~E~------ 119 (299)
T 1n2s_A 59 VNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET---GAWVVHYSTDYVFPGTGD----------IPWQET------ 119 (299)
T ss_dssp EECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT---TCEEEEEEEGGGSCCCTT----------CCBCTT------
T ss_pred EECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc---CCcEEEEecccEEeCCCC----------CCCCCC------
Confidence 4778766432 567889999999999999987542 358999999765321100 000000
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
....+...|+.+|.+.+.+++.++ .+++.+.||.+..+.
T Consensus 120 ---------------~~~~p~~~Y~~sK~~~E~~~~~~~-----------~~~~ilRp~~v~G~~ 158 (299)
T 1n2s_A 120 ---------------DATSPLNVYGKTKLAGEKALQDNC-----------PKHLIFRTSWVYAGK 158 (299)
T ss_dssp ---------------SCCCCSSHHHHHHHHHHHHHHHHC-----------SSEEEEEECSEECSS
T ss_pred ---------------CCCCCccHHHHHHHHHHHHHHHhC-----------CCeEEEeeeeecCCC
Confidence 011224689999999998877642 256778899887664
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0014 Score=51.20 Aligned_cols=46 Identities=15% Similarity=0.043 Sum_probs=34.6
Q ss_pred CCCCCCCcc--HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCccc
Q psy16223 1 MNRASTVPF--AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGH 50 (153)
Q Consensus 1 innag~~~~--~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~ 50 (153)
||+||.... .++++ +++|+.++..+++.+.+. ..++||++||....
T Consensus 94 ih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~--~~~~iV~~SS~~~~ 141 (333)
T 2q1w_A 94 VHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKN--NVGRFVYFQTALCY 141 (333)
T ss_dssp EECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGG
T ss_pred EECceecCCCccCChH--HHHHHHHHHHHHHHHHHh--CCCEEEEECcHHHh
Confidence 578887643 24455 999999999999998763 23699999996553
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0009 Score=53.03 Aligned_cols=88 Identities=16% Similarity=0.075 Sum_probs=66.0
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
||+||.... +.++..+++|+.++..+++.+... ....++|++||.....
T Consensus 51 ih~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~----------------------------- 99 (369)
T 3st7_A 51 VHLAGVNRP-EHDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQ----------------------------- 99 (369)
T ss_dssp EECCCSBCT-TCSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGS-----------------------------
T ss_pred EECCcCCCC-CCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcC-----------------------------
Confidence 467776543 356778999999999988876431 1124899999876532
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|+.+|.+.+.+.+.++++. |+.+..+.||.+..+..
T Consensus 100 -----------------~~~Y~~sK~~~E~~~~~~~~~~-------g~~~~i~R~~~v~G~~~ 138 (369)
T 3st7_A 100 -----------------DNPYGESKLQGEQLLREYAEEY-------GNTVYIYRWPNLFGKWC 138 (369)
T ss_dssp -----------------CSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECEEECTTC
T ss_pred -----------------CCCchHHHHHHHHHHHHHHHHh-------CCCEEEEECCceeCCCC
Confidence 2689999999999999888764 68889999998876643
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0025 Score=46.54 Aligned_cols=36 Identities=6% Similarity=-0.088 Sum_probs=27.1
Q ss_pred CchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 98 DSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 98 ~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
...|+.+|.+.+.+ +.+ .... |++++.|.||++.++
T Consensus 129 ~~~y~~sK~~~e~~-~~~---~~~~----~i~~~ivrp~~v~g~ 164 (224)
T 3h2s_A 129 QPWYDGALYQYYEY-QFL---QMNA----NVNWIGISPSEAFPS 164 (224)
T ss_dssp STTHHHHHHHHHHH-HHH---TTCT----TSCEEEEEECSBCCC
T ss_pred chhhHHHHHHHHHH-HHH---HhcC----CCcEEEEcCccccCC
Confidence 36799999988854 222 2234 799999999999887
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0018 Score=49.15 Aligned_cols=96 Identities=15% Similarity=0.124 Sum_probs=62.6
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
||+||..... +.++..+++|+.++..+++.+... +.++|++||....+.... ..+.|+
T Consensus 61 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~v~~SS~~vy~~~~~----------~~~~E~------ 121 (287)
T 3sc6_A 61 IHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV---GAKLVYISTDYVFQGDRP----------EGYDEF------ 121 (287)
T ss_dssp EECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCCCCS----------SCBCTT------
T ss_pred EECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEchhhhcCCCCC----------CCCCCC------
Confidence 4778876543 468899999999999999987543 458999999765321100 000100
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
. ...+...|+.+|.+.+.+++.++. ..+.+.||.+..+
T Consensus 122 -------------~--~~~p~~~Y~~sK~~~E~~~~~~~~-----------~~~ilR~~~v~G~ 159 (287)
T 3sc6_A 122 -------------H--NPAPINIYGASKYAGEQFVKELHN-----------KYFIVRTSWLYGK 159 (287)
T ss_dssp -------------S--CCCCCSHHHHHHHHHHHHHHHHCS-----------SEEEEEECSEECS
T ss_pred -------------C--CCCCCCHHHHHHHHHHHHHHHhCC-----------CcEEEeeeeecCC
Confidence 0 112247899999999988876533 2356778777554
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0022 Score=46.59 Aligned_cols=37 Identities=8% Similarity=0.101 Sum_probs=27.4
Q ss_pred CchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 98 DSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 98 ~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
...|+.+|.+.+.+ ..+.. ... |++++.|.||++.++
T Consensus 125 ~~~y~~~k~~~e~~-~~~~~--~~~----gi~~~ivrp~~v~g~ 161 (221)
T 3ew7_A 125 APYYPTARAQAKQL-EHLKS--HQA----EFSWTYISPSAMFEP 161 (221)
T ss_dssp CCCSCCHHHHHHHH-HHHHT--TTT----TSCEEEEECSSCCCC
T ss_pred HHHHHHHHHHHHHH-HHHHh--hcc----CccEEEEeCcceecC
Confidence 35699999998876 22222 133 799999999999876
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0034 Score=46.67 Aligned_cols=24 Identities=8% Similarity=0.009 Sum_probs=18.6
Q ss_pred HHHHHHhhhhcCC--ccEEEecCCcc
Q psy16223 26 RTCVFLFPLLRRH--ARVVNLSSSAG 49 (153)
Q Consensus 26 ~l~~~~lp~l~~~--g~iv~~sS~~~ 49 (153)
..++.+++.|++. ++||++||...
T Consensus 103 ~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 103 IQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCEEEEEeccee
Confidence 4567888888653 69999999876
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=96.02 E-value=0.02 Score=43.20 Aligned_cols=67 Identities=4% Similarity=-0.122 Sum_probs=48.2
Q ss_pred hhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCccccCCCC
Q psy16223 18 LTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWP 97 (153)
Q Consensus 18 ~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (153)
++|+.++..+++.+... .-.++|++||......
T Consensus 81 ~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~~--------------------------------------------- 113 (287)
T 2jl1_A 81 TLLIVQHANVVKAARDA--GVKHIAYTGYAFAEES--------------------------------------------- 113 (287)
T ss_dssp HHHHHHHHHHHHHHHHT--TCSEEEEEEETTGGGC---------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHc--CCCEEEEECCCCCCCC---------------------------------------------
Confidence 56888888877776431 1258999998764311
Q ss_pred CchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 98 DSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 98 ~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|+.+|.+.+.+.+. . |+.++.+.||++.++.
T Consensus 114 ~~~y~~~K~~~E~~~~~-------~----~~~~~ilrp~~~~~~~ 147 (287)
T 2jl1_A 114 IIPLAHVHLATEYAIRT-------T----NIPYTFLRNALYTDFF 147 (287)
T ss_dssp CSTHHHHHHHHHHHHHH-------T----TCCEEEEEECCBHHHH
T ss_pred CCchHHHHHHHHHHHHH-------c----CCCeEEEECCEecccc
Confidence 24799999999887752 3 7999999999876543
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=95.09 E-value=0.014 Score=44.34 Aligned_cols=86 Identities=13% Similarity=-0.043 Sum_probs=49.0
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
..++..+++|+.++..+++.+.. ..-.++|++||....+.... ..+.| .
T Consensus 76 ~~~~~~~~~n~~~~~~ll~a~~~--~~~~~~v~~SS~~vyg~~~~----------~~~~E-------------------~ 124 (286)
T 3gpi_A 76 YSDEHYRLSYVEGLRNTLSALEG--APLQHVFFVSSTGVYGQEVE----------EWLDE-------------------D 124 (286)
T ss_dssp HC-----CCSHHHHHHHHHHTTT--SCCCEEEEEEEGGGCCCCCS----------SEECT-------------------T
T ss_pred CCHHHHHHHHHHHHHHHHHHHhh--CCCCEEEEEcccEEEcCCCC----------CCCCC-------------------C
Confidence 45678889999999988887652 12268999999765322110 00000 0
Q ss_pred cccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 91 HVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 91 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
. ...+...|+.+|.+.+.+ +.. +.++.+.||.+..+.
T Consensus 125 ~--~~~p~~~Y~~sK~~~E~~-~~~------------~~~~ilR~~~v~G~~ 161 (286)
T 3gpi_A 125 T--PPIAKDFSGKRMLEAEAL-LAA------------YSSTILRFSGIYGPG 161 (286)
T ss_dssp S--CCCCCSHHHHHHHHHHHH-GGG------------SSEEEEEECEEEBTT
T ss_pred C--CCCCCChhhHHHHHHHHH-Hhc------------CCeEEEecccccCCC
Confidence 0 111247899999998876 432 356677888776543
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=94.77 E-value=0.067 Score=40.17 Aligned_cols=32 Identities=16% Similarity=0.147 Sum_probs=26.1
Q ss_pred chhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 99 ~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
..|+.+|.+.+.+.+. . |+.++.|.||++.++
T Consensus 112 ~~y~~sK~~~e~~~~~-------~----~~~~~ilrp~~~~~~ 143 (286)
T 2zcu_A 112 LGLADEHIETEKMLAD-------S----GIVYTLLRNGWYSEN 143 (286)
T ss_dssp STTHHHHHHHHHHHHH-------H----CSEEEEEEECCBHHH
T ss_pred chhHHHHHHHHHHHHH-------c----CCCeEEEeChHHhhh
Confidence 4799999999887753 4 799999999987654
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=94.59 E-value=0.11 Score=43.26 Aligned_cols=101 Identities=10% Similarity=-0.068 Sum_probs=60.8
Q ss_pred CCCCCCCc----cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccc-cccccHHHHhhhhccccChHHHHH
Q psy16223 1 MNRASTVP----FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHL-SQITNLELKKRLMEDCVSERQLTD 75 (153)
Q Consensus 1 innag~~~----~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 75 (153)
||+||... ..+..+.++++|+.|+..+++.+... ....++|++||....+ .... ..+.+.
T Consensus 206 ih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~-~~~~r~V~~SS~~vyg~~~~~----------~~~~E~---- 270 (516)
T 3oh8_A 206 VHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAES-TQCTTMISASAVGFYGHDRGD----------EILTEE---- 270 (516)
T ss_dssp EECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHC-SSCCEEEEEEEGGGGCSEEEE----------EEECTT----
T ss_pred EECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeCcceEecCCCCC----------CccCCC----
Confidence 46777642 23567889999999999999974321 1235899999966433 1100 000000
Q ss_pred HHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 76 MMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...+...|+.+|...+.+.+. .... |+.++.|.||.+..+-
T Consensus 271 ------------------~~~~~~~y~~~~~~~E~~~~~----~~~~----gi~~~ilRp~~v~Gp~ 311 (516)
T 3oh8_A 271 ------------------SESGDDFLAEVCRDWEHATAP----ASDA----GKRVAFIRTGVALSGR 311 (516)
T ss_dssp ------------------SCCCSSHHHHHHHHHHHTTHH----HHHT----TCEEEEEEECEEEBTT
T ss_pred ------------------CCCCcChHHHHHHHHHHHHHH----HHhC----CCCEEEEEeeEEECCC
Confidence 011235688777766544332 2334 7999999999987753
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=92.72 E-value=0.34 Score=36.64 Aligned_cols=35 Identities=20% Similarity=-0.041 Sum_probs=28.6
Q ss_pred chhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 99 ~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
..|..+|.+++.+.+. . |++++.|.||++.+++..
T Consensus 128 ~~y~~sK~~~e~~~~~-------~----gi~~~ilrp~~~~~~~~~ 162 (299)
T 2wm3_A 128 AAHFDGKGEVEEYFRD-------I----GVPMTSVRLPCYFENLLS 162 (299)
T ss_dssp CHHHHHHHHHHHHHHH-------H----TCCEEEEECCEEGGGGGT
T ss_pred CchhhHHHHHHHHHHH-------C----CCCEEEEeecHHhhhchh
Confidence 5799999999887653 3 799999999998887543
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=92.43 E-value=0.33 Score=36.37 Aligned_cols=35 Identities=3% Similarity=-0.137 Sum_probs=29.1
Q ss_pred CchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 98 DSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 98 ~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
...|+.+|.+.+.+.+.+ . |+.++.+.||.+..+.
T Consensus 124 ~~~Y~~sK~~~E~~~~~~------~----~~~~~ilRp~~v~G~~ 158 (286)
T 3ius_A 124 TAARGRWRVMAEQQWQAV------P----NLPLHVFRLAGIYGPG 158 (286)
T ss_dssp CSHHHHHHHHHHHHHHHS------T----TCCEEEEEECEEEBTT
T ss_pred CCHHHHHHHHHHHHHHhh------c----CCCEEEEeccceECCC
Confidence 368999999999887765 4 7999999999887664
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=89.31 E-value=0.4 Score=37.68 Aligned_cols=34 Identities=18% Similarity=0.065 Sum_probs=26.5
Q ss_pred chhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 99 ~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
..|..+|.+.+.+++. . |++++.|.||++-+...
T Consensus 125 ~~y~~sK~~~E~~~~~-------~----gi~~~ivrpg~~g~~~~ 158 (352)
T 1xgk_A 125 VPMWAPKFTVENYVRQ-------L----GLPSTFVYAGIYNNNFT 158 (352)
T ss_dssp CTTTHHHHHHHHHHHT-------S----SSCEEEEEECEEGGGCB
T ss_pred ccHHHHHHHHHHHHHH-------c----CCCEEEEecceecCCch
Confidence 5789999999988764 2 58899999998765543
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=87.98 E-value=1.4 Score=33.01 Aligned_cols=16 Identities=6% Similarity=-0.108 Sum_probs=13.9
Q ss_pred CeEEEEeeCCcccCCC
Q psy16223 127 DKVINAVHPGYVATNM 142 (153)
Q Consensus 127 gi~v~~v~PG~v~T~~ 142 (153)
|+.++.|.||++.+++
T Consensus 132 g~~~~ilrp~~~~~~~ 147 (289)
T 3e48_A 132 GIDYTYVRMAMYMDPL 147 (289)
T ss_dssp CCEEEEEEECEESTTH
T ss_pred CCCEEEEecccccccc
Confidence 8999999999987764
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=87.55 E-value=1.1 Score=34.53 Aligned_cols=46 Identities=4% Similarity=-0.096 Sum_probs=32.4
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEE-------EecCCc
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVV-------NLSSSA 48 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv-------~~sS~~ 48 (153)
||+||... ++++..+++|+.++..+++.+.+....-.++| ++||..
T Consensus 77 ih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~ 129 (364)
T 2v6g_A 77 FYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFE 129 (364)
T ss_dssp EECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGG
T ss_pred EECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechh
Confidence 46777653 34678999999999999999877532224565 677654
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=87.28 E-value=0.22 Score=38.94 Aligned_cols=48 Identities=8% Similarity=0.054 Sum_probs=32.3
Q ss_pred CCCCCCCcc-HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCc
Q psy16223 1 MNRASTVPF-AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSA 48 (153)
Q Consensus 1 innag~~~~-~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~ 48 (153)
||.||.... .+..+..+++|..++..+.+.+..+=.++++++++|+..
