Psyllid ID: psy16243
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 782 | 2.2.26 [Sep-21-2011] | |||||||
| A1ZAI5 | 625 | Putative fatty acyl-CoA r | no | N/A | 0.474 | 0.593 | 0.343 | 2e-69 | |
| Q7ZXF5 | 515 | Fatty acyl-CoA reductase | N/A | N/A | 0.497 | 0.755 | 0.335 | 2e-69 | |
| Q922J9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.497 | 0.755 | 0.319 | 2e-64 | |
| Q0P5J1 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.466 | 0.708 | 0.339 | 6e-64 | |
| Q8WVX9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.497 | 0.755 | 0.314 | 9e-64 | |
| Q7TNT2 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.506 | 0.768 | 0.330 | 1e-63 | |
| Q5R834 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.497 | 0.755 | 0.312 | 3e-63 | |
| Q96K12 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.534 | 0.811 | 0.313 | 1e-62 | |
| Q5ZM72 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.475 | 0.722 | 0.317 | 6e-62 | |
| Q66H50 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.487 | 0.739 | 0.324 | 4e-60 |
| >sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 264 bits (675), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/411 (34%), Positives = 223/411 (54%), Gaps = 40/411 (9%)
Query: 238 EMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF 297
E+ F+ +R+ P LSK++ ++GD +GI+ +D+ L N+ VVFH AATV+F
Sbjct: 173 ELLNAPLFESLRQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKF 232
Query: 298 DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHL 357
D LK++V+IN+ TK L+E+ M L + +HVSTAY NC + + E Y PP NP+ +
Sbjct: 233 DEKLKLSVTINMLGTKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDI 292
Query: 358 IQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNK 417
I + L +D++D++TP ++ PNTY TK +AE M+ + +PVA+VRPSIV A+
Sbjct: 293 ISLINWLPEDILDQLTPRLIGKRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLN 352
Query: 418 EPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVP 477
EP GW ++N GPTG+V+ G+ R+M + VADMVP
Sbjct: 353 EPFAGW--------------------VDNFNGPTGLVSALAKGMFRTMMCEKNYVADMVP 392
Query: 478 ADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKE 537
D VIN +I+AAW + A K ++ IYN + + PI W E
Sbjct: 393 VDIVINLMIAAAW--------RTATRK------------SNNLLIYNCCTGQRNPIIWSE 432
Query: 538 FMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLHLLPALIVDTAAKLMGRQPKL 597
F+ +V + P +W L + ++ L + H LPA I+D A++MG++P +
Sbjct: 433 FVKHAMTSVRKHPLEGCLWYPTGDLRMNRPMNTLNCIAKHFLPAYILDGVARIMGKKPFV 492
Query: 598 LDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQL 648
++ KI K E + +F+T+Q+ F + N L ++ +DR +F FD+ +
Sbjct: 493 VNVQNKIAKAVECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHI 543
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Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols. Drosophila melanogaster (taxid: 7227) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2 |
| >sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 233/429 (54%), Gaps = 40/429 (9%)
Query: 220 VAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQ 279
V V + +A + E EM K FD +R P K++A++ + +P + ++ ED+
Sbjct: 40 VYVLVRHKAGQKPRERVAEMMSCKLFDKLRDEQPDCAQKVIAISSELTQPELDMSKEDQD 99
Query: 280 TLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCR 339
TL+D I +VFHCAATVRF+ L+ A+ +N+ AT+ LL +A++MK+L+ F+HVSTAY+NC
Sbjct: 100 TLIDCIDIVFHCAATVRFNESLRDAMQLNVIATRQLLYLAQKMKKLEVFIHVSTAYANCN 159
Query: 340 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG 399
+ IEE Y PPV+P LI+ E ++D +++ ITP ++ PNTY TK +AE +V++ G
Sbjct: 160 RKQIEEVVYPPPVDPKKLIESLEWMDDSLVNDITPKLIGDRPNTYTYTKALAEYVVQQEG 219
Query: 400 AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGL 459
+ + +A+VRPSIV A+ KEP PG WI+N GP+G+ AG
Sbjct: 220 SKLNIAIVRPSIVGASWKEPFPG--------------------WIDNFNGPSGLFIAAGK 259
Query: 460 GLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTD 519
G+LR+M A VAD++P D V+N ++AAW + N K +
Sbjct: 260 GILRTMRASNNAVADLIPVDVVVNTTLAAAW--YSGVNRPK------------------N 299
Query: 520 IEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLHLL 579
+ +YN + P W E P A L ++ +I H
Sbjct: 300 MLVYNCTTGGTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKA 359
Query: 580 PALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRA 639
PAL+ D ++ GR P+++ ++H+ ++ +F++ + + N NT L ++++ ED+
Sbjct: 360 PALLYDVYLRITGRSPRMMKTITRLHRAMMLLEYFTSNSWVWNNENTNMLMSQLSPEDKK 419
Query: 640 LFNFDMSQL 648
+FNFD+ QL
Sbjct: 420 VFNFDVRQL 428
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Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Xenopus laevis (taxid: 8355) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/429 (31%), Positives = 226/429 (52%), Gaps = 40/429 (9%)
Query: 220 VAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQ 279
V V + +A + E +E+ K FD +R P + K++A+ + +P + ++ ED++
Sbjct: 40 VYVLVRQKAGQTPQERVEEILSSKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKE 99
Query: 280 TLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCR 339
++D+ +V+FHCAATVRF+ +L+ AV +N+ AT+ L+ +A++MK L+ F+HVSTAY+ C
Sbjct: 100 IIIDSTNVIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCN 159
Query: 340 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG 399
+ I+E Y PPV+P LI E ++D +++ ITP ++ PNTY TK +AE +V++ G
Sbjct: 160 RKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEG 219
Query: 400 AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGL 459
A + VA+VRPSIV A+ KEP PG WI+N GP+G+ AG
Sbjct: 220 AKLNVAIVRPSIVGASWKEPFPG--------------------WIDNFNGPSGLFIAAGK 259
Query: 460 GLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTD 519
G+LR+M A +AD+VP D V+N ++AAW + N + +
Sbjct: 260 GILRTMRASNNALADLVPVDVVVNTSLAAAW--YSGVNRPR------------------N 299
Query: 520 IEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLHLL 579
I +YN + + P W E P A L ++ +I H
Sbjct: 300 IMVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKA 359
Query: 580 PALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRA 639
PA + D ++ GR P+++ ++HK + +F++ + + N L ++ ED+
Sbjct: 360 PAFLYDIYLRMTGRSPRMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKK 419
Query: 640 LFNFDMSQL 648
FN D+ QL
Sbjct: 420 TFNIDVRQL 428
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Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 246 bits (627), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 227/415 (54%), Gaps = 50/415 (12%)
Query: 243 KFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLK 302
K F+ +++ CP+ K+ A++ D + I+ ED + L+ + +++FHCAATVRFD HL+
Sbjct: 63 KLFEKVKEVCPNVHEKIRAISADLNQNDFAISKEDMKELLSHTNIIFHCAATVRFDDHLR 122
Query: 303 VAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITE 362
AV +N+ AT+ LL MA +M +L++F+H+STA+SNC I+E Y PV P +I E
Sbjct: 123 HAVQLNVTATQQLLLMASQMPKLEAFIHISTAFSNCNLKHIDEVVYPCPVEPKKIIDSME 182
Query: 363 LLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPG 422
L+D +ID+ITP ++ WPNTY TK + E +V++ G + +A++RPSI+ AT
Sbjct: 183 WLDDAIIDEITPKLIGDWPNTYTYTKALGEVVVQQEGGNLNIAIIRPSIMGAT------- 235
Query: 423 WINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVI 482
W +EP PGW++N GP+G++ AG G LRS+ A P VAD++PAD V+
Sbjct: 236 W-------------QEPFPGWVDNLNGPSGLIIAAGKGFLRSIRATPMAVADLIPADTVV 282
Query: 483 NCIISAAW--NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMA 540
N ++ W VH+ P T +Y+ S P W + M
Sbjct: 283 NLTLAVGWYTAVHR--------------------PKST--LVYHCTSGNLNPCNWGK-MG 319
Query: 541 LNEKAVPE-IP--STFAIWAYCFTLNKYKSIHKLYILFLHLLPALIVDTAAKLMGRQPKL 597
L A E IP F FT N + + + H PA+I D +L GR+P++
Sbjct: 320 LQVLATFEKIPFERAFRRPNADFTTNNITTHY--WNAVSHRAPAIIYDFYLRLTGRKPRM 377
Query: 598 LDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQLGSFE 652
++ + ++ +F + + ++ +NT+ L ++++ ED+ +FNFD+ QL E
Sbjct: 378 TKLMNRLLRTLSMLEYFVNRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLE 432
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Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 245 bits (626), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 135/429 (31%), Positives = 226/429 (52%), Gaps = 40/429 (9%)
Query: 220 VAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQ 279
V V + +A + E +E+ K FD +R P + K++A+ + +P + ++ ED++
Sbjct: 40 VYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKE 99
Query: 280 TLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCR 339
++D+ +++FHCAATVRF+ +L+ AV +N+ AT+ L+ +A++MK L+ F+HVSTAY+ C
Sbjct: 100 VIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCN 159
Query: 340 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG 399
+ I+E Y PPV+P LI E ++D +++ ITP ++ PNTY TK +AE +V++ G
Sbjct: 160 RKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEG 219
Query: 400 AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGL 459
A + VA+VRPSIV A+ KEP PG WI+N GP+G+ AG
Sbjct: 220 AKLNVAIVRPSIVGASWKEPFPG--------------------WIDNFNGPSGLFIAAGK 259
Query: 460 GLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTD 519
G+LR++ A +AD+VP D V+N ++AAW + N + +
Sbjct: 260 GILRTIRASNNALADLVPVDVVVNMSLAAAW--YSGVNRPR------------------N 299
Query: 520 IEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLHLL 579
I +YN + + P W E P A L ++ +I H
Sbjct: 300 IMVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKA 359
Query: 580 PALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRA 639
PA + D ++ GR P+++ ++HK + +F++ + + N L ++ ED+
Sbjct: 360 PAFLYDIYLRMTGRSPRMMKTITRLHKAMVFLEYFTSNSWVWNTENVNMLMNQLNPEDKK 419
Query: 640 LFNFDMSQL 648
FN D+ QL
Sbjct: 420 TFNIDVRQL 428
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Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 237/445 (53%), Gaps = 49/445 (11%)
Query: 213 RFDAHLKVA-VSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGV 271
R HLKV + + ++ + L E ++ K F+ +++ CP+ K+ ++ D +
Sbjct: 32 RTSPHLKVIYILVRPKSGQTLQERVFQILNSKLFEKVKEVCPNVHEKIRPISADLNQRDF 91
Query: 272 GINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHV 331
I+ ED Q L+ +++FHCAATVRFDAHL+ AV +N+ AT+ LL MA +M +L++F+H+
Sbjct: 92 AISKEDVQELLSCTNIIFHCAATVRFDAHLREAVQLNVTATQQLLLMASQMPKLEAFIHI 151
Query: 332 STAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391
STA+SNC I+E Y PV P +I E L+D +I++ITP ++ PNTY TK +
Sbjct: 152 STAFSNCNLSHIDEVIYPCPVEPRKIIDSMEWLDDSIIEEITPKLIGDRPNTYTYTKALG 211
Query: 392 EDMVRRGGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPT 451
E +V++ + VA+VRPSIV AT +EP PGW++N +N GP+
Sbjct: 212 EIVVQQESGNLNVAIVRPSIVGATWQEPFPGWVDN-----------------LN---GPS 251
Query: 452 GIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAW--NVHQTWNEKKAAGKLVADS 509
G++ G G LRS+ A P VAD++P D V+N I+ W VH+
Sbjct: 252 GLIIATGKGFLRSIKATPMAVADVIPVDTVVNLTIAVGWYTAVHR--------------- 296
Query: 510 LDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP--STFAIWAYCFTLNKYKS 567
P T IY+ S P W + + +IP S F FT + + +
Sbjct: 297 -----PKST--LIYHSTSGNLNPCNWYKMGLQVLATIEKIPFESAFRRPNADFTTSNFTT 349
Query: 568 IHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQ 627
+ + H +PA+I D +L GR+P++L ++ K ++ +F + ++ NT+
Sbjct: 350 HY--WNTVSHRVPAIIYDFYLRLTGRKPRMLKLMNRLLKTISMLEYFINHSWEWSTNNTE 407
Query: 628 RLYTKMTEEDRALFNFDMSQLGSFE 652
L ++++ ED+ +FNFD+ QL E
Sbjct: 408 MLLSELSPEDQRVFNFDVRQLNWLE 432
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Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/429 (31%), Positives = 226/429 (52%), Gaps = 40/429 (9%)
Query: 220 VAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQ 279
V V + +A + E +E+ K FD +R P + K++A+ + +P + ++ ED++
Sbjct: 40 VYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKE 99
Query: 280 TLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCR 339
++++ +++FHCAATVRF+ +L+ AV +N+ AT+ L+ +A++MK L+ F+HVSTAY+ C
Sbjct: 100 VIIESTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCN 159
Query: 340 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG 399
+ I+E Y PPV+P LI E ++D +++ ITP ++ PNTY TK +AE +V++ G
Sbjct: 160 RKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEG 219
Query: 400 AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGL 459
A + VA+VRPSIV A+ KEP PG WI+N GP+G+ AG
Sbjct: 220 AKLNVAIVRPSIVGASWKEPFPG--------------------WIDNFNGPSGLFIAAGK 259
Query: 460 GLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTD 519
G+LR++ A +AD+VP D V+N ++AAW + N + +
Sbjct: 260 GILRTIRASNNALADLVPVDVVVNMSLAAAW--YSGVNRPR------------------N 299
Query: 520 IEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLHLL 579
I +YN + + P W E P A L ++ +I H
Sbjct: 300 IMVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKA 359
Query: 580 PALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRA 639
PA + D ++ GR P+++ ++HK + +F++ + + N L ++ ED+
Sbjct: 360 PAFLYDIYLRMTGRSPRMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKK 419
Query: 640 LFNFDMSQL 648
FN D+ QL
Sbjct: 420 TFNIDVRQL 428
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 243/475 (51%), Gaps = 57/475 (12%)
Query: 227 RATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIH 286
+A + L + ++ K F+ +++ CP+ K+ A+ D + I+ ED Q L+ +
Sbjct: 47 KAGQTLQQRVFQILDSKLFEKVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTN 106
Query: 287 VVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEER 346
++FHCAATVRFD L+ AV +N+ AT+ LL MA +M +L++F+H+STAYSNC I+E
Sbjct: 107 IIFHCAATVRFDDTLRHAVQLNVTATRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEV 166
Query: 347 FYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAM 406
Y PV P +I E L+D +ID+ITP ++ WPN Y TK + E +V++ + +A+
Sbjct: 167 IYPCPVEPKKIIDSLEWLDDAIIDEITPKLIRDWPNIYTYTKALGEMVVQQESRNLNIAI 226
Query: 407 VRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMH 466
+RPSIV AT +EP PGW++N IN GP GI+ G G LR++
Sbjct: 227 IRPSIVGATWQEPFPGWVDN-----------------IN---GPNGIIIATGKGFLRAIK 266
Query: 467 ADPELVADMVPADNVINCIISAAW--NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYN 524
A P VAD++P D V+N +++ W VH+ P T +Y+
Sbjct: 267 ATPMAVADVIPVDTVVNLMLAVGWYTAVHR--------------------PKST--LVYH 304
Query: 525 YVSSTQKPIKWK----EFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLHLLP 580
S P W + +A EK E P F FT N + S + + H P
Sbjct: 305 ITSGNMNPCNWHKMGVQVLATFEKIPFERP--FRRPNANFTSNSFTS--QYWNAVSHRAP 360
Query: 581 ALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRAL 640
A+I D +L GR+P++ ++ + ++ +F + + ++ +NT+ L ++++ ED+ +
Sbjct: 361 AIIYDCYLRLTGRKPRMTKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRV 420
Query: 641 FNFDMSQLGSFE-----VHSTLNTLVSTRSLKLLDAYQKIHKFSEVISFFSTQQF 690
FNFD+ QL E V L+ + A Q++ + + F+T F
Sbjct: 421 FNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPKAKQRLKRLRNIHYLFNTALF 475
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 239 bits (610), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 131/412 (31%), Positives = 217/412 (52%), Gaps = 40/412 (9%)
Query: 237 KEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVR 296
+E+ K FD +R+ P + K++ +T + +P + +++ ++ L++ I+++FHCAATVR
Sbjct: 57 EEITSCKLFDRLREEQPDFKEKIIVITSELTQPELDLSNPVKEKLIECINIIFHCAATVR 116
Query: 297 FDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNH 356
F+ L+ AV +N+ +TK LL +A++M L+ F+HVSTAY+ C + IEE Y PPV+P
Sbjct: 117 FNETLRDAVQLNVLSTKQLLSLAQQMTNLEVFMHVSTAYAYCNRKHIEEVVYPPPVDPKK 176
Query: 357 LIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATN 416
L+ E ++D +++ ITP ++ PNTY TK +AE +V++ GA + A++RPSIV A+
Sbjct: 177 LMDSLEWMDDSLVNDITPKLIGDRPNTYTYTKALAEYVVQQEGARLNTAIIRPSIVGASW 236
Query: 417 KEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMV 476
KEP PG WI+N GP+G+ AG G+LR+M A VAD+V
Sbjct: 237 KEPFPG--------------------WIDNFNGPSGLFIAAGKGILRTMRASNGAVADLV 276
Query: 477 PADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWK 536
P D V+N ++AAW + N + +I +YN + P W
Sbjct: 277 PVDVVVNMTLAAAW--YSGVNRPR------------------NIMVYNCTTGGTNPFHWS 316
Query: 537 EFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLHLLPALIVDTAAKLMGRQPK 596
E P A L ++ +I H PA + D ++ GR P+
Sbjct: 317 EVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRITGRSPR 376
Query: 597 LLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQL 648
++ ++HK + +F++ + + N L +++ ED+ FNFD+ QL
Sbjct: 377 MMKTITRLHKAMVFLEYFTSNSWIWNTENMTMLMNQLSPEDKKTFNFDVRQL 428
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 233 bits (595), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/437 (32%), Positives = 238/437 (54%), Gaps = 56/437 (12%)
Query: 220 VAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQ 279
V V + +A + E +E+ K FD +R P + K++A+ + +P + ++ ED++
Sbjct: 40 VYVLVRQKAGQTPQERVEEILSGKLFDRLRDENPDFRQKIIAINSELTQPKLALSEEDKE 99
Query: 280 TLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCR 339
++D+ +V+FHCAATVRF+ +L+ AV +N+ AT+ L+ +A++MK L+ F+HVSTAY+ C
Sbjct: 100 IIIDSTNVIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCN 159
Query: 340 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG 399
+ I+E Y PPV+P LI E ++D +++ ITP ++ PNTY TK +AE +V++ G
Sbjct: 160 RKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEG 219
Query: 400 AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGL 459
A + VA+VRPSIV A+ KEP PG WI+N GP+G+ AG
Sbjct: 220 AKLNVAIVRPSIVGASWKEPFPG--------------------WIDNFNGPSGLFIAAGK 259
Query: 460 GLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTD 519
G+LR+M A +AD+VP D V+N ++AAW +G N P +
Sbjct: 260 GILRTMRASNNALADLVPVDVVVNTSLAAAW----------YSG--------VNRP--RN 299
Query: 520 IEIYNYVSSTQKPIKWKE---FMALNEKAVPEIPSTF-----AIWAYCFTLNKYKSIHKL 571
I +YN + + P W E ++ + K P + F ++ L+ +K +
Sbjct: 300 IMVYNCTTGSTNPFHWGEVGDYLNHSFKTNP-LNQVFRHPYVKFYSNNLMLHYWKGVK-- 356
Query: 572 YILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYT 631
H +PAL++D A +L G++P ++ ++HK + +F++ + + N L
Sbjct: 357 -----HTVPALLLDLALRLTGQKPWMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMN 411
Query: 632 KMTEEDRALFNFDMSQL 648
++ ED+ FN D+ QL
Sbjct: 412 QLNPEDKKTFNIDVRQL 428
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 782 | ||||||
| 328706692 | 548 | PREDICTED: putative fatty acyl-CoA reduc | 0.520 | 0.742 | 0.430 | 1e-102 | |
| 328722094 | 522 | PREDICTED: putative fatty acyl-CoA reduc | 0.521 | 0.781 | 0.415 | 1e-101 | |
| 158300988 | 528 | AGAP011736-PA [Anopheles gambiae str. PE | 0.492 | 0.729 | 0.424 | 1e-99 | |
| 328724139 | 522 | PREDICTED: putative fatty acyl-CoA reduc | 0.521 | 0.781 | 0.408 | 2e-99 | |
| 328706694 | 532 | PREDICTED: putative fatty acyl-CoA reduc | 0.519 | 0.763 | 0.424 | 7e-99 | |
| 157114336 | 530 | hypothetical protein AaeL_AAEL006774 [Ae | 0.492 | 0.726 | 0.417 | 1e-98 | |
| 350425305 | 533 | PREDICTED: putative fatty acyl-CoA reduc | 0.515 | 0.756 | 0.436 | 9e-98 | |
| 340723120 | 533 | PREDICTED: putative fatty acyl-CoA reduc | 0.512 | 0.752 | 0.434 | 1e-97 | |
| 156541926 | 545 | PREDICTED: putative fatty acyl-CoA reduc | 0.485 | 0.697 | 0.462 | 1e-97 | |
| 170067375 | 564 | conserved hypothetical protein [Culex qu | 0.5 | 0.693 | 0.409 | 2e-97 |
| >gi|328706692|ref|XP_001948318.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/432 (43%), Positives = 278/432 (64%), Gaps = 25/432 (5%)
Query: 219 KVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDR 278
K+ V I + K E KE+ F+ M+K P+YL K+ AV GDC P +GI + R
Sbjct: 60 KIYVLIREKKGKTTEERFKELFDDPVFELMKKEQPNYLEKITAVIGDCCLPNLGIQEQYR 119
Query: 279 QTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNC 338
+ + +++V H AATVRFD HL+ AV+IN+ A + +L+M++ M+ LK+FVH+STAYSNC
Sbjct: 120 TIMKNEVNIVIHSAATVRFDEHLRKAVNINIIALQDMLKMSQGMRDLKAFVHISTAYSNC 179
Query: 339 R-QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397
+ +++E FY+PP++ ++L Q+ L+DD IDKITP ++ WPNTYA+TK +AE +
Sbjct: 180 AGRKVVDEMFYKPPISGDNLFQLVNSLDDDYIDKITPSLLKEWPNTYAMTKAIAEGEIAE 239
Query: 398 GGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGA 457
G G+P+ ++RPS+++AT+ EP+ GWINN YGPTG+VA
Sbjct: 240 YGKGLPIGVIRPSMIVATDNEPVQ--------------------GWINNIYGPTGVVAAT 279
Query: 458 GLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAG-KLVADSLDKNYPD 516
G+GL+R M ADP+ +AD+VP D V N ++++AW++H W E K + ++ + L K +
Sbjct: 280 GVGLMRCMCADPDQIADIVPGDFVSNAVVASAWDIHNQWKEHKNSNCEVEVNGLKK---E 336
Query: 517 DTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFL 576
IYN VSS+ P+ W EF A N+ PS AIW + L+K K + + L
Sbjct: 337 QFVPPIYNVVSSSSNPLTWGEFSAFNKNYGCHTPSVKAIWPFMLRLSKNKYEYTILCFLL 396
Query: 577 HLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEE 636
H LPALI+D+ AKL GR+P+LLD Y+K+HKFSEVI++F+ Q +TF + NT+ L K+++
Sbjct: 397 HTLPALIIDSLAKLTGRKPQLLDGYKKMHKFSEVIAYFALQSWTFHDNNTKSLIKKLSKL 456
Query: 637 DRALFNFDMSQL 648
DR LF FD+++L
Sbjct: 457 DRPLFRFDVTKL 468
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328722094|ref|XP_001947250.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/431 (41%), Positives = 281/431 (65%), Gaps = 23/431 (5%)
Query: 219 KVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDR 278
++ + I + K + E KE+ F+ M+K P++L K+ AV GDC P +GI +
Sbjct: 52 RIYILIREKKGKTIEERFKELFDDPVFELMKKEQPNFLEKITAVIGDCALPNMGIEEKYI 111
Query: 279 QTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNC 338
+ D +++V H AATVRFD HL++AV+IN+ A + +L++++ +K LK+FVH+STAYSNC
Sbjct: 112 NIIKDEVNIVIHSAATVRFDEHLRIAVNINIIALQDILKISQNIKNLKAFVHISTAYSNC 171
Query: 339 R-QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397
+ +++E FY+PP+ + L+Q+ L+D+ I +ITP ++ WPNTYA+TK +AE +
Sbjct: 172 AGREVVDEIFYKPPITGDKLLQVVNSLDDEYITRITPSLLGEWPNTYAMTKAIAEGEIMT 231
Query: 398 GGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGA 457
G G+P+ ++RPS++IAT+ EP+ PGWINN YGPTG+VA
Sbjct: 232 YGKGLPIGVIRPSMIIATDNEPV--------------------PGWINNFYGPTGVVAAT 271
Query: 458 GLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDD 517
G+GL+R M+AD AD+VP D V N +++ AW++H W E+ A+ ++ D+L+K
Sbjct: 272 GIGLMRCMNADSTKTADIVPGDYVSNAVLACAWDIHNKWKEQNASNEMKVDNLEKETL-- 329
Query: 518 TDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLH 577
D IYN+VSS+ P+ W EF ALN+K E+PS AI L+K K +++ LH
Sbjct: 330 IDPPIYNFVSSSANPLTWGEFSALNKKYGCEVPSVKAISPILLRLSKNKYEYQILCFILH 389
Query: 578 LLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEED 637
++PA I+D+ AKL G++P L++ Y+K+HKFSEVIS+FS + +TF + NT+ L K+++ D
Sbjct: 390 IIPAFIIDSLAKLTGKKPLLMEGYRKMHKFSEVISYFSLKSWTFNDNNTRSLVQKLSKLD 449
Query: 638 RALFNFDMSQL 648
+ LF FD+++L
Sbjct: 450 QTLFRFDLTKL 460
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|158300988|ref|XP_320774.4| AGAP011736-PA [Anopheles gambiae str. PEST] gi|157013424|gb|EAA00047.4| AGAP011736-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 178/419 (42%), Positives = 259/419 (61%), Gaps = 34/419 (8%)
Query: 230 KALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVF 289
K + +E+ FD M++ CP Y K+ AV GDC++PG+GI+S DR+ L +N+++VF
Sbjct: 82 KDIFSRVEEIFDDAMFDKMKQACPKYDHKIRAVAGDCMQPGLGISSSDREVLTENVNIVF 141
Query: 290 HCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYE 349
H AATVRFD +K A+ IN++A + +L++ +MK LKS ++VSTAY+ C Q +++ERFYE
Sbjct: 142 HLAATVRFDEKMKTAMQINVKACRDVLDLCHDMKHLKSVIYVSTAYTQCPQSVVDERFYE 201
Query: 350 PPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRP 409
PP+ +I +T+ + D MI+KITP ++D WPNTY TK +AED+VR+ GMPV M RP
Sbjct: 202 PPLESEKMIHLTDCVTDGMIEKITPVLLDKWPNTYTFTKAIAEDVVRKNSRGMPVGMFRP 261
Query: 410 SIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADP 469
IVIAT +EP+PGWI+N YGPTG++AGAG G+LR++ ADP
Sbjct: 262 GIVIATYQEPVPGWIDN--------------------FYGPTGVIAGAGTGVLRTLRADP 301
Query: 470 ELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSST 529
VA+MVP D +N IIS+AW+ +A+ D +I IYN+ +
Sbjct: 302 TKVANMVPVDLCVNGIISSAWD--------------IAERFRTEILPDPEIPIYNFCTEP 347
Query: 530 QKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLHLLPALIVDTAAK 589
I W +F K P+ AIW C+ N +H L I+FLH PA++ D A
Sbjct: 348 NNCITWGDFTHTTIKFGSMYPTMKAIWYLCYASNPNIVLHYLSIIFLHYAPAVVCDIIAV 407
Query: 590 LMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQL 648
L+GR+P+LL +Y+KIH+F +VI +FS +++ F N L+ K++ D+ LF FDM Q+
Sbjct: 408 LIGRKPRLLRSYKKIHRFMDVIEYFSMREWEFKMDNMNGLWRKLSSADQKLFFFDMRQI 466
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328724139|ref|XP_003248040.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/431 (40%), Positives = 278/431 (64%), Gaps = 23/431 (5%)
Query: 219 KVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDR 278
++ + I + K E KE+ F+ M+K P++L K+ AV GDC P +GI +
Sbjct: 52 RIYILIREKKGKTTEERFKELFDDPVFELMKKEQPNFLEKITAVIGDCALPNMGIEEKYI 111
Query: 279 QTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNC 338
+ D +++V H AATVRFD HL++AV+IN+ A + +L++++ +K LK+FVH+STAYSNC
Sbjct: 112 NIIKDEVNIVIHSAATVRFDEHLRIAVNINIIALQDILKISQNIKNLKAFVHISTAYSNC 171
Query: 339 R-QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397
+ +++E FY+PP+ + L+Q+ L+D+ + +ITP ++ WPNTYA+TK +AE +
Sbjct: 172 AGREVVDEIFYKPPITGDKLLQVVNGLDDEYVTRITPSLLGEWPNTYAMTKAIAEGEIMT 231
Query: 398 GGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGA 457
G G+P+ ++RPS++IAT+ EP+ PGWINN YGPTG+VA
Sbjct: 232 YGKGLPIGVIRPSMIIATDNEPV--------------------PGWINNFYGPTGVVAAT 271
Query: 458 GLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDD 517
G+GL+R M+AD AD+VP D V N +++ AW++H W E+ A+ ++ D+L+K
Sbjct: 272 GIGLMRCMNADSTKTADIVPGDYVSNAVLACAWDIHNQWKERNASNEMKVDNLEKETL-- 329
Query: 518 TDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLH 577
D IYN+VSS P+ W EF ALN+K E+P AI L+K K +++ LH
Sbjct: 330 IDPPIYNFVSSRANPLTWGEFSALNKKYGREVPPLKAISPILLRLSKNKHEYQILCFILH 389
Query: 578 LLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEED 637
++PA I+D+ AKL G++P L++ Y+K+HKFS+VIS+FS + +TF + NT+ L K+++ D
Sbjct: 390 IIPAFIIDSLAKLTGKKPLLMEGYRKMHKFSKVISYFSLKSWTFNDDNTRSLVQKLSKLD 449
Query: 638 RALFNFDMSQL 648
+ LF FD+++L
Sbjct: 450 QTLFRFDLTKL 460
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328706694|ref|XP_003243174.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 183/431 (42%), Positives = 273/431 (63%), Gaps = 25/431 (5%)
Query: 220 VAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQ 279
+ V I + K E KE+ F+ M+K P+YL K+ AV GDC P +GI +
Sbjct: 63 IYVLIREKKGKTTEERFKELFNDPVFELMKKEQPNYLEKVTAVIGDCCLPNLGIQEQYID 122
Query: 280 TLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCR 339
+ D +++V H AATVRFD HL+ AV+IN+ A + +L++++ M+ LK+FVH+STAYSNC
Sbjct: 123 IIKDEVNIVIHSAATVRFDEHLRKAVNINIVALQDMLKISQGMRDLKAFVHISTAYSNCA 182
Query: 340 -QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398
+ +++E FY+PP++ ++L Q+ L+DD I +ITP ++ WPNTYA+TK +AE +
Sbjct: 183 GRKVVDEVFYKPPISGDNLFQLMNSLDDDYITRITPSMLKDWPNTYAMTKAIAEGEITTH 242
Query: 399 GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAG 458
G G+P+ +VRPS+++AT+ EP+ PGWINN YGPTG+ A G
Sbjct: 243 GKGLPIGVVRPSMIVATDSEPV--------------------PGWINNIYGPTGVCAATG 282
Query: 459 LGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAG-KLVADSLDKNYPDD 517
+GL+R M AD +L+AD+VP D V N ++++AW++H W E K + ++ AD L+K +
Sbjct: 283 IGLMRCMLADSDLMADIVPGDFVSNAVVASAWDIHNQWKEHKNSNCEVEADGLNK---EQ 339
Query: 518 TDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLH 577
IYN VSS P+ W EF N+K IPS AIW + L K + LH
Sbjct: 340 FVPPIYNVVSSRSNPLTWGEFSVFNKKYGCHIPSVKAIWPFMLRLTKNHYEFTILCFLLH 399
Query: 578 LLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEED 637
LPA I+D+ AKL GR+P+L+D Y+KIHKF EVI++F+ Q +TF + NT+ L K+++ D
Sbjct: 400 TLPAYIIDSLAKLTGRKPQLIDGYKKIHKFIEVIAYFALQSWTFHDNNTKSLIKKLSKLD 459
Query: 638 RALFNFDMSQL 648
++LF FDM++L
Sbjct: 460 QSLFKFDMNKL 470
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157114336|ref|XP_001658050.1| hypothetical protein AaeL_AAEL006774 [Aedes aegypti] gi|108877391|gb|EAT41616.1| AAEL006774-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 175/419 (41%), Positives = 256/419 (61%), Gaps = 34/419 (8%)
Query: 230 KALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVF 289
K + +E+ FD M+ CP Y K+ A+ GDC+ P +GI+ DR+ LV+N+++VF
Sbjct: 84 KDIFSRVEEIFDDAMFDKMKVACPKYDHKIRAIAGDCMLPNLGISPSDREVLVENVNIVF 143
Query: 290 HCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYE 349
H AATVRFD +K A+ IN++A + +L++ EMK LKS ++VSTAY+ C Q +++ERFYE
Sbjct: 144 HLAATVRFDEKMKTAMQINVKACRDILDLCYEMKHLKSVIYVSTAYTQCPQKVVDERFYE 203
Query: 350 PPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRP 409
PP++ +I +T+ ++D M++ ITP ++D WPNTY TK +AED+VR+ GMP+ M RP
Sbjct: 204 PPIDSKKMISLTDCVSDTMMENITPILLDKWPNTYTFTKAIAEDVVRQNSRGMPIGMFRP 263
Query: 410 SIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADP 469
IVIAT +EP+PGWI+N YGPTG++AGAG G+LR++ ADP
Sbjct: 264 GIVIATYQEPVPGWIDN--------------------FYGPTGVIAGAGTGVLRTLRADP 303
Query: 470 ELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSST 529
VA+MVP D +N IISAAW+ +A+ D DI +YN+ +
Sbjct: 304 TKVANMVPVDLCVNGIISAAWD--------------IAERFRTEIMPDPDIPVYNFCTER 349
Query: 530 QKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLHLLPALIVDTAAK 589
I W +F K P+ +IW C+T N K +H L ILFLH PA+ D A
Sbjct: 350 SNCITWGDFTYTTIKFGSMYPTLKSIWYLCYTSNPNKVLHYLSILFLHYAPAIFFDVIAL 409
Query: 590 LMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQL 648
+GR+P+L+ Y+KIH+F +VI +FS +Q+ F N L+ K++ D+ +F FDM Q+
Sbjct: 410 FIGRKPRLMRTYKKIHRFMDVIEYFSMRQWEFKMDNINALWRKLSRADQKVFFFDMRQI 468
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350425305|ref|XP_003494079.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 364 bits (935), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 188/431 (43%), Positives = 268/431 (62%), Gaps = 28/431 (6%)
Query: 218 LKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSED 277
L++ + + + K E KE + +D +R P++L K+V + GD K G++ ED
Sbjct: 62 LRLYMIVRPKKGKTAFERYKESFEEVIYDKLRCEQPNFLQKIVILEGDAAKEDYGLSPED 121
Query: 278 RQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSN 337
++TL+ N++++FH AA VRFD ++VAV+IN+R+TK LL AK++ K+FVHVSTA+SN
Sbjct: 122 KKTLM-NVNIIFHAAAVVRFDEKIRVAVNINVRSTKFLLSFAKKLPNFKAFVHVSTAFSN 180
Query: 338 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397
C + I+E Y ++ + ++ + + L+D ++K+TP ++D WPNTY TK + E+MV +
Sbjct: 181 CVRKNIDEVHYTDIIDADKVLTLLDTLDDGRLEKMTPILLDKWPNTYVFTKALGENMVLK 240
Query: 398 GGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGA 457
G +PV +VRPSIVIAT KEPI WIN N YGPTG+V G+
Sbjct: 241 YGGDLPVCIVRPSIVIATYKEPISAWIN--------------------NMYGPTGVVMGS 280
Query: 458 GLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDD 517
G+GLL ++H E +AD++PAD VI+ IIS+AW+V N K A + N PD+
Sbjct: 281 GIGLLHTLHCKKENIADIIPADYVISNIISSAWDVA---NRKVA----IKSDQSSNLPDE 333
Query: 518 TDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLH 577
I +YN VSS QKPI W EFM LNE +PST IW Y TLN+Y +H +Y LH
Sbjct: 334 EKIPVYNSVSSCQKPISWGEFMKLNEIYGLIVPSTKVIWVYRLTLNRYLFLHNIYAFLLH 393
Query: 578 LLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEED 637
++PA+IVDT A L GR P LLDAY+KIHKFS VI +F+ ++ F N N +L+ KM D
Sbjct: 394 IIPAIIVDTMAYLTGRTPILLDAYRKIHKFSTVIHYFAVNEWKFKNDNVIKLWNKMNSAD 453
Query: 638 RALFNFDMSQL 648
R +F + L
Sbjct: 454 RQIFCLNTEYL 464
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340723120|ref|XP_003399944.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 272/433 (62%), Gaps = 32/433 (7%)
Query: 218 LKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSED 277
L++ + + + K LE KE + +D +R P++L K+V + GD K G++ ED
Sbjct: 62 LRLYMIVRPKKGKTALERYKESFEEVIYDKLRCEQPNFLQKVVILEGDAAKEDYGLSPED 121
Query: 278 RQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSN 337
++TL+ N++++FH AA VRFD ++VAV+IN+R+TK LL AK++ K+FVHVSTA+SN
Sbjct: 122 KKTLM-NVNIIFHAAAVVRFDEKIRVAVNINVRSTKFLLSFAKKLPNFKAFVHVSTAFSN 180
Query: 338 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397
C + I+E Y ++ + ++ + + L+D ++++TP ++D WPNTY TK + E++V +
Sbjct: 181 CVRKHIDEVHYTDVIDADKVLTLLDTLDDGRLEQMTPMLLDKWPNTYVFTKALGENVVLK 240
Query: 398 GGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGA 457
G G+PV +VRPSIVIAT KEPI WIN N YGPTG+V G+
Sbjct: 241 YGDGLPVCIVRPSIVIATYKEPISAWIN--------------------NMYGPTGVVMGS 280
Query: 458 GLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDK--NYP 515
G+GLL ++H E +AD++PAD VI+ IIS+AW+V A + VA D+ N P
Sbjct: 281 GIGLLHTLHCKEENIADIIPADYVISNIISSAWDV---------ANRKVAIKSDQFSNLP 331
Query: 516 DDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILF 575
D+ I +YN VSS QKPI W EFM LNE +PST IW Y TLN+Y +H +Y
Sbjct: 332 DEEKIPVYNSVSSCQKPISWGEFMKLNEIYGLIVPSTKVIWVYTLTLNRYLFLHNIYTFL 391
Query: 576 LHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTE 635
LH++PA+I DT A L GR P LLDAY+KIHKFS VI +F+ ++ F N N +L+ KM
Sbjct: 392 LHIIPAIIGDTLAHLTGRTPILLDAYKKIHKFSTVIHYFAVNEWKFKNDNVIKLWNKMNS 451
Query: 636 EDRALFNFDMSQL 648
DR +F ++ L
Sbjct: 452 TDRQIFCLNVEYL 464
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156541926|ref|XP_001600309.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/404 (46%), Positives = 262/404 (64%), Gaps = 24/404 (5%)
Query: 245 FDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVA 304
+D ++K P++ +V + GD +G++ DR+ L++NI VVFH AATVRFD L+ A
Sbjct: 96 YDRLKKEQPNFSDHVVMIEGDISLGDLGLSKSDREELIENIDVVFHGAATVRFDESLRQA 155
Query: 305 VSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELL 364
V+IN+R TK +L A+EMK LK+FVH+STA+S+C IEE+FYEPP++P+ ++ + ++L
Sbjct: 156 VNINVRGTKLVLMFAREMKNLKAFVHISTAFSHCILKKIEEKFYEPPMDPDRVLSLVDML 215
Query: 365 NDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPGWI 424
+DD++D +TP ++ WPNTYA +K V E++VR+ G+P +VRPSI+IAT KEP+ GWI
Sbjct: 216 DDDLLDHMTPKVIGKWPNTYAFSKAVGEELVRKYSVGVPTCIVRPSIMIATYKEPVTGWI 275
Query: 425 NNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINC 484
NN +YGPTG+V GA +GLLRS+H + +AD++PAD VIN
Sbjct: 276 NN--------------------YYGPTGVVMGAAIGLLRSLHCESTKIADIIPADYVINN 315
Query: 485 IISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEK 544
II AAW+ +TW EK+ D +K P+D IYN VSS Q+PI W FM LNE
Sbjct: 316 IIVAAWDTAKTWEEKQKELAEKEDGPEK--PEDP--LIYNSVSSCQRPINWGTFMHLNEV 371
Query: 545 AVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKI 604
E+PS +W Y F LN++ +H L + H++P IVD A L GR P LL AY+KI
Sbjct: 372 YGREVPSALVLWHYSFMLNRHLWVHNLCVYLFHMVPGAIVDVLALLTGRDPILLKAYKKI 431
Query: 605 HKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQL 648
HKFS VIS+FSTQQ+ F N N L+ + DR F+F++ L
Sbjct: 432 HKFSGVISYFSTQQWEFNNKNVLELWERTPPADRKKFDFNLESL 475
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170067375|ref|XP_001868455.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167863531|gb|EDS26914.1| conserved hypothetical protein [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 174/425 (40%), Positives = 258/425 (60%), Gaps = 34/425 (8%)
Query: 224 INLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD 283
I + K + +E+ + F+ M++ CP Y K+ A+ GDC P +GI S DR+TLV+
Sbjct: 112 IRSKRGKDIFSRVEEIFEDAMFNKMKQACPKYDHKIRAIAGDCTLPSLGIGSSDRETLVE 171
Query: 284 NIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPII 343
N+++VFH AATVRFD +K A+ IN++A + +L++ EMK LKS ++VSTAY+ C Q +
Sbjct: 172 NVNIVFHLAATVRFDEKMKTAMQINVKACRDILDLCYEMKHLKSVIYVSTAYTQCPQKEV 231
Query: 344 EERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMP 403
EERFYEPP++ +I +T+ ++D M++ ITP ++D WPNTY TK +AED+VR+ GMP
Sbjct: 232 EERFYEPPLDSKKMIALTDCVSDSMMENITPILLDKWPNTYTFTKAIAEDVVRQNSRGMP 291
Query: 404 VAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLR 463
+ M RP IVIAT +EP+PGWI+N YGPTG++AGAG G+LR
Sbjct: 292 IGMFRPGIVIATYQEPVPGWIDN--------------------FYGPTGVIAGAGTGVLR 331
Query: 464 SMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIY 523
++ ADP VA+MVP D +N +ISAAW+ +A+ D +I +Y
Sbjct: 332 TLRADPTKVANMVPVDLCVNGMISAAWD--------------IAERFQTEIMPDPEIPVY 377
Query: 524 NYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLHLLPALI 583
N+ + I W +F K P+ ++W C+ N + +H L ILFLH LPA+
Sbjct: 378 NFCTERSNCITWGDFTYTTIKFGSMYPTVKSVWYLCYRSNPNRIMHFLAILFLHYLPAIF 437
Query: 584 VDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNF 643
D A +GR+P+L+ Y+KIH+F VI +FS +Q+ F N L+ +++ D+ LF F
Sbjct: 438 FDVIALFIGRKPRLMRTYKKIHRFMAVIEYFSMRQWDFKMENMNALWRRLSNADQKLFFF 497
Query: 644 DMSQL 648
DM Q+
Sbjct: 498 DMRQI 502
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 782 | ||||||
| FB|FBgn0039620 | 517 | CG1443 [Drosophila melanogaste | 0.237 | 0.359 | 0.419 | 1e-74 | |
| ZFIN|ZDB-GENE-060503-367 | 515 | si:dkey-97m3.1 "si:dkey-97m3.1 | 0.276 | 0.419 | 0.422 | 1.1e-73 | |
| FB|FBgn0038032 | 502 | CG10096 [Drosophila melanogast | 0.241 | 0.376 | 0.408 | 5.3e-67 | |
| FB|FBgn0038451 | 510 | CG14893 [Drosophila melanogast | 0.237 | 0.364 | 0.462 | 1.9e-66 | |
| FB|FBgn0038450 | 499 | CG17560 [Drosophila melanogast | 0.241 | 0.378 | 0.413 | 4.1e-65 | |
| UNIPROTKB|F1NTE5 | 456 | FAR2 "Uncharacterized protein" | 0.244 | 0.418 | 0.408 | 9.3e-64 | |
| FB|FBgn0038449 | 499 | CG17562 [Drosophila melanogast | 0.241 | 0.378 | 0.429 | 1e-63 | |
| ZFIN|ZDB-GENE-040426-2908 | 464 | far1 "fatty acyl CoA reductase | 0.276 | 0.465 | 0.414 | 1.8e-63 | |
| FB|FBgn0034145 | 625 | CG5065 [Drosophila melanogaste | 0.248 | 0.310 | 0.422 | 2.7e-63 | |
| UNIPROTKB|E1C6H7 | 511 | FAR2 "Uncharacterized protein" | 0.272 | 0.416 | 0.383 | 1.2e-61 |
| FB|FBgn0039620 CG1443 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 456 (165.6 bits), Expect = 1.0e-74, Sum P(3) = 1.0e-74
Identities = 78/186 (41%), Positives = 133/186 (71%)
Query: 245 FDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVA 304
F M++ P Y ++ ++GDC PG+GI++++R+T+++N+++V H AATVRFD LK+A
Sbjct: 92 FAKMKQVNPKYRCQITIISGDCSLPGLGISADERETIMENVNIVLHSAATVRFDEKLKMA 151
Query: 305 VSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELL 364
++IN+ TK ++++AKE+ LK+ VHVSTA+++C I+ERFY ++ + +++E L
Sbjct: 152 IAINVHGTKEIIKLAKEIVNLKALVHVSTAFAHCNMRHIQERFYSGTMSGENAFKLSECL 211
Query: 365 NDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPGWI 424
++ ++ +TP I+ +PNTY TK +AE++V++ +PV + RP IVI T +EP+ GWI
Sbjct: 212 DEHTLNTLTPTIIKGYPNTYTFTKVLAENVVQQSAQNLPVTIFRPGIVITTYREPVTGWI 271
Query: 425 NNHYGP 430
+N YGP
Sbjct: 272 DNMYGP 277
|
|
| ZFIN|ZDB-GENE-060503-367 si:dkey-97m3.1 "si:dkey-97m3.1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 501 (181.4 bits), Expect = 1.1e-73, Sum P(3) = 1.1e-73
Identities = 92/218 (42%), Positives = 150/218 (68%)
Query: 222 VSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTL 281
+ + +A +++ E ++M + K FD +R+ P + K++A++ + ++PG+ I+++D +TL
Sbjct: 42 ILVRPKAGQSMSERVQDMMKCKLFDRVREDNPEFHQKIIAISSELMQPGLAISAQDVETL 101
Query: 282 VDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQP 341
+H+VFHCAAT+RFD LK A+ +N+ AT+ LL +A++M+QL++F+H+STAY+NC +
Sbjct: 102 TSRVHIVFHCAATIRFDEPLKHALQLNVMATQQLLSLAQQMQQLQAFIHISTAYANCNRR 161
Query: 342 IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAG 401
I+E Y PPV P LI E +++ +I ITP ++ WPNTY TK +AE +V++ A
Sbjct: 162 HIDELIYPPPVEPRKLIDSLEWMDESIIRDITPRLIGDWPNTYTYTKALAECVVQQESAK 221
Query: 402 MPVAMVRPSIVIATNKEPIPGWINNHYGPT--VIATNK 437
+ V +VRPSIV A+ +EP PGWI+N GP+ IA K
Sbjct: 222 LNVGIVRPSIVGASWQEPFPGWIDNFNGPSGVFIAAGK 259
|
|
| FB|FBgn0038032 CG10096 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 445 (161.7 bits), Expect = 5.3e-67, Sum P(2) = 5.3e-67
Identities = 78/191 (40%), Positives = 129/191 (67%)
Query: 245 FDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVA 304
F + K P L ++V GDC +P +G+++ DRQ L+D + +V H AATVRF L +A
Sbjct: 65 FGNLMKTNPEALKRVVPCGGDCQEPDLGLSNSDRQVLIDEVQIVIHTAATVRFVEPLHIA 124
Query: 305 VSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVN-P-NHLIQITE 362
+++N RAT+ ++++AKEM L+SFVHVSTAYSNC + ERFY + P ++++ E
Sbjct: 125 LAVNTRATRLMIQLAKEMSHLESFVHVSTAYSNCVVEHVSERFYPEHLTCPAEKILELLE 184
Query: 363 LLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPG 422
++ +++DK+ P ++ +PNTY TK + E ++++ +P+++ RP ++IA+ KEP+PG
Sbjct: 185 SISPELLDKMAPALMGKYPNTYTYTKALTEQVIQKEAKDLPLSIFRPGVIIASYKEPMPG 244
Query: 423 WINNHYGPTVI 433
WI+N YGP +
Sbjct: 245 WIDNLYGPIAV 255
|
|
| FB|FBgn0038451 CG14893 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 468 (169.8 bits), Expect = 1.9e-66, Sum P(2) = 1.9e-66
Identities = 87/188 (46%), Positives = 134/188 (71%)
Query: 245 FDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVA 304
F+ + K P L ++ + GDCL P +GIN DR+ LV +H+V H AATVRF+ L VA
Sbjct: 76 FEVLLKAKPDALKRIFVIAGDCLDPDLGINRSDRKLLVSEVHIVIHGAATVRFNEPLHVA 135
Query: 305 VSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPV--NPNHLIQITE 362
++IN R T+ +L++AKEM QL++++H+STA+SNC IEE+FY + + N ++ ++E
Sbjct: 136 LAINTRGTRLMLQLAKEMLQLEAYLHISTAFSNCVIFRIEEKFYPEHLTCDANSVLAMSE 195
Query: 363 LLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPG 422
LL++ M+DK+ P +V +PNTY TK +AED+V R +P+++ RPS++IAT++EP+ G
Sbjct: 196 LLSEQMMDKLAPTLVGNFPNTYTYTKALAEDVVLREFGDLPLSIFRPSVIIATHEEPVSG 255
Query: 423 WINNHYGP 430
WI+N YGP
Sbjct: 256 WIDNLYGP 263
|
|
| FB|FBgn0038450 CG17560 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 435 (158.2 bits), Expect = 4.1e-65, Sum P(2) = 4.1e-65
Identities = 79/191 (41%), Positives = 130/191 (68%)
Query: 245 FDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVA 304
F+ + + P L ++ + GDCL P +GI+ D++ L + +V H AATVRFD L ++
Sbjct: 65 FEVLLRTKPDALQRVCPIAGDCLDPDLGISQSDQRILTAEVQIVIHGAATVRFDEALHIS 124
Query: 305 VSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVN--PNHLIQITE 362
++IN+RAT+ +L++AK+M QL SFVHVSTAYSNC I ERFY +N + ++ + E
Sbjct: 125 LAINVRATRLMLQLAKQMTQLVSFVHVSTAYSNCVVHDIAERFYPEHLNCSSDKILAVGE 184
Query: 363 LLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPG 422
L+++ ++D + P +V +PNTY TK +AED++ R +P+++ RP+I+++T KEP+ G
Sbjct: 185 LVSNKLLDAMEPSLVGSFPNTYTYTKALAEDVILREAGNLPLSIFRPAIIMSTYKEPLVG 244
Query: 423 WINNHYGPTVI 433
W++N +GP +
Sbjct: 245 WVDNLFGPLAL 255
|
|
| UNIPROTKB|F1NTE5 FAR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 440 (159.9 bits), Expect = 9.3e-64, Sum P(3) = 9.3e-64
Identities = 78/191 (40%), Positives = 129/191 (67%)
Query: 243 KFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLK 302
K FD +R+ CP++ K+ + + +P + I++ED + L+ +++VFHCAATVRFD LK
Sbjct: 4 KVFDRVREDCPNFHEKIKPINAELTQPKLAISAEDEEELLTRVNIVFHCAATVRFDEPLK 63
Query: 303 VAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITE 362
A+ +N T+ LLE+A++M++L++F+H+STAY+NC + I+E Y PP P L + E
Sbjct: 64 HALQLNAMGTQRLLELAQQMQKLEAFIHISTAYANCVRKCIDEIIYPPPAEPKKLFDLVE 123
Query: 363 LLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPG 422
L++ +I ITP ++ WPNTY TK ++E ++++ + +A++RPSIV A+ EP PG
Sbjct: 124 WLDESIIQDITPKLLGDWPNTYTYTKALSEYLIQQEKGNLNIAIIRPSIVGASWHEPFPG 183
Query: 423 WINNHYGPTVI 433
WI++ G + I
Sbjct: 184 WIDSFNGTSGI 194
|
|
| FB|FBgn0038449 CG17562 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 442 (160.7 bits), Expect = 1.0e-63, Sum P(2) = 1.0e-63
Identities = 82/191 (42%), Positives = 130/191 (68%)
Query: 245 FDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVA 304
F+ + K P L ++ + GDCL +GI+ DR+ L + +V H AATVRF+ L VA
Sbjct: 65 FELLLKSKPEALQRVCPIAGDCLDFDLGISENDRRLLASEVQIVIHGAATVRFNEPLHVA 124
Query: 305 VSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVN--PNHLIQITE 362
++IN RATK ++++AKEM+QL++FVHVSTA+SNC I+E FY +N + ++ + E
Sbjct: 125 LAINTRATKLMIQLAKEMRQLEAFVHVSTAFSNCVIYNIKENFYPEHLNCSSDKVLAMAE 184
Query: 363 LLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPG 422
L++D+++D + ++ +PNTY TK +AED++ + G+P+ + RP+++IA +KEPI G
Sbjct: 185 LMSDELLDNMEQALLGSFPNTYTYTKALAEDVILKEAGGLPLCIFRPAVIIAAHKEPISG 244
Query: 423 WINNHYGPTVI 433
WI+N YGP I
Sbjct: 245 WIDNMYGPMAI 255
|
|
| ZFIN|ZDB-GENE-040426-2908 far1 "fatty acyl CoA reductase 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 449 (163.1 bits), Expect = 1.8e-63, Sum P(3) = 1.8e-63
Identities = 90/217 (41%), Positives = 141/217 (64%)
Query: 218 LKVA-VSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSE 276
+K A V + +A +A +M K FD +R+ P + K+VA+ D +P + +++E
Sbjct: 37 VKAAYVLVRPKAGQAPDARIADMINCKLFDRLREDQPDFAGKIVAINSDLTQPNLDLSAE 96
Query: 277 DRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYS 336
D++TL I+VVFHCAAT+RF+ LK A+ +N+ AT+ ++ +A MK L+ F+HVSTAY+
Sbjct: 97 DQETLTGCINVVFHCAATIRFNEPLKDAMQLNVLATQKMVSLAHRMKHLEVFIHVSTAYA 156
Query: 337 NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396
NC + +IEE Y PPV+ LI E ++D ++ +TP ++ PNTY TK +AE +V+
Sbjct: 157 NCDRELIEEVVYPPPVDYRKLIDTLEWMDDKLVSLMTPRLLGERPNTYTYTKALAEQLVQ 216
Query: 397 RGGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVI 433
+ + +A++RPSIV A+ KEP PGWI+N GP+ I
Sbjct: 217 QECGNLNIAIIRPSIVGASWKEPFPGWIDNFNGPSGI 253
|
|
| FB|FBgn0034145 CG5065 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 441 (160.3 bits), Expect = 2.7e-63, Sum P(3) = 2.7e-63
Identities = 82/194 (42%), Positives = 124/194 (63%)
Query: 238 EMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF 297
E+ F+ +R+ P LSK++ ++GD +GI+ +D+ L N+ VVFH AATV+F
Sbjct: 173 ELLNAPLFESLRQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKF 232
Query: 298 DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHL 357
D LK++V+IN+ TK L+E+ M L + +HVSTAY NC + + E Y PP NP+ +
Sbjct: 233 DEKLKLSVTINMLGTKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDI 292
Query: 358 IQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNK 417
I + L +D++D++TP ++ PNTY TK +AE M+ + +PVA+VRPSIV A+
Sbjct: 293 ISLINWLPEDILDQLTPRLIGKRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLN 352
Query: 418 EPIPGWINNHYGPT 431
EP GW++N GPT
Sbjct: 353 EPFAGWVDNFNGPT 366
|
|
| UNIPROTKB|E1C6H7 FAR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 438 (159.2 bits), Expect = 1.2e-61, Sum P(3) = 1.2e-61
Identities = 82/214 (38%), Positives = 138/214 (64%)
Query: 220 VAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQ 279
V + + +A +++ E M + K FD +R+ CP++ K+ + + +P + I++ED +
Sbjct: 40 VYILVRPKAGQSMQERVANMLKCKVFDRVREDCPNFHEKIKPINAELTQPKLAISAEDEE 99
Query: 280 TLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCR 339
L+ +++VFHCAATVRFD LK A+ +N T+ LLE+A++M++L++F+H+STAY+NC
Sbjct: 100 ELLTRVNIVFHCAATVRFDEPLKHALQLNAMGTQRLLELAQQMQKLEAFIHISTAYANCV 159
Query: 340 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG 399
+ I+E Y PP P L + E L++ +I ITP ++ WPNTY TK ++E ++++
Sbjct: 160 RKCIDEIIYPPPAEPKKLFDLVEWLDESIIQDITPKLLGDWPNTYTYTKALSEYLIQQEK 219
Query: 400 AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVI 433
+ +A++RPSIV A+ EP P IN + PT I
Sbjct: 220 GNLNIAIIRPSIVGASWHEPFPVSINPQF-PTEI 252
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 782 | |||
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 4e-90 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 2e-61 | |
| cd09071 | 92 | cd09071, FAR_C, C-terminal domain of fatty acyl Co | 1e-27 | |
| cd09071 | 92 | cd09071, FAR_C, C-terminal domain of fatty acyl Co | 2e-26 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 2e-25 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 2e-25 | |
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 6e-25 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 4e-24 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 2e-23 | |
| pfam03015 | 94 | pfam03015, Sterile, Male sterility protein | 5e-21 | |
| pfam03015 | 94 | pfam03015, Sterile, Male sterility protein | 7e-21 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 6e-17 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 7e-14 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 5e-13 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 2e-08 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 3e-08 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 4e-08 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 1e-07 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 1e-06 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 2e-06 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 3e-06 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 4e-06 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 4e-06 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 1e-05 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 0.001 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 0.001 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 285 bits (732), Expect = 4e-90
Identities = 121/320 (37%), Positives = 180/320 (56%), Gaps = 40/320 (12%)
Query: 219 KVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDR 278
K+ + I ++ ++ E +E+ + K FD R P + SK+V + GD +P +G++ ED
Sbjct: 29 KIYLLIRGKSGQSAEERLRELLKDKLFDRGRNLNPLFESKIVPIEGDLSEPNLGLSDEDL 88
Query: 279 QTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNC 338
QTL++ ++++ HCAATV FD L A+SIN+ T LLE+AK K+LK+FVHVSTAY N
Sbjct: 89 QTLIEEVNIIIHCAATVTFDERLDEALSINVLGTLRLLELAKRCKKLKAFVHVSTAYVNG 148
Query: 339 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398
+ +IEE+ Y PP +P LI I EL++D +++ TP ++ PNTY TK +AE +V +
Sbjct: 149 DRQLIEEKVYPPPADPEKLIDILELMDDLELERATPKLLGGHPNTYTFTKALAERLVLKE 208
Query: 399 GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAG 458
+P+ +VRPSI V AT KEP PGWI+N GP G+ G
Sbjct: 209 RGNLPLVIVRPSI--------------------VGATLKEPFPGWIDNFNGPDGLFLAYG 248
Query: 459 LGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDT 518
G+LR+M+ADP VAD++P D V N +++AA + K
Sbjct: 249 KGILRTMNADPNAVADIIPVDVVANALLAAAA---YSGVRKPR----------------- 288
Query: 519 DIEIYNYVSSTQKPIKWKEF 538
++E+Y+ SS P W E
Sbjct: 289 ELEVYHCGSSDVNPFTWGEA 308
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 207 bits (528), Expect = 2e-61
Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 51/263 (19%)
Query: 227 RATK---ALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD 283
RA AL + +E+ + FD ++ L +++ V GD +P +G++ ED Q L +
Sbjct: 30 RAKDGESALERLRQELLKYGLFDRLK-----ALERIIPVAGDLSEPNLGLSDEDFQELAE 84
Query: 284 NIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNC-RQPI 342
+ V+ H AATV F + N+ T+ +L +AK+MK+ F HVSTAY N R +
Sbjct: 85 EVDVIIHNAATVNFVEPYSDLRATNVLGTREVLRLAKQMKK-LPFHHVSTAYVNGERGGL 143
Query: 343 IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGM 402
+EE+ +D+ P ++ PN Y +K +AE +VR G+
Sbjct: 144 LEEK-------------------PYKLDEDEPALLGGLPNGYTQSKWLAEQLVREAAGGL 184
Query: 403 PVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLL 462
PV + RPSI+ E GWIN +GP G++ GAGLG+L
Sbjct: 185 PVVIYRPSIITG---ESRTGWINGDD-------------------FGPRGLLGGAGLGVL 222
Query: 463 RSMHADPELVADMVPADNVINCI 485
+ DP+ D+VP D V N I
Sbjct: 223 PDILGDPDARLDLVPVDYVANAI 245
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|176924 cd09071, FAR_C, C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Score = 106 bits (268), Expect = 1e-27
Identities = 35/74 (47%), Positives = 56/74 (75%)
Query: 575 FLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMT 634
FLHLLPA ++D +L+GR+P+LL Y+KIHK +++ +F+T ++ F N NT+ L+ +++
Sbjct: 1 FLHLLPAYLLDLLLRLLGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLS 60
Query: 635 EEDRALFNFDMSQL 648
EEDR LFNFD+ +
Sbjct: 61 EEDRELFNFDIRSI 74
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. Length = 92 |
| >gnl|CDD|176924 cd09071, FAR_C, C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 2e-26
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 664 RSLKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQLDWEK 723
R +LL Y+KIHK +++ +F+T ++ F N NT+ L+ +++EEDR LFNFD+ +DW+
Sbjct: 19 RKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLSEEDRELFNFDIRSIDWDD 78
Query: 724 YMFWHIRGIRAYL 736
Y +I G+R YL
Sbjct: 79 YFENYIPGLRKYL 91
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. Length = 92 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 2e-25
Identities = 36/76 (47%), Positives = 53/76 (69%)
Query: 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRAT 229
P + SK+V + GD +P +G++ ED QTL++ ++++ HCAATV FD L A+SIN+ T
Sbjct: 63 PLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTFDERLDEALSINVLGT 122
Query: 230 KALLEMAKEMKQLKFF 245
LLE+AK K+LK F
Sbjct: 123 LRLLELAKRCKKLKAF 138
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 2e-25
Identities = 110/441 (24%), Positives = 176/441 (39%), Gaps = 103/441 (23%)
Query: 256 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKAL 315
LSK+V V G+ + +G+ + + + V+ + AA FD VA+ IN R L
Sbjct: 191 LSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHL 250
Query: 316 LEMAKEMKQLKSFVHVSTAYSNC-RQPIIEERFY-------------EPPVNPNHLIQIT 361
+ AK+ K+LK F+ VSTAY N RQ I E+ + + + I
Sbjct: 251 MSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIE 310
Query: 362 ELLN--------DDMIDKITPGIVDY---------WPNTYALTKQVAEDMVRRGGAGMPV 404
+ + + D W +TY TK + E ++ +PV
Sbjct: 311 AEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMRGDIPV 370
Query: 405 AMVRPSIVIATNKEPIPGWI--NNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLL 462
++RPS++ +T K+P PGW+ N P V+ +YG G L
Sbjct: 371 VIIRPSVIESTWKDPFPGWMEGNRMMDPIVL-------------YYGK---------GQL 408
Query: 463 RSMHADPELVADMVPADNVINCIISA-AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIE 521
ADP V D+VPAD V+N ++A A + A K +I
Sbjct: 409 TGFLADPNGVLDVVPADMVVNATLAAMAKH--------GGAAK-------------PEIN 447
Query: 522 IYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIH----KLYI---- 573
+Y SS P+ +++ L + P + +K + IH KL+
Sbjct: 448 VYQIASSVVNPLVFQDLARLLYEHYKSSP---------YMDSKGRPIHVPPMKLFSSMED 498
Query: 574 LFLHLLPALIVDTAAKLMGRQ-PKLLDAYQKIHKFS-EVISFFST--QQFT-----FTNF 624
HL ++ + M KL + I S E + ++ + +T F N
Sbjct: 499 FSSHLWRDALLRSGLAGMSSSDRKLSQKLENICAKSVEQAKYLASIYEPYTFYGGRFDNS 558
Query: 625 NTQRLYTKMTEEDRALFNFDM 645
NTQRL +M+EE++A F FD+
Sbjct: 559 NTQRLMERMSEEEKAEFGFDV 579
|
Length = 605 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 6e-25
Identities = 107/429 (24%), Positives = 175/429 (40%), Gaps = 88/429 (20%)
Query: 258 KMVAVTGDCLKPGVGINSED-RQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALL 316
K+ V GD +G+ + R+ + I +V + AAT FD VA+ IN +L
Sbjct: 85 KVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVL 144
Query: 317 EMAKEMKQLKSFVHVSTAYSNCRQP--IIEERFY-EPPVNPNHLIQI-----------TE 362
AK+ ++K +HVSTAY + I+E+ F+ +N N + I E
Sbjct: 145 NFAKKCVKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKE 204
Query: 363 LLNDDMIDK-ITPGIVDY---------WPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIV 412
L D ++ IT + D WPNTY TK + E ++ +P+ ++RP+++
Sbjct: 205 LNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENLPLVIIRPTMI 264
Query: 413 IATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELV 472
+T KEP PGWI + T I++ ++ G G G L ADP V
Sbjct: 265 TSTYKEPFPGWIEG------LRT--------IDS------VIVGYGKGKLTCFLADPNSV 304
Query: 473 ADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKP 532
D++PAD V+N +I A + IY+ SS + P
Sbjct: 305 LDVIPADMVVNAMIVAM--AAHAGGQGSEI-------------------IYHVGSSLKNP 343
Query: 533 IKWKEFMAL-----------NEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLHLLPA 581
+K+ N++ P I + + + Y +I Y+L L L
Sbjct: 344 VKFSNLHDFAYRYFSKNPWINKEGSPVKVGKGTILSTMASFSLYMTIR--YLLPLKAL-Q 400
Query: 582 LIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQF---TFTNFNTQRLYTKMTEEDR 638
L+ K G + L+ +KI ++ + F F + NT++L K E +
Sbjct: 401 LVNIILPKRYGDKYTDLN--RKIKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGK 458
Query: 639 A---LFNFD 644
+F+FD
Sbjct: 459 EEADMFDFD 467
|
Length = 491 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 4e-24
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 65 ESFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYA 124
++FVHVSTAY N + +IEE+ Y PP +P LI I EL++D +++ TP ++ PNTY
Sbjct: 136 KAFVHVSTAYVNGDRQLIEEKVYPPPADPEKLIDILELMDDLELERATPKLLGGHPNTYT 195
Query: 125 LTKQVAEDMVRRGGAGMPVAMVRPSI 150
TK +AE +V + +P+ +VRPSI
Sbjct: 196 FTKALAERLVLKERGNLPLVIVRPSI 221
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 2e-23
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 127 KQVAEDMVRRGGAGMPVAMVRPSID------LGILFYSEQFFDPMRKRCPHYLSKMVAVT 180
K + E ++R +VR L FD ++ L +++ V
Sbjct: 10 KVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLK-----ALERIIPVA 64
Query: 181 GDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMK 240
GD +P +G++ ED Q L + + V+ H AATV F + N+ T+ +L +AK+MK
Sbjct: 65 GDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFVEPYSDLRATNVLGTREVLRLAKQMK 124
Query: 241 QLKF 244
+L F
Sbjct: 125 KLPF 128
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|111859 pfam03015, Sterile, Male sterility protein | Back alignment and domain information |
|---|
Score = 87.7 bits (218), Expect = 5e-21
Identities = 36/74 (48%), Positives = 49/74 (66%)
Query: 575 FLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMT 634
F H LPA +D +L G++P+L+ Y+KIHK EV+ FS ++ F N NT+ L KM+
Sbjct: 1 FYHTLPAYFLDLLLRLYGQKPRLVKLYRKIHKGLEVLQPFSLNEWIFDNKNTRELREKMS 60
Query: 635 EEDRALFNFDMSQL 648
EED+ LFNFDM L
Sbjct: 61 EEDKKLFNFDMESL 74
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 94 |
| >gnl|CDD|111859 pfam03015, Sterile, Male sterility protein | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 7e-21
Identities = 39/83 (46%), Positives = 54/83 (65%)
Query: 657 LNTLVSTRSLKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDM 716
L + + +L+ Y+KIHK EV+ FS ++ F N NT+ L KM+EED+ LFNFDM
Sbjct: 12 LLLRLYGQKPRLVKLYRKIHKGLEVLQPFSLNEWIFDNKNTRELREKMSEEDKKLFNFDM 71
Query: 717 SQLDWEKYMFWHIRGIRAYLVKD 739
LDW++Y IRGIR YL+K+
Sbjct: 72 ESLDWDEYFRNAIRGIRKYLLKE 94
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 94 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 81.6 bits (202), Expect = 6e-17
Identities = 55/231 (23%), Positives = 90/231 (38%), Gaps = 52/231 (22%)
Query: 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLE 317
++ + GD +P +G+++ + L + V HCAA+ F A + A N+ T+ +LE
Sbjct: 50 RVRVLEGDLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLE 109
Query: 318 MAKEMKQLKSFVHVSTAY-SNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGI 376
+A + + F +VSTAY + R+ I E P N
Sbjct: 110 LAARLDI-QRFHYVSTAYVAGNREGNIRETELNPGQN----------------------- 145
Query: 377 VDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATN 436
+ N Y +K AE +VR +P+ + RPSIV+ G +
Sbjct: 146 ---FKNPYEQSKAEAEQLVRAAATQIPLTVYRPSIVV---------------GDSKT--- 184
Query: 437 KEPIPGWINNHYGPTG-IVAGAGLGLLRSMHADPELVADMVPADNVINCII 486
G I G + A LG M + ++VP D V + I+
Sbjct: 185 -----GRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIV 230
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 7e-14
Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 41/186 (22%)
Query: 247 PMRKRCPHY---------LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF 297
+ Y LS++ V GD KP +G++ +D Q L + + V+ H A V +
Sbjct: 43 RLIDNLKEYGLNLWDELELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNW 102
Query: 298 ---DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNP 354
LK A N+ TK LL++A K LK VST
Sbjct: 103 VYPYEELKPA---NVLGTKELLKLAATGK-LKPLHFVSTLS------------------- 139
Query: 355 NHLIQITELLNDDMIDKITPGIV--DYWPNTYALTKQVAEDMVRRGGA-GMPVAMVRPSI 411
+ E N ++ + + PN Y +K VAE ++R G+PVA++RP
Sbjct: 140 ---VFSAEEYNALDDEESDDMLESQNGLPNGYIQSKWVAEKLLREAANRGLPVAIIRPGN 196
Query: 412 VIATNK 417
+ ++
Sbjct: 197 IFGDSE 202
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 5e-13
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 20/86 (23%)