T Consensus 85 ih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 85 LLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred EECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 355665421 234567899999999999988766422456888877654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 153 | ||||
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 2e-19 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 1e-05 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 2e-05 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 2e-05 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 2e-05 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 7e-05 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 7e-05 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 1e-04 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 1e-04 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 2e-04 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 2e-04 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 3e-04 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 5e-04 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 6e-04 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 9e-04 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 0.001 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 0.001 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 0.001 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 0.002 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 0.002 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 0.002 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 0.002 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 0.002 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 0.002 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 0.004 |
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.9 bits (196), Expect = 2e-19
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Query: 12 QAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITN-LELKKRLMEDCVSE 70
QAE T+ TN+ G C L PL++ RVVN+SS + + EL+++ + ++E
Sbjct: 104 QAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE 163
Query: 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVI 130
+L +M +F++ TK+ H +GWP SAY V+KIGV +L+RI+ +K + ++
Sbjct: 164 EELVGLMNKFVEDTKKG--VHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILL 221
Query: 131 NAVHPGYVATNMSSFMG 147
NA PG+V T+M+
Sbjct: 222 NACCPGWVRTDMAGPKA 238
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 41.5 bits (97), Expect = 1e-05
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 76 MMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVH 134
+ +I A PD Y+++K ++ TR +L +N++
Sbjct: 135 LSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAI----DLIQHGIRVNSIS 190
Query: 135 PGYVATNMSSFMG 147
PG VAT S MG
Sbjct: 191 PGLVATGFGSAMG 203
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 41.0 bits (95), Expect = 2e-05
Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 26/134 (19%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73
+ + N +V L PLL+ A + + +
Sbjct: 107 AEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAA-------------------- 146
Query: 74 TDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAV 133
++ + + +P AY +SK +N+ R +L + + ++
Sbjct: 147 --VITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAV----DLKDDNVLVVNF 200
Query: 134 HPGYVATNMSSFMG 147
PG+V TN+
Sbjct: 201 CPGWVQTNLGGKNA 214
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (95), Expect = 2e-05
Identities = 23/135 (17%), Positives = 32/135 (23%), Gaps = 53/135 (39%)
Query: 14 EKTILTNYLGLVRTCVFLFPLL--RRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71
EKT N L T P + H +V ++S+AGH+
Sbjct: 109 EKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV-------------------- 148
Query: 72 QLTDMMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKV- 129
P AY SK + EL
Sbjct: 149 -----------------------SVPFLLAYCSSKFAAVGFHKTLTD----ELAALQITG 181
Query: 130 --INAVHPGYVATNM 142
+ P +V T
Sbjct: 182 VKTTCLCPNFVNTGF 196
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (95), Expect = 2e-05
Identities = 20/141 (14%), Positives = 37/141 (26%), Gaps = 50/141 (35%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRRH----ARVVNLSSSAGHLSQITNLELKKRLMEDCVS 69
+ N L L + ++ ++N++S +GH
Sbjct: 114 KDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH------------------- 154
Query: 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKV 129
V Y+ +K V LT ++ EL
Sbjct: 155 ---------------------RVLPLSVTHFYSATKYAVTALTEGLRQ----ELREAQTH 189
Query: 130 I--NAVHPGYVATNMSSFMGN 148
I + PG V T + + +
Sbjct: 190 IRATCISPGVVETQFAFKLHD 210
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (91), Expect = 7e-05
Identities = 20/130 (15%), Positives = 34/130 (26%), Gaps = 47/130 (36%)
Query: 14 EKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQ 72
+ + N LG P LR+ V+N+SS G + Q
Sbjct: 105 RQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ------------------- 145
Query: 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINA 132
Y +K V +T+ + +N
Sbjct: 146 -----------------------AQAVPYVATKGAVTAMTKALAL----DESPYGVRVNC 178
Query: 133 VHPGYVATNM 142
+ PG + T +
Sbjct: 179 ISPGNIWTPL 188
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 38.9 bits (90), Expect = 7e-05
Identities = 9/50 (18%), Positives = 14/50 (28%), Gaps = 5/50 (10%)
Query: 94 KGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
Y+ SK V T K +++PG T +
Sbjct: 143 NAIHQVPVYSASKAAVVSFTNSLAKL----APITGVTAYSINPGITRTPL 188
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 38.7 bits (90), Expect = 1e-04
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
+AY SK G+ LTR +L +NAV PG +AT
Sbjct: 146 AAYNASKGGLVNLTRSLAL----DLAPLRIRVNAVAPGAIATEA 185
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (88), Expect = 1e-04
Identities = 8/46 (17%), Positives = 15/46 (32%), Gaps = 6/46 (13%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVI--NAVHPGYVATNM 142
+AY+ SK ++ +K E + G + T
Sbjct: 161 AAYSASKFALDGFFSSIRK----EYSVSRVNVSITLCVLGLIDTET 202
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 37.7 bits (87), Expect = 2e-04
Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Query: 76 MMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVH 134
++ +I + YA +K ++ TR +L +N+V
Sbjct: 132 LIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAI----DLIQHGVRVNSVS 187
Query: 135 PGYVATNMSSFMG 147
PG VAT MG
Sbjct: 188 PGAVATGFMGAMG 200
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 37.7 bits (87), Expect = 2e-04
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 94 KGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
G P AY SK V ++++ DC L + D +N VHPGY+ T +
Sbjct: 147 VGDPSLGAYNASKGAVRIMSKSAAL--DCALKDYDVRVNTVHPGYIKTPL 194
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.3 bits (86), Expect = 3e-04
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
Y SK G+ TR L N +NA+ PG+V T +
Sbjct: 147 PVYCASKHGIVGFTRSAA--LAANLMNSGVRLNAICPGFVNTAI 188
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 36.5 bits (84), Expect = 5e-04
Identities = 12/135 (8%), Positives = 34/135 (25%), Gaps = 48/135 (35%)
Query: 14 EKTILTNYLGLVRTCVFLFPLL--RRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71
+ + G + + + + + R++ +S++G
Sbjct: 115 DIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN------------------ 156
Query: 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVIN 131
+ + Y+ +K+G+ L E + N
Sbjct: 157 ------------------------FGQANYSAAKLGLLGLANTLVI----EGRKNNIHCN 188
Query: 132 AVHPGYVATNMSSFM 146
+ P + + M
Sbjct: 189 TIAPNAGSRMTETVM 203
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 36.5 bits (84), Expect = 6e-04
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 94 KGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146
G + Y+ SK GV T+ K EL +++ +NA+ PG+++++M+ +
Sbjct: 151 TGNVGQANYSSSKAGVIGFTKSLAK----ELASRNITVNAIAPGFISSDMTDKI 200
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 35.8 bits (82), Expect = 9e-04
Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 9/103 (8%)
Query: 49 GHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAK-----GWPDSAYAV 103
++ + + L + + E M A + YA
Sbjct: 91 NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAA 150
Query: 104 SKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146
S GV LTR ELG +N + PG++ T M++ +
Sbjct: 151 SMAGVVGLTRTLAL----ELGRWGIRVNTLAPGFIETRMTAKV 189
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.6 bits (81), Expect = 0.001
Identities = 8/44 (18%), Positives = 12/44 (27%), Gaps = 4/44 (9%)
Query: 99 SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
Y SK + L L ++ + G V T
Sbjct: 153 DVYCASKFALEGLCESLA----VLLLPFGVHLSLIECGPVHTAF 192
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 35.4 bits (81), Expect = 0.001
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 80 FMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVA 139
I +A Y +K V LT+ ELG +N++HPG V
Sbjct: 131 RGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTAL----ELGPSGIRVNSIHPGLVK 186
Query: 140 TNMSSFM 146
T M+ ++
Sbjct: 187 TPMTDWV 193
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 35.4 bits (81), Expect = 0.001
Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Query: 76 MMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHP 135
+I A V S Y+ +K +N L R E + NAV P
Sbjct: 133 KASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLAC----EWASDGIRANAVAP 188
Query: 136 GYVATNM 142
+AT +
Sbjct: 189 AVIATPL 195
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 35.4 bits (81), Expect = 0.002
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Query: 95 GWPDSAY-AVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
P A +K ++ LTR E + +N V PG +AT++
Sbjct: 151 AVPYEAVYGATKGAMDQLTRCLAF----EWAKDNIRVNGVGPGVIATSL 195
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 35.3 bits (81), Expect = 0.002
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 87 HPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146
A + S+Y SK GV L+++ ELG +N+VHPG T M++
Sbjct: 137 SSAAGLMGLALTSSYGASKWGVRGLSKLAAV----ELGTDRIRVNSVHPGMTYTPMTAET 192
Query: 147 G 147
G
Sbjct: 193 G 193
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 35.2 bits (80), Expect = 0.002
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Query: 94 KGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142
KG P+ +AY SK + LT +L + +NA+ PGY+
Sbjct: 147 KGPPNMAAYGTSKGAIIALTETAAL----DLAPYNIRVNAISPGYMGPGF 192
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 35.1 bits (80), Expect = 0.002
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 63 LMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCE 122
L + R+ +++ E + A + + + YA K+GV L R E
Sbjct: 111 LTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLAL----E 165
Query: 123 LGNQDKVINAVHPGYVATNMSSFM 146
L + +N + PG + T M++ +
Sbjct: 166 LARKGVRVNVLLPGLIQTPMTAGL 189
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 34.7 bits (79), Expect = 0.002
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Query: 76 MMYEFMDITKEHPRAHVAKGWPDSAY-AVSKIGVNLLTRIYQKKFDCELGNQDKVINAVH 134
I A V G P+ A A SK V R + + G + +N +
Sbjct: 129 HCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAV----DCGAKGVTVNCIA 184
Query: 135 PGYVATNM 142
PG V T+M
Sbjct: 185 PGGVKTDM 192
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 34.6 bits (79), Expect = 0.002
Identities = 13/71 (18%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 76 MMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHP 135
+ I S Y ++ G L K ELG + + A+ P
Sbjct: 119 KKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSK----ELGEYNIPVFAIGP 174
Query: 136 GYVATNMSSFM 146
Y+ + S +
Sbjct: 175 NYLHSEDSPYF 185
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 33.9 bits (77), Expect = 0.004
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Query: 76 MMYEFMDITKEHPRAHVAKGWPD-SAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVH 134
M+ +G + Y+ SK GV T+ EL +NAV
Sbjct: 127 MLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGL----ELARTGITVNAVC 182
Query: 135 PGYVATNM 142
PG+V T M
Sbjct: 183 PGFVETPM 190
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 153 | |||
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.91 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.88 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.87 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.87 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.86 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.86 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.86 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.86 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.86 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.86 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.85 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.85 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.85 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.85 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.85 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.85 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.84 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.84 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.84 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.84 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.84 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.84 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.83 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.83 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.83 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.83 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.83 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.83 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.83 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.83 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.83 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.83 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.82 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.82 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.82 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.82 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.82 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.82 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.81 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.81 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.81 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.81 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.8 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.8 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.8 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.8 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.79 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.79 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.79 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.78 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.78 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.77 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.76 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.76 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.76 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.71 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.69 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.68 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.63 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.63 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.54 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.5 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.47 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.46 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.41 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.17 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 97.12 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 96.94 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 96.65 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 96.62 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 96.37 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 96.35 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 96.25 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 96.25 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 96.22 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 95.84 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 94.8 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 94.2 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 93.61 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 93.05 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 92.06 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 91.63 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 91.55 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 90.5 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 90.22 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 88.55 |
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=2.1e-24 Score=167.04 Aligned_cols=150 Identities=34% Similarity=0.542 Sum_probs=117.2
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||||+... .++|++++++|++|++.+++.++|.|++.|+||++||..+ ...+...+.....+......+..
T Consensus 86 VnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~ 165 (275)
T d1wmaa1 86 VNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEE 165 (275)
T ss_dssp EECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHH
T ss_pred EEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccchhh
Confidence 699998632 3689999999999999999999999999999999999988 55555555555555556566555
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCCCCCCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMGNVNIF 152 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~ 152 (153)
.......+...... ......+++..+|++||+++.+|++.++++|..+....||+||+||||+|+|+|.+.....+||
T Consensus 166 ~~~~~~~~~~~~~~--~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~~~~pe 243 (275)
T d1wmaa1 166 LVGLMNKFVEDTKK--GVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPE 243 (275)
T ss_dssp HHHHHHHHHHHHHT--TCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTCSBCHH
T ss_pred hccccccchhcccc--cccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcccCCHH
Confidence 55555555554444 4455566767889999999999999999998764333379999999999999999887776665
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.88 E-value=6.4e-23 Score=156.34 Aligned_cols=101 Identities=26% Similarity=0.249 Sum_probs=88.8
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|+++++|.++|+|++ +|+||++||..+ .+.+.
T Consensus 90 vnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~---------------- 153 (240)
T d2bd0a1 90 VNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH---------------- 153 (240)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred ecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCC----------------
Confidence 589998632 3889999999999999999999999964 689999999988 54433
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMGN 148 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~~ 148 (153)
...|++||+|+.+|+|+|+.|+.++ ||+||+|+||+|+|+|......
T Consensus 154 ---------------------------~~~Y~asK~al~~lt~~la~el~~~----gIrvn~i~PG~v~T~~~~~~~~ 200 (240)
T d2bd0a1 154 ---------------------------SSIYCMSKFGQRGLVETMRLYARKC----NVRITDVQPGAVYTPMWGKVDD 200 (240)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCBCSTTTCCCCS
T ss_pred ---------------------------ChHHHHHHHHHHHHHHHHHHHhCcC----CeEEEEeeeCcccCchhhhcCH
Confidence 4789999999999999999999998 9999999999999999877643
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.87 E-value=5.5e-23 Score=157.22 Aligned_cols=100 Identities=22% Similarity=0.217 Sum_probs=81.1
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||+... .++|++++++|+.|+++++|.++|.|++ +|+||++||..+ ...+.
T Consensus 85 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~---------------- 148 (247)
T d2ew8a1 85 VNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA---------------- 148 (247)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS----------------
T ss_pred EECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcc----------------
Confidence 689998633 2789999999999999999999999964 599999999988 44332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||+|+..|+|+|+.|+.++ ||+||+|+||+|+|+|.....
T Consensus 149 ---------------------------~~~Y~asKaal~~ltk~lA~ela~~----gIrVN~I~PG~i~T~~~~~~~ 194 (247)
T d2ew8a1 149 ---------------------------YTHYISTKAANIGFTRALASDLGKD----GITVNAIAPSLVRTATTEASA 194 (247)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCC---------
T ss_pred ---------------------------cccchhhhccHHHHHHHHHHHhccc----CeEEEEEeeCCCCCccccccc
Confidence 4789999999999999999999999 999999999999999986543
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.87 E-value=6e-23 Score=156.83 Aligned_cols=99 Identities=22% Similarity=0.299 Sum_probs=87.3
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhc--CCccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLR--RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~--~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|+++++|.++|+|+ ++|+||++||..+ .+.+.
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~---------------- 147 (244)
T d1edoa_ 84 VNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG---------------- 147 (244)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----------------
T ss_pred ccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCC----------------
Confidence 689987532 388999999999999999999999995 4699999999988 54432
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+.+|+|+|+.|+.++ |||||+|+||+|+|+|....
T Consensus 148 ---------------------------~~~Y~asKaal~~ltk~lA~el~~~----gIrvN~I~PG~i~T~~~~~~ 192 (244)
T d1edoa_ 148 ---------------------------QANYAAAKAGVIGFSKTAAREGASR----NINVNVVCPGFIASDMTAKL 192 (244)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECSBCSHHHHTT
T ss_pred ---------------------------CHHHHHHHHHHHHChHHHHHHHhhh----CcEEEEEecceeccHHHHHh
Confidence 4789999999999999999999998 99999999999999987654
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.86 E-value=1.7e-22 Score=155.31 Aligned_cols=99 Identities=22% Similarity=0.302 Sum_probs=82.8
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|+++++|.++|+|++ .|+||++||..+ ...+.
T Consensus 88 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~---------------- 151 (260)
T d1x1ta1 88 VNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN---------------- 151 (260)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred EeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCC----------------
Confidence 689997522 2789999999999999999999999965 589999999988 44332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|++.|+|+|+.|+.++ ||+||+|+||+|+|+|....
T Consensus 152 ---------------------------~~~Y~asKaal~~lt~~lA~el~~~----gIrVN~I~PG~i~T~~~~~~ 196 (260)
T d1x1ta1 152 ---------------------------KSAYVAAKHGVVGFTKVTALETAGQ----GITANAICPGWVRTPLVEKQ 196 (260)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCBCC------
T ss_pred ---------------------------cchhhhhhhhHHHhHHHHHHHhchh----CcEEEEEecCCCCChhhhhh
Confidence 4789999999999999999999998 99999999999999998654
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.86 E-value=3.2e-22 Score=152.91 Aligned_cols=100 Identities=20% Similarity=0.299 Sum_probs=88.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|+++++|.++|.|++ .|+||++||..+ ...+.
T Consensus 85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~---------------- 148 (244)
T d1nffa_ 85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA---------------- 148 (244)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccccc----------------
Confidence 589998633 3889999999999999999999999964 589999999988 44332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|+++|+++.+|+|+++.|+.++ ||+||+|+||+|+|+|.....
T Consensus 149 ---------------------------~~~Y~asKaal~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~~~~ 194 (244)
T d1nffa_ 149 ---------------------------CHGYTATKFAVRGLTKSTALELGPS----GIRVNSIHPGLVKTPMTDWVP 194 (244)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCSGGGTTSC
T ss_pred ---------------------------ccchhhHHHHHHHHHHHHHHHhccc----CEEEEEEeeCCccChhHhhhh
Confidence 4789999999999999999999999 999999999999999987654
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.86 E-value=3.2e-22 Score=153.93 Aligned_cols=100 Identities=24% Similarity=0.273 Sum_probs=75.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|+++++|.++|.|++ +|+||++||..+ ...+.