Query: 66 SFVHVSTAYSNC-RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYA 124
F HVSTAY N R ++EE+ +D+ P ++ PN Y
Sbjct: 127 PFHHVSTAYVNGERGGLLEEK-------------------PYKLDEDEPALLGGLPNGYT 167
Query: 125 LTKQVAEDMVRRGGAGMPVAMVRPSI 150
+K +AE +VR G+PV + RPSI
Sbjct: 168 QSKWLAEQLVREAAGGLPVVIYRPSI 193
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 2e-08
Identities = 41/177 (23%), Positives = 66/177 (37%), Gaps = 33/177 (18%)
Query: 249 RKRCPHYL-------SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF---D 298
K Y ++ V GD +P +G++ Q L +N+ ++ H AA V
Sbjct: 45 EKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPY 104
Query: 299 AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLI 358
+ L+ A N+ T +L +A K K +VS+ E N
Sbjct: 105 SELRGA---NVLGTAEVLRLAATGK-PKPLHYVSSI-----------SVGETEYYSN--- 146
Query: 359 QITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR-GGAGMPVAMVRPSIVIA 414
+ D++ G Y +K VAE +VR G G+PV + RP +
Sbjct: 147 --FTVDFDEISPTRNVGQG--LAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITG 199
|
Length = 382 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 39/171 (22%), Positives = 63/171 (36%), Gaps = 43/171 (25%)
Query: 280 TLVDNIHVVFHCAATVRFDA---HLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTA-- 334
++D + VV H AA V A + N+ T LLE A++ +K FV+ S+A
Sbjct: 26 VVIDRLDVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAG-VKRFVYASSASV 84
Query: 335 YSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394
Y + EE P++P Y ++K AE +
Sbjct: 85 YGSPEGLPEEEETPPRPLSP-----------------------------YGVSKLAAEHL 115
Query: 395 VRRGGA--GMPVAMVRPSIVIATNKEPIPGWINNHYGPTVI--ATNKEPIP 441
+R G G+PV ++R + V P + I A +P+
Sbjct: 116 LRSYGESYGLPVVILRLANVYG----PGQRPRLDGVVNDFIRRALEGKPLT 162
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 4e-08
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 175 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLE 234
++ + GD +P +G+++ + L + V HCAA+ F A + A N+ T+ +LE
Sbjct: 50 RVRVLEGDLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLE 109
Query: 235 MAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDC 266
+A + +F HY+S V G+
Sbjct: 110 LAARLDIQRF---------HYVST-AYVAGNR 131
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 1e-07
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 30/162 (18%)
Query: 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF---DAHLKVAVSINLRATK 313
++ V GD +P +G++ + + L +N+ + H A V + + L+ A N+ T+
Sbjct: 61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRGA---NVLGTR 117
Query: 314 ALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKIT 373
+L +A + K +VST L +TE DD T
Sbjct: 118 EVLRLA-ASGRAKPLHYVSTISVG---------------AAIDLSTVTE---DDATV--T 156
Query: 374 PGIVDYWPNTYALTKQVAEDMVRRGGA-GMPVAMVRPSIVIA 414
P YA +K VAE +VR G+PV +VRP ++
Sbjct: 157 PPP--GLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILG 196
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 1e-06
Identities = 35/145 (24%), Positives = 48/145 (33%), Gaps = 34/145 (23%)
Query: 276 EDRQTLVD---NIHVVFHCAATVRF-DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHV 331
D +L VFH AA K N+ T+ +L+ A E ++ VH
Sbjct: 51 TDAASLAAAMKGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALE-AGVRRVVHT 109
Query: 332 ST--AYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQ 389
S+ A I+E P N PN Y +K
Sbjct: 110 SSIAALGGPPDGRIDETT---PWNERPF-----------------------PNDYYRSKL 143
Query: 390 VAEDMVRRGGA-GMPVAMVRPSIVI 413
+AE V A G+ V +V PS V
Sbjct: 144 LAELEVLEAAAEGLDVVIVNPSAVF 168
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 2e-06
Identities = 31/137 (22%), Positives = 47/137 (34%), Gaps = 40/137 (29%)
Query: 287 VVFHCAATVRF----DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYS----NC 338
V H AA + + +N+ T LLE A+ +K FV S+
Sbjct: 67 AVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGDPP 125
Query: 339 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR-- 396
PI E+ P+NP Y ++K AE ++R
Sbjct: 126 PLPIDEDLGPPRPLNP-----------------------------YGVSKLAAEQLLRAY 156
Query: 397 RGGAGMPVAMVRPSIVI 413
G+PV ++RP V
Sbjct: 157 ARLYGLPVVILRPFNVY 173
|
Length = 314 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 3e-06
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 24/111 (21%)
Query: 159 EQFFDPMRKRCPHY---------LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCA 209
E + + Y LS++ V GD KP +G++ +D Q L + + V+ H
Sbjct: 38 EAALERLIDNLKEYGLNLWDELELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNG 97
Query: 210 ATVRF---DAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLS 257
A V + LK A N+ TK LL++A K H++S
Sbjct: 98 ANVNWVYPYEELKPA---NVLGTKELLKLAATGKLKPL---------HFVS 136
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 4e-06
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKAL 232
LSK+V V G+ + +G+ + + + V+ + AA FD VA+ IN R L
Sbjct: 191 LSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHL 250
Query: 233 LEMAKEMKQLKFF 245
+ AK+ K+LK F
Sbjct: 251 MSFAKKCKKLKLF 263
|
Length = 605 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 4e-06
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 692 FTNFNTQRLYTKMTEEDRALFNFDMSQLDWEKYMF-WHIRGIRAYLVK 738
F N NTQRL +M+EE++A F FD+ +DW Y+ HI G+R +++K
Sbjct: 555 FDNSNTQRLMERMSEEEKAEFGFDVGSIDWRDYITNVHIPGLRRHVMK 602
|
Length = 605 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 37/172 (21%), Positives = 51/172 (29%), Gaps = 57/172 (33%)
Query: 285 IHVVFHCAATVRFDAHLK---VAVSINLRATKALLEMAKEMKQLKSFVHVSTA--YSNCR 339
V H AA A + + N+ T LLE A+ K FV S++ Y +
Sbjct: 64 PDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGV-KRFVFASSSEVYGDVA 122
Query: 340 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG 399
P I E P++P YA K AE +V
Sbjct: 123 DPPITEDTPLGPLSP-----------------------------YAAAKLAAERLVEAYA 153
Query: 400 A--GMPVAMVRPSIVIATNKEPIPGWINNHYGP---TVIATNKEPIPGWINN 446
G+ ++R N YGP T+ IP I
Sbjct: 154 RAYGLRAVILRLF---------------NVYGPGNPDPFVTHV--IPALIRR 188
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 0.001
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 175 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLE 234
++V + GD +PG+G++ D L +I V H AA A + + N+ T+ ++E
Sbjct: 52 RVVPLVGDLTEPGLGLSEADIAELG-DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVE 110
Query: 235 MAKEMKQLKFFDPMRKRCPHYLSKMVAVTGD 265
+A+ ++ H++S +AV GD
Sbjct: 111 LAER---------LQAATFHHVSS-IAVAGD 131
|
Length = 657 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 0.001
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLE 317
++V + GD +PG+G++ D L +I V H AA A + + N+ T+ ++E
Sbjct: 52 RVVPLVGDLTEPGLGLSEADIAELG-DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVE 110
Query: 318 MAKEMKQLKSFVHVS 332
+A+ + Q +F HVS
Sbjct: 111 LAERL-QAATFHHVS 124
|
Length = 657 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 782 | |||
| KOG1221|consensus | 467 | 100.0 | ||
| PLN02996 | 491 | fatty acyl-CoA reductase | 100.0 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 100.0 | |
| KOG1221|consensus | 467 | 100.0 | ||
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.97 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.97 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.96 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.95 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.94 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.93 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.93 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.93 | |
| KOG0747|consensus | 331 | 99.92 | ||
| PF03015 | 94 | Sterile: Male sterility protein; InterPro: IPR0042 | 99.92 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.9 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.9 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.9 | |
| KOG1502|consensus | 327 | 99.9 | ||
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.89 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.89 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.89 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.89 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.89 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.89 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.89 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.88 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.88 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.88 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.87 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.87 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.87 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.87 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.87 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.87 | |
| cd09071 | 92 | FAR_C C-terminal domain of fatty acyl CoA reductas | 99.87 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.86 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.86 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.86 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.86 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.85 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.85 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.84 | |
| KOG1371|consensus | 343 | 99.84 | ||
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.84 | |
| KOG1430|consensus | 361 | 99.84 | ||
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.84 | |
| KOG1429|consensus | 350 | 99.84 | ||
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.83 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.83 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.82 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.81 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.81 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.81 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.81 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.79 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.79 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.79 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.74 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.73 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.73 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.73 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.72 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.71 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.7 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.68 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.65 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.45 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.45 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.44 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.39 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.38 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.36 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.35 | |
| KOG1431|consensus | 315 | 99.33 | ||
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.32 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.31 | |
| KOG2865|consensus | 391 | 99.28 | ||
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.27 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.23 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.23 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.2 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.19 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.18 | |
| PF03015 | 94 | Sterile: Male sterility protein; InterPro: IPR0042 | 99.17 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.14 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.12 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.08 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.07 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.07 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.07 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.05 | |
| cd09071 | 92 | FAR_C C-terminal domain of fatty acyl CoA reductas | 99.05 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.05 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.04 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.04 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.02 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.01 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 98.99 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.99 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.98 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 98.97 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.96 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.94 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 98.93 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.93 | |
| PRK05717 | 255 | oxidoreductase; Validated | 98.92 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.92 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.92 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.92 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.91 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.9 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 98.89 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 98.89 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 98.88 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.88 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 98.85 | |
| KOG1372|consensus | 376 | 98.84 | ||
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 98.84 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 98.84 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.83 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 98.81 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.81 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 98.81 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.79 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 98.79 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 98.79 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 98.78 | |
| KOG2774|consensus | 366 | 98.78 | ||
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 98.77 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.76 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 98.76 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.75 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 98.73 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 98.73 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.73 | |
| PRK08643 | 256 | acetoin reductase; Validated | 98.73 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.72 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.72 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 98.72 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 98.72 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 98.71 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 98.71 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 98.71 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.7 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 98.7 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 98.69 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 98.68 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.68 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 98.67 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.66 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.65 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 98.65 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.65 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 98.65 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 98.64 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 98.64 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 98.64 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 98.62 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 98.62 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 98.61 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 98.61 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.61 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 98.61 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 98.61 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.6 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.6 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 98.6 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.59 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 98.59 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.58 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 98.57 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 98.57 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 98.56 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.56 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 98.56 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 98.56 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.56 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.56 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.55 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.55 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 98.53 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 98.53 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.52 | |
| KOG1205|consensus | 282 | 98.52 | ||
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 98.52 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 98.52 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 98.52 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 98.51 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.5 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 98.49 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.49 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.48 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.48 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.48 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.47 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.46 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.46 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.46 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.45 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 98.43 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.43 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.42 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.42 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 98.42 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.41 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.4 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.39 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.39 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.39 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.38 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.35 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 98.35 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.35 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.34 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.33 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.33 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.33 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.32 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.3 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.3 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 98.29 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.28 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.27 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 98.26 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.25 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.22 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.2 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.2 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.2 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.19 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 98.19 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.16 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.16 | |
| KOG4039|consensus | 238 | 98.12 | ||
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 98.12 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.11 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 98.11 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.1 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.08 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.06 | |
| KOG1201|consensus | 300 | 98.06 | ||
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.03 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 97.99 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 97.97 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 97.96 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 97.91 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 97.88 | |
| PLN00015 | 308 | protochlorophyllide reductase | 97.86 | |
| KOG4288|consensus | 283 | 97.85 | ||
| KOG1208|consensus | 314 | 97.64 | ||
| KOG1610|consensus | 322 | 97.64 | ||
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 97.63 | |
| KOG1611|consensus | 249 | 97.63 | ||
| KOG3019|consensus | 315 | 97.56 | ||
| KOG0725|consensus | 270 | 97.53 | ||
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.44 | |
| KOG1203|consensus | 411 | 97.39 | ||
| KOG4169|consensus | 261 | 97.33 | ||
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 97.28 | |
| KOG1200|consensus | 256 | 97.09 | ||
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.05 | |
| KOG1210|consensus | 331 | 96.77 | ||
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 96.75 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 96.72 | |
| KOG1209|consensus | 289 | 96.65 | ||
| KOG1207|consensus | 245 | 96.17 | ||
| KOG1204|consensus | 253 | 96.02 | ||
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 95.51 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 95.41 | |
| KOG1478|consensus | 341 | 95.01 | ||
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 94.85 | |
| KOG1014|consensus | 312 | 94.66 | ||
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 94.34 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 94.32 | |
| PLN00106 | 323 | malate dehydrogenase | 94.13 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 93.94 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 93.89 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 93.69 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 93.47 | |
| KOG0747|consensus | 331 | 93.45 | ||
| KOG1430|consensus | 361 | 93.17 | ||
| KOG1199|consensus | 260 | 91.89 | ||
| PLN02214 | 342 | cinnamoyl-CoA reductase | 91.21 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 90.92 | |
| PF00550 | 67 | PP-binding: Phosphopantetheine attachment site; In | 89.69 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 89.67 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 89.17 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 88.63 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 88.6 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 88.1 | |
| PTZ00374 | 1108 | dihydroxyacetone phosphate acyltransferase; Provis | 87.75 | |
| KOG1178|consensus | 1032 | 87.67 | ||
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 87.65 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 87.41 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 86.96 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 86.49 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 85.42 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 85.37 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 85.01 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 83.4 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 83.4 | |
| KOG1202|consensus | 2376 | 83.09 | ||
| PRK09620 | 229 | hypothetical protein; Provisional | 82.7 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 82.57 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 82.02 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 81.22 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 80.81 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 80.7 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 80.22 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 80.19 |
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-83 Score=695.08 Aligned_cols=456 Identities=39% Similarity=0.708 Sum_probs=428.6
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeee-ecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVR-FDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~-~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
.+.+|+|+||| |+||.+ +.|+++. ++ +++..+||+|+|+++++++++|++...+.++|+.++
T Consensus 9 f~~~k~i~vTG-----~tGFlg---KVliEkl---------Lr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~ 71 (467)
T KOG1221|consen 9 FYKNKTIFVTG-----ATGFLG---KVLIEKL---------LRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLK 71 (467)
T ss_pred HhCCCeEEEEc-----ccchhH---HHHHHHH---------HhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHH
Confidence 46799999999 777765 4554442 22 357889999999999999999999998889999999
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEE
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFV 329 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV 329 (782)
+.+|+..+|+.++.||+++++||+++++++.+.++||+|||+||+++|+++++.+..+|+.||++++++|+++++++.|+
T Consensus 72 ~~~p~~l~Kv~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~v 151 (467)
T KOG1221|consen 72 EKKPEALEKVVPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALV 151 (467)
T ss_pred hhCccceecceeccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecceeccCCCcccccccCCCC--ChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEe
Q psy16243 330 HVSTAYSNCRQPIIEERFYEPPV--NPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMV 407 (782)
Q Consensus 330 ~vST~~v~~~~~~i~E~~~~~~~--~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~Iv 407 (782)
|+||+|+++....++|++|+.+. ++++++++.++++++.+++++|...++|||+|++||++||+++.++..++|++|+
T Consensus 152 hVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIi 231 (467)
T KOG1221|consen 152 HVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVII 231 (467)
T ss_pred EeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEE
Confidence 99999999988999999999887 8999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHH
Q psy16243 408 RPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIIS 487 (782)
Q Consensus 408 Rp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~ 487 (782)
||++|.+++++|+| ||.+|.+|+.+++.++++|.++.+.++.+...|+||||+|+|++++
T Consensus 232 RPsiI~st~~EP~p--------------------GWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia 291 (467)
T KOG1221|consen 232 RPSIITSTYKEPFP--------------------GWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIA 291 (467)
T ss_pred cCCceeccccCCCC--------------------CccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHH
Confidence 99999999999999 7788888888899999999999999999999999999999999999
Q ss_pred hhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCcceeceeeEeccchH
Q psy16243 488 AAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKS 567 (782)
Q Consensus 488 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~~~~~~~~~~~~~~~ 567 (782)
+++..+... ..+...+||++++..||++|+++.+.......+.|+...+|+|...++++.|
T Consensus 292 ~~~~~~~~~-------------------~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~~~Pl~~~iw~P~~~~~sn~~ 352 (467)
T KOG1221|consen 292 SAWQHAGNS-------------------KEKTPPIYHLTSSNDNPVTWGDFIELALRYFEKIPLEKMIWYPFGTLTSNPW 352 (467)
T ss_pred HHHHHhccC-------------------CCCCCcEEEecccccCcccHHHHHHHHHHhcccCCcccceeccCceeeecHh
Confidence 998764320 0134789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhccccccccccccchHHHHhhcCHHHHhhhcccccc
Q psy16243 568 IHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQ 647 (782)
Q Consensus 568 ~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~~~~~f~~~~w~f~~~n~~~L~~~l~~~Dr~~F~fd~~~ 647 (782)
.|.+..+++|++|+++.|.+.++.|+||.+.|+|+|+++.+.+
T Consensus 353 ~f~~~~~~~h~lPa~~~d~~~~i~g~k~~~~k~~~ki~~~~~~------------------------------------- 395 (467)
T KOG1221|consen 353 LFNLAAFLYHTLPAYILDLLLRLLGKKPRLVKLYRKIHKLVKL------------------------------------- 395 (467)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhCCChhhhHHHHHHHHHHHh-------------------------------------
Confidence 9999999999999999999999999999999999999999888
Q ss_pred ccccccccchhhhhhHhHHHHHHHHHHHHhhhhcccccceeeEEeecchHHHHHhhcCcccccccccCCCCCCHHHHHHH
Q psy16243 648 LGSFEVHSTLNTLVSTRSLKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQLDWEKYMFW 727 (782)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~f~~~n~~~l~~~~~~~d~~~f~~~~~~~~w~~y~~~ 727 (782)
++||++++|+|+++|+++|+.+|+++||++|+|||+++||++|+.+
T Consensus 396 ----------------------------------l~~f~~~~w~Fd~~n~~~L~~~~~~~d~~~f~fd~~~ldW~ey~~~ 441 (467)
T KOG1221|consen 396 ----------------------------------LEPFSLFKWIFDNKNTEKLREKMSEEDKRLFNFDMKQLDWEEYFNR 441 (467)
T ss_pred ----------------------------------hhhheeceEEecCccHHHHHHhCCHHHHhhcCCCcccCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCChHHHHHHHHH
Q psy16243 728 HIRGIRAYLVKDPLSTVPDGIRLRRR 753 (782)
Q Consensus 728 ~~~G~~~y~~ke~~~~~~~~~~~~~~ 753 (782)
|++|+|+|++||+++++|+||++++|
T Consensus 442 ~i~G~r~~llKe~~e~l~~~r~~~kr 467 (467)
T KOG1221|consen 442 HLLGLRKYLLKESPESLPQARKRLKR 467 (467)
T ss_pred HHHHHHHHHhcCChhhhHHHHHhhcC
Confidence 99999999999999999999999875
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-66 Score=586.15 Aligned_cols=443 Identities=26% Similarity=0.381 Sum_probs=373.2
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHH-Hhhccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAK-EMKQLKFFDPMR 249 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~-~~~~~~~f~~l~ 249 (782)
.+.+|+|+|||.+|+.|..+ ++.|+. ..++..+||||+|+++++++++|+. ++.+.++|++++
T Consensus 8 ~~~~k~VlvTGaTGFlG~~l----l~~LL~------------~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~ 71 (491)
T PLN02996 8 FLENKTILVTGATGFLAKIF----VEKILR------------VQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLR 71 (491)
T ss_pred HhCCCeEEEeCCCcHHHHHH----HHHHHh------------hCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHH
Confidence 46789999999544444333 233321 1245679999999999999999985 777778888776
Q ss_pred ccCcccc-----cceeEEecCCCCCCCCCCHHh-HHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHcc
Q psy16243 250 KRCPHYL-----SKMVAVTGDCLKPGVGINSED-RQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMK 323 (782)
Q Consensus 250 ~~~~~~~-----~kv~~i~gDi~~~~lGl~~~~-~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~ 323 (782)
+..++.. .+++++.||+++++|||++.+ ++.+++++|+|||+||.+++..++..+.++|+.||.+++++|++++
T Consensus 72 ~~~~~~~~~~~~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 151 (491)
T PLN02996 72 EKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCV 151 (491)
T ss_pred HhcchhhhhhhhcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6555433 799999999999999998876 6788899999999999999988899999999999999999999987
Q ss_pred CCceEEEEecceeccCCC-cccccccCCCC--------ChhH--------HHHHHHh-cchhhhhh------hcCCccCC
Q psy16243 324 QLKSFVHVSTAYSNCRQP-IIEERFYEPPV--------NPNH--------LIQITEL-LNDDMIDK------ITPGIVDY 379 (782)
Q Consensus 324 ~~~~fV~vST~~v~~~~~-~i~E~~~~~~~--------~~~~--------~~~~~~~-l~~~~~~~------~~p~~~~~ 379 (782)
++++|||+||++|||... .++|..|+++. ++++ +.+..++ ++++.++. +++....+
T Consensus 152 ~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (491)
T PLN02996 152 KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHG 231 (491)
T ss_pred CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCC
Confidence 899999999999998754 78898887654 4442 2222222 55555542 45555678
Q ss_pred CCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhc
Q psy16243 380 WPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGL 459 (782)
Q Consensus 380 ~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~ 459 (782)
+||+|+.||++||+++..+..++|++|+||++|+||+++|.| ||+++++++.+++.+++.
T Consensus 232 ~pn~Y~~TK~~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~--------------------gwi~~~~~~~~i~~~~~~ 291 (491)
T PLN02996 232 WPNTYVFTKAMGEMLLGNFKENLPLVIIRPTMITSTYKEPFP--------------------GWIEGLRTIDSVIVGYGK 291 (491)
T ss_pred CCCchHhhHHHHHHHHHHhcCCCCEEEECCCEeccCCcCCCC--------------------CcccchhhHHHHHHHhcc
Confidence 899999999999999998877999999999999999999988 888888888889999999
Q ss_pred CceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHH
Q psy16243 460 GLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFM 539 (782)
Q Consensus 460 g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~ 539 (782)
|..+.+.|++++.+|+|||||||++++.+++..... ...+++||++++..++++|.+++
T Consensus 292 g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~---------------------~~~~~vYNi~s~~~~~~s~~ei~ 350 (491)
T PLN02996 292 GKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGG---------------------QGSEIIYHVGSSLKNPVKFSNLH 350 (491)
T ss_pred ceEeEEecCCCeecceecccHHHHHHHHHHHHhhcc---------------------CCCCcEEEecCCCCCcccHHHHH
Confidence 999999999999999999999999999998763100 12467999999888899999999
Q ss_pred HHHHhcccccCCC----cceeceeeEeccchHHHHHHHHHHHHHHHHHHHHHHH--HcCCchhHHHHHHHHHHHhhhhhc
Q psy16243 540 ALNEKAVPEIPST----FAIWAYCFTLNKYKSIHKLYILFLHLLPALIVDTAAK--LMGRQPKLLDAYQKIHKFSEVISF 613 (782)
Q Consensus 540 ~~i~~~~~~~p~~----~~~~~~~~~~~~~~~~~~l~~~~~~~lpa~~~d~~~~--l~G~~p~~~k~~~ki~~~~~~~~~ 613 (782)
+.+.+.++.+|+. ..+|+|.+.++++.+.|.+..++.|.+|+++.|.+.. ..|++|++.|+++|+..+
T Consensus 351 ~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 424 (491)
T PLN02996 351 DFAYRYFSKNPWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKALQLVNIILPKRYGDKYTDLNRKIKLV------ 424 (491)
T ss_pred HHHHHHhhhCCCcCCCCCeEeeCCceecCcHHHHHHHHHHHHHhHHHHHHHHHHHhhhccChHHHHHHHHHHHH------
Confidence 9999999999987 5999999999999999999999999999999988877 677999999999998443
Q ss_pred cccccccccccchHHHHhhcCHHHHhhhccccccccccccccchhhhhhHhHHHHHHHHHHHHhhhhcccccceeeEEee
Q psy16243 614 FSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQLGSFEVHSTLNTLVSTRSLKLLDAYQKIHKFSEVISFFSTQQFTFT 693 (782)
Q Consensus 614 f~~~~w~f~~~n~~~L~~~l~~~Dr~~F~fd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~f~ 693 (782)
++++++|+|||+++|+|+
T Consensus 425 --------------------------------------------------------------~~~~~~~~~f~~~~w~f~ 442 (491)
T PLN02996 425 --------------------------------------------------------------MRLVDLYKPYVFFKGIFD 442 (491)
T ss_pred --------------------------------------------------------------HHHHHHhhccccceEEEc
Confidence 122334999999999999
Q ss_pred cchHHHHHhhcCccc---ccccccCCCCCCHHHHHHH-HHHHHHHHhcC
Q psy16243 694 NFNTQRLYTKMTEED---RALFNFDMSQLDWEKYMFW-HIRGIRAYLVK 738 (782)
Q Consensus 694 ~~n~~~l~~~~~~~d---~~~f~~~~~~~~w~~y~~~-~~~G~~~y~~k 738 (782)
++|+++||+.|+++| |++|+||++.+||++|+++ |++|+|+|++|
T Consensus 443 ~~n~~~l~~~~~~~d~~d~~~f~~d~~~~~w~~y~~~~~~~g~~~y~~k 491 (491)
T PLN02996 443 DTNTEKLRIKRKETGKEEADMFDFDPKSIDWEDYMTNVHIPGLVKYVLK 491 (491)
T ss_pred cHHHHHHHHHCCccccccccEeccCcccCCHHHHHHHhhHHHHHHHhcC
Confidence 999999999999955 9999999999999999998 99999999987
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-65 Score=586.62 Aligned_cols=447 Identities=26% Similarity=0.394 Sum_probs=371.3
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHH-Hhhcccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAK-EMKQLKFFDPM 248 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~-~~~~~~~f~~l 248 (782)
..+.+|.|+|||.+|+.|..+ ++.|+. ..++..+||+|+|.+++.++++|++ ++++.++|+++
T Consensus 115 ~f~~~k~VlVTGaTGFLGk~L----lekLLr------------~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l 178 (605)
T PLN02503 115 EFLRGKNFLITGATGFLAKVL----IEKILR------------TNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCL 178 (605)
T ss_pred hhhcCCEEEEcCCchHHHHHH----HHHHHH------------hCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHH
Confidence 346799999999444444333 233321 1244679999999999999999995 77788899988
Q ss_pred cccCccc-----ccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHcc
Q psy16243 249 RKRCPHY-----LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMK 323 (782)
Q Consensus 249 ~~~~~~~-----~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~ 323 (782)
++..+.. ..|++++.||+++++|||++++++.+.+++|+|||+||.++++.+++.+.++|+.||.+++++|++++
T Consensus 179 ~~~~g~~~~~~~~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~ 258 (605)
T PLN02503 179 QETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCK 258 (605)
T ss_pred HHhcCccccccccccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8766642 57999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCceEEEEecceeccCCC-cccccccC-------------------CCCChhHHHHHH----H--hcchhhhhh-----h
Q psy16243 324 QLKSFVHVSTAYSNCRQP-IIEERFYE-------------------PPVNPNHLIQIT----E--LLNDDMIDK-----I 372 (782)
Q Consensus 324 ~~~~fV~vST~~v~~~~~-~i~E~~~~-------------------~~~~~~~~~~~~----~--~l~~~~~~~-----~ 372 (782)
++++|||+||++|||... .+.|+.|+ ++.|+++.+++. + ..+++..+. +
T Consensus 259 ~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~ 338 (605)
T PLN02503 259 KLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGL 338 (605)
T ss_pred CCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhccc
Confidence 889999999999999874 89999997 566888888776 2 122233333 6
Q ss_pred cCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhh
Q psy16243 373 TPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTG 452 (782)
Q Consensus 373 ~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~ 452 (782)
++....+|||+|++||++||+++.++..++|++|+||++|.+++++|+| ||.++......
T Consensus 339 ~~~~~~~~pNtYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~p--------------------Gw~d~~~~~~p 398 (605)
T PLN02503 339 ERAKLYGWQDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFP--------------------GWMEGNRMMDP 398 (605)
T ss_pred chhhhCCCCChHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCcc--------------------ccccCccccch
Confidence 6778899999999999999999998888999999999999999999999 55555222223
Q ss_pred HHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCc
Q psy16243 453 IVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKP 532 (782)
Q Consensus 453 ~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~ 532 (782)
.+..+++|.++.++++++...|+||||.|+|+++++++..... ....+++||++++..+|
T Consensus 399 ~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~--------------------~~~~~~vYn~ts~~~nP 458 (605)
T PLN02503 399 IVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGA--------------------AKPEINVYQIASSVVNP 458 (605)
T ss_pred hhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhcc--------------------cCCCCCEEEeCCCCCCC
Confidence 3344468999999999999999999999999999996542111 11357899999998899
Q ss_pred ccHHHHHHHHHhcccccCCCcceeceeeEeccchHHHHHHHHHHHHHHHHHHHHHHHHc-----CCchhHHHHHHHHHHH
Q psy16243 533 IKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKLYILFLHLLPALIVDTAAKLM-----GRQPKLLDAYQKIHKF 607 (782)
Q Consensus 533 ~t~~el~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~lpa~~~d~~~~l~-----G~~p~~~k~~~ki~~~ 607 (782)
++|+++.+.+.+++.++|+....|+|. ..+.+++.+.+..+++|+ +.|...++. |++|++.+.++|+++
T Consensus 459 ~t~~~~~~~~~~~~~~~P~~~~~~~~~-~~~~~~~~~~~~~~~~h~----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~- 532 (605)
T PLN02503 459 LVFQDLARLLYEHYKSSPYMDSKGRPI-HVPPMKLFSSMEDFSSHL----WRDALLRSGLAGMSSSDRKLSQKLENICA- 532 (605)
T ss_pred eEHHHHHHHHHHHHhhCCcccccCcce-eccCceehhhHHHHHHHH----HHHHHHHHhhhcccccChHHHHHHHHHHH-
Confidence 999999999999999999999999987 457788888888888886 455555553 478887777766642
Q ss_pred hhhhhccccccccccccchHHHHhhcCHHHHhhhccccccccccccccchhhhhhHhHHHHHHHHHHHHhhhhcccccce
Q psy16243 608 SEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQLGSFEVHSTLNTLVSTRSLKLLDAYQKIHKFSEVISFFST 687 (782)
Q Consensus 608 ~~~~~~f~~~~w~f~~~n~~~L~~~l~~~Dr~~F~fd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 687 (782)
+.++++++++++|+|||+
T Consensus 533 --------------------------------------------------------------k~~~~~~~~~~~~~~ft~ 550 (605)
T PLN02503 533 --------------------------------------------------------------KSVEQAKYLASIYEPYTF 550 (605)
T ss_pred --------------------------------------------------------------HHHHHHHHHHHHHhhhee
Confidence 235667888899999999
Q ss_pred eeEEeecchHHHHHhhcCcccccccccCCCCCCHHHHHHH-HHHHHHHHhcCCC
Q psy16243 688 QQFTFTNFNTQRLYTKMTEEDRALFNFDMSQLDWEKYMFW-HIRGIRAYLVKDP 740 (782)
Q Consensus 688 ~~~~f~~~n~~~l~~~~~~~d~~~f~~~~~~~~w~~y~~~-~~~G~~~y~~ke~ 740 (782)
++|+|+++|+++|+++|+++||+.|+||++.|||++|+++ |++|+|+|++|+.
T Consensus 551 ~~w~F~~~n~~~L~~~ms~~Dr~~F~~D~~~idW~~Y~~~~~i~G~rky~lk~~ 604 (605)
T PLN02503 551 YGGRFDNSNTQRLMERMSEEEKAEFGFDVGSIDWRDYITNVHIPGLRRHVMKGR 604 (605)
T ss_pred CeEEEechHHHHHHHhCCHHHhhccCCCcCCCCHHHHHHHhhhhHHHHHHhccC
Confidence 9999999999999999999999999999999999999997 9999999999985
|
|
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=317.04 Aligned_cols=168 Identities=29% Similarity=0.509 Sum_probs=146.2
Q ss_pred ccccceeeecCcCccCCCCCCccccCc---eeEEEecccc------------ccccccccccC----CCCCCeEEEEecc
Q psy16243 13 RFEEIFEGEGLSGILSLGLNLNQKSGP---ISASKNSTAS------------LNSCLPGERLD----HYTTESFVHVSTA 73 (782)
Q Consensus 13 ~~~~~~~~~gd~~~~~~~~~~~~~~~~---v~~~i~~~~~------------~~~~~~~~~~~----~~~l~~f~hvsta 73 (782)
.++|+.++.|||++|++|+++.+++.+ |++||||||. .++...-+.+. |.+|++|+|||||
T Consensus 77 ~l~Kv~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTA 156 (467)
T KOG1221|consen 77 ALEKVVPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTA 156 (467)
T ss_pred ceecceeccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehh
Confidence 689999999999999999998877633 9999999997 22222222222 6699999999999
Q ss_pred cccCCCCCcceeccCCCC--ChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCCeEEEeCCCcc
Q psy16243 74 YSNCRQPIIEERFYEPPV--NPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSID 151 (782)
Q Consensus 74 ~~~~~~~~ide~~y~~g~--Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~ 151 (782)
|+||....++|.+|+.+. ++.+++++.+++++..++...|+++..|||||+++|++.|.+++++...+|.+|+||+++
T Consensus 157 y~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI 236 (467)
T KOG1221|consen 157 YSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSII 236 (467)
T ss_pred heecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCce
Confidence 999999999999999988 999999999999999999999999999999999999999999999989999999999999
Q ss_pred cccccccccccccccccCcccCCCeeEeeccccCCCCCC
Q psy16243 152 LGILFYSEQFFDPMRKRCPHYLSKMVAVTGDCLKPGVGI 190 (782)
Q Consensus 152 ~~~~~~~~~~f~~l~~~~p~~~~k~vlvTG~~~~~g~Gl 190 (782)
.+. ++++.|+|.+..--.+|.+-..|.|.
T Consensus 237 ~st----------~~EP~pGWidn~~gp~g~i~g~gkGv 265 (467)
T KOG1221|consen 237 TST----------YKEPFPGWIDNLNGPDGVIIGYGKGV 265 (467)
T ss_pred ecc----------ccCCCCCccccCCCCceEEEEeccce
Confidence 876 88899999988777777655556554
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-33 Score=290.93 Aligned_cols=222 Identities=31% Similarity=0.535 Sum_probs=143.9
Q ss_pred ceeeeeecccchhhHHHHHHHhhc-ccccccccccCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccC
Q psy16243 218 LKVAVSINLRATKALLEMAKEMKQ-LKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVR 296 (782)
Q Consensus 218 ~~i~~LvR~~~~~~~~erl~~~~~-~~~f~~l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~ 296 (782)
.+||||+|.++...+.+|+.+.+. ...++...+ ...+|++++.||+++++|||++++++++.+++|+||||||.++
T Consensus 23 ~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~---~~~~ri~~v~GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~ 99 (249)
T PF07993_consen 23 VKIYCLVRASSSQSALERLKDALKEYGLWDDLDK---EALSRIEVVEGDLSQPNLGLSDEDYQELAEEVDVIIHCAASVN 99 (249)
T ss_dssp TEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-H---HHTTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--SS-S
T ss_pred cEEEEEEeCcccccchhhhhhhcccccchhhhhh---hhhccEEEEeccccccccCCChHHhhccccccceeeecchhhh
Confidence 399999999988889999975543 333322110 2367999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceeccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCC
Q psy16243 297 FDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPG 375 (782)
Q Consensus 297 f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~ 375 (782)
|..+++++.++||.||++++++|.+. +.++|+|+||+++.+... .++|+.++. +.....
T Consensus 100 ~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~~~~~-------------------~~~~~~ 159 (249)
T PF07993_consen 100 FNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEKVYPE-------------------EEDDLD 159 (249)
T ss_dssp BS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SSS-HH-------------------H--EEE
T ss_pred hcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCccccccccc-------------------ccccch
Confidence 99999999999999999999999976 455999999988877654 444443210 000111
Q ss_pred ccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCccccccccc-chhh
Q psy16243 376 IVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHY-GPTG 452 (782)
Q Consensus 376 ~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~-~~~~ 452 (782)
....++|+|+.||++||+++.++. .|+|++|+|||+|+|. +.. ||.+... .+..
T Consensus 160 ~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~---~~~--------------------G~~~~~~~~~~~ 216 (249)
T PF07993_consen 160 PPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGD---SRT--------------------GWWNSDDFFPYL 216 (249)
T ss_dssp --TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-S---SSS--------------------S---TTBHHHHH
T ss_pred hhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCccccc---CCC--------------------ceeeccchHHHH
Confidence 233566999999999999999984 4999999999999994 333 4544444 4555
Q ss_pred HHHHhhcCceeeeccCCCccccccchhHHHHHH
Q psy16243 453 IVAGAGLGLLRSMHADPELVADMVPADNVINCI 485 (782)
Q Consensus 453 ~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~ai 485 (782)
+...+..|..+..+++++...|++|||.||++|
T Consensus 217 ~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 217 LRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp HHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred HHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 667777888888888888889999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=258.34 Aligned_cols=301 Identities=21% Similarity=0.190 Sum_probs=216.5
Q ss_pred eeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCccc
Q psy16243 176 MVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHY 255 (782)
Q Consensus 176 ~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~ 255 (782)
.|+||| |.|+.+ +|.+..++. .+++|.++.+...+.. +.
T Consensus 2 ~iLVtG-----GAGYIG---------SHtv~~Ll~-----~G~~vvV~DNL~~g~~--~~-------------------- 40 (329)
T COG1087 2 KVLVTG-----GAGYIG---------SHTVRQLLK-----TGHEVVVLDNLSNGHK--IA-------------------- 40 (329)
T ss_pred eEEEec-----CcchhH---------HHHHHHHHH-----CCCeEEEEecCCCCCH--HH--------------------
Confidence 689999 555532 222222222 2788888888755431 11
Q ss_pred ccc--eeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCchhhHH---HHHHhhHHHHHHHHHHHHHccCCceE
Q psy16243 256 LSK--MVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFDAHLK---VAVSINLRATKALLEMAKEMKQLKSF 328 (782)
Q Consensus 256 ~~k--v~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~~~~~---~~~~~Nv~gt~~Lle~a~~~~~~~~f 328 (782)
..+ +.+++||+.|. +.+++++++ +|.|||+||.....++.+ ++++.||.||.+|+++|++. ++++|
T Consensus 41 v~~~~~~f~~gDi~D~------~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~ 113 (329)
T COG1087 41 LLKLQFKFYEGDLLDR------ALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKF 113 (329)
T ss_pred hhhccCceEEeccccH------HHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEE
Confidence 112 68999999998 778888874 799999999987777654 68999999999999999998 89999
Q ss_pred EEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcE
Q psy16243 329 VHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPV 404 (782)
Q Consensus 329 V~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~ 404 (782)
||.||++|||.+. +|.|+.... +.|+||.||.+.|+++..+ ..++..
T Consensus 114 vFSStAavYG~p~~~PI~E~~~~~-----------------------------p~NPYG~sKlm~E~iL~d~~~a~~~~~ 164 (329)
T COG1087 114 IFSSTAAVYGEPTTSPISETSPLA-----------------------------PINPYGRSKLMSEEILRDAAKANPFKV 164 (329)
T ss_pred EEecchhhcCCCCCcccCCCCCCC-----------------------------CCCcchhHHHHHHHHHHHHHHhCCCcE
Confidence 9999999999876 777773221 2299999999999999988 458999
Q ss_pred EEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCcee--eecc------CCCcccccc
Q psy16243 405 AMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLR--SMHA------DPELVADMV 476 (782)
Q Consensus 405 ~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~--~~~~------~~~~~~d~V 476 (782)
+++|..++.|+..++.-| .|..+.+.....+..++.|... .+.| ||.+++|+|
T Consensus 165 v~LRYFN~aGA~~~G~iG-------------------e~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYI 225 (329)
T COG1087 165 VILRYFNVAGACPDGTLG-------------------QRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYI 225 (329)
T ss_pred EEEEecccccCCCCCccC-------------------CCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeee
Confidence 999999999987664433 3333333333455555566544 3444 588999999
Q ss_pred chhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc-CCCcce
Q psy16243 477 PADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI-PSTFAI 555 (782)
Q Consensus 477 pVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~-p~~~~~ 555 (782)
||.|+|++.+.|+..... .....+||++++ +..|..|+++.+.+..+.. |....-
T Consensus 226 HV~DLA~aH~~Al~~L~~----------------------~g~~~~~NLG~G--~G~SV~evi~a~~~vtg~~ip~~~~~ 281 (329)
T COG1087 226 HVDDLADAHVLALKYLKE----------------------GGSNNIFNLGSG--NGFSVLEVIEAAKKVTGRDIPVEIAP 281 (329)
T ss_pred ehhHHHHHHHHHHHHHHh----------------------CCceeEEEccCC--CceeHHHHHHHHHHHhCCcCceeeCC
Confidence 999999999999987521 123479999999 8999999999999988842 222222
Q ss_pred eceeeEeccchHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhccccccccccc
Q psy16243 556 WAYCFTLNKYKSIHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTN 623 (782)
Q Consensus 556 ~~~~~~~~~~~~~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~~~~~f~~~~w~f~~ 623 (782)
.++.- .+.. -...+++++.+||+|+.. .++.+++. +|.|+.
T Consensus 282 RR~GD----------pa~l------~Ad~~kA~~~Lgw~p~~~----~L~~ii~~-------aw~W~~ 322 (329)
T COG1087 282 RRAGD----------PAIL------VADSSKARQILGWQPTYD----DLEDIIKD-------AWDWHQ 322 (329)
T ss_pred CCCCC----------Ccee------EeCHHHHHHHhCCCcccC----CHHHHHHH-------HHHHhh
Confidence 22211 0000 012478899999999843 44555554 677766
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=248.25 Aligned_cols=265 Identities=19% Similarity=0.156 Sum_probs=205.9
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCchhh---HHHHHHhhHHHHHHHHHHHHHccCCceEEEE
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFDAH---LKVAVSINLRATKALLEMAKEMKQLKSFVHV 331 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~~~---~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~v 331 (782)
++..|++|||++. +.+.++++ ++|+|+|.||..+.+.+ +..++++||.||.+|||++++.....+|+||
T Consensus 51 ~~~~fv~~DI~D~------~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HI 124 (340)
T COG1088 51 PRYRFVQGDICDR------ELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHI 124 (340)
T ss_pred CCceEEeccccCH------HHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEe
Confidence 5899999999998 88899998 48999999999877755 4579999999999999999998434599999
Q ss_pred ecceeccCCC----cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEE
Q psy16243 332 STAYSNCRQP----IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVA 405 (782)
Q Consensus 332 ST~~v~~~~~----~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~ 405 (782)
||..|||+.. ...|+ +|--| .++|..||+.+..+++++ ..|+|++
T Consensus 125 STDEVYG~l~~~~~~FtE~--------------------------tp~~P---sSPYSASKAasD~lVray~~TYglp~~ 175 (340)
T COG1088 125 STDEVYGDLGLDDDAFTET--------------------------TPYNP---SSPYSASKAASDLLVRAYVRTYGLPAT 175 (340)
T ss_pred ccccccccccCCCCCcccC--------------------------CCCCC---CCCcchhhhhHHHHHHHHHHHcCCceE
Confidence 9999999743 22333 11111 289999999999999999 3599999
Q ss_pred EecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHH
Q psy16243 406 MVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCI 485 (782)
Q Consensus 406 IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~ai 485 (782)
|.|+++-|||.+.|-. ++| .++..++.|....++|+|.+++||++|+|-++|+
T Consensus 176 ItrcSNNYGPyqfpEK-----------------lIP----------~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai 228 (340)
T COG1088 176 ITRCSNNYGPYQFPEK-----------------LIP----------LMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAI 228 (340)
T ss_pred EecCCCCcCCCcCchh-----------------hhH----------HHHHHHHcCCCCceecCCcceeeeEEeHhHHHHH
Confidence 9999999999998754 233 5778889999999999999999999999999999
Q ss_pred HHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCcceeceeeEeccc
Q psy16243 486 ISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKY 565 (782)
Q Consensus 486 i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~~~~~~~~~~~~~ 565 (782)
...+.+ +..+++||++++ +..+--|+++.+.+.+++.... ..-.+.+..-
T Consensus 229 ~~Vl~k-------------------------g~~GE~YNIgg~--~E~~Nlevv~~i~~~l~~~~~~---~~~li~~V~D 278 (340)
T COG1088 229 DLVLTK-------------------------GKIGETYNIGGG--NERTNLEVVKTICELLGKDKPD---YRDLITFVED 278 (340)
T ss_pred HHHHhc-------------------------CcCCceEEeCCC--ccchHHHHHHHHHHHhCccccc---hhhheEeccC
Confidence 988865 356999999999 8899999999999998875432 1111222233
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhcccccccccccc
Q psy16243 566 KSIHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNF 624 (782)
Q Consensus 566 ~~~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~~~~~f~~~~w~f~~~ 624 (782)
+.-|... =++-..++.+.+||+|. ...-.-+++ .+++|..|+|.|..-
T Consensus 279 RpGHD~R-------Yaid~~Ki~~eLgW~P~-~~fe~Glrk---Tv~WY~~N~~Ww~~l 326 (340)
T COG1088 279 RPGHDRR-------YAIDASKIKRELGWRPQ-ETFETGLRK---TVDWYLDNEWWWEPL 326 (340)
T ss_pred CCCCccc-------eeechHHHhhhcCCCcC-CCHHHHHHH---HHHHHHhchHHHhhh
Confidence 3334321 12334677889999994 344444444 456799999987643
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-28 Score=255.47 Aligned_cols=287 Identities=21% Similarity=0.272 Sum_probs=198.6
Q ss_pred CeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCcc
Q psy16243 175 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPH 254 (782)
Q Consensus 175 k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~ 254 (782)
+.|++||.+|+.|.++ +.+|+.+. ..+|+||+|.++.+.+.+|+++..+ .|....+ .
T Consensus 1 ~~vlLTGATGFLG~yL----l~eLL~~~--------------~~kv~cLVRA~s~E~a~~RL~~~~~--~~~~~~e---~ 57 (382)
T COG3320 1 RNVLLTGATGFLGAYL----LLELLDRS--------------DAKVICLVRAQSDEAALARLEKTFD--LYRHWDE---L 57 (382)
T ss_pred CeEEEecCchHhHHHH----HHHHHhcC--------------CCcEEEEEecCCHHHHHHHHHHHhh--hhhhhhh---h
Confidence 4689999766666655 34454332 3789999999999999999998776 2222222 3
Q ss_pred cccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecc
Q psy16243 255 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTA 334 (782)
Q Consensus 255 ~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~ 334 (782)
..++|+++.||+++++|||++.+++.|.++||.|||+||.+++-.++++....||.||..++++|... +.|.|+||||+
T Consensus 58 ~~~ri~vv~gDl~e~~lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsi 136 (382)
T COG3320 58 SADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSI 136 (382)
T ss_pred hcceEEEEecccccccCCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeee
Confidence 46799999999999999999999999999999999999999999999999999999999999999985 78999999999
Q ss_pred eeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-CCCCcEEEecCCeEE
Q psy16243 335 YSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-GAGMPVAMVRPSIVI 413 (782)
Q Consensus 335 ~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-~~glp~~IvRp~~v~ 413 (782)
+|......-..+.-. + +..+ +...-..++++|+.|||+||.+++++ ..|+|++|+|||.|.
T Consensus 137 sv~~~~~~~~~~~~~---------------~-~~~~--~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~ 198 (382)
T COG3320 137 SVGETEYYSNFTVDF---------------D-EISP--TRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYIT 198 (382)
T ss_pred eeccccccCCCcccc---------------c-cccc--cccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeee
Confidence 998653211111000 0 0000 01112345699999999999999999 459999999999999
Q ss_pred eccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHh-hcCceeeeccCCCccccccchhHHHHHHHHhhhhc
Q psy16243 414 ATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGA-GLGLLRSMHADPELVADMVPADNVINCIISAAWNV 492 (782)
Q Consensus 414 G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 492 (782)
|+.+++. +|.. .| ...++.++ ..|..| +.....|.+|+|.++.++.......
T Consensus 199 gds~tG~--------------~n~~---D~------~~Rlv~~~~~lg~~P----~~~~~~~~~p~~~v~~~v~~~~~~~ 251 (382)
T COG3320 199 GDSRTGA--------------LNTR---DF------LTRLVLGLLQLGIAP----DSEYSLDMLPVDHVARAVVAPSVQV 251 (382)
T ss_pred ccCccCc--------------cccc---hH------HHHHHHHHHHhCCCC----CcccchhhCccceeeEEeehhhhhH
Confidence 9877531 1111 22 22333333 345443 4566778888888887766655443
Q ss_pred cccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHh
Q psy16243 493 HQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEK 544 (782)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~ 544 (782)
+.. . ..... .| ......|+ .++....+...++.+...+
T Consensus 252 ~~~-~---~~l~~--------~~-~~~f~~~~-~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 252 AEA-I---AALGA--------HS-DIRFNQLH-MLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred HHH-H---HHhcc--------Cc-cchhhhee-cccCCCccchhHHHHhHhh
Confidence 210 0 00000 00 11223444 2333377888888887776
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-26 Score=249.66 Aligned_cols=264 Identities=18% Similarity=0.114 Sum_probs=185.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
|..+.|+|||.+|+.|..+ .+.|... +.+|+++.|...+.. ..+...... ..