T Consensus 91 vnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~---------------- 154 (259)
T d1xq1a_ 91 INNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV---------------- 154 (259)
T ss_dssp EEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------------
T ss_pred cccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccc----------------
Confidence 589987532 3889999999999999999999999964 589999999888 44332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|+++|+|+..|+|+|+.|+.++ |||||+|+||+|+|+|.....
T Consensus 155 ---------------------------~~~Y~asKaal~~lt~~lA~e~~~~----gIrVN~V~PG~i~T~~~~~~~ 200 (259)
T d1xq1a_ 155 ---------------------------GSIYSATKGALNQLARNLACEWASD----GIRANAVAPAVIATPLAEAVY 200 (259)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEECCSCC--------
T ss_pred ---------------------------cccccccccchhhhhHHHHHHhccc----CeEEEEeccCcccCHHhhhhc
Confidence 4789999999999999999999999 999999999999999987653
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.86 E-value=3.9e-22 Score=152.67 Aligned_cols=99 Identities=11% Similarity=0.145 Sum_probs=86.4
Q ss_pred CCCCCCCcc--------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF--------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~--------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.++++++|.++|+|++ +|+||++||..+ ...+.
T Consensus 76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~--------------- 140 (252)
T d1zmta1 76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE--------------- 140 (252)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT---------------
T ss_pred EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccccc---------------
Confidence 588986421 2789999999999999999999999954 699999999988 44332
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+..|+|+|+.|+.++ |||||+|+||+|+|+|....
T Consensus 141 ----------------------------~~~Y~asKaal~~lt~~lA~ela~~----gIrVN~I~PG~i~T~~~~~~ 185 (252)
T d1zmta1 141 ----------------------------LSTYTSARAGACTLANALSKELGEY----NIPVFAIGPNYLHSEDSPYF 185 (252)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCCEEEEEESSBCCBTCCSS
T ss_pred ----------------------------ccccccccccHHHHHHHHHHHhccc----CcEEEEEecCCCcCcchhhh
Confidence 4689999999999999999999999 99999999999999998765
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.86 E-value=3.3e-22 Score=153.09 Aligned_cols=97 Identities=25% Similarity=0.253 Sum_probs=85.7
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|+++++|+++|+|++ +|+||+++|..+ ...+.
T Consensus 81 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~---------------- 144 (248)
T d2d1ya1 81 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE---------------- 144 (248)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT----------------
T ss_pred EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccc----------------
Confidence 689997532 2789999999999999999999999965 589999999988 54432
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+|+..|+|+|+.|+.++ ||+||+|+||+|+|+|..
T Consensus 145 ---------------------------~~~Y~asKaal~~ltk~lA~el~~~----gIrVN~I~PG~v~T~~~~ 187 (248)
T d2d1ya1 145 ---------------------------NAAYNASKGGLVNLTRSLALDLAPL----RIRVNAVAPGAIATEAVL 187 (248)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHH
T ss_pred ---------------------------cchhHHHHHHHHHHHHHHHHHhhhh----CcEEEEEeeCCCCCchHH
Confidence 4789999999999999999999999 999999999999998754
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.86 E-value=3.6e-22 Score=152.93 Aligned_cols=99 Identities=23% Similarity=0.295 Sum_probs=83.1
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|+++++|.++|.|++ +|+||++||..+ ...+.
T Consensus 92 vnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~---------------- 155 (251)
T d2c07a1 92 VNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG---------------- 155 (251)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----------------
T ss_pred eeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCC----------------
Confidence 588887532 2789999999999999999999999954 699999999988 54332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+.+|+|+|+.||.++ |||||+|+||+|+|+|....
T Consensus 156 ---------------------------~~~Y~asKaal~~ltr~lA~el~~~----gIrVN~V~PG~v~T~~~~~~ 200 (251)
T d2c07a1 156 ---------------------------QANYSSSKAGVIGFTKSLAKELASR----NITVNAIAPGFISSDMTDKI 200 (251)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCC-----C
T ss_pred ---------------------------CHHHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEccCCEeccccccc
Confidence 4789999999999999999999999 99999999999999998765
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=1.5e-22 Score=154.43 Aligned_cols=99 Identities=20% Similarity=0.322 Sum_probs=86.9
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|++.++|.++|+|++ +|+||++||..+ .+.+.
T Consensus 83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~---------------- 146 (243)
T d1q7ba_ 83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGG---------------- 146 (243)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----------------
T ss_pred hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCC----------------
Confidence 589987532 2789999999999999999999999954 699999999888 54332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
..+|++||+|+.+|+|+|+.|+.++ ||+||+|+||+|+|+|.+..
T Consensus 147 ---------------------------~~~Y~asKaal~~lt~~lA~ela~~----gIrVN~I~PG~i~T~~~~~~ 191 (243)
T d1q7ba_ 147 ---------------------------QANYAAAKAGLIGFSKSLAREVASR----GITVNVVAPGFIETDMTRAL 191 (243)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHTS
T ss_pred ---------------------------CHHHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEecceEechhhhhh
Confidence 4789999999999999999999999 99999999999999987654
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=7.2e-23 Score=157.01 Aligned_cols=98 Identities=23% Similarity=0.257 Sum_probs=85.5
Q ss_pred CCCCCCCcc--------HHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF--------AIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~--------~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|++.++|.++|+|++ +|+||++||..+ ...+.
T Consensus 84 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~---------------- 147 (250)
T d1ydea1 84 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ---------------- 147 (250)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT----------------
T ss_pred EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccC----------------
Confidence 589986421 2779999999999999999999999976 589999999988 44332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+|+..|+|+|+.|+.++ |||||+|+||+|+|+|.+.
T Consensus 148 ---------------------------~~~Y~asKaal~~lt~~lA~e~a~~----gIrVN~I~PG~i~T~~~~~ 191 (250)
T d1ydea1 148 ---------------------------AVPYVATKGAVTAMTKALALDESPY----GVRVNCISPGNIWTPLWEE 191 (250)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCCHHHHH
T ss_pred ---------------------------cchhHHHHhhHHHHHHHHHHHhccc----CeEEEEEeeCCCCChhHHH
Confidence 4789999999999999999999999 9999999999999998654
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.85 E-value=3.6e-22 Score=153.62 Aligned_cols=97 Identities=29% Similarity=0.283 Sum_probs=85.0
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||+.. ..++|++++++|+.|+++++|+++|.|++ +|+||++||..+ ...+.
T Consensus 88 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~--------------- 152 (258)
T d1iy8a_ 88 FNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN--------------- 152 (258)
T ss_dssp EECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS---------------
T ss_pred EECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCC---------------
Confidence 68999642 12789999999999999999999999963 699999999988 44332
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+|+.+|+|+|+.|+.++ ||+||+|+||+|+|+|.+
T Consensus 153 ----------------------------~~~Y~asKaal~~lt~~lA~el~~~----gIrVN~i~PG~v~T~~~~ 195 (258)
T d1iy8a_ 153 ----------------------------QSGYAAAKHGVVGLTRNSAVEYGRY----GIRINAIAPGAIWTPMVE 195 (258)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSHHHH
T ss_pred ----------------------------chHHHHHHHHHHHHHHHHHHHhCcc----CceEEEEeeCcccCHHHH
Confidence 4799999999999999999999999 999999999999999853
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.85 E-value=2.3e-22 Score=154.56 Aligned_cols=100 Identities=27% Similarity=0.365 Sum_probs=87.2
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|+++++|.++|.|++ .|+||++||..+ ...+.
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~---------------- 147 (254)
T d1hdca_ 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL---------------- 147 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccc----------------
Confidence 689988632 2789999999999999999999999964 699999999988 44332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||+|+.+|+|+|+.|+.++ |||||+|+||+|+|+|.....
T Consensus 148 ---------------------------~~~Y~asKaal~~lt~~lA~e~a~~----gIrVN~I~PG~v~T~~~~~~~ 193 (254)
T d1hdca_ 148 ---------------------------TSSYGASKWGVRGLSKLAAVELGTD----RIRVNSVHPGMTYTPMTAETG 193 (254)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHHHT
T ss_pred ---------------------------hhhHHHHHHHHHHHHHHHHHHhCCC----ceEEEEeeeCcccCccchhcC
Confidence 4789999999999999999999999 999999999999999875443
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.85 E-value=5.6e-22 Score=150.86 Aligned_cols=99 Identities=25% Similarity=0.314 Sum_probs=84.7
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.+++.++|.++|.|++ +|+||++||..+ ...+.
T Consensus 78 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~---------------- 141 (237)
T d1uzma1 78 VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN---------------- 141 (237)
T ss_dssp EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----C----------------
T ss_pred EeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcc----------------
Confidence 689997532 3889999999999999999999999964 579999999988 44332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+..|+|+|+.|+.++ ||+||+|+||+|+|+|.+..
T Consensus 142 ---------------------------~~~Y~asKaal~~lt~~lA~e~~~~----gIrVN~I~PG~v~T~~~~~~ 186 (237)
T d1uzma1 142 ---------------------------QANYAASKAGVIGMARSIARELSKA----NVTANVVAPGYIDTDMTRAL 186 (237)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHHS
T ss_pred ---------------------------cHHHHHHHHHHHHHHHHHHhhhhcC----CceeeeeeeCcCCChhhhcc
Confidence 4789999999999999999999999 99999999999999987543
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=8.4e-22 Score=153.40 Aligned_cols=99 Identities=18% Similarity=0.147 Sum_probs=82.5
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|++.+++.++|+|++ +|+||++||..+ .+.+.
T Consensus 88 vnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~---------------- 151 (285)
T d1jtva_ 88 VCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF---------------- 151 (285)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT----------------
T ss_pred hhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCC----------------
Confidence 478887532 2789999999999999999999999954 599999999988 55433
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+.+|+++|+.|+.+. ||+||+|+||+|+|+|....
T Consensus 152 ---------------------------~~~Y~asKaal~~l~~~la~El~~~----gIrVn~V~PG~v~T~~~~~~ 196 (285)
T d1jtva_ 152 ---------------------------NDVYCASKFALEGLCESLAVLLLPF----GVHLSLIECGPVHTAFMEKV 196 (285)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCC------
T ss_pred ---------------------------chHHHHHHHHHHHHHHHHHHHhhcc----CcEEEEEecCCCCChHHHHh
Confidence 4789999999999999999999999 99999999999999998765
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.84 E-value=1.9e-21 Score=149.01 Aligned_cols=98 Identities=29% Similarity=0.334 Sum_probs=85.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-c-ccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-H-LSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~-~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.|+++++|.++|+|++ +|+||+++|..+ . ..+.
T Consensus 88 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~--------------- 152 (251)
T d1vl8a_ 88 VNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN--------------- 152 (251)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS---------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCcc---------------
Confidence 689997522 3889999999999999999999999965 589999999765 3 2211
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+|+..|+|+|+.|+.++ |||||+|+||+|+|+|.+.
T Consensus 153 ----------------------------~~~Y~asKaal~~lt~~lA~e~~~~----gIrVN~I~PG~i~T~~~~~ 196 (251)
T d1vl8a_ 153 ----------------------------ISAYAASKGGVASLTKALAKEWGRY----GIRVNVIAPGWYRTKMTEA 196 (251)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCSTTTHH
T ss_pred ----------------------------ccchHHHHHhHHHHHHHHHHHhccc----CeEEEEEeeCcccCHHHHh
Confidence 3689999999999999999999999 9999999999999999754
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.84 E-value=7.6e-22 Score=151.77 Aligned_cols=98 Identities=23% Similarity=0.355 Sum_probs=85.8
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.|+++++|.++|.|++ +|+||++||..+ ...+.
T Consensus 91 vnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~---------------- 154 (259)
T d2ae2a_ 91 VNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY---------------- 154 (259)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT----------------
T ss_pred EECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccccc----------------
Confidence 689997532 2789999999999999999999999954 589999999988 44332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+|++.|+|+|+.|+.++ ||+||+|+||+|+|+|.+.
T Consensus 155 ---------------------------~~~Y~asKaal~~lt~~lA~el~~~----gIrVN~I~PG~i~T~~~~~ 198 (259)
T d2ae2a_ 155 ---------------------------EAVYGATKGAMDQLTRCLAFEWAKD----NIRVNGVGPGVIATSLVEM 198 (259)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEECSBCSHHHHH
T ss_pred ---------------------------ccchHHHHHHHHHHHHHHHHHhCcC----ceEEEEeeeCcccCHHHHh
Confidence 4789999999999999999999998 9999999999999998643
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.84 E-value=3e-22 Score=153.64 Aligned_cols=100 Identities=19% Similarity=0.205 Sum_probs=85.4
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||.... .++|++++++|+.|+++++|.++|+|++ +|+||++||..+ ...+.
T Consensus 85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~----------------- 147 (253)
T d1hxha_ 85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQ----------------- 147 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTT-----------------
T ss_pred EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccc-----------------
Confidence 689997532 3889999999999999999999999975 699999999988 44332
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|++||+|+..|+|+++.|+.++ +. |||||+|+||+|+|+|.+.
T Consensus 148 --------------------------~~~Y~asKaal~~lt~~lA~e~~~~-g~-~IrVN~I~PG~i~T~~~~~ 193 (253)
T d1hxha_ 148 --------------------------YAGYSASKAAVSALTRAAALSCRKQ-GY-AIRVNSIHPDGIYTPMMQA 193 (253)
T ss_dssp --------------------------BHHHHHHHHHHHHHHHHHHHHHHHH-TC-CEEEEEEEESEECCHHHHH
T ss_pred --------------------------cccccchhHHHHHHHHHHHHHHhhc-CC-CEEEEEEeECCCcCHhHHh
Confidence 4789999999999999999999875 11 4999999999999998643
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.84 E-value=2.8e-21 Score=147.31 Aligned_cols=100 Identities=20% Similarity=0.135 Sum_probs=84.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||+... .++|++++++|+.|+++++|.++|.|++ +++|+++||......+.
T Consensus 82 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~----------------- 144 (242)
T d1ulsa_ 82 VHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLG----------------- 144 (242)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTT-----------------
T ss_pred EECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCC-----------------
Confidence 689998532 2789999999999999999999999976 35677766643344332
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|++||+|+.+|+|+|+.|+.++ |||||+|+||+|+|+|.....
T Consensus 145 --------------------------~~~Y~asKaal~~ltk~lA~ela~~----gIrVN~I~PG~v~T~~~~~~~ 190 (242)
T d1ulsa_ 145 --------------------------QANYAASMAGVVGLTRTLALELGRW----GIRVNTLAPGFIETRMTAKVP 190 (242)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTTSSSC
T ss_pred --------------------------CcchHHHHHHHHHHHHHHHHHHhhh----CcEEEEEeeCcccChhhhcCC
Confidence 4789999999999999999999999 999999999999999987653
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.84 E-value=2.6e-21 Score=147.41 Aligned_cols=106 Identities=25% Similarity=0.303 Sum_probs=87.6
Q ss_pred CCCCCCCcc--------HHHHHHHHhhhhhHHHHHHHHHhhhhcC-------------CccEEEecCCccc-ccccccHH
Q psy16223 1 MNRASTVPF--------AIQAEKTILTNYLGLVRTCVFLFPLLRR-------------HARVVNLSSSAGH-LSQITNLE 58 (153)
Q Consensus 1 innag~~~~--------~~~~~~~~~vN~~g~~~l~~~~lp~l~~-------------~g~iv~~sS~~~~-~~~~~~~~ 58 (153)
|||||.... .++|++++++|++|++.+++.++|.|++ .++||+++|..+. ..+.
T Consensus 88 vnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~---- 163 (248)
T d1snya_ 88 FNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNT---- 163 (248)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCC----
T ss_pred EeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCCC----
Confidence 589987421 2679999999999999999999999963 4789999998873 2111
Q ss_pred HHhhhhccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc
Q psy16223 59 LKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV 138 (153)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v 138 (153)
.....+|++||+|+++|+++++.|+.++ ||+|++|+||+|
T Consensus 164 ------------------------------------~~~~~~Y~aSKaal~~lt~~la~e~~~~----gI~vn~v~PG~v 203 (248)
T d1snya_ 164 ------------------------------------DGGMYAYRTSKSALNAATKSLSVDLYPQ----RIMCVSLHPGWV 203 (248)
T ss_dssp ------------------------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEECCCSB
T ss_pred ------------------------------------CCChHHHHHHHHHHHHHHHHHHHHhCCC----CeEEEEcCCCcc
Confidence 0013689999999999999999999998 999999999999
Q ss_pred cCCCCCCCCCCC
Q psy16223 139 ATNMSSFMGNVN 150 (153)
Q Consensus 139 ~T~~~~~~~~~~ 150 (153)
+|+|.+...+.+
T Consensus 204 ~T~m~~~~~~~~ 215 (248)
T d1snya_ 204 KTDMGGSSAPLD 215 (248)
T ss_dssp CSTTTCTTCSBC
T ss_pred cCCcccccCCCC
Confidence 999998776543
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.84 E-value=2.4e-21 Score=149.26 Aligned_cols=97 Identities=23% Similarity=0.213 Sum_probs=84.3
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.|+++++|.++|+|.+ +++||++||..+ ...+.
T Consensus 90 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~--------------- 154 (261)
T d1geea_ 90 INNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL--------------- 154 (261)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT---------------
T ss_pred eccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcc---------------
Confidence 689998632 2889999999999999999999999953 346999999887 44332
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
..+|++||+|+.+|+|+|+.|+.++ ||+||+|+||+|+|+|..
T Consensus 155 ----------------------------~~~Y~asKaal~~lt~~lA~e~~~~----gIrVN~I~PG~v~T~~~~ 197 (261)
T d1geea_ 155 ----------------------------FVHYAASKGGMKLMTETLALEYAPK----GIRVNNIGPGAINTPINA 197 (261)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSGGGH
T ss_pred ----------------------------ccccccCCccchhhHHHHHHHhhhh----CcEEEEEeeCcCcCHhHh
Confidence 4789999999999999999999999 999999999999999864
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.83 E-value=3.2e-21 Score=147.92 Aligned_cols=97 Identities=20% Similarity=0.219 Sum_probs=84.4
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhh-c--CCccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLL-R--RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l-~--~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.|+++++|.++|.| + ++|+||++||..+ .+.+.
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~--------------- 148 (256)
T d1k2wa_ 84 VNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEAL--------------- 148 (256)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---------------
T ss_pred EeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccccc---------------
Confidence 689997532 28899999999999999999999976 3 2589999999988 44332
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+|+.+|+|+|+.|+.++ |||||+|+||+|+|+|.+
T Consensus 149 ----------------------------~~~Y~asKaal~~lt~~lA~el~~~----gIrVN~V~PG~i~T~~~~ 191 (256)
T d1k2wa_ 149 ----------------------------VGVYCATKAAVISLTQSAGLNLIRH----GINVNAIAPGVVDGEHWD 191 (256)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCTTHH
T ss_pred ----------------------------ccchhhhhhHHHHHHHHHHHHhccc----CeEEEEEecCCCCchhhh
Confidence 4789999999999999999999999 999999999999999853
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.83 E-value=1.8e-21 Score=149.18 Aligned_cols=97 Identities=23% Similarity=0.249 Sum_probs=84.2
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||..+. .++|++++++|+.|+++++|.++|.|.+ +++|+++||..+ ...+.
T Consensus 83 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~--------------- 147 (255)
T d1gega_ 83 VNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE--------------- 147 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---------------
T ss_pred EecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcc---------------
Confidence 689998632 2789999999999999999999998743 478999999887 44332
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+|+.+|+|+|+.|+.++ |||||+|+||+|+|+|..
T Consensus 148 ----------------------------~~~Y~asKaal~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~ 190 (255)
T d1gega_ 148 ----------------------------LAVYSSSKFAVRGLTQTAARDLAPL----GITVNGYCPGIVKTPMWA 190 (255)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBSSHHHH
T ss_pred ----------------------------cccchhCHHHHHhhHHHHHHHhhhh----CcEEEEEecCcccChHHh
Confidence 4789999999999999999999999 999999999999998753
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.83 E-value=9.1e-22 Score=151.01 Aligned_cols=98 Identities=23% Similarity=0.290 Sum_probs=86.5
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcC-----CccEEEecCCcc-cccccccHHHHhhhhccccChHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRR-----HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLT 74 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (153)
|||||.. ..+.|++++++|++|++.+++.++|.|.+ +|+||++||..+ .+.+.
T Consensus 89 vnnAG~~-~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~-------------------- 147 (254)
T d1sbya1 89 INGAGIL-DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ-------------------- 147 (254)
T ss_dssp EECCCCC-CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------------
T ss_pred EeCCCCC-CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCC--------------------
Confidence 6899986 55779999999999999999999999954 489999999988 44332
Q ss_pred HHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 75 DMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+..|+|+|+.|+.+. ||+||+|+||+|+|+|.+.+
T Consensus 148 -----------------------~~~Y~asKaal~~~t~~la~el~~~----gIrVn~I~PG~v~T~~~~~~ 192 (254)
T d1sbya1 148 -----------------------VPVYSASKAAVVSFTNSLAKLAPIT----GVTAYSINPGITRTPLVHTF 192 (254)
T ss_dssp -----------------------SHHHHHHHHHHHHHHHHHHHHHHHH----SEEEEEEEECSEESHHHHSC
T ss_pred -----------------------CHHHHHHHHHHHHHHHHHHhhcccc----CeEEEEEEeCCCcCcccccc
Confidence 4789999999999999999999999 99999999999999986654
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.83 E-value=1.7e-21 Score=149.34 Aligned_cols=97 Identities=27% Similarity=0.296 Sum_probs=84.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhh--c-C-CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLL--R-R-HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l--~-~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||.... .++|++++++|+.|+++++|+++|+| . + .++||+++|..+ .+.+.
T Consensus 84 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~-------------- 149 (257)
T d2rhca1 84 VNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH-------------- 149 (257)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTT--------------
T ss_pred EecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccccc--------------
Confidence 689998522 27899999999999999999999975 2 2 489999999888 54432
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+|+..|+|+|+.|+.++ |||||+|+||+|+|+|..
T Consensus 150 -----------------------------~~~Y~asKaal~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~ 192 (257)
T d2rhca1 150 -----------------------------AAPYSASKHGVVGFTKALGLELART----GITVNAVCPGFVETPMAA 192 (257)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHTTTS----EEEEEEEEECSBCSHHHH
T ss_pred -----------------------------chhHHHHHHHHHHHHHHHHHHhhhh----CcEEEEEeeCCCCCHHHH
Confidence 4789999999999999999999998 999999999999999854
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.83 E-value=2.3e-21 Score=149.04 Aligned_cols=96 Identities=22% Similarity=0.207 Sum_probs=84.2
Q ss_pred CCCCCCCcc--------HHHHHHHHhhhhhHHHHHHHHHhhhhc--CCccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF--------AIQAEKTILTNYLGLVRTCVFLFPLLR--RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~--------~~~~~~~~~vN~~g~~~l~~~~lp~l~--~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.+++++++.++|.|. +.|+||++||..+ ...+.
T Consensus 87 VnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~--------------- 151 (260)
T d1zema1 87 FNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN--------------- 151 (260)
T ss_dssp EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT---------------
T ss_pred hhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcc---------------
Confidence 589986421 278999999999999999999999994 4699999999888 54432
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|++||+|+.+|+|+|+.|+.++ ||+||+|+||+|+|+|.
T Consensus 152 ----------------------------~~~Y~asKaal~~ltk~lA~el~~~----gIrVN~I~PG~v~T~~~ 193 (260)
T d1zema1 152 ----------------------------MAAYGTSKGAIIALTETAALDLAPY----NIRVNAISPGYMGPGFM 193 (260)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSSHH
T ss_pred ----------------------------hHHHHHHHHHHHHHHHHHHHHhhhh----CCEEEEeccCcccCcch
Confidence 4789999999999999999999999 99999999999999874
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=1.9e-21 Score=149.27 Aligned_cols=99 Identities=16% Similarity=0.191 Sum_probs=86.5
Q ss_pred CCCCCCCc------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.|+++++|.++|+|++ +++||++||..+ ...+.
T Consensus 93 vnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~----------------- 155 (255)
T d1fmca_ 93 VNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN----------------- 155 (255)
T ss_dssp EECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT-----------------
T ss_pred eeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccc-----------------
Confidence 58998752 23789999999999999999999999965 679999999887 44332
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+.+|+|+|+.|+.++ ||+||+|+||+|+|+|.+..
T Consensus 156 --------------------------~~~Y~asKaal~~lt~~lA~el~~~----gIrVN~I~PG~i~T~~~~~~ 200 (255)
T d1fmca_ 156 --------------------------MTSYASSKAAASHLVRNMAFDLGEK----NIRVNGIAPGAILTDALKSV 200 (255)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHHTT----TEEEEEEEECSBCSHHHHTT
T ss_pred --------------------------cccchhHHHHHHHHHHHHHHHhCcc----CeEEEEeeeCcCcChHhhcc
Confidence 4799999999999999999999998 99999999999999987654
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.83 E-value=2.6e-21 Score=148.16 Aligned_cols=99 Identities=23% Similarity=0.262 Sum_probs=84.7
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.|+++++|.++|.|++ +++||++||..+ ...+.
T Consensus 87 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~--------------- 151 (251)
T d1zk4a1 87 VNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS--------------- 151 (251)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT---------------
T ss_pred EeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCC---------------
Confidence 689988633 3889999999999999999999999965 368999999888 44332
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHh--ccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKF--DCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~--~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+++.+|+|+++.|+ .+. ||+||+|+||+|+|+|....
T Consensus 152 ----------------------------~~~Y~asKaal~~lt~~lA~e~~l~~~----gIrVN~I~PG~i~T~~~~~~ 198 (251)
T d1zk4a1 152 ----------------------------LGAYNASKGAVRIMSKSAALDCALKDY----DVRVNTVHPGYIKTPLVDDL 198 (251)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHHHTTC----SEEEEEEEECCBCCHHHHTS
T ss_pred ----------------------------chhHHHHHHHHhcchHHHHHHHhcCCC----cEEEEEEeCCCCCChhHHhc
Confidence 4789999999999999999985 466 89999999999999987654
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.83 E-value=2.9e-21 Score=147.25 Aligned_cols=112 Identities=22% Similarity=0.320 Sum_probs=78.4
Q ss_pred CCCCCCCcc--------HHHHHHHHhhhhhHHHHHHHHHhhhhcC-------------CccEEEecCCcc-cccccccHH
Q psy16223 1 MNRASTVPF--------AIQAEKTILTNYLGLVRTCVFLFPLLRR-------------HARVVNLSSSAG-HLSQITNLE 58 (153)
Q Consensus 1 innag~~~~--------~~~~~~~~~vN~~g~~~l~~~~lp~l~~-------------~g~iv~~sS~~~-~~~~~~~~~ 58 (153)
|||||+... .++|++++++|++|++.+++.++|+|++ .+++++++|..+ .....
T Consensus 86 innAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~---- 161 (250)
T d1yo6a1 86 INNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT---- 161 (250)
T ss_dssp EECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC----
T ss_pred EEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCc----
Confidence 589997522 2789999999999999999999999963 257888888765 22111
Q ss_pred HHhhhhccccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcc
Q psy16223 59 LKKRLMEDCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYV 138 (153)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v 138 (153)
....+.+..+|++||+|+++|+++|+.|+.+. ||+|++||||+|
T Consensus 162 --------------------------------~~~~~~~~~aY~aSKaal~~l~~~la~el~~~----gI~v~~i~PG~v 205 (250)
T d1yo6a1 162 --------------------------------SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDD----NVLVVNFCPGWV 205 (250)
T ss_dssp --------------------------------STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGG----TCEEEEEECCCC
T ss_pred --------------------------------ccccchhHHHHHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCCC
Confidence 01112234679999999999999999999998 999999999999
Q ss_pred cCCCCCCCCCCCCC
Q psy16223 139 ATNMSSFMGNVNIF 152 (153)
Q Consensus 139 ~T~~~~~~~~~~~~ 152 (153)
+|+|.+.....++|
T Consensus 206 ~T~m~~~~~~~~~e 219 (250)
T d1yo6a1 206 QTNLGGKNAALTVE 219 (250)
T ss_dssp -------------H
T ss_pred CCCCCCCCCCCCHH
Confidence 99999877666654
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.83 E-value=5.9e-21 Score=146.88 Aligned_cols=99 Identities=23% Similarity=0.237 Sum_probs=79.8
Q ss_pred CCCCCCCc-----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-c-ccccccHHHHhhhhcc
Q psy16223 1 MNRASTVP-----------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-H-LSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~-----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~-~~~~~~~~~~~~~~~~ 66 (153)
|||||... ..++|++++++|+.|++.++|.++|+|++ ++++|+++|..+ . ..+.
T Consensus 90 vnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~------------ 157 (264)
T d1spxa_ 90 VNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPD------------ 157 (264)
T ss_dssp EECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTT------------
T ss_pred ecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCC------------
Confidence 58998741 23789999999999999999999999965 577887777654 3 3222
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+++|+|+|+.|+.++ |||||+|+||+|+|+|....
T Consensus 158 -------------------------------~~~Y~asKaal~~lt~~lA~el~~~----gIrVN~V~PG~v~T~~~~~~ 202 (264)
T d1spxa_ 158 -------------------------------FPYYSIAKAAIDQYTRNTAIDLIQH----GIRVNSISPGLVATGFGSAM 202 (264)
T ss_dssp -------------------------------SHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCCCC----
T ss_pred -------------------------------chhhhhhhhhHHHHHHHHHHHhccc----CeEEEEEeeCCCCCcchhcc
Confidence 4689999999999999999999999 99999999999999998755
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.83 E-value=7.9e-21 Score=146.43 Aligned_cols=101 Identities=14% Similarity=0.055 Sum_probs=86.0
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|+++++|.++|+|.+ +|+||+++|..+ ...+.
T Consensus 87 VnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~-------------- 152 (268)
T d2bgka1 87 FGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG-------------- 152 (268)
T ss_dssp EECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT--------------
T ss_pred ccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccc--------------
Confidence 58998642 12789999999999999999999999954 589999999887 43221
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
. ...|++||+|+++|+|+|+.||.++ |||||+|+||+|+|+|.....
T Consensus 153 ---------------------------~-~~~Y~asKaal~~lt~~lA~el~~~----gIrVN~I~PG~i~T~~~~~~~ 199 (268)
T d2bgka1 153 ---------------------------V-SHVYTATKHAVLGLTTSLCTELGEY----GIRVNCVSPYIVASPLLTDVF 199 (268)
T ss_dssp ---------------------------S-CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESCCSCCCCTTSS
T ss_pred ---------------------------c-ccccchhHHHHHhCHHHHHHHhChh----CeEEEecCCCCccChHHhhhh
Confidence 1 2479999999999999999999999 999999999999999987654
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.82 E-value=3.7e-21 Score=151.07 Aligned_cols=99 Identities=13% Similarity=0.108 Sum_probs=86.2
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||+... .++|++++++|+.|++.++|.++|+|++ .|+||++||..+ .+.+.
T Consensus 95 VnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~---------------- 158 (302)
T d1gz6a_ 95 VNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG---------------- 158 (302)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----------------
T ss_pred EECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCC----------------
Confidence 699998633 2789999999999999999999999964 589999999888 54432
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+..|+|+|+.|+.++ ||+||+|+||++.|.+....
T Consensus 159 ---------------------------~~~Y~asKaal~~lt~~la~E~~~~----gIrVN~I~PG~~~t~~~~~~ 203 (302)
T d1gz6a_ 159 ---------------------------QANYSAAKLGLLGLANTLVIEGRKN----NIHCNTIAPNAGSRMTETVM 203 (302)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEEECCSTTTGGGS
T ss_pred ---------------------------cHHHHHHHHHHHHHHHHHHHHHhcc----CCceeeeCCCCCCcchhhcC
Confidence 4789999999999999999999999 99999999999988775543
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=4.4e-21 Score=146.49 Aligned_cols=102 Identities=23% Similarity=0.236 Sum_probs=85.3
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .+.|++++++|+.|++++++.++|.|++ .|+||++||..+ .+.+.
T Consensus 89 innag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~---------------- 152 (244)
T d1yb1a_ 89 VNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF---------------- 152 (244)
T ss_dssp EECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH----------------
T ss_pred EeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCC----------------
Confidence 588987632 2789999999999999999999999965 489999999998 55433
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+..|+++|+.|+.+. ...||+|++|+||+|+|+|.+..
T Consensus 153 ---------------------------~~~Y~asKaal~~~~~~La~El~~~-~~~gI~V~~i~PG~v~T~~~~~~ 200 (244)
T d1yb1a_ 153 ---------------------------LLAYCSSKFAAVGFHKTLTDELAAL-QITGVKTTCLCPNFVNTGFIKNP 200 (244)
T ss_dssp ---------------------------HHHHHHHHHHHHHHHHHHHHHHHHT-TCTTEEEEEEEETHHHHCSTTCT
T ss_pred ---------------------------cHHHHHHHHHHHHHHHHHHHHHHhh-cCCCEEEEEEEcCCCCChhhhCc
Confidence 3789999999999999999998753 22279999999999999998653
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.82 E-value=2.8e-21 Score=146.41 Aligned_cols=99 Identities=13% Similarity=-0.010 Sum_probs=85.6
Q ss_pred CCCCCCCc--------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP--------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~--------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..+.|++++++|+.+++.+++.++|+|+++|+||++||..+ ...+.
T Consensus 76 InnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~----------------- 138 (236)
T d1dhra_ 76 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG----------------- 138 (236)
T ss_dssp EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-----------------
T ss_pred EECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccC-----------------
Confidence 58998531 12779999999999999999999999999999999999988 44332
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc--cccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD--CELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~--~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+++|+|+|+.|+. +. ||+||+|+||+|+|+|.+..