T Consensus 13 ~~~~~vlVtGatGfiG~~l----v~~L~~~---------------g~~V~~~d~~~~~~~--~~~~~~~~~--~~----- 64 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGL----LEELLFL---------------NQTVIGLDNFSTGYQ--HNLDDVRTS--VS----- 64 (348)
T ss_pred ccCCEEEEECCccHHHHHH----HHHHHHC---------------CCEEEEEeCCCCcch--hhhhhhhhc--cc-----
Confidence 5568899999554444444 2333221 457888887543211 111111100 00
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceE
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSF 328 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~f 328 (782)
.....++.++.||+++. +.+..+++++|+|||+||..... .......++|+.||.+++++|++. ++++|
T Consensus 65 -~~~~~~~~~~~~Di~d~------~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~ 136 (348)
T PRK15181 65 -EEQWSRFIFIQGDIRKF------TDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSF 136 (348)
T ss_pred -cccCCceEEEEccCCCH------HHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeE
Confidence 01124788999999987 78889999999999999975432 344567899999999999999997 89999
Q ss_pred EEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcE
Q psy16243 329 VHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPV 404 (782)
Q Consensus 329 V~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~ 404 (782)
||+||+.+||... +..|+. +. .+.+.|+.||.++|.++..+ ..++++
T Consensus 137 v~~SS~~vyg~~~~~~~~e~~--------------------------~~---~p~~~Y~~sK~~~e~~~~~~~~~~~~~~ 187 (348)
T PRK15181 137 TYAASSSTYGDHPDLPKIEER--------------------------IG---RPLSPYAVTKYVNELYADVFARSYEFNA 187 (348)
T ss_pred EEeechHhhCCCCCCCCCCCC--------------------------CC---CCCChhhHHHHHHHHHHHHHHHHhCCCE
Confidence 9999999998532 222221 11 11268999999999999876 358999
Q ss_pred EEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHH
Q psy16243 405 AMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINC 484 (782)
Q Consensus 405 ~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~a 484 (782)
+++||++||||...+.. .. . .....++..+..|....+.+++++.+|++||||+|++
T Consensus 188 ~~lR~~~vyGp~~~~~~--------------------~~-~--~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a 244 (348)
T PRK15181 188 IGLRYFNVFGRRQNPNG--------------------AY-S--AVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQA 244 (348)
T ss_pred EEEEecceeCcCCCCCC--------------------cc-c--cCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHH
Confidence 99999999998754321 00 0 0111355556667666678899999999999999999
Q ss_pred HHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccc
Q psy16243 485 IISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVP 547 (782)
Q Consensus 485 ii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~ 547 (782)
++.++.... ....+++||++++ +++|++|+++.+.+..+
T Consensus 245 ~~~~~~~~~----------------------~~~~~~~yni~~g--~~~s~~e~~~~i~~~~~ 283 (348)
T PRK15181 245 NLLSATTND----------------------LASKNKVYNVAVG--DRTSLNELYYLIRDGLN 283 (348)
T ss_pred HHHHHhccc----------------------ccCCCCEEEecCC--CcEeHHHHHHHHHHHhC
Confidence 987764320 0124689999999 88999999999988775
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=231.70 Aligned_cols=211 Identities=22% Similarity=0.237 Sum_probs=164.1
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch--hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecce
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD--AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAY 335 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~ 335 (782)
...++.|||+++ +++.++++++|+|||+||.+... .+.+.++++||.||++++++|++. ++++|||+||++
T Consensus 46 ~~~~~~~Di~d~------~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~ 118 (280)
T PF01073_consen 46 VKEYIQGDITDP------ESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSIS 118 (280)
T ss_pred ceeEEEeccccH------HHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcc
Confidence 334999999998 89999999999999999987664 356779999999999999999997 899999999999
Q ss_pred eccC---CCcc---cccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCC-------CC
Q psy16243 336 SNCR---QPII---EERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGA-------GM 402 (782)
Q Consensus 336 v~~~---~~~i---~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~-------gl 402 (782)
|++. ..++ +|... .+..+.+.|+.||++||+++.++.. .+
T Consensus 119 vv~~~~~~~~~~~~dE~~~---------------------------~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l 171 (280)
T PF01073_consen 119 VVFDNYKGDPIINGDEDTP---------------------------YPSSPLDPYAESKALAEKAVLEANGSELKNGGRL 171 (280)
T ss_pred eeEeccCCCCcccCCcCCc---------------------------ccccccCchHHHHHHHHHHHHhhcccccccccce
Confidence 8876 2222 22210 0112347999999999999998832 48
Q ss_pred cEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHH
Q psy16243 403 PVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVI 482 (782)
Q Consensus 403 p~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva 482 (782)
.++++||+.||||...... ..+...+..|......|++....|+++|++||
T Consensus 172 ~t~~lRP~~IyGp~d~~~~-----------------------------~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA 222 (280)
T PF01073_consen 172 RTCALRPAGIYGPGDQRLV-----------------------------PRLVKMVRSGLFLFQIGDGNNLFDFVYVENVA 222 (280)
T ss_pred eEEEEeccEEeCccccccc-----------------------------chhhHHHHhcccceeecCCCceECcEeHHHHH
Confidence 9999999999998643211 02444455565666778888999999999999
Q ss_pred HHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCccc-HHHHHHHHHhcccccC
Q psy16243 483 NCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIK-WKEFMALNEKAVPEIP 550 (782)
Q Consensus 483 ~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t-~~el~~~i~~~~~~~p 550 (782)
.+++.|+...... +.+....++.|+++++ +|++ +.++...+.+.+|..+
T Consensus 223 ~ahvlA~~~L~~~-----------------~~~~~~~G~~y~itd~--~p~~~~~~f~~~~~~~~G~~~ 272 (280)
T PF01073_consen 223 HAHVLAAQALLEP-----------------GKPERVAGQAYFITDG--EPVPSFWDFMRPLWEALGYPP 272 (280)
T ss_pred HHHHHHHHHhccc-----------------cccccCCCcEEEEECC--CccCcHHHHHHHHHHHCCCCC
Confidence 9999998654211 0123467899999999 8999 9999999988888654
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=257.05 Aligned_cols=154 Identities=19% Similarity=0.288 Sum_probs=119.6
Q ss_pred cccceeeecCcCccCCCCCCcccc---CceeEEEecccc---------------ccccccccccC-CCCCCeEEEEeccc
Q psy16243 14 FEEIFEGEGLSGILSLGLNLNQKS---GPISASKNSTAS---------------LNSCLPGERLD-HYTTESFVHVSTAY 74 (782)
Q Consensus 14 ~~~~~~~~gd~~~~~~~~~~~~~~---~~v~~~i~~~~~---------------~~~~~~~~~~~-~~~l~~f~hvsta~ 74 (782)
.+|+.++.||+.+|++||+++.+. ..|++||||||. .++..+.+.+. +.++++|+|+||+|
T Consensus 191 ~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTay 270 (605)
T PLN02503 191 LSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAY 270 (605)
T ss_pred cccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCce
Confidence 578999999999999999987544 239999999996 22222222222 55789999999999
Q ss_pred ccCCC-CCcceeccCC-------------------CCChhhHHHHH----H--hcchhhhh-----hhccCccccCCccc
Q psy16243 75 SNCRQ-PIIEERFYEP-------------------PVNPNHLIQIT----E--LLNDDMID-----KITPGIVDYWPNTY 123 (782)
Q Consensus 75 ~~~~~-~~ide~~y~~-------------------g~Ds~~~~~l~----~--~L~~~~~~-----~~~p~li~~~Pnt~ 123 (782)
++++. ..++|++|+. .+|+.+.++++ + ..++...+ .+++.+++.|||||
T Consensus 271 VyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtY 350 (605)
T PLN02503 271 VNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTY 350 (605)
T ss_pred eecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChH
Confidence 99987 4899999973 35788877776 1 11112222 26678999999999
Q ss_pred hhhHHHHHHHHHhcCCCCeEEEeCCCcccccccccccccccccccCcccCCCee
Q psy16243 124 ALTKQVAEDMVRRGGAGMPVAMVRPSIDLGILFYSEQFFDPMRKRCPHYLSKMV 177 (782)
Q Consensus 124 ~l~k~L~E~Ll~~~~~~~~~~ivRps~~~~~~~~~~~~f~~l~~~~p~~~~k~v 177 (782)
+++|+++|.++.+...+.|++++||+++.+. ++++.|+|.+...
T Consensus 351 t~TK~lAE~lV~~~~~~LPv~IvRPsiV~st----------~~eP~pGw~d~~~ 394 (605)
T PLN02503 351 VFTKAMGEMVINSMRGDIPVVIIRPSVIEST----------WKDPFPGWMEGNR 394 (605)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEcCCEeccc----------ccCCccccccCcc
Confidence 9999999999998777899999999999875 8889999987643
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-24 Score=278.44 Aligned_cols=382 Identities=17% Similarity=0.212 Sum_probs=242.0
Q ss_pred CCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCccc-----
Q psy16243 80 PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDL----- 152 (782)
Q Consensus 80 ~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~----- 152 (782)
...+++||+.|+||++++++++.+++.....++...++.+|+...+++.+.+..-... .........+.....
T Consensus 868 i~~~~~ff~lGgdSL~a~~l~~~l~~~~~~~l~~~~i~~~~ti~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 947 (1389)
T TIGR03443 868 ISPDDSFFDLGGHSILATRMIFELRKKLNVELPLGLIFKSPTIKGFAKEVDRLKKGEELADEGDSEIEEEETVLELDYAK 947 (1389)
T ss_pred cCcCcchhhcCccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhhhcccccccccccccchhcccccchhhh
Confidence 4668899999999999999999999887767778889999999888876643221110 000000000000000
Q ss_pred ccccccccccccccc--cCcccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchh
Q psy16243 153 GILFYSEQFFDPMRK--RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATK 230 (782)
Q Consensus 153 ~~~~~~~~~f~~l~~--~~p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~ 230 (782)
....+...+...... ..+.-..+.|+|||.+|+.|..+ .+.|+..- .....+|+|++|..+..
T Consensus 948 ~~~~l~~~~~~~~~~~~~~~~~~~~~VlvTGatGflG~~l----~~~Ll~~~-----------~~~~~~V~~l~R~~~~~ 1012 (1389)
T TIGR03443 948 DAKTLVDSLPKSYPSRKELDASTPITVFLTGATGFLGSFI----LRDLLTRR-----------SNSNFKVFAHVRAKSEE 1012 (1389)
T ss_pred hhhhhhhcccccCCcccccccCCCceEEEeCCccccHHHH----HHHHHhcC-----------CCCCcEEEEEECcCChH
Confidence 000000000000000 01112357899999655555444 23332210 01257899999987666
Q ss_pred hHHHHHHHhhcccccccccccCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHH
Q psy16243 231 ALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLR 310 (782)
Q Consensus 231 ~~~erl~~~~~~~~f~~l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~ 310 (782)
...+++.+..... ... .+....+++++.||++++.+||+++.+.++.+++|+|||+||.+++..++..+...|+.
T Consensus 1013 ~~~~~l~~~~~~~--~~~---~~~~~~~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~ 1087 (1389)
T TIGR03443 1013 AGLERLRKTGTTY--GIW---DEEWASRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVI 1087 (1389)
T ss_pred HHHHHHHHHHHHh--CCC---chhhhcceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHH
Confidence 6666665443211 100 11234589999999999999999999999999999999999999988888888889999
Q ss_pred HHHHHHHHHHHccCCceEEEEecceeccCCCccc--ccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHH
Q psy16243 311 ATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIE--ERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTK 388 (782)
Q Consensus 311 gt~~Lle~a~~~~~~~~fV~vST~~v~~~~~~i~--E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK 388 (782)
||.+++++|++. ++++|+|+||.++++...... +........ ...++. . .........++|+.||
T Consensus 1088 gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~---------~~~e~~--~-~~~~~~~~~~~Y~~sK 1154 (1389)
T TIGR03443 1088 GTINVLNLCAEG-KAKQFSFVSSTSALDTEYYVNLSDELVQAGGA---------GIPESD--D-LMGSSKGLGTGYGQSK 1154 (1389)
T ss_pred HHHHHHHHHHhC-CCceEEEEeCeeecCcccccchhhhhhhccCC---------CCCccc--c-cccccccCCCChHHHH
Confidence 999999999986 789999999999986432111 100000000 000000 0 0011122347899999
Q ss_pred HHHHHHHHHc-CCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHh-hcCceeeec
Q psy16243 389 QVAEDMVRRG-GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGA-GLGLLRSMH 466 (782)
Q Consensus 389 ~~aE~ll~~~-~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~-~~g~~~~~~ 466 (782)
+++|.++..+ ..|++++|+||++|+|+...+.. |.. .|.. .++.+. ..|..
T Consensus 1155 ~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~--------------~~~---~~~~------~~~~~~~~~~~~---- 1207 (1389)
T TIGR03443 1155 WVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGAT--------------NTD---DFLL------RMLKGCIQLGLI---- 1207 (1389)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCccccCCCcCCC--------------Cch---hHHH------HHHHHHHHhCCc----
Confidence 9999999887 45999999999999998654311 110 1111 122221 22322
Q ss_pred cCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhc
Q psy16243 467 ADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKA 545 (782)
Q Consensus 467 ~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~ 545 (782)
++....+|++|||+++++++.++.... ......+||++++ .+++|.++++.+.+.
T Consensus 1208 p~~~~~~~~~~Vddva~ai~~~~~~~~----------------------~~~~~~i~~~~~~--~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443 1208 PNINNTVNMVPVDHVARVVVAAALNPP----------------------KESELAVAHVTGH--PRIRFNDFLGTLKTY 1262 (1389)
T ss_pred CCCCCccccccHHHHHHHHHHHHhCCc----------------------ccCCCCEEEeCCC--CCCcHHHHHHHHHHh
Confidence 234557899999999999998875421 0123569999988 789999999999764
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=218.79 Aligned_cols=256 Identities=23% Similarity=0.198 Sum_probs=188.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
|..+.++|||.+|+.|+.++ ..+ ++..+..+..++....=... +..+++.
T Consensus 4 ~~~~~vlItgg~gfi~Sn~~----~~~-------------~~~~p~~~~v~idkL~~~s~-~~~l~~~------------ 53 (331)
T KOG0747|consen 4 YKEKNVLITGGAGFIGSNFI----NYL-------------VDKYPDYKFVNLDKLDYCSN-LKNLEPV------------ 53 (331)
T ss_pred CccceEEEecCcCcchhhhh----hhc-------------ccCCCCCcEEEEeecccccc-cchhhhh------------
Confidence 45589999995555555441 111 23344455555544321111 2223322
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh--cCceEEEEcCcccCchhhH---HHHHHhhHHHHHHHHHHHHHccCCc
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV--DNIHVVFHCAATVRFDAHL---KVAVSINLRATKALLEMAKEMKQLK 326 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~--~~vdiViH~Aa~v~f~~~~---~~~~~~Nv~gt~~Lle~a~~~~~~~ 326 (782)
....+..++++|+.+. .....++ +++|.|+|.||....+.+. -++.+.|+.+|..|++.++..++++
T Consensus 54 --~n~p~ykfv~~di~~~------~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~ 125 (331)
T KOG0747|consen 54 --RNSPNYKFVEGDIADA------DLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIR 125 (331)
T ss_pred --ccCCCceEeeccccch------HHHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCee
Confidence 2345789999999987 3333333 3589999999987665443 3577899999999999999999999
Q ss_pred eEEEEecceeccCCC--ccc-ccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CC
Q psy16243 327 SFVHVSTAYSNCRQP--IIE-ERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AG 401 (782)
Q Consensus 327 ~fV~vST~~v~~~~~--~i~-E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~g 401 (782)
+|||+||..|||+.. .+. |...+ . +.|+|+.||++||++++++. -+
T Consensus 126 ~fvhvSTdeVYGds~~~~~~~E~s~~--------------------------n---PtnpyAasKaAaE~~v~Sy~~sy~ 176 (331)
T KOG0747|consen 126 RFVHVSTDEVYGDSDEDAVVGEASLL--------------------------N---PTNPYAASKAAAEMLVRSYGRSYG 176 (331)
T ss_pred EEEEecccceecCccccccccccccC--------------------------C---CCCchHHHHHHHHHHHHHHhhccC
Confidence 999999999999864 222 33211 1 22999999999999999994 59
Q ss_pred CcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHH
Q psy16243 402 MPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNV 481 (782)
Q Consensus 402 lp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdv 481 (782)
+|++++|.++||||.+.|.. ++| .++..+..|....+.|+|...+.|+||+|+
T Consensus 177 lpvv~~R~nnVYGP~q~~~k-----------------lip----------kFi~l~~~~~~~~i~g~g~~~rs~l~veD~ 229 (331)
T KOG0747|consen 177 LPVVTTRMNNVYGPNQYPEK-----------------LIP----------KFIKLAMRGKEYPIHGDGLQTRSYLYVEDV 229 (331)
T ss_pred CcEEEEeccCccCCCcChHH-----------------HhH----------HHHHHHHhCCCcceecCcccceeeEeHHHH
Confidence 99999999999999876643 122 566666677777899999999999999999
Q ss_pred HHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 482 INCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 482 a~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
++++-++..+ ++.+++||+++. .+.+..|+++.+.+.+.+
T Consensus 230 ~ea~~~v~~K-------------------------g~~geIYNIgtd--~e~~~~~l~k~i~eli~~ 269 (331)
T KOG0747|consen 230 SEAFKAVLEK-------------------------GELGEIYNIGTD--DEMRVIDLAKDICELFEK 269 (331)
T ss_pred HHHHHHHHhc-------------------------CCccceeeccCc--chhhHHHHHHHHHHHHHH
Confidence 9999888865 246899999998 889999999988887654
|
|
| >PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-25 Score=195.57 Aligned_cols=94 Identities=43% Similarity=0.887 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhccccccccccccchHHHHhhcCHHHHhhhccccccccccccc
Q psy16243 575 FLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQLGSFEVH 654 (782)
Q Consensus 575 ~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~~~~~f~~~~w~f~~~n~~~L~~~l~~~Dr~~F~fd~~~~~~~~~~ 654 (782)
++|.+||++.|.+.++.|+||+++++|+|++++.++
T Consensus 1 ~~h~lPA~~~D~~~~l~g~kp~~~k~~~ki~~~~~~-------------------------------------------- 36 (94)
T PF03015_consen 1 LFHFLPAYLLDLILRLFGQKPRMVKIYRKIRKALEV-------------------------------------------- 36 (94)
T ss_pred CcchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH--------------------------------------------
Confidence 358899999999999999999999999999999888
Q ss_pred cchhhhhhHhHHHHHHHHHHHHhhhhcccccceeeEEeecchHHHHHhhcCcccccccccCCCCCCHHHHHHHHHHHHHH
Q psy16243 655 STLNTLVSTRSLKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQLDWEKYMFWHIRGIRA 734 (782)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~f~~~n~~~l~~~~~~~d~~~f~~~~~~~~w~~y~~~~~~G~~~ 734 (782)
++||++++|+|+++|+++|+++|+++||+.|+||+++|||++|+.+|+.|+||
T Consensus 37 ---------------------------~~~F~~~eW~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW~~Y~~~~~~G~rk 89 (94)
T PF03015_consen 37 ---------------------------LEYFTTNEWIFDNDNTRRLWERLSPEDREIFNFDIRSIDWEEYFRNYIPGIRK 89 (94)
T ss_pred ---------------------------HHHHHhCceeecchHHHHHHHhCchhcCceecCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999
Q ss_pred HhcCC
Q psy16243 735 YLVKD 739 (782)
Q Consensus 735 y~~ke 739 (782)
|++||
T Consensus 90 yllke 94 (94)
T PF03015_consen 90 YLLKE 94 (94)
T ss_pred HHhCC
Confidence 99998
|
The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=227.44 Aligned_cols=237 Identities=14% Similarity=0.153 Sum_probs=159.0
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc---hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF---DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.+++++.||++++ +.+.++++++|+|||+||.... .....+.+..|+.|+.+++++|++. + ++|||+||
T Consensus 65 ~~~~~~~~Dl~d~------~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS 136 (386)
T PLN02427 65 GRIQFHRINIKHD------SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFST 136 (386)
T ss_pred CCeEEEEcCCCCh------HHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEee
Confidence 4799999999987 7888999999999999997542 2333456678999999999999986 4 89999999
Q ss_pred ceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecC
Q psy16243 334 AYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRP 409 (782)
Q Consensus 334 ~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp 409 (782)
+++||... .++|+. |..+.... ....++ .............+.|+.||.++|+++..+ ..+++++|+||
T Consensus 137 ~~vYg~~~~~~~~e~~---p~~~~~~~---~~~~e~-~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~ 209 (386)
T PLN02427 137 CEVYGKTIGSFLPKDH---PLRQDPAF---YVLKED-ESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRP 209 (386)
T ss_pred eeeeCCCcCCCCCccc---cccccccc---cccccc-ccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecc
Confidence 99998632 333321 11100000 000000 000000001112368999999999999876 35899999999
Q ss_pred CeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhh
Q psy16243 410 SIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAA 489 (782)
Q Consensus 410 ~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~ 489 (782)
++||||.....+| ..+|. .+... ....++..+..|....+.++++..+|||||+|+|++++.++
T Consensus 210 ~~vyGp~~~~~~~----~~~~~----------~~~~~--~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al 273 (386)
T PLN02427 210 FNWIGPRMDFIPG----IDGPS----------EGVPR--VLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMI 273 (386)
T ss_pred cceeCCCCCcccc----ccccc----------cccch--HHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHH
Confidence 9999987543221 00000 00000 01123344556666567778888999999999999999888
Q ss_pred hhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 490 WNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
.... ...+++||++++. +++++.|+++.+.+.++.
T Consensus 274 ~~~~-----------------------~~~g~~yni~~~~-~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 274 ENPA-----------------------RANGHIFNVGNPN-NEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred hCcc-----------------------cccCceEEeCCCC-CCccHHHHHHHHHHHhcc
Confidence 5420 1246799999862 389999999999998774
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.8e-23 Score=225.50 Aligned_cols=274 Identities=22% Similarity=0.266 Sum_probs=188.9
Q ss_pred eeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCccc
Q psy16243 176 MVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHY 255 (782)
Q Consensus 176 ~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~ 255 (782)
+|+|||.+|+.|..+ .+.|... ....+|+|++|........+++.+........ ....
T Consensus 1 ~vlvtGatG~lG~~l----~~~L~~~-------------g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~-----~~~~ 58 (367)
T TIGR01746 1 TVLLTGATGFLGAYL----LEELLRR-------------STQAKVICLVRAASEEHAMERLREALRSYRLW-----QEDL 58 (367)
T ss_pred CEEEeccchHHHHHH----HHHHHhC-------------CCCCEEEEEEccCCHHHHHHHHHHHHHHhCCC-----Cchh
Confidence 479999655555444 2333211 11367999999876555666665543321110 0111
Q ss_pred -ccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecc
Q psy16243 256 -LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTA 334 (782)
Q Consensus 256 -~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~ 334 (782)
..+++++.||++++.+||+.+++..+.+++|+|||+||.+++..++++..++|+.|+.+++++|.+. +.++|||+||.
T Consensus 59 ~~~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~ 137 (367)
T TIGR01746 59 ARERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTI 137 (367)
T ss_pred hhCCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccc
Confidence 1589999999999999999999999999999999999999888888888999999999999999986 67889999999
Q ss_pred eeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-CCCCcEEEecCCe
Q psy16243 335 YSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-GAGMPVAMVRPSI 411 (782)
Q Consensus 335 ~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-~~glp~~IvRp~~ 411 (782)
++++... .+.|+... .+ ......++|+.||+.+|.++..+ ..|++++|+||+.
T Consensus 138 ~v~~~~~~~~~~~~~~~-----------------------~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~ 193 (367)
T TIGR01746 138 SVLAAIDLSTVTEDDAI-----------------------VT-PPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGR 193 (367)
T ss_pred cccCCcCCCCccccccc-----------------------cc-cccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 9987532 11121000 00 00122378999999999999887 4599999999999
Q ss_pred EEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhh-cCceeeeccCCCccccccchhHHHHHHHHhhh
Q psy16243 412 VIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAG-LGLLRSMHADPELVADMVPADNVINCIISAAW 490 (782)
Q Consensus 412 v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 490 (782)
++|+...+ .|... .....++.+.. .|. .+.......+++||||++++++.++.
T Consensus 194 v~G~~~~g----------------------~~~~~-~~~~~~~~~~~~~~~---~p~~~~~~~~~~~vddva~ai~~~~~ 247 (367)
T TIGR01746 194 ILGNSYTG----------------------AINSS-DILWRMVKGCLALGA---YPDSPELTEDLTPVDYVARAIVALSS 247 (367)
T ss_pred eeecCCCC----------------------CCCch-hHHHHHHHHHHHhCC---CCCCCccccCcccHHHHHHHHHHHHh
Confidence 99974332 11111 00112222222 222 22222246789999999999998875
Q ss_pred hccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccc
Q psy16243 491 NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVP 547 (782)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~ 547 (782)
.... ...+++||++++ ++++|.|+++.+.+ .+
T Consensus 248 ~~~~----------------------~~~~~~~~v~~~--~~~s~~e~~~~i~~-~g 279 (367)
T TIGR01746 248 QPAA----------------------SAGGPVFHVVNP--EPVSLDEFLEWLER-AG 279 (367)
T ss_pred CCCc----------------------ccCCceEEecCC--CCCCHHHHHHHHHH-cC
Confidence 4310 012689999998 89999999999988 44
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-22 Score=240.56 Aligned_cols=265 Identities=22% Similarity=0.294 Sum_probs=184.9
Q ss_pred eeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCccc
Q psy16243 176 MVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHY 255 (782)
Q Consensus 176 ~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~ 255 (782)
.|+|||.+|+.|..+ .+.|+ +...+.+|+++.|.... .++...... + .
T Consensus 2 ~ILVTGatGfIG~~l----v~~Ll-------------~~~~g~~V~~l~R~~~~----~~~~~~~~~--~---------~ 49 (657)
T PRK07201 2 RYFVTGGTGFIGRRL----VSRLL-------------DRRREATVHVLVRRQSL----SRLEALAAY--W---------G 49 (657)
T ss_pred eEEEeCCccHHHHHH----HHHHH-------------hcCCCCEEEEEECcchH----HHHHHHHHh--c---------C
Confidence 589999444444333 12222 11236789999995432 222221110 0 0
Q ss_pred ccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecce
Q psy16243 256 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAY 335 (782)
Q Consensus 256 ~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~ 335 (782)
..+++++.||++++.+|++.+.++.+ +++|+||||||.+++..+.....++|+.||.+++++|++. ++++|||+||.+
T Consensus 50 ~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~ 127 (657)
T PRK07201 50 ADRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIA 127 (657)
T ss_pred CCcEEEEecccCCccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccc
Confidence 14789999999999999999988888 8999999999998877777788899999999999999987 689999999999
Q ss_pred eccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEe
Q psy16243 336 SNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIA 414 (782)
Q Consensus 336 v~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G 414 (782)
++|... ...|+..+. .....+.|+.||+.+|+++.+. .+++++|+||+.|||
T Consensus 128 v~g~~~~~~~e~~~~~--------------------------~~~~~~~Y~~sK~~~E~~~~~~-~g~~~~ilRp~~v~G 180 (657)
T PRK07201 128 VAGDYEGVFREDDFDE--------------------------GQGLPTPYHRTKFEAEKLVREE-CGLPWRVYRPAVVVG 180 (657)
T ss_pred cccCccCccccccchh--------------------------hcCCCCchHHHHHHHHHHHHHc-CCCcEEEEcCCeeee
Confidence 997542 223321110 0122378999999999999864 589999999999999
Q ss_pred ccCCCCcccccccCCcccccccCCCcccccccccchh---hHHHHhhc-CceeeeccCCCccccccchhHHHHHHHHhhh
Q psy16243 415 TNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPT---GIVAGAGL-GLLRSMHADPELVADMVPADNVINCIISAAW 490 (782)
Q Consensus 415 ~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~---~~~~~~~~-g~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 490 (782)
+...+ ..++..++. .++..+.. .......+.+....+++||||+++++..++.
T Consensus 181 ~~~~g-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~ 237 (657)
T PRK07201 181 DSRTG-----------------------EMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMH 237 (657)
T ss_pred cCCCC-----------------------ccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhc
Confidence 86432 111111111 12222211 1111233455667899999999999988875
Q ss_pred hccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 491 NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
.. ...+++||++++ +++++.|+++.+.+.++..+
T Consensus 238 ~~------------------------~~~g~~~ni~~~--~~~s~~el~~~i~~~~g~~~ 271 (657)
T PRK07201 238 KD------------------------GRDGQTFHLTDP--KPQRVGDIYNAFARAAGAPP 271 (657)
T ss_pred Cc------------------------CCCCCEEEeCCC--CCCcHHHHHHHHHHHhCCCc
Confidence 32 235689999998 89999999999999887644
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=6e-23 Score=243.91 Aligned_cols=273 Identities=13% Similarity=0.063 Sum_probs=185.7
Q ss_pred CcccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccc
Q psy16243 169 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPM 248 (782)
Q Consensus 169 ~p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l 248 (782)
|..|.++.|+|||.+|+.|..+ .+.|.. ..+.+|.++.|..... ....
T Consensus 310 ~~~~~~~~VLVTGatGFIGs~L----v~~Ll~--------------~~g~~V~~l~r~~~~~------~~~~-------- 357 (660)
T PRK08125 310 CSAKRRTRVLILGVNGFIGNHL----TERLLR--------------DDNYEVYGLDIGSDAI------SRFL-------- 357 (660)
T ss_pred hhhhcCCEEEEECCCchHHHHH----HHHHHh--------------CCCcEEEEEeCCchhh------hhhc--------
Confidence 4568899999999544444433 123321 1146888888864211 0000
Q ss_pred cccCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc---hhhHHHHHHhhHHHHHHHHHHHHHccCC
Q psy16243 249 RKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF---DAHLKVAVSINLRATKALLEMAKEMKQL 325 (782)
Q Consensus 249 ~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~Lle~a~~~~~~ 325 (782)
...+++++.||++++. ..++++++++|+|||+||.... .....+.+++|+.||.+++++|++. +
T Consensus 358 ------~~~~~~~~~gDl~d~~-----~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~- 424 (660)
T PRK08125 358 ------GHPRFHFVEGDISIHS-----EWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N- 424 (660)
T ss_pred ------CCCceEEEeccccCcH-----HHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-
Confidence 0136889999999861 2356677899999999997542 3344567899999999999999997 4
Q ss_pred ceEEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCC
Q psy16243 326 KSFVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAG 401 (782)
Q Consensus 326 ~~fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~g 401 (782)
++|||+||.++||... +++|+....+. .|. ....+.|+.||.++|+++..+ ..+
T Consensus 425 ~~~V~~SS~~vyg~~~~~~~~E~~~~~~~--------------------~p~--~~p~s~Yg~sK~~~E~~~~~~~~~~g 482 (660)
T PRK08125 425 KRIIFPSTSEVYGMCTDKYFDEDTSNLIV--------------------GPI--NKQRWIYSVSKQLLDRVIWAYGEKEG 482 (660)
T ss_pred CeEEEEcchhhcCCCCCCCcCcccccccc--------------------CCC--CCCccchHHHHHHHHHHHHHHHHhcC
Confidence 8999999999998632 34454211000 000 011267999999999999887 348
Q ss_pred CcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHH
Q psy16243 402 MPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNV 481 (782)
Q Consensus 402 lp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdv 481 (782)
++++++||+++|||.+...... .+.. ......++..+..|....+.+++++.+|||||+|+
T Consensus 483 ~~~~ilR~~~vyGp~~~~~~~~------------------~~~~-~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dv 543 (660)
T PRK08125 483 LRFTLFRPFNWMGPRLDNLNAA------------------RIGS-SRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDG 543 (660)
T ss_pred CceEEEEEceeeCCCccccccc------------------cccc-cchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHH
Confidence 9999999999999865321100 0000 00112345555666666677889999999999999
Q ss_pred HHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 482 INCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 482 a~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
+++++.++.... ....+++||++++. ++++++|+++.+.+..+..+
T Consensus 544 a~a~~~~l~~~~----------------------~~~~g~iyni~~~~-~~~s~~el~~~i~~~~g~~~ 589 (660)
T PRK08125 544 IEALFRIIENKD----------------------NRCDGQIINIGNPD-NEASIRELAEMLLASFEKHP 589 (660)
T ss_pred HHHHHHHHhccc----------------------cccCCeEEEcCCCC-CceeHHHHHHHHHHHhccCc
Confidence 999998886421 01246899999872 27999999999999887543
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=211.74 Aligned_cols=261 Identities=20% Similarity=0.217 Sum_probs=192.5
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.++.|+|||..|++|+.+ .+.|+.. ++.|...+|....+...+.+.++.
T Consensus 5 ~~~~VcVTGAsGfIgswi----vk~LL~r---------------GY~V~gtVR~~~~~k~~~~L~~l~------------ 53 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWI----VKLLLSR---------------GYTVRGTVRDPEDEKKTEHLRKLE------------ 53 (327)
T ss_pred CCcEEEEeCCchHHHHHH----HHHHHhC---------------CCEEEEEEcCcchhhhHHHHHhcc------------
Confidence 467999999666665555 3444433 789999999876544434444432
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhh--HHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAH--LKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~--~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
...+++..+.+||.++ +.++..+++||.|||+|..+.|+.. ..+.+++.|.||.+++++|++.+.++|+||
T Consensus 54 -~a~~~l~l~~aDL~d~------~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~ 126 (327)
T KOG1502|consen 54 -GAKERLKLFKADLLDE------GSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVY 126 (327)
T ss_pred -cCcccceEEecccccc------chHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEE
Confidence 2235799999999999 8999999999999999999988644 457999999999999999999977999999
Q ss_pred EecceeccCC-------CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCC
Q psy16243 331 VSTAYSNCRQ-------PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAG 401 (782)
Q Consensus 331 vST~~v~~~~-------~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~g 401 (782)
+||+++...+ ..++|+...+ ++..... .+-|..||.+||+...++ ..+
T Consensus 127 TSS~aAv~~~~~~~~~~~vvdE~~wsd---------------~~~~~~~--------~~~Y~~sK~lAEkaAw~fa~e~~ 183 (327)
T KOG1502|consen 127 TSSTAAVRYNGPNIGENSVVDEESWSD---------------LDFCRCK--------KLWYALSKTLAEKAAWEFAKENG 183 (327)
T ss_pred eccHHHhccCCcCCCCCcccccccCCc---------------HHHHHhh--------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999665432 1445543221 1111110 167999999999999998 458
Q ss_pred CcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHH
Q psy16243 402 MPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNV 481 (782)
Q Consensus 402 lp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdv 481 (782)
++.+.+-|+.|+||.-.|.+ +....++...+.|...... .....+|+|+||
T Consensus 184 ~~lv~inP~lV~GP~l~~~l--------------------------~~s~~~~l~~i~G~~~~~~---n~~~~~VdVrDV 234 (327)
T KOG1502|consen 184 LDLVTINPGLVFGPGLQPSL--------------------------NSSLNALLKLIKGLAETYP---NFWLAFVDVRDV 234 (327)
T ss_pred ccEEEecCCceECCCccccc--------------------------chhHHHHHHHHhcccccCC---CCceeeEeHHHH
Confidence 99999999999998655422 2223455666677544333 233449999999
Q ss_pred HHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCC
Q psy16243 482 INCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPS 551 (782)
Q Consensus 482 a~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~ 551 (782)
|+|++.+.+++ ...+.|.|.+. ..++.|+++.+.+.+...++
T Consensus 235 A~AHv~a~E~~-------------------------~a~GRyic~~~---~~~~~ei~~~l~~~~P~~~i 276 (327)
T KOG1502|consen 235 ALAHVLALEKP-------------------------SAKGRYICVGE---VVSIKEIADILRELFPDYPI 276 (327)
T ss_pred HHHHHHHHcCc-------------------------ccCceEEEecC---cccHHHHHHHHHHhCCCCCC
Confidence 99999999875 34588988885 44599999999998877663
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=227.99 Aligned_cols=245 Identities=13% Similarity=0.130 Sum_probs=172.5
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc---hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecc
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF---DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTA 334 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~ 334 (782)
+++++.+|+.++. +.++|+|||+||.... ..+..+.+++|+.||.+++++|++. + .+|||+||.
T Consensus 169 ~~~~~~~Di~~~~-----------~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g-~r~V~~SS~ 235 (436)
T PLN02166 169 RFELIRHDVVEPI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-G-ARFLLTSTS 235 (436)
T ss_pred ceEEEECcccccc-----------ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-C-CEEEEECcH
Confidence 6788999987752 3469999999996532 2345678899999999999999987 4 489999999
Q ss_pred eeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecCC
Q psy16243 335 YSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPS 410 (782)
Q Consensus 335 ~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp~ 410 (782)
+|||... ++.|+.+.. ..|. ...+.|+.||..+|+++..+ ..+++++++||+
T Consensus 236 ~VYg~~~~~p~~E~~~~~---------------------~~p~---~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~ 291 (436)
T PLN02166 236 EVYGDPLEHPQKETYWGN---------------------VNPI---GERSCYDEGKRTAETLAMDYHRGAGVEVRIARIF 291 (436)
T ss_pred HHhCCCCCCCCCcccccc---------------------CCCC---CCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 9998643 344442110 0011 11278999999999999887 348999999999
Q ss_pred eEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhh
Q psy16243 411 IVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAW 490 (782)
Q Consensus 411 ~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 490 (782)
++|||...+..+ + ....++..+..|....+.+++++.+|||||+|++++++.++.
T Consensus 292 ~vYGp~~~~~~~-------------------~------~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~ 346 (436)
T PLN02166 292 NTYGPRMCLDDG-------------------R------VVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALME 346 (436)
T ss_pred cccCCCCCCCcc-------------------c------hHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence 999986432110 0 111455666677766778899999999999999999998875
Q ss_pred hccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCcceeceeeEeccchHHHH
Q psy16243 491 NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHK 570 (782)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 570 (782)
.. ..++||++++ +++|+.|+++.+.+..+.... ..+.+.- .....+
T Consensus 347 ~~--------------------------~~giyNIgs~--~~~Si~ela~~I~~~~g~~~~--i~~~p~~---~~~~~~- 392 (436)
T PLN02166 347 GE--------------------------HVGPFNLGNP--GEFTMLELAEVVKETIDSSAT--IEFKPNT---ADDPHK- 392 (436)
T ss_pred cC--------------------------CCceEEeCCC--CcEeHHHHHHHHHHHhCCCCC--eeeCCCC---CCCccc-
Confidence 31 2469999998 889999999999998875321 1222211 010000
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHh
Q psy16243 571 LYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFS 608 (782)
Q Consensus 571 l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~ 608 (782)
......++..++||+|+. .+.+-+..++
T Consensus 393 ---------~~~d~~Ka~~~LGw~P~~-sl~egl~~~i 420 (436)
T PLN02166 393 ---------RKPDISKAKELLNWEPKI-SLREGLPLMV 420 (436)
T ss_pred ---------cccCHHHHHHHcCCCCCC-CHHHHHHHHH
Confidence 122457888899999975 4555555443
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.1e-22 Score=225.30 Aligned_cols=230 Identities=14% Similarity=0.086 Sum_probs=153.6
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCchh------hHHHHHHhhHHHHHHHHHHHHHccCCc-eE
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFDA------HLKVAVSINLRATKALLEMAKEMKQLK-SF 328 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~~------~~~~~~~~Nv~gt~~Lle~a~~~~~~~-~f 328 (782)
++.++.+|++++ +.+..+++ ++|+|||+||...... .....+++|+.||.+++++|++. +++ +|
T Consensus 114 ~v~~v~~Dl~d~------~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-gv~~~~ 186 (442)
T PLN02572 114 EIELYVGDICDF------EFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-APDCHL 186 (442)
T ss_pred cceEEECCCCCH------HHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-CCCccE
Confidence 688999999988 78888887 4899999998743221 12345689999999999999987 564 89
Q ss_pred EEEecceeccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEE
Q psy16243 329 VHVSTAYSNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVA 405 (782)
Q Consensus 329 V~vST~~v~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~ 405 (782)
||+||..+||... +++|...+. +. ...+-++..+....+.||.||.++|.++..+ ..|++++
T Consensus 187 V~~SS~~vYG~~~~~~~E~~i~~--~~-------------~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v 251 (442)
T PLN02572 187 VKLGTMGEYGTPNIDIEEGYITI--TH-------------NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRAT 251 (442)
T ss_pred EEEecceecCCCCCCCccccccc--cc-------------ccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEE
Confidence 9999999998642 344431100 00 0000000011122378999999999999887 3499999
Q ss_pred EecCCeEEeccCCCCcccccccCCcccccccCCCcccccccc-cchhhHHHHhhcCceeeeccCCCccccccchhHHHHH
Q psy16243 406 MVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNH-YGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINC 484 (782)
Q Consensus 406 IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~a 484 (782)
++||++||||++.+.. ..|. .++.. ...... .....++..+..|....+.|++++.+||+||+|+|++
T Consensus 252 ~lR~~~vyGp~~~~~~------~~~~--li~~~---~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a 320 (442)
T PLN02572 252 DLNQGVVYGVRTDETM------MDEE--LINRL---DYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRC 320 (442)
T ss_pred EEecccccCCCCcccc------cccc--ccccc---CcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHH
Confidence 9999999998754310 0000 00000 000000 1122344555667666678899999999999999999
Q ss_pred HHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhc
Q psy16243 485 IISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKA 545 (782)
Q Consensus 485 ii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~ 545 (782)
++.++..... .....+||+++ .++++.|+++.+.+.
T Consensus 321 ~~~al~~~~~----------------------~g~~~i~Nigs---~~~si~el~~~i~~~ 356 (442)
T PLN02572 321 IEIAIANPAK----------------------PGEFRVFNQFT---EQFSVNELAKLVTKA 356 (442)
T ss_pred HHHHHhChhh----------------------cCceeEEEeCC---CceeHHHHHHHHHHH
Confidence 9998864210 01236899975 469999999999998
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.5e-22 Score=219.74 Aligned_cols=202 Identities=18% Similarity=0.129 Sum_probs=157.1
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHc--------cC
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEM--------KQ 324 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~--------~~ 324 (782)
++.++.+|++++ +++++++++ +|+|||+||..... +...+.+++|+.||.+++++|.+. ++
T Consensus 52 ~~~~~~~Dl~d~------~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~ 125 (355)
T PRK10217 52 RFAFEKVDICDR------AELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS 125 (355)
T ss_pred ceEEEECCCcCh------HHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC
Confidence 678899999988 788888874 89999999986543 245678899999999999999863 35
Q ss_pred CceEEEEecceeccCCC----cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 325 LKSFVHVSTAYSNCRQP----IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 325 ~~~fV~vST~~v~~~~~----~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
+++|||+||.++|+... ++.|+. +. ...+.|+.||.++|.++..+
T Consensus 126 ~~~~i~~SS~~vyg~~~~~~~~~~E~~--------------------------~~---~p~s~Y~~sK~~~e~~~~~~~~ 176 (355)
T PRK10217 126 AFRFHHISTDEVYGDLHSTDDFFTETT--------------------------PY---APSSPYSASKASSDHLVRAWLR 176 (355)
T ss_pred ceEEEEecchhhcCCCCCCCCCcCCCC--------------------------CC---CCCChhHHHHHHHHHHHHHHHH
Confidence 78999999999998532 344431 11 11278999999999999887
Q ss_pred CCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccch
Q psy16243 399 GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPA 478 (782)
Q Consensus 399 ~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpV 478 (782)
..+++++++||+++|||...+.. . ...++..+..|....+.+++++.+||+||
T Consensus 177 ~~~~~~~i~r~~~v~Gp~~~~~~---------------------~------~~~~~~~~~~~~~~~~~g~g~~~~~~i~v 229 (355)
T PRK10217 177 TYGLPTLITNCSNNYGPYHFPEK---------------------L------IPLMILNALAGKPLPVYGNGQQIRDWLYV 229 (355)
T ss_pred HhCCCeEEEeeeeeeCCCCCccc---------------------H------HHHHHHHHhcCCCceEeCCCCeeeCcCcH
Confidence 35899999999999998653211 0 11344455566555567899999999999
Q ss_pred hHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 479 DNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 479 Ddva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
+|++.+++.++... ..+++||++++ +++++.|+++.+.+.++.
T Consensus 230 ~D~a~a~~~~~~~~-------------------------~~~~~yni~~~--~~~s~~~~~~~i~~~~~~ 272 (355)
T PRK10217 230 EDHARALYCVATTG-------------------------KVGETYNIGGH--NERKNLDVVETICELLEE 272 (355)
T ss_pred HHHHHHHHHHHhcC-------------------------CCCCeEEeCCC--CcccHHHHHHHHHHHhcc
Confidence 99999999887542 24689999999 899999999999998764
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.5e-22 Score=217.51 Aligned_cols=307 Identities=15% Similarity=0.076 Sum_probs=196.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
|.+|.++|||.+|++|..+ .+.|.. .+.+|+++.|...... .....+ .
T Consensus 2 ~~~k~ilItGatG~IG~~l----~~~L~~---------------~G~~V~~~~r~~~~~~--~~~~~~-~---------- 49 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWL----SLWLLE---------------LGAEVYGYSLDPPTSP--NLFELL-N---------- 49 (349)
T ss_pred cCCCEEEEECCCChhHHHH----HHHHHH---------------CCCEEEEEeCCCccch--hHHHHH-h----------
Confidence 5578999999555555444 233322 1567888877643211 111111 0
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCc
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLK 326 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~ 326 (782)
...++.++.+|++++ +++..++++ +|+|||+||..... ......+++|+.|+.+++++|+..+..+
T Consensus 50 ---~~~~~~~~~~Dl~~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~ 120 (349)
T TIGR02622 50 ---LAKKIEDHFGDIRDA------AKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVK 120 (349)
T ss_pred ---hcCCceEEEccCCCH------HHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCC
Confidence 012577899999987 788888875 59999999964332 2345678999999999999998864478
Q ss_pred eEEEEecceeccCCC---cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC----
Q psy16243 327 SFVHVSTAYSNCRQP---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG---- 399 (782)
Q Consensus 327 ~fV~vST~~v~~~~~---~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~---- 399 (782)
+|||+||..+|+... ++.|+... ...+.|+.||.++|.++..+.
T Consensus 121 ~iv~~SS~~vyg~~~~~~~~~e~~~~-----------------------------~p~~~Y~~sK~~~e~~~~~~~~~~~ 171 (349)
T TIGR02622 121 AVVNVTSDKCYRNDEWVWGYRETDPL-----------------------------GGHDPYSSSKACAELVIASYRSSFF 171 (349)
T ss_pred EEEEEechhhhCCCCCCCCCccCCCC-----------------------------CCCCcchhHHHHHHHHHHHHHHHhh
Confidence 999999999998632 23332110 112789999999999997752
Q ss_pred -----CCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCcccc
Q psy16243 400 -----AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVAD 474 (782)
Q Consensus 400 -----~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 474 (782)
.+++++++||+++|||...... .....++..+..|.... .+++++.+|
T Consensus 172 ~~~~~~~i~~~~lR~~~vyGp~~~~~~--------------------------~~~~~~~~~~~~g~~~~-~~~g~~~rd 224 (349)
T TIGR02622 172 GVANFHGIKIASARAGNVIGGGDWAED--------------------------RLIPDVIRAFSSNKIVI-IRNPDATRP 224 (349)
T ss_pred cccccCCCcEEEEccCcccCCCcchhh--------------------------hhhHHHHHHHhcCCCeE-ECCCCcccc
Confidence 2899999999999997531100 00114555555665443 457899999
Q ss_pred ccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCcc
Q psy16243 475 MVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFA 554 (782)
Q Consensus 475 ~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~~ 554 (782)
|+||||+|++++.++...... ....+++||++++...+++..++++.+.+..+..+....
T Consensus 225 ~i~v~D~a~a~~~~~~~~~~~--------------------~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~ 284 (349)
T TIGR02622 225 WQHVLEPLSGYLLLAEKLFTG--------------------QAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWE 284 (349)
T ss_pred eeeHHHHHHHHHHHHHHHhhc--------------------CccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCcee
Confidence 999999999999887542100 012257999998643789999999998887654332111
Q ss_pred eeceeeEeccchHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHh
Q psy16243 555 IWAYCFTLNKYKSIHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFS 608 (782)
Q Consensus 555 ~~~~~~~~~~~~~~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~ 608 (782)
.. +.. ... .... .......++..++||+|+. .+-+-+...+
T Consensus 285 ~~-~~~-~~~----~~~~------~~~~d~~k~~~~lgw~p~~-~l~~gi~~~i 325 (349)
T TIGR02622 285 DD-SDL-NHP----HEAR------LLKLDSSKARTLLGWHPRW-GLEEAVSRTV 325 (349)
T ss_pred ec-cCC-CCC----cccc------eeecCHHHHHHHhCCCCCC-CHHHHHHHHH
Confidence 10 000 000 0000 1123457788889999986 5555554443
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.4e-22 Score=216.60 Aligned_cols=263 Identities=13% Similarity=0.123 Sum_probs=169.8
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+++|+|||.+|+.|..+ .+.|+. .+.+|.++.|..........+..+
T Consensus 8 ~~~~vlItG~~GfIG~~l----~~~L~~---------------~g~~V~~~~r~~~~~~~~~~~~~~------------- 55 (338)
T PLN00198 8 GKKTACVIGGTGFLASLL----IKLLLQ---------------KGYAVNTTVRDPENQKKIAHLRAL------------- 55 (338)
T ss_pred CCCeEEEECCchHHHHHH----HHHHHH---------------CCCEEEEEECCCCCHHHHHHHHhc-------------
Confidence 367899999555555444 233322 146788788764321111111111
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch--hhHHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD--AHLKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
+ ...+++++.+|++++ +++.++++++|+|||+||...+. .+....+++|+.|+.+++++|.+.+++++|||
T Consensus 56 ~-~~~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~ 128 (338)
T PLN00198 56 Q-ELGDLKIFGADLTDE------ESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVIL 128 (338)
T ss_pred C-CCCceEEEEcCCCCh------HHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEE
Confidence 0 013688999999998 77888889999999999976543 23345679999999999999988656899999
Q ss_pred EecceeccCC------CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCC
Q psy16243 331 VSTAYSNCRQ------PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGM 402 (782)
Q Consensus 331 vST~~v~~~~------~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~gl 402 (782)
+||+.+|+.. .+++|+...+ . ..++... .+.+.|+.||.++|.++..+ ..++
T Consensus 129 ~SS~~~~g~~~~~~~~~~~~E~~~~~----~-----------~~~~~~~-----~p~~~Y~~sK~~~E~~~~~~~~~~~~ 188 (338)
T PLN00198 129 TSSAAAVSINKLSGTGLVMNEKNWTD----V-----------EFLTSEK-----PPTWGYPASKTLAEKAAWKFAEENNI 188 (338)
T ss_pred eecceeeeccCCCCCCceeccccCCc----h-----------hhhhhcC-----CccchhHHHHHHHHHHHHHHHHhcCc
Confidence 9999998742 1334432110 0 0000000 12267999999999999887 3489
Q ss_pred cEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeecc-CC----Cccccccc
Q psy16243 403 PVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHA-DP----ELVADMVP 477 (782)
Q Consensus 403 p~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~-~~----~~~~d~Vp 477 (782)
+++++||++||||...+.. | .+. .++..+..|......+ .+ +..+||+|
T Consensus 189 ~~~~~R~~~vyGp~~~~~~--------~-----------~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 242 (338)
T PLN00198 189 DLITVIPTLMAGPSLTSDI--------P-----------SSL-------SLAMSLITGNEFLINGLKGMQMLSGSISITH 242 (338)
T ss_pred eEEEEeCCceECCCccCCC--------C-----------CcH-------HHHHHHHcCCccccccccccccccCCcceeE
Confidence 9999999999998653211 0 110 1222333443222222 11 22479999
Q ss_pred hhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 478 ADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 478 VDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
|+|+|++++.++... ...+.|+ +++ .++++.|+++.+.+..+.
T Consensus 243 V~D~a~a~~~~~~~~-------------------------~~~~~~~-~~~--~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 243 VEDVCRAHIFLAEKE-------------------------SASGRYI-CCA--ANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred HHHHHHHHHHHhhCc-------------------------CcCCcEE-Eec--CCCCHHHHHHHHHHHCCC
Confidence 999999999887542 1234574 555 678999999999987654
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.3e-22 Score=213.42 Aligned_cols=257 Identities=18% Similarity=0.124 Sum_probs=180.5
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
++.++.+|++++ +++.+++++ +|+|||+||....+ +..+.++++|+.|+.+++++|++...-.++||+|
T Consensus 51 ~~~~~~~Dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 124 (317)
T TIGR01181 51 RYRFVKGDIGDR------ELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHIS 124 (317)
T ss_pred CcEEEEcCCcCH------HHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEee
Confidence 678899999998 888888887 89999999976543 3455678999999999999998863233899999
Q ss_pred cceeccCCC---cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEe
Q psy16243 333 TAYSNCRQP---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMV 407 (782)
Q Consensus 333 T~~v~~~~~---~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~Iv 407 (782)
|.++|+... .+.|.. +. ...+.|+.+|..+|.++..+ ..+++++++
T Consensus 125 s~~v~g~~~~~~~~~e~~--------------------------~~---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~ 175 (317)
T TIGR01181 125 TDEVYGDLEKGDAFTETT--------------------------PL---APSSPYSASKAASDHLVRAYHRTYGLPALIT 175 (317)
T ss_pred ccceeCCCCCCCCcCCCC--------------------------CC---CCCCchHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 999998643 233331 11 11278999999999999876 458999999
Q ss_pred cCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHH
Q psy16243 408 RPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIIS 487 (782)
Q Consensus 408 Rp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~ 487 (782)
||+.+|||...+. ++ ...++..+..|....+.++++..++++|++|+++++..
T Consensus 176 R~~~i~G~~~~~~---------------------~~------~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~ 228 (317)
T TIGR01181 176 RCSNNYGPYQFPE---------------------KL------IPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYL 228 (317)
T ss_pred EeccccCCCCCcc---------------------cH------HHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHH
Confidence 9999999754321 11 11344555566555566788899999999999999988
Q ss_pred hhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCcceeceeeEeccchH
Q psy16243 488 AAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKS 567 (782)
Q Consensus 488 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~~~~~~~~~~~~~~~ 567 (782)
++.+. ..+++||++++ .++++.|+++.+.+.++..+.. ..+.+. ..
T Consensus 229 ~~~~~-------------------------~~~~~~~~~~~--~~~s~~~~~~~i~~~~~~~~~~-~~~~~~------~~ 274 (317)
T TIGR01181 229 VLEKG-------------------------RVGETYNIGGG--NERTNLEVVETILELLGKDEDL-ITHVED------RP 274 (317)
T ss_pred HHcCC-------------------------CCCceEEeCCC--CceeHHHHHHHHHHHhCCCccc-ccccCC------Cc
Confidence 87532 34589999998 8899999999999998753321 011110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhccccccccc
Q psy16243 568 IHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTF 621 (782)
Q Consensus 568 ~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~~~~~f~~~~w~f 621 (782)
.+... .....+++.+.+|++|+.. +-+-+. ..++||..+.|.|
T Consensus 275 ~~~~~-------~~~~~~k~~~~lG~~p~~~-~~~~i~---~~~~~~~~~~~~~ 317 (317)
T TIGR01181 275 GHDRR-------YAIDASKIKRELGWAPKYT-FEEGLR---KTVQWYLDNEWWW 317 (317)
T ss_pred cchhh-------hcCCHHHHHHHhCCCCCCc-HHHHHH---HHHHHHHhccCCC
Confidence 00000 0123577788899999642 333343 3346677777654
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.4e-22 Score=217.06 Aligned_cols=258 Identities=15% Similarity=0.104 Sum_probs=175.2
Q ss_pred CeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCcc
Q psy16243 175 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPH 254 (782)
Q Consensus 175 k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~ 254 (782)
|+++|||.+|++|..+ .+.|.. .+.+|.++.|...... .+++...... .. ..
T Consensus 1 ~~vlVTGatGfIG~~l----~~~L~~---------------~G~~V~~~~r~~~~~~-~~~~~~~~~~-----~~---~~ 52 (343)
T TIGR01472 1 KIALITGITGQDGSYL----AEFLLE---------------KGYEVHGLIRRSSSFN-TQRIEHIYED-----PH---NV 52 (343)
T ss_pred CeEEEEcCCCcHHHHH----HHHHHH---------------CCCEEEEEecCCcccc-hhhhhhhhhc-----cc---cc
Confidence 5799999555544444 223322 1567888888643211 1222221100 00 01
Q ss_pred cccceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCC---c
Q psy16243 255 YLSKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQL---K 326 (782)
Q Consensus 255 ~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~---~ 326 (782)
...+++++.+|+++. +.+.+++++ +|+|||+||..... .......++|+.||.+++++|++. ++ +
T Consensus 53 ~~~~~~~~~~Dl~d~------~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~ 125 (343)
T TIGR01472 53 NKARMKLHYGDLTDS------SNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSV 125 (343)
T ss_pred cccceeEEEeccCCH------HHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCe
Confidence 123688999999987 788888885 59999999975432 223456788999999999999986 44 4
Q ss_pred eEEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCC
Q psy16243 327 SFVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGM 402 (782)
Q Consensus 327 ~fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~gl 402 (782)
+|||+||.++||... ++.|+. |. ...+.|+.||..+|.++..+. .++
T Consensus 126 ~~v~~SS~~vyg~~~~~~~~E~~--------------------------~~---~p~~~Y~~sK~~~e~~~~~~~~~~~~ 176 (343)
T TIGR01472 126 KFYQASTSELYGKVQEIPQNETT--------------------------PF---YPRSPYAAAKLYAHWITVNYREAYGL 176 (343)
T ss_pred eEEEeccHHhhCCCCCCCCCCCC--------------------------CC---CCCChhHHHHHHHHHHHHHHHHHhCC
Confidence 899999999998643 333431 11 112789999999999998873 488
Q ss_pred cEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCc-eeeeccCCCccccccchhHH
Q psy16243 403 PVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGL-LRSMHADPELVADMVPADNV 481 (782)
Q Consensus 403 p~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~d~VpVDdv 481 (782)
++++.|+.+++||.... .... .....++..+..|. .....|++++.+||+||+|+
T Consensus 177 ~~~~~~~~~~~gp~~~~----------------------~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~ 232 (343)
T TIGR01472 177 FAVNGILFNHESPRRGE----------------------NFVT--RKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDY 232 (343)
T ss_pred ceEEEeecccCCCCCCc----------------------cccc--hHHHHHHHHHHcCCCCceeeCCCccccCceeHHHH
Confidence 98999999999874211 0000 00112333444554 33456889999999999999
Q ss_pred HHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 482 INCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 482 a~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
|++++.++... ..++||++++ .++|+.|+++.+.+..+.
T Consensus 233 a~a~~~~~~~~--------------------------~~~~yni~~g--~~~s~~e~~~~i~~~~g~ 271 (343)
T TIGR01472 233 VEAMWLMLQQD--------------------------KPDDYVIATG--ETHSVREFVEVSFEYIGK 271 (343)
T ss_pred HHHHHHHHhcC--------------------------CCccEEecCC--CceeHHHHHHHHHHHcCC
Confidence 99999887542 1358999999 899999999999998874
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.88 E-value=6e-22 Score=223.47 Aligned_cols=247 Identities=15% Similarity=0.145 Sum_probs=169.9
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccC---chhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVR---FDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~---f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.+++++.+|+.++ ++.++|+|||+||... ...+..+.+++|+.||.+|+++|++. +. +|||+||
T Consensus 167 ~~~~~i~~D~~~~-----------~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS 233 (442)
T PLN02206 167 PNFELIRHDVVEP-----------ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTST 233 (442)
T ss_pred CceEEEECCccCh-----------hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECC
Confidence 3678899998775 2346999999999653 22345678899999999999999987 44 8999999
Q ss_pred ceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecC
Q psy16243 334 AYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRP 409 (782)
Q Consensus 334 ~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp 409 (782)
..+|+... +..|+.+.. ..|. ...+.|+.||.++|.++..+ ..+++++++||
T Consensus 234 ~~VYg~~~~~p~~E~~~~~---------------------~~P~---~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~ 289 (442)
T PLN02206 234 SEVYGDPLQHPQVETYWGN---------------------VNPI---GVRSCYDEGKRTAETLTMDYHRGANVEVRIARI 289 (442)
T ss_pred hHHhCCCCCCCCCcccccc---------------------CCCC---CccchHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 99998642 333432110 0010 11278999999999999887 35899999999
Q ss_pred CeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhh
Q psy16243 410 SIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAA 489 (782)
Q Consensus 410 ~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~ 489 (782)
+++|||...... + .....++..+..+....+++++++.+|++||+|+|++++.++
T Consensus 290 ~~vyGp~~~~~~--------------------~-----~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~ 344 (442)
T PLN02206 290 FNTYGPRMCIDD--------------------G-----RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 344 (442)
T ss_pred ccccCCCCCccc--------------------c-----chHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHH
Confidence 999998543211 0 001135555666666667888999999999999999999887
Q ss_pred hhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCcceeceeeEeccchHHH
Q psy16243 490 WNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIH 569 (782)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~ 569 (782)
... ..++||++++ +++++.|+++.+.+..+.... ..+.+.. .... .
T Consensus 345 e~~--------------------------~~g~yNIgs~--~~~sl~Elae~i~~~~g~~~~--i~~~p~~---~~~~-~ 390 (442)
T PLN02206 345 EGE--------------------------HVGPFNLGNP--GEFTMLELAKVVQETIDPNAK--IEFRPNT---EDDP-H 390 (442)
T ss_pred hcC--------------------------CCceEEEcCC--CceeHHHHHHHHHHHhCCCCc--eeeCCCC---CCCc-c
Confidence 531 2458999999 899999999999998764211 1111110 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhh
Q psy16243 570 KLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSE 609 (782)
Q Consensus 570 ~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~ 609 (782)
......+++...+||+|+. .+.+-+...++
T Consensus 391 ---------~~~~d~sKa~~~LGw~P~~-~l~egl~~~~~ 420 (442)
T PLN02206 391 ---------KRKPDITKAKELLGWEPKV-SLRQGLPLMVK 420 (442)
T ss_pred ---------ccccCHHHHHHHcCCCCCC-CHHHHHHHHHH
Confidence 0113457888999999974 34444444433
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=215.83 Aligned_cols=222 Identities=17% Similarity=0.113 Sum_probs=157.6
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc---hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecc
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF---DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTA 334 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~ 334 (782)
+++++.+|++++ .+.+.++++++|+|||+||.... ..+....+++|+.||.+++++|++. + ++|||+||+
T Consensus 47 ~~~~~~~Dl~~~-----~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~ 119 (347)
T PRK11908 47 RMHFFEGDITIN-----KEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTS 119 (347)
T ss_pred CeEEEeCCCCCC-----HHHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecc
Confidence 688999999843 15677888899999999996432 2345567899999999999999986 4 799999999
Q ss_pred eeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecCC
Q psy16243 335 YSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPS 410 (782)
Q Consensus 335 ~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp~ 410 (782)
.+||... ++.|+..+... .| .....+.|+.||.++|+++..+ ..+++++++||+
T Consensus 120 ~vyg~~~~~~~~ee~~~~~~--------------------~~--~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~ 177 (347)
T PRK11908 120 EVYGMCPDEEFDPEASPLVY--------------------GP--INKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPF 177 (347)
T ss_pred eeeccCCCcCcCcccccccc--------------------Cc--CCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeee
Confidence 9998642 23332110000 00 0112268999999999999887 368999999999
Q ss_pred eEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhh
Q psy16243 411 IVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAW 490 (782)
Q Consensus 411 ~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 490 (782)
++|||...+.. .|. . ........++..+..|....+.+++++.+|||||+|++++++.++.