T Consensus 139 --------------------------~~~Y~asKaal~~lt~~la~El~~~~~----gI~vn~v~PG~v~T~~~~~~ 185 (236)
T d1dhra_ 139 --------------------------MIGYGMAKGAVHQLCQSLAGKNSGMPS----GAAAIAVLPVTLDTPMNRKS 185 (236)
T ss_dssp --------------------------BHHHHHHHHHHHHHHHHHTSTTSSCCT----TCEEEEEEESCEECHHHHHH
T ss_pred --------------------------CcccHHHHHHHHHHHHHHHHHhccCCC----cEEEEEEEeccCcCCcchhh
Confidence 47899999999999999999998 45 89999999999999986543
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.82 E-value=1.2e-20 Score=142.92 Aligned_cols=98 Identities=12% Similarity=0.140 Sum_probs=85.1
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||.... .++|++++++|+.+++.++|.++|.|++ .|+||+++|..+ ...+.
T Consensus 71 VnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~---------------- 134 (234)
T d1o5ia_ 71 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN---------------- 134 (234)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------------
T ss_pred EecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccc----------------
Confidence 589987522 3789999999999999999999999964 589999999877 43222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+|+..|+|+++.|+.++ |||||+|+||+++|+|...
T Consensus 135 ---------------------------~~~Y~asKaal~~ltk~lA~ela~~----gIrVN~I~PG~v~T~~~~~ 178 (234)
T d1o5ia_ 135 ---------------------------LYTSNSARMALTGFLKTLSFEVAPY----GITVNCVAPGWTETERVKE 178 (234)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTHHH
T ss_pred ---------------------------cccchhHHHHHHHHHHHHHHHhccc----CeEEeecccCccchhhhhh
Confidence 4789999999999999999999999 9999999999999998754
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=8.8e-21 Score=144.58 Aligned_cols=99 Identities=20% Similarity=0.257 Sum_probs=85.6
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhh-c--CCccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLL-R--RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l-~--~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.+++.+++.++|.| + .+|+||++||..+ ...+.
T Consensus 81 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~--------------- 145 (244)
T d1pr9a_ 81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN--------------- 145 (244)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT---------------
T ss_pred EeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccc---------------
Confidence 589988532 28899999999999999999999976 3 2589999999988 44332
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|++.|+|+|+.||.++ |||||+|+||+|+|+|.+..
T Consensus 146 ----------------------------~~~Y~asKaal~~lt~~lA~el~~~----gIrvN~I~PG~v~T~~~~~~ 190 (244)
T d1pr9a_ 146 ----------------------------HSVYCSTKGALDMLTKVMALELGPH----KIRVNAVNPTVVMTSMGQAT 190 (244)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCSHHHHTT
T ss_pred ----------------------------hhhhhhhHHHHHHHHHHHHHHhCCC----cEEEEEEeeCcCcChHHhhh
Confidence 4789999999999999999999998 99999999999999987654
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.82 E-value=8.3e-21 Score=144.63 Aligned_cols=99 Identities=18% Similarity=0.186 Sum_probs=85.1
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhc---CCccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLR---RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~---~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.|+++++|.++|.|. .+|+||+++|..+ ...+.
T Consensus 79 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------- 143 (242)
T d1cyda_ 79 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN--------------- 143 (242)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT---------------
T ss_pred EECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCc---------------
Confidence 689997532 278999999999999999999999763 2589999999887 44332
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|+|+..|+|+|+.|+.++ |||||+|+||+|+|+|....
T Consensus 144 ----------------------------~~~Y~asKaal~~lt~~lA~e~~~~----gIrvN~I~PG~i~T~~~~~~ 188 (242)
T d1cyda_ 144 ----------------------------LITYSSTKGAMTMLTKAMAMELGPH----KIRVNSVNPTVVLTDMGKKV 188 (242)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBTTHHHHHH
T ss_pred ----------------------------cccccchHHHHHHHHHHHHHHhCcc----CeecccCCCCCccCHHHHhh
Confidence 4789999999999999999999999 99999999999999986543
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.81 E-value=1.9e-20 Score=143.05 Aligned_cols=100 Identities=18% Similarity=0.151 Sum_probs=81.0
Q ss_pred CCCCCCCcc-----------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVPF-----------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~~-----------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||..+. .++|++++++|+.+++.++|.++|.|+++|+||++||..+ ...+.
T Consensus 91 Vnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~-------------- 156 (256)
T d1ulua_ 91 VHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK-------------- 156 (256)
T ss_dssp EECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT--------------
T ss_pred EeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCC--------------
Confidence 588987532 2679999999999999999999999999999999999888 44332
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
...|+++|+|+.+|+|+++.||.++ |||||+|+||+|+|++.....
T Consensus 157 -----------------------------~~~Y~asKaal~~ltr~lA~ela~~----gIrVN~I~PG~i~t~~~~~~~ 202 (256)
T d1ulua_ 157 -----------------------------YNVMAIAKAALEASVRYLAYELGPK----GVRVNAISAGPVRTVAARSIP 202 (256)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCC---------
T ss_pred -----------------------------chHHHHHHHHHHHHHHHHHHHhccc----CCEEeeeccceeeeccccchh
Confidence 4789999999999999999999999 999999999999999887643
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.81 E-value=2.6e-20 Score=144.22 Aligned_cols=98 Identities=16% Similarity=0.154 Sum_probs=82.9
Q ss_pred CCCCCCCcc------------HHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhcc
Q psy16223 1 MNRASTVPF------------AIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~~------------~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~ 66 (153)
|||||.... .+.|++++++|+.|+++++|.++|.|++ +|+||+++|..+ ...+.
T Consensus 84 vnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~------------ 151 (276)
T d1bdba_ 84 IPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGG------------ 151 (276)
T ss_dssp ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSS------------
T ss_pred cccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCC------------
Confidence 589986421 1459999999999999999999999954 689999999887 44332
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+..|+|+|+.|+.+ +||||+|+||+|+|+|....
T Consensus 152 -------------------------------~~~Y~asKaal~~ltr~lA~ela~-----~IrVN~I~PG~i~T~~~~~~ 195 (276)
T d1bdba_ 152 -------------------------------GPLYTAAKHAIVGLVRELAFELAP-----YVRVNGVGSGGINSDLRGPS 195 (276)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHHHHHHHHTT-----TCEEEEEEECCCCSCCCCCG
T ss_pred -------------------------------CchHHHHHHHHHHHHHHHHHHhhc-----ceEEcccCCCCEecCcCCcc
Confidence 478999999999999999999974 69999999999999997543
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.81 E-value=3.8e-20 Score=142.14 Aligned_cols=102 Identities=25% Similarity=0.274 Sum_probs=81.9
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||... ..++|++++++|+.+++.+++.++|.|.. .|+||++||..+ .+.+.
T Consensus 89 innag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~---------------- 152 (258)
T d1ae1a_ 89 VNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS---------------- 152 (258)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT----------------
T ss_pred eccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccccc----------------
Confidence 47888763 33889999999999999999999999954 689999999988 55433
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMGNV 149 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~ 149 (153)
...|+++|+|+++|+|.|++|+.+. |||||+|+||+|+|+|.......
T Consensus 153 ---------------------------~~~Y~~sK~al~~lt~~lA~el~~~----gIrvN~I~PG~i~T~~~~~~~~~ 200 (258)
T d1ae1a_ 153 ---------------------------VSLYSASKGAINQMTKSLACEWAKD----NIRVNSVAPGVILTPLVETAIKK 200 (258)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBC----------
T ss_pred ---------------------------chhHHHHHHHHHHHHHHHHHhcCcC----cEEEEEEeeCcccCcchhhhhhh
Confidence 4789999999999999999999999 99999999999999998766443
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.81 E-value=2.2e-20 Score=144.30 Aligned_cols=99 Identities=24% Similarity=0.228 Sum_probs=82.2
Q ss_pred CCCCCCCcc-----------HHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCc-c-cccccccHHHHhhhhcc
Q psy16223 1 MNRASTVPF-----------AIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSA-G-HLSQITNLELKKRLMED 66 (153)
Q Consensus 1 innag~~~~-----------~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~-~-~~~~~~~~~~~~~~~~~ 66 (153)
|||||.... .+.|++++++|+.|++.++|.++|.|++ ++++|+++|.. + ...+.
T Consensus 90 vnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~------------ 157 (272)
T d1xkqa_ 90 VNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPD------------ 157 (272)
T ss_dssp EECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCS------------
T ss_pred EeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCC------------
Confidence 589987522 1469999999999999999999999965 57777777754 3 33322
Q ss_pred ccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 67 CVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+..|+|+|+.|+.++ |||||+|+||+|+|+|....
T Consensus 158 -------------------------------~~~Y~asKaal~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~~~ 202 (272)
T d1xkqa_ 158 -------------------------------FLYYAIAKAALDQYTRSTAIDLAKF----GIRVNSVSPGMVETGFTNAM 202 (272)
T ss_dssp -------------------------------SHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCBCSSHHHHT
T ss_pred -------------------------------cchhhhHHHHHHHHHHHHHHHhccc----CeEEEEEeeCCCcchhhhcc
Confidence 4789999999999999999999998 99999999999999987543
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.80 E-value=2e-20 Score=144.72 Aligned_cols=98 Identities=22% Similarity=0.132 Sum_probs=82.3
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||... ..++|++++++|+.|++.++|.++|.|++ +++|+++||..+ ...+.
T Consensus 89 VnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~-------------- 154 (274)
T d1xhla_ 89 VNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSG-------------- 154 (274)
T ss_dssp EECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTT--------------
T ss_pred EeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCC--------------
Confidence 58998641 12679999999999999999999999954 477887777666 43322
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSF 145 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~ 145 (153)
...|+++|+|+.+|+|+|+.|+.++ |||||+|+||+|+|+|...
T Consensus 155 -----------------------------~~~Y~asKaal~~ltk~lA~ela~~----gIrVN~I~PG~i~T~~~~~ 198 (274)
T d1xhla_ 155 -----------------------------YPYYACAKAALDQYTRCTAIDLIQH----GVRVNSVSPGAVATGFMGA 198 (274)
T ss_dssp -----------------------------SHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCSSHHHH
T ss_pred -----------------------------CceehhhhhHHHHHHHHHHHHHhHh----CCceeeeccCCCcCchhhh
Confidence 4789999999999999999999999 9999999999999997643
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=2.4e-20 Score=146.03 Aligned_cols=99 Identities=17% Similarity=0.218 Sum_probs=84.0
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcccccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||.... .++|++++++|+.|++++++.++|.|.+ +++||++||......+.
T Consensus 99 VnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~~----------------- 161 (297)
T d1yxma1 99 VNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPL----------------- 161 (297)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTT-----------------
T ss_pred EeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccccc-----------------
Confidence 689987532 2789999999999999999999999965 58899887654343332
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|+|+.+|+|+++.|+.++ ||+||+|+||+|+|+|....
T Consensus 162 --------------------------~~~Y~asKaal~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~~~ 206 (297)
T d1yxma1 162 --------------------------AVHSGAARAGVYNLTKSLALEWACS----GIRINCVAPGVIYSQTAVEN 206 (297)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHTGGG----TEEEEEEEECSBCCTGGGTT
T ss_pred --------------------------cccchhHHHHHHHHHHHHHHHhccc----CceEEEeeeCcCcCcchhhh
Confidence 4789999999999999999999999 99999999999999987544
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.9e-20 Score=143.29 Aligned_cols=98 Identities=23% Similarity=0.294 Sum_probs=85.0
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcC-----CccEEEecCCcc-cccccccHHHHhhhhccccChHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRR-----HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLT 74 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (153)
|||||.... ++|++++++|+.+++.+++.++|+|++ +|+||++||..+ .+.+.
T Consensus 87 VnnAg~~~~-~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~-------------------- 145 (254)
T d2gdza1 87 VNNAGVNNE-KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ-------------------- 145 (254)
T ss_dssp EECCCCCCS-SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------------
T ss_pred ccccccccc-ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCC--------------------
Confidence 589998744 569999999999999999999999964 378999999988 54432
Q ss_pred HHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHH--HHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 75 DMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRI--YQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~--l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+..|+|+ |+.|+.+. |||||+|+||+|+|+|....
T Consensus 146 -----------------------~~~Y~asKaal~~ltrs~ala~e~~~~----gIrVN~I~PG~i~T~~~~~~ 192 (254)
T d2gdza1 146 -----------------------QPVYCASKHGIVGFTRSAALAANLMNS----GVRLNAICPGFVNTAILESI 192 (254)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHHHHHHHHHTC----CEEEEEEEESCBSSHHHHGG
T ss_pred -----------------------ccchHHHHHHHHHHHHHHHHHHHhcCC----CEEEEEEEcCCCCChhhhhc
Confidence 47899999999999996 78899988 99999999999999987543
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.80 E-value=1.7e-20 Score=141.69 Aligned_cols=101 Identities=14% Similarity=0.031 Sum_probs=85.3
Q ss_pred CCCCCCCcc--------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVPF--------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~~--------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||.... .+.|+.++++|+.+++.++++++|+|+++|+||++||..+ ...+.
T Consensus 76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~----------------- 138 (235)
T d1ooea_ 76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS----------------- 138 (235)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-----------------
T ss_pred EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCccc-----------------
Confidence 689986311 2679999999999999999999999999999999999887 54432
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+.+|+++|+.|+... +. +|+|++|+||+++|+|.+..
T Consensus 139 --------------------------~~~Y~asKaal~~l~~~la~e~~~~-~~-~i~v~~i~Pg~~~T~~~~~~ 185 (235)
T d1ooea_ 139 --------------------------MIGYGMAKAAVHHLTSSLAAKDSGL-PD-NSAVLTIMPVTLDTPMNRKW 185 (235)
T ss_dssp --------------------------BHHHHHHHHHHHHHHHHHHSTTSSC-CT-TCEEEEEEESCBCCHHHHHH
T ss_pred --------------------------ccchHHHHHHHHHHHHHHHHHhccC-CC-ceEEEEEecCcCcCcchhhh
Confidence 4799999999999999999999731 11 79999999999999986544
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=5.7e-20 Score=140.09 Aligned_cols=97 Identities=22% Similarity=0.159 Sum_probs=83.8
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC--CccEEEecCCcc-c-ccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR--HARVVNLSSSAG-H-LSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~g~iv~~sS~~~-~-~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++.+++|+.+++.+++.++|.|.+ .|+||+++|..+ . +.+.
T Consensus 79 Vn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~--------------- 143 (245)
T d2ag5a1 79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVN--------------- 143 (245)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTT---------------
T ss_pred EecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccc---------------
Confidence 588887633 2789999999999999999999998854 689999999876 3 2221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
..+|+++|+|+++|+|+|+.||.++ |||||+|+||+|+|+|.+
T Consensus 144 ----------------------------~~~Y~~sKaal~~l~r~lA~e~~~~----gIrvN~I~PG~i~T~~~~ 186 (245)
T d2ag5a1 144 ----------------------------RCVYSTTKAAVIGLTKSVAADFIQQ----GIRCNCVCPGTVDTPSLQ 186 (245)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESCEECHHHH
T ss_pred ----------------------------hhHHHHHHHHHHHHHHHHHHHhhhh----CcEEEEEeeceeechhhH
Confidence 4789999999999999999999999 999999999999998864
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.79 E-value=4.8e-20 Score=141.25 Aligned_cols=97 Identities=23% Similarity=0.188 Sum_probs=84.6
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-c-ccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-H-LSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~-~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||.... .++|++++++|+.+++.++|.++|.|++++++++++|..+ . +.+.
T Consensus 89 innag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~----------------- 151 (259)
T d1ja9a_ 89 MSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN----------------- 151 (259)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCS-----------------
T ss_pred EeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCC-----------------
Confidence 689997532 2789999999999999999999999999899999988776 3 2222
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|+++|+|+..|+|+|++|+.+. |||||+|+||+|+|+|.+
T Consensus 152 --------------------------~~~Y~asK~al~~l~r~lA~e~~~~----gIrvN~I~PG~i~T~~~~ 194 (259)
T d1ja9a_ 152 --------------------------HALYAGSKAAVEGFCRAFAVDCGAK----GVTVNCIAPGGVKTDMFD 194 (259)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBSSHHHH
T ss_pred --------------------------chhHHHHHHHHHHHHHHHHHHHhhc----CeEEeccCcCCccChhhh
Confidence 4789999999999999999999998 999999999999998753
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.79 E-value=7.2e-20 Score=140.05 Aligned_cols=95 Identities=16% Similarity=0.147 Sum_probs=80.9
Q ss_pred CCCCCCCc----------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC----CccEEEecCCcc-cccccccHHHHhhhhc
Q psy16223 1 MNRASTVP----------FAIQAEKTILTNYLGLVRTCVFLFPLLRR----HARVVNLSSSAG-HLSQITNLELKKRLME 65 (153)
Q Consensus 1 innag~~~----------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~ 65 (153)
|||||... +.++|++++++|+.|++++++.++|+|++ .++||++||..+ .+.+.