T Consensus 178 ~v~Gp~~~~~~-------~~~----------~--~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~ 238 (347)
T PRK11908 178 NWIGPGLDSIY-------TPK----------E--GSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIE 238 (347)
T ss_pred eeeCCCccCCC-------ccc----------c--CCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHh
Confidence 99998754321 000 0 0000112355555666655667788899999999999999998886
Q ss_pred hccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 491 NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
.... ...+++||++++. +.+|++|+++.+.+.++..|
T Consensus 239 ~~~~----------------------~~~g~~yni~~~~-~~~s~~e~~~~i~~~~~~~~ 275 (347)
T PRK11908 239 NKDG----------------------VASGKIYNIGNPK-NNHSVRELANKMLELAAEYP 275 (347)
T ss_pred Cccc----------------------cCCCCeEEeCCCC-CCcCHHHHHHHHHHHhcCcc
Confidence 4210 1346899999861 47999999999998887544
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=233.04 Aligned_cols=205 Identities=23% Similarity=0.172 Sum_probs=157.4
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHh--cCceEEEEcCcccCchh---hHHHHHHhhHHHHHHHHHHHHHccCCceEEEE
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLV--DNIHVVFHCAATVRFDA---HLKVAVSINLRATKALLEMAKEMKQLKSFVHV 331 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~--~~vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~v 331 (782)
.+++++.+|++++ +.+..++ .++|+|||+||....+. ...++.++|+.||.+++++|++.+.+++|||+
T Consensus 57 ~~v~~~~~Dl~d~------~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~ 130 (668)
T PLN02260 57 PNFKFVKGDIASA------DLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHV 130 (668)
T ss_pred CCeEEEECCCCCh------HHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 4788999999987 5565554 57899999999876543 33467899999999999999998558999999
Q ss_pred ecceeccCCCc--c---cccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcE
Q psy16243 332 STAYSNCRQPI--I---EERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPV 404 (782)
Q Consensus 332 ST~~v~~~~~~--i---~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~ 404 (782)
||..+||.... . .|+ .+. .+.+.|+.||..+|+++..+ ..++++
T Consensus 131 SS~~vyg~~~~~~~~~~~E~--------------------------~~~---~p~~~Y~~sK~~aE~~v~~~~~~~~l~~ 181 (668)
T PLN02260 131 STDEVYGETDEDADVGNHEA--------------------------SQL---LPTNPYSATKAGAEMLVMAYGRSYGLPV 181 (668)
T ss_pred cchHHhCCCccccccCcccc--------------------------CCC---CCCCCcHHHHHHHHHHHHHHHHHcCCCE
Confidence 99999986431 0 111 111 12278999999999999887 358999
Q ss_pred EEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHH
Q psy16243 405 AMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINC 484 (782)
Q Consensus 405 ~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~a 484 (782)
+|+||++||||.+.+.. ....++..+..|....+++++++.+++|||+|+|++
T Consensus 182 vilR~~~VyGp~~~~~~---------------------------~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a 234 (668)
T PLN02260 182 ITTRGNNVYGPNQFPEK---------------------------LIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEA 234 (668)
T ss_pred EEECcccccCcCCCccc---------------------------HHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHH
Confidence 99999999998643210 011244455566655677889999999999999999
Q ss_pred HHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 485 IISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 485 ii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
+..++... ..+++||++++ +++++.|+++.+.+.++..+
T Consensus 235 ~~~~l~~~-------------------------~~~~vyni~~~--~~~s~~el~~~i~~~~g~~~ 273 (668)
T PLN02260 235 FEVVLHKG-------------------------EVGHVYNIGTK--KERRVIDVAKDICKLFGLDP 273 (668)
T ss_pred HHHHHhcC-------------------------CCCCEEEECCC--CeeEHHHHHHHHHHHhCCCC
Confidence 98877432 34689999998 88999999999999887543
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-21 Score=215.65 Aligned_cols=210 Identities=15% Similarity=0.073 Sum_probs=151.6
Q ss_pred eeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccC---ch-hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecc
Q psy16243 259 MVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVR---FD-AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTA 334 (782)
Q Consensus 259 v~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~---f~-~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~ 334 (782)
+.++.+|+++. +.+..+++++|+|||+||.+. +. .........|+.|+.+++++|++. ++++|||+||.
T Consensus 66 ~~~~~~Dl~d~------~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~ 138 (370)
T PLN02695 66 HEFHLVDLRVM------ENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSA 138 (370)
T ss_pred ceEEECCCCCH------HHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCch
Confidence 56788999987 677888889999999998753 21 223445678999999999999987 78999999999
Q ss_pred eeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecCCeE
Q psy16243 335 YSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIV 412 (782)
Q Consensus 335 ~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp~~v 412 (782)
.+|+......+.. +.. ++ . .++..+.+.|+.+|..+|+++..+ ..|++++|+||+++
T Consensus 139 ~vYg~~~~~~~~~---~~~------------E~-----~-~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~v 197 (370)
T PLN02695 139 CIYPEFKQLETNV---SLK------------ES-----D-AWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNI 197 (370)
T ss_pred hhcCCccccCcCC---CcC------------cc-----c-CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCc
Confidence 9998643211110 000 00 0 001112278999999999999887 35999999999999
Q ss_pred EeccCCCCcccccccCCcccccccCCCccccccc-ccchhhHHHHhhc-CceeeeccCCCccccccchhHHHHHHHHhhh
Q psy16243 413 IATNKEPIPGWINNHYGPTVIATNKEPIPGWINN-HYGPTGIVAGAGL-GLLRSMHADPELVADMVPADNVINCIISAAW 490 (782)
Q Consensus 413 ~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~-~~~~~~~~~~~~~-g~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 490 (782)
|||.... ... ...+..++..+.. +....+++++++.+++|||+|++++++.++.
T Consensus 198 yGp~~~~------------------------~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~ 253 (370)
T PLN02695 198 YGPFGTW------------------------KGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTK 253 (370)
T ss_pred cCCCCCc------------------------cccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHh
Confidence 9985321 110 0112234444443 3444577889999999999999999988764
Q ss_pred hccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 491 NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
.. ..++||++++ ++++++|+++.+.+..+.
T Consensus 254 ~~--------------------------~~~~~nv~~~--~~~s~~el~~~i~~~~g~ 283 (370)
T PLN02695 254 SD--------------------------FREPVNIGSD--EMVSMNEMAEIALSFENK 283 (370)
T ss_pred cc--------------------------CCCceEecCC--CceeHHHHHHHHHHHhCC
Confidence 31 2468999998 899999999999887765
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.6e-21 Score=210.15 Aligned_cols=271 Identities=19% Similarity=0.126 Sum_probs=177.7
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
++.++.+|++++ +++..+++ ++|+|||+||..... ......+++|+.|+.+++++|++. ++++|||+|
T Consensus 59 ~~~~~~~D~~~~------~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S 131 (352)
T PLN02240 59 NLVFHKVDLRDK------EALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSS 131 (352)
T ss_pred cceEEecCcCCH------HHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEc
Confidence 678899999987 77877776 579999999975432 344568899999999999999886 789999999
Q ss_pred cceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---CCCCcEEEe
Q psy16243 333 TAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG---GAGMPVAMV 407 (782)
Q Consensus 333 T~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~---~~glp~~Iv 407 (782)
|+.+|+... ++.|+... ...+.|+.||..+|+++..+ ..+++++++
T Consensus 132 s~~vyg~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~ 182 (352)
T PLN02240 132 SATVYGQPEEVPCTEEFPL-----------------------------SATNPYGRTKLFIEEICRDIHASDPEWKIILL 182 (352)
T ss_pred cHHHhCCCCCCCCCCCCCC-----------------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 999987532 44444211 11278999999999999875 247899999
Q ss_pred cCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCcee--eec------cCCCccccccchh
Q psy16243 408 RPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLR--SMH------ADPELVADMVPAD 479 (782)
Q Consensus 408 Rp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~--~~~------~~~~~~~d~VpVD 479 (782)
|++++||++....- +|. .. ++. .....++..+..|..+ .+. +++.+.++||||+
T Consensus 183 R~~~v~G~~~~~~~-------g~~-----~~---~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 244 (352)
T PLN02240 183 RYFNPVGAHPSGRI-------GED-----PK---GIP---NNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVM 244 (352)
T ss_pred eecCcCCCCccccc-------cCC-----CC---CCc---chHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHH
Confidence 99999997543211 110 00 000 0111233333333322 233 3678999999999
Q ss_pred HHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCcceecee
Q psy16243 480 NVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYC 559 (782)
Q Consensus 480 dva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~~~~~~~ 559 (782)
|++++++.++...... ....+++||++++ +++|++|+++.+.+.++..... . ..+.
T Consensus 245 D~a~a~~~a~~~~~~~--------------------~~~~~~~yni~~~--~~~s~~el~~~i~~~~g~~~~~-~-~~~~ 300 (352)
T PLN02240 245 DLADGHIAALRKLFTD--------------------PDIGCEAYNLGTG--KGTSVLEMVAAFEKASGKKIPL-K-LAPR 300 (352)
T ss_pred HHHHHHHHHHhhhhhc--------------------cCCCCceEEccCC--CcEeHHHHHHHHHHHhCCCCCc-e-eCCC
Confidence 9999998887542100 0134589999999 8999999999999988743211 0 0110
Q ss_pred eEeccchHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhccccccccccc
Q psy16243 560 FTLNKYKSIHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTN 623 (782)
Q Consensus 560 ~~~~~~~~~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~~~~~f~~~~w~f~~ 623 (782)
. .. ....+ ..-..+++..+||+|+. .+-+-+. ..+++|..+.|.|.+
T Consensus 301 ~---~~----~~~~~------~~d~~k~~~~lg~~p~~-~l~~~l~---~~~~~~~~~~~~~~~ 347 (352)
T PLN02240 301 R---PG----DAEEV------YASTEKAEKELGWKAKY-GIDEMCR---DQWNWASKNPYGYGS 347 (352)
T ss_pred C---CC----Chhhh------hcCHHHHHHHhCCCCCC-CHHHHHH---HHHHHHHhCccccCC
Confidence 0 00 00001 11246788889999974 3333333 334556667776654
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-21 Score=210.09 Aligned_cols=257 Identities=17% Similarity=0.223 Sum_probs=172.3
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+++|+|||.+|+.|..+ .+.|.. .+.+|.+++|..... +.+.+.... .
T Consensus 5 ~~~vlVTGatG~iG~~l----~~~L~~---------------~g~~V~~~~r~~~~~---~~~~~~~~~----------~ 52 (322)
T PLN02986 5 GKLVCVTGASGYIASWI----VKLLLL---------------RGYTVKATVRDLTDR---KKTEHLLAL----------D 52 (322)
T ss_pred CCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEECCCcch---HHHHHHHhc----------c
Confidence 68999999444444333 122321 256788888865422 122221110 0
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch--hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEE
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD--AHLKVAVSINLRATKALLEMAKEMKQLKSFVHV 331 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~v 331 (782)
....+++++.+|++++ +.+..+++++|+|||+|+.+... .+..+.+++|+.||.+++++|++.+++++|||+
T Consensus 53 ~~~~~~~~~~~Dl~~~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~ 126 (322)
T PLN02986 53 GAKERLKLFKADLLEE------SSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILT 126 (322)
T ss_pred CCCCceEEEecCCCCc------chHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEe
Confidence 0124788999999998 78889999999999999976432 333457899999999999999986578999999
Q ss_pred ecceec--cCCC-----cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCC
Q psy16243 332 STAYSN--CRQP-----IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGM 402 (782)
Q Consensus 332 ST~~v~--~~~~-----~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~gl 402 (782)
||.+++ +... .++|+.... |.......+.|+.||.++|.++..+ ..++
T Consensus 127 SS~~~~~~~~~~~~~~~~~~E~~~~~-----------------------p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~ 183 (322)
T PLN02986 127 SSTAAVLFRQPPIEANDVVDETFFSD-----------------------PSLCRETKNWYPLSKILAENAAWEFAKDNGI 183 (322)
T ss_pred cchhheecCCccCCCCCCcCcccCCC-----------------------hHHhhccccchHHHHHHHHHHHHHHHHHhCC
Confidence 998654 3221 133331110 0000112378999999999999887 3589
Q ss_pred cEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHH
Q psy16243 403 PVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVI 482 (782)
Q Consensus 403 p~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva 482 (782)
+++++||+.||||...|.. +. ...++..+..|... . +...+++|+|+|+|
T Consensus 184 ~~~~lrp~~v~Gp~~~~~~--------------------~~------~~~~~~~~~~g~~~--~--~~~~~~~v~v~Dva 233 (322)
T PLN02986 184 DMVVLNPGFICGPLLQPTL--------------------NF------SVELIVDFINGKNL--F--NNRFYRFVDVRDVA 233 (322)
T ss_pred eEEEEcccceeCCCCCCCC--------------------Cc------cHHHHHHHHcCCCC--C--CCcCcceeEHHHHH
Confidence 9999999999998654321 00 01233344444321 2 34568999999999
Q ss_pred HHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 483 NCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 483 ~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
++++.++... ..+++||++ + .++++.|+++.+.+.++..
T Consensus 234 ~a~~~al~~~-------------------------~~~~~yni~-~--~~~s~~e~~~~i~~~~~~~ 272 (322)
T PLN02986 234 LAHIKALETP-------------------------SANGRYIID-G--PIMSVNDIIDILRELFPDL 272 (322)
T ss_pred HHHHHHhcCc-------------------------ccCCcEEEe-c--CCCCHHHHHHHHHHHCCCC
Confidence 9999988653 123589994 5 5799999999999988743
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.3e-21 Score=209.76 Aligned_cols=257 Identities=18% Similarity=0.226 Sum_probs=170.0
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
++.|+|||.+|+.|..+ .+.|.. .+.+|.+++|...... ........ .
T Consensus 4 ~~~ilVtGatGfIG~~l----~~~L~~---------------~g~~V~~~~r~~~~~~---~~~~~~~~----------~ 51 (322)
T PLN02662 4 GKVVCVTGASGYIASWL----VKLLLQ---------------RGYTVKATVRDPNDPK---KTEHLLAL----------D 51 (322)
T ss_pred CCEEEEECChHHHHHHH----HHHHHH---------------CCCEEEEEEcCCCchh---hHHHHHhc----------c
Confidence 57899999544444333 223322 2568888888643211 11111100 0
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch--hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEE
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD--AHLKVAVSINLRATKALLEMAKEMKQLKSFVHV 331 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~v 331 (782)
....+++++.+|++++ +.+..+++++|+|||+||..... .+....+++|+.||.+++++|.+..++++|||+
T Consensus 52 ~~~~~~~~~~~Dl~~~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~ 125 (322)
T PLN02662 52 GAKERLHLFKANLLEE------GSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVT 125 (322)
T ss_pred CCCCceEEEeccccCc------chHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEc
Confidence 1124788999999998 67889999999999999976432 233468899999999999999886578999999
Q ss_pred ecce--eccCCC-----cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCC
Q psy16243 332 STAY--SNCRQP-----IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGM 402 (782)
Q Consensus 332 ST~~--v~~~~~-----~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~gl 402 (782)
||++ +|+... +++|+.... |.......+.|+.||.++|+++..+ ..++
T Consensus 126 SS~~~~~y~~~~~~~~~~~~E~~~~~-----------------------p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 182 (322)
T PLN02662 126 SSMAAVAYNGKPLTPDVVVDETWFSD-----------------------PAFCEESKLWYVLSKTLAEEAAWKFAKENGI 182 (322)
T ss_pred cCHHHhcCCCcCCCCCCcCCcccCCC-----------------------hhHhhcccchHHHHHHHHHHHHHHHHHHcCC
Confidence 9986 354321 233432110 0000112268999999999999876 3589
Q ss_pred cEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHH
Q psy16243 403 PVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVI 482 (782)
Q Consensus 403 p~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva 482 (782)
+++++||+.+|||...+.. + .....+..+..|.. ..++..+|||||+|+|
T Consensus 183 ~~~~lRp~~v~Gp~~~~~~--------------------~------~~~~~~~~~~~~~~----~~~~~~~~~i~v~Dva 232 (322)
T PLN02662 183 DMVTINPAMVIGPLLQPTL--------------------N------TSAEAILNLINGAQ----TFPNASYRWVDVRDVA 232 (322)
T ss_pred cEEEEeCCcccCCCCCCCC--------------------C------chHHHHHHHhcCCc----cCCCCCcCeEEHHHHH
Confidence 9999999999998644311 0 01122333333432 1234678999999999
Q ss_pred HHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 483 NCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 483 ~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
++++.++... ...+.||++ + .+++++|+++.+.+..+..
T Consensus 233 ~a~~~~~~~~-------------------------~~~~~~~~~-g--~~~s~~e~~~~i~~~~~~~ 271 (322)
T PLN02662 233 NAHIQAFEIP-------------------------SASGRYCLV-E--RVVHYSEVVKILHELYPTL 271 (322)
T ss_pred HHHHHHhcCc-------------------------CcCCcEEEe-C--CCCCHHHHHHHHHHHCCCC
Confidence 9999988642 123468886 5 6799999999999987643
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.2e-21 Score=208.13 Aligned_cols=204 Identities=18% Similarity=0.187 Sum_probs=147.6
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecc-e
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTA-Y 335 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~-~ 335 (782)
.+++++.+|++++ +++.++++++|+|||+||... ....+.+++|+.||.+++++|++. ++++|||+||. .
T Consensus 60 ~~~~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~a 130 (342)
T PLN02214 60 ERLILCKADLQDY------EALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGA 130 (342)
T ss_pred CcEEEEecCcCCh------HHHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEecccee
Confidence 3688899999987 788899999999999999753 345678899999999999999987 78999999996 5
Q ss_pred eccCCC-----cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEec
Q psy16243 336 SNCRQP-----IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVR 408 (782)
Q Consensus 336 v~~~~~-----~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvR 408 (782)
+|+... .++|+...+ . . .+ ....+.|+.||.++|+++..+ ..+++++++|
T Consensus 131 vyg~~~~~~~~~~~E~~~~~-~--~-----------------~~---~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lR 187 (342)
T PLN02214 131 VYMDPNRDPEAVVDESCWSD-L--D-----------------FC---KNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLN 187 (342)
T ss_pred eeccCCCCCCcccCcccCCC-h--h-----------------hc---cccccHHHHHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 776432 234432100 0 0 00 112378999999999999887 3589999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
|++||||...+.. ......+..+..|.... . ++..+|||||+|+|++++.+
T Consensus 188 p~~vyGp~~~~~~--------------------------~~~~~~~~~~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~a 238 (342)
T PLN02214 188 PVLVLGPPLQPTI--------------------------NASLYHVLKYLTGSAKT-Y--ANLTQAYVDVRDVALAHVLV 238 (342)
T ss_pred CCceECCCCCCCC--------------------------CchHHHHHHHHcCCccc-C--CCCCcCeeEHHHHHHHHHHH
Confidence 9999998643210 00001112233443322 2 34578999999999999999
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+... ..++.||+++ .++++.|+++.+.+.++..
T Consensus 239 l~~~-------------------------~~~g~yn~~~---~~~~~~el~~~i~~~~~~~ 271 (342)
T PLN02214 239 YEAP-------------------------SASGRYLLAE---SARHRGEVVEILAKLFPEY 271 (342)
T ss_pred HhCc-------------------------ccCCcEEEec---CCCCHHHHHHHHHHHCCCC
Confidence 8642 2345899876 3579999999999988643
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=8e-21 Score=204.68 Aligned_cols=190 Identities=23% Similarity=0.176 Sum_probs=137.9
Q ss_pred EecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEeccee
Q psy16243 262 VTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYS 336 (782)
Q Consensus 262 i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v 336 (782)
+.||++++ +.+.++++ ++|+||||||..... ...+..+++|+.||.+|+++|++. +. +|||+||.+|
T Consensus 36 ~~~Dl~d~------~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~V 107 (299)
T PRK09987 36 YCGDFSNP------EGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDYV 107 (299)
T ss_pred ccCCCCCH------HHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccceE
Confidence 35899887 77888877 479999999987543 234567789999999999999997 54 7999999999
Q ss_pred ccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEe
Q psy16243 337 NCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIA 414 (782)
Q Consensus 337 ~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G 414 (782)
|+... ++.|+..+ .+.+.||.||..+|+++..+.. +.+|+|++++||
T Consensus 108 y~~~~~~p~~E~~~~-----------------------------~P~~~Yg~sK~~~E~~~~~~~~--~~~ilR~~~vyG 156 (299)
T PRK09987 108 FPGTGDIPWQETDAT-----------------------------APLNVYGETKLAGEKALQEHCA--KHLIFRTSWVYA 156 (299)
T ss_pred ECCCCCCCcCCCCCC-----------------------------CCCCHHHHHHHHHHHHHHHhCC--CEEEEecceecC
Confidence 97643 44454211 1127899999999999987743 569999999999
Q ss_pred ccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccC--CCccccccchhHHHHHHHHhhhhc
Q psy16243 415 TNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHAD--PELVADMVPADNVINCIISAAWNV 492 (782)
Q Consensus 415 ~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~d~VpVDdva~aii~a~~~~ 492 (782)
|....+ ...++..+..|....+.++ +....++..+|+++.++..++...
T Consensus 157 p~~~~~-----------------------------~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~ 207 (299)
T PRK09987 157 GKGNNF-----------------------------AKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKP 207 (299)
T ss_pred CCCCCH-----------------------------HHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccC
Confidence 743110 1134444455655555665 555556666788888777665321
Q ss_pred cccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcc
Q psy16243 493 HQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAV 546 (782)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~ 546 (782)
...++||++++ +++||.|+++.+.+..
T Consensus 208 -------------------------~~~giyni~~~--~~~s~~e~~~~i~~~~ 234 (299)
T PRK09987 208 -------------------------EVAGLYHLVAS--GTTTWHDYAALVFEEA 234 (299)
T ss_pred -------------------------CCCCeEEeeCC--CCccHHHHHHHHHHHH
Confidence 22469999999 8899999999987753
|
|
| >cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-22 Score=176.06 Aligned_cols=91 Identities=46% Similarity=0.943 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhccccccccccccchHHHHhhcCHHHHhhhcccccccccccccc
Q psy16243 576 LHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQLGSFEVHS 655 (782)
Q Consensus 576 ~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~~~~~f~~~~w~f~~~n~~~L~~~l~~~Dr~~F~fd~~~~~~~~~~~ 655 (782)
.|.+|+++.|.+..+.|++|++.++++|+.++.++
T Consensus 2 ~~~lpa~~~d~~~~l~g~~~~~~~~~~k~~~~~~~--------------------------------------------- 36 (92)
T cd09071 2 LHLLPAYLLDLLLRLLGRKPRLLKLYRKIHKLLDL--------------------------------------------- 36 (92)
T ss_pred cccchHHHHHHHHHHhCCChHHHHHHHHHHHHHHH---------------------------------------------
Confidence 47789999999999999999999999999988877
Q ss_pred chhhhhhHhHHHHHHHHHHHHhhhhcccccceeeEEeecchHHHHHhhcCcccccccccCCCCCCHHHHHHHHHHHHHHH
Q psy16243 656 TLNTLVSTRSLKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQLDWEKYMFWHIRGIRAY 735 (782)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~f~~~n~~~l~~~~~~~d~~~f~~~~~~~~w~~y~~~~~~G~~~y 735 (782)
++||++++|+|+++|+++|++.|+++||+.|+||+++|||++|+++|++|+|+|
T Consensus 37 --------------------------~~~Ft~~~w~F~~~n~~~L~~~l~~~Dr~~F~fD~~~idW~~Y~~~~~~G~r~y 90 (92)
T cd09071 37 --------------------------LEYFTTNEWRFDNDNTRALWERLSEEDRELFNFDIRSIDWDDYFENYIPGLRKY 90 (92)
T ss_pred --------------------------hhccccCeEEeeCcHHHHHHHHCCHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999
Q ss_pred hc
Q psy16243 736 LV 737 (782)
Q Consensus 736 ~~ 737 (782)
++
T Consensus 91 ll 92 (92)
T cd09071 91 LL 92 (92)
T ss_pred hC
Confidence 85
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-20 Score=204.63 Aligned_cols=205 Identities=16% Similarity=0.197 Sum_probs=147.7
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.++.++.+|++++ ++++++++++|+|||+||..... ....+.+++|+.|+.+++++|.+..+.++||++||
T Consensus 56 ~~~~~~~~D~~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS 129 (325)
T PLN02989 56 ERLKLFKADLLDE------GSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSS 129 (325)
T ss_pred CceEEEeCCCCCc------hHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecc
Confidence 4788999999998 78888899999999999975432 33467889999999999999987545789999999
Q ss_pred ceeccCCC-------cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcE
Q psy16243 334 AYSNCRQP-------IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPV 404 (782)
Q Consensus 334 ~~v~~~~~-------~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~ 404 (782)
.++++... +++|+.... | .......+.|+.||..+|.++..+ ..++++
T Consensus 130 ~~~~~~~~~~~~~~~~~~E~~~~~---p--------------------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 186 (325)
T PLN02989 130 MAAVLAPETKLGPNDVVDETFFTN---P--------------------SFAEERKQWYVLSKTLAEDAAWRFAKDNEIDL 186 (325)
T ss_pred hhheecCCccCCCCCccCcCCCCc---h--------------------hHhcccccchHHHHHHHHHHHHHHHHHcCCeE
Confidence 87764321 234442111 1 001111268999999999999876 348999
Q ss_pred EEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHH
Q psy16243 405 AMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINC 484 (782)
Q Consensus 405 ~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~a 484 (782)
+++||+++|||...+.. + ....++..+..|..+. +...++|+||+|+|++
T Consensus 187 ~ilR~~~vyGp~~~~~~--------------------~------~~~~~i~~~~~~~~~~----~~~~r~~i~v~Dva~a 236 (325)
T PLN02989 187 IVLNPGLVTGPILQPTL--------------------N------FSVAVIVELMKGKNPF----NTTHHRFVDVRDVALA 236 (325)
T ss_pred EEEcCCceeCCCCCCCC--------------------C------chHHHHHHHHcCCCCC----CCcCcCeeEHHHHHHH
Confidence 99999999998654321 0 0112333444443321 1345799999999999
Q ss_pred HHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 485 IISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 485 ii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
++.++... ...++||++ + .+++++|+++.+.+.++.
T Consensus 237 ~~~~l~~~-------------------------~~~~~~ni~-~--~~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 237 HVKALETP-------------------------SANGRYIID-G--PVVTIKDIENVLREFFPD 272 (325)
T ss_pred HHHHhcCc-------------------------ccCceEEEe-c--CCCCHHHHHHHHHHHCCC
Confidence 99887542 124589994 5 579999999999998864
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=206.34 Aligned_cols=309 Identities=13% Similarity=0.031 Sum_probs=195.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.++.|+|||.+|+.|..+ .+.|.. .+.+|+++.|...... .+++..+...
T Consensus 4 ~~~~~vlVTGatGfiG~~l----~~~L~~---------------~G~~V~~~~r~~~~~~-~~~~~~~~~~--------- 54 (340)
T PLN02653 4 PPRKVALITGITGQDGSYL----TEFLLS---------------KGYEVHGIIRRSSNFN-TQRLDHIYID--------- 54 (340)
T ss_pred CCCCEEEEECCCCccHHHH----HHHHHH---------------CCCEEEEEeccccccc-ccchhhhccc---------
Confidence 4578999999555555444 233322 1567888877543110 1112211100
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCc
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLK 326 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~ 326 (782)
......++.++.+|+++. +++..+++. +|+|||+||..... ......+++|+.||.+++++|++. +++
T Consensus 55 ~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~ 127 (340)
T PLN02653 55 PHPNKARMKLHYGDLSDA------SSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQE 127 (340)
T ss_pred cccccCceEEEEecCCCH------HHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccc
Confidence 001123688999999987 778887775 69999999975433 233456789999999999999987 443
Q ss_pred -----eEEEEecceeccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 327 -----SFVHVSTAYSNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 327 -----~fV~vST~~v~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
+|||+||.++||... ++.|+.. . ...+.|+.||.++|.++..+
T Consensus 128 ~~~~~~~v~~Ss~~vyg~~~~~~~E~~~--------------------------~---~p~~~Y~~sK~~~e~~~~~~~~ 178 (340)
T PLN02653 128 TGRQIKYYQAGSSEMYGSTPPPQSETTP--------------------------F---HPRSPYAVAKVAAHWYTVNYRE 178 (340)
T ss_pred cccceeEEEeccHHHhCCCCCCCCCCCC--------------------------C---CCCChhHHHHHHHHHHHHHHHH
Confidence 899999999998754 3444311 0 11278999999999999887
Q ss_pred CCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCce-eeeccCCCccccccc
Q psy16243 399 GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLL-RSMHADPELVADMVP 477 (782)
Q Consensus 399 ~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~Vp 477 (782)
..+++++..|+.+++||...+ ..... ....++..+..|.. ....|++++.+||+|
T Consensus 179 ~~~~~~~~~~~~~~~gp~~~~----------------------~~~~~--~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~ 234 (340)
T PLN02653 179 AYGLFACNGILFNHESPRRGE----------------------NFVTR--KITRAVGRIKVGLQKKLFLGNLDASRDWGF 234 (340)
T ss_pred HcCCeEEEeeeccccCCCCCc----------------------ccchh--HHHHHHHHHHcCCCCceEeCCCcceeccee
Confidence 347888888998888874221 00000 00112233344543 344588999999999
Q ss_pred hhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCcceec
Q psy16243 478 ADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWA 557 (782)
Q Consensus 478 VDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~~~~~ 557 (782)
|+|+|++++.++... ..++||++++ +++|+.|+++.+.+..+...-....+.
T Consensus 235 v~D~a~a~~~~~~~~--------------------------~~~~yni~~g--~~~s~~e~~~~i~~~~g~~~~~~~~~~ 286 (340)
T PLN02653 235 AGDYVEAMWLMLQQE--------------------------KPDDYVVATE--ESHTVEEFLEEAFGYVGLNWKDHVEID 286 (340)
T ss_pred HHHHHHHHHHHHhcC--------------------------CCCcEEecCC--CceeHHHHHHHHHHHcCCCCCcceeeC
Confidence 999999999888542 1468999999 899999999999998874210000111
Q ss_pred eeeEeccchHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhh
Q psy16243 558 YCFTLNKYKSIHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSE 609 (782)
Q Consensus 558 ~~~~~~~~~~~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~ 609 (782)
+.. ... ..... ......+++..+||+|+. .+.+-+.+..+
T Consensus 287 ~~~-~~~----~~~~~------~~~d~~k~~~~lgw~p~~-~l~~gi~~~~~ 326 (340)
T PLN02653 287 PRY-FRP----AEVDN------LKGDASKAREVLGWKPKV-GFEQLVKMMVD 326 (340)
T ss_pred ccc-CCc----ccccc------ccCCHHHHHHHhCCCCCC-CHHHHHHHHHH
Confidence 100 000 00000 012457788889999985 44444544443
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-21 Score=207.54 Aligned_cols=183 Identities=19% Similarity=0.125 Sum_probs=134.1
Q ss_pred CceEEEEcCcccCch-hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceeccCCC--cccccccCCCCChhHHHHH
Q psy16243 284 NIHVVFHCAATVRFD-AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQI 360 (782)
Q Consensus 284 ~vdiViH~Aa~v~f~-~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~ 360 (782)
++|+|||+||..... ......++.|+.||.+|+++|++. ++ +|||+||+++|+... .++|+...
T Consensus 68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~~~~~~~~E~~~~----------- 134 (308)
T PRK11150 68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTDDFIEEREYE----------- 134 (308)
T ss_pred CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCcCCCCCCccCCCC-----------
Confidence 589999999854321 233457899999999999999987 55 699999999998643 33443211
Q ss_pred HHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCC
Q psy16243 361 TELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKE 438 (782)
Q Consensus 361 ~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~ 438 (782)
.+.+.|+.||.++|+++..+ ..+++++++||+++|||...+..
T Consensus 135 ------------------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~----------------- 179 (308)
T PRK11150 135 ------------------KPLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKG----------------- 179 (308)
T ss_pred ------------------CCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCC-----------------
Confidence 11278999999999999887 35899999999999998643210
Q ss_pred CcccccccccchhhHHHHhhcCceee-eccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCC
Q psy16243 439 PIPGWINNHYGPTGIVAGAGLGLLRS-MHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDD 517 (782)
Q Consensus 439 ~~~gw~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (782)
.... ....+...+..|..+. ..++++..+|++||||++++++.++...
T Consensus 180 ----~~~~--~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~------------------------- 228 (308)
T PRK11150 180 ----SMAS--VAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG------------------------- 228 (308)
T ss_pred ----ccch--hHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC-------------------------
Confidence 0000 0011234455565433 3466778999999999999998877531
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 518 TDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 518 ~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
.+++||++++ .++++.|+++.+.+..+.
T Consensus 229 -~~~~yni~~~--~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 229 -VSGIFNCGTG--RAESFQAVADAVLAYHKK 256 (308)
T ss_pred -CCCeEEcCCC--CceeHHHHHHHHHHHhCC
Confidence 2469999999 889999999999998764
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-20 Score=208.61 Aligned_cols=211 Identities=18% Similarity=0.132 Sum_probs=154.7
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHc--------cC
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEM--------KQ 324 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~--------~~ 324 (782)
+++++.+|+++. +++.+++++ +|+|||+||.+... ...++.+++|+.||.+++++|++. ++
T Consensus 51 ~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~ 124 (352)
T PRK10084 51 RYVFEHADICDR------AELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKN 124 (352)
T ss_pred ceEEEEecCCCH------HHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhcccccccccc
Confidence 578899999988 788888864 89999999976432 235678999999999999999864 24
Q ss_pred CceEEEEecceeccCCCc---ccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--C
Q psy16243 325 LKSFVHVSTAYSNCRQPI---IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--G 399 (782)
Q Consensus 325 ~~~fV~vST~~v~~~~~~---i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~ 399 (782)
+++|||+||.++|+.... +.+....++.+ +-++. .+.+.|+.||.++|.++..+ .
T Consensus 125 ~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~-----------------E~~~~---~p~~~Y~~sK~~~E~~~~~~~~~ 184 (352)
T PRK10084 125 AFRFHHISTDEVYGDLPHPDEVENSEELPLFT-----------------ETTAY---APSSPYSASKASSDHLVRAWLRT 184 (352)
T ss_pred ceeEEEecchhhcCCCCccccccccccCCCcc-----------------ccCCC---CCCChhHHHHHHHHHHHHHHHHH
Confidence 679999999999986321 10000000000 00111 12278999999999999876 3
Q ss_pred CCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchh
Q psy16243 400 AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPAD 479 (782)
Q Consensus 400 ~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVD 479 (782)
.+++++++|++.||||...+.. ....++..+..|....+.++++..+|+|||+
T Consensus 185 ~g~~~vilr~~~v~Gp~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~ 237 (352)
T PRK10084 185 YGLPTIVTNCSNNYGPYHFPEK---------------------------LIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237 (352)
T ss_pred hCCCEEEEeccceeCCCcCccc---------------------------hHHHHHHHHhcCCCeEEeCCCCeEEeeEEHH
Confidence 4899999999999998642211 0113444455565555678899999999999
Q ss_pred HHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 480 NVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 480 dva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
|++.+++.++... ..+++||++++ +++++.++++.+.+..+.
T Consensus 238 D~a~a~~~~l~~~-------------------------~~~~~yni~~~--~~~s~~~~~~~i~~~~~~ 279 (352)
T PRK10084 238 DHARALYKVVTEG-------------------------KAGETYNIGGH--NEKKNLDVVLTICDLLDE 279 (352)
T ss_pred HHHHHHHHHHhcC-------------------------CCCceEEeCCC--CcCcHHHHHHHHHHHhcc
Confidence 9999998887532 24689999999 889999999999988775
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.6e-20 Score=204.29 Aligned_cols=260 Identities=15% Similarity=0.152 Sum_probs=167.2
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
..+.|+|||.+|+.|..+ .+.|.. .+.+|.++.|..... +.+......
T Consensus 4 ~~k~iLVTGatGfIGs~l----~~~L~~---------------~G~~V~~~~r~~~~~---~~~~~~~~~---------- 51 (351)
T PLN02650 4 QKETVCVTGASGFIGSWL----VMRLLE---------------RGYTVRATVRDPANV---KKVKHLLDL---------- 51 (351)
T ss_pred CCCEEEEeCCcHHHHHHH----HHHHHH---------------CCCEEEEEEcCcchh---HHHHHHHhc----------
Confidence 357899999555544444 223321 256888888864321 112111110
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch--hhHHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD--AHLKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
+....++.++.+|++++ +.+.++++++|+|||+|+..... .+..+.+++|+.||.+++++|.+.+.+++|||
T Consensus 52 ~~~~~~~~~v~~Dl~d~------~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~ 125 (351)
T PLN02650 52 PGATTRLTLWKADLAVE------GSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVF 125 (351)
T ss_pred cCCCCceEEEEecCCCh------hhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEE
Confidence 11113688999999998 77888899999999999976432 22346789999999999999998745789999
Q ss_pred EecceeccCCC---c-ccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcE
Q psy16243 331 VSTAYSNCRQP---I-IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPV 404 (782)
Q Consensus 331 vST~~v~~~~~---~-i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~ 404 (782)
+||.++++... + .+|+...+ .+ .+..+....+.|+.||.++|.++..+ ..|+++
T Consensus 126 ~SS~~~~~~~~~~~~~~~E~~~~~-~~-------------------~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~ 185 (351)
T PLN02650 126 TSSAGTVNVEEHQKPVYDEDCWSD-LD-------------------FCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDF 185 (351)
T ss_pred ecchhhcccCCCCCCccCcccCCc-hh-------------------hhhccccccchHHHHHHHHHHHHHHHHHHcCCeE
Confidence 99997765421 1 23331100 00 00000011258999999999999887 358999
Q ss_pred EEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHH--hhcCceeeeccCCCccccccchhHHH
Q psy16243 405 AMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAG--AGLGLLRSMHADPELVADMVPADNVI 482 (782)
Q Consensus 405 ~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~d~VpVDdva 482 (782)
+++||++||||...+.. | ..++.. ...|.... .+.. ..+|||||+|+|
T Consensus 186 ~ilRp~~v~Gp~~~~~~--------~--------------------~~~~~~~~~~~~~~~~-~~~~-~~r~~v~V~Dva 235 (351)
T PLN02650 186 ISIIPTLVVGPFISTSM--------P--------------------PSLITALSLITGNEAH-YSII-KQGQFVHLDDLC 235 (351)
T ss_pred EEECCCceECCCCCCCC--------C--------------------ccHHHHHHHhcCCccc-cCcC-CCcceeeHHHHH
Confidence 99999999998653210 0 011111 12222111 1112 247999999999
Q ss_pred HHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 483 NCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 483 ~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
++++.++... ...++| ++++ .++++.|+++.+.+..+.
T Consensus 236 ~a~~~~l~~~-------------------------~~~~~~-i~~~--~~~s~~el~~~i~~~~~~ 273 (351)
T PLN02650 236 NAHIFLFEHP-------------------------AAEGRY-ICSS--HDATIHDLAKMLREKYPE 273 (351)
T ss_pred HHHHHHhcCc-------------------------CcCceE-EecC--CCcCHHHHHHHHHHhCcc
Confidence 9999988542 123467 5555 679999999999987654
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-20 Score=200.70 Aligned_cols=208 Identities=24% Similarity=0.258 Sum_probs=158.1
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCc-eEEEEcCcccCchhhH----HHHHHhhHHHHHHHHHHHHHccCCceEEEE
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNI-HVVFHCAATVRFDAHL----KVAVSINLRATKALLEMAKEMKQLKSFVHV 331 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~v-diViH~Aa~v~f~~~~----~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~v 331 (782)
..+.++.+|+++. +....+.+.+ |+|||+||........ .++..+|+.||++++++|++. ++++|||.
T Consensus 42 ~~~~~~~~d~~~~------~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~ 114 (314)
T COG0451 42 SGVEFVVLDLTDR------DLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFA 114 (314)
T ss_pred cccceeeecccch------HHHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEe
Confidence 4678899999987 6677777778 9999999987655442 358899999999999999994 89999998
Q ss_pred ecceeccCC--C-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEE
Q psy16243 332 STAYSNCRQ--P-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAM 406 (782)
Q Consensus 332 ST~~v~~~~--~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~I 406 (782)
||.++++.. . .+.|+. .+ ..+. +.|+.||..+|+++..+. .+++++|
T Consensus 115 ss~~~~~~~~~~~~~~E~~-~~------------------------~~p~---~~Yg~sK~~~E~~~~~~~~~~~~~~~i 166 (314)
T COG0451 115 SSVSVVYGDPPPLPIDEDL-GP------------------------PRPL---NPYGVSKLAAEQLLRAYARLYGLPVVI 166 (314)
T ss_pred CCCceECCCCCCCCccccc-CC------------------------CCCC---CHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 888877753 1 445542 11 1111 479999999999999985 4899999
Q ss_pred ecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCce-eeeccCCCccccccchhHHHHHH
Q psy16243 407 VRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLL-RSMHADPELVADMVPADNVINCI 485 (782)
Q Consensus 407 vRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~VpVDdva~ai 485 (782)
+||+.||||...+.. + +|. ...++..+..+.. ....+++...+++++|+|++.++
T Consensus 167 lR~~~vyGp~~~~~~--------~-----------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 222 (314)
T COG0451 167 LRPFNVYGPGDKPDL--------S-----------SGV-----VSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADAL 222 (314)
T ss_pred EeeeeeeCCCCCCCC--------C-----------cCc-----HHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHH
Confidence 999999998654310 0 111 1123444555654 56777888889999999999999
Q ss_pred HHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCC-cccHHHHHHHHHhcccccCC
Q psy16243 486 ISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQK-PIKWKEFMALNEKAVPEIPS 551 (782)
Q Consensus 486 i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~-~~t~~el~~~i~~~~~~~p~ 551 (782)
+.++... ... +||++++ . +++.+|+.+.+.+..+..+.
T Consensus 223 ~~~~~~~-------------------------~~~-~~ni~~~--~~~~~~~e~~~~~~~~~~~~~~ 261 (314)
T COG0451 223 LLALENP-------------------------DGG-VFNIGSG--TAEITVRELAEAVAEAVGSKAP 261 (314)
T ss_pred HHHHhCC-------------------------CCc-EEEeCCC--CCcEEHHHHHHHHHHHhCCCCc
Confidence 9998753 123 9999998 5 89999999999998876543
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=200.72 Aligned_cols=212 Identities=16% Similarity=0.196 Sum_probs=141.8
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchh-----hHHH-----HHHhhHHHHHHHHHHHHHccCCc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDA-----HLKV-----AVSINLRATKALLEMAKEMKQLK 326 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~-----~~~~-----~~~~Nv~gt~~Lle~a~~~~~~~ 326 (782)
.+++++.+|++++ +.+.++++++|+|||+||...... +... .+++|+.||.+++++|++.++++
T Consensus 58 ~~~~~~~~Dl~~~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~ 131 (353)
T PLN02896 58 DRLRLFRADLQEE------GSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVK 131 (353)
T ss_pred CeEEEEECCCCCH------HHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCcc
Confidence 3688999999988 788888899999999999864321 2333 34556799999999998875689
Q ss_pred eEEEEecceeccCCC-------cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 327 SFVHVSTAYSNCRQP-------IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 327 ~fV~vST~~v~~~~~-------~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
+||++||.++|+... +++|+. +.|.+. ..+ +....+.|+.||.++|+++..+
T Consensus 132 ~~v~~SS~~vyg~~~~~~~~~~~~~E~~-~~p~~~-----------------~~~--~~~~~~~Y~~sK~~~E~~~~~~~ 191 (353)
T PLN02896 132 RVVFTSSISTLTAKDSNGRWRAVVDETC-QTPIDH-----------------VWN--TKASGWVYVLSKLLTEEAAFKYA 191 (353)
T ss_pred EEEEEechhhccccccCCCCCCccCccc-CCcHHH-----------------hhc--cCCCCccHHHHHHHHHHHHHHHH
Confidence 999999999997421 234431 111100 000 0011257999999999999887
Q ss_pred -CCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceee--ecc---CCCcc
Q psy16243 399 -GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRS--MHA---DPELV 472 (782)
Q Consensus 399 -~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~--~~~---~~~~~ 472 (782)
..+++++++||++||||...+.. | .+.. .+.....|.... ..+ .....
T Consensus 192 ~~~~~~~~~lR~~~vyGp~~~~~~--------~-----------~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~ 245 (353)
T PLN02896 192 KENGIDLVSVITTTVAGPFLTPSV--------P-----------SSIQ-------VLLSPITGDSKLFSILSAVNSRMGS 245 (353)
T ss_pred HHcCCeEEEEcCCcccCCCcCCCC--------C-----------chHH-------HHHHHhcCCccccccccccccccCc
Confidence 35899999999999998654210 1 1111 111111232111 111 11124
Q ss_pred ccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 473 ADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 473 ~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
+|||||+|+|++++.++... ....+|++ ++ .+++++|+++.+.+.++.
T Consensus 246 ~dfi~v~Dva~a~~~~l~~~-------------------------~~~~~~~~-~~--~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 246 IALVHIEDICDAHIFLMEQT-------------------------KAEGRYIC-CV--DSYDMSELINHLSKEYPC 293 (353)
T ss_pred eeEEeHHHHHHHHHHHHhCC-------------------------CcCccEEe-cC--CCCCHHHHHHHHHHhCCC
Confidence 69999999999999988542 12346764 55 689999999999998763
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-20 Score=190.53 Aligned_cols=267 Identities=23% Similarity=0.218 Sum_probs=187.9
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccch-hhHHHHHHHhhcccccccccccC
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRAT-KALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~-~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+.|+||| |.|+. ++|.+.+|.. .++.|.++.+-.+. .....|++++..
T Consensus 2 ~~~VLVtG-----gaGyi---------Gsht~l~L~~-----~gy~v~~vDNl~n~~~~sl~r~~~l~~----------- 51 (343)
T KOG1371|consen 2 GKHVLVTG-----GAGYI---------GSHTVLALLK-----RGYGVVIVDNLNNSYLESLKRVRQLLG----------- 51 (343)
T ss_pred CcEEEEec-----CCcce---------ehHHHHHHHh-----CCCcEEEEecccccchhHHHHHHHhcC-----------
Confidence 46899999 66663 3444444432 26777777776432 233445554432
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcCc--eEEEEcCcccCchhhHH---HHHHhhHHHHHHHHHHHHHccCCce
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNI--HVVFHCAATVRFDAHLK---VAVSINLRATKALLEMAKEMKQLKS 327 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~v--diViH~Aa~v~f~~~~~---~~~~~Nv~gt~~Lle~a~~~~~~~~ 327 (782)
+ ..+|.++.+|++|. +.++++++.+ |.|+|.||.....++.+ .++..|+.||.+|++.|++. +++.
T Consensus 52 -~-~~~v~f~~~Dl~D~------~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~ 122 (343)
T KOG1371|consen 52 -E-GKSVFFVEGDLNDA------EALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKA 122 (343)
T ss_pred -C-CCceEEEEeccCCH------HHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCce
Confidence 1 36899999999998 8899999864 99999999876665544 57889999999999999998 5999
Q ss_pred EEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCc
Q psy16243 328 FVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMP 403 (782)
Q Consensus 328 fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp 403 (782)
+||.||+.|||.+. +++|+.. . +.+.|.||.||...|.++.... .++.
T Consensus 123 ~V~sssatvYG~p~~ip~te~~~---t-------------------------~~p~~pyg~tK~~iE~i~~d~~~~~~~~ 174 (343)
T KOG1371|consen 123 LVFSSSATVYGLPTKVPITEEDP---T-------------------------DQPTNPYGKTKKAIEEIIHDYNKAYGWK 174 (343)
T ss_pred EEEecceeeecCcceeeccCcCC---C-------------------------CCCCCcchhhhHHHHHHHHhhhccccce
Confidence 99999999999876 5556521 1 1122899999999999999884 3688
Q ss_pred EEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCcee--------eeccCCCccccc
Q psy16243 404 VAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLR--------SMHADPELVADM 475 (782)
Q Consensus 404 ~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~d~ 475 (782)
++++|.++++|..-.+.+|. .|-.+.-|.. ..+..++.|..+ ....+++.++|+
T Consensus 175 ~~~LRyfn~~ga~p~Gr~ge-----~p~~~~nnl~-------------p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdy 236 (343)
T KOG1371|consen 175 VTGLRYFNVIGAHPSGRIGE-----APLGIPNNLL-------------PYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDY 236 (343)
T ss_pred EEEEEeccccCccccCccCC-----CCccCccccc-------------ccccchhhcccccceeecCcccccCCCeeecc
Confidence 99999999999443332221 1111111111 011112222211 123357999999
Q ss_pred cchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 476 VPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 476 VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
++|-|.|.+.+.++.+.... ...++||++++ .+.+..++...+.+..+..
T Consensus 237 i~v~Dla~~h~~al~k~~~~----------------------~~~~i~Nlgtg--~g~~V~~lv~a~~k~~g~~ 286 (343)
T KOG1371|consen 237 IHVLDLADGHVAALGKLRGA----------------------AEFGVYNLGTG--KGSSVLELVTAFEKALGVK 286 (343)
T ss_pred eeeEehHHHHHHHhhccccc----------------------hheeeEeecCC--CCccHHHHHHHHHHHhcCC
Confidence 99999999999999775221 23459999999 8999999999999988753
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.6e-20 Score=198.21 Aligned_cols=248 Identities=15% Similarity=0.061 Sum_probs=162.9
Q ss_pred EEecCCCCCCCCCCHHhHHHHhc----CceEEEEcCcccCch-hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecce
Q psy16243 261 AVTGDCLKPGVGINSEDRQTLVD----NIHVVFHCAATVRFD-AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAY 335 (782)
Q Consensus 261 ~i~gDi~~~~lGl~~~~~~~l~~----~vdiViH~Aa~v~f~-~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~ 335 (782)
.+.+|+.++ +.++.+.+ ++|+|+|+||..... .+....+++|+.|+.+++++|++. ++ +|||+||++
T Consensus 45 ~~~~d~~~~------~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~ 116 (314)
T TIGR02197 45 VIADYIDKE------DFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAA 116 (314)
T ss_pred eeeccCcch------hHHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHH
Confidence 456777765 55665553 799999999975433 344567889999999999999986 55 799999999
Q ss_pred eccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----CCCCcEEEecCC
Q psy16243 336 SNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG----GAGMPVAMVRPS 410 (782)
Q Consensus 336 v~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~----~~glp~~IvRp~ 410 (782)
+|+... ...|+.. +. ...+.|+.||..+|.++.++ ..+++++++||+
T Consensus 117 vy~~~~~~~~e~~~-------------------------~~---~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~ 168 (314)
T TIGR02197 117 TYGDGEAGFREGRE-------------------------LE---RPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYF 168 (314)
T ss_pred hcCCCCCCcccccC-------------------------cC---CCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEe
Confidence 998643 2222210 00 11278999999999999864 236789999999
Q ss_pred eEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeec------cCCCccccccchhHHHHH
Q psy16243 411 IVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMH------ADPELVADMVPADNVINC 484 (782)
Q Consensus 411 ~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~d~VpVDdva~a 484 (782)
.+|||...+.. + ..+ ....++..+..|....+. +++++.++++||||++++
T Consensus 169 ~vyG~~~~~~~--------------------~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~ 225 (314)
T TIGR02197 169 NVYGPREYHKG--------------------K-MAS--VAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDV 225 (314)
T ss_pred eccCCCCCCCC--------------------C-ccc--HHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHH
Confidence 99998643211 0 000 011234444455433332 467888999999999999
Q ss_pred HHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCcceeceeeEecc
Q psy16243 485 IISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNK 564 (782)
Q Consensus 485 ii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~~~~~~~~~~~~ 564 (782)
++.++.. ...++||++++ .++|+.|+++.+.+.++..+.......|.....
T Consensus 226 i~~~~~~--------------------------~~~~~yni~~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~- 276 (314)
T TIGR02197 226 NLWLLEN--------------------------GVSGIFNLGTG--RARSFNDLADAVFKALGKDEKIEYIPMPEALRG- 276 (314)
T ss_pred HHHHHhc--------------------------ccCceEEcCCC--CCccHHHHHHHHHHHhCCCCcceeccCcccccc-
Confidence 9988854 12469999999 899999999999998875431111111111000
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHH
Q psy16243 565 YKSIHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKF 607 (782)
Q Consensus 565 ~~~~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~ 607 (782)
.. ........+++.+.+||+|+. .+.+-+.++
T Consensus 277 -~~---------~~~~~~~~~k~~~~l~~~p~~-~l~~~l~~~ 308 (314)
T TIGR02197 277 -KY---------QYFTQADITKLRAAGYYGPFT-TLEEGVKDY 308 (314)
T ss_pred -cc---------ccccccchHHHHHhcCCCCcc-cHHHHHHHH
Confidence 00 001123457778889999864 444444444
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=194.53 Aligned_cols=210 Identities=21% Similarity=0.286 Sum_probs=164.4
Q ss_pred ccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCccc--Cchh-hHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 256 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATV--RFDA-HLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 256 ~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v--~f~~-~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
..+++.+.||+.+. ..+...++++ .|+||||.. .+.. ..+...++||.||++++++|.+. +++++||+|
T Consensus 54 ~~~v~~~~~D~~~~------~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtS 125 (361)
T KOG1430|consen 54 SGRVTVILGDLLDA------NSISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTS 125 (361)
T ss_pred CCceeEEecchhhh------hhhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEec
Confidence 45899999999988 7788888999 888888864 3444 36778999999999999999998 999999999
Q ss_pred cceeccCCCc---ccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEe
Q psy16243 333 TAYSNCRQPI---IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMV 407 (782)
Q Consensus 333 T~~v~~~~~~---i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~Iv 407 (782)
|++|...... .+|+. + .+..+...|+.||+.||.++.+++ .++.++++
T Consensus 126 s~~Vvf~g~~~~n~~E~~-p--------------------------~p~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aL 178 (361)
T KOG1430|consen 126 SAYVVFGGEPIINGDESL-P--------------------------YPLKHIDPYGESKALAEKLVLEANGSDDLYTCAL 178 (361)
T ss_pred CceEEeCCeecccCCCCC-C--------------------------CccccccccchHHHHHHHHHHHhcCCCCeeEEEE
Confidence 9999866442 12221 1 113345799999999999999995 47999999
Q ss_pred cCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHH
Q psy16243 408 RPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIIS 487 (782)
Q Consensus 408 Rp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~ 487 (782)
||+.||||.+.-. +| .+...+..|......++++..-|+++++.|+.+++.
T Consensus 179 R~~~IYGpgd~~~-------------------~~----------~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahil 229 (361)
T KOG1430|consen 179 RPPGIYGPGDKRL-------------------LP----------KIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHIL 229 (361)
T ss_pred ccccccCCCCccc-------------------cH----------HHHHHHHccCceEEeeccccccceEEechhHHHHHH
Confidence 9999999864311 11 566777788888888899999999999999999999
Q ss_pred hhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 488 AAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 488 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
|....... .....+++|+|+++ +|+..-++...+.+.+|..+
T Consensus 230 A~~aL~~~-------------------~~~~~Gq~yfI~d~--~p~~~~~~~~~l~~~lg~~~ 271 (361)
T KOG1430|consen 230 AARALLDK-------------------SPSVNGQFYFITDD--TPVRFFDFLSPLVKALGYCL 271 (361)
T ss_pred HHHHHHhc-------------------CCccCceEEEEeCC--CcchhhHHHHHHHHhcCCCC
Confidence 88764311 13467999999999 78776666667777777543
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.8e-20 Score=200.47 Aligned_cols=243 Identities=19% Similarity=0.214 Sum_probs=189.0
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
...+|+|+|||..|..|+.++ +.++ + .++.++.++.|.... +..++..++.
T Consensus 247 ~~~gK~vLVTGagGSiGsel~----~qil-------------~-~~p~~i~l~~~~E~~---~~~i~~el~~-------- 297 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELC----RQIL-------------K-FNPKEIILFSRDEYK---LYLIDMELRE-------- 297 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHH----HHHH-------------h-cCCCEEEEecCchHH---HHHHHHHHHh--------
Confidence 367999999997666665542 2221 1 247899999987543 2333322211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCc---hhhHHHHHHhhHHHHHHHHHHHHHccCC
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRF---DAHLKVAVSINLRATKALLEMAKEMKQL 325 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~Lle~a~~~~~~ 325 (782)
..| ..++.++.||++|. +.+..++++ +|+|||+||.-+. ..++.+++++||.||+|++++|.++ ++
T Consensus 298 ~~~--~~~~~~~igdVrD~------~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V 368 (588)
T COG1086 298 KFP--ELKLRFYIGDVRDR------DRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GV 368 (588)
T ss_pred hCC--CcceEEEecccccH------HHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CC
Confidence 112 36899999999998 889999998 9999999998543 3567899999999999999999998 99
Q ss_pred ceEEEEecc-eeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCC----
Q psy16243 326 KSFVHVSTA-YSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGA---- 400 (782)
Q Consensus 326 ~~fV~vST~-~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~---- 400 (782)
++||.+||. +|++ +|.||.||.+||.++.+++.
T Consensus 369 ~~~V~iSTDKAV~P------------------------------------------tNvmGaTKr~aE~~~~a~~~~~~~ 406 (588)
T COG1086 369 KKFVLISTDKAVNP------------------------------------------TNVMGATKRLAEKLFQAANRNVSG 406 (588)
T ss_pred CEEEEEecCcccCC------------------------------------------chHhhHHHHHHHHHHHHHhhccCC
Confidence 999999997 3322 29999999999999998833
Q ss_pred -CCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchh
Q psy16243 401 -GMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPAD 479 (782)
Q Consensus 401 -glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVD 479 (782)
+-.++++|.|+|.|+..+-+| -+...+..|.. ...-+++..+=|.-++
T Consensus 407 ~~T~f~~VRFGNVlGSrGSViP------------------------------lFk~QI~~Ggp-lTvTdp~mtRyfMTI~ 455 (588)
T COG1086 407 TGTRFCVVRFGNVLGSRGSVIP------------------------------LFKKQIAEGGP-LTVTDPDMTRFFMTIP 455 (588)
T ss_pred CCcEEEEEEecceecCCCCCHH------------------------------HHHHHHHcCCC-ccccCCCceeEEEEHH
Confidence 478999999999998755444 35556666743 3445789999999999
Q ss_pred HHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCC
Q psy16243 480 NVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPS 551 (782)
Q Consensus 480 dva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~ 551 (782)
++++.++.|... ...+++|-+-.| .|++..|+++.+.+..|..|.
T Consensus 456 EAv~LVlqA~a~-------------------------~~gGeifvldMG--epvkI~dLAk~mi~l~g~~~~ 500 (588)
T COG1086 456 EAVQLVLQAGAI-------------------------AKGGEIFVLDMG--EPVKIIDLAKAMIELAGQTPP 500 (588)
T ss_pred HHHHHHHHHHhh-------------------------cCCCcEEEEcCC--CCeEHHHHHHHHHHHhCCCCC
Confidence 999999998864 257899999998 899999999999998885554
|
|
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.2e-20 Score=186.33 Aligned_cols=252 Identities=14% Similarity=0.092 Sum_probs=183.6
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
.....|+|||..|++|++| .+.|..+ +..|+++..-..+.. +.+...
T Consensus 25 ~~~lrI~itGgaGFIgSHL----vdkLm~e---------------gh~VIa~Dn~ftg~k--~n~~~~------------ 71 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHL----VDKLMTE---------------GHEVIALDNYFTGRK--ENLEHW------------ 71 (350)
T ss_pred CCCcEEEEecCcchHHHHH----HHHHHhc---------------CCeEEEEecccccch--hhcchh------------
Confidence 3458899999555555554 2334322 467777776544321 111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCccc---CchhhHHHHHHhhHHHHHHHHHHHHHccCCceE
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATV---RFDAHLKVAVSINLRATKALLEMAKEMKQLKSF 328 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v---~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~f 328 (782)
.....++.+.-|+..+ ++.+||.|+|+|+.. .|..+.-..+.+|+.||.+++-+|++. + +||
T Consensus 72 --~~~~~fel~~hdv~~p-----------l~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~ 136 (350)
T KOG1429|consen 72 --IGHPNFELIRHDVVEP-----------LLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARF 136 (350)
T ss_pred --ccCcceeEEEeechhH-----------HHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceE
Confidence 1234667777787765 677899999999874 455566678889999999999999986 3 999
Q ss_pred EEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcE
Q psy16243 329 VHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPV 404 (782)
Q Consensus 329 V~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~ 404 (782)
++.||+.|||++. +-.|+.- .--++.+....|...|.++|.++.++ ..|+.+
T Consensus 137 l~aSTseVYgdp~~hpq~e~yw------------------------g~vnpigpr~cydegKr~aE~L~~~y~k~~giE~ 192 (350)
T KOG1429|consen 137 LLASTSEVYGDPLVHPQVETYW------------------------GNVNPIGPRSCYDEGKRVAETLCYAYHKQEGIEV 192 (350)
T ss_pred EEeecccccCCcccCCCccccc------------------------cccCcCCchhhhhHHHHHHHHHHHHhhcccCcEE
Confidence 9999999999854 2222210 00112233378999999999999999 459999
Q ss_pred EEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHH
Q psy16243 405 AMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINC 484 (782)
Q Consensus 405 ~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~a 484 (782)
.|.|+.+.|||... |.+. .....++..++++....++|+|.+.+.|.+|+|++++
T Consensus 193 rIaRifNtyGPrm~------------------------~~dg-rvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Veg 247 (350)
T KOG1429|consen 193 RIARIFNTYGPRMH------------------------MDDG-RVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEG 247 (350)
T ss_pred EEEeeecccCCccc------------------------cCCC-hhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHH
Confidence 99999999998643 3321 1223577788899999999999999999999999999
Q ss_pred HHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 485 IISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 485 ii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
++..++... ..-+|++++ +.+|+.|+++++.+..+.