T Consensus 97 vnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~----------- 165 (259)
T d1oaaa_ 97 INNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKG----------- 165 (259)
T ss_dssp EECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTT-----------
T ss_pred EecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCcc-----------
Confidence 58888631 12689999999999999999999999975 269999999988 54432
Q ss_pred cccChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 66 DCVSERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++++|+|+|+.| .. ||+||+|+||+|+|+|.+
T Consensus 166 --------------------------------~~~Y~asKaal~~lt~~la~e--~~----gIrVn~v~PG~i~T~~~~ 206 (259)
T d1oaaa_ 166 --------------------------------WGLYCAGKAARDMLYQVLAAE--EP----SVRVLSYAPGPLDNDMQQ 206 (259)
T ss_dssp --------------------------------CHHHHHHHHHHHHHHHHHHHH--CT----TEEEEEEECCSBSSHHHH
T ss_pred --------------------------------chHHHHHHHHHHHHHHHHHhC--CC----CCEEEEEEcCCCCCHHHH
Confidence 478999999999999999998 44 899999999999999864
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=2.6e-19 Score=135.80 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=76.2
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC--------CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHH
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR--------HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFM 81 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~--------~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (153)
+.|++++++|+.|+++++|.++|.|.. +|+||++||..+ .+.+.
T Consensus 107 ~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~--------------------------- 159 (248)
T d2o23a1 107 EDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG--------------------------- 159 (248)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT---------------------------
T ss_pred HHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCC---------------------------
Confidence 789999999999999999999998742 479999999988 54332
Q ss_pred HHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCCC
Q psy16223 82 DITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMGN 148 (153)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~~ 148 (153)
..+|+++|+|+.+|+|+|+.|+.++ ||+||+|+||+|+|+|......
T Consensus 160 ----------------~~~Y~asKaal~~lt~~la~e~~~~----gIrvN~I~PG~i~T~~~~~~~~ 206 (248)
T d2o23a1 160 ----------------QAAYSASKGGIVGMTLPIARDLAPI----GIRVMTIAPGLFGTPLLTSLPE 206 (248)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCC-------
T ss_pred ----------------chHHHHHHHHHHHHHHHHHHHhccc----CcceeeeccCceecchhhcCCH
Confidence 4789999999999999999999999 9999999999999999876543
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=9.7e-20 Score=140.23 Aligned_cols=99 Identities=21% Similarity=0.264 Sum_probs=84.1
Q ss_pred CCCCCCCc-------cHHHHHHHHhhhhhHHHHHHHHHhhhhcC-CccEEEecCCcc-cccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP-------FAIQAEKTILTNYLGLVRTCVFLFPLLRR-HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~-------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~-~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... +.++|++++++|+.|++.+++.++|.|++ +|+||++||..+ .+.+.
T Consensus 97 i~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~----------------- 159 (269)
T d1xu9a_ 97 ILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM----------------- 159 (269)
T ss_dssp EECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT-----------------
T ss_pred ccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCC-----------------
Confidence 47887752 23789999999999999999999999975 689999999988 55443
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+|+.+|+++|+.|+..+ +. ||+|++|+||+|+|+|..
T Consensus 160 --------------------------~~~Y~asKaal~~~~~~La~El~~~-~~-~I~V~~v~PG~v~T~~~~ 204 (269)
T d1xu9a_ 160 --------------------------VAAYSASKFALDGFFSSIRKEYSVS-RV-NVSITLCVLGLIDTETAM 204 (269)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHHHH-TC-CCEEEEEEECCBCCHHHH
T ss_pred --------------------------chHHHHHHHHHHHHHHHHHHHhhhc-CC-CEEEEEEecCcCCCcHHH
Confidence 4799999999999999999999754 11 599999999999999854
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.77 E-value=3.2e-19 Score=140.93 Aligned_cols=100 Identities=10% Similarity=0.213 Sum_probs=84.0
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccCh
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSE 70 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~ 70 (153)
|||||..+ ..++|++++++|+.+.+.++|+++|+|+++|+||++||..+ ...|.
T Consensus 118 Vnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~~p~---------------- 181 (329)
T d1uh5a_ 118 VHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPG---------------- 181 (329)
T ss_dssp EECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTT----------------
T ss_pred ccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccceeehhcccccc----------------
Confidence 57888642 12789999999999999999999999999999999999877 43322
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhcc-ccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 71 RQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDC-ELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~-~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
+ ...|+++|+++++|+|+|+.||.+ . |||||+|+||+|+|++.+..
T Consensus 182 -------------------------y-~~~y~asKaal~~ltr~lA~Ela~~~----gIRVNaI~PG~i~T~a~~~i 228 (329)
T d1uh5a_ 182 -------------------------Y-GGGMSSAKAALESDTRVLAYHLGRNY----NIRINTISAGPLKSRAATAI 228 (329)
T ss_dssp -------------------------C-TTTHHHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCCCCTTGGGC
T ss_pred -------------------------c-chhhhhhhccccccchhhHHHHhccc----CcEEEEEecCcccchhhhcc
Confidence 1 246999999999999999999974 6 89999999999999765543
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.76 E-value=4.1e-19 Score=136.78 Aligned_cols=99 Identities=18% Similarity=0.238 Sum_probs=83.9
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (153)
|||+|.... .++|++++++|+.+++.++|.++|+|++++++++++|..+...+.
T Consensus 101 V~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~------------------- 161 (272)
T d1g0oa_ 101 CSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV------------------- 161 (272)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC-------------------
T ss_pred ccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccc-------------------
Confidence 477876522 278999999999999999999999999999999999887632111
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 74 TDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
.....|+++|+|+..|+|+|+.||.++ |||||+|+||+|+|+|.+
T Consensus 162 ----------------------~~~~~Y~asKaal~~ltk~lA~e~~~~----gIrVN~I~PG~v~T~~~~ 206 (272)
T d1g0oa_ 162 ----------------------PKHAVYSGSKGAIETFARCMAIDMADK----KITVNVVAPGGIKTDMYH 206 (272)
T ss_dssp ----------------------SSCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBSSHHHH
T ss_pred ----------------------cchhhHHHHHHHHHHHHHHHHHHhchh----CeEEEEEccCCcCChHHH
Confidence 113679999999999999999999998 999999999999998753
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.76 E-value=1.7e-19 Score=137.19 Aligned_cols=99 Identities=22% Similarity=0.154 Sum_probs=84.5
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQL 73 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (153)
|||||.... .++|++++++|+.+++.++|.++|+|++++.|+++||......+.
T Consensus 84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~------------------- 144 (241)
T d2a4ka1 84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFG------------------- 144 (241)
T ss_dssp EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHH-------------------
T ss_pred ccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccC-------------------
Confidence 578876422 278999999999999999999999999888888777766543332
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 74 TDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|+|+..|+|+|++|+.++ ||+||+|+||+|+|+|....
T Consensus 145 ------------------------~~~Y~~sK~al~~lt~~lA~el~~~----gIrvN~I~PG~v~T~~~~~~ 189 (241)
T d2a4ka1 145 ------------------------LAHYAAGKLGVVGLARTLALELARK----GVRVNVLLPGLIQTPMTAGL 189 (241)
T ss_dssp ------------------------HHHHHHCSSHHHHHHHHHHHHHTTT----TCEEEEEEECSBCCGGGTTS
T ss_pred ------------------------ccccchhhHHHHHHHHHHHHHHhHh----CCEEeeeccCcCCCHHHHhh
Confidence 3689999999999999999999998 99999999999999998754
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.76 E-value=6.4e-19 Score=135.03 Aligned_cols=106 Identities=21% Similarity=0.245 Sum_probs=83.6
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhc---CCccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLR---RHARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~---~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|++++++|+.|++++++.++|.|. .+++|++++|... .....
T Consensus 92 VnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~--------------- 156 (260)
T d1h5qa_ 92 IANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS--------------- 156 (260)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE---------------
T ss_pred cccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc---------------
Confidence 589987522 278999999999999999999999983 2478888887665 22111
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
.... .-....|+++|+|+..|+|+|+.||.++ |||||+|+||+|+|+|....
T Consensus 157 -------------------~~~~--~~~~~~Y~asKaal~~lt~~lA~el~~~----gIrvN~I~PG~i~T~~~~~~ 208 (260)
T d1h5qa_ 157 -------------------SLNG--SLTQVFYNSSKAACSNLVKGLAAEWASA----GIRVNALSPGYVNTDQTAHM 208 (260)
T ss_dssp -------------------ETTE--ECSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCGGGGGS
T ss_pred -------------------cccc--CccccchhhhhhhHHHHHHHHHHHhchh----CeEEeecCCCcccCcchhcc
Confidence 0000 0113689999999999999999999999 99999999999999997654
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=8.3e-18 Score=128.77 Aligned_cols=102 Identities=17% Similarity=0.209 Sum_probs=84.3
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC----CccEEEecCCcc-cccccccHHHHhhhhcccc
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR----HARVVNLSSSAG-HLSQITNLELKKRLMEDCV 68 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~----~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~ 68 (153)
|||||.... .++|++.+++|+.|++++++.++|.|++ +|+||++||..+ ...|.
T Consensus 94 VnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~-------------- 159 (257)
T d1xg5a_ 94 INNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL-------------- 159 (257)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC--------------
T ss_pred EecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC--------------
Confidence 689987532 3889999999999999999999999853 589999999887 33222
Q ss_pred ChHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHh--ccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 69 SERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKF--DCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~--~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
.....|+++|+++.+|+|+|+.|+ .+. ||+||+|+||+++|++....
T Consensus 160 ---------------------------~~~~~Y~~sKaal~~ltr~la~el~~~~~----~I~vn~i~PG~i~t~~~~~~ 208 (257)
T d1xg5a_ 160 ---------------------------SVTHFYSATKYAVTALTEGLRQELREAQT----HIRATCISPGVVETQFAFKL 208 (257)
T ss_dssp ---------------------------GGGHHHHHHHHHHHHHHHHHHHHHHHTTC----CCEEEEEEESCBCSSHHHHH
T ss_pred ---------------------------cccHHHHHHHHHHHhCHHHHHHHHHhCCC----CEEEEEEeCCCCCChhhhhc
Confidence 013579999999999999999998 455 89999999999999987544
Q ss_pred C
Q psy16223 147 G 147 (153)
Q Consensus 147 ~ 147 (153)
.
T Consensus 209 ~ 209 (257)
T d1xg5a_ 209 H 209 (257)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=2.5e-17 Score=125.05 Aligned_cols=89 Identities=13% Similarity=0.051 Sum_probs=80.1
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPR 89 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
+.|...+++|+.+.+.+++.+.|.|++++.|+++||..+ ...+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~----------------------------------- 154 (258)
T d1qsga_ 110 EGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN----------------------------------- 154 (258)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-----------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCC-----------------------------------
Confidence 568999999999999999999999999899999999877 44332
Q ss_pred ccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 90 AHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 90 ~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|++||+|+..|+|+++.||.++ |||||+|+||+|+|+|....
T Consensus 155 --------~~~Y~~sKaal~~ltr~lA~el~~~----gIrVN~I~PG~i~T~~~~~~ 199 (258)
T d1qsga_ 155 --------YNVMGLAKASLEANVRYMANAMGPE----GVRVNAISAGPIRTLAASGI 199 (258)
T ss_dssp --------TTHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCCCCTTGGGS
T ss_pred --------cHHHHHHHHHHHHHHHHHHHHhCcc----Cceeeccccccccccccccc
Confidence 4789999999999999999999998 99999999999999998754
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.68 E-value=4e-17 Score=122.20 Aligned_cols=90 Identities=23% Similarity=0.170 Sum_probs=78.6
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhhhc------C--CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHH
Q psy16223 10 AIQAEKTILTNYLGLVRTCVFLFPLLR------R--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEF 80 (153)
Q Consensus 10 ~~~~~~~~~vN~~g~~~l~~~~lp~l~------~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
.+.|++++++|+.+++.+++.+.+.+. + .|+||++||..+ .+.+.
T Consensus 90 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~-------------------------- 143 (241)
T d1uaya_ 90 LESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG-------------------------- 143 (241)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT--------------------------
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCC--------------------------
Confidence 478999999999999999999988742 2 489999999988 54433
Q ss_pred HHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 81 MDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
...|+++|+|+..|+|+|+.||.++ |||||+|+||+|+|+|....
T Consensus 144 -----------------~~~Y~asKaal~~lt~~lA~ela~~----gIrVN~V~PG~i~T~~~~~~ 188 (241)
T d1uaya_ 144 -----------------QAAYAASKGGVVALTLPAARELAGW----GIRVVTVAPGLFDTPLLQGL 188 (241)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSCSSHHHHTS
T ss_pred -----------------chhhHHHHHHHHHHHHHHHHHHhhc----CCceeeecCCcccccccchh
Confidence 4789999999999999999999999 99999999999999987544
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.63 E-value=3.3e-16 Score=121.10 Aligned_cols=100 Identities=14% Similarity=0.043 Sum_probs=77.6
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCcc-cccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAG-HLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||||.... .++|+.++.+|+.+.+.+++...+.+.. ++.+++++|..+ ...+.
T Consensus 108 vnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~--------------- 172 (294)
T d1w6ua_ 108 INNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF--------------- 172 (294)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT---------------
T ss_pred hhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccc---------------
Confidence 588887533 2679999999999999999888776632 467888888776 33222
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFMG 147 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~~ 147 (153)
..+|+++|+|+..|+|.++.|+.++ |||||+|+||+|+|++.....
T Consensus 173 ----------------------------~~~YsasKaal~~ltk~lA~ela~~----gIrVN~I~PG~i~T~~~~~~~ 218 (294)
T d1w6ua_ 173 ----------------------------VVPSASAKAGVEAMSKSLAAEWGKY----GMRFNVIQPGPIKTKGAFSRL 218 (294)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCC------C
T ss_pred ----------------------------cchHHHHHHHHHHHHHHHHHHHhHh----CeEEEEEccCccccchhhhcc
Confidence 4689999999999999999999999 999999999999999987653
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.63 E-value=4e-16 Score=120.25 Aligned_cols=101 Identities=11% Similarity=0.101 Sum_probs=83.8
Q ss_pred CCCCCCCc---------cHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChH
Q psy16223 1 MNRASTVP---------FAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 1 innag~~~---------~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|||||... ..++|++++++|+.+++.+++.++|.|.++++++.+++........
T Consensus 124 VnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------------- 186 (297)
T d1d7oa_ 124 VHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIP----------------- 186 (297)
T ss_dssp EECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT-----------------
T ss_pred ccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhccccc-----------------
Confidence 58898642 1278999999999999999999999999988888888776522111
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhc-cccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFD-CELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
.....|+++|+++..+++.++.++. +. |||||+|+||+|+|++.+..
T Consensus 187 ------------------------~~~~~y~~aKaa~~~l~~~~a~e~~~~~----gIrvN~I~PG~i~T~~~~~~ 234 (297)
T d1d7oa_ 187 ------------------------GYGGGMSSAKAALESDTRVLAFEAGRKQ----NIRVNTISAGPLGSRAAKAI 234 (297)
T ss_dssp ------------------------TCTTTHHHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCCBCCCSSCC
T ss_pred ------------------------ccccceecccccccccccccchhccccc----eEEecccccccccchhhhhc
Confidence 1146899999999999999999996 57 89999999999999998764
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.54 E-value=6.7e-15 Score=112.44 Aligned_cols=82 Identities=15% Similarity=0.079 Sum_probs=67.8
Q ss_pred HHHHHhhhhhHHHHHHHHHhhhh------cC--CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHHH
Q psy16223 13 AEKTILTNYLGLVRTCVFLFPLL------RR--HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMDI 83 (153)
Q Consensus 13 ~~~~~~vN~~g~~~l~~~~lp~l------~~--~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (153)
|...+.+|+.+++++++.+.+.+ .+ .++|++++|... .+.+.
T Consensus 136 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~~~----------------------------- 186 (284)
T d1e7wa_ 136 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLG----------------------------- 186 (284)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTT-----------------------------
T ss_pred HHHHHhhheeeeeeeeccccchhhhhHHHhcCCCCcccccccccccCCccc-----------------------------
Confidence 44689999999999999987754 22 368888888776 44322
Q ss_pred hhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 84 TKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 84 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
...|++||+|++.|+|+|+.||.++ ||+||+|+||++.|.
T Consensus 187 --------------~~~Y~asKaal~~lt~~lA~el~~~----gIrvN~I~PG~t~~~ 226 (284)
T d1e7wa_ 187 --------------YTIYTMAKGALEGLTRSAALELAPL----QIRVNGVGPGLSVLV 226 (284)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBCCG
T ss_pred --------------eeeeccccccchhhhHHHHHHhCCc----ccccccccccccccc
Confidence 4789999999999999999999999 999999999986543
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.50 E-value=4.6e-14 Score=106.61 Aligned_cols=87 Identities=18% Similarity=0.074 Sum_probs=72.4
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcC-------CccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHHHHHHH
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRR-------HARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMMYEFMD 82 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~-------~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (153)
+.+...+.+|+.+++.+.+...+.+.. .+.+++++|..+ ...+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------- 168 (266)
T d1mxha_ 117 AQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPG---------------------------- 168 (266)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSCCTT----------------------------
T ss_pred cccccccccccccccchhhhhccccccccccccccccchhhhhccccccCcc----------------------------
Confidence 457788999999999999998887743 357778888776 43332
Q ss_pred HhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCC
Q psy16223 83 ITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSS 144 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~ 144 (153)
...|++||+++++++|+++.++.++ |||||+|+||+|+|++..
T Consensus 169 ---------------~~~Y~asKaal~~lt~~lA~e~~~~----gIrVN~I~PG~i~t~~~~ 211 (266)
T d1mxha_ 169 ---------------FCVYTMAKHALGGLTRAAALELAPR----HIRVNAVAPGLSLLPPAM 211 (266)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBSCCSSS
T ss_pred ---------------hhhhhhhHHHHhhhHHHHHHHhCcc----CcEEEEeccCcEeccccC
Confidence 4789999999999999999999999 999999999999998764
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.47 E-value=4e-14 Score=107.35 Aligned_cols=86 Identities=14% Similarity=0.120 Sum_probs=73.1
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
++|.+.+++|..+.+...+...+.+.+++.|+.+++......+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~------------------------------------ 156 (268)
T d2h7ma1 113 ADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPA------------------------------------ 156 (268)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTT------------------------------------
T ss_pred hhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcc------------------------------------
Confidence 67899999999999999999999887766666655544343332
Q ss_pred cccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCC
Q psy16223 91 HVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMS 143 (153)
Q Consensus 91 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~ 143 (153)
...|+++|+++.+|+|+++.||.++ ||+||+|+||+|+|++.
T Consensus 157 -------~~~y~~sK~a~~~ltr~lA~e~~~~----gIrVN~V~PG~v~T~~~ 198 (268)
T d2h7ma1 157 -------YNWMTVAKSALESVNRFVAREAGKY----GVRSNLVAAGPIRTLAM 198 (268)
T ss_dssp -------THHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCHHH
T ss_pred -------cchhhccccchhhccccchhhhhcc----CCcceEEecCCCCChhh
Confidence 4689999999999999999999999 99999999999999875
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.46 E-value=2.8e-15 Score=113.11 Aligned_cols=127 Identities=20% Similarity=0.152 Sum_probs=76.1
Q ss_pred CCCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCC--ccEEEecCCcc-cccccccHHHHhhhhccccChHHHHHHH
Q psy16223 1 MNRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRH--ARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQLTDMM 77 (153)
Q Consensus 1 innag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~--g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (153)
|||||..+..+.+.....+|+.+...+.+..++.+... ..+.++++... .............-... .+
T Consensus 67 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---------~~ 137 (257)
T d1fjha_ 67 VLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGE---------EA 137 (257)
T ss_dssp EECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTC---------HH
T ss_pred EEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCc---------EE
Confidence 47899887778899999999999999999999988653 45666666543 21111000000000000 00
Q ss_pred HHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 78 YEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
.......... ... ...+|++||+|+..|+|+|+.||.++ |||||+|+||+|+|+|.+..
T Consensus 138 --~i~s~~~~~~--~~~--~~~~Y~asKaal~~ltr~lA~el~~~----gIrVN~I~PG~i~T~~~~~~ 196 (257)
T d1fjha_ 138 --KARAIVEHAG--EQG--GNLAYAGSKNALTVAVRKRAAAWGEA----GVRLNTIAPGATETPLLQAG 196 (257)
T ss_dssp --HHHHHHHTCC--TTH--HHHHHHHHHHHHHHHHHHTHHHHHHT----TCEEEEEEECC---------
T ss_pred --EEeeehhccC--CCc--chHHHHHHhhhhhccccccccccccc----cccccccccCCcCChhHHhh
Confidence 0000000000 000 02469999999999999999999999 99999999999999998654
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.41 E-value=2.6e-13 Score=103.24 Aligned_cols=100 Identities=18% Similarity=0.137 Sum_probs=75.3
Q ss_pred CCCCCCCccH-----------HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccC
Q psy16223 1 MNRASTVPFA-----------IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVS 69 (153)
Q Consensus 1 innag~~~~~-----------~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~ 69 (153)
|||+|..+.. +.+...+.++..+.+.+.+.+.+.++.++.|+++++.......
T Consensus 88 V~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~---------------- 151 (274)
T d2pd4a1 88 VHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM---------------- 151 (274)
T ss_dssp EECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----------------
T ss_pred EeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc----------------
Confidence 4777765322 3455666666667777777777776666777777776653221
Q ss_pred hHHHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCCCCCC
Q psy16223 70 ERQLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNMSSFM 146 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~~~~~ 146 (153)
.....|+++|+++.+++|+++.|+.++ |||||+|+||+++|+|....
T Consensus 152 --------------------------~~~~~y~asK~al~~ltr~lA~e~~~~----GIrvN~I~PG~v~T~~~~~~ 198 (274)
T d2pd4a1 152 --------------------------AHYNVMGLAKAALESAVRYLAVDLGKH----HIRVNALSAGPIRTLASSGI 198 (274)
T ss_dssp --------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCTTGGGS
T ss_pred --------------------------ccchhhhHHHHHHHHHHHhhHHHhcCc----CceecccccCcccCcccccc
Confidence 114689999999999999999999998 99999999999999987654
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.17 E-value=1.7e-11 Score=92.46 Aligned_cols=88 Identities=18% Similarity=0.038 Sum_probs=67.3
Q ss_pred CCCCCCCcc-------HHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcc-cccccccHHHHhhhhccccChHH
Q psy16223 1 MNRASTVPF-------AIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAG-HLSQITNLELKKRLMEDCVSERQ 72 (153)
Q Consensus 1 innag~~~~-------~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~ 72 (153)
|||+|.... .++|+.++++|+.|++.+.+.+.+ .+.++||++||..+ .+.+.
T Consensus 94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~--~~~~~iv~~SS~a~~~g~~~------------------ 153 (259)
T d2fr1a1 94 FHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE--LDLTAFVLFSSFASAFGAPG------------------ 153 (259)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT--SCCSEEEEEEEHHHHTCCTT------------------
T ss_pred ccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc--cCCceEeeecchhhccCCcc------------------
Confidence 477877532 277999999999999998886544 24589999999988 55433
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 73 LTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
...|+++|+++..|++.++ .. |+++++|+||.+.+.
T Consensus 154 -------------------------~~~YaAaka~l~~la~~~~----~~----Gi~v~~I~pg~~~~~ 189 (259)
T d2fr1a1 154 -------------------------LGGYAPGNAYLDGLAQQRR----SD----GLPATAVAWGTWAGS 189 (259)
T ss_dssp -------------------------CTTTHHHHHHHHHHHHHHH----HT----TCCCEEEEECCBC--
T ss_pred -------------------------cHHHHHHHHhHHHHHHHHH----hC----CCCEEECCCCcccCC
Confidence 4789999999987766554 45 899999999987544
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=97.12 E-value=0.0013 Score=50.19 Aligned_cols=94 Identities=18% Similarity=0.037 Sum_probs=62.5
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhh-cCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLL-RRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPR 89 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l-~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
++.+..+++|+.|+..++.++...- ++..|+|++||....+.+... .+.|
T Consensus 96 ~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~----------~~~E------------------- 146 (357)
T d1db3a_ 96 ESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEI----------PQKE------------------- 146 (357)
T ss_dssp SCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSS----------SBCT-------------------
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCC----------CcCC-------------------
Confidence 4567789999999999988875432 344689999986533211100 0111
Q ss_pred ccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 90 AHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 90 ~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
.....+...|+.||.+.+.+++..++.+ |+.+..+.|+.+-.|.
T Consensus 147 --~~~~~P~~~Y~~sK~~~E~~~~~~~~~~-------~l~~~ilR~~~vyGp~ 190 (357)
T d1db3a_ 147 --TTPFYPRSPYAVAKLYAYWITVNYRESY-------GMYACNGILFNHESPR 190 (357)
T ss_dssp --TSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECCEECTT
T ss_pred --CCCCCCCChHHHHHHHHHHHHHHHHHHh-------CCCEEEEEeccccCCC
Confidence 0111234789999999999999888765 5777788887666653
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.94 E-value=0.0016 Score=48.77 Aligned_cols=104 Identities=19% Similarity=0.056 Sum_probs=65.4
Q ss_pred CCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHH
Q psy16223 2 NRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 2 nnag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
|.|+..... ++.++.+++|+.|+..+++++... +.++|++||....+.+... ...++.
T Consensus 71 hlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~---~~k~I~~SS~~vy~~~~~~----------~~~e~~------ 131 (312)
T d2b69a1 71 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV---GARLLLASTSEVYGDPEVH----------PQSEDY------ 131 (312)
T ss_dssp ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEEEGGGGBSCSSS----------SBCTTC------
T ss_pred ECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc---CCcEEEEEChheecCCCCC----------CCCccc------
Confidence 556654322 345678999999999998875432 3589999986543221100 000000
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
-.......+...|+.||.+.+.+++..+++. |+.+..+.|+.|--+
T Consensus 132 ----------~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~lR~~~vyGp 177 (312)
T d2b69a1 132 ----------WGHVNPIGPRACYDEGKRVAETMCYAYMKQE-------GVEVRVARIFNTFGP 177 (312)
T ss_dssp ----------CCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECCEECT
T ss_pred ----------cCCCCCCCCccHHHHHHHHHHHHHHHHHHHh-------CCcEEEEEeeeEECC
Confidence 0000111235789999999999999888775 688888889887654
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=96.65 E-value=0.0016 Score=49.22 Aligned_cols=121 Identities=17% Similarity=0.104 Sum_probs=65.2
Q ss_pred CCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhh-hccccChHHHHHHHHHHH
Q psy16223 3 RASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRL-MEDCVSERQLTDMMYEFM 81 (153)
Q Consensus 3 nag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 81 (153)
+++...........+.+|+.|+..+.+.+... ..-.++|++||......+. + ...... .........+..... +
T Consensus 90 ~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~~~i~~SS~~~~~~~~-~-~~~~~~~~e~~~~~~~~~~~~~-~- 164 (342)
T d1y1pa1 90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPK-P-NVEGIYLDEKSWNLESIDKAKT-L- 164 (342)
T ss_dssp CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCC-T-TCCCCEECTTCCCHHHHHHHHH-S-
T ss_pred hcccccccccccccccchhhhHHHHHHhhhcc-cccccccccccceeeccCC-C-CCCCcccccccccccccccccc-c-
Confidence 34443333445677889999999888876553 1225889999865421110 0 000000 001011111111000 0
Q ss_pred HHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 82 DITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
. . .....+...|+.+|.+.+.+++.+.++... ++.+..|+|+.+--+
T Consensus 165 --~----e--~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-----~~~~~~i~p~~v~Gp 211 (342)
T d1y1pa1 165 --P----E--SDPQKSLWVYAASKTEAELAAWKFMDENKP-----HFTLNAVLPNYTIGT 211 (342)
T ss_dssp --C----T--TSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-----SSEEEEEEESEEECC
T ss_pred --c----c--cCCCCCcCcccchhHhHHHHHHHhhhhccc-----ccccceecccceeCC
Confidence 0 0 000001357999999999999988877654 588889999877544
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=96.62 E-value=0.0065 Score=44.81 Aligned_cols=96 Identities=15% Similarity=0.075 Sum_probs=60.1
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCcc
Q psy16223 12 QAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRAH 91 (153)
Q Consensus 12 ~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
.....+++|+.|+..++.++... .-.++|++||....+.... .+..|+. ...
T Consensus 74 ~~~~~~~~Nv~gt~~ll~~a~~~--~v~~~i~~SS~~vyg~~~~----------~~~~E~~----------------~~~ 125 (315)
T d1e6ua_ 74 YPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSCIYPKLAK----------QPMAESE----------------LLQ 125 (315)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGSCTTCC----------SSBCGGG----------------TTS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECCceEcCCCCC----------CCccCCc----------------ccc
Confidence 45567889999999888776432 1247999999775332110 0011110 000
Q ss_pred ccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 92 VAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 92 ~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
....++...|+.||.+.+.+++.+.++. |+.+..+.|+.|--|.
T Consensus 126 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------gl~~~ilR~~~vyGp~ 169 (315)
T d1e6ua_ 126 GTLEPTNEPYAIAKIAGIKLCESYNRQY-------GRDYRSVMPTNLYGPH 169 (315)
T ss_dssp SCCCGGGHHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEESTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHh-------CCCEEEEeeccEECCC
Confidence 0011123579999999999999887765 6889999998776543
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=96.37 E-value=0.0078 Score=44.74 Aligned_cols=91 Identities=21% Similarity=0.127 Sum_probs=62.1
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
...+..+++|..|+..+.+.+... .-.++|++||....+.... ..+ +
T Consensus 94 ~~~~~~~~~N~~gt~~ll~~~~~~--~~~~~I~~Ss~~~yg~~~~----------~~~---------------------~ 140 (322)
T d1r6da_ 94 AGASVFTETNVQGTQTLLQCAVDA--GVGRVVHVSTNQVYGSIDS----------GSW---------------------T 140 (322)
T ss_dssp HCCHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGCCCSS----------SCB---------------------C
T ss_pred cchHHHhhhhHHHHHHHHHHHHHc--CCceEEEeecceeecCCCC----------CCC---------------------C
Confidence 446678899999999998887532 1257999988765322110 000 1
Q ss_pred cccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 91 HVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 91 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
...+..+...|+.+|.+.+.+++.++++. |+.+..+.|+.|--+
T Consensus 141 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~lR~~~vyGp 184 (322)
T d1r6da_ 141 ESSPLEPNSPYAASKAGSDLVARAYHRTY-------GLDVRITRCCNNYGP 184 (322)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECEEECT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHh-------CCCEEEEEeeeEECc
Confidence 11122345789999999999999988765 688888888877654
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.35 E-value=0.014 Score=43.59 Aligned_cols=92 Identities=16% Similarity=0.079 Sum_probs=62.9
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
++....+++|+.|+..+.+.+... .-.++|++||....+.... +|.+
T Consensus 109 ~~~~~~~~~Nv~gt~~ll~~~~~~--~~~~~i~~SS~~vyg~~~~-------------------------------~~~~ 155 (341)
T d1sb8a_ 109 NDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDHPG-------------------------------LPKV 155 (341)
T ss_dssp HCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCC-------------------------------SSBC
T ss_pred cCccchhheeehhHHHHHHHHHhc--CCceEEEcccceeeCCCCC-------------------------------CCcc
Confidence 556789999999999998876542 2248999998765332110 0111
Q ss_pred cccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 91 HVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 91 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
......+...|+.+|.+.+.+++.+++.. ++++..+.|+.|-.+.
T Consensus 156 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~i~~~ilR~~~v~G~~ 200 (341)
T d1sb8a_ 156 EDTIGKPLSPYAVTKYVNELYADVFSRCY-------GFSTIGLRYFNVFGRR 200 (341)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCCEEEEECCEECTT
T ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHHHh-------CCCeEEEEeceeeccC
Confidence 11223345789999999999998887655 5777788888766543
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=96.25 E-value=0.012 Score=44.78 Aligned_cols=113 Identities=15% Similarity=0.054 Sum_probs=68.2
Q ss_pred CCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcC-------CccEEEecCCcccccccccHHHHhhhhccccChH
Q psy16223 2 NRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRR-------HARVVNLSSSAGHLSQITNLELKKRLMEDCVSER 71 (153)
Q Consensus 2 nnag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~-------~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (153)
|.|+..... ++..+++++|+.|+..+.+.+...-.. ..++|++||....+....... ........
T Consensus 79 hlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~-----~~~~~~~~ 153 (361)
T d1kewa_ 79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDE-----VENSVTLP 153 (361)
T ss_dssp ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGG-----SCTTSCCC
T ss_pred ECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCc-----cccccCCC
Confidence 555544322 345689999999999999887765432 248999999765321110000 00000000
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 72 QLTDMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
.........+...|+.||.+.+.+++..+... |+.+..+.|+.|--|.
T Consensus 154 ----------------~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~-------~i~~~~lR~~~vyGp~ 201 (361)
T d1kewa_ 154 ----------------LFTETTAYAPSSPYSASKASSDHLVRAWRRTY-------GLPTIVTNCSNNYGPY 201 (361)
T ss_dssp ----------------CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECEEESTT
T ss_pred ----------------CcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-------CCCEEEEecCceECcC
Confidence 00001112235779999999999999888765 6888888888776553
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.25 E-value=0.018 Score=42.85 Aligned_cols=93 Identities=13% Similarity=-0.047 Sum_probs=59.6
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhc-CCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLR-RHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPR 89 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~-~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
+.....+++|..|+..+..++...-. +..++|++||....+.+.. ....|+
T Consensus 97 ~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~----------~~~~E~------------------ 148 (347)
T d1t2aa_ 97 DLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQE----------IPQKET------------------ 148 (347)
T ss_dssp HSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSS----------SSBCTT------------------
T ss_pred ccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCC----------CCCCCC------------------
Confidence 44566789999999999888766543 3357999988654321110 001110
Q ss_pred ccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 90 AHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 90 ~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
.. ..+...|+.||.+.+.+++..++.. |+.+..+.|+.+.-+
T Consensus 149 -~~--~~P~~~Yg~sK~~aE~~~~~~~~~~-------~~~~~ilr~~~vyGp 190 (347)
T d1t2aa_ 149 -TP--FYPRSPYGAAKLYAYWIVVNFREAY-------NLFAVNGILFNHESP 190 (347)
T ss_dssp -SC--CCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECCEECT
T ss_pred -CC--CCCCCHHHHHHHHHHHHHHHHHHHh-------CCCEEEEEecceeCC
Confidence 11 1234789999999999988887664 567777777655443
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=96.22 E-value=0.026 Score=42.11 Aligned_cols=103 Identities=17% Similarity=-0.006 Sum_probs=65.8
Q ss_pred CCCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccc-cccccHHHHhhhhccccChHHHHHH
Q psy16223 1 MNRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHL-SQITNLELKKRLMEDCVSERQLTDM 76 (153)
Q Consensus 1 innag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (153)
||.|+..... +..+..+++|+.|+..+++++...= -.++|++||..... .+..