T Consensus 248 ll~Lm~s~~--------------------------~~pvNiGnp--~e~Tm~elAemv~~~~~~ 283 (350)
T KOG1429|consen 248 LLRLMESDY--------------------------RGPVNIGNP--GEFTMLELAEMVKELIGP 283 (350)
T ss_pred HHHHhcCCC--------------------------cCCcccCCc--cceeHHHHHHHHHHHcCC
Confidence 999997641 223899999 899999999999998753
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5e-19 Score=194.02 Aligned_cols=257 Identities=16% Similarity=0.114 Sum_probs=168.6
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
++.++.+|++++ +.+..+++ ++|+|||+|+..... ....+.+++|+.|+.+++++|++. ++++||++|
T Consensus 51 ~~~~~~~Dl~d~------~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S 123 (338)
T PRK10675 51 HPTFVEGDIRNE------ALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSS 123 (338)
T ss_pred CceEEEccCCCH------HHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEec
Confidence 567889999987 67777776 589999999876432 234568899999999999999987 789999999
Q ss_pred cceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC---CCCcEEEe
Q psy16243 333 TAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG---AGMPVAMV 407 (782)
Q Consensus 333 T~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~---~glp~~Iv 407 (782)
|.++|+... .++|+... +...+.|+.+|..+|+++..+. .+++++++
T Consensus 124 s~~~yg~~~~~~~~E~~~~----------------------------~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~il 175 (338)
T PRK10675 124 SATVYGDQPKIPYVESFPT----------------------------GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175 (338)
T ss_pred cHHhhCCCCCCccccccCC----------------------------CCCCChhHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 999998543 34443110 0112789999999999998872 37899999
Q ss_pred cCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCce--eeecc------CCCccccccchh
Q psy16243 408 RPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLL--RSMHA------DPELVADMVPAD 479 (782)
Q Consensus 408 Rp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~--~~~~~------~~~~~~d~VpVD 479 (782)
|++.+||+.... .++|.+ . +...+ ....+..+..+.. ..+.+ ++.+.+++|||+
T Consensus 176 R~~~v~g~~~~~-------~~g~~~-----~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~ 237 (338)
T PRK10675 176 RYFNPVGAHPSG-------DMGEDP-----Q---GIPNN---LMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_pred EeeeecCCCccc-------ccccCC-----C---CChhH---HHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHH
Confidence 999999975321 111100 0 00001 1112233333321 22222 567889999999
Q ss_pred HHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCcceecee
Q psy16243 480 NVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYC 559 (782)
Q Consensus 480 dva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~~~~~~~ 559 (782)
|+|++++.++..... ...+++||++++ +++|+.|+++.+.+..+... ... ..+.
T Consensus 238 D~a~~~~~~~~~~~~----------------------~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~-~~~-~~~~ 291 (338)
T PRK10675 238 DLADGHVAAMEKLAN----------------------KPGVHIYNLGAG--VGSSVLDVVNAFSKACGKPV-NYH-FAPR 291 (338)
T ss_pred HHHHHHHHHHHhhhc----------------------cCCCceEEecCC--CceeHHHHHHHHHHHhCCCC-Cee-eCCC
Confidence 999999988864210 123579999998 89999999999999887532 111 1111
Q ss_pred eEeccchHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHH
Q psy16243 560 FTLNKYKSIHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKF 607 (782)
Q Consensus 560 ~~~~~~~~~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~ 607 (782)
. .. .... ......++...+||+|+. .+-.-+.+.
T Consensus 292 ~---~~----~~~~------~~~~~~k~~~~lg~~p~~-~~~~~~~~~ 325 (338)
T PRK10675 292 R---EG----DLPA------YWADASKADRELNWRVTR-TLDEMAQDT 325 (338)
T ss_pred C---CC----chhh------hhcCHHHHHHHhCCCCcC-cHHHHHHHH
Confidence 0 00 0000 112457778889999974 344444443
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.1e-20 Score=189.67 Aligned_cols=175 Identities=25% Similarity=0.280 Sum_probs=138.8
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCc--eEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNI--HVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~v--diViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
++.++.+|+.+. +.+++++++. |+|||+||..... ....+.++.|+.++.+++++|++. ++++|||+|
T Consensus 43 ~~~~~~~dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~s 115 (236)
T PF01370_consen 43 NVEFVIGDLTDK------EQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLS 115 (236)
T ss_dssp TEEEEESETTSH------HHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred eEEEEEeecccc------ccccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-ccccccccc
Confidence 788999999987 8899998876 9999999986321 345578889999999999999998 679999999
Q ss_pred cceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEec
Q psy16243 333 TAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVR 408 (782)
Q Consensus 333 T~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvR 408 (782)
|..+|+... ++.|+.... ..+.|+.+|..+|+++..+. .+++++++|
T Consensus 116 S~~~y~~~~~~~~~e~~~~~-----------------------------~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R 166 (236)
T PF01370_consen 116 SASVYGDPDGEPIDEDSPIN-----------------------------PLSPYGASKRAAEELLRDYAKKYGLRVTILR 166 (236)
T ss_dssp EGGGGTSSSSSSBETTSGCC-----------------------------HSSHHHHHHHHHHHHHHHHHHHHTSEEEEEE
T ss_pred cccccccccccccccccccc-----------------------------ccccccccccccccccccccccccccccccc
Confidence 999998762 444542211 11679999999999999883 389999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
|+.+|||. .+.. .. ......++..+..|....++++++..++++||+|++++++.+
T Consensus 167 ~~~vyG~~-~~~~---------------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 222 (236)
T PF01370_consen 167 PPNVYGPG-NPNN---------------------NS--SSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAA 222 (236)
T ss_dssp ESEEESTT-SSSS---------------------ST--SSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHH
T ss_pred cccccccc-cccc---------------------cc--ccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHH
Confidence 99999987 1111 00 011224677777888778889999999999999999999999
Q ss_pred hhhc
Q psy16243 489 AWNV 492 (782)
Q Consensus 489 ~~~~ 492 (782)
+.+.
T Consensus 223 ~~~~ 226 (236)
T PF01370_consen 223 LENP 226 (236)
T ss_dssp HHHS
T ss_pred HhCC
Confidence 9774
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.8e-19 Score=191.97 Aligned_cols=208 Identities=16% Similarity=0.131 Sum_probs=145.4
Q ss_pred ecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCc----hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEeccee
Q psy16243 263 TGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRF----DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYS 336 (782)
Q Consensus 263 ~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v 336 (782)
.+|+++. ++++.+++ ++|+||||||.... .....+.++.|+.||.+++++|++. ++++|||+||.+|
T Consensus 32 ~~Dl~~~------~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~v 104 (306)
T PLN02725 32 ELDLTRQ------ADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCI 104 (306)
T ss_pred cCCCCCH------HHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceee
Confidence 3788776 77877776 46999999997542 1344568899999999999999997 7899999999999
Q ss_pred ccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCc-cHHHHHHHHHHHHHHc--CCCCcEEEecCCe
Q psy16243 337 NCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPN-TYALTKQVAEDMVRRG--GAGMPVAMVRPSI 411 (782)
Q Consensus 337 ~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn-~Y~~SK~~aE~ll~~~--~~glp~~IvRp~~ 411 (782)
|+... +++|+.... .| ..+++ .|+.||.++|+++..+ ..+++++++||+.
T Consensus 105 yg~~~~~~~~E~~~~~----------------------~~---~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~ 159 (306)
T PLN02725 105 YPKFAPQPIPETALLT----------------------GP---PEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTN 159 (306)
T ss_pred cCCCCCCCCCHHHhcc----------------------CC---CCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 98532 344432100 00 01113 4999999999998776 3489999999999
Q ss_pred EEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeee-ccCCCccccccchhHHHHHHHHhhh
Q psy16243 412 VIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSM-HADPELVADMVPADNVINCIISAAW 490 (782)
Q Consensus 412 v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~d~VpVDdva~aii~a~~ 490 (782)
+|||.....+ . +...++.+. ..+..+...|..... +++++..+++|||+|++++++.++.
T Consensus 160 vyG~~~~~~~---------~----~~~~~~~~i------~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~ 220 (306)
T PLN02725 160 LYGPHDNFHP---------E----NSHVIPALI------RRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMR 220 (306)
T ss_pred eeCCCCCCCC---------C----CCcccHHHH------HHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHh
Confidence 9998632100 0 000000000 011122234443333 7788999999999999999998875
Q ss_pred hccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 491 NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
.. ...+.||++++ .++++.|+++.+.+.++.
T Consensus 221 ~~-------------------------~~~~~~ni~~~--~~~s~~e~~~~i~~~~~~ 251 (306)
T PLN02725 221 RY-------------------------SGAEHVNVGSG--DEVTIKELAELVKEVVGF 251 (306)
T ss_pred cc-------------------------ccCcceEeCCC--CcccHHHHHHHHHHHhCC
Confidence 42 12467899988 899999999999998764
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.7e-19 Score=194.62 Aligned_cols=263 Identities=18% Similarity=0.207 Sum_probs=169.7
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
...+|.|+|||.+|+.|..+ .+.|.. .+.+|.++.|.... .+.+.++.. +.
T Consensus 50 ~~~~k~VLVTGatGfIG~~l----v~~L~~---------------~G~~V~~~~r~~~~---~~~l~~l~~---~~---- 100 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAI----VDRLLR---------------HGYSVRIAVDTQED---KEKLREMEM---FG---- 100 (367)
T ss_pred CCCCCEEEEECCchHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH---HHHHHHHhh---hc----
Confidence 35678999999544444433 223321 25678777775321 112222110 00
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchh---hHHHHHHhhHHHHHHHHHHHHHccCCce
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDA---HLKVAVSINLRATKALLEMAKEMKQLKS 327 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~Lle~a~~~~~~~~ 327 (782)
+......++.++.+|++++ +++.++++++|.|||+|+.++... ......++|+.||.+++++|++..++++
T Consensus 101 ~~~~~~~~~~~v~~Dl~d~------~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r 174 (367)
T PLN02686 101 EMGRSNDGIWTVMANLTEP------ESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRK 174 (367)
T ss_pred cccccCCceEEEEcCCCCH------HHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccE
Confidence 0000013578899999998 788899999999999999764322 1235667899999999999998657999
Q ss_pred EEEEecc--eeccCC------CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 328 FVHVSTA--YSNCRQ------PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 328 fV~vST~--~v~~~~------~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
|||+||. .+|+.. ..+.|+...+ . ..+....+.|+.||..+|.++..+
T Consensus 175 ~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~---~--------------------~~~~~p~~~Y~~sK~~~E~~~~~~~ 231 (367)
T PLN02686 175 CVFTSSLLACVWRQNYPHDLPPVIDEESWSD---E--------------------SFCRDNKLWYALGKLKAEKAAWRAA 231 (367)
T ss_pred EEEeccHHHhcccccCCCCCCcccCCCCCCC---h--------------------hhcccccchHHHHHHHHHHHHHHHH
Confidence 9999996 456531 1233331100 0 001112267999999999999876
Q ss_pred -CCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccc
Q psy16243 399 -GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVP 477 (782)
Q Consensus 399 -~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~Vp 477 (782)
..|++++++||++||||...+.. +..+ ..+..|.. .+.+++ ..++++
T Consensus 232 ~~~gl~~v~lRp~~vyGp~~~~~~----------------------------~~~~-~~~~~g~~-~~~g~g--~~~~v~ 279 (367)
T PLN02686 232 RGKGLKLATICPALVTGPGFFRRN----------------------------STAT-IAYLKGAQ-EMLADG--LLATAD 279 (367)
T ss_pred HhcCceEEEEcCCceECCCCCCCC----------------------------ChhH-HHHhcCCC-ccCCCC--CcCeEE
Confidence 35899999999999998532100 0011 12334432 234444 357999
Q ss_pred hhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 478 ADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 478 VDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
|+|+|++++.++.... ....+++| ++++ .++++.|+++.+.+.++.
T Consensus 280 V~Dva~A~~~al~~~~----------------------~~~~~~~y-i~~g--~~~s~~e~~~~i~~~~g~ 325 (367)
T PLN02686 280 VERLAEAHVCVYEAMG----------------------NKTAFGRY-ICFD--HVVSREDEAEELARQIGL 325 (367)
T ss_pred HHHHHHHHHHHHhccC----------------------CCCCCCcE-EEeC--CCccHHHHHHHHHHHcCC
Confidence 9999999999886420 01235678 7787 889999999999999874
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.3e-18 Score=187.58 Aligned_cols=201 Identities=20% Similarity=0.178 Sum_probs=147.0
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc-hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEeccee
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF-DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYS 336 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v 336 (782)
+++++.+|++++ +++.++++++|+|||+|+.... .......+++|+.|+.+++++|++. +++++|++||.++
T Consensus 44 ~~~~~~~D~~~~------~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~ 116 (328)
T TIGR03466 44 DVEIVEGDLRDP------ASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVAT 116 (328)
T ss_pred CceEEEeeCCCH------HHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhh
Confidence 688899999987 7888999999999999987542 3456678899999999999999986 7899999999999
Q ss_pred ccCC---CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEecCCe
Q psy16243 337 NCRQ---PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRPSI 411 (782)
Q Consensus 337 ~~~~---~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvRp~~ 411 (782)
++.. .+++|+.. ..+....+.|+.+|.++|+++..+. .+++++++||+.
T Consensus 117 ~~~~~~~~~~~e~~~--------------------------~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~ 170 (328)
T TIGR03466 117 LGVRGDGTPADETTP--------------------------SSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPST 170 (328)
T ss_pred cCcCCCCCCcCccCC--------------------------CCcccccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 8742 13444311 1111112679999999999998873 489999999999
Q ss_pred EEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhh
Q psy16243 412 VIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWN 491 (782)
Q Consensus 412 v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~ 491 (782)
+||+...... ....++..+..+..+... +...+++|++|++++++.++..
T Consensus 171 ~~G~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~ 220 (328)
T TIGR03466 171 PIGPRDIKPT---------------------------PTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALER 220 (328)
T ss_pred cCCCCCCCCC---------------------------cHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHhC
Confidence 9997532100 001233333333322222 2346899999999999888754
Q ss_pred ccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 492 VHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
. ..+.+|+++ + .++++.|+++.+.+.++..
T Consensus 221 ~-------------------------~~~~~~~~~-~--~~~s~~e~~~~i~~~~g~~ 250 (328)
T TIGR03466 221 G-------------------------RIGERYILG-G--ENLTLKQILDKLAEITGRP 250 (328)
T ss_pred C-------------------------CCCceEEec-C--CCcCHHHHHHHHHHHhCCC
Confidence 2 235678875 5 6899999999999988754
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.2e-19 Score=192.19 Aligned_cols=184 Identities=16% Similarity=0.207 Sum_probs=138.5
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc---hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF---DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.++.++.+|++++ +++.++++++|+|||+||.... ..+..+.+++|+.|+.+++++|.+. ++++||++||
T Consensus 53 ~~~~~v~~Dl~d~------~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS 125 (324)
T TIGR03589 53 PCLRFFIGDVRDK------ERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALST 125 (324)
T ss_pred CcEEEEEccCCCH------HHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeC
Confidence 3688999999998 8888899999999999997532 2234578899999999999999986 7889999999
Q ss_pred ceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCCCcEEEec
Q psy16243 334 AYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVR 408 (782)
Q Consensus 334 ~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvR 408 (782)
.... .| .+.|+.||..+|.++..+ ..|++++++|
T Consensus 126 ~~~~-----------------------------------~p------~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR 164 (324)
T TIGR03589 126 DKAA-----------------------------------NP------INLYGATKLASDKLFVAANNISGSKGTRFSVVR 164 (324)
T ss_pred CCCC-----------------------------------CC------CCHHHHHHHHHHHHHHHHHhhccccCcEEEEEe
Confidence 5311 00 167999999999998763 3589999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
|++|+||.....+ .+...+..|..+...++++..+||++|+|++++++.+
T Consensus 165 ~g~v~G~~~~~i~------------------------------~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~a 214 (324)
T TIGR03589 165 YGNVVGSRGSVVP------------------------------FFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKS 214 (324)
T ss_pred ecceeCCCCCcHH------------------------------HHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHH
Confidence 9999997421111 2333333443122234678889999999999999998
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcc
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAV 546 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~ 546 (782)
+... ..+.+|+ +++ ..+++.|+++.+.+..
T Consensus 215 l~~~-------------------------~~~~~~~-~~~--~~~sv~el~~~i~~~~ 244 (324)
T TIGR03589 215 LERM-------------------------LGGEIFV-PKI--PSMKITDLAEAMAPEC 244 (324)
T ss_pred HhhC-------------------------CCCCEEc-cCC--CcEEHHHHHHHHHhhC
Confidence 8642 2346774 555 5689999999998754
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.9e-19 Score=188.32 Aligned_cols=192 Identities=20% Similarity=0.178 Sum_probs=140.6
Q ss_pred cCCCCCCCCCCHHhHHHHhcCc--eEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceecc
Q psy16243 264 GDCLKPGVGINSEDRQTLVDNI--HVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNC 338 (782)
Q Consensus 264 gDi~~~~lGl~~~~~~~l~~~v--diViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~ 338 (782)
+|+.++ +++..+++++ |+|||+|+..... ......+++|+.|+.+++++|++. +. +|||+||.++|+
T Consensus 34 ~d~~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~ 105 (287)
T TIGR01214 34 LDLTDP------EALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDYVFD 105 (287)
T ss_pred cCCCCH------HHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeeec
Confidence 466555 6777777765 9999999976543 234567899999999999999987 43 899999999997
Q ss_pred CCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEecc
Q psy16243 339 RQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 339 ~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~ 416 (782)
... ++.|+..+ ...+.|+.+|..+|+++..+ +.+++|+||+++||+.
T Consensus 106 ~~~~~~~~E~~~~-----------------------------~~~~~Y~~~K~~~E~~~~~~--~~~~~ilR~~~v~G~~ 154 (287)
T TIGR01214 106 GEGKRPYREDDAT-----------------------------NPLNVYGQSKLAGEQAIRAA--GPNALIVRTSWLYGGG 154 (287)
T ss_pred CCCCCCCCCCCCC-----------------------------CCcchhhHHHHHHHHHHHHh--CCCeEEEEeeecccCC
Confidence 532 34443211 11278999999999999877 6799999999999975
Q ss_pred CCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccc
Q psy16243 417 KEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTW 496 (782)
Q Consensus 417 ~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 496 (782)
... . ....++..+..+......+ +...++++++|+|+++..++...
T Consensus 155 ~~~----------------------~------~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~---- 200 (287)
T TIGR01214 155 GGR----------------------N------FVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRL---- 200 (287)
T ss_pred CCC----------------------C------HHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhc----
Confidence 210 0 0112333334443322333 46789999999999999988542
Q ss_pred hhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 497 NEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
...+++||++++ +++++.|+++.+.+.++...
T Consensus 201 --------------------~~~~~~~ni~~~--~~~s~~e~~~~i~~~~~~~~ 232 (287)
T TIGR01214 201 --------------------ARARGVYHLANS--GQCSWYEFAQAIFEEAGADG 232 (287)
T ss_pred --------------------cCCCCeEEEECC--CCcCHHHHHHHHHHHhCccc
Confidence 134689999998 89999999999999987653
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.1e-18 Score=185.35 Aligned_cols=255 Identities=18% Similarity=0.114 Sum_probs=168.4
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCchh---hHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFDA---HLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
+++.+.+|++++ +++..+++ ++|+|+|+|+...... ...+.+..|+.|+.+++++|.+. +++++|++|
T Consensus 48 ~~~~~~~D~~~~------~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~s 120 (328)
T TIGR01179 48 RVTFVEGDLRDR------ELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSS 120 (328)
T ss_pred ceEEEECCCCCH------HHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEec
Confidence 577889999987 77877776 5899999999754332 33467789999999999999987 688999999
Q ss_pred cceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--C-CCCcEEEe
Q psy16243 333 TAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--G-AGMPVAMV 407 (782)
Q Consensus 333 T~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~-~glp~~Iv 407 (782)
|.++++... .+.|+. +. ...+.|+.+|..+|.++..+ . .+++++|+
T Consensus 121 s~~~~g~~~~~~~~e~~--------------------------~~---~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~il 171 (328)
T TIGR01179 121 SAAVYGEPSSIPISEDS--------------------------PL---GPINPYGRSKLMSERILRDLSKADPGLSYVIL 171 (328)
T ss_pred chhhcCCCCCCCccccC--------------------------CC---CCCCchHHHHHHHHHHHHHHHHhccCCCEEEE
Confidence 999887543 344431 10 12278999999999999876 2 68999999
Q ss_pred cCCeEEeccCCCCcccccccCCcccccccCCCccccccc-ccchhhHHHHhhcC--ceeee------ccCCCccccccch
Q psy16243 408 RPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINN-HYGPTGIVAGAGLG--LLRSM------HADPELVADMVPA 478 (782)
Q Consensus 408 Rp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~-~~~~~~~~~~~~~g--~~~~~------~~~~~~~~d~VpV 478 (782)
||+++||+...+.. ++... .......+.....| ..... .++++...+|||+
T Consensus 172 R~~~v~g~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~ 231 (328)
T TIGR01179 172 RYFNVAGADPEGTI--------------------GEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHV 231 (328)
T ss_pred ecCcccCCCCCCcc--------------------ccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeH
Confidence 99999998654332 11100 00000111111221 11111 1356778999999
Q ss_pred hHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCcceece
Q psy16243 479 DNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAY 558 (782)
Q Consensus 479 Ddva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~~~~~~ 558 (782)
+|+++++..++..... ...+++||++++ .++|+.|+++.+.+.++.... . ...+
T Consensus 232 ~D~a~~~~~~~~~~~~----------------------~~~~~~~n~~~~--~~~s~~ei~~~~~~~~g~~~~-~-~~~~ 285 (328)
T TIGR01179 232 MDLADAHLAALEYLLN----------------------GGESHVYNLGYG--QGFSVLEVIEAFKKVSGVDFP-V-ELAP 285 (328)
T ss_pred HHHHHHHHHHHhhhhc----------------------CCCcceEEcCCC--CcccHHHHHHHHHHHhCCCcc-e-EeCC
Confidence 9999999988864311 134689999998 889999999999999875321 1 0111
Q ss_pred eeEeccchHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHH
Q psy16243 559 CFTLNKYKSIHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKF 607 (782)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~ 607 (782)
.. ..... . ......++...+||+|+...+-+-+.+.
T Consensus 286 ~~---~~~~~--------~--~~~~~~~~~~~lg~~p~~~~l~~~~~~~ 321 (328)
T TIGR01179 286 RR---PGDPA--------S--LVADASKIRRELGWQPKYTDLEIIIKTA 321 (328)
T ss_pred CC---Ccccc--------c--hhcchHHHHHHhCCCCCcchHHHHHHHH
Confidence 10 00000 0 0123567778889999854344444443
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.1e-19 Score=183.32 Aligned_cols=219 Identities=21% Similarity=0.188 Sum_probs=147.9
Q ss_pred ccceeeeeecccchhhHHHHHHHhhcccccccccccCcccccceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCc
Q psy16243 216 AHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAA 293 (782)
Q Consensus 216 ~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa 293 (782)
++.+++++.|.... +..++.-+... +. .+.....+.++.||+++. +.+..+++ ++|+|||+||
T Consensus 22 ~p~~lil~d~~E~~---l~~l~~~l~~~-~~-----~~~v~~~~~~vigDvrd~------~~l~~~~~~~~pdiVfHaAA 86 (293)
T PF02719_consen 22 GPKKLILFDRDENK---LYELERELRSR-FP-----DPKVRFEIVPVIGDVRDK------ERLNRIFEEYKPDIVFHAAA 86 (293)
T ss_dssp B-SEEEEEES-HHH---HHHHHHHCHHH-C-------TTCEEEEE--CTSCCHH------HHHHHHTT--T-SEEEE---
T ss_pred CCCeEEEeCCChhH---HHHHHHHHhhc-cc-----ccCcccccCceeecccCH------HHHHHHHhhcCCCEEEEChh
Confidence 46889999987543 23332221100 00 011122456789999998 88999999 7899999999
Q ss_pred ccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhh
Q psy16243 294 TVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMID 370 (782)
Q Consensus 294 ~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~ 370 (782)
.-+.. ..+.+++++|+.||++++++|.++ ++++||++||.-+..
T Consensus 87 ~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv~-------------------------------- 133 (293)
T PF02719_consen 87 LKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAVN-------------------------------- 133 (293)
T ss_dssp ---HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCSS--------------------------------
T ss_pred cCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccCC--------------------------------
Confidence 85432 457789999999999999999998 899999999973321
Q ss_pred hhcCCccCCCCccHHHHHHHHHHHHHHcCC-----CCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccc
Q psy16243 371 KITPGIVDYWPNTYALTKQVAEDMVRRGGA-----GMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWIN 445 (782)
Q Consensus 371 ~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~-----glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~ 445 (782)
+.|.||.||.+||.++..+.. +..++++|.|+|.|+..+-+|
T Consensus 134 ---------PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip------------------------ 180 (293)
T PF02719_consen 134 ---------PTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIP------------------------ 180 (293)
T ss_dssp -----------SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHH------------------------
T ss_pred ---------CCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHH------------------------
Confidence 119999999999999999843 468999999999998655444
Q ss_pred cccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEe
Q psy16243 446 NHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNY 525 (782)
Q Consensus 446 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni 525 (782)
.+...+..|.+. ..-+++..+=|+-+++++..++.++... ..+++|-.
T Consensus 181 ------~F~~Qi~~g~Pl-TvT~p~mtRffmti~EAv~Lvl~a~~~~-------------------------~~geifvl 228 (293)
T PF02719_consen 181 ------LFKKQIKNGGPL-TVTDPDMTRFFMTIEEAVQLVLQAAALA-------------------------KGGEIFVL 228 (293)
T ss_dssp ------HHHHHHHTTSSE-EECETT-EEEEE-HHHHHHHHHHHHHH---------------------------TTEEEEE
T ss_pred ------HHHHHHHcCCcc-eeCCCCcEEEEecHHHHHHHHHHHHhhC-------------------------CCCcEEEe
Confidence 345556666443 3346888999999999999999988653 45789999
Q ss_pred ecCCCCcccHHHHHHHHHhccccc
Q psy16243 526 VSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 526 ~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
-.+ .|+++.|+++.+.+..|..
T Consensus 229 ~mg--~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 229 DMG--EPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp -----TCEECCCHHHHHHHHTT-E
T ss_pred cCC--CCcCHHHHHHHHHhhcccc
Confidence 888 8999999999999887743
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.4e-18 Score=184.16 Aligned_cols=254 Identities=15% Similarity=0.135 Sum_probs=165.7
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+|+|||.+|+.|..+ .+.|+. .+.+|.++.|........+.+..+.
T Consensus 6 ~k~vlVTGatG~IG~~l----v~~Ll~---------------~G~~V~~~~R~~~~~~~~~~~~~l~------------- 53 (297)
T PLN02583 6 SKSVCVMDASGYVGFWL----VKRLLS---------------RGYTVHAAVQKNGETEIEKEIRGLS------------- 53 (297)
T ss_pred CCEEEEECCCCHHHHHH----HHHHHh---------------CCCEEEEEEcCchhhhHHHHHHhcc-------------
Confidence 57899999444444333 233322 2678888888533222222222110
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc-hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF-DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
....++.++.+|++++ +++..++.++|.|+|+++.... ....++.+++|+.||.+++++|.+..+++++|++|
T Consensus 54 ~~~~~~~~~~~Dl~d~------~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~S 127 (297)
T PLN02583 54 CEEERLKVFDVDPLDY------HSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTS 127 (297)
T ss_pred cCCCceEEEEecCCCH------HHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Confidence 0013688899999998 7888899999999998865432 22346789999999999999998865689999999
Q ss_pred cceecc--CCC-----cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCc
Q psy16243 333 TAYSNC--RQP-----IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMP 403 (782)
Q Consensus 333 T~~v~~--~~~-----~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp 403 (782)
|..++. ... +++|+...+ +. ........|+.||.++|+++..+ ..+++
T Consensus 128 S~~a~~~~~~~~~~~~~~~E~~~~~---~~--------------------~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~ 184 (297)
T PLN02583 128 SLTAVIWRDDNISTQKDVDERSWSD---QN--------------------FCRKFKLWHALAKTLSEKTAWALAMDRGVN 184 (297)
T ss_pred chHheecccccCCCCCCCCcccCCC---HH--------------------HHhhcccHHHHHHHHHHHHHHHHHHHhCCc
Confidence 986542 111 233321100 00 00011136999999999999876 35899
Q ss_pred EEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHH
Q psy16243 404 VAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVIN 483 (782)
Q Consensus 404 ~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~ 483 (782)
++++||+.|+||...+.. . ...+... .. +.....+|+|+|||+
T Consensus 185 ~v~lrp~~v~Gp~~~~~~------------------------------~----~~~~~~~-~~--~~~~~~~v~V~Dva~ 227 (297)
T PLN02583 185 MVSINAGLLMGPSLTQHN------------------------------P----YLKGAAQ-MY--ENGVLVTVDVNFLVD 227 (297)
T ss_pred EEEEcCCcccCCCCCCch------------------------------h----hhcCCcc-cC--cccCcceEEHHHHHH
Confidence 999999999997543210 0 0111111 11 123457999999999
Q ss_pred HHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCC
Q psy16243 484 CIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPST 552 (782)
Q Consensus 484 aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~ 552 (782)
+++.++... ...+.|+++++ +...+.++.+.+.+.++..|.+
T Consensus 228 a~~~al~~~-------------------------~~~~r~~~~~~--~~~~~~~~~~~~~~~~p~~~~~ 269 (297)
T PLN02583 228 AHIRAFEDV-------------------------SSYGRYLCFNH--IVNTEEDAVKLAQMLSPLIPSP 269 (297)
T ss_pred HHHHHhcCc-------------------------ccCCcEEEecC--CCccHHHHHHHHHHhCCCCCCC
Confidence 999999743 23347888886 5566789999999988877654
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.3e-17 Score=178.18 Aligned_cols=181 Identities=15% Similarity=0.125 Sum_probs=135.8
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceec
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSN 337 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~ 337 (782)
+++++.||++++ +++..+++++|+|||+++... .....+.++|+.|+.+++++|++. ++++|||+||..+.
T Consensus 44 ~v~~v~~Dl~d~------~~l~~al~g~d~Vi~~~~~~~--~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~ 114 (317)
T CHL00194 44 GAELVYGDLSLP------ETLPPSFKGVTAIIDASTSRP--SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAE 114 (317)
T ss_pred CCEEEECCCCCH------HHHHHHHCCCCEEEECCCCCC--CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEecccccc
Confidence 688999999998 889999999999999986432 233456788999999999999997 89999999996432
Q ss_pred cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEeccC
Q psy16243 338 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNK 417 (782)
Q Consensus 338 ~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~~ 417 (782)
.. + ...|..+|..+|+++... +++++|+||+.+++..-
T Consensus 115 ~~---------~-------------------------------~~~~~~~K~~~e~~l~~~--~l~~tilRp~~~~~~~~ 152 (317)
T CHL00194 115 QY---------P-------------------------------YIPLMKLKSDIEQKLKKS--GIPYTIFRLAGFFQGLI 152 (317)
T ss_pred cc---------C-------------------------------CChHHHHHHHHHHHHHHc--CCCeEEEeecHHhhhhh
Confidence 11 0 146889999999998754 89999999997764210
Q ss_pred CCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccch
Q psy16243 418 EPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWN 497 (782)
Q Consensus 418 ~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 497 (782)
. . ....+..+.. .....++..+++|+++|+|+++..++...
T Consensus 153 ---~--------------------~----------~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~~~----- 193 (317)
T CHL00194 153 ---S--------------------Q----------YAIPILEKQP-IWITNESTPISYIDTQDAAKFCLKSLSLP----- 193 (317)
T ss_pred ---h--------------------h----------hhhhhccCCc-eEecCCCCccCccCHHHHHHHHHHHhcCc-----
Confidence 0 0 0000111222 22234566789999999999999887542
Q ss_pred hhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 498 EKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
...+++||++++ +++|++|+++.+.+..++.
T Consensus 194 -------------------~~~~~~~ni~g~--~~~s~~el~~~~~~~~g~~ 224 (317)
T CHL00194 194 -------------------ETKNKTFPLVGP--KSWNSSEIISLCEQLSGQK 224 (317)
T ss_pred -------------------cccCcEEEecCC--CccCHHHHHHHHHHHhCCC
Confidence 235789999999 8999999999999988864
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.1e-17 Score=181.00 Aligned_cols=180 Identities=16% Similarity=0.117 Sum_probs=132.9
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHh--cCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecce
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLV--DNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAY 335 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~--~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~ 335 (782)
.++++.||+.+ +..++ .++|+|||+++. +..++++++++|++. ++++|||+||++
T Consensus 111 ~v~~v~~D~~d---------~~~~~~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~ 167 (378)
T PLN00016 111 GVKTVWGDPAD---------VKSKVAGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFCSSAG 167 (378)
T ss_pred CceEEEecHHH---------HHhhhccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEEccHh
Confidence 58899999865 22333 468999999763 245789999999987 899999999999
Q ss_pred eccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEE
Q psy16243 336 SNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVI 413 (782)
Q Consensus 336 v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~ 413 (782)
+|+... +..|.. + .+.+. +|..+|.++... +++++|+||+.+|
T Consensus 168 vyg~~~~~p~~E~~--------------------------~------~~p~~-sK~~~E~~l~~~--~l~~~ilRp~~vy 212 (378)
T PLN00016 168 VYKKSDEPPHVEGD--------------------------A------VKPKA-GHLEVEAYLQKL--GVNWTSFRPQYIY 212 (378)
T ss_pred hcCCCCCCCCCCCC--------------------------c------CCCcc-hHHHHHHHHHHc--CCCeEEEeceeEE
Confidence 998642 222210 0 01122 899999998754 8999999999999
Q ss_pred eccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhcc
Q psy16243 414 ATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVH 493 (782)
Q Consensus 414 G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 493 (782)
||...... ...++..+..|....+++++...++++|++|++++++.++...
T Consensus 213 G~~~~~~~----------------------------~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~- 263 (378)
T PLN00016 213 GPGNNKDC----------------------------EEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNP- 263 (378)
T ss_pred CCCCCCch----------------------------HHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCc-
Confidence 97532100 0013334455655567788899999999999999999988642
Q ss_pred ccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 494 QTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
...+++||++++ +++|+.|+++.+.+..+..
T Consensus 264 -----------------------~~~~~~yni~~~--~~~s~~el~~~i~~~~g~~ 294 (378)
T PLN00016 264 -----------------------KAAGQIFNIVSD--RAVTFDGMAKACAKAAGFP 294 (378)
T ss_pred -----------------------cccCCEEEecCC--CccCHHHHHHHHHHHhCCC
Confidence 134689999998 8899999999999988764
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.4e-17 Score=181.03 Aligned_cols=237 Identities=18% Similarity=0.136 Sum_probs=167.2
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.++.|+|||.+|+.|..+ .+.|.. .+.+|+++.|...+........+..
T Consensus 59 ~~~kVLVtGatG~IG~~l----~~~Ll~---------------~G~~V~~l~R~~~~~~~~~~~~~~~------------ 107 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFV----VRELVR---------------RGYNVVAVAREKSGIRGKNGKEDTK------------ 107 (390)
T ss_pred CCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEEechhhccccchhhHHh------------
Confidence 467899999544444433 233322 2568899998753211100011110
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc----CceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceE
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD----NIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSF 328 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~----~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~f 328 (782)
....+++++.+|++++ +++..+++ ++|+||||++.... ...+.+++|+.++.+++++|++. ++++|
T Consensus 108 -~~~~~v~~v~~Dl~d~------~~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~ 177 (390)
T PLN02657 108 -KELPGAEVVFGDVTDA------DSLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHF 177 (390)
T ss_pred -hhcCCceEEEeeCCCH------HHHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEE
Confidence 0123688999999998 78888887 58999999985321 12345678999999999999987 78999
Q ss_pred EEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEec
Q psy16243 329 VHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVR 408 (782)
Q Consensus 329 V~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvR 408 (782)
|++||.++++. .+.|+.+|..+|+.+.....+++++|+|
T Consensus 178 V~iSS~~v~~p-----------------------------------------~~~~~~sK~~~E~~l~~~~~gl~~tIlR 216 (390)
T PLN02657 178 VLLSAICVQKP-----------------------------------------LLEFQRAKLKFEAELQALDSDFTYSIVR 216 (390)
T ss_pred EEEeeccccCc-----------------------------------------chHHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 99999876421 0468899999999987645689999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccc-cccchhHHHHHHHH
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVA-DMVPADNVINCIIS 487 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-d~VpVDdva~aii~ 487 (782)
|+.+||+. . +.+..+..|....+.|+++..+ .+|+++|+|.++..
T Consensus 217 p~~~~~~~----~------------------------------~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~ 262 (390)
T PLN02657 217 PTAFFKSL----G------------------------------GQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIAD 262 (390)
T ss_pred cHHHhccc----H------------------------------HHHHhhccCCceEEecCCcccccCceeHHHHHHHHHH
Confidence 99998631 1 1233344565556678887654 67999999999988
Q ss_pred hhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 488 AAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 488 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
++... ...+++||++++. +.+|++|+++.+.+.+++.+
T Consensus 263 ~~~~~------------------------~~~~~~~~Iggp~-~~~S~~Eia~~l~~~lG~~~ 300 (390)
T PLN02657 263 CVLDE------------------------SKINKVLPIGGPG-KALTPLEQGEMLFRILGKEP 300 (390)
T ss_pred HHhCc------------------------cccCCEEEcCCCC-cccCHHHHHHHHHHHhCCCC
Confidence 87542 2346899998751 58999999999999988643
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.3e-16 Score=163.65 Aligned_cols=187 Identities=20% Similarity=0.242 Sum_probs=141.7
Q ss_pred cCCCCCCCCCCHHhHHHHhcCc--eEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceecc
Q psy16243 264 GDCLKPGVGINSEDRQTLVDNI--HVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNC 338 (782)
Q Consensus 264 gDi~~~~lGl~~~~~~~l~~~v--diViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~ 338 (782)
.||+++ +.+.+++++. |+|||+||.++.+ ...+.++.+|..|+.+++++|++.+ ..+||+||.||+.
T Consensus 34 ~Ditd~------~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFD 105 (281)
T COG1091 34 LDITDP------DAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFD 105 (281)
T ss_pred ccccCh------HHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEec
Confidence 577777 6777887754 9999999998776 2356799999999999999999873 6899999999985
Q ss_pred C-C-CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEecc
Q psy16243 339 R-Q-PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 339 ~-~-~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~ 416 (782)
. . .+-.|+..+.|+ |.||.||+++|..+..+. -...|+|.+++||..
T Consensus 106 G~~~~~Y~E~D~~~P~-----------------------------nvYG~sKl~GE~~v~~~~--~~~~I~Rtswv~g~~ 154 (281)
T COG1091 106 GEKGGPYKETDTPNPL-----------------------------NVYGRSKLAGEEAVRAAG--PRHLILRTSWVYGEY 154 (281)
T ss_pred CCCCCCCCCCCCCCCh-----------------------------hhhhHHHHHHHHHHHHhC--CCEEEEEeeeeecCC
Confidence 4 3 245555333222 899999999999999884 346899999999864
Q ss_pred CCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccc
Q psy16243 417 KEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTW 496 (782)
Q Consensus 417 ~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 496 (782)
...+. ..++.....|.. +....++....+++.|+|.++..++...
T Consensus 155 g~nFv-----------------------------~tml~la~~~~~--l~vv~Dq~gsPt~~~dlA~~i~~ll~~~---- 199 (281)
T COG1091 155 GNNFV-----------------------------KTMLRLAKEGKE--LKVVDDQYGSPTYTEDLADAILELLEKE---- 199 (281)
T ss_pred CCCHH-----------------------------HHHHHHhhcCCc--eEEECCeeeCCccHHHHHHHHHHHHhcc----
Confidence 22111 123344344432 2334578888999999999999988653
Q ss_pred hhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccc
Q psy16243 497 NEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVP 547 (782)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~ 547 (782)
...++||+++. ..+||-|+...+.+..+
T Consensus 200 ---------------------~~~~~yH~~~~--g~~Swydfa~~I~~~~~ 227 (281)
T COG1091 200 ---------------------KEGGVYHLVNS--GECSWYEFAKAIFEEAG 227 (281)
T ss_pred ---------------------ccCcEEEEeCC--CcccHHHHHHHHHHHhC
Confidence 23459999998 77999999999999876
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.6e-16 Score=181.93 Aligned_cols=118 Identities=25% Similarity=0.331 Sum_probs=86.7
Q ss_pred ccchhhHHHHHHHHHh-cCCCCeEEEeCCCccccc------ccccccccccccccCccc-----CCCeeEeeccccCCCC
Q psy16243 121 NTYALTKQVAEDMVRR-GGAGMPVAMVRPSIDLGI------LFYSEQFFDPMRKRCPHY-----LSKMVAVTGDCLKPGV 188 (782)
Q Consensus 121 nt~~l~k~L~E~Ll~~-~~~~~~~~ivRps~~~~~------~~~~~~~f~~l~~~~p~~-----~~k~vlvTG~~~~~g~ 188 (782)
.||++|++++|+|++. +....+++++|++...+. ++.+.++|+++++..+.. ..|+.++.||+..+++
T Consensus 19 aTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~~L 98 (491)
T PLN02996 19 ATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDL 98 (491)
T ss_pred CCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCcCC
Confidence 5799999999999986 456788999999876554 234455666665544432 3789999999999999
Q ss_pred CCChhh-HHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHH
Q psy16243 189 GINSED-RQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKE 238 (782)
Q Consensus 189 Gl~~~~-~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~ 238 (782)
|++..+ ++.+..++++|+|+||.+++........-++..++....+.+++
T Consensus 99 GLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~ 149 (491)
T PLN02996 99 GVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKK 149 (491)
T ss_pred CCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 998766 67888899999999999887654444444455555555554444
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-16 Score=171.15 Aligned_cols=188 Identities=22% Similarity=0.211 Sum_probs=125.4
Q ss_pred HhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceeccCC-C-ccccccc
Q psy16243 276 EDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQ-P-IIEERFY 348 (782)
Q Consensus 276 ~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~~~-~-~i~E~~~ 348 (782)
+.+.++++. .|+||||||..+.+ ...+.++.+|+.++.+|+++|.+. + .++||+||.+|+... . +..|+..
T Consensus 41 ~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~STd~VFdG~~~~~y~E~d~ 118 (286)
T PF04321_consen 41 EAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHISTDYVFDGDKGGPYTEDDP 118 (286)
T ss_dssp HHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS-SSTSSSB-TTS-
T ss_pred HHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEeeccEEEcCCcccccccCCC
Confidence 666666664 69999999987654 356689999999999999999986 3 599999999999654 2 4555532
Q ss_pred CCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEeccCCCCcccccccC
Q psy16243 349 EPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPGWINNHY 428 (782)
Q Consensus 349 ~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~~~p~~g~~~~~~ 428 (782)
+.| .|.||.||..+|+.+.+... ...|+|++.+||+.....
T Consensus 119 ~~P-----------------------------~~~YG~~K~~~E~~v~~~~~--~~~IlR~~~~~g~~~~~~-------- 159 (286)
T PF04321_consen 119 PNP-----------------------------LNVYGRSKLEGEQAVRAACP--NALILRTSWVYGPSGRNF-------- 159 (286)
T ss_dssp --------------------------------SSHHHHHHHHHHHHHHHH-S--SEEEEEE-SEESSSSSSH--------
T ss_pred CCC-----------------------------CCHHHHHHHHHHHHHHHhcC--CEEEEecceecccCCCch--------
Confidence 221 28999999999999998644 679999999999732211
Q ss_pred CcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhccccccc
Q psy16243 429 GPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVAD 508 (782)
Q Consensus 429 ~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~ 508 (782)
...++..+..|..... ..+.....++++|+|.++..++.+....
T Consensus 160 ---------------------~~~~~~~~~~~~~i~~--~~d~~~~p~~~~dlA~~i~~l~~~~~~~------------- 203 (286)
T PF04321_consen 160 ---------------------LRWLLRRLRQGEPIKL--FDDQYRSPTYVDDLARVILELIEKNLSG------------- 203 (286)
T ss_dssp ---------------------HHHHHHHHHCTSEEEE--ESSCEE--EEHHHHHHHHHHHHHHHHH--------------
T ss_pred ---------------------hhhHHHHHhcCCeeEe--eCCceeCCEEHHHHHHHHHHHHHhcccc-------------
Confidence 1124444455554433 3467889999999999999999765211
Q ss_pred ccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 509 SLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 509 ~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
....++||++++ +.+|+.|++..+.+.++..+
T Consensus 204 --------~~~~Giyh~~~~--~~~S~~e~~~~i~~~~~~~~ 235 (286)
T PF04321_consen 204 --------ASPWGIYHLSGP--ERVSRYEFAEAIAKILGLDP 235 (286)
T ss_dssp --------GGG-EEEE---B--S-EEHHHHHHHHHHHHTHCT
T ss_pred --------cccceeEEEecC--cccCHHHHHHHHHHHhCCCC
Confidence 124689999999 88999999999999887654
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.70 E-value=5e-16 Score=166.30 Aligned_cols=182 Identities=17% Similarity=0.166 Sum_probs=126.6
Q ss_pred HHHhcCceEEEEcCcccCch-----hhHHHHHHhhHHHHHHHHHHHHHccCC--ceEEEEecceeccCCC--cccccccC
Q psy16243 279 QTLVDNIHVVFHCAATVRFD-----AHLKVAVSINLRATKALLEMAKEMKQL--KSFVHVSTAYSNCRQP--IIEERFYE 349 (782)
Q Consensus 279 ~~l~~~vdiViH~Aa~v~f~-----~~~~~~~~~Nv~gt~~Lle~a~~~~~~--~~fV~vST~~v~~~~~--~i~E~~~~ 349 (782)
.+.+.++|+|||+||..... ....+..++|+.||++++++|++. ++ ..||+.||.++|+... ++.|+..+
T Consensus 52 ~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~ 130 (292)
T TIGR01777 52 SEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYGTSEDRVFTEEDSP 130 (292)
T ss_pred hhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeCCCCCCCcCcccCC
Confidence 34567899999999975432 233467889999999999999987 44 4677778878887532 34444211
Q ss_pred CCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-CCCCcEEEecCCeEEeccCCCCcccccccC
Q psy16243 350 PPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-GAGMPVAMVRPSIVIATNKEPIPGWINNHY 428 (782)
Q Consensus 350 ~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-~~glp~~IvRp~~v~G~~~~p~~g~~~~~~ 428 (782)
. ..+.|+..+...|..+..+ ..+++++|+||+.+|||..
T Consensus 131 ~-----------------------------~~~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~----------- 170 (292)
T TIGR01777 131 A-----------------------------GDDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKG----------- 170 (292)
T ss_pred C-----------------------------CCChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCc-----------
Confidence 0 0134566677777777655 3489999999999999742
Q ss_pred CcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhccccccc
Q psy16243 429 GPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVAD 508 (782)
Q Consensus 429 ~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~ 508 (782)
++.. .+......+ .....++++..+++|+|+|+++++..++...
T Consensus 171 -------------~~~~------~~~~~~~~~-~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~---------------- 214 (292)
T TIGR01777 171 -------------GALA------KMLPPFRLG-LGGPLGSGRQWFSWIHIEDLVQLILFALENA---------------- 214 (292)
T ss_pred -------------chhH------HHHHHHhcC-cccccCCCCcccccEeHHHHHHHHHHHhcCc----------------
Confidence 1111 111111111 0112467889999999999999999888542
Q ss_pred ccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 509 SLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 509 ~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
...++||++++ .++|+.|+++.+.+..+.
T Consensus 215 ---------~~~g~~~~~~~--~~~s~~di~~~i~~~~g~ 243 (292)
T TIGR01777 215 ---------SISGPVNATAP--EPVRNKEFAKALARALHR 243 (292)
T ss_pred ---------ccCCceEecCC--CccCHHHHHHHHHHHhCC
Confidence 23468999998 899999999999998875
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-15 Score=162.98 Aligned_cols=169 Identities=16% Similarity=0.171 Sum_probs=118.2
Q ss_pred CceEEEEcCcccCc------hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceeccCCC--------cccccccC
Q psy16243 284 NIHVVFHCAATVRF------DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQP--------IIEERFYE 349 (782)
Q Consensus 284 ~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~~~~--------~i~E~~~~ 349 (782)
++|+|||+||.... .....+++++|+.||.+|+++|++. +++ ++++||.++|+... .+.|+..
T Consensus 57 ~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~- 133 (298)
T PLN02778 57 KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDT- 133 (298)
T ss_pred CCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EEEEecceEeCCCCCCCcccCCCCCcCCC-
Confidence 57999999998642 2345678999999999999999997 675 56677777775421 1222211
Q ss_pred CCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEeccCCCCcccccccCC
Q psy16243 350 PPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPGWINNHYG 429 (782)
Q Consensus 350 ~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~ 429 (782)
+.+..+.||.||.++|.++..+. ...++|+++.+|+...
T Consensus 134 ---------------------------p~~~~s~Yg~sK~~~E~~~~~y~---~~~~lr~~~~~~~~~~----------- 172 (298)
T PLN02778 134 ---------------------------PNFTGSFYSKTKAMVEELLKNYE---NVCTLRVRMPISSDLS----------- 172 (298)
T ss_pred ---------------------------CCCCCCchHHHHHHHHHHHHHhh---ccEEeeecccCCcccc-----------
Confidence 11122789999999999998874 3567888776653210
Q ss_pred cccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccc
Q psy16243 430 PTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADS 509 (782)
Q Consensus 430 P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~ 509 (782)
.+..++..+..+......+ .++++++|++++++.++...
T Consensus 173 -------------------~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~----------------- 211 (298)
T PLN02778 173 -------------------NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRN----------------- 211 (298)
T ss_pred -------------------cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCC-----------------
Confidence 0113445555553322221 37999999999999887431
Q ss_pred cCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 510 LDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 510 ~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
..++||++++ .++|+.|+++.+.+.++.
T Consensus 212 ---------~~g~yNigs~--~~iS~~el~~~i~~~~~~ 239 (298)
T PLN02778 212 ---------LTGIYNFTNP--GVVSHNEILEMYRDYIDP 239 (298)
T ss_pred ---------CCCeEEeCCC--CcccHHHHHHHHHHHhCC
Confidence 2369999998 899999999999998874
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.9e-15 Score=178.13 Aligned_cols=161 Identities=18% Similarity=0.213 Sum_probs=124.0
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceec
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSN 337 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~ 337 (782)
++.++.+|++++ +++..+++++|+|||+||.... ..++|+.||.+++++|++. ++++|||+||.
T Consensus 41 ~v~~v~gDL~D~------~~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~--- 104 (854)
T PRK05865 41 SADFIAADIRDA------TAVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTSSG--- 104 (854)
T ss_pred CceEEEeeCCCH------HHHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCc---
Confidence 577899999987 7888889999999999986432 4678999999999999987 78999999873
Q ss_pred cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEeccC
Q psy16243 338 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNK 417 (782)
Q Consensus 338 ~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~~ 417 (782)
. |..+|+++.++ +++++|+||+++|||..
T Consensus 105 --------------------------------------------~-----K~aaE~ll~~~--gl~~vILRp~~VYGP~~ 133 (854)
T PRK05865 105 --------------------------------------------H-----QPRVEQMLADC--GLEWVAVRCALIFGRNV 133 (854)
T ss_pred --------------------------------------------H-----HHHHHHHHHHc--CCCEEEEEeceEeCCCh
Confidence 1 77888888654 89999999999999731
Q ss_pred CCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccch
Q psy16243 418 EPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWN 497 (782)
Q Consensus 418 ~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 497 (782)
+ .| +..+. .......|+++..+|||||+|++++++.++...
T Consensus 134 ---~--------------------~~----------i~~ll-~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~----- 174 (854)
T PRK05865 134 ---D--------------------NW----------VQRLF-ALPVLPAGYADRVVQVVHSDDAQRLLVRALLDT----- 174 (854)
T ss_pred ---H--------------------HH----------HHHHh-cCceeccCCCCceEeeeeHHHHHHHHHHHHhCC-----
Confidence 1 11 11111 111122345566789999999999999887532
Q ss_pred hhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhc
Q psy16243 498 EKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKA 545 (782)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~ 545 (782)
...+++||++++ +++|+.|+++.+.+.
T Consensus 175 -------------------~~~ggvyNIgsg--~~~Si~EIae~l~~~ 201 (854)
T PRK05865 175 -------------------VIDSGPVNLAAP--GELTFRRIAAALGRP 201 (854)
T ss_pred -------------------CcCCCeEEEECC--CcccHHHHHHHHhhh
Confidence 123579999999 889999999988763
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.5e-12 Score=152.02 Aligned_cols=162 Identities=15% Similarity=0.122 Sum_probs=112.9
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceec
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSN 337 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~ 337 (782)
+++++.+|++++ .+.++++++|+|||+|+.... . ...+|+.|+.+++++|++. ++ ++||+||.+
T Consensus 41 ~ve~v~~Dl~d~-------~l~~al~~~D~VIHLAa~~~~-~----~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~-- 104 (699)
T PRK12320 41 RVDYVCASLRNP-------VLQELAGEADAVIHLAPVDTS-A----PGGVGITGLAHVANAAARA-GA-RLLFVSQAA-- 104 (699)
T ss_pred CceEEEccCCCH-------HHHHHhcCCCEEEEcCccCcc-c----hhhHHHHHHHHHHHHHHHc-CC-eEEEEECCC--
Confidence 578899999886 256777889999999986421 1 2258999999999999987 55 799999874
Q ss_pred cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEeccC
Q psy16243 338 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNK 417 (782)
Q Consensus 338 ~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~~ 417 (782)
|.+ ..|. .+|.++..+ +++++|+|++++|||..
T Consensus 105 G~~-----------------------------------------~~~~----~aE~ll~~~--~~p~~ILR~~nVYGp~~ 137 (699)
T PRK12320 105 GRP-----------------------------------------ELYR----QAETLVSTG--WAPSLVIRIAPPVGRQL 137 (699)
T ss_pred CCC-----------------------------------------cccc----HHHHHHHhc--CCCEEEEeCceecCCCC
Confidence 321 1122 367776553 58999999999999743
Q ss_pred CCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccch
Q psy16243 418 EPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWN 497 (782)
Q Consensus 418 ~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 497 (782)
.+.. ..++..+..... ......+|||||++++++.++...
T Consensus 138 ~~~~-----------------------------~r~I~~~l~~~~------~~~pI~vIyVdDvv~alv~al~~~----- 177 (699)
T PRK12320 138 DWMV-----------------------------CRTVATLLRSKV------SARPIRVLHLDDLVRFLVLALNTD----- 177 (699)
T ss_pred cccH-----------------------------hHHHHHHHHHHH------cCCceEEEEHHHHHHHHHHHHhCC-----
Confidence 2210 012222211110 012233589999999998887531
Q ss_pred hhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhc
Q psy16243 498 EKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKA 545 (782)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~ 545 (782)
..++||++++ +.+|+.|+++.+...
T Consensus 178 ---------------------~~GiyNIG~~--~~~Si~el~~~i~~~ 202 (699)
T PRK12320 178 ---------------------RNGVVDLATP--DTTNVVTAWRLLRSV 202 (699)
T ss_pred ---------------------CCCEEEEeCC--CeeEHHHHHHHHHHh
Confidence 2349999999 889999999988765
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.8e-12 Score=155.09 Aligned_cols=176 Identities=16% Similarity=0.193 Sum_probs=118.9
Q ss_pred HhHHHHhc--CceEEEEcCcccC---ch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceeccCCC------
Q psy16243 276 EDRQTLVD--NIHVVFHCAATVR---FD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQP------ 341 (782)
Q Consensus 276 ~~~~~l~~--~vdiViH~Aa~v~---f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~~~~------ 341 (782)
+.+...++ ++|+||||||... .+ ....+++++|+.||.+|+++|++. +++ ++|+||.+||+...
T Consensus 418 ~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~-~v~~Ss~~v~~~~~~~~~~~ 495 (668)
T PLN02260 418 SSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLL-MMNFATGCIFEYDAKHPEGS 495 (668)
T ss_pred HHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCe-EEEEcccceecCCccccccc
Confidence 44445544 5799999999763 22 345678999999999999999997 665 67889988876321
Q ss_pred --cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEeccCCC
Q psy16243 342 --IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEP 419 (782)
Q Consensus 342 --~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~~~p 419 (782)
++.|+.. +.+..+.||.||.++|+++..+. ...++|+..+||....
T Consensus 496 ~~p~~E~~~----------------------------~~~~~~~Yg~sK~~~E~~~~~~~---~~~~~r~~~~~~~~~~- 543 (668)
T PLN02260 496 GIGFKEEDK----------------------------PNFTGSFYSKTKAMVEELLREYD---NVCTLRVRMPISSDLS- 543 (668)
T ss_pred CCCCCcCCC----------------------------CCCCCChhhHHHHHHHHHHHhhh---hheEEEEEEecccCCC-
Confidence 2333211 01112889999999999998873 4578888888863211
Q ss_pred CcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhh
Q psy16243 420 IPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEK 499 (782)
Q Consensus 420 ~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 499 (782)
++.+++..+.++...... + .....+|+++.+++.++..
T Consensus 544 -----------------------------~~~nfv~~~~~~~~~~~v--p---~~~~~~~~~~~~~~~l~~~-------- 581 (668)
T PLN02260 544 -----------------------------NPRNFITKISRYNKVVNI--P---NSMTVLDELLPISIEMAKR-------- 581 (668)
T ss_pred -----------------------------CccHHHHHHhccceeecc--C---CCceehhhHHHHHHHHHHh--------
Confidence 011344444443321111 1 2356678888887776642
Q ss_pred hhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccc
Q psy16243 500 KAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVP 547 (782)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~ 547 (782)
..+++||++++ .++||.|+++.+.+..+
T Consensus 582 ------------------~~~giyni~~~--~~~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 582 ------------------NLRGIWNFTNP--GVVSHNEILEMYKDYID 609 (668)
T ss_pred ------------------CCCceEEecCC--CcCcHHHHHHHHHHhcC
Confidence 12589999999 88999999999988754
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.44 E-value=9e-13 Score=133.29 Aligned_cols=256 Identities=16% Similarity=0.157 Sum_probs=180.8
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.|+.+|||.+|+.|++|+ +.|+++ ++.|+-+.|..+..+. .|+ .+.+.+..
T Consensus 2 ~K~ALITGITGQDGsYLa----~lLLek---------------GY~VhGi~Rrss~~n~-~ri-~L~~~~~~-------- 52 (345)
T COG1089 2 GKVALITGITGQDGSYLA----ELLLEK---------------GYEVHGIKRRSSSFNT-PRI-HLYEDPHL-------- 52 (345)
T ss_pred CceEEEecccCCchHHHH----HHHHhc---------------CcEEEEEeeccccCCc-ccc-eecccccc--------
Confidence 588999999999999983 445444 7889999997553322 222 22222111
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCc--eEEEEcCccc----CchhhHHHHHHhhHHHHHHHHHHHHHccC-Cc
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNI--HVVFHCAATV----RFDAHLKVAVSINLRATKALLEMAKEMKQ-LK 326 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~v--diViH~Aa~v----~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~-~~ 326 (782)
...++..+.||++|. ..+.++++.+ |-|+|+||.. +|..+ ....+++..||.+|||+.+..+. -.
T Consensus 53 -~~~~l~l~~gDLtD~------~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P-~~T~~~~~iGtlrlLEaiR~~~~~~~ 124 (345)
T COG1089 53 -NDPRLHLHYGDLTDS------SNLLRILEEVQPDEIYNLAAQSHVGVSFEQP-EYTADVDAIGTLRLLEAIRILGEKKT 124 (345)
T ss_pred -CCceeEEEeccccch------HHHHHHHHhcCchhheeccccccccccccCc-ceeeeechhHHHHHHHHHHHhCCccc
Confidence 234699999999998 7888888875 8999999974 44333 34567899999999999998743 46
Q ss_pred eEEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCC
Q psy16243 327 SFVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGM 402 (782)
Q Consensus 327 ~fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~gl 402 (782)
+|...||+..||... +..|+ +|..|. ++|+.+|..|--+...+. .|+
T Consensus 125 rfYQAStSE~fG~v~~~pq~E~--------------------------TPFyPr---SPYAvAKlYa~W~tvNYResYgl 175 (345)
T COG1089 125 RFYQASTSELYGLVQEIPQKET--------------------------TPFYPR---SPYAVAKLYAYWITVNYRESYGL 175 (345)
T ss_pred EEEecccHHhhcCcccCccccC--------------------------CCCCCC---CHHHHHHHHHHheeeehHhhcCc
Confidence 899999999998754 33333 444444 999999999998887773 355
Q ss_pred cEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCcee-eeccCCCccccccchhHH
Q psy16243 403 PVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLR-SMHADPELVADMVPADNV 481 (782)
Q Consensus 403 p~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~d~VpVDdv 481 (782)
-.+ .|+.+- .++|..|. ..+ ....+..+..+..|... ...|+-+..+||=+..|-
T Consensus 176 ~Ac---nGILFN-HESP~Rge------------------~FV--TRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DY 231 (345)
T COG1089 176 FAC---NGILFN-HESPLRGE------------------TFV--TRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDY 231 (345)
T ss_pred eee---cceeec-CCCCCCcc------------------cee--hHHHHHHHHHHHccccceEEeccccccccccchHHH
Confidence 333 344442 33444321 011 11233445555667554 457899999999999999
Q ss_pred HHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccc
Q psy16243 482 INCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVP 547 (782)
Q Consensus 482 a~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~ 547 (782)
+++++..+.+. ....|.++++ ...|.+|+++...+..|
T Consensus 232 Ve~mwlmLQq~--------------------------~PddyViATg--~t~sVrefv~~Af~~~g 269 (345)
T COG1089 232 VEAMWLMLQQE--------------------------EPDDYVIATG--ETHSVREFVELAFEMVG 269 (345)
T ss_pred HHHHHHHHccC--------------------------CCCceEEecC--ceeeHHHHHHHHHHHcC
Confidence 99999998653 3678999999 88999999999988776
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-11 Score=131.11 Aligned_cols=158 Identities=22% Similarity=0.245 Sum_probs=107.1
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.|+++|||..++.|..+ .+.|.. .+.+|+++.|... ++.++.+
T Consensus 2 ~k~vlVtGasg~IG~~l----a~~L~~---------------~g~~v~~~~r~~~------~~~~~~~------------ 44 (276)
T PRK06482 2 SKTWFITGASSGFGRGM----TERLLA---------------RGDRVAATVRRPD------ALDDLKA------------ 44 (276)
T ss_pred CCEEEEecCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHH------HHHHHHH------------
Confidence 47899999655554443 233322 1467888888632 2222111
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a 319 (782)
....++.++.+|++++ +++..+++ .+|+|||+|+..... +..+..+++|+.|+.++++++
T Consensus 45 ~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~ 118 (276)
T PRK06482 45 RYGDRLWVLQLDVTDS------AAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAA 118 (276)
T ss_pred hccCceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 0113678899999998 66665543 479999999875332 334567889999999999997
Q ss_pred ----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 320 ----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 320 ----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
++. +..++|++||....... | ..+.|+.||+..|.++
T Consensus 119 ~~~~~~~-~~~~iv~~sS~~~~~~~---------------------------------~-----~~~~Y~~sK~a~~~~~ 159 (276)
T PRK06482 119 LPHLRRQ-GGGRIVQVSSEGGQIAY---------------------------------P-----GFSLYHATKWGIEGFV 159 (276)
T ss_pred HHHHHhc-CCCEEEEEcCcccccCC---------------------------------C-----CCchhHHHHHHHHHHH
Confidence 333 56899999997532110 0 1168999999999988
Q ss_pred HHc-----CCCCcEEEecCCeEE
Q psy16243 396 RRG-----GAGMPVAMVRPSIVI 413 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~ 413 (782)
..+ ..|++++++|||.+.
T Consensus 160 ~~l~~~~~~~gi~v~~v~pg~~~ 182 (276)
T PRK06482 160 EAVAQEVAPFGIEFTIVEPGPAR 182 (276)
T ss_pred HHHHHHhhccCcEEEEEeCCccc
Confidence 765 248999999999873
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.8e-11 Score=121.31 Aligned_cols=175 Identities=17% Similarity=0.226 Sum_probs=119.8
Q ss_pred CceEEEEcCccc----CchhhHH-HHHHhhHHHHHHHHHHHHHcc-CCceEEEEecceeccCCC--cccccccCCCCChh
Q psy16243 284 NIHVVFHCAATV----RFDAHLK-VAVSINLRATKALLEMAKEMK-QLKSFVHVSTAYSNCRQP--IIEERFYEPPVNPN 355 (782)
Q Consensus 284 ~vdiViH~Aa~v----~f~~~~~-~~~~~Nv~gt~~Lle~a~~~~-~~~~fV~vST~~v~~~~~--~i~E~~~~~~~~~~ 355 (782)
++|+|||+|+.. +++...+ +..+.-+..|+.|.++..++. +.+.||--|.+.-||+.. .++|+ -++
T Consensus 56 ~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~-~~~----- 129 (297)
T COG1090 56 GIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEE-SPP----- 129 (297)
T ss_pred CCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecC-CCC-----
Confidence 699999999974 2444444 577888999999999977543 455666666677788754 55665 111
Q ss_pred HHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH---HHHHHHc-CCCCcEEEecCCeEEeccCCCCcccccccCCcc
Q psy16243 356 HLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA---EDMVRRG-GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPT 431 (782)
Q Consensus 356 ~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a---E~ll~~~-~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~ 431 (782)
+-++.--+| |.....+ ..|.+++++|.|+|.|+...-
T Consensus 130 ---------------------------g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGa------------ 170 (297)
T COG1090 130 ---------------------------GDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGA------------ 170 (297)
T ss_pred ---------------------------CCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcc------------
Confidence 111111111 3333334 348899999999999964321
Q ss_pred cccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccC
Q psy16243 432 VIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLD 511 (782)
Q Consensus 432 ~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~ 511 (782)
...+-.+ ...+.| .-.|+|.+...|||+||+++++.-+..+.
T Consensus 171 ------------L~~m~~~----fk~glG---G~~GsGrQ~~SWIhieD~v~~I~fll~~~------------------- 212 (297)
T COG1090 171 ------------LGKMLPL----FKLGLG---GKLGSGRQWFSWIHIEDLVNAILFLLENE------------------- 212 (297)
T ss_pred ------------hhhhcch----hhhccC---CccCCCCceeeeeeHHHHHHHHHHHHhCc-------------------
Confidence 1111111 111222 24578999999999999999999998763
Q ss_pred CCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 512 KNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 512 ~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
.-.+.||+++| +|++..+|...+.+.+++.
T Consensus 213 ------~lsGp~N~taP--~PV~~~~F~~al~r~l~RP 242 (297)
T COG1090 213 ------QLSGPFNLTAP--NPVRNKEFAHALGRALHRP 242 (297)
T ss_pred ------CCCCcccccCC--CcCcHHHHHHHHHHHhCCC
Confidence 34689999999 9999999999999987753
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.2e-11 Score=129.77 Aligned_cols=234 Identities=18% Similarity=0.193 Sum_probs=144.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
-..+.++|||.+|..|..+ .+.|.. .+.+|+++.|..+. .....
T Consensus 15 ~~~~~ilItGasG~iG~~l----~~~L~~---------------~g~~V~~~~R~~~~------~~~~~----------- 58 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRI----VEQLLA---------------KGFAVKAGVRDVDK------AKTSL----------- 58 (251)
T ss_pred ccCCeEEEECCCcHHHHHH----HHHHHh---------------CCCEEEEEecCHHH------HHHhc-----------
Confidence 3467899999555555443 233322 25678888886431 11111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh-cCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV-DNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~-~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
+. ..+++++.+|+++. .+++.+.+ .++|+|||+++..... .....+++|..|+.++++++++. +++++|+
T Consensus 59 -~~-~~~~~~~~~Dl~d~-----~~~l~~~~~~~~d~vi~~~g~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~~iV~ 129 (251)
T PLN00141 59 -PQ-DPSLQIVRADVTEG-----SDKLVEAIGDDSDAVICATGFRRSF-DPFAPWKVDNFGTVNLVEACRKA-GVTRFIL 129 (251)
T ss_pred -cc-CCceEEEEeeCCCC-----HHHHHHHhhcCCCEEEECCCCCcCC-CCCCceeeehHHHHHHHHHHHHc-CCCEEEE
Confidence 00 13688999999974 14565666 6899999998853211 11223578999999999999886 7899999
Q ss_pred EecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCC
Q psy16243 331 VSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPS 410 (782)
Q Consensus 331 vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~ 410 (782)
+||.++|+.... ..+.+...+. .....|..+|..+|.++.. .+++++++||+
T Consensus 130 iSS~~v~g~~~~---~~~~~~~~~~-----------------------~~~~~~~~~k~~~e~~l~~--~gi~~~iirpg 181 (251)
T PLN00141 130 VSSILVNGAAMG---QILNPAYIFL-----------------------NLFGLTLVAKLQAEKYIRK--SGINYTIVRPG 181 (251)
T ss_pred EccccccCCCcc---cccCcchhHH-----------------------HHHHHHHHHHHHHHHHHHh--cCCcEEEEECC
Confidence 999998874321 0000000000 0002355679999988775 38999999999
Q ss_pred eEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhh
Q psy16243 411 IVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAW 490 (782)
Q Consensus 411 ~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 490 (782)
.+++.... +. ....++ ......+|+.+|+++++..++.
T Consensus 182 ~~~~~~~~-----------------------~~------------------~~~~~~-~~~~~~~i~~~dvA~~~~~~~~ 219 (251)
T PLN00141 182 GLTNDPPT-----------------------GN------------------IVMEPE-DTLYEGSISRDQVAEVAVEALL 219 (251)
T ss_pred CccCCCCC-----------------------ce------------------EEECCC-CccccCcccHHHHHHHHHHHhc
Confidence 98863211 00 000000 1111246899999999999986
Q ss_pred hccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCc-ccHHHHHHHHHh
Q psy16243 491 NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKP-IKWKEFMALNEK 544 (782)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~-~t~~el~~~i~~ 544 (782)
.. .....++.+.+...++ .+++++...+.+
T Consensus 220 ~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 220 CP------------------------ESSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred Ch------------------------hhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 53 1235677777744454 788888876653
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.35 E-value=9.5e-12 Score=123.85 Aligned_cols=161 Identities=19% Similarity=0.233 Sum_probs=119.4
Q ss_pred cceeeeeecccchhhHHHHHHHhhcccccccccccCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccC
Q psy16243 217 HLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVR 296 (782)
Q Consensus 217 ~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~ 296 (782)
+.+|++++|..... .+ ..+++++.+|+.++ +++.+.++++|+|||+++...
T Consensus 22 ~~~V~~~~R~~~~~--~~---------------------~~~~~~~~~d~~d~------~~~~~al~~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 22 GHEVTALVRSPSKA--ED---------------------SPGVEIIQGDLFDP------DSVKAALKGADAVIHAAGPPP 72 (183)
T ss_dssp TSEEEEEESSGGGH--HH---------------------CTTEEEEESCTTCH------HHHHHHHTTSSEEEECCHSTT
T ss_pred CCEEEEEecCchhc--cc---------------------ccccccceeeehhh------hhhhhhhhhcchhhhhhhhhc
Confidence 58999999985521 11 24899999999988 899999999999999997543
Q ss_pred chhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCc
Q psy16243 297 FDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGI 376 (782)
Q Consensus 297 f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~ 376 (782)
. ....+++++++|++. +++++|++||.+++.....-.....
T Consensus 73 ~----------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~~~~~~---------------------------- 113 (183)
T PF13460_consen 73 K----------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGLFSDED---------------------------- 113 (183)
T ss_dssp T----------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSEEEGGT----------------------------
T ss_pred c----------ccccccccccccccc-ccccceeeeccccCCCCCccccccc----------------------------
Confidence 3 167789999999997 8999999999998875432100000
Q ss_pred cCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHH
Q psy16243 377 VDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAG 456 (782)
Q Consensus 377 ~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~ 456 (782)
.+.+..|...|..+|+.+.+. +++++++||+.++|+...+..
T Consensus 114 -~~~~~~~~~~~~~~e~~~~~~--~~~~~ivrp~~~~~~~~~~~~----------------------------------- 155 (183)
T PF13460_consen 114 -KPIFPEYARDKREAEEALRES--GLNWTIVRPGWIYGNPSRSYR----------------------------------- 155 (183)
T ss_dssp -CGGGHHHHHHHHHHHHHHHHS--TSEEEEEEESEEEBTTSSSEE-----------------------------------
T ss_pred -ccchhhhHHHHHHHHHHHHhc--CCCEEEEECcEeEeCCCccee-----------------------------------
Confidence 001157899999999999753 899999999999996432111
Q ss_pred hhcCceeeeccCCCccccccchhHHHHHHHHhhh
Q psy16243 457 AGLGLLRSMHADPELVADMVPADNVINCIISAAW 490 (782)
Q Consensus 457 ~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 490 (782)
.....+.....+|+++|+|.+++.++.
T Consensus 156 -------~~~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 156 -------LIKEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp -------EESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred -------EEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence 011133455689999999999998874
|
... |
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.9e-11 Score=119.53 Aligned_cols=205 Identities=17% Similarity=0.140 Sum_probs=150.1
Q ss_pred cCCCCCCCCCCHHhHHHHhcCc--eEEEEcCcccCc---h-hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceec
Q psy16243 264 GDCLKPGVGINSEDRQTLVDNI--HVVFHCAATVRF---D-AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSN 337 (782)
Q Consensus 264 gDi~~~~lGl~~~~~~~l~~~v--diViH~Aa~v~f---~-~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~ 337 (782)
.|+++. ++.+.+++.. ..|||+||.++- + ....++++.|+.--.|++..|-+. +++++++.-|..++
T Consensus 39 ~DLt~~------a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCIf 111 (315)
T KOG1431|consen 39 ADLTNL------ADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCIF 111 (315)
T ss_pred ccccch------HHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceeec
Confidence 466655 7777787754 899999999742 1 223468899999999999999998 89999999998888
Q ss_pred cCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecCCeEE
Q psy16243 338 CRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIVI 413 (782)
Q Consensus 338 ~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp~~v~ 413 (782)
++.. +|+|+.... .| +.+-..+|+..|.++.-.-++| ..|...+.+-|.++|
T Consensus 112 Pdkt~yPIdEtmvh~----------------------gp--phpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvf 167 (315)
T KOG1431|consen 112 PDKTSYPIDETMVHN----------------------GP--PHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVF 167 (315)
T ss_pred CCCCCCCCCHHHhcc----------------------CC--CCCCchHHHHHHHHHHHHHHHHHHHhCCceeeecccccc
Confidence 8754 788875421 01 1111258999999888777777 458888999999999
Q ss_pred eccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHh----hcCc-eeeeccCCCccccccchhHHHHHHHHh
Q psy16243 414 ATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGA----GLGL-LRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 414 G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~----~~g~-~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
||...-.| -|.+..| +++..+ ..|. ....+|.|...+.|+|+||+|++++-.
T Consensus 168 GphDNfnp-------------e~sHVlP----------ali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~v 224 (315)
T KOG1431|consen 168 GPHDNFNP-------------ENSHVLP----------ALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWV 224 (315)
T ss_pred CCCCCCCc-------------ccccchH----------HHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHH
Confidence 98765433 1222222 344333 3444 557889999999999999999999888
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccc
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVP 547 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~ 547 (782)
+..- ...+-.+++.+....+|++|+++.+.+..+
T Consensus 225 lr~Y-------------------------~~vEpiils~ge~~EVtI~e~aeaV~ea~~ 258 (315)
T KOG1431|consen 225 LREY-------------------------EGVEPIILSVGESDEVTIREAAEAVVEAVD 258 (315)
T ss_pred HHhh-------------------------cCccceEeccCccceeEHHHHHHHHHHHhC
Confidence 7541 234566788886679999999999999765
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.3e-11 Score=130.23 Aligned_cols=208 Identities=14% Similarity=0.135 Sum_probs=137.4
Q ss_pred eeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCccc
Q psy16243 176 MVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHY 255 (782)
Q Consensus 176 ~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~ 255 (782)
.|+|||.+|..|..+ .+.|.. .+.+|.+++|..+...
T Consensus 1 ~ilVtGatG~iG~~v----v~~L~~---------------~g~~V~~~~R~~~~~~------------------------ 37 (285)
T TIGR03649 1 TILLTGGTGKTASRI----ARLLQA---------------ASVPFLVASRSSSSSA------------------------ 37 (285)
T ss_pred CEEEEcCCChHHHHH----HHHHHh---------------CCCcEEEEeCCCcccc------------------------
Confidence 379999555555443 233322 1567899999754110
Q ss_pred ccceeEEecCCCCCCCCCCHHhHHHHh------cC-ceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceE
Q psy16243 256 LSKMVAVTGDCLKPGVGINSEDRQTLV------DN-IHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSF 328 (782)
Q Consensus 256 ~~kv~~i~gDi~~~~lGl~~~~~~~l~------~~-vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~f 328 (782)
...++.+.+|+.++ +.+..++ ++ +|.|+|+++.... ....+.+++++|++. ++++|
T Consensus 38 ~~~~~~~~~d~~d~------~~l~~a~~~~~~~~g~~d~v~~~~~~~~~----------~~~~~~~~i~aa~~~-gv~~~ 100 (285)
T TIGR03649 38 GPNEKHVKFDWLDE------DTWDNPFSSDDGMEPEISAVYLVAPPIPD----------LAPPMIKFIDFARSK-GVRRF 100 (285)
T ss_pred CCCCccccccCCCH------HHHHHHHhcccCcCCceeEEEEeCCCCCC----------hhHHHHHHHHHHHHc-CCCEE
Confidence 12456678999888 7888887 56 9999999875321 123467899999998 89999
Q ss_pred EEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEec
Q psy16243 329 VHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVR 408 (782)
Q Consensus 329 V~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvR 408 (782)
||+||..+.... ..+...|..+... .|++.+++|
T Consensus 101 V~~Ss~~~~~~~---------------------------------------------~~~~~~~~~l~~~-~gi~~tilR 134 (285)
T TIGR03649 101 VLLSASIIEKGG---------------------------------------------PAMGQVHAHLDSL-GGVEYTVLR 134 (285)
T ss_pred EEeeccccCCCC---------------------------------------------chHHHHHHHHHhc-cCCCEEEEe
Confidence 999987543210 0111234444332 489999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhh-cCceeeeccCCCccccccchhHHHHHHHH
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAG-LGLLRSMHADPELVADMVPADNVINCIIS 487 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~d~VpVDdva~aii~ 487 (782)
|+..+.....+. ....+. .|.+ ..+.++...++|+++|++.++..
T Consensus 135 p~~f~~~~~~~~--------------------------------~~~~~~~~~~~--~~~~g~~~~~~v~~~Dva~~~~~ 180 (285)
T TIGR03649 135 PTWFMENFSEEF--------------------------------HVEAIRKENKI--YSATGDGKIPFVSADDIARVAYR 180 (285)
T ss_pred ccHHhhhhcccc--------------------------------cccccccCCeE--EecCCCCccCcccHHHHHHHHHH
Confidence 998775321110 000011 1222 23456778899999999999988
Q ss_pred hhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 488 AAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 488 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
++... ...++.|+++++ ..+|+.|+++.+.+.+|+.
T Consensus 181 ~l~~~------------------------~~~~~~~~l~g~--~~~s~~eia~~l~~~~g~~ 216 (285)
T TIGR03649 181 ALTDK------------------------VAPNTDYVVLGP--ELLTYDDVAEILSRVLGRK 216 (285)
T ss_pred HhcCC------------------------CcCCCeEEeeCC--ccCCHHHHHHHHHHHhCCc
Confidence 87542 134678999998 8999999999999998864
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.9e-11 Score=128.80 Aligned_cols=166 Identities=19% Similarity=0.152 Sum_probs=110.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ .+.|.. .+.+|.++.|... ...+..+++.+
T Consensus 5 ~~~~~vlItGasg~iG~~l----a~~l~~---------------~G~~v~~~~r~~~--~~~~~~~~~~~---------- 53 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEI----ALELAR---------------AGAAVAIADLNQD--GANAVADEINK---------- 53 (262)
T ss_pred CCCCEEEEECCCChHHHHH----HHHHHH---------------CCCeEEEEeCChH--HHHHHHHHHHh----------
Confidence 3478999999655555443 233322 2567787777642 11222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHH----HH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRA----TK 313 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~g----t~ 313 (782)
...++.++.+|++++ +.++++++ .+|+|||+|+..... +.++..+++|+.| ++
T Consensus 54 ---~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 124 (262)
T PRK13394 54 ---AGGKAIGVAMDVTNE------DAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTK 124 (262)
T ss_pred ---cCceEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHH
Confidence 113578899999987 66665554 379999999975321 3345678899999 77
Q ss_pred HHHHHH-HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 314 ALLEMA-KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 314 ~Lle~a-~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+++++ +.. +.+++|++||.+..... +..+.|+.+|...+
T Consensus 125 ~~l~~~~~~~-~~~~iv~~ss~~~~~~~--------------------------------------~~~~~y~~sk~a~~ 165 (262)
T PRK13394 125 AALKHMYKDD-RGGVVIYMGSVHSHEAS--------------------------------------PLKSAYVTAKHGLL 165 (262)
T ss_pred HHHHHHHhhc-CCcEEEEEcchhhcCCC--------------------------------------CCCcccHHHHHHHH
Confidence 777777 443 67899999997543210 01167999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+++.+ ..++.++++||+.++++.
T Consensus 166 ~~~~~la~~~~~~~i~v~~v~pg~v~~~~ 194 (262)
T PRK13394 166 GLARVLAKEGAKHNVRSHVVCPGFVRTPL 194 (262)
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCcccchh
Confidence 887765 248999999999999864
|
|
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.8e-11 Score=122.24 Aligned_cols=239 Identities=18% Similarity=0.196 Sum_probs=166.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+-+.-|-|++|+.|.++ |-|+|.. +.+|++--|.....- .+++-+
T Consensus 59 ~sGiVaTVFGAtGFlGryv--------------vnklak~-----GSQviiPyR~d~~~~--r~lkvm------------ 105 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYV--------------VNKLAKM-----GSQVIIPYRGDEYDP--RHLKVM------------ 105 (391)
T ss_pred ccceEEEEecccccccHHH--------------HHHHhhc-----CCeEEEeccCCccch--hheeec------------
Confidence 3455677888666666444 2233332 677888777644211 111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEE
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHV 331 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~v 331 (782)
.....+.+..-|+.|+ +++....+..++||++-+. ++...--.+.++|+.+.++|+..|+++ ++.+|||+
T Consensus 106 --GdLGQvl~~~fd~~De------dSIr~vvk~sNVVINLIGr-d~eTknf~f~Dvn~~~aerlAricke~-GVerfIhv 175 (391)
T KOG2865|consen 106 --GDLGQVLFMKFDLRDE------DSIRAVVKHSNVVINLIGR-DYETKNFSFEDVNVHIAERLARICKEA-GVERFIHV 175 (391)
T ss_pred --ccccceeeeccCCCCH------HHHHHHHHhCcEEEEeecc-ccccCCcccccccchHHHHHHHHHHhh-Chhheeeh
Confidence 1245788889999988 8999999999999999875 222222247789999999999999998 99999999
Q ss_pred ecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCe
Q psy16243 332 STAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSI 411 (782)
Q Consensus 332 ST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~ 411 (782)
|+..++-. .++-|-.+|+++|..++++-. ..+|+||+.
T Consensus 176 S~Lganv~----------------------------------------s~Sr~LrsK~~gE~aVrdafP--eAtIirPa~ 213 (391)
T KOG2865|consen 176 SCLGANVK----------------------------------------SPSRMLRSKAAGEEAVRDAFP--EATIIRPAD 213 (391)
T ss_pred hhcccccc----------------------------------------ChHHHHHhhhhhHHHHHhhCC--cceeechhh
Confidence 99864311 126788999999999998733 358999999
Q ss_pred EEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhh
Q psy16243 412 VIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWN 491 (782)
Q Consensus 412 v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~ 491 (782)
|||..+.- -.+...+..- .|.++......+.....|+|-|||.+|+.|+..
T Consensus 214 iyG~eDrf----------------------------ln~ya~~~rk-~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkD 264 (391)
T KOG2865|consen 214 IYGTEDRF----------------------------LNYYASFWRK-FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKD 264 (391)
T ss_pred hcccchhH----------------------------HHHHHHHHHh-cCceeeecCCcceeeccEEEehHHHHHHHhccC
Confidence 99854321 1111111111 344444444446778899999999999999976
Q ss_pred ccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 492 VHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
+ +..+.+|..+++ ....+.|+++++.+...+-|
T Consensus 265 p------------------------~s~Gktye~vGP--~~yql~eLvd~my~~~~~~~ 297 (391)
T KOG2865|consen 265 P------------------------DSMGKTYEFVGP--DRYQLSELVDIMYDMAREWP 297 (391)
T ss_pred c------------------------cccCceeeecCC--chhhHHHHHHHHHHHHhhcc
Confidence 4 357899999999 88999999999887665433
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.8e-10 Score=120.70 Aligned_cols=164 Identities=17% Similarity=0.196 Sum_probs=107.9
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||.++..|..+ .+.|.. .+.+|+++.|.... .+.+.+..+.
T Consensus 1 ~~~vlItGa~g~lG~~l----~~~l~~---------------~g~~v~~~~r~~~~---~~~~~~~~~~----------- 47 (255)
T TIGR01963 1 GKTALVTGAASGIGLAI----ALALAA---------------AGANVVVNDLGEAG---AEAAAKVATD----------- 47 (255)
T ss_pred CCEEEEcCCcchHHHHH----HHHHHH---------------CCCEEEEEeCCHHH---HHHHHHHHHh-----------
Confidence 36899999554444333 233321 25678888886321 2222221110
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHH-------hcCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTL-------VDNIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
...++.++.+|++++ +++..+ +..+|+|||+|+.... .+.+++.++.|+.|+..+++.+
T Consensus 48 -~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~ 120 (255)
T TIGR01963 48 -AGGSVIYLVADVTKE------DEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAA 120 (255)
T ss_pred -cCCceEEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 113688999999987 644433 3457999999987432 1234567889999988888876
Q ss_pred ----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 320 ----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 320 ----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
++. +.+++|++||...+.... ....|+.+|...|.++
T Consensus 121 ~~~~~~~-~~~~~v~~ss~~~~~~~~--------------------------------------~~~~y~~sk~a~~~~~ 161 (255)
T TIGR01963 121 LPHMKKQ-GWGRIINIASAHGLVASP--------------------------------------FKSAYVAAKHGLIGLT 161 (255)
T ss_pred HHHHHhc-CCeEEEEEcchhhcCCCC--------------------------------------CCchhHHHHHHHHHHH
Confidence 333 578999999975543210 0157999999999888
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.+ ..+++++++||+.++++.
T Consensus 162 ~~~~~~~~~~~i~v~~i~pg~v~~~~ 187 (255)
T TIGR01963 162 KVLALEVAAHGITVNAICPGYVRTPL 187 (255)
T ss_pred HHHHHHhhhcCeEEEEEecCccccHH
Confidence 755 248999999999998863
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.4e-10 Score=121.57 Aligned_cols=162 Identities=17% Similarity=0.183 Sum_probs=108.7
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.+ .+.+|+++.|.... .+.+.+.
T Consensus 2 ~~k~vlItGasg~iG~~~----a~~l~~---------------~g~~V~~~~r~~~~---~~~~~~~------------- 46 (275)
T PRK08263 2 MEKVWFITGASRGFGRAW----TEAALE---------------RGDRVVATARDTAT---LADLAEK------------- 46 (275)
T ss_pred CCCEEEEeCCCChHHHHH----HHHHHH---------------CCCEEEEEECCHHH---HHHHHHh-------------
Confidence 367899999554444333 223322 24678888886331 1122111
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++..+.+|++++ +++..+++ .+|+|||+||.... .+.++..+++|+.|+..+++.
T Consensus 47 --~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 118 (275)
T PRK08263 47 --YGDRLLPLALDVTDR------AAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQA 118 (275)
T ss_pred --ccCCeeEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHH
Confidence 013577889999987 66655544 46999999997543 145667899999999888877
Q ss_pred H----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 319 A----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 319 a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+ ++. +..++|++||.+.+.... ....|+.||+..|.+
T Consensus 119 ~~~~~~~~-~~~~iv~vsS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~ 159 (275)
T PRK08263 119 VLPYLREQ-RSGHIIQISSIGGISAFP--------------------------------------MSGIYHASKWALEGM 159 (275)
T ss_pred HHHHHHhc-CCCEEEEEcChhhcCCCC--------------------------------------CccHHHHHHHHHHHH
Confidence 5 333 567999999986654311 015799999998888
Q ss_pred HHHc-----CCCCcEEEecCCeEEecc
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.... ..|+++.++|||.+..+.
T Consensus 160 ~~~la~e~~~~gi~v~~v~Pg~~~t~~ 186 (275)
T PRK08263 160 SEALAQEVAEFGIKVTLVEPGGYSTDW 186 (275)
T ss_pred HHHHHHHhhhhCcEEEEEecCCccCCc
Confidence 7665 258999999999887643
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.1e-10 Score=119.87 Aligned_cols=168 Identities=18% Similarity=0.066 Sum_probs=113.7
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+...++.+
T Consensus 5 ~~~~ilItGasg~iG~~l----~~~l~~---------------~g~~V~~~~r~~~--~~~~~~~~l~~----------- 52 (251)
T PRK12826 5 EGRVALVTGAARGIGRAI----AVRLAA---------------DGAEVIVVDICGD--DAAATAELVEA----------- 52 (251)
T ss_pred CCCEEEEcCCCCcHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHh-----------
Confidence 468899999554444333 233322 1467888888642 12222222211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ +++.++++ .+|+|||+|+.... .+.+...+++|+.|+.++++.
T Consensus 53 --~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 124 (251)
T PRK12826 53 --AGGKARARQVDVRDR------AALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQA 124 (251)
T ss_pred --cCCeEEEEECCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHH
Confidence 113588899999987 67777665 57999999988654 134556889999999999998
Q ss_pred HHH---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKE---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+.. ..+.++||++||........ +....|+.+|..+|.++
T Consensus 125 ~~~~~~~~~~~~ii~~ss~~~~~~~~-------------------------------------~~~~~y~~sK~a~~~~~ 167 (251)
T PRK12826 125 ALPALIRAGGGRIVLTSSVAGPRVGY-------------------------------------PGLAHYAASKAGLVGFT 167 (251)
T ss_pred HHHHHHHcCCcEEEEEechHhhccCC-------------------------------------CCccHHHHHHHHHHHHH
Confidence 742 12568899999986541100 01157999999999998
Q ss_pred HHc-----CCCCcEEEecCCeEEeccC
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATNK 417 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~~ 417 (782)
..+ ..+++++++||+.++|+..
T Consensus 168 ~~~~~~~~~~~i~~~~i~pg~~~~~~~ 194 (251)
T PRK12826 168 RALALELAARNITVNSVHPGGVDTPMA 194 (251)
T ss_pred HHHHHHHHHcCeEEEEEeeCCCCcchh
Confidence 776 2489999999999998643
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.9e-10 Score=128.29 Aligned_cols=178 Identities=20% Similarity=0.227 Sum_probs=116.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||.+|+.|..+ .+.|+. .+.+|.++.|.... ..+...++.+.. .+ ..
T Consensus 78 ~~gKvVLVTGATGgIG~aL----Ar~LLk---------------~G~~Vval~Rn~ek--l~~l~~~l~~~~-L~---~~ 132 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRT----VRELLK---------------LGFRVRAGVRSAQR--AESLVQSVKQMK-LD---VE 132 (576)
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCeEEEEeCCHHH--HHHHHHHhhhhc-cc---cc
Confidence 4578999999555444433 233322 25788888886432 111111111100 00 00
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch-hhHHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD-AHLKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~-~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
......++.++.||+++. +++...+.++|+|||+|+..... ......+++|+.|+.+++++|+.. ++++||+
T Consensus 133 Ga~~~~~v~iV~gDLtD~------esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~ 205 (576)
T PLN03209 133 GTQPVEKLEIVECDLEKP------DQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFIL 205 (576)
T ss_pred cccccCceEEEEecCCCH------HHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEE
Confidence 001124689999999987 78888899999999999865321 134456789999999999999987 7899999
Q ss_pred EecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCC
Q psy16243 331 VSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPS 410 (782)
Q Consensus 331 vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~ 410 (782)
+||.++..... .+..+. ....|...|..+|..+.. .|++++|+|||
T Consensus 206 VSSiga~~~g~--p~~~~~------------------------------sk~~~~~~KraaE~~L~~--sGIrvTIVRPG 251 (576)
T PLN03209 206 VTSLGTNKVGF--PAAILN------------------------------LFWGVLCWKRKAEEALIA--SGLPYTIVRPG 251 (576)
T ss_pred EccchhcccCc--cccchh------------------------------hHHHHHHHHHHHHHHHHH--cCCCEEEEECC
Confidence 99987632110 000000 015688889999998875 48999999999
Q ss_pred eEEec
Q psy16243 411 IVIAT 415 (782)
Q Consensus 411 ~v~G~ 415 (782)
.+.++
T Consensus 252 ~L~tp 256 (576)
T PLN03209 252 GMERP 256 (576)
T ss_pred eecCC
Confidence 99865
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.4e-10 Score=118.01 Aligned_cols=165 Identities=16% Similarity=0.134 Sum_probs=108.1
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+...++..
T Consensus 3 ~~~~vlItG~sg~iG~~l----a~~l~~---------------~g~~v~~~~r~~~~--~~~~~~~~~~----------- 50 (258)
T PRK12429 3 KGKVALVTGAASGIGLEI----ALALAK---------------EGAKVVIADLNDEA--AAAAAEALQK----------- 50 (258)
T ss_pred CCCEEEEECCCchHHHHH----HHHHHH---------------CCCeEEEEeCCHHH--HHHHHHHHHh-----------
Confidence 468999999655555443 233321 25688888886432 1111222211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++..+.+|++++ +++..+++ .+|+|||+|+..... +.++..+++|+.|+.++++.
T Consensus 51 --~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 122 (258)
T PRK12429 51 --AGGKAIGVAMDVTDE------EAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKA 122 (258)
T ss_pred --cCCcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHH
Confidence 124688899999987 66666655 579999999865332 23445778999995555544
Q ss_pred ----HHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 319 ----AKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 319 ----a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+++. +.++||++||.+...... ..+.|+.+|...+.+
T Consensus 123 ~~~~~~~~-~~~~iv~iss~~~~~~~~--------------------------------------~~~~y~~~k~a~~~~ 163 (258)
T PRK12429 123 ALPIMKAQ-GGGRIINMASVHGLVGSA--------------------------------------GKAAYVSAKHGLIGL 163 (258)
T ss_pred HHHHHHhc-CCeEEEEEcchhhccCCC--------------------------------------CcchhHHHHHHHHHH
Confidence 4443 678999999986543210 016799999988887
Q ss_pred HHHc-----CCCCcEEEecCCeEEecc
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+.+ ..++.+.++||+.+.+|.
T Consensus 164 ~~~l~~~~~~~~i~v~~~~pg~v~~~~ 190 (258)
T PRK12429 164 TKVVALEGATHGVTVNAICPGYVDTPL 190 (258)
T ss_pred HHHHHHHhcccCeEEEEEecCCCcchh
Confidence 7654 247899999999998864
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.6e-10 Score=117.10 Aligned_cols=169 Identities=21% Similarity=0.210 Sum_probs=106.1
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+++++|||..++.|..+ .+.|.. .+.+|+++.|.... ..+.+.+.++.
T Consensus 5 ~~~~vlItGa~g~iG~~l----~~~l~~---------------~g~~v~~~~r~~~~--~~~~~~~~~~~---------- 53 (249)
T PRK09135 5 SAKVALITGGARRIGAAI----ARTLHA---------------AGYRVAIHYHRSAA--EADALAAELNA---------- 53 (249)
T ss_pred CCCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEcCCCHH--HHHHHHHHHHh----------
Confidence 357899999555444433 222321 25688888875321 11112111100
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
.....+.++.+|+++. +++..+++ .+|+|||+|+.... .+..+..+++|+.|+.+++++
T Consensus 54 -~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~ 126 (249)
T PRK09135 54 -LRPGSAAALQADLLDP------DALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQA 126 (249)
T ss_pred -hcCCceEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHH
Confidence 0113578899999987 66666655 47999999986321 234567889999999999999
Q ss_pred HHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 319 AKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 319 a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
+... +.-..++++|+... . ... +..+.|+.||..+|.++.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~--~------~~~------------------------------~~~~~Y~~sK~~~~~~~~ 168 (249)
T PRK09135 127 AAPQLRKQRGAIVNITDIHA--E------RPL------------------------------KGYPVYCAAKAALEMLTR 168 (249)
T ss_pred HHHHHhhCCeEEEEEeChhh--c------CCC------------------------------CCchhHHHHHHHHHHHHH
Confidence 8642 11234444443221 1 000 111689999999999998
Q ss_pred Hc----CCCCcEEEecCCeEEeccC
Q psy16243 397 RG----GAGMPVAMVRPSIVIATNK 417 (782)
Q Consensus 397 ~~----~~glp~~IvRp~~v~G~~~ 417 (782)
.+ ..+++++++||+.++||..
T Consensus 169 ~l~~~~~~~i~~~~v~pg~~~~~~~ 193 (249)
T PRK09135 169 SLALELAPEVRVNAVAPGAILWPED 193 (249)
T ss_pred HHHHHHCCCCeEEEEEeccccCccc
Confidence 76 2479999999999998753
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.6e-10 Score=116.16 Aligned_cols=116 Identities=20% Similarity=0.197 Sum_probs=88.0
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAK-- 320 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~-- 320 (782)
.++.++.+|++++ +++..+++ ++|+|||+|+.... .+.+...+++|+.|+.++++.+.
T Consensus 56 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (249)
T PRK12825 56 RRAQAVQADVTDK------AALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPP 129 (249)
T ss_pred CceEEEECCcCCH------HHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4688999999987 66666554 57999999996432 23345678899999999998873
Q ss_pred --HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 321 --EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 321 --~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
+. +.++||++||...+.... ....|+.+|...|.++..+
T Consensus 130 ~~~~-~~~~~i~~SS~~~~~~~~--------------------------------------~~~~y~~sK~~~~~~~~~~ 170 (249)
T PRK12825 130 MRKQ-RGGRIVNISSVAGLPGWP--------------------------------------GRSNYAAAKAGLVGLTKAL 170 (249)
T ss_pred HHhc-CCCEEEEECccccCCCCC--------------------------------------CchHHHHHHHHHHHHHHHH
Confidence 43 578999999987653210 0157999999999888655
Q ss_pred -----CCCCcEEEecCCeEEeccC
Q psy16243 399 -----GAGMPVAMVRPSIVIATNK 417 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~~~ 417 (782)
..+++++++||+.++++..
T Consensus 171 ~~~~~~~~i~~~~i~pg~~~~~~~ 194 (249)
T PRK12825 171 ARELAEYGITVNMVAPGDIDTDMK 194 (249)
T ss_pred HHHHhhcCeEEEEEEECCccCCcc
Confidence 2489999999999998643
|
|
| >PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.1e-11 Score=107.63 Aligned_cols=82 Identities=29% Similarity=0.465 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhccccccccccccchHHHHhhcCHHHHhhhcccccc
Q psy16243 568 IHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQ 647 (782)
Q Consensus 568 ~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~~~~~f~~~~w~f~~~n~~~L~~~l~~~Dr~~F~fd~~~ 647 (782)
.|.+|++++|.+....|.++..+ ++.+...+....++- |++++|.|+++|+.+|++.|+|+||++||||+++
T Consensus 2 ~h~lPA~~~D~~~~l~g~kp~~~-----k~~~ki~~~~~~~~~---F~~~eW~F~~~n~~~L~~~l~~~D~~~F~fD~~~ 73 (94)
T PF03015_consen 2 FHFLPAYLLDLILRLFGQKPRMV-----KIYRKIRKALEVLEY---FTTNEWIFDNDNTRRLWERLSPEDREIFNFDIRS 73 (94)
T ss_pred cchHHHHHHHHHHHHhCCChHHH-----HHHHHHHHHHHHHHH---HHhCceeecchHHHHHHHhCchhcCceecCCCCC
Confidence 48999999999999999888776 355666788889999 9999999999999999999999999999999999
Q ss_pred ccccccccch
Q psy16243 648 LGSFEVHSTL 657 (782)
Q Consensus 648 ~~~~~~~~~~ 657 (782)
++|.+|-...
T Consensus 74 idW~~Y~~~~ 83 (94)
T PF03015_consen 74 IDWEEYFRNY 83 (94)
T ss_pred CCHHHHHHHH
Confidence 9999995554
|
The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process |
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.4e-10 Score=120.70 Aligned_cols=166 Identities=13% Similarity=0.145 Sum_probs=108.2
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||.++..|..+ .+.|.. .+.+|+++.|..... .+...+....
T Consensus 3 ~k~~lItGasg~iG~~l----a~~l~~---------------~G~~V~~~~r~~~~~--~~~~~~~~~~----------- 50 (280)
T PRK06914 3 KKIAIVTGASSGFGLLT----TLELAK---------------KGYLVIATMRNPEKQ--ENLLSQATQL----------- 50 (280)
T ss_pred CCEEEEECCCchHHHHH----HHHHHh---------------CCCEEEEEeCCHHHH--HHHHHHHHhc-----------
Confidence 57899999655444433 233322 256788888864321 1111111110
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHH---H---hcCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH-
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQT---L---VDNIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA- 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~---l---~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a- 319 (782)
....+++++.+|++++ ++++. + ...+|+|||+|+.... .+.+.+.+++|+.|+.++++.+
T Consensus 51 ~~~~~~~~~~~D~~d~------~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (280)
T PRK06914 51 NLQQNIKVQQLDVTDQ------NSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVL 124 (280)
T ss_pred CCCCceeEEecCCCCH------HHHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 0124788999999997 55543 2 2346999999986432 1344567889999999888885
Q ss_pred ---HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 320 ---KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 320 ---~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
++. +..++|++||........ ..+.|+.||...|.+++
T Consensus 125 ~~~~~~-~~~~iv~vsS~~~~~~~~--------------------------------------~~~~Y~~sK~~~~~~~~ 165 (280)
T PRK06914 125 PYMRKQ-KSGKIINISSISGRVGFP--------------------------------------GLSPYVSSKYALEGFSE 165 (280)
T ss_pred HHHHhc-CCCEEEEECcccccCCCC--------------------------------------CCchhHHhHHHHHHHHH
Confidence 433 567899999975432110 01679999999999887
Q ss_pred Hc-----CCCCcEEEecCCeEEecc
Q psy16243 397 RG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.. ..|++++++|||.+.++.
T Consensus 166 ~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (280)
T PRK06914 166 SLRLELKPFGIDVALIEPGSYNTNI 190 (280)
T ss_pred HHHHHhhhhCCEEEEEecCCcccch
Confidence 65 348999999999998763
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.5e-09 Score=115.54 Aligned_cols=113 Identities=20% Similarity=0.302 Sum_probs=83.9
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++.++.+|++++ +++..+++ .+|+|||+|+..... +.+...+++|+.|+.++++.+...
T Consensus 60 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~ 133 (274)
T PRK07775 60 EAVAFPLDVTDP------DSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGM 133 (274)
T ss_pred eEEEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 578889999988 66666554 469999999875321 234566889999999999886431
Q ss_pred --cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC-
Q psy16243 323 --KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG- 399 (782)
Q Consensus 323 --~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~- 399 (782)
.+..+||++||...+.... ....|+.+|+..|.++..+.
T Consensus 134 ~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~l~~~~~~ 175 (274)
T PRK07775 134 IERRRGDLIFVGSDVALRQRP--------------------------------------HMGAYGAAKAGLEAMVTNLQM 175 (274)
T ss_pred HhcCCceEEEECChHhcCCCC--------------------------------------CcchHHHHHHHHHHHHHHHHH
Confidence 2456899999986553210 11579999999999998762
Q ss_pred ----CCCcEEEecCCeEEe
Q psy16243 400 ----AGMPVAMVRPSIVIA 414 (782)
Q Consensus 400 ----~glp~~IvRp~~v~G 414 (782)
.|++++++|||.+.+
T Consensus 176 ~~~~~gi~v~~v~pG~~~t 194 (274)
T PRK07775 176 ELEGTGVRASIVHPGPTLT 194 (274)
T ss_pred HhcccCeEEEEEeCCcccC
Confidence 489999999987754
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.8e-10 Score=115.60 Aligned_cols=116 Identities=16% Similarity=0.187 Sum_probs=86.1
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALL 316 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Ll 316 (782)
.++.++.+|++++ +++.++++ ++|+|||+|+..... +.+...+++|+.|+.+++
T Consensus 56 ~~~~~~~~D~~d~------~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 129 (254)
T PRK12746 56 GKAFLIEADLNSI------DGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLI 129 (254)
T ss_pred CcEEEEEcCcCCH------HHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 3678899999997 66666554 489999999874321 223567789999999999
Q ss_pred HHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 317 EMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 317 e~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+.+... ....++|++||..++.... ....|+.||...|.++
T Consensus 130 ~~~~~~~~~~~~~v~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~ 171 (254)
T PRK12746 130 QQTLPLLRAEGRVINISSAEVRLGFT--------------------------------------GSIAYGLSKGALNTMT 171 (254)
T ss_pred HHHHHHhhcCCEEEEECCHHhcCCCC--------------------------------------CCcchHhhHHHHHHHH
Confidence 997653 2345899999987653210 0167999999999987
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.. ..++++++++||.+.++.
T Consensus 172 ~~~~~~~~~~~i~v~~v~pg~~~t~~ 197 (254)
T PRK12746 172 LPLAKHLGERGITVNTIMPGYTKTDI 197 (254)
T ss_pred HHHHHHHhhcCcEEEEEEECCccCcc
Confidence 655 247999999999988753
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.4e-09 Score=114.27 Aligned_cols=231 Identities=16% Similarity=0.092 Sum_probs=144.5
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+..|..+ .+.|.+ .+.+|+++.|... ...+...++.
T Consensus 2 ~k~ilItGat~~iG~~l----a~~L~~---------------~g~~v~~~~r~~~--~~~~~~~~~~------------- 47 (257)
T PRK07074 2 KRTALVTGAAGGIGQAL----ARRFLA---------------AGDRVLALDIDAA--ALAAFADALG------------- 47 (257)
T ss_pred CCEEEEECCcchHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHhc-------------
Confidence 57899999655444333 223321 2567888887532 1111111110
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a 319 (782)
..++.++.+|++++ +++..+++ ++|+|||+|+..... +.....+.+|+.|+.++++.+
T Consensus 48 --~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 119 (257)
T PRK07074 48 --DARFVPVACDLTDA------ASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAV 119 (257)
T ss_pred --CCceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 13678899999987 66665555 379999999864321 223455779999999999887
Q ss_pred HHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 320 KEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 320 ~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
... .+..++|++||........ ...|+.+|...|.+++
T Consensus 120 ~~~~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~y~~sK~a~~~~~~ 160 (257)
T PRK07074 120 LEGMLKRSRGAVVNIGSVNGMAALG---------------------------------------HPAYSAAKAGLIHYTK 160 (257)
T ss_pred HHHHHHcCCeEEEEEcchhhcCCCC---------------------------------------CcccHHHHHHHHHHHH
Confidence 321 2457899999965321100 0369999999998888
Q ss_pred HcC-----CCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCc
Q psy16243 397 RGG-----AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPEL 471 (782)
Q Consensus 397 ~~~-----~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 471 (782)
.+. .++++.++|||.+.++.... .......+...... ...
T Consensus 161 ~~a~~~~~~gi~v~~v~pg~v~t~~~~~--------------------------~~~~~~~~~~~~~~---------~~~ 205 (257)
T PRK07074 161 LLAVEYGRFGIRANAVAPGTVKTQAWEA--------------------------RVAANPQVFEELKK---------WYP 205 (257)
T ss_pred HHHHHHhHhCeEEEEEEeCcCCcchhhc--------------------------ccccChHHHHHHHh---------cCC
Confidence 762 37999999999887642110 00000011111111 112
Q ss_pred cccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHh
Q psy16243 472 VADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEK 544 (782)
Q Consensus 472 ~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~ 544 (782)
..++++++|++++++.++..... ...+.++++.++ .....+|+++.+..
T Consensus 206 ~~~~~~~~d~a~~~~~l~~~~~~----------------------~~~g~~~~~~~g--~~~~~~~~~~~~~~ 254 (257)
T PRK07074 206 LQDFATPDDVANAVLFLASPAAR----------------------AITGVCLPVDGG--LTAGNREMARTLTL 254 (257)
T ss_pred CCCCCCHHHHHHHHHHHcCchhc----------------------CcCCcEEEeCCC--cCcCChhhhhhhcc
Confidence 35789999999999998854211 124678888877 67888888887654
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.7e-10 Score=117.40 Aligned_cols=163 Identities=15% Similarity=0.192 Sum_probs=108.6
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... .+.+.+..
T Consensus 5 ~~~~vlItGas~~iG~~i----a~~l~~---------------~G~~v~~~~r~~~~---~~~~~~~~------------ 50 (257)
T PRK07067 5 QGKVALLTGAASGIGEAV----AERYLA---------------EGARVVIADIKPAR---ARLAALEI------------ 50 (257)
T ss_pred CCCEEEEeCCCchHHHHH----HHHHHH---------------cCCEEEEEcCCHHH---HHHHHHHh------------
Confidence 468999999655444333 233322 25678888775321 11211110
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
..++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.+++++
T Consensus 51 ---~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 121 (257)
T PRK07067 51 ---GPAAIAVSLDVTRQ------DSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQA 121 (257)
T ss_pred ---CCceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHH
Confidence 12578899999988 66666555 47999999987532 134567889999999999999
Q ss_pred HHHc----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 319 AKEM----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 319 a~~~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+... +.-.++|++||....... + ....|+.||...+.+
T Consensus 122 ~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------------------~-----~~~~Y~~sK~a~~~~ 163 (257)
T PRK07067 122 VARHMVEQGRGGKIINMASQAGRRGE---------------------------------A-----LVSHYCATKAAVISY 163 (257)
T ss_pred HHHHHHhcCCCcEEEEeCCHHhCCCC---------------------------------C-----CCchhhhhHHHHHHH
Confidence 8542 112479999996432110 0 016799999999888
Q ss_pred HHHc-----CCCCcEEEecCCeEEecc
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
++.. ..|+++.++|||.+.++.
T Consensus 164 ~~~la~e~~~~gi~v~~i~pg~v~t~~ 190 (257)
T PRK07067 164 TQSAALALIRHGINVNAIAPGVVDTPM 190 (257)
T ss_pred HHHHHHHhcccCeEEEEEeeCcccchh
Confidence 8765 358999999999998863
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.7e-09 Score=113.49 Aligned_cols=168 Identities=22% Similarity=0.297 Sum_probs=109.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|.++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++...
T Consensus 5 ~~~k~vlItGasg~IG~~l----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~~--------- 54 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGV----AAGLVA---------------AGAAVMIVGRNPDK--LAAAAEEIEAL--------- 54 (276)
T ss_pred CCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCeEEEEeCCHHH--HHHHHHHHHhc---------
Confidence 3468999999655444433 233322 25678888876321 11222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Ll 316 (782)
....++.++.+|++++ +++..+++ .+|+|||+|+.... .+.+...+++|+.|+..++
T Consensus 55 --~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 126 (276)
T PRK05875 55 --KGAGAVRYEPADVTDE------DQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVL 126 (276)
T ss_pred --cCCCceEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence 0024688899999987 66666655 57999999985421 1234567889999999999
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+.+. .+-.+++++||.++.... +..+.|+.+|...|.
T Consensus 127 ~~~~~~~~~~~~g~iv~~sS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~ 168 (276)
T PRK05875 127 KHAARELVRGGGGSFVGISSIAASNTH--------------------------------------RWFGAYGVTKSAVDH 168 (276)
T ss_pred HHHHHHHHhcCCcEEEEEechhhcCCC--------------------------------------CCCcchHHHHHHHHH
Confidence 876442 133589999998754221 011689999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+++.+ ..++.++++||+.+.++
T Consensus 169 ~~~~~~~~~~~~~i~v~~i~Pg~v~t~ 195 (276)
T PRK05875 169 LMKLAADELGPSWVRVNSIRPGLIRTD 195 (276)
T ss_pred HHHHHHHHhcccCeEEEEEecCccCCc
Confidence 99876 24789999999988654
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.5e-09 Score=113.55 Aligned_cols=111 Identities=19% Similarity=0.197 Sum_probs=83.4
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------h---hhHHHHHHhhHHHHHHHHHHHH
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------D---AHLKVAVSINLRATKALLEMAK 320 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~---~~~~~~~~~Nv~gt~~Lle~a~ 320 (782)
++..+.+|++++ ++++.+++ .+|+|||+|+.... . +.+++.+++|+.|+.++++++.
T Consensus 56 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 129 (250)
T PRK07774 56 TAIAVQVDVSDP------DSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVY 129 (250)
T ss_pred cEEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 567889999987 56555444 57999999996421 1 2344678899999999999976
Q ss_pred Hc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 321 EM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 321 ~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
.. .+..++|++||..++.. .+.|+.||+..|.+++.
T Consensus 130 ~~~~~~~~~~iv~~sS~~~~~~-----------------------------------------~~~Y~~sK~a~~~~~~~ 168 (250)
T PRK07774 130 KHMAKRGGGAIVNQSSTAAWLY-----------------------------------------SNFYGLAKVGLNGLTQQ 168 (250)
T ss_pred HHHHHhCCcEEEEEecccccCC-----------------------------------------ccccHHHHHHHHHHHHH
Confidence 53 13468999999876431 16799999999998877
Q ss_pred c-----CCCCcEEEecCCeEEec
Q psy16243 398 G-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G~ 415 (782)
. ..++++.+++||.+..+
T Consensus 169 l~~~~~~~~i~v~~v~pg~~~t~ 191 (250)
T PRK07774 169 LARELGGMNIRVNAIAPGPIDTE 191 (250)
T ss_pred HHHHhCccCeEEEEEecCcccCc
Confidence 6 24799999999877654
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.7e-10 Score=117.26 Aligned_cols=171 Identities=19% Similarity=0.150 Sum_probs=107.4
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..++.|..+ .+.|.. .+.+|+++.|.... ..+.+.+.++.
T Consensus 5 ~~k~vlItGasggiG~~l----~~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~l~~---------- 53 (248)
T PRK07806 5 PGKTALVTGSSRGIGADT----AKILAG---------------AGAHVVVNYRQKAP--RANKVVAEIEA---------- 53 (248)
T ss_pred CCcEEEEECCCCcHHHHH----HHHHHH---------------CCCEEEEEeCCchH--hHHHHHHHHHh----------
Confidence 468999999655555444 223321 25678887775321 11222111110
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-hhhHHHHHHhhHHHHHHHHHHHHHc-c
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-DAHLKVAVSINLRATKALLEMAKEM-K 323 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~Lle~a~~~-~ 323 (782)
...++.++.+|++++ +++..+++ .+|+|||+|+.... .......+++|+.|+.++++.+... .
T Consensus 54 --~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~ 125 (248)
T PRK07806 54 --AGGRASAVGADLTDE------ESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMP 125 (248)
T ss_pred --cCCceEEEEcCCCCH------HHHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhcc
Confidence 013578899999987 66665554 57999999985321 1234457789999999999998764 2
Q ss_pred CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----
Q psy16243 324 QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG----- 398 (782)
Q Consensus 324 ~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~----- 398 (782)
...++|++||........ .+. .+ ....|+.||..+|.+++.+
T Consensus 126 ~~~~iv~isS~~~~~~~~--~~~--------------------------~~-----~~~~Y~~sK~a~e~~~~~l~~~~~ 172 (248)
T PRK07806 126 AGSRVVFVTSHQAHFIPT--VKT--------------------------MP-----EYEPVARSKRAGEDALRALRPELA 172 (248)
T ss_pred CCceEEEEeCchhhcCcc--ccC--------------------------Cc-----cccHHHHHHHHHHHHHHHHHHHhh
Confidence 235899999964321100 000 00 0157999999999998876
Q ss_pred CCCCcEEEecCCeEEec
Q psy16243 399 GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ~~glp~~IvRp~~v~G~ 415 (782)
..++++.+++|+.+-++
T Consensus 173 ~~~i~v~~v~pg~~~~~ 189 (248)
T PRK07806 173 EKGIGFVVVSGDMIEGT 189 (248)
T ss_pred ccCeEEEEeCCccccCc
Confidence 35788888888766553
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.4e-09 Score=114.05 Aligned_cols=116 Identities=18% Similarity=0.217 Sum_probs=86.3
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc---------hhhHHHHHHhhHHHHHHHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF---------DAHLKVAVSINLRATKALLEMAK 320 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~Lle~a~ 320 (782)
.++.++.+|++++ +++.++++ .+|+|||+|+.... .+.+++.+++|+.|+.++++.+.
T Consensus 52 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 125 (256)
T PRK12745 52 VEVIFFPADVADL------SAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVA 125 (256)
T ss_pred CceEEEEecCCCH------HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHH
Confidence 3688999999997 66655544 57999999986421 14456788999999999988864
Q ss_pred Hc----cC-----CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 321 EM----KQ-----LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 321 ~~----~~-----~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
.. ++ ..++|++||..+..... ....|+.+|...
T Consensus 126 ~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~ 167 (256)
T PRK12745 126 KRMLAQPEPEELPHRSIVFVSSVNAIMVSP--------------------------------------NRGEYCISKAGL 167 (256)
T ss_pred HHHHhccCcCCCCCcEEEEECChhhccCCC--------------------------------------CCcccHHHHHHH
Confidence 32 11 56799999976542210 116799999999
Q ss_pred HHHHHHcC-----CCCcEEEecCCeEEecc
Q psy16243 392 EDMVRRGG-----AGMPVAMVRPSIVIATN 416 (782)
Q Consensus 392 E~ll~~~~-----~glp~~IvRp~~v~G~~ 416 (782)
|.+++.+. .|++++++|||.+.++.
T Consensus 168 ~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~ 197 (256)
T PRK12745 168 SMAAQLFAARLAEEGIGVYEVRPGLIKTDM 197 (256)
T ss_pred HHHHHHHHHHHHHhCCEEEEEecCCCcCcc
Confidence 99888762 58999999999888753
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=3e-09 Score=114.74 Aligned_cols=115 Identities=21% Similarity=0.191 Sum_probs=87.0
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----c----hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----F----DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
++.++.+|++++ ++++++++ .+|++||+|+... + .+.++..+++|+.|+..+++.+...
T Consensus 107 ~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 180 (300)
T PRK06128 107 KAVALPGDLKDE------AFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPH 180 (300)
T ss_pred eEEEEecCCCCH------HHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 677899999987 66665554 5799999998632 1 1345678999999999999998643
Q ss_pred -cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---
Q psy16243 323 -KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--- 398 (782)
Q Consensus 323 -~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--- 398 (782)
..-.++|++||..++.... . ...|+.||...+.+++..
T Consensus 181 ~~~~~~iv~~sS~~~~~~~~---------------------------------~-----~~~Y~asK~a~~~~~~~la~e 222 (300)
T PRK06128 181 LPPGASIINTGSIQSYQPSP---------------------------------T-----LLDYASTKAAIVAFTKALAKQ 222 (300)
T ss_pred cCcCCEEEEECCccccCCCC---------------------------------C-----chhHHHHHHHHHHHHHHHHHH
Confidence 2235899999987654211 0 156999999999998766
Q ss_pred --CCCCcEEEecCCeEEecc
Q psy16243 399 --GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 399 --~~glp~~IvRp~~v~G~~ 416 (782)
..|+++.+++||.+.++.
T Consensus 223 l~~~gI~v~~v~PG~i~t~~ 242 (300)
T PRK06128 223 VAEKGIRVNAVAPGPVWTPL 242 (300)
T ss_pred hhhcCcEEEEEEECcCcCCC
Confidence 258999999999998764
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.9e-09 Score=109.70 Aligned_cols=165 Identities=16% Similarity=0.163 Sum_probs=108.7
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+++++|||..+..|..+ .+.|.. .+.+|+++.|.... ......+..
T Consensus 5 ~~~ilItGasg~iG~~l----~~~l~~---------------~g~~v~~~~r~~~~--~~~~~~~~~------------- 50 (246)
T PRK05653 5 GKTALVTGASRGIGRAI----ALRLAA---------------DGAKVVIYDSNEEA--AEALAAELR------------- 50 (246)
T ss_pred CCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCChhH--HHHHHHHHH-------------
Confidence 57899999655555443 233322 25668888886431 111111111
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a 319 (782)
....++.++.+|++++ +++..+++ .+|+|||+||..... +.+.+.++.|+.|+.++++.+
T Consensus 51 ~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 124 (246)
T PRK05653 51 AAGGEARVLVFDVSDE------AAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAA 124 (246)
T ss_pred hcCCceEEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 1123688899999987 66655554 359999999875432 234567889999999999887
Q ss_pred HH---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 320 KE---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 320 ~~---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
.. ..+.+++|++||....... .....|+.+|...|.++.
T Consensus 125 ~~~l~~~~~~~ii~~ss~~~~~~~--------------------------------------~~~~~y~~sk~~~~~~~~ 166 (246)
T PRK05653 125 LPPMIKARYGRIVNISSVSGVTGN--------------------------------------PGQTNYSAAKAGVIGFTK 166 (246)
T ss_pred HHHHHhcCCcEEEEECcHHhccCC--------------------------------------CCCcHhHhHHHHHHHHHH
Confidence 42 1256899999997532110 011579999998888876
Q ss_pred Hc-----CCCCcEEEecCCeEEecc
Q psy16243 397 RG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.. ..++.++++||+.+.++.
T Consensus 167 ~l~~~~~~~~i~~~~i~pg~~~~~~ 191 (246)
T PRK05653 167 ALALELASRGITVNAVAPGFIDTDM 191 (246)
T ss_pred HHHHHHhhcCeEEEEEEeCCcCCcc
Confidence 65 248999999999998753
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.7e-09 Score=111.41 Aligned_cols=114 Identities=15% Similarity=0.185 Sum_probs=84.8
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++.++.+|++++ +++..++++ +|+|||+|+..... +.+++.+++|+.|+..+++.+...
T Consensus 57 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 130 (247)
T PRK12935 57 DVYAVQADVSKV------EDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYI 130 (247)
T ss_pred eEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 688999999987 666666654 69999999975321 455678899999999999997642
Q ss_pred --cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 323 --KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 323 --~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
.+..++|++||.+..... + ....|+.||...|.++...
T Consensus 131 ~~~~~~~iv~~sS~~~~~~~---------------------------------~-----~~~~Y~~sK~a~~~~~~~l~~ 172 (247)
T PRK12935 131 TEAEEGRIISISSIIGQAGG---------------------------------F-----GQTNYSAAKAGMLGFTKSLAL 172 (247)
T ss_pred HHcCCcEEEEEcchhhcCCC---------------------------------C-----CCcchHHHHHHHHHHHHHHHH
Confidence 234689999997543211 0 0167999999888877655
Q ss_pred ---CCCCcEEEecCCeEEec
Q psy16243 399 ---GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ---~~glp~~IvRp~~v~G~ 415 (782)
..++++++++||.+.++
T Consensus 173 ~~~~~~i~v~~v~pg~v~t~ 192 (247)
T PRK12935 173 ELAKTNVTVNAICPGFIDTE 192 (247)
T ss_pred HHHHcCcEEEEEEeCCCcCh
Confidence 24899999999988653
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.6e-09 Score=109.98 Aligned_cols=162 Identities=19% Similarity=0.174 Sum_probs=105.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ..+...++..
T Consensus 6 ~~~k~vlVtGas~gIG~~l----a~~l~~---------------~G~~v~~~~r~~~---~~~~~~~~~~---------- 53 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGV----ALRAAA---------------EGARVVLVDRSEL---VHEVAAELRA---------- 53 (260)
T ss_pred cCCCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEeCchH---HHHHHHHHHh----------
Confidence 4578999999654444333 233322 1456777777532 1122222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----c----hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----F----DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++...+++ .+|++||+|+... + .+.+...+++|+.|+..++
T Consensus 54 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 124 (260)
T PRK12823 54 ---AGGEALALTADLETY------AGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCC 124 (260)
T ss_pred ---cCCeEEEEEEeCCCH------HHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHH
Confidence 113577899999987 55555544 5799999998431 1 1334567789998887666
Q ss_pred HHH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+.+ ++. +..++|++||...++.. ...|+.||+..|
T Consensus 125 ~~~~~~~~~~-~~g~iv~~sS~~~~~~~----------------------------------------~~~Y~~sK~a~~ 163 (260)
T PRK12823 125 RAVLPHMLAQ-GGGAIVNVSSIATRGIN----------------------------------------RVPYSAAKGGVN 163 (260)
T ss_pred HHHHHHHHhc-CCCeEEEEcCccccCCC----------------------------------------CCccHHHHHHHH
Confidence 554 333 45689999998654310 156999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+++.+ ..++++.+++||.|++|
T Consensus 164 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 191 (260)
T PRK12823 164 ALTASLAFEYAEHGIRVNAVAPGGTEAP 191 (260)
T ss_pred HHHHHHHHHhcccCcEEEEEecCccCCc
Confidence 988765 24899999999999986
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.2e-09 Score=112.24 Aligned_cols=162 Identities=16% Similarity=0.109 Sum_probs=109.7
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... .+.+.+.