T Consensus 78 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~--v~~~i~~Ss~~vy~~~~~~--------------------- 134 (338)
T d1udca_ 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNFIFSSSATVYGDQPKI--------------------- 134 (338)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSCCSS---------------------
T ss_pred EECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC--CCEEEecCcceEEcccccc---------------------
Confidence 3566654322 3456899999999999988875531 24788888865422 1110
Q ss_pred HHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 77 MYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
.........++...|+.+|.+...+.+....+.. ++.+..+.|+.|-.+-
T Consensus 135 ----------~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~------~~~~~ilR~~~v~G~~ 184 (338)
T d1udca_ 135 ----------PYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP------DWSIALLRYFNPVGAH 184 (338)
T ss_dssp ----------SBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHST------TCEEEEEEECEEECCC
T ss_pred ----------ccccccccCCCcchHHHHHhhhhHHHHHHHhhcc------CCeEEEEeeccEEecc
Confidence 0011112234568899999999988887776643 5777778887766553
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.84 E-value=0.054 Score=40.33 Aligned_cols=104 Identities=11% Similarity=-0.099 Sum_probs=61.5
Q ss_pred CCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHH
Q psy16223 2 NRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 2 nnag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
|.|+..... +..+..+.+|+.|+..+.+.+...- -.++|++||....+.....+ ...+.
T Consensus 80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~--i~~~i~~SS~~vyg~~~~~~------~~~~~---------- 141 (347)
T d1z45a2 80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN--VSKFVFSSSATVYGDATRFP------NMIPI---------- 141 (347)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCCGGGST------TCCSB----------
T ss_pred EccccccccccccCcccccccchhhhHHHHHHHHhcc--cceEEeecceeeecCcccCC------CCCcc----------
Confidence 556654332 3446788999999999988874422 14799999976532111000 00000
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCccc
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVA 139 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~ 139 (153)
+......+...|+.||.+.+.+.+.+...... ++.+..+.|+.+-
T Consensus 142 -----------~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-----~~~~~~lR~~~v~ 186 (347)
T d1z45a2 142 -----------PEECPLGPTNPYGHTKYAIENILNDLYNSDKK-----SWKFAILRYFNPI 186 (347)
T ss_dssp -----------CTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTT-----SCEEEEEEECEEE
T ss_pred -----------ccccCCCCCChhHhHHHHHHHHHHHHHHhhcc-----CCcEEEEeecceE
Confidence 00111223468999999999998888765433 4666666665443
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=94.80 E-value=0.066 Score=39.82 Aligned_cols=101 Identities=12% Similarity=0.025 Sum_probs=58.8
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccc-cccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHL-SQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPR 89 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
.+.+..+++|+.|+..++...... +.+++++||....+ .+........ ..... .. -
T Consensus 91 ~~~~~~~~~N~~g~~nll~~~~~~---~~k~i~~ss~~vyg~~~~~~~~~~~-~~~~~-----------------~~--~ 147 (346)
T d1oc2a_ 91 NDPSPFIHTNFIGTYTLLEAARKY---DIRFHHVSTDEVYGDLPLREDLPGH-GEGPG-----------------EK--F 147 (346)
T ss_dssp HCCHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGGCCBCCGGGSTTT-TCSTT-----------------SS--B
T ss_pred hCcccceeeehHhHHhhhhhhccc---cccccccccceEecccCcccccccc-ccCcc-----------------cc--c
Confidence 345678999999999988765332 35777777765422 1110000000 00000 00 0
Q ss_pred ccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 90 AHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 90 ~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
+......+...|+.+|.+.+.+++...++. |+.+..+-|+.|--|
T Consensus 148 ~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~-------~i~~~ilR~~~vyGp 192 (346)
T d1oc2a_ 148 TAETNYNPSSPYSSTKAASDLIVKAWVRSF-------GVKATISNCSNNYGP 192 (346)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECCEEST
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHc-------CCCEEEEeecceeCC
Confidence 001111234679999999999998887765 688898988876543
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.20 E-value=0.12 Score=38.44 Aligned_cols=98 Identities=11% Similarity=-0.043 Sum_probs=60.2
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
+.....+.+|..++..++.++...= -.++|++||..........+ ....... ..
T Consensus 98 ~~~~~~~~~n~~gt~~ll~~~~~~~--vk~~i~~SS~~~~~~~~~~~-----~~~~~~~-------------------~~ 151 (363)
T d2c5aa1 98 SNHSVIMYNNTMISFNMIEAARING--IKRFFYASSACIYPEFKQLE-----TTNVSLK-------------------ES 151 (363)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEEEEGGGSCGGGSSS-----SSSCEEC-------------------GG
T ss_pred cccccccccccchhhHHHHhHHhhC--cccccccccccccccccccc-----ccccccc-------------------cc
Confidence 4567888999999988887754421 14799999876532211000 0000000 00
Q ss_pred cccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 91 HVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 91 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
...+..+...|+.+|.+.+.+++...++. |+.+..+.|+.+-.+
T Consensus 152 e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~-------gl~~~ilR~~~vyG~ 195 (363)
T d2c5aa1 152 DAWPAEPQDAFGLEKLATEELCKHYNKDF-------GIECRIGRFHNIYGP 195 (363)
T ss_dssp GGSSBCCSSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECCEECT
T ss_pred cCCcCCCCCHHHHHHHHHHHHHHHHHHHh-------CCCEEEEEeeeEecc
Confidence 00011234689999999999998887665 688888888877654
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.61 E-value=0.33 Score=36.35 Aligned_cols=104 Identities=13% Similarity=0.039 Sum_probs=56.5
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhh-hccccChHHHHHHHHHHHHHhhcCCC
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRL-MEDCVSERQLTDMMYEFMDITKEHPR 89 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
+.....+++|+.|+..+...+.. .....++++.||.........+.+..... ...... .
T Consensus 111 ~~~~~~~~~Nv~gt~nll~~~~~-~~~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~-------------------~ 170 (393)
T d1i24a_ 111 SRAVYTQHNNVIGTLNVLFAIKE-FGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRT-------------------D 170 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEE-------------------E
T ss_pred cccccccccccccccHHHHHHHH-hccccceeeccccccccccccccccccccccccccc-------------------c
Confidence 34567899999999998877542 22234566666654322111000000000 000000 0
Q ss_pred ccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 90 AHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 90 ~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
.......+...|+.||.+.+.+++..+.+. |+....+.|+.|--+
T Consensus 171 ~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~-------~l~~~~lR~~~v~G~ 215 (393)
T d1i24a_ 171 TLPYPKQASSFYHLSKVHDSHNIAFTCKAW-------GIRATDLNQGVVYGV 215 (393)
T ss_dssp EEECCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEECS
T ss_pred ccccccccccHHHHHhhhhccccccccccc-------ceeeeecccccccCC
Confidence 000111234679999999999998877765 577777777755443
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=93.05 E-value=0.24 Score=36.34 Aligned_cols=107 Identities=13% Similarity=-0.009 Sum_probs=62.0
Q ss_pred CCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHH
Q psy16223 2 NRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 2 nnag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
|.|+..... +.....+++|..|+..++..+.. .+-++++.||.......... .....
T Consensus 73 h~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~---~~~~~~~~ss~~~~~~~~~~-----~~~~~------------ 132 (342)
T d2blla1 73 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVK---YRKRIIFPSTSEVYGMCSDK-----YFDED------------ 132 (342)
T ss_dssp ECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHH---TTCEEEEECCGGGGBTCCCS-----SBCTT------------
T ss_pred cccccccccccccCCcccccccccccccccccccc---cccccccccccccccccccc-----ccccc------------
Confidence 556655333 33457899999999999888532 34566777665542211100 00000
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
.......+...+...|+.||.+.+.+.+...+.. |+.+..+.|..+-.+-
T Consensus 133 -------~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~i~r~~~~~g~~ 182 (342)
T d2blla1 133 -------HSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-------GLQFTLFRPFNWMGPR 182 (342)
T ss_dssp -------TCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECSEECSS
T ss_pred -------cccccccccCCCcchhhhcccchhhhhhhhhccc-------CceeEEeecccccccc
Confidence 0000011112234689999999999999888775 5777777777665543
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.06 E-value=0.59 Score=33.61 Aligned_cols=92 Identities=16% Similarity=0.065 Sum_probs=55.3
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHHHHHHHhhcCCCc
Q psy16223 11 IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMYEFMDITKEHPRA 90 (153)
Q Consensus 11 ~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (153)
+....++++|..|+..++..+... ....++++.||....+.... ....
T Consensus 90 ~~~~~~~~~n~~g~~~~l~~~~~~-~~~~~~i~~Ss~~~~~~~~~----------~~~~--------------------- 137 (321)
T d1rpna_ 90 NQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSEMFGLIQA----------ERQD--------------------- 137 (321)
T ss_dssp TSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCSCSS----------SSBC---------------------
T ss_pred cchHHHHhhhhhchHHHHHHHHHh-CCCcccccccchhhcCcccC----------CCCC---------------------
Confidence 345688999999999988765332 22245666666443221110 0000
Q ss_pred cccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 91 HVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 91 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
......+...|+.+|.+.+.+++..+.+. ++.+..+.|+-+.-|
T Consensus 138 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~lr~~~vyGp 181 (321)
T d1rpna_ 138 ENTPFYPRSPYGVAKLYGHWITVNYRESF-------GLHASSGILFNHESP 181 (321)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECCEECT
T ss_pred CCCCccccChhHHHHHHHHHHHHHHHhhc-------CCcEEEEEEecccCC
Confidence 01112235789999999999988888765 566677777654444
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=91.63 E-value=0.66 Score=33.58 Aligned_cols=101 Identities=17% Similarity=-0.006 Sum_probs=61.7
Q ss_pred CCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcC---CccEEEecCCccc-ccccccHHHHhhhhccccChHHHH
Q psy16223 2 NRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRR---HARVVNLSSSAGH-LSQITNLELKKRLMEDCVSERQLT 74 (153)
Q Consensus 2 nnag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~---~g~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 74 (153)
|.|+..... +.....+++|..|+..+...+...... ..++++.||.... ..+. ...
T Consensus 85 h~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~------------~~~----- 147 (339)
T d1n7ha_ 85 NLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP------------PQS----- 147 (339)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS------------SBC-----
T ss_pred hccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCC------------CCC-----
Confidence 556554433 445678899999999888776543322 2345555554322 1110 000
Q ss_pred HHHHHHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCCC
Q psy16223 75 DMMYEFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATNM 142 (153)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~~ 142 (153)
......+...|+.+|.+.+.+++...+.. |+.+..+.|+.|--|.
T Consensus 148 ----------------E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilR~~~vyGp~ 192 (339)
T d1n7ha_ 148 ----------------ETTPFHPRSPYAASKCAAHWYTVNYREAY-------GLFACNGILFNHESPR 192 (339)
T ss_dssp ----------------TTSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECCEECTT
T ss_pred ----------------CCCCCCCcchhhHHHHHHHHHHHHHHHHh-------CCCEEEEEEccccCCC
Confidence 01111235789999999999988877654 6888888887665543
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=91.55 E-value=0.21 Score=37.48 Aligned_cols=107 Identities=14% Similarity=0.034 Sum_probs=59.9
Q ss_pred CCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHH
Q psy16223 2 NRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 2 nnag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
|.|+..... +.....+++|..++..+.......-. .++++++|.............. ......
T Consensus 99 H~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~~---~~~~~~--------- 164 (383)
T d1gy8a_ 99 HMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKC--DKIIFSSSAAIFGNPTMGSVST---NAEPID--------- 164 (383)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC--CEEEEEEEGGGTBSCCC--------CCCCBC---------
T ss_pred cccccccccccccccccccccccccccccchhhhccCC--cccccccccccccccccccccc---cccccc---------
Confidence 455554332 34567889999999998877654322 3566655544321110000000 000000
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccCC
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVATN 141 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T~ 141 (153)
......+...|+.+|.+.+.+++.+.... |+.+..+.|+.+--+
T Consensus 165 ------------e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-------gl~~~~lR~~~vyG~ 208 (383)
T d1gy8a_ 165 ------------INAKKSPESPYGESKLIAERMIRDCAEAY-------GIKGICLRYFNACGA 208 (383)
T ss_dssp ------------TTSCCBCSSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEECC
T ss_pred ------------cccCCCCCCHHHhhHhHHHHHHHHHHHHh-------CCCEEEEecceeecc
Confidence 00111234789999999999998887664 678888888765443
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=90.50 E-value=0.0026 Score=44.63 Aligned_cols=35 Identities=3% Similarity=-0.340 Sum_probs=25.3
Q ss_pred CCCCCCC---ccHHHHHHHHhhhhhHHHHHHHHHhhhh
Q psy16223 1 MNRASTV---PFAIQAEKTILTNYLGLVRTCVFLFPLL 35 (153)
Q Consensus 1 innag~~---~~~~~~~~~~~vN~~g~~~l~~~~lp~l 35 (153)
|||||.. ...+.|+..+++|+++.+.....+.+.+
T Consensus 97 in~Ag~g~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~ 134 (191)
T d1luaa1 97 FTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIGG 134 (191)
T ss_dssp EECCCTTCCCBCHHHHHTCTTCCEEEECCCSSSCSBTT
T ss_pred eecCccccccCCHHHHHhhhcceeehhHhhHHHHHHHh
Confidence 5888864 2348899999999998887665544433
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.22 E-value=2 Score=31.16 Aligned_cols=101 Identities=11% Similarity=-0.117 Sum_probs=58.0
Q ss_pred CCCCCCccH---HHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCcccccccccHHHHhhhhccccChHHHHHHHH
Q psy16223 2 NRASTVPFA---IQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGHLSQITNLELKKRLMEDCVSERQLTDMMY 78 (153)
Q Consensus 2 nnag~~~~~---~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (153)
|.|+..... +.....+++|+.|+..+..++...= -.+++++||....+.....
T Consensus 87 h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~--v~~~i~~ss~~~~~~~~~~---------------------- 142 (346)
T d1ek6a_ 87 HFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG--VKNLVFSSSATVYGNPQYL---------------------- 142 (346)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGGCSCSSS----------------------
T ss_pred ccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC--cccccccccceeeeccccc----------------------
Confidence 455544322 3356789999999998887753321 1368888776543221100
Q ss_pred HHHHHhhcCCCccccCCCCCchhHHhHHHHHHHHHHHHHHhccccCCCCeEEEEeeCCcccC
Q psy16223 79 EFMDITKEHPRAHVAKGWPDSAYAVSKIGVNLLTRIYQKKFDCELGNQDKVINAVHPGYVAT 140 (153)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~~gi~v~~v~PG~v~T 140 (153)
.+........+...|+.+|...+...+.+++... +.....+-|+.+-.
T Consensus 143 --------~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~~------~~~~~~lR~~~v~G 190 (346)
T d1ek6a_ 143 --------PLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADK------TWNAVLLRYFNPTG 190 (346)
T ss_dssp --------SBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCT------TCEEEEEEECEEEC
T ss_pred --------cccccccccccCChHHHHHHHHHHHHHHHHHhcc------CCceEEEeecceec
Confidence 0011111122346899999999988887765432 46666666655443
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.55 E-value=1.5 Score=30.21 Aligned_cols=47 Identities=13% Similarity=-0.083 Sum_probs=32.5
Q ss_pred CCCCCCccHHHHHHHHhhhhhHHHHHHHHHhhhhcCCccEEEecCCccc
Q psy16223 2 NRASTVPFAIQAEKTILTNYLGLVRTCVFLFPLLRRHARVVNLSSSAGH 50 (153)
Q Consensus 2 nnag~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~g~iv~~sS~~~~ 50 (153)
|++|............++|+.++..+++.+... .-.++|++|+....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~--~v~~fi~~Ss~~~~ 132 (232)
T d2bkaa1 86 CCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG--GCKHFNLLSSKGAD 132 (232)
T ss_dssp ECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCC
T ss_pred ccccccccccchhhhhhhcccccceeeeccccc--CccccccCCccccc
Confidence 566666555566777889999988888776331 12478999987653
|