T Consensus 4 ~~~vlVtGasggiG~~l----a~~l~~---------------~G~~V~~~~r~~~~---~~~l~~~-------------- 47 (277)
T PRK06180 4 MKTWLITGVSSGFGRAL----AQAALA---------------AGHRVVGTVRSEAA---RADFEAL-------------- 47 (277)
T ss_pred CCEEEEecCCChHHHHH----HHHHHh---------------CcCEEEEEeCCHHH---HHHHHhh--------------
Confidence 57899999655444333 223321 15678888886421 1222111
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a 319 (782)
...++..+.+|++++ +++..+++ .+|+|||+|+..... +.++..+++|+.|+.++++++
T Consensus 48 -~~~~~~~~~~D~~d~------~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~ 120 (277)
T PRK06180 48 -HPDRALARLLDVTDF------DAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAV 120 (277)
T ss_pred -cCCCeeEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 113678889999997 66666555 479999999975431 334567899999999999985
Q ss_pred HH---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 320 KE---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 320 ~~---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
.. ..+..++|++||.......+ ....|+.+|...|.++.
T Consensus 121 ~~~~~~~~~~~iv~iSS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~ 162 (277)
T PRK06180 121 LPGMRARRRGHIVNITSMGGLITMP--------------------------------------GIGYYCGSKFALEGISE 162 (277)
T ss_pred HHHHhccCCCEEEEEecccccCCCC--------------------------------------CcchhHHHHHHHHHHHH
Confidence 32 12457899999976543210 01679999999999887
Q ss_pred Hc-----CCCCcEEEecCCeEEecc
Q psy16243 397 RG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.. ..|++++++|||.+.++.
T Consensus 163 ~la~e~~~~gi~v~~i~Pg~v~t~~ 187 (277)
T PRK06180 163 SLAKEVAPFGIHVTAVEPGSFRTDW 187 (277)
T ss_pred HHHHHhhhhCcEEEEEecCCcccCc
Confidence 65 248999999999998754
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.2e-09 Score=113.06 Aligned_cols=166 Identities=16% Similarity=0.174 Sum_probs=107.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|... +.+|.+..|... ...+..+++..
T Consensus 4 ~~~k~vlVTGas~gIG~al----a~~La~~---------------G~~Vv~~~r~~~--~l~~~~~~l~~---------- 52 (275)
T PRK05876 4 FPGRGAVITGGASGIGLAT----GTEFARR---------------GARVVLGDVDKP--GLRQAVNHLRA---------- 52 (275)
T ss_pred cCCCEEEEeCCCchHHHHH----HHHHHHC---------------CCEEEEEeCCHH--HHHHHHHHHHh----------
Confidence 4578999999655554443 2333321 456777766532 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ +++..+++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 53 ---~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 123 (275)
T PRK05876 53 ---EGFDVHGVMCDVRHR------EEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVE 123 (275)
T ss_pred ---cCCeEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence 113578899999997 67766654 36999999986421 13355678999999999998
Q ss_pred HHHH----ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH---
Q psy16243 318 MAKE----MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV--- 390 (782)
Q Consensus 318 ~a~~----~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~--- 390 (782)
.+.. .+...++|++||...+... +....|+.||..
T Consensus 124 ~~~p~m~~~~~~g~iv~isS~~~~~~~--------------------------------------~~~~~Y~asK~a~~~ 165 (275)
T PRK05876 124 AFLPRLLEQGTGGHVVFTASFAGLVPN--------------------------------------AGLGAYGVAKYGVVG 165 (275)
T ss_pred HHHHHHHhcCCCCEEEEeCChhhccCC--------------------------------------CCCchHHHHHHHHHH
Confidence 8642 2224689999998654321 011679999996
Q ss_pred -HHHHHHHc-CCCCcEEEecCCeEEec
Q psy16243 391 -AEDMVRRG-GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 391 -aE~ll~~~-~~glp~~IvRp~~v~G~ 415 (782)
+|.+..++ ..|+.+++++|+.+.++
T Consensus 166 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 192 (275)
T PRK05876 166 LAETLAREVTADGIGVSVLCPMVVETN 192 (275)
T ss_pred HHHHHHHHhhhcCcEEEEEEeCccccc
Confidence 66665555 45899999999988764
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.5e-09 Score=108.16 Aligned_cols=163 Identities=18% Similarity=0.157 Sum_probs=108.7
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+.++++..
T Consensus 6 ~~k~vlItGatg~iG~~l----a~~l~~---------------~G~~v~~~~r~~~~--~~~~~~~~~~----------- 53 (239)
T PRK12828 6 QGKVVAITGGFGGLGRAT----AAWLAA---------------RGARVALIGRGAAP--LSQTLPGVPA----------- 53 (239)
T ss_pred CCCEEEEECCCCcHhHHH----HHHHHH---------------CCCeEEEEeCChHh--HHHHHHHHhh-----------
Confidence 368999999655555433 233322 15678888885321 1222222211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
..+..+.+|+++. +++..+++ ++|+|+|+|+.... .+.+.+.+++|+.|+.+++++
T Consensus 54 ----~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 123 (239)
T PRK12828 54 ----DALRIGGIDLVDP------QAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKA 123 (239)
T ss_pred ----cCceEEEeecCCH------HHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHH
Confidence 2456677999887 66665554 57999999986432 133456788999999999988
Q ss_pred HHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+.+. .+.+++|++||...+.... .-..|+.+|...+.++
T Consensus 124 ~~~~~~~~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~y~~sk~a~~~~~ 165 (239)
T PRK12828 124 ALPALTASGGGRIVNIGAGAALKAGP--------------------------------------GMGAYAAAKAGVARLT 165 (239)
T ss_pred HHHHHHhcCCCEEEEECchHhccCCC--------------------------------------CcchhHHHHHHHHHHH
Confidence 7431 3578999999987654310 0157999999888887
Q ss_pred HHc-----CCCCcEEEecCCeEEec
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~ 415 (782)
... ..++++.++||+.++++
T Consensus 166 ~~~a~~~~~~~i~~~~i~pg~v~~~ 190 (239)
T PRK12828 166 EALAAELLDRGITVNAVLPSIIDTP 190 (239)
T ss_pred HHHHHHhhhcCeEEEEEecCcccCc
Confidence 655 24899999999999875
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.3e-09 Score=108.84 Aligned_cols=164 Identities=17% Similarity=0.150 Sum_probs=109.4
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+...++.
T Consensus 4 ~~k~~lItG~sg~iG~~l----a~~l~~---------------~G~~v~~~~r~~~~--~~~~~~~~~------------ 50 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRAT----AKLFAR---------------EGARVVVADRDAEA--AERVAAAIA------------ 50 (252)
T ss_pred CCcEEEEeCCCchHHHHH----HHHHHH---------------CCCeEEEecCCHHH--HHHHHHHHh------------
Confidence 478999999554444433 223321 15678888776321 222222111
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++..+.+|++++ ++++++++ .+|+|||+|+.... .+.++..+++|+.|+.++.+.
T Consensus 51 --~~~~~~~~~~D~~~~------~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 122 (252)
T PRK06138 51 --AGGRAFARQGDVGSA------EAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKY 122 (252)
T ss_pred --cCCeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHH
Confidence 013678899999988 66666554 57999999997432 133456788999999877766
Q ss_pred H----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 319 A----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 319 a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+ ++. +.++++++||........ ..+.|+.+|...+.+
T Consensus 123 ~~~~~~~~-~~~~ii~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~ 163 (252)
T PRK06138 123 AIPIMQRQ-GGGSIVNTASQLALAGGR--------------------------------------GRAAYVASKGAIASL 163 (252)
T ss_pred HHHHHHhc-CCeEEEEECChhhccCCC--------------------------------------CccHHHHHHHHHHHH
Confidence 4 333 567999999985432110 016799999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEecc
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+... ..+++++++|||.+.++.
T Consensus 164 ~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (252)
T PRK06138 164 TRAMALDHATDGIRVNAVAPGTIDTPY 190 (252)
T ss_pred HHHHHHHHHhcCeEEEEEEECCccCcc
Confidence 8776 248999999999998764
|
|
| >cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.8e-10 Score=101.25 Aligned_cols=87 Identities=31% Similarity=0.482 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhccccccccccccchHHHHhhcCHHHHhhhcccccc
Q psy16243 568 IHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQRLYTKMTEEDRALFNFDMSQ 647 (782)
Q Consensus 568 ~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~~~~~f~~~~w~f~~~n~~~L~~~l~~~Dr~~F~fd~~~ 647 (782)
.|.+|+++++.+....+.++..+. +.+-..+.....+. |+.++|.|+++|+++|++.|+|+||++|+||++.
T Consensus 2 ~~~lpa~~~d~~~~l~g~~~~~~~-----~~~k~~~~~~~~~~---Ft~~~w~F~~~n~~~L~~~l~~~Dr~~F~fD~~~ 73 (92)
T cd09071 2 LHLLPAYLLDLLLRLLGRKPRLLK-----LYRKIHKLLDLLEY---FTTNEWRFDNDNTRALWERLSEEDRELFNFDIRS 73 (92)
T ss_pred cccchHHHHHHHHHHhCCChHHHH-----HHHHHHHHHHHhhc---cccCeEEeeCcHHHHHHHHCCHHHHHhCCCCCCC
Confidence 378899999999988887776652 44555688999999 9999999999999999999999999999999999
Q ss_pred ccccccccchhhhhhHh
Q psy16243 648 LGSFEVHSTLNTLVSTR 664 (782)
Q Consensus 648 ~~~~~~~~~~~~~~~~~ 664 (782)
++|.+|-... +++.|
T Consensus 74 idW~~Y~~~~--~~G~r 88 (92)
T cd09071 74 IDWDDYFENY--IPGLR 88 (92)
T ss_pred CCHHHHHHHH--HHHHH
Confidence 9999996544 44444
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. |
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.05 E-value=7e-09 Score=108.39 Aligned_cols=166 Identities=17% Similarity=0.126 Sum_probs=110.5
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|... +.+|+++.|.... ..+...++..
T Consensus 2 ~~~~ilItGas~~iG~~l----a~~l~~~---------------g~~v~~~~r~~~~--~~~~~~~~~~----------- 49 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGAT----CRRFAEE---------------GAKVAVFDLNREA--AEKVAADIRA----------- 49 (250)
T ss_pred CCCEEEEeCCCChHHHHH----HHHHHHC---------------CCEEEEecCCHHH--HHHHHHHHHh-----------
Confidence 368999999655555444 2333221 4577877776421 1111111111
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ ++++.+++ .+|+|||+|+.... .+..+..+++|+.|+.++++.
T Consensus 50 --~~~~~~~~~~d~~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 121 (250)
T TIGR03206 50 --KGGNAQAFACDITDR------DSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHA 121 (250)
T ss_pred --cCCcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 123688999999987 66666554 57999999986321 123456789999999999888
Q ss_pred HHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+... .+.+++|++||..++.... ....|+.+|++.|.++
T Consensus 122 ~~~~~~~~~~~~ii~iss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~ 163 (250)
T TIGR03206 122 VLPGMVERGAGRIVNIASDAARVGSS--------------------------------------GEAVYAACKGGLVAFS 163 (250)
T ss_pred HHHHHHhcCCeEEEEECchhhccCCC--------------------------------------CCchHHHHHHHHHHHH
Confidence 6521 2567899999987654311 0157999999888887
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.+ ..++++.++|||.++++.
T Consensus 164 ~~la~~~~~~~i~v~~v~pg~~~~~~ 189 (250)
T TIGR03206 164 KTMAREHARHGITVNVVCPGPTDTAL 189 (250)
T ss_pred HHHHHHHhHhCcEEEEEecCcccchh
Confidence 765 248999999999998763
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.7e-09 Score=112.44 Aligned_cols=166 Identities=20% Similarity=0.244 Sum_probs=108.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..++.++|||..+..|..+ .+.|.. .+.+|.++.|.... .+.+.+..
T Consensus 9 ~~~~~vlItGa~g~iG~~~----a~~L~~---------------~g~~V~~~~r~~~~---~~~~~~~~----------- 55 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAI----AEAFAE---------------AGARVHVCDVSEAA---LAATAARL----------- 55 (264)
T ss_pred cCCCEEEEeCCCCcHHHHH----HHHHHH---------------CCCEEEEEeCCHHH---HHHHHHHH-----------
Confidence 3478999999654444333 233322 25678888886431 12221111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Ll 316 (782)
+. .++.++.+|++++ +++..+++ ++|+|||+|+.... .+...+.+++|+.|+.+++
T Consensus 56 -~~--~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 126 (264)
T PRK12829 56 -PG--AKVTATVADVADP------AQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFA 126 (264)
T ss_pred -hc--CceEEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence 11 1678899999987 66655543 67999999997611 1345678899999999999
Q ss_pred HHHHHc---cCC-ceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMAKEM---KQL-KSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a~~~---~~~-~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+.+... .+. ++++++||.+..... +. ...|+.+|...|
T Consensus 127 ~~~~~~~~~~~~~~~vv~~ss~~~~~~~---------------------------------~~-----~~~y~~~K~a~~ 168 (264)
T PRK12829 127 RAAVPLLKASGHGGVIIALSSVAGRLGY---------------------------------PG-----RTPYAASKWAVV 168 (264)
T ss_pred HHHHHHHHhCCCCeEEEEecccccccCC---------------------------------CC-----CchhHHHHHHHH
Confidence 886321 233 668888876432110 00 146999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEeccC
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIATNK 417 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~~~ 417 (782)
.++... ..+++++++|||.++|+..
T Consensus 169 ~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~ 198 (264)
T PRK12829 169 GLVKSLAIELGPLGIRVNAILPGIVRGPRM 198 (264)
T ss_pred HHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence 988776 2489999999999998753
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.2e-09 Score=109.51 Aligned_cols=114 Identities=13% Similarity=0.137 Sum_probs=82.5
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++..+.+|++++ +++..+++ .+|+|||+||.... .+.+++.+++|+.|+..+++.+.+.
T Consensus 57 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 130 (252)
T PRK06077 57 EGIGVLADVSTR------EGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEM 130 (252)
T ss_pred eeEEEEeccCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHh
Confidence 567888999987 55555544 57999999986322 1223567899999999999987653
Q ss_pred cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----
Q psy16243 323 KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG---- 398 (782)
Q Consensus 323 ~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~---- 398 (782)
+...+||++||...+.... ..+.|+.||...|.++..+
T Consensus 131 ~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~~~~~~~~~l~~~~ 172 (252)
T PRK06077 131 REGGAIVNIASVAGIRPAY--------------------------------------GLSIYGAMKAAVINLTKYLALEL 172 (252)
T ss_pred hcCcEEEEEcchhccCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHH
Confidence 2235899999987653210 1168999999999988876
Q ss_pred CCCCcEEEecCCeEEec
Q psy16243 399 GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ~~glp~~IvRp~~v~G~ 415 (782)
..++.+.+++||.+.++
T Consensus 173 ~~~i~v~~v~Pg~i~t~ 189 (252)
T PRK06077 173 APKIRVNAIAPGFVKTK 189 (252)
T ss_pred hcCCEEEEEeeCCccCh
Confidence 23788888888888764
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.6e-09 Score=112.42 Aligned_cols=113 Identities=8% Similarity=0.067 Sum_probs=81.7
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++.++.+|++++ +++..+++ .+|+|||+|+.... .+.++..+++|+.|+..+++.+...
T Consensus 54 ~~~~~~~D~~~~------~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 127 (259)
T PRK12384 54 MAYGFGADATSE------QSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLM 127 (259)
T ss_pred eeEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 588999999987 56555544 46999999986431 1345567899999998888776442
Q ss_pred --cC-CceEEEEeccee-ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 323 --KQ-LKSFVHVSTAYS-NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 323 --~~-~~~fV~vST~~v-~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
.+ -.++|++||... ++.. ....|+.||++.+.+++.+
T Consensus 128 ~~~~~~~~iv~~ss~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~l~~~l 168 (259)
T PRK12384 128 IRDGIQGRIIQINSKSGKVGSK---------------------------------------HNSGYSAAKFGGVGLTQSL 168 (259)
T ss_pred HhCCCCcEEEEecCcccccCCC---------------------------------------CCchhHHHHHHHHHHHHHH
Confidence 23 358999998642 2210 0157999999988887665
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..|+++.++|||.++++
T Consensus 169 a~e~~~~gi~v~~v~pg~~~~~ 190 (259)
T PRK12384 169 ALDLAEYGITVHSLMLGNLLKS 190 (259)
T ss_pred HHHHHHcCcEEEEEecCCcccc
Confidence 35899999999988764
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.8e-09 Score=109.69 Aligned_cols=114 Identities=19% Similarity=0.133 Sum_probs=84.3
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++.++.+|++++ +++..+++ .+|+|||+|+..... +.....+++|+.|+..+++.+...
T Consensus 55 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 128 (250)
T PRK08063 55 KALAVKANVGDV------EKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLM 128 (250)
T ss_pred eEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 678899999988 66666655 479999999864321 233456789999999999887642
Q ss_pred --cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 323 --KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 323 --~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
.+.++||++||....... + ....|+.||+..|.+++..
T Consensus 129 ~~~~~g~iv~~sS~~~~~~~---------------------------------~-----~~~~y~~sK~a~~~~~~~~~~ 170 (250)
T PRK08063 129 EKVGGGKIISLSSLGSIRYL---------------------------------E-----NYTTVGVSKAALEALTRYLAV 170 (250)
T ss_pred HhcCCeEEEEEcchhhccCC---------------------------------C-----CccHHHHHHHHHHHHHHHHHH
Confidence 245699999997543210 0 0167999999999998775
Q ss_pred ---CCCCcEEEecCCeEEec
Q psy16243 399 ---GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ---~~glp~~IvRp~~v~G~ 415 (782)
..++++.+++|+.+..+
T Consensus 171 ~~~~~~i~v~~i~pg~v~t~ 190 (250)
T PRK08063 171 ELAPKGIAVNAVSGGAVDTD 190 (250)
T ss_pred HHhHhCeEEEeEecCcccCc
Confidence 25899999999998754
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1e-08 Score=107.88 Aligned_cols=166 Identities=18% Similarity=0.154 Sum_probs=112.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.++.++.|..... +..+++..
T Consensus 5 l~~~~ilItGasggiG~~l----a~~l~~---------------~G~~v~~~~r~~~~~---~~~~~~~~---------- 52 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAI----SLRLAE---------------EGAIPVIFGRSAPDD---EFAEELRA---------- 52 (258)
T ss_pred cCCCEEEEeCCCChHHHHH----HHHHHH---------------cCCcEEEEcCChhhH---HHHHHHHh----------
Confidence 4478999999655555444 233322 145677777764322 22222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC---ch---hhHHHHHHhhHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR---FD---AHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~---f~---~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ +++..+++ .+|+|||+|+... +. +.+++.+++|+.|+.++.+.
T Consensus 53 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 123 (258)
T PRK08628 53 ---LQPRAEFVQVDLTDD------AQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHY 123 (258)
T ss_pred ---cCCceEEEEccCCCH------HHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence 123678899999987 66666554 5799999998532 11 44567888999999999888
Q ss_pred HHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 319 AKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 319 a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
+... .+..++|++||....... +....|+.||...|.+++
T Consensus 124 ~~~~~~~~~~~iv~~ss~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~ 165 (258)
T PRK08628 124 CLPHLKASRGAIVNISSKTALTGQ--------------------------------------GGTSGYAAAKGAQLALTR 165 (258)
T ss_pred HHHHhhccCcEEEEECCHHhccCC--------------------------------------CCCchhHHHHHHHHHHHH
Confidence 7532 133689999997653211 011679999999999998
Q ss_pred Hc-----CCCCcEEEecCCeEEecc
Q psy16243 397 RG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.. ..++.+..++||.+.++.
T Consensus 166 ~l~~e~~~~~i~v~~v~pg~v~t~~ 190 (258)
T PRK08628 166 EWAVALAKDGVRVNAVIPAEVMTPL 190 (258)
T ss_pred HHHHHHhhcCeEEEEEecCccCCHH
Confidence 76 248999999999999863
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.6e-09 Score=111.72 Aligned_cols=148 Identities=15% Similarity=0.159 Sum_probs=96.0
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..++.|..+ .+.|.. .+.+|+++.|... ...+...++..
T Consensus 5 ~~k~vlVtGasggIG~~l----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~~~----------- 52 (287)
T PRK06194 5 AGKVAVITGAASGFGLAF----ARIGAA---------------LGMKLVLADVQQD--ALDRAVAELRA----------- 52 (287)
T ss_pred CCCEEEEeCCccHHHHHH----HHHHHH---------------CCCEEEEEeCChH--HHHHHHHHHHh-----------
Confidence 368899999655544443 233322 2567787777532 12222222211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ ++++++++ .+|+|||+||..... +.++..+++|+.|+.+++++
T Consensus 53 --~~~~~~~~~~D~~d~------~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 124 (287)
T PRK06194 53 --QGAEVLGVRTDVSDA------AQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRA 124 (287)
T ss_pred --cCCeEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHH
Confidence 113688899999987 77777665 479999999985421 33456789999999997777
Q ss_pred H----HHccC-----CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHH
Q psy16243 319 A----KEMKQ-----LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQ 389 (782)
Q Consensus 319 a----~~~~~-----~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~ 389 (782)
+ .+... ..++|++||.+.+.... ..+.|+.||+
T Consensus 125 ~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~ 166 (287)
T PRK06194 125 FTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP--------------------------------------AMGIYNVSKH 166 (287)
T ss_pred HHHHHHhcCCCCCCCCeEEEEeCChhhccCCC--------------------------------------CCcchHHHHH
Confidence 3 33322 15899999987654310 0167999999
Q ss_pred HHHHHHHHc
Q psy16243 390 VAEDMVRRG 398 (782)
Q Consensus 390 ~aE~ll~~~ 398 (782)
..|.++..+
T Consensus 167 a~~~~~~~l 175 (287)
T PRK06194 167 AVVSLTETL 175 (287)
T ss_pred HHHHHHHHH
Confidence 999998876
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=5.8e-09 Score=109.56 Aligned_cols=167 Identities=14% Similarity=0.138 Sum_probs=111.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.+ .+.+|+++.|... ...+...++.+
T Consensus 8 ~~~k~vlItGa~g~iG~~i----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~i~~---------- 56 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYAL----AEGLAQ---------------AGAEVILNGRDPA--KLAAAAESLKG---------- 56 (255)
T ss_pred CCCCEEEEECCcchHHHHH----HHHHHH---------------cCCEEEEEeCCHH--HHHHHHHHHHh----------
Confidence 5579999999554444333 233322 2567888877532 11111222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++..+.+|++++ ++++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++++
T Consensus 57 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 127 (255)
T PRK07523 57 ---QGLSAHALAFDVTDH------DAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQ 127 (255)
T ss_pred ---cCceEEEEEccCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 013578899999987 67776665 36999999997532 13345678899999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+.+. .+..++|++||....... + ....|+.+|...|.+
T Consensus 128 ~~~~~~~~~~~g~iv~iss~~~~~~~---------------------------------~-----~~~~y~~sK~a~~~~ 169 (255)
T PRK07523 128 AVARHMIARGAGKIINIASVQSALAR---------------------------------P-----GIAPYTATKGAVGNL 169 (255)
T ss_pred HHHHHHHHhCCeEEEEEccchhccCC---------------------------------C-----CCccHHHHHHHHHHH
Confidence 87643 245789999997532110 0 016799999999999
Q ss_pred HHHc-----CCCCcEEEecCCeEEecc
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
++.+ ..|+++.++||+.+.++.
T Consensus 170 ~~~~a~e~~~~gi~v~~i~pg~~~t~~ 196 (255)
T PRK07523 170 TKGMATDWAKHGLQCNAIAPGYFDTPL 196 (255)
T ss_pred HHHHHHHhhHhCeEEEEEEECcccCch
Confidence 8776 348999999999888753
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.4e-08 Score=107.83 Aligned_cols=158 Identities=16% Similarity=0.140 Sum_probs=105.4
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+..|..+ .+.|.. .+.+|+++.|... +++++..
T Consensus 3 ~k~vlItGasggiG~~l----a~~l~~---------------~G~~V~~~~r~~~------~l~~~~~------------ 45 (273)
T PRK06182 3 KKVALVTGASSGIGKAT----ARRLAA---------------QGYTVYGAARRVD------KMEDLAS------------ 45 (273)
T ss_pred CCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHH------HHHHHHh------------
Confidence 57899999655444333 233322 2567888888532 2222210
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHH----
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKAL---- 315 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~L---- 315 (782)
.++.++.+|++++ ++++.+++ ++|++||+|+..... +..+..+++|+.|+..+
T Consensus 46 ---~~~~~~~~Dv~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 116 (273)
T PRK06182 46 ---LGVHPLSLDVTDE------ASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLV 116 (273)
T ss_pred ---CCCeEEEeeCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHH
Confidence 2477899999987 77776665 679999999875331 34556788999985544
Q ss_pred HHHHHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 316 LEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 316 le~a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
++.+++. +..++|++||.+..... +....|+.||...+.+.
T Consensus 117 l~~~~~~-~~g~iv~isS~~~~~~~--------------------------------------~~~~~Y~~sKaa~~~~~ 157 (273)
T PRK06182 117 LPHMRAQ-RSGRIINISSMGGKIYT--------------------------------------PLGAWYHATKFALEGFS 157 (273)
T ss_pred HHHHHhc-CCCEEEEEcchhhcCCC--------------------------------------CCccHhHHHHHHHHHHH
Confidence 4455554 56789999997532110 01156999999999986
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
... ..|+++.++|||.+.++.
T Consensus 158 ~~l~~e~~~~gi~v~~v~Pg~v~t~~ 183 (273)
T PRK06182 158 DALRLEVAPFGIDVVVIEPGGIKTEW 183 (273)
T ss_pred HHHHHHhcccCCEEEEEecCCccccc
Confidence 543 358999999999998653
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=7.1e-09 Score=108.82 Aligned_cols=175 Identities=18% Similarity=0.165 Sum_probs=105.7
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|.++.|... ...+..+++... .
T Consensus 3 ~~k~vlItGas~giG~~~----a~~l~~---------------~g~~v~~~~r~~~--~~~~~~~~l~~~---------~ 52 (256)
T PRK09186 3 KGKTILITGAGGLIGSAL----VKAILE---------------AGGIVIAADIDKE--ALNELLESLGKE---------F 52 (256)
T ss_pred CCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEecChH--HHHHHHHHHHhh---------c
Confidence 478999999655444333 333332 2567777777532 122222222110 0
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccC------c----hhhHHHHHHhhHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVR------F----DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~------f----~~~~~~~~~~Nv~gt~~L 315 (782)
....+.++.+|++++ +++..+++. +|+|||+|+... + .+.+...+++|+.++..+
T Consensus 53 --~~~~~~~~~~Dl~d~------~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 124 (256)
T PRK09186 53 --KSKKLSLVELDITDQ------ESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLF 124 (256)
T ss_pred --CCCceeEEEecCCCH------HHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHH
Confidence 013567789999998 677666653 799999996431 1 133456788899888776
Q ss_pred HHHHHHc---cCCceEEEEecceeccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 316 LEMAKEM---KQLKSFVHVSTAYSNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 316 le~a~~~---~~~~~fV~vST~~v~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
++.+... .+..++|++||.+....+. .+.+. .....+..|+.||...
T Consensus 125 ~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~-----------------------------~~~~~~~~Y~~sK~a~ 175 (256)
T PRK09186 125 SQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEG-----------------------------TSMTSPVEYAAIKAGI 175 (256)
T ss_pred HHHHHHHHHhcCCceEEEEechhhhccccchhccc-----------------------------cccCCcchhHHHHHHH
Confidence 6654321 2567999999976543221 11111 0001124799999999
Q ss_pred HHHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 392 EDMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 392 E~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
|.+.+.. ..++.+++++||.+.+
T Consensus 176 ~~l~~~la~e~~~~~i~v~~i~Pg~~~~ 203 (256)
T PRK09186 176 IHLTKYLAKYFKDSNIRVNCVSPGGILD 203 (256)
T ss_pred HHHHHHHHHHhCcCCeEEEEEecccccC
Confidence 9987644 3478999999997764
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.3e-08 Score=107.28 Aligned_cols=114 Identities=18% Similarity=0.213 Sum_probs=84.3
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch--------hhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD--------AHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~--------~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
++.++.+|++++ +.+..+++ .+|+|||+|+..... +.+.+.+++|+.|+.++++.+...
T Consensus 51 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 124 (263)
T PRK06181 51 EALVVPTDVSDA------EACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPH 124 (263)
T ss_pred cEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 678899999987 66666555 579999999874321 224467899999999999987531
Q ss_pred --cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 323 --KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 323 --~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
.+..++|++||...+.... ....|+.||...|.+.+..
T Consensus 125 ~~~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~~~~~~~~~l~~ 166 (263)
T PRK06181 125 LKASRGQIVVVSSLAGLTGVP--------------------------------------TRSGYAASKHALHGFFDSLRI 166 (263)
T ss_pred HHhcCCEEEEEecccccCCCC--------------------------------------CccHHHHHHHHHHHHHHHHHH
Confidence 2357899999986553210 0167999999999988665
Q ss_pred ---CCCCcEEEecCCeEEec
Q psy16243 399 ---GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ---~~glp~~IvRp~~v~G~ 415 (782)
..++.+.+++||.+..+
T Consensus 167 ~~~~~~i~~~~i~pg~v~t~ 186 (263)
T PRK06181 167 ELADDGVAVTVVCPGFVATD 186 (263)
T ss_pred HhhhcCceEEEEecCccccC
Confidence 25899999999888754
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.4e-08 Score=103.94 Aligned_cols=113 Identities=19% Similarity=0.258 Sum_probs=83.0
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ +++..+++ .+|+|||+|+..... +.+...+.+|+.|+.++++.+...
T Consensus 55 ~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 128 (248)
T PRK05557 55 GKALAVQGDVSDA------ESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARP 128 (248)
T ss_pred CceEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4688999999987 66655544 579999999874321 334567889999999999987643
Q ss_pred ---cCCceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 323 ---KQLKSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 323 ---~~~~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
.+.++||++||.+.. +... ...|+.+|...|.+++.+
T Consensus 129 ~~~~~~~~~v~iss~~~~~~~~~---------------------------------------~~~y~~sk~a~~~~~~~~ 169 (248)
T PRK05557 129 MMKQRSGRIINISSVVGLMGNPG---------------------------------------QANYAASKAGVIGFTKSL 169 (248)
T ss_pred HHhcCCeEEEEEcccccCcCCCC---------------------------------------CchhHHHHHHHHHHHHHH
Confidence 245789999997433 2210 167999999999887665
Q ss_pred -----CCCCcEEEecCCeEEe
Q psy16243 399 -----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G 414 (782)
..+++++++|||.+.+
T Consensus 170 a~~~~~~~i~~~~v~pg~~~~ 190 (248)
T PRK05557 170 ARELASRGITVNAVAPGFIET 190 (248)
T ss_pred HHHhhhhCeEEEEEecCccCC
Confidence 3488999999987754
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.6e-08 Score=105.48 Aligned_cols=116 Identities=13% Similarity=0.115 Sum_probs=87.0
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHH-H
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAK-E 321 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~-~ 321 (782)
.++.++.+|++++ ++++++++ .+|+|||+|+.... .+.+...+++|+.|+.++++++. .
T Consensus 59 ~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (249)
T PRK12827 59 GKALGLAFDVRDF------AATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPP 132 (249)
T ss_pred CcEEEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3688999999987 66665553 57999999997541 13345678999999999999987 1
Q ss_pred ---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 322 ---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 322 ---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
..+.+++|++||...+.... ....|+.+|...+.+++..
T Consensus 133 ~~~~~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~y~~sK~a~~~~~~~l 174 (249)
T PRK12827 133 MIRARRGGRIVNIASVAGVRGNR--------------------------------------GQVNYAASKAGLIGLTKTL 174 (249)
T ss_pred HHhcCCCeEEEEECCchhcCCCC--------------------------------------CCchhHHHHHHHHHHHHHH
Confidence 12567899999976543210 0157999999988887765
Q ss_pred -----CCCCcEEEecCCeEEecc
Q psy16243 399 -----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~~ 416 (782)
..+++++++|||.+.++.
T Consensus 175 ~~~~~~~~i~~~~i~pg~v~t~~ 197 (249)
T PRK12827 175 ANELAPRGITVNAVAPGAINTPM 197 (249)
T ss_pred HHHhhhhCcEEEEEEECCcCCCc
Confidence 248999999999998753
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.6e-08 Score=104.74 Aligned_cols=113 Identities=17% Similarity=0.238 Sum_probs=83.9
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++.++.+|++++ ++++++++ .+|+|||+|+.... .+..+..+++|+.|+.++++.+...
T Consensus 49 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 122 (239)
T TIGR01830 49 KALGVVCDVSDR------EDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIM 122 (239)
T ss_pred ceEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 578899999987 66666654 36999999997532 1344567889999999999988653
Q ss_pred --cCCceEEEEeccee-ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 --KQLKSFVHVSTAYS-NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 --~~~~~fV~vST~~v-~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+.++|+++||.+. ++.+. ...|+.+|...|.++...
T Consensus 123 ~~~~~~~~v~~sS~~~~~g~~~---------------------------------------~~~y~~~k~a~~~~~~~l~ 163 (239)
T TIGR01830 123 IKQRSGRIINISSVVGLMGNAG---------------------------------------QANYAASKAGVIGFTKSLA 163 (239)
T ss_pred HhcCCeEEEEECCccccCCCCC---------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 24679999999753 33211 157999999888877664
Q ss_pred ----CCCCcEEEecCCeEEec
Q psy16243 399 ----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G~ 415 (782)
..|+++.++||+.+.++
T Consensus 164 ~~~~~~g~~~~~i~pg~~~~~ 184 (239)
T TIGR01830 164 KELASRNITVNAVAPGFIDTD 184 (239)
T ss_pred HHHhhcCeEEEEEEECCCCCh
Confidence 25899999999877543
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.4e-08 Score=106.04 Aligned_cols=166 Identities=20% Similarity=0.245 Sum_probs=108.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|.++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++..
T Consensus 5 ~~~~~vlItGa~g~iG~~l----a~~l~~---------------~G~~v~~~~r~~~--~~~~~~~~~~~---------- 53 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAF----AEALAE---------------AGATVAFNDGLAA--EARELAAALEA---------- 53 (250)
T ss_pred CCCCEEEEeCCCChHHHHH----HHHHHH---------------cCCEEEEEeCCHH--HHHHHHHHHHh----------
Confidence 4478999999665555444 233322 1457777766532 12222222111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++++
T Consensus 54 ---~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 124 (250)
T PRK12939 54 ---AGGRAHAIAADLADP------ASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLR 124 (250)
T ss_pred ---cCCcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence 113688999999987 66666553 57999999987432 13455678899999999998
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+..++|++||........ ....|+.+|...|.+
T Consensus 125 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~y~~sK~~~~~~ 166 (250)
T PRK12939 125 AALPHLRDSGRGRIVNLASDTALWGAP--------------------------------------KLGAYVASKGAVIGM 166 (250)
T ss_pred HHHHHHHHcCCeEEEEECchhhccCCC--------------------------------------CcchHHHHHHHHHHH
Confidence 87542 1245899999975432110 015699999999999
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
++.. ..++.+.+++||.+..+
T Consensus 167 ~~~l~~~~~~~~i~v~~v~pg~v~t~ 192 (250)
T PRK12939 167 TRSLARELGGRGITVNAIAPGLTATE 192 (250)
T ss_pred HHHHHHHHhhhCEEEEEEEECCCCCc
Confidence 8765 24789999999877653
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.7e-08 Score=105.41 Aligned_cols=165 Identities=18% Similarity=0.200 Sum_probs=110.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+++++|||..+..|..+ .+.|.+. +.+|+++.|.... ..+...++.
T Consensus 3 ~~~~~vlItGasg~iG~~l----~~~l~~~---------------G~~V~~~~r~~~~--~~~~~~~~~----------- 50 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGI----ARRFAAE---------------GARVVVTDRNEEA--AERVAAEIL----------- 50 (251)
T ss_pred cCCcEEEEECCCChHHHHH----HHHHHHC---------------CCEEEEEeCCHHH--HHHHHHHHh-----------
Confidence 3468999999655555433 2333321 5678888887432 111111110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Ll 316 (782)
. ..++.++.+|++++ +++..+++ .+|+|||+|+.... .+.+++.+++|+.|+.+++
T Consensus 51 --~-~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 121 (251)
T PRK07231 51 --A-GGRAIAVAADVSDE------ADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWT 121 (251)
T ss_pred --c-CCeEEEEECCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHH
Confidence 0 13588899999998 77776665 46999999986321 1345568899999988887
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+... .+.++||++||..++.... ....|+.+|...+.
T Consensus 122 ~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~y~~sk~~~~~ 163 (251)
T PRK07231 122 QAAVPAMRGEGGGAIVNVASTAGLRPRP--------------------------------------GLGWYNASKGAVIT 163 (251)
T ss_pred HHHHHHHHhcCCcEEEEEcChhhcCCCC--------------------------------------CchHHHHHHHHHHH
Confidence 776532 2568899999987654211 01579999998888
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
++... ..++++..++||.+.++
T Consensus 164 ~~~~~a~~~~~~~i~v~~i~pg~~~t~ 190 (251)
T PRK07231 164 LTKALAAELGPDKIRVNAVAPVVVETG 190 (251)
T ss_pred HHHHHHHHhhhhCeEEEEEEECccCCC
Confidence 77665 23899999999988654
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.6e-08 Score=106.15 Aligned_cols=165 Identities=17% Similarity=0.151 Sum_probs=109.2
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
...+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+...++ .
T Consensus 15 ~l~~k~~lItGas~gIG~~l----a~~l~~---------------~G~~v~~~~~~~~--~~~~~~~~~-~--------- 63 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESI----VRLFHK---------------HGAKVCIVDLQDD--LGQNVCDSL-G--------- 63 (280)
T ss_pred ccCCCEEEEECCCchHHHHH----HHHHHH---------------cCCEEEEEeCCHH--HHHHHHHHh-c---------
Confidence 35578999999654444333 233322 1567777776432 112222211 0
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc---------hhhHHHHHHhhHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF---------DAHLKVAVSINLRATKA 314 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~ 314 (782)
...++.++.+|++++ ++++++++ ++|++||+||.... .+.++..+++|+.|+.+
T Consensus 64 ----~~~~~~~~~~Dl~d~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 133 (280)
T PLN02253 64 ----GEPNVCFFHCDVTVE------DDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFL 133 (280)
T ss_pred ----CCCceEEEEeecCCH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHH
Confidence 013688999999998 67766665 58999999987431 13456789999999999
Q ss_pred HHHHHHHc---cCCceEEEEeccee-ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 315 LLEMAKEM---KQLKSFVHVSTAYS-NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 315 Lle~a~~~---~~~~~fV~vST~~v-~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
+++.+... .+-.++|++||... ++.+ .+..|+.||..
T Consensus 134 ~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a 174 (280)
T PLN02253 134 GMKHAARIMIPLKKGSIVSLCSVASAIGGL---------------------------------------GPHAYTGSKHA 174 (280)
T ss_pred HHHHHHHHHHhcCCceEEEecChhhcccCC---------------------------------------CCcccHHHHHH
Confidence 99876532 12357888888653 2211 12579999999
Q ss_pred HHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 391 AEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 391 aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.|.+++.. ..++.+.+++||.+..+
T Consensus 175 ~~~~~~~la~e~~~~gi~v~~i~pg~v~t~ 204 (280)
T PLN02253 175 VLGLTRSVAAELGKHGIRVNCVSPYAVPTA 204 (280)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence 99998876 24899999999988765
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.6e-08 Score=102.96 Aligned_cols=115 Identities=19% Similarity=0.194 Sum_probs=83.8
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc----h----hhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF----D----AHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f----~----~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
++.++.+|++++ +++.++++ .+|+|||+|+.... . +.+.+.+++|+.|+.++++.+...
T Consensus 53 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (248)
T PRK06123 53 EALAVAADVADE------ADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKR 126 (248)
T ss_pred cEEEEEeccCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 577899999987 66666655 57999999986431 1 234567899999999998886542
Q ss_pred c------CCceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 323 K------QLKSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 323 ~------~~~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
- .-.++|++||.... +.+. ....|+.+|...|.++
T Consensus 127 ~~~~~~~~~g~iv~~sS~~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~ 168 (248)
T PRK06123 127 MSTRHGGRGGAIVNVSSMAARLGSPG--------------------------------------EYIDYAASKGAIDTMT 168 (248)
T ss_pred HHhcCCCCCeEEEEECchhhcCCCCC--------------------------------------CccchHHHHHHHHHHH
Confidence 1 12369999997543 2210 0035999999999988
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
..+ ..++++.++||+.++++.
T Consensus 169 ~~la~~~~~~~i~v~~i~pg~v~~~~ 194 (248)
T PRK06123 169 IGLAKEVAAEGIRVNAVRPGVIYTEI 194 (248)
T ss_pred HHHHHHhcccCeEEEEEecCcccCch
Confidence 765 248999999999999863
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.3e-08 Score=106.84 Aligned_cols=168 Identities=18% Similarity=0.168 Sum_probs=109.6
Q ss_pred ccCcccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccc
Q psy16243 167 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFD 246 (782)
Q Consensus 167 ~~~p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~ 246 (782)
++.+.+.+|+++|||..+..|..+ .+.|.+. +.+|.++.|.... ..+..++.
T Consensus 3 ~~~~~~~~k~vlItG~sg~IG~~~----a~~l~~~---------------g~~v~~~~~~~~~--~~~~~~~~------- 54 (255)
T PRK05717 3 EPNPGHNGRVALVTGAARGIGLGI----AAWLIAE---------------GWQVVLADLDRER--GSKVAKAL------- 54 (255)
T ss_pred CCCcccCCCEEEEeCCcchHHHHH----HHHHHHc---------------CCEEEEEcCCHHH--HHHHHHHc-------
Confidence 345667789999999544444333 2333221 4567777664321 11111111
Q ss_pred cccccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc---------hhhHHHHHHhhHH
Q psy16243 247 PMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF---------DAHLKVAVSINLR 310 (782)
Q Consensus 247 ~l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~ 310 (782)
..++.++.+|++++ +++.++++ .+|++||+|+.... .+.+++.+++|+.
T Consensus 55 ---------~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~ 119 (255)
T PRK05717 55 ---------GENAWFIAMDVADE------AQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLT 119 (255)
T ss_pred ---------CCceEEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhH
Confidence 13577899999987 55544333 36999999997532 1334578899999
Q ss_pred HHHHHHHHHHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHH
Q psy16243 311 ATKALLEMAKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTK 388 (782)
Q Consensus 311 gt~~Lle~a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK 388 (782)
|+.++++++... ++..++|++||....... + ..+.|+.+|
T Consensus 120 ~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~---------------------------------~-----~~~~Y~~sK 161 (255)
T PRK05717 120 GPMLLAKHCAPYLRAHNGAIVNLASTRARQSE---------------------------------P-----DTEAYAASK 161 (255)
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC---------------------------------C-----CCcchHHHH
Confidence 999999998632 123579999987543211 0 116799999
Q ss_pred HHHHHHHHHc----CCCCcEEEecCCeEEec
Q psy16243 389 QVAEDMVRRG----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 389 ~~aE~ll~~~----~~glp~~IvRp~~v~G~ 415 (782)
...|.+++.. ..++++.+++||.+.++
T Consensus 162 aa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~ 192 (255)
T PRK05717 162 GGLLALTHALAISLGPEIRVNAVSPGWIDAR 192 (255)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecccCcCC
Confidence 9999888765 34689999999988875
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.2e-08 Score=103.04 Aligned_cols=114 Identities=15% Similarity=0.192 Sum_probs=84.1
Q ss_pred eeEEecCCCCCCCCCCHHhHHHHhc---CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc----cC
Q psy16243 259 MVAVTGDCLKPGVGINSEDRQTLVD---NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM----KQ 324 (782)
Q Consensus 259 v~~i~gDi~~~~lGl~~~~~~~l~~---~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~----~~ 324 (782)
..++.+|++++ +++.++++ .+|+|||+|+..... +..++.+++|+.|+.++++.+... +.
T Consensus 55 ~~~~~~D~~~~------~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 128 (245)
T PRK07060 55 CEPLRLDVGDD------AAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGR 128 (245)
T ss_pred CeEEEecCCCH------HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 45678999886 56666665 479999999875321 345567789999999999987653 11
Q ss_pred CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----C
Q psy16243 325 LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----G 399 (782)
Q Consensus 325 ~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~ 399 (782)
..+||++||...+.... ....|+.+|...|.+++.+ .
T Consensus 129 ~~~iv~~sS~~~~~~~~--------------------------------------~~~~y~~sK~a~~~~~~~~a~~~~~ 170 (245)
T PRK07060 129 GGSIVNVSSQAALVGLP--------------------------------------DHLAYCASKAALDAITRVLCVELGP 170 (245)
T ss_pred CcEEEEEccHHHcCCCC--------------------------------------CCcHhHHHHHHHHHHHHHHHHHHhh
Confidence 36899999976543210 0167999999999988766 2
Q ss_pred CCCcEEEecCCeEEecc
Q psy16243 400 AGMPVAMVRPSIVIATN 416 (782)
Q Consensus 400 ~glp~~IvRp~~v~G~~ 416 (782)
.++++..+||+.+.++.
T Consensus 171 ~~i~v~~v~pg~v~~~~ 187 (245)
T PRK07060 171 HGIRVNSVNPTVTLTPM 187 (245)
T ss_pred hCeEEEEEeeCCCCCch
Confidence 47999999999998754
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.92 E-value=9.7e-09 Score=106.52 Aligned_cols=225 Identities=16% Similarity=0.200 Sum_probs=140.6
Q ss_pred eEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCcccc
Q psy16243 177 VAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYL 256 (782)
Q Consensus 177 vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~~ 256 (782)
|+|+|.+|..|..+ .+.|.. ...+|.+++|..+.... +.++.
T Consensus 1 I~V~GatG~~G~~v----~~~L~~---------------~~~~V~~l~R~~~~~~~-~~l~~------------------ 42 (233)
T PF05368_consen 1 ILVTGATGNQGRSV----VRALLS---------------AGFSVRALVRDPSSDRA-QQLQA------------------ 42 (233)
T ss_dssp EEEETTTSHHHHHH----HHHHHH---------------TTGCEEEEESSSHHHHH-HHHHH------------------
T ss_pred CEEECCccHHHHHH----HHHHHh---------------CCCCcEEEEeccchhhh-hhhhc------------------
Confidence 68999666555443 233321 36789999998642222 12221
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEeccee
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYS 336 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v 336 (782)
..++.+.+|+.++ +.+.++++++|+||.+-+... ..-+....+++++|++. ++++||+.|....
T Consensus 43 ~g~~vv~~d~~~~------~~l~~al~g~d~v~~~~~~~~---------~~~~~~~~~li~Aa~~a-gVk~~v~ss~~~~ 106 (233)
T PF05368_consen 43 LGAEVVEADYDDP------ESLVAALKGVDAVFSVTPPSH---------PSELEQQKNLIDAAKAA-GVKHFVPSSFGAD 106 (233)
T ss_dssp TTTEEEES-TT-H------HHHHHHHTTCSEEEEESSCSC---------CCHHHHHHHHHHHHHHH-T-SEEEESEESSG
T ss_pred ccceEeecccCCH------HHHHHHHcCCceEEeecCcch---------hhhhhhhhhHHHhhhcc-ccceEEEEEeccc
Confidence 2567889999877 999999999999998876543 11233468899999998 6999997443332
Q ss_pred ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCC-ccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEec
Q psy16243 337 NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWP-NTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 337 ~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~p-n~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~ 415 (782)
+.... ...| ...-..|...|+.+++. +++.+++|||.-+..
T Consensus 107 ~~~~~------------------------------------~~~p~~~~~~~k~~ie~~l~~~--~i~~t~i~~g~f~e~ 148 (233)
T PF05368_consen 107 YDESS------------------------------------GSEPEIPHFDQKAEIEEYLRES--GIPYTIIRPGFFMEN 148 (233)
T ss_dssp TTTTT------------------------------------TSTTHHHHHHHHHHHHHHHHHC--TSEBEEEEE-EEHHH
T ss_pred ccccc------------------------------------cccccchhhhhhhhhhhhhhhc--cccceeccccchhhh
Confidence 21100 0011 23445788999998876 899999999976542
Q ss_pred cCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhc-CceeeeccCCCcccccc-chhHHHHHHHHhhhhcc
Q psy16243 416 NKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGL-GLLRSMHADPELVADMV-PADNVINCIISAAWNVH 493 (782)
Q Consensus 416 ~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~d~V-pVDdva~aii~a~~~~~ 493 (782)
.-.+.. ++. .... .....+.++++....++ ..+|+++++..++..+.
T Consensus 149 ~~~~~~--------------------~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~ 197 (233)
T PF05368_consen 149 LLPPFA--------------------PVV-----------DIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPE 197 (233)
T ss_dssp HHTTTH--------------------HTT-----------CSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGG
T ss_pred hhhhhc--------------------ccc-----------cccccceEEEEccCCCccccccccHHHHHHHHHHHHcChH
Confidence 211111 000 0001 11234566666556664 99999999998886642
Q ss_pred ccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 494 QTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
. ...+..+.+++ ..+|++|+++.+.+.+|+.
T Consensus 198 ~----------------------~~~~~~~~~~~---~~~t~~eia~~~s~~~G~~ 228 (233)
T PF05368_consen 198 K----------------------HNNGKTIFLAG---ETLTYNEIAAILSKVLGKK 228 (233)
T ss_dssp G----------------------TTEEEEEEEGG---GEEEHHHHHHHHHHHHTSE
T ss_pred H----------------------hcCCEEEEeCC---CCCCHHHHHHHHHHHHCCc
Confidence 1 11466777655 5789999999999988864
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.8e-08 Score=102.86 Aligned_cols=169 Identities=17% Similarity=0.176 Sum_probs=108.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... .+.+.+...
T Consensus 10 ~~~k~ilItGa~g~IG~~l----a~~l~~---------------~G~~V~~~~r~~~~---~~~~~~~i~---------- 57 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQI----AEALGE---------------AGARVVLSARKAEE---LEEAAAHLE---------- 57 (259)
T ss_pred cCCCEEEEECCCchHHHHH----HHHHHH---------------cCCEEEEEeCCHHH---HHHHHHHHH----------
Confidence 3478999999554444333 222221 25678888875321 111211110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
....++.++.+|++++ ++++.+++ .+|+|||+|+.... .+.+++.+++|+.|+.++++
T Consensus 58 --~~~~~~~~~~~Dl~d~------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 129 (259)
T PRK08213 58 --ALGIDALWIAADVADE------ADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQ 129 (259)
T ss_pred --hcCCeEEEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHH
Confidence 0113678899999987 66654443 47999999986421 13345678899999999999
Q ss_pred HHHHc----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKEM----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
++... ++..+||++||...+..... . . .....|+.+|+..|.
T Consensus 130 ~~~~~~l~~~~~~~~v~~sS~~~~~~~~~---~-~------------------------------~~~~~Y~~sKa~~~~ 175 (259)
T PRK08213 130 AVAKRSMIPRGYGRIINVASVAGLGGNPP---E-V------------------------------MDTIAYNTSKGAVIN 175 (259)
T ss_pred HHHHHHHHhcCCeEEEEECChhhccCCCc---c-c------------------------------cCcchHHHHHHHHHH
Confidence 87543 24578999999765432110 0 0 011689999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEe
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+++.+ ..++++.+++|+.+-.
T Consensus 176 ~~~~~a~~~~~~gi~v~~v~Pg~~~t 201 (259)
T PRK08213 176 FTRALAAEWGPHGIRVNAIAPGFFPT 201 (259)
T ss_pred HHHHHHHHhcccCEEEEEEecCcCCC
Confidence 98876 2478888889877654
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.3e-08 Score=101.84 Aligned_cols=165 Identities=18% Similarity=0.215 Sum_probs=109.4
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+++++|||..+..|..+ .+.|.. .+.+|.++.|... ...+...++..
T Consensus 6 ~~~~vlVtG~sg~iG~~l----~~~L~~---------------~G~~Vi~~~r~~~--~~~~~~~~~~~----------- 53 (239)
T PRK07666 6 QGKNALITGAGRGIGRAV----AIALAK---------------EGVNVGLLARTEE--NLKAVAEEVEA----------- 53 (239)
T ss_pred CCCEEEEEcCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHH-----------
Confidence 468899999544444333 233322 2567888888643 12222222210
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ +++..+++ .+|+|||+|+.... .+...+.+++|+.|+.++++.
T Consensus 54 --~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 125 (239)
T PRK07666 54 --YGVKVVIATADVSDY------EEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRA 125 (239)
T ss_pred --hCCeEEEEECCCCCH------HHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 113688899999987 66666665 68999999986432 133456789999999999888
Q ss_pred HHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+... .+.+++|++||...+.... ....|+.+|.+.+.++
T Consensus 126 ~~~~~~~~~~~~iv~~ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~ 167 (239)
T PRK07666 126 VLPSMIERQSGDIINISSTAGQKGAA--------------------------------------VTSAYSASKFGVLGLT 167 (239)
T ss_pred HHHHHHhCCCcEEEEEcchhhccCCC--------------------------------------CCcchHHHHHHHHHHH
Confidence 7531 2467899999976442210 1167999999988887
Q ss_pred HHc-----CCCCcEEEecCCeEEec
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~ 415 (782)
..+ ..|+++.++|||.+..+
T Consensus 168 ~~~a~e~~~~gi~v~~v~pg~v~t~ 192 (239)
T PRK07666 168 ESLMQEVRKHNIRVTALTPSTVATD 192 (239)
T ss_pred HHHHHHhhccCcEEEEEecCcccCc
Confidence 654 34899999999988764
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.7e-08 Score=106.08 Aligned_cols=166 Identities=20% Similarity=0.194 Sum_probs=110.7
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|. + .+.+|.++.|... ...+...++..
T Consensus 4 ~~k~vlItGa~~~IG~~l----a~~l~----------~-----~G~~V~~~~r~~~--~~~~~~~~~~~----------- 51 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTL----AVRAA----------R-----AGADVVLAARTAE--RLDEVAAEIDD----------- 51 (258)
T ss_pred CCCEEEEECCCCcHHHHH----HHHHH----------H-----cCCEEEEEeCCHH--HHHHHHHHHHH-----------
Confidence 368999999544444333 22232 1 2567888888642 12222222110
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++.+++ .+|+|||+|+.... .+.+...+++|+.|+..+++
T Consensus 52 --~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 123 (258)
T PRK07890 52 --LGRRALAVPTDITDE------DQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQ 123 (258)
T ss_pred --hCCceEEEecCCCCH------HHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHH
Confidence 113678999999987 66655553 46999999986421 14455788999999999999
Q ss_pred HHHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 318 MAKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 318 ~a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
++... +...++|++||....... + ..+.|+.+|...|.++
T Consensus 124 ~~~~~~~~~~~~ii~~sS~~~~~~~---------------------------------~-----~~~~Y~~sK~a~~~l~ 165 (258)
T PRK07890 124 AFTPALAESGGSIVMINSMVLRHSQ---------------------------------P-----KYGAYKMAKGALLAAS 165 (258)
T ss_pred HHHHHHHhCCCEEEEEechhhccCC---------------------------------C-----CcchhHHHHHHHHHHH
Confidence 98642 122589999997643211 0 1167999999999998
Q ss_pred HHcC-----CCCcEEEecCCeEEecc
Q psy16243 396 RRGG-----AGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~~-----~glp~~IvRp~~v~G~~ 416 (782)
+.+. .++++.++|||.++++.
T Consensus 166 ~~~a~~~~~~~i~v~~v~pg~v~~~~ 191 (258)
T PRK07890 166 QSLATELGPQGIRVNSVAPGYIWGDP 191 (258)
T ss_pred HHHHHHHhhcCcEEEEEeCCccCcHH
Confidence 8762 48999999999999874
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.1e-08 Score=101.84 Aligned_cols=111 Identities=18% Similarity=0.220 Sum_probs=77.2
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc---CceEEEEcCcccCch-------hhHHHHHHhhHHHHH----HHHHHHHHcc
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD---NIHVVFHCAATVRFD-------AHLKVAVSINLRATK----ALLEMAKEMK 323 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~---~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~----~Lle~a~~~~ 323 (782)
.++++.+|++++ +++.++++ ++|+|||+|+..... +.+...+++|+.++. .+++.+++.
T Consensus 48 ~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~- 120 (227)
T PRK08219 48 GATPFPVDLTDP------EAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA- 120 (227)
T ss_pred cceEEecCCCCH------HHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-
Confidence 477899999997 77887776 489999999875321 234556888999854 444444443
Q ss_pred CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC---C
Q psy16243 324 QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG---A 400 (782)
Q Consensus 324 ~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~---~ 400 (782)
..++|++||..+++... ....|+.+|...|.++.... .
T Consensus 121 -~~~~v~~ss~~~~~~~~--------------------------------------~~~~y~~~K~a~~~~~~~~~~~~~ 161 (227)
T PRK08219 121 -HGHVVFINSGAGLRANP--------------------------------------GWGSYAASKFALRALADALREEEP 161 (227)
T ss_pred -CCeEEEEcchHhcCcCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhc
Confidence 46899999987653211 01579999999998877652 2
Q ss_pred C-CcEEEecCCeEEe
Q psy16243 401 G-MPVAMVRPSIVIA 414 (782)
Q Consensus 401 g-lp~~IvRp~~v~G 414 (782)
+ +++..++||.+.+
T Consensus 162 ~~i~~~~i~pg~~~~ 176 (227)
T PRK08219 162 GNVRVTSVHPGRTDT 176 (227)
T ss_pred CCceEEEEecCCccc
Confidence 3 7777777775543
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=5e-08 Score=102.68 Aligned_cols=113 Identities=19% Similarity=0.197 Sum_probs=79.9
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++.++.+|+++. +++..+++ .+|+|||+|+.... .+.++..+++|+.|+..+++.+...
T Consensus 60 ~~~~~~~Dl~d~------~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 133 (258)
T PRK09134 60 RAVALQADLADE------AEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARAL 133 (258)
T ss_pred eEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 688899999987 66665554 47999999986422 1345678899999999999987653
Q ss_pred --cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 323 --KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 323 --~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
..-.++|++||...+.. .|. ...|+.||...|.+.+.+
T Consensus 134 ~~~~~~~iv~~~s~~~~~~---------------------------------~p~-----~~~Y~~sK~a~~~~~~~la~ 175 (258)
T PRK09134 134 PADARGLVVNMIDQRVWNL---------------------------------NPD-----FLSYTLSKAALWTATRTLAQ 175 (258)
T ss_pred HhcCCceEEEECchhhcCC---------------------------------CCC-----chHHHHHHHHHHHHHHHHHH
Confidence 12357777776543221 010 157999999999888776
Q ss_pred --CCCCcEEEecCCeEEe
Q psy16243 399 --GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 --~~glp~~IvRp~~v~G 414 (782)
..++.+..++||.+..
T Consensus 176 ~~~~~i~v~~i~PG~v~t 193 (258)
T PRK09134 176 ALAPRIRVNAIGPGPTLP 193 (258)
T ss_pred HhcCCcEEEEeecccccC
Confidence 2358888899987754
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.7e-10 Score=119.51 Aligned_cols=122 Identities=27% Similarity=0.316 Sum_probs=68.9
Q ss_pred ccccceeeecCcCccCCCCCCccccCc---eeEEEecccc---------------ccccccccccCCCCCCeEEEEeccc
Q psy16243 13 RFEEIFEGEGLSGILSLGLNLNQKSGP---ISASKNSTAS---------------LNSCLPGERLDHYTTESFVHVSTAY 74 (782)
Q Consensus 13 ~~~~~~~~~gd~~~~~~~~~~~~~~~~---v~~~i~~~~~---------------~~~~~~~~~~~~~~l~~f~hvsta~ 74 (782)
..+++++++||+++|++||++++...+ |++||||||. .++..+.+-....+-++|+||||+|
T Consensus 58 ~~~ri~~v~GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~ 137 (249)
T PF07993_consen 58 ALSRIEVVEGDLSQPNLGLSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAY 137 (249)
T ss_dssp HTTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGG
T ss_pred hhccEEEEeccccccccCCChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEecccc
Confidence 478999999999999999999755433 9999999997 2222222222211234999999999
Q ss_pred ccCCCC-CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcC--CCCeEEEeCCCcc
Q psy16243 75 SNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRPSID 151 (782)
Q Consensus 75 ~~~~~~-~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~--~~~~~~ivRps~~ 151 (782)
.++... .++|+.++. ..........+||.|..+|.++|+++++.. .+.|+.++||..+
T Consensus 138 v~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i 198 (249)
T PF07993_consen 138 VAGSRPGTIEEKVYPE-------------------EEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGII 198 (249)
T ss_dssp GTTS-TTT--SSS-HH-------------------H--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EE
T ss_pred ccCCCCCccccccccc-------------------ccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 988765 456666651 011122234677889999999999999742 3688999998877
Q ss_pred cc
Q psy16243 152 LG 153 (782)
Q Consensus 152 ~~ 153 (782)
.+
T Consensus 199 ~g 200 (249)
T PF07993_consen 199 VG 200 (249)
T ss_dssp E-
T ss_pred cc
Confidence 54
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.7e-08 Score=103.67 Aligned_cols=113 Identities=14% Similarity=0.158 Sum_probs=83.4
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccCc----h----hhHHHHHHhhHHHHHHHHHH----
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVRF----D----AHLKVAVSINLRATKALLEM---- 318 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~f----~----~~~~~~~~~Nv~gt~~Lle~---- 318 (782)
++.++.+|++++ +++.++++. +|++||+|+.... . +.++..+++|+.|+.++++.
T Consensus 51 ~~~~~~~Dl~~~------~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~ 124 (257)
T PRK07024 51 RVSVYAADVRDA------DALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAP 124 (257)
T ss_pred eeEEEEcCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHH
Confidence 688999999987 666665543 6999999986431 1 34567889999999998874
Q ss_pred HHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 319 AKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 319 a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
+++. +..++|++||....... | ....|+.||+..|.+....
T Consensus 125 ~~~~-~~~~iv~isS~~~~~~~---------------------------------~-----~~~~Y~asK~a~~~~~~~l 165 (257)
T PRK07024 125 MRAA-RRGTLVGIASVAGVRGL---------------------------------P-----GAGAYSASKAAAIKYLESL 165 (257)
T ss_pred HHhc-CCCEEEEEechhhcCCC---------------------------------C-----CCcchHHHHHHHHHHHHHH
Confidence 3333 45789999987643210 0 0157999999999988665
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..|++++++|||.+.++
T Consensus 166 ~~e~~~~gi~v~~v~Pg~v~t~ 187 (257)
T PRK07024 166 RVELRPAGVRVVTIAPGYIRTP 187 (257)
T ss_pred HHHhhccCcEEEEEecCCCcCc
Confidence 34899999999998764
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.8e-08 Score=99.66 Aligned_cols=164 Identities=19% Similarity=0.221 Sum_probs=108.1
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+++++|||..|..|..+ .+.|.+ .+.+|+++.|... ...+..+++.
T Consensus 5 ~~~~ilItGatg~iG~~l----a~~l~~---------------~g~~V~~~~r~~~--~~~~~~~~l~------------ 51 (237)
T PRK07326 5 KGKVALITGGSKGIGFAI----AEALLA---------------EGYKVAITARDQK--ELEEAAAELN------------ 51 (237)
T ss_pred CCCEEEEECCCCcHHHHH----HHHHHH---------------CCCEEEEeeCCHH--HHHHHHHHHh------------
Confidence 368999999655555444 233321 1457888888532 1111122211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
.. .++..+.+|++++ +++..+++ .+|+|||+|+.... .+.+.+.+++|+.|+..++++
T Consensus 52 -~~-~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 123 (237)
T PRK07326 52 -NK-GNVLGLAADVRDE------ADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKA 123 (237)
T ss_pred -cc-CcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHH
Confidence 01 4688899999987 66655554 68999999987532 133456788999999999888
Q ss_pred HHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 319 AKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 319 a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
+... .+..++|++||.+..... .....|+.+|+..+.+.+
T Consensus 124 ~~~~~~~~~~~iv~~ss~~~~~~~--------------------------------------~~~~~y~~sk~a~~~~~~ 165 (237)
T PRK07326 124 AVPALKRGGGYIINISSLAGTNFF--------------------------------------AGGAAYNASKFGLVGFSE 165 (237)
T ss_pred HHHHHHHCCeEEEEECChhhccCC--------------------------------------CCCchHHHHHHHHHHHHH
Confidence 7543 245689999997543210 001579999998888777
Q ss_pred Hc-----CCCCcEEEecCCeEEec
Q psy16243 397 RG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~ 415 (782)
.. ..|++++++||+.+..+
T Consensus 166 ~~~~~~~~~gi~v~~v~pg~~~t~ 189 (237)
T PRK07326 166 AAMLDLRQYGIKVSTIMPGSVATH 189 (237)
T ss_pred HHHHHhcccCcEEEEEeeccccCc
Confidence 64 35899999999988653
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=2e-08 Score=109.11 Aligned_cols=174 Identities=15% Similarity=0.092 Sum_probs=107.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+...++
T Consensus 24 l~~k~vlITGasggIG~~~----a~~L~~---------------~G~~Vv~~~R~~~--~~~~~~~~l------------ 70 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLET----TRALAQ---------------AGAHVIVPARRPD--VAREALAGI------------ 70 (315)
T ss_pred CCCCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHh------------
Confidence 3578999999655444333 233322 1567888887532 112211111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----hhhHHHHHHhhHHHHHHHHHH-
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----DAHLKVAVSINLRATKALLEM- 318 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----~~~~~~~~~~Nv~gt~~Lle~- 318 (782)
.++.++.+|+++. ++++.+++ .+|++||+||.... .+.++..+++|+.|+..+++.
T Consensus 71 -----~~v~~~~~Dl~d~------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~l 139 (315)
T PRK06196 71 -----DGVEVVMLDLADL------ESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLL 139 (315)
T ss_pred -----hhCeEEEccCCCH------HHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHH
Confidence 1367889999987 66665553 57999999996432 134566789999997666654
Q ss_pred ---HHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 ---AKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 ---a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+++. +..++|++||..........++..+. .+ ......|+.||...+.+.
T Consensus 140 l~~l~~~-~~~~iV~vSS~~~~~~~~~~~~~~~~-----------------------~~---~~~~~~Y~~SK~a~~~~~ 192 (315)
T PRK06196 140 WPALAAG-AGARVVALSSAGHRRSPIRWDDPHFT-----------------------RG---YDKWLAYGQSKTANALFA 192 (315)
T ss_pred HHHHHhc-CCCeEEEECCHHhccCCCCccccCcc-----------------------CC---CChHHHHHHHHHHHHHHH
Confidence 4443 34789999997533211100000000 00 001157999999999887
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
... ..|+.++++|||.+.++.
T Consensus 193 ~~la~~~~~~gi~v~~v~PG~v~t~~ 218 (315)
T PRK06196 193 VHLDKLGKDQGVRAFSVHPGGILTPL 218 (315)
T ss_pred HHHHHHhcCCCcEEEEeeCCcccCCc
Confidence 654 358999999999998764
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.2e-08 Score=106.32 Aligned_cols=168 Identities=15% Similarity=0.119 Sum_probs=110.0
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+..|..+ .+.|.. .+.+|++..|.... . .+.+.+...
T Consensus 43 ~~~~k~iLItGasggIG~~l----a~~l~~---------------~G~~V~l~~r~~~~-~-~~~~~~~~~--------- 92 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAV----AVLFAK---------------EGADIAIVYLDEHE-D-ANETKQRVE--------- 92 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCcch-H-HHHHHHHHH---------
Confidence 34578999999654444333 223321 15667777665321 1 111211111
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch--------hhHHHHHHhhHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD--------AHLKVAVSINLRATKAL 315 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~--------~~~~~~~~~Nv~gt~~L 315 (782)
....++.++.+|+++. +.++++++ .+|+|||+|+..... +.+...+++|+.|+.++
T Consensus 93 ---~~~~~~~~~~~Dl~~~------~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l 163 (290)
T PRK06701 93 ---KEGVKCLLIPGDVSDE------AFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHM 163 (290)
T ss_pred ---hcCCeEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHH
Confidence 0113678899999987 66666554 479999999864221 23456789999999999
Q ss_pred HHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 316 LEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 316 le~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++++... ....++|++||..++.... . ...|+.||...+.+
T Consensus 164 ~~a~~~~~~~~g~iV~isS~~~~~~~~---------------------------------~-----~~~Y~~sK~a~~~l 205 (290)
T PRK06701 164 TKAALPHLKQGSAIINTGSITGYEGNE---------------------------------T-----LIDYSATKGAIHAF 205 (290)
T ss_pred HHHHHHHHhhCCeEEEEecccccCCCC---------------------------------C-----cchhHHHHHHHHHH
Confidence 9998653 2336899999987654311 0 15699999999998
Q ss_pred HHHcC-----CCCcEEEecCCeEEec
Q psy16243 395 VRRGG-----AGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~~-----~glp~~IvRp~~v~G~ 415 (782)
++... .|+++..++||.+..+
T Consensus 206 ~~~la~~~~~~gIrv~~i~pG~v~T~ 231 (290)
T PRK06701 206 TRSLAQSLVQKGIRVNAVAPGPIWTP 231 (290)
T ss_pred HHHHHHHhhhcCeEEEEEecCCCCCc
Confidence 87762 4899999999988764
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.9e-08 Score=118.97 Aligned_cols=165 Identities=18% Similarity=0.170 Sum_probs=109.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... . +.+.+.+.
T Consensus 420 l~gk~vLVTGasggIG~~l----a~~L~~---------------~Ga~Vvl~~r~~~~--~-~~~~~~l~---------- 467 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKAT----AKRLAA---------------EGACVVLADLDEEA--A-EAAAAELG---------- 467 (681)
T ss_pred CCCCEEEEecCCCHHHHHH----HHHHHH---------------CcCEEEEEeCCHHH--H-HHHHHHHh----------
Confidence 4679999999655444333 222321 14578888876431 1 11111110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
.. .++.++.+|++++ +++..+++ ++|+|||+|+.... .+.++..+++|+.|+..+++
T Consensus 468 --~~-~~v~~v~~Dvtd~------~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 538 (681)
T PRK08324 468 --GP-DRALGVACDVTDE------AAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAR 538 (681)
T ss_pred --cc-CcEEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 01 3688999999987 66665554 57999999996432 13455678999999999987
Q ss_pred HHHHc---cCC-ceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKEM---KQL-KSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~~---~~~-~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+... .+. .+||++||..+..... ....|+.||...|.
T Consensus 539 ~~~~~l~~~~~~g~iV~vsS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~ 580 (681)
T PRK08324 539 EAVRIMKAQGLGGSIVFIASKNAVNPGP--------------------------------------NFGAYGAAKAAELH 580 (681)
T ss_pred HHHHHHHhcCCCcEEEEECCccccCCCC--------------------------------------CcHHHHHHHHHHHH
Confidence 76432 133 6899999975532110 01679999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEE-ec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVI-AT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~-G~ 415 (782)
+++.+ ..|+++.+++|+.|+ ++
T Consensus 581 l~~~la~e~~~~gIrvn~v~Pg~v~~~t 608 (681)
T PRK08324 581 LVRQLALELGPDGIRVNGVNPDAVVRGS 608 (681)
T ss_pred HHHHHHHHhcccCeEEEEEeCceeecCC
Confidence 98876 247999999999998 43
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1e-07 Score=99.15 Aligned_cols=114 Identities=25% Similarity=0.304 Sum_probs=83.6
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ ++++++++ ++|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 55 ~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 128 (245)
T PRK12937 55 GRAIAVQADVADA------AAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARH 128 (245)
T ss_pred CeEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHH
Confidence 4688999999987 66766665 57999999997532 1345567889999999999887542
Q ss_pred -cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---
Q psy16243 323 -KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--- 398 (782)
Q Consensus 323 -~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--- 398 (782)
..-.++|++||....... | ..+.|+.+|...|.+++..
T Consensus 129 ~~~~~~iv~~ss~~~~~~~---------------------------------~-----~~~~Y~~sK~a~~~~~~~~a~~ 170 (245)
T PRK12937 129 LGQGGRIINLSTSVIALPL---------------------------------P-----GYGPYAASKAAVEGLVHVLANE 170 (245)
T ss_pred hccCcEEEEEeeccccCCC---------------------------------C-----CCchhHHHHHHHHHHHHHHHHH
Confidence 223589999987543210 0 1167999999999998765
Q ss_pred --CCCCcEEEecCCeEEe
Q psy16243 399 --GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 --~~glp~~IvRp~~v~G 414 (782)
..++.+++++||.+-.
T Consensus 171 ~~~~~i~v~~i~pg~~~t 188 (245)
T PRK12937 171 LRGRGITVNAVAPGPVAT 188 (245)
T ss_pred hhhcCeEEEEEEeCCccC
Confidence 2478889999987654
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=2e-08 Score=106.45 Aligned_cols=156 Identities=19% Similarity=0.151 Sum_probs=109.5
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+++++|||..+..|..+ .+.|.. .+.+|+++.|.... ..
T Consensus 4 ~~~vlVtGasg~iG~~~----a~~l~~---------------~g~~V~~~~r~~~~------~~---------------- 42 (270)
T PRK06179 4 SKVALVTGASSGIGRAT----AEKLAR---------------AGYRVFGTSRNPAR------AA---------------- 42 (270)
T ss_pred CCEEEEecCCCHHHHHH----HHHHHH---------------CCCEEEEEeCChhh------cc----------------
Confidence 57899999655444333 233322 25678888875321 00
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
...+++++.+|++++ ++++++++. +|++||+|+.... .+..+..+++|+.|+.++++.+
T Consensus 43 -~~~~~~~~~~D~~d~------~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~ 115 (270)
T PRK06179 43 -PIPGVELLELDVTDD------ASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAV 115 (270)
T ss_pred -ccCCCeeEEeecCCH------HHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 013678899999998 777777664 6999999997532 1345678899999999998885
Q ss_pred ----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 320 ----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 320 ----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
++. +..++|++||.+.+... +....|+.||...|.+.
T Consensus 116 ~~~~~~~-~~~~iv~isS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~ 156 (270)
T PRK06179 116 LPHMRAQ-GSGRIINISSVLGFLPA--------------------------------------PYMALYAASKHAVEGYS 156 (270)
T ss_pred HHHHHhc-CCceEEEECCccccCCC--------------------------------------CCccHHHHHHHHHHHHH
Confidence 333 67899999997654321 01157999999999987
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
... ..|+++++++||.+.++.
T Consensus 157 ~~l~~el~~~gi~v~~v~pg~~~t~~ 182 (270)
T PRK06179 157 ESLDHEVRQFGIRVSLVEPAYTKTNF 182 (270)
T ss_pred HHHHHHHhhhCcEEEEEeCCCccccc
Confidence 765 358999999999988753
|
|
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.9e-08 Score=99.80 Aligned_cols=263 Identities=17% Similarity=0.118 Sum_probs=172.6
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.|+.+|||.+|+.|+++. +.|+.+ +++|.-++|..++.. ..|++.+...+. .
T Consensus 28 rkvALITGItGQDGSYLa----EfLL~K---------------gYeVHGiiRRsSsFN-T~RIeHlY~nP~-----~--- 79 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLA----EFLLSK---------------GYEVHGIIRRSSSFN-TARIEHLYSNPH-----T--- 79 (376)
T ss_pred ceEEEEecccCCCchHHH----HHHHhC---------------CceeeEEEeeccccc-hhhhhhhhcCch-----h---
Confidence 468999999999999882 444433 788898999766543 346655432211 1
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCc--eEEEEcCccc----CchhhHHHHHHhhHHHHHHHHHHHHHcc--CC
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNI--HVVFHCAATV----RFDAHLKVAVSINLRATKALLEMAKEMK--QL 325 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~v--diViH~Aa~v----~f~~~~~~~~~~Nv~gt~~Lle~a~~~~--~~ 325 (782)
..-......-||++|. ..+-++++.+ +-|+|+||.. +|+.+. -..++...||.+|+++.+.+. .-
T Consensus 80 h~~~~mkLHYgDmTDs------s~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpe-YTAeVdavGtLRlLdAi~~c~l~~~ 152 (376)
T KOG1372|consen 80 HNGASMKLHYGDMTDS------SCLIKLISTIKPTEVYNLAAQSHVKVSFDLPE-YTAEVDAVGTLRLLDAIRACRLTEK 152 (376)
T ss_pred cccceeEEeeccccch------HHHHHHHhccCchhhhhhhhhcceEEEeeccc-ceeeccchhhhhHHHHHHhcCcccc
Confidence 1224677889999998 7888888865 7899999974 443322 234567789999999988773 22
Q ss_pred ceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEE
Q psy16243 326 KSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVA 405 (782)
Q Consensus 326 ~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~ 405 (782)
-+|-..||...||....++.. +.+|..+. ++|+.+|..+--++..+..... .
T Consensus 153 VrfYQAstSElyGkv~e~PQs------------------------E~TPFyPR---SPYa~aKmy~~WivvNyREAYn-m 204 (376)
T KOG1372|consen 153 VRFYQASTSELYGKVQEIPQS------------------------ETTPFYPR---SPYAAAKMYGYWIVVNYREAYN-M 204 (376)
T ss_pred eeEEecccHhhcccccCCCcc------------------------cCCCCCCC---ChhHHhhhhheEEEEEhHHhhc-c
Confidence 478889999989865433322 11444444 8999999877666554422111 2
Q ss_pred EecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCce-eeeccCCCccccccchhHHHHH
Q psy16243 406 MVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLL-RSMHADPELVADMVPADNVINC 484 (782)
Q Consensus 406 IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~VpVDdva~a 484 (782)
..+.|+.+- .+.|..|. .--....+.-+..+..|.. ....|+.+..+||=|..|-++|
T Consensus 205 fAcNGILFN-HESPRRGe--------------------nFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEA 263 (376)
T KOG1372|consen 205 FACNGILFN-HESPRRGE--------------------NFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEA 263 (376)
T ss_pred eeeccEeec-CCCCcccc--------------------chhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHH
Confidence 233455553 23443321 0000112223333444543 4567899999999999999999
Q ss_pred HHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 485 IISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 485 ii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
++..+.+. ...-|-+..+ +..+.+|+.+......++
T Consensus 264 MW~mLQ~d--------------------------~PdDfViATg--e~hsVrEF~~~aF~~ig~ 299 (376)
T KOG1372|consen 264 MWLMLQQD--------------------------SPDDFVIATG--EQHSVREFCNLAFAEIGE 299 (376)
T ss_pred HHHHHhcC--------------------------CCCceEEecC--CcccHHHHHHHHHHhhCc
Confidence 99998653 3456778888 889999999988776663
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.7e-08 Score=107.40 Aligned_cols=196 Identities=15% Similarity=0.076 Sum_probs=109.3
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|... ...+..+++..
T Consensus 5 ~~k~vlVTGas~gIG~~~----a~~L~~---------------~G~~V~~~~r~~~--~~~~~~~~l~~----------- 52 (322)
T PRK07453 5 AKGTVIITGASSGVGLYA----AKALAK---------------RGWHVIMACRNLK--KAEAAAQELGI----------- 52 (322)
T ss_pred CCCEEEEEcCCChHHHHH----HHHHHH---------------CCCEEEEEECCHH--HHHHHHHHhhc-----------
Confidence 478999999655444333 233322 1467888877532 12222222210
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|+++. +++..+++ .+|++||+||.... .+.++..+++|+.|+..+++
T Consensus 53 --~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 124 (322)
T PRK07453 53 --PPDSYTIIHIDLGDL------DSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCN 124 (322)
T ss_pred --cCCceEEEEecCCCH------HHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHH
Confidence 113688899999987 66666554 38999999996321 13456778999999999988
Q ss_pred HHHHc----cC-CceEEEEecceeccCC--C--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHH
Q psy16243 318 MAKEM----KQ-LKSFVHVSTAYSNCRQ--P--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTK 388 (782)
Q Consensus 318 ~a~~~----~~-~~~fV~vST~~v~~~~--~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK 388 (782)
++... +. ..++|++||...+... . ..++. .+.+++........ .... .....+-...+.|+.||
T Consensus 125 ~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~Y~~SK 197 (322)
T PRK07453 125 LLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP-----ADLGDLSGFEAGFK-APIS-MADGKKFKPGKAYKDSK 197 (322)
T ss_pred HHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc-----cchhhhhcchhccc-cccc-ccCccCCCccchhhHhH
Confidence 86532 11 3599999998665321 0 11110 00000000000000 0000 00000001126899999
Q ss_pred HHHHHHHHHc----C--CCCcEEEecCCeEEec
Q psy16243 389 QVAEDMVRRG----G--AGMPVAMVRPSIVIAT 415 (782)
Q Consensus 389 ~~aE~ll~~~----~--~glp~~IvRp~~v~G~ 415 (782)
.+.+.+...+ . .|+.+..+|||.|+++
T Consensus 198 ~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 198 LCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred HHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 9876655544 2 3799999999999764
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.6e-08 Score=106.14 Aligned_cols=157 Identities=16% Similarity=0.219 Sum_probs=104.9
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+..|..+ .+.|.. .+.+|+++.|... .+.++.+
T Consensus 4 ~k~vlItGasggiG~~l----a~~l~~---------------~G~~Vi~~~r~~~------~~~~l~~------------ 46 (277)
T PRK05993 4 KRSILITGCSSGIGAYC----ARALQS---------------DGWRVFATCRKEE------DVAALEA------------ 46 (277)
T ss_pred CCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEECCHH------HHHHHHH------------
Confidence 57899999654444333 233321 2567888888532 1221110
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc--------CceEEEEcCcccCch-------hhHHHHHHhhHHH----HHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD--------NIHVVFHCAATVRFD-------AHLKVAVSINLRA----TKA 314 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~--------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~g----t~~ 314 (782)
.++..+.+|++++ ++++.+++ .+|+|||+|+..... +..+..+++|+.| ++.
T Consensus 47 ---~~~~~~~~Dl~d~------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 117 (277)
T PRK05993 47 ---EGLEAFQLDYAEP------ESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRR 117 (277)
T ss_pred ---CCceEEEccCCCH------HHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHH
Confidence 1467889999987 55555443 469999999864321 3345678999999 666
Q ss_pred HHHHHHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 315 LLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 315 Lle~a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+++.+++. +..++|++||.+.+... +....|+.||+..|.+
T Consensus 118 ~l~~~~~~-~~g~iv~isS~~~~~~~--------------------------------------~~~~~Y~asK~a~~~~ 158 (277)
T PRK05993 118 VIPVMRKQ-GQGRIVQCSSILGLVPM--------------------------------------KYRGAYNASKFAIEGL 158 (277)
T ss_pred HHHHHhhc-CCCEEEEECChhhcCCC--------------------------------------CccchHHHHHHHHHHH
Confidence 77777665 56799999997543210 0116899999999999
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
++.. ..|+.+++++||.+-.+
T Consensus 159 ~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 159 SLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred HHHHHHHhhhhCCEEEEEecCCccCc
Confidence 8765 35899999999988653
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.2e-07 Score=98.54 Aligned_cols=165 Identities=15% Similarity=0.142 Sum_probs=106.5
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.|+++|||..+..|..+ .+.|.. .+.+|+++.|... ....+..... .
T Consensus 2 ~k~vlItG~s~~iG~~l----a~~l~~---------------~g~~vi~~~r~~~-~~~~~~~~~~-------------~ 48 (245)
T PRK12824 2 KKIALVTGAKRGIGSAI----ARELLN---------------DGYRVIATYFSGN-DCAKDWFEEY-------------G 48 (245)
T ss_pred CCEEEEeCCCchHHHHH----HHHHHH---------------cCCEEEEEeCCcH-HHHHHHHHHh-------------h
Confidence 36899999544444333 223321 1467888888743 1122211111 0
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH-
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM- 318 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~- 318 (782)
....++.++.+|++++ +++.++++ .+|++||+|+.... .+.++..+++|+.|+.++...
T Consensus 49 ~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 122 (245)
T PRK12824 49 FTEDQVRLKELDVTDT------EECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPL 122 (245)
T ss_pred ccCCeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 1124688999999987 66555544 47999999986431 234556788999999888554
Q ss_pred ---HHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 ---AKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 ---a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+++. +..++|++||...+... +. ...|+.+|...+.++
T Consensus 123 ~~~~~~~-~~~~iv~iss~~~~~~~---------------------------------~~-----~~~Y~~sK~a~~~~~ 163 (245)
T PRK12824 123 FAAMCEQ-GYGRIINISSVNGLKGQ---------------------------------FG-----QTNYSAAKAGMIGFT 163 (245)
T ss_pred HHHHHHh-CCeEEEEECChhhccCC---------------------------------CC-----ChHHHHHHHHHHHHH
Confidence 4443 56799999997654321 00 146999999888887
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.. ..++++.+++|+.+.++.
T Consensus 164 ~~l~~~~~~~~i~v~~v~pg~~~t~~ 189 (245)
T PRK12824 164 KALASEGARYGITVNCIAPGYIATPM 189 (245)
T ss_pred HHHHHHHHHhCeEEEEEEEcccCCcc
Confidence 665 348999999999887653
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.3e-08 Score=102.87 Aligned_cols=163 Identities=15% Similarity=0.185 Sum_probs=107.6
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... .+...+..
T Consensus 13 ~~~k~vlItGas~~IG~~l----a~~l~~---------------~G~~Vi~~~r~~~~---~~~~~~~~----------- 59 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAI----AELFAA---------------KGARVALLDRSEDV---AEVAAQLL----------- 59 (255)
T ss_pred CCCCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHHH---HHHHHHhh-----------
Confidence 4578999999655444333 233322 25677877775431 11111110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
..++..+.+|++++ ++++.+++ .+|+|||+|+..... +.++..+++|+.|+.++++
T Consensus 60 ----~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 129 (255)
T PRK06841 60 ----GGNAKGLVCDVSDS------QSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQ 129 (255)
T ss_pred ----CCceEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHH
Confidence 12566889999987 66665554 569999999975421 3345678999999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+..++|++||....... + ....|+.||...|.+
T Consensus 130 ~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------------------~-----~~~~Y~~sK~a~~~~ 171 (255)
T PRK06841 130 AVGRHMIAAGGGKIVNLASQAGVVAL---------------------------------E-----RHVAYCASKAGVVGM 171 (255)
T ss_pred HHHHHHHhcCCceEEEEcchhhccCC---------------------------------C-----CCchHHHHHHHHHHH
Confidence 87642 245789999997542110 0 015799999998888
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..++||.+..+
T Consensus 172 ~~~la~e~~~~gi~v~~v~pg~v~t~ 197 (255)
T PRK06841 172 TKVLALEWGPYGITVNAISPTVVLTE 197 (255)
T ss_pred HHHHHHHHHhhCeEEEEEEeCcCcCc
Confidence 7765 24889999999887654
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.5e-08 Score=105.91 Aligned_cols=181 Identities=15% Similarity=0.116 Sum_probs=107.0
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
|...+|+++|||..+.+|..+ .+.|... +.+|+++.|... ...+..+++...
T Consensus 12 ~~~~~k~vlItGas~gIG~~~----a~~l~~~---------------G~~vi~~~r~~~--~~~~~~~~l~~~------- 63 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYET----AAALAAK---------------GAHVVLAVRNLD--KGKAAAARITAA------- 63 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHH----HHHHHHC---------------CCEEEEEeCCHH--HHHHHHHHHHHh-------
Confidence 456689999999655544443 2333221 457888887532 122222222110
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-----hhHHHHHHhhHHH----HH
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-----AHLKVAVSINLRA----TK 313 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-----~~~~~~~~~Nv~g----t~ 313 (782)
.+ ..++.++.+|+++. +++..+++ .+|+|||+||..... +..+..+++|+.| ++
T Consensus 64 --~~--~~~~~~~~~Dl~d~------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 133 (306)
T PRK06197 64 --TP--GADVTLQELDLTSL------ASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTG 133 (306)
T ss_pred --CC--CCceEEEECCCCCH------HHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHH
Confidence 01 13678899999987 66665544 479999999964322 2345678899999 66
Q ss_pred HHHHHHHHccCCceEEEEecceeccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 314 ALLEMAKEMKQLKSFVHVSTAYSNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 314 ~Lle~a~~~~~~~~fV~vST~~v~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+++.+++. +..++|++||........ ..++...+ .+ ......|+.||...+
T Consensus 134 ~ll~~l~~~-~~~~iV~vSS~~~~~~~~~~~~~~~~~-----------------------~~---~~~~~~Y~~SK~a~~ 186 (306)
T PRK06197 134 LLLDRLLPV-PGSRVVTVSSGGHRIRAAIHFDDLQWE-----------------------RR---YNRVAAYGQSKLANL 186 (306)
T ss_pred HHHHHHhhC-CCCEEEEECCHHHhccCCCCccccCcc-----------------------cC---CCcHHHHHHHHHHHH
Confidence 667666654 457999999986432111 11110000 00 011268999999999
Q ss_pred HHHHHc-----CCCCcEEE--ecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAM--VRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~I--vRp~~v~G~ 415 (782)
.+.... ..++++.+ +.||.|..+
T Consensus 187 ~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 187 LFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred HHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 888765 23555444 368776543
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.81 E-value=9e-08 Score=99.32 Aligned_cols=116 Identities=16% Similarity=0.135 Sum_probs=87.0
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc---CceEEEEcCcc-cCc-------hhhHHHHHHhhHHHHHHHHHHHHHc---
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD---NIHVVFHCAAT-VRF-------DAHLKVAVSINLRATKALLEMAKEM--- 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~---~vdiViH~Aa~-v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~--- 322 (782)
.++.++.+|++++ +++.++++ .+|+|||+|+. ... .+.+...+++|+.|+.++++++...
T Consensus 49 ~~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 122 (238)
T PRK08264 49 PRVVPLQLDVTDP------ASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAA 122 (238)
T ss_pred CceEEEEecCCCH------HHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 3688899999987 67777766 47999999987 221 1345567889999999999986532
Q ss_pred cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----
Q psy16243 323 KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG---- 398 (782)
Q Consensus 323 ~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~---- 398 (782)
.+..+||++||...+... +..+.|+.+|..+|.+....
T Consensus 123 ~~~~~~v~~sS~~~~~~~--------------------------------------~~~~~y~~sK~a~~~~~~~l~~~~ 164 (238)
T PRK08264 123 NGGGAIVNVLSVLSWVNF--------------------------------------PNLGTYSASKAAAWSLTQALRAEL 164 (238)
T ss_pred cCCCEEEEEcChhhccCC--------------------------------------CCchHhHHHHHHHHHHHHHHHHHh
Confidence 246789999998654321 01167999999999888765
Q ss_pred -CCCCcEEEecCCeEEecc
Q psy16243 399 -GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 399 -~~glp~~IvRp~~v~G~~ 416 (782)
..+++++++||+.+.++.
T Consensus 165 ~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 165 APQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred hhcCeEEEEEeCCcccccc
Confidence 248999999999987653
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=5.1e-08 Score=104.90 Aligned_cols=169 Identities=19% Similarity=0.151 Sum_probs=110.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|... +.+|++..|....... +.+.+...
T Consensus 47 ~~~k~vlITGas~gIG~ai----a~~L~~~---------------G~~Vi~~~~~~~~~~~-~~~~~~~~---------- 96 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAA----AIAYARE---------------GADVAISYLPVEEEDA-QDVKKIIE---------- 96 (294)
T ss_pred cCCCEEEEECCCCcHHHHH----HHHHHHC---------------CCEEEEecCCcchhhH-HHHHHHHH----------
Confidence 5578999999655555444 2334322 4567666554322221 22222111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----c----hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----F----DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~Ll 316 (782)
....++.++.+|++++ +++.++++ .+|+++|+|+... + .+.+.+.+++|+.|+..++
T Consensus 97 --~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 168 (294)
T PRK07985 97 --ECGRKAVLLPGDLSDE------KFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLT 168 (294)
T ss_pred --HcCCeEEEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 0113577899999987 55555443 4699999998532 1 1345678999999999999
Q ss_pred HHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 317 EMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 317 e~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+++... ..-.++|++||...+.... . ...|+.||...+.++
T Consensus 169 ~~~~~~m~~~g~iv~iSS~~~~~~~~---------------------------------~-----~~~Y~asKaal~~l~ 210 (294)
T PRK07985 169 QEAIPLLPKGASIITTSSIQAYQPSP---------------------------------H-----LLDYAATKAAILNYS 210 (294)
T ss_pred HHHHHhhhcCCEEEEECCchhccCCC---------------------------------C-----cchhHHHHHHHHHHH
Confidence 987642 2235899999987653210 0 157999999999887
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.. ..|+++.+++||.|.++.
T Consensus 211 ~~la~el~~~gIrvn~i~PG~v~t~~ 236 (294)
T PRK07985 211 RGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_pred HHHHHHHhHhCcEEEEEECCcCcccc
Confidence 765 258999999999998764
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.7e-07 Score=100.84 Aligned_cols=165 Identities=15% Similarity=0.121 Sum_probs=107.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++.+
T Consensus 38 ~~~k~vlItGasggIG~~l----a~~La~---------------~G~~Vi~~~R~~~--~l~~~~~~l~~---------- 86 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAA----AEQFAR---------------RGATVVAVARRED--LLDAVADRITR---------- 86 (293)
T ss_pred CCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEECCHH--HHHHHHHHHHh----------
Confidence 4578999999655444433 223321 2567888888632 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch---------hhHHHHHHhhHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD---------AHLKVAVSINLRATKAL 315 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~---------~~~~~~~~~Nv~gt~~L 315 (782)
...++.++.+|++++ +++.++++ .+|++||+||..... +..+..+++|+.|+..+
T Consensus 87 ---~~~~~~~~~~Dl~d~------~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l 157 (293)
T PRK05866 87 ---AGGDAMAVPCDLSDL------DAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRL 157 (293)
T ss_pred ---cCCcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHH
Confidence 013577899999987 66666665 689999999864221 23456788999998888
Q ss_pred HHHHH----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 316 LEMAK----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 316 le~a~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
++.+. +. +..++|++||.++..... | ..+.|+.||+..
T Consensus 158 ~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------------------------------p-----~~~~Y~asKaal 199 (293)
T PRK05866 158 IRGLAPGMLER-GDGHIINVATWGVLSEAS--------------------------------P-----LFSVYNASKAAL 199 (293)
T ss_pred HHHHHHHHHhc-CCcEEEEECChhhcCCCC--------------------------------C-----CcchHHHHHHHH
Confidence 77643 33 557999999975543110 0 116799999999
Q ss_pred HHHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 392 EDMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 392 E~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+.++... ..++.+.+++||.+-.
T Consensus 200 ~~l~~~la~e~~~~gI~v~~v~pg~v~T 227 (293)
T PRK05866 200 SAVSRVIETEWGDRGVHSTTLYYPLVAT 227 (293)
T ss_pred HHHHHHHHHHhcccCcEEEEEEcCcccC
Confidence 9887765 3489999999987654
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.1e-07 Score=98.92 Aligned_cols=159 Identities=14% Similarity=0.150 Sum_probs=106.9
Q ss_pred CeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCcc
Q psy16243 175 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPH 254 (782)
Q Consensus 175 k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~ 254 (782)
++++|||..+..|..+ .+.|.. .+.+|+++.|... +++++.+
T Consensus 2 ~~vlItGas~giG~~l----a~~L~~---------------~G~~V~~~~r~~~------~~~~~~~------------- 43 (240)
T PRK06101 2 TAVLITGATSGIGKQL----ALDYAK---------------QGWQVIACGRNQS------VLDELHT------------- 43 (240)
T ss_pred cEEEEEcCCcHHHHHH----HHHHHh---------------CCCEEEEEECCHH------HHHHHHH-------------
Confidence 6799999655444433 233322 2567888888532 2222211
Q ss_pred cccceeEEecCCCCCCCCCCHHhHHHHhcC----ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 255 YLSKMVAVTGDCLKPGVGINSEDRQTLVDN----IHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 255 ~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~----vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
...++.++.+|++++ +++++++++ .|+++|+|+...+ .+..+..+++|+.|+.++++.+...
T Consensus 44 ~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 117 (240)
T PRK06101 44 QSANIFTLAFDVTDH------PGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHL 117 (240)
T ss_pred hcCCCeEEEeeCCCH------HHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 013578899999987 777777765 4788999975422 1234568999999999999998752
Q ss_pred cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----
Q psy16243 323 KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG---- 398 (782)
Q Consensus 323 ~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~---- 398 (782)
.+-.++|++||....... + ....|+.||...|.+.+..
T Consensus 118 ~~~~~iv~isS~~~~~~~---------------------------------~-----~~~~Y~asK~a~~~~~~~l~~e~ 159 (240)
T PRK06101 118 SCGHRVVIVGSIASELAL---------------------------------P-----RAEAYGASKAAVAYFARTLQLDL 159 (240)
T ss_pred hcCCeEEEEechhhccCC---------------------------------C-----CCchhhHHHHHHHHHHHHHHHHH
Confidence 233578999886422110 0 0157999999999988754
Q ss_pred -CCCCcEEEecCCeEEec
Q psy16243 399 -GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -~~glp~~IvRp~~v~G~ 415 (782)
..|++++++|||.+.++
T Consensus 160 ~~~gi~v~~v~pg~i~t~ 177 (240)
T PRK06101 160 RPKGIEVVTVFPGFVATP 177 (240)
T ss_pred HhcCceEEEEeCCcCCCC
Confidence 35899999999999864
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1e-07 Score=101.05 Aligned_cols=163 Identities=15% Similarity=0.094 Sum_probs=104.5
Q ss_pred CeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCcc
Q psy16243 175 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPH 254 (782)
Q Consensus 175 k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~ 254 (782)
++++|||.++..|..+ .+.|... +.+|++..|... ...+...++..
T Consensus 1 ~~vlVtGasggIG~~l----a~~l~~~---------------g~~V~~~~r~~~--~~~~~~~~l~~------------- 46 (270)
T PRK05650 1 NRVMITGAASGLGRAI----ALRWARE---------------GWRLALADVNEE--GGEETLKLLRE------------- 46 (270)
T ss_pred CEEEEecCCChHHHHH----HHHHHHC---------------CCEEEEEeCCHH--HHHHHHHHHHh-------------
Confidence 4689999655555444 2333221 567777777532 22222222211
Q ss_pred cccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHH--
Q psy16243 255 YLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEM-- 318 (782)
Q Consensus 255 ~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~-- 318 (782)
...++.++.+|++++ +++..+++ .+|+|||+|+..... +.++..+++|+.|+..+.+.
T Consensus 47 ~~~~~~~~~~D~~~~------~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 120 (270)
T PRK05650 47 AGGDGFYQRCDVRDY------SQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFL 120 (270)
T ss_pred cCCceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence 123677899999987 56665554 589999999975421 34456788998888776665
Q ss_pred --HHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 319 --AKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 319 --a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
+++. +..++|++||..+..... ....|+.||+..+.+..
T Consensus 121 ~~~~~~-~~~~iv~vsS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~ 161 (270)
T PRK05650 121 PLFKRQ-KSGRIVNIASMAGLMQGP--------------------------------------AMSSYNVAKAGVVALSE 161 (270)
T ss_pred HHHHhC-CCCEEEEECChhhcCCCC--------------------------------------CchHHHHHHHHHHHHHH
Confidence 4443 567999999986543210 01579999998666554
Q ss_pred Hc-----CCCCcEEEecCCeEEecc
Q psy16243 397 RG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+ ..|+.+.+++||.+..+.
T Consensus 162 ~l~~e~~~~gi~v~~v~Pg~v~t~~ 186 (270)
T PRK05650 162 TLLVELADDEIGVHVVCPSFFQTNL 186 (270)
T ss_pred HHHHHhcccCcEEEEEecCccccCc
Confidence 43 358999999999987653
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.6e-07 Score=97.99 Aligned_cols=116 Identities=16% Similarity=0.093 Sum_probs=82.4
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ +++..+++ .+|+|||+|+..... +.....+++|+.|+.++++.+...
T Consensus 53 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 126 (248)
T PRK08251 53 IKVAVAALDVNDH------DQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEI 126 (248)
T ss_pred ceEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3688999999987 66655544 579999999864321 334567889999999988876421
Q ss_pred ---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 ---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 ---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+..++|++||........ .....|+.||...+.+....
T Consensus 127 ~~~~~~~~iv~~sS~~~~~~~~-------------------------------------~~~~~Y~~sK~a~~~~~~~l~ 169 (248)
T PRK08251 127 FREQGSGHLVLISSVSAVRGLP-------------------------------------GVKAAYAASKAGVASLGEGLR 169 (248)
T ss_pred HHhcCCCeEEEEeccccccCCC-------------------------------------CCcccHHHHHHHHHHHHHHHH
Confidence 2567899999975432100 00157999999988887655
Q ss_pred ----CCCCcEEEecCCeEEec
Q psy16243 399 ----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G~ 415 (782)
..++++++++||.+.++
T Consensus 170 ~~~~~~~i~v~~v~pg~v~t~ 190 (248)
T PRK08251 170 AELAKTPIKVSTIEPGYIRSE 190 (248)
T ss_pred HHhcccCcEEEEEecCcCcch
Confidence 24788999999888653
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=6e-08 Score=102.11 Aligned_cols=165 Identities=18% Similarity=0.235 Sum_probs=109.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ .+.|.. .+.+|.++.|..+.+ .+.+...
T Consensus 13 l~~k~vlItGas~gIG~~i----a~~l~~---------------~G~~v~~~~~~~~~~----~~~~~~~---------- 59 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGY----AVALAK---------------AGADIIITTHGTNWD----ETRRLIE---------- 59 (258)
T ss_pred CCCCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEeCCcHHH----HHHHHHH----------
Confidence 4579999999655444433 233322 256777777763222 2222111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
....++.++.+|++++ ++...+++ .+|++||+|+.... .+.++..+++|+.|+..+.+
T Consensus 60 --~~~~~~~~~~~D~~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 131 (258)
T PRK06935 60 --KEGRKVTFVQVDLTKP------ESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQ 131 (258)
T ss_pred --hcCCceEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHH
Confidence 0113688899999987 66666655 57999999987432 13455678899999887776
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+..++|++||...+.... ....|+.+|...|.+
T Consensus 132 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~ 173 (258)
T PRK06935 132 AVAKVMAKQGSGKIINIASMLSFQGGK--------------------------------------FVPAYTASKHGVAGL 173 (258)
T ss_pred HHHHHHHhcCCeEEEEECCHHhccCCC--------------------------------------CchhhHHHHHHHHHH
Confidence 65421 2457899999986542210 115799999999999
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
++.. ..|+.+.+++||.+..+
T Consensus 174 ~~~la~e~~~~gi~v~~i~PG~v~t~ 199 (258)
T PRK06935 174 TKAFANELAAYNIQVNAIAPGYIKTA 199 (258)
T ss_pred HHHHHHHhhhhCeEEEEEEecccccc
Confidence 8776 24899999999988754
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=8.1e-08 Score=100.81 Aligned_cols=111 Identities=15% Similarity=0.123 Sum_probs=81.1
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH----HHHccCC
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM----AKEMKQL 325 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~----a~~~~~~ 325 (782)
++.++.+|++++ +++..+++ ++|+|||+|+.... .+.++..+++|+.|+..+.+. +.+. +.
T Consensus 52 ~~~~~~~D~~~~------~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~ 124 (257)
T PRK09291 52 ALRVEKLDLTDA------IDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GK 124 (257)
T ss_pred cceEEEeeCCCH------HHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CC
Confidence 588899999998 67777766 79999999986431 133456788999988776654 3343 45
Q ss_pred ceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CC
Q psy16243 326 KSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GA 400 (782)
Q Consensus 326 ~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~ 400 (782)
+++|++||....... +....|+.||...|.+.... ..
T Consensus 125 ~~iv~~SS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~ 166 (257)
T PRK09291 125 GKVVFTSSMAGLITG--------------------------------------PFTGAYCASKHALEAIAEAMHAELKPF 166 (257)
T ss_pred ceEEEEcChhhccCC--------------------------------------CCcchhHHHHHHHHHHHHHHHHHHHhc
Confidence 899999997532210 01167999999999887654 35
Q ss_pred CCcEEEecCCeEE
Q psy16243 401 GMPVAMVRPSIVI 413 (782)
Q Consensus 401 glp~~IvRp~~v~ 413 (782)
|++++++|||.+.
T Consensus 167 gi~~~~v~pg~~~ 179 (257)
T PRK09291 167 GIQVATVNPGPYL 179 (257)
T ss_pred CcEEEEEecCccc
Confidence 8999999998764
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=6.8e-08 Score=100.83 Aligned_cols=161 Identities=17% Similarity=0.196 Sum_probs=105.5
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..++.
T Consensus 5 ~~k~vlItGasg~iG~~l----a~~l~~---------------~g~~v~~~~r~~~--~~~~~~~~~------------- 50 (249)
T PRK06500 5 QGKTALITGGTSGIGLET----ARQFLA---------------EGARVAITGRDPA--SLEAARAEL------------- 50 (249)
T ss_pred CCCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEecCCHH--HHHHHHHHh-------------
Confidence 468999999655444433 233322 1457777777532 111111111
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHh-------cCceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLV-------DNIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~-------~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~ 318 (782)
..++.++.+|+++. ++...++ ..+|+|||+|+...+. +.++..+++|+.|+.+++++
T Consensus 51 ---~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 121 (249)
T PRK06500 51 ---GESALVIRADAGDV------AAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQA 121 (249)
T ss_pred ---CCceEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 12577889999886 5444433 3579999999875421 34456889999999999999
Q ss_pred HHHc-cCCceEEEEecce-eccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 319 AKEM-KQLKSFVHVSTAY-SNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 319 a~~~-~~~~~fV~vST~~-v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
+... ....++|++||.. .++.+ ..+.|+.+|...|.+++
T Consensus 122 ~~~~~~~~~~~i~~~S~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~ 162 (249)
T PRK06500 122 LLPLLANPASIVLNGSINAHIGMP---------------------------------------NSSVYAASKAALLSLAK 162 (249)
T ss_pred HHHHHhcCCEEEEEechHhccCCC---------------------------------------CccHHHHHHHHHHHHHH
Confidence 8742 2335677777753 23221 01689999999999996
Q ss_pred Hc-----CCCCcEEEecCCeEEec
Q psy16243 397 RG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+ ..|+++.++|||.+.+|
T Consensus 163 ~la~e~~~~gi~v~~i~pg~~~t~ 186 (249)
T PRK06500 163 TLSGELLPRGIRVNAVSPGPVQTP 186 (249)
T ss_pred HHHHHhhhcCeEEEEEeeCcCCCH
Confidence 55 34899999999999876
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.2e-07 Score=96.07 Aligned_cols=110 Identities=14% Similarity=0.108 Sum_probs=81.3
Q ss_pred eEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHH----Hc
Q psy16243 260 VAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAK----EM 322 (782)
Q Consensus 260 ~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~----~~ 322 (782)
.++.+|++++ ++++++++ ++|+|||+|+..... +.....+++|+.|+.++.+.+. +.
T Consensus 44 ~~~~~D~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 117 (234)
T PRK07577 44 ELFACDLADI------EQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR 117 (234)
T ss_pred eEEEeeCCCH------HHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 3578999987 66666555 479999999975431 3344678899999888877653 33
Q ss_pred cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----
Q psy16243 323 KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG---- 398 (782)
Q Consensus 323 ~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~---- 398 (782)
+..++|++||.+.++.+. ...|+.||...|.++...
T Consensus 118 -~~~~iv~~sS~~~~~~~~---------------------------------------~~~Y~~sK~a~~~~~~~~a~e~ 157 (234)
T PRK07577 118 -EQGRIVNICSRAIFGALD---------------------------------------RTSYSAAKSALVGCTRTWALEL 157 (234)
T ss_pred -CCcEEEEEccccccCCCC---------------------------------------chHHHHHHHHHHHHHHHHHHHH
Confidence 567999999987554311 167999999999888764
Q ss_pred -CCCCcEEEecCCeEEec
Q psy16243 399 -GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -~~glp~~IvRp~~v~G~ 415 (782)
..|+.++++|||.+..+
T Consensus 158 ~~~gi~v~~i~pg~~~t~ 175 (234)
T PRK07577 158 AEYGITVNAVAPGPIETE 175 (234)
T ss_pred HhhCcEEEEEecCcccCc
Confidence 34899999999988754
|
|
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.2e-08 Score=98.71 Aligned_cols=206 Identities=20% Similarity=0.212 Sum_probs=136.0
Q ss_pred eEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccC-ch-hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecce
Q psy16243 260 VAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVR-FD-AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAY 335 (782)
Q Consensus 260 ~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~-f~-~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~ 335 (782)
-++-.||-|. ..++++.- .+|..+|..|..+ +. .+..-+.++|+.|..|+++.|++. +++-|| -||+.
T Consensus 90 PyIy~DILD~------K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~iFV-PSTIG 161 (366)
T KOG2774|consen 90 PYIYLDILDQ------KSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLKVFV-PSTIG 161 (366)
T ss_pred Cchhhhhhcc------ccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-CeeEee-ccccc
Confidence 3566677665 45556543 4799999987643 22 334457889999999999999997 666554 58999
Q ss_pred eccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCc-cCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecCCeE
Q psy16243 336 SNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGI-VDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIV 412 (782)
Q Consensus 336 v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~-~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp~~v 412 (782)
++|..++-.. +|.. +......||-||.-||-+-..+ .-|+..-.+|.+.+
T Consensus 162 AFGPtSPRNP---------------------------TPdltIQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~ 214 (366)
T KOG2774|consen 162 AFGPTSPRNP---------------------------TPDLTIQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGI 214 (366)
T ss_pred ccCCCCCCCC---------------------------CCCeeeecCceeechhHHHHHHHHHHHHhhcCccceecccCcc
Confidence 9987542111 1111 1112278999999999888776 34888889998877
Q ss_pred EeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhc
Q psy16243 413 IATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNV 492 (782)
Q Consensus 413 ~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 492 (782)
.+... ||. |-.| + ..+++..+.+......+-.++....+.+..|+-.+++..+...
T Consensus 215 is~~~---pgg------------------gttd--y-a~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~ 270 (366)
T KOG2774|consen 215 ISATK---PGG------------------GTTD--Y-AIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAAD 270 (366)
T ss_pred cccCC---CCC------------------Ccch--h-HHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCC
Confidence 76422 221 1111 1 1133444443333334556788999999999999998877654
Q ss_pred cccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 493 HQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
.+. -..++||++. -..|-+|++..+.+.....
T Consensus 271 ~~~----------------------lkrr~ynvt~---~sftpee~~~~~~~~~p~~ 302 (366)
T KOG2774|consen 271 SQS----------------------LKRRTYNVTG---FSFTPEEIADAIRRVMPGF 302 (366)
T ss_pred HHH----------------------hhhheeeece---eccCHHHHHHHHHhhCCCc
Confidence 221 3467999987 4678899999998876543
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.1e-07 Score=99.60 Aligned_cols=115 Identities=13% Similarity=0.191 Sum_probs=86.4
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++.++.+|++++ +++++++++ +|+|||+|+.... .+.+...+++|+.++..+++.+...
T Consensus 49 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 122 (252)
T PRK08220 49 PFATFVLDVSDA------AAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQF 122 (252)
T ss_pred ceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 678899999987 677776653 7999999997542 1345578899999999999987532
Q ss_pred --cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC-
Q psy16243 323 --KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG- 399 (782)
Q Consensus 323 --~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~- 399 (782)
.+..++|++||....... +....|+.||...|.+++...
T Consensus 123 ~~~~~g~iv~~ss~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~~la~ 164 (252)
T PRK08220 123 RRQRSGAIVTVGSNAAHVPR--------------------------------------IGMAAYGASKAALTSLAKCVGL 164 (252)
T ss_pred HhCCCCEEEEECCchhccCC--------------------------------------CCCchhHHHHHHHHHHHHHHHH
Confidence 234689999997543210 011679999999999987662
Q ss_pred ----CCCcEEEecCCeEEecc
Q psy16243 400 ----AGMPVAMVRPSIVIATN 416 (782)
Q Consensus 400 ----~glp~~IvRp~~v~G~~ 416 (782)
.++++.+++|+.+.++.
T Consensus 165 e~~~~~i~v~~i~pg~v~t~~ 185 (252)
T PRK08220 165 ELAPYGVRCNVVSPGSTDTDM 185 (252)
T ss_pred HhhHhCeEEEEEecCcCcchh
Confidence 58999999999998864
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.3e-07 Score=98.51 Aligned_cols=116 Identities=17% Similarity=0.156 Sum_probs=83.0
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccCch--------hhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVRFD--------AHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~f~--------~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
++..+.+|++++ +++++++++ +|+|||+|+..... +..+..+++|+.|+..+++.+...
T Consensus 52 ~~~~~~~D~~d~------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 125 (247)
T PRK09730 52 KAFVLQADISDE------NQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKR 125 (247)
T ss_pred eEEEEEccCCCH------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 577899999998 677766654 58999999864211 234567899999998887765432
Q ss_pred ------cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 323 ------KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 323 ------~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
++-.+||++||........ .....|+.+|...|.++.
T Consensus 126 ~~~~~~~~~g~~v~~sS~~~~~~~~-------------------------------------~~~~~Y~~sK~~~~~~~~ 168 (247)
T PRK09730 126 MALKHGGSGGAIVNVSSAASRLGAP-------------------------------------GEYVDYAASKGAIDTLTT 168 (247)
T ss_pred HHhcCCCCCcEEEEECchhhccCCC-------------------------------------CcccchHhHHHHHHHHHH
Confidence 1234699999975432110 001469999999998877
Q ss_pred Hc-----CCCCcEEEecCCeEEecc
Q psy16243 397 RG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.. ..+++++++||+.+++|.
T Consensus 169 ~l~~~~~~~~i~v~~i~pg~~~~~~ 193 (247)
T PRK09730 169 GLSLEVAAQGIRVNCVRPGFIYTEM 193 (247)
T ss_pred HHHHHHHHhCeEEEEEEeCCCcCcc
Confidence 54 358999999999999864
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=2e-07 Score=99.01 Aligned_cols=113 Identities=20% Similarity=0.241 Sum_probs=79.5
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++..+.+|++++ ++++++++ .+|++||+|+..... +.....+++|+.|+..+++.+...
T Consensus 51 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~ 124 (273)
T PRK07825 51 LVVGGPLDVTDP------ASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRM 124 (273)
T ss_pred cceEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999987 66544443 469999999864321 235567899999999888775421
Q ss_pred --cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 323 --KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 323 --~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
.+..++|++||....... + ....|+.||...+.+....
T Consensus 125 ~~~~~g~iv~isS~~~~~~~---------------------------------~-----~~~~Y~asKaa~~~~~~~l~~ 166 (273)
T PRK07825 125 VPRGRGHVVNVASLAGKIPV---------------------------------P-----GMATYCASKHAVVGFTDAARL 166 (273)
T ss_pred HhCCCCEEEEEcCccccCCC---------------------------------C-----CCcchHHHHHHHHHHHHHHHH
Confidence 255789999998654221 0 0157999998777665543
Q ss_pred ---CCCCcEEEecCCeEEe
Q psy16243 399 ---GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 ---~~glp~~IvRp~~v~G 414 (782)
..|+++++++|+.+..
T Consensus 167 el~~~gi~v~~v~Pg~v~t 185 (273)
T PRK07825 167 ELRGTGVHVSVVLPSFVNT 185 (273)
T ss_pred HhhccCcEEEEEeCCcCcc
Confidence 3589999999987754
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.1e-07 Score=99.62 Aligned_cols=112 Identities=18% Similarity=0.191 Sum_probs=77.2
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHh--------cCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHH----HHH
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLV--------DNIHVVFHCAATVRF-------DAHLKVAVSINLRATKAL----LEM 318 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~--------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~L----le~ 318 (782)
++..+.+|++++ +++..++ ..+|.++|+|+.... .+.++..+++|+.|+.++ ++.
T Consensus 46 ~~~~~~~D~~~~------~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~ 119 (256)
T PRK08017 46 GFTGILLDLDDP------ESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPA 119 (256)
T ss_pred CCeEEEeecCCH------HHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 356788998876 4443333 346899999986432 133456889999998876 455
Q ss_pred HHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 319 AKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 319 a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
+++. +..++|++||.+...... ..+.|+.||...|.+.+..
T Consensus 120 ~~~~-~~~~iv~~ss~~~~~~~~--------------------------------------~~~~Y~~sK~~~~~~~~~l 160 (256)
T PRK08017 120 MLPH-GEGRIVMTSSVMGLISTP--------------------------------------GRGAYAASKYALEAWSDAL 160 (256)
T ss_pred Hhhc-CCCEEEEEcCcccccCCC--------------------------------------CccHHHHHHHHHHHHHHHH
Confidence 5554 567899999975432110 1167999999999987643
Q ss_pred -----CCCCcEEEecCCeEEe
Q psy16243 399 -----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G 414 (782)
..+++++++|||.+..
T Consensus 161 ~~~~~~~~i~v~~v~pg~~~t 181 (256)
T PRK08017 161 RMELRHSGIKVSLIEPGPIRT 181 (256)
T ss_pred HHHHhhcCCEEEEEeCCCccc
Confidence 4589999999977653
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.3e-07 Score=99.51 Aligned_cols=159 Identities=18% Similarity=0.190 Sum_probs=105.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... .
T Consensus 7 ~~~k~vlItGas~gIG~~i----a~~l~~---------------~G~~v~~~~r~~~~--------~------------- 46 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAAT----VARLLE---------------AGARVVTTARSRPD--------D------------- 46 (260)
T ss_pred CCCCEEEEECCCCchhHHH----HHHHHH---------------CCCEEEEEeCChhh--------h-------------
Confidence 5689999999655444333 233322 25678888775321 0
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh-------cCceEEEEcCcccCc---------hhhHHHHHHhhHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV-------DNIHVVFHCAATVRF---------DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~-------~~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~L 315 (782)
...++.++.+|++++ ++.+.++ ..+|+|||+|+.... .+.++..+++|+.|+.++
T Consensus 47 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 117 (260)
T PRK06523 47 ---LPEGVEFVAADLTTA------EGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRL 117 (260)
T ss_pred ---cCCceeEEecCCCCH------HHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHH
Confidence 012577899999987 5555443 357999999985321 234567889999999888
Q ss_pred HHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 316 LEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 316 le~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
++.+... .+..++|++||........ .....|+.||...|
T Consensus 118 ~~~~~~~~~~~~~g~ii~isS~~~~~~~~-------------------------------------~~~~~Y~~sK~a~~ 160 (260)
T PRK06523 118 DRALLPGMIARGSGVIIHVTSIQRRLPLP-------------------------------------ESTTAYAAAKAALS 160 (260)
T ss_pred HHHHHHHHHhcCCcEEEEEecccccCCCC-------------------------------------CCcchhHHHHHHHH
Confidence 7664321 2446899999976542200 01167999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+++.. ..|+.+.+++||.+..+.
T Consensus 161 ~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~ 189 (260)
T PRK06523 161 TYSKSLSKEVAPKGVRVNTVSPGWIETEA 189 (260)
T ss_pred HHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 888776 248999999999998753
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.2e-07 Score=98.69 Aligned_cols=164 Identities=15% Similarity=0.116 Sum_probs=108.3
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++.+
T Consensus 6 ~k~vlItG~sg~iG~~l----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~------------ 52 (241)
T PRK07454 6 MPRALITGASSGIGKAT----ALAFAK---------------AGWDLALVARSQDA--LEALAAELRS------------ 52 (241)
T ss_pred CCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh------------
Confidence 57899999554444333 233322 25689999886431 2221122111
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a 319 (782)
...++.++.+|++++ +++..+++ .+|+|||+|+..... +..+..+++|+.|+.++++.+
T Consensus 53 -~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 125 (241)
T PRK07454 53 -TGVKAAAYSIDLSNP------EAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAV 125 (241)
T ss_pred -CCCcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHH
Confidence 113688899999987 66555554 479999999864321 345567889999998888775
Q ss_pred HHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 320 KEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 320 ~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
... .+..++|++||...++... ....|+.||...+.+.+
T Consensus 126 ~~~~~~~~~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~~~~~~~~ 167 (241)
T PRK07454 126 LPGMRARGGGLIINVSSIAARNAFP--------------------------------------QWGAYCVSKAALAAFTK 167 (241)
T ss_pred HHHHHhcCCcEEEEEccHHhCcCCC--------------------------------------CccHHHHHHHHHHHHHH
Confidence 321 2457899999987653210 11579999999998876
Q ss_pred Hc-----CCCCcEEEecCCeEEec
Q psy16243 397 RG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~ 415 (782)
.. ..|+++.++|||.+-.+
T Consensus 168 ~~a~e~~~~gi~v~~i~pg~i~t~ 191 (241)
T PRK07454 168 CLAEEERSHGIRVCTITLGAVNTP 191 (241)
T ss_pred HHHHHhhhhCCEEEEEecCcccCC
Confidence 54 34899999999988754
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.73 E-value=5.5e-07 Score=91.10 Aligned_cols=162 Identities=16% Similarity=0.195 Sum_probs=112.7
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||. ++||.++.-+.|.+. +.+|.+.-|. .+|++++... .
T Consensus 5 ~~kv~lITGA----SSGiG~A~A~~l~~~---------------G~~vvl~aRR------~drL~~la~~---------~ 50 (246)
T COG4221 5 KGKVALITGA----SSGIGEATARALAEA---------------GAKVVLAARR------EERLEALADE---------I 50 (246)
T ss_pred CCcEEEEecC----cchHHHHHHHHHHHC---------------CCeEEEEecc------HHHHHHHHHh---------h
Confidence 3689999997 567766656666543 6788888885 3455544321 1
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHh-------cCceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLV-------DNIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~-------~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~ 318 (782)
++ .++.++..|++|+ ++.+.++ ..+|+++|+||...-. +.++.++++|+.|..+...+
T Consensus 51 ~~--~~~~~~~~DVtD~------~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~a 122 (246)
T COG4221 51 GA--GAALALALDVTDR------AAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRA 122 (246)
T ss_pred cc--CceEEEeeccCCH------HHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 11 4788999999998 5544333 3589999999986431 45667999999999998887
Q ss_pred H----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 319 A----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 319 a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
. .+. +--.+|.+||++..-. | +..+.|+.||+....+
T Consensus 123 vLP~m~~r-~~G~IiN~~SiAG~~~--------y------------------------------~~~~vY~ATK~aV~~f 163 (246)
T COG4221 123 VLPGMVER-KSGHIINLGSIAGRYP--------Y------------------------------PGGAVYGATKAAVRAF 163 (246)
T ss_pred hhhHHHhc-CCceEEEecccccccc--------C------------------------------CCCccchhhHHHHHHH
Confidence 3 232 3448999999863211 0 1127899999988877
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.... +.+++++.+-||.|...
T Consensus 164 s~~LR~e~~g~~IRVt~I~PG~v~~~ 189 (246)
T COG4221 164 SLGLRQELAGTGIRVTVISPGLVETT 189 (246)
T ss_pred HHHHHHHhcCCCeeEEEecCceecce
Confidence 6554 46899999999988653
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.9e-07 Score=98.08 Aligned_cols=164 Identities=21% Similarity=0.238 Sum_probs=105.5
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+...++.+
T Consensus 2 ~k~~lItGas~giG~~l----a~~l~~---------------~G~~v~~~~r~~~--~~~~~~~~~~~------------ 48 (256)
T PRK08643 2 SKVALVTGAGQGIGFAI----AKRLVE---------------DGFKVAIVDYNEE--TAQAAADKLSK------------ 48 (256)
T ss_pred CCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHh------------
Confidence 57899999655444433 233322 2567888877532 11111222110
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
...++.++.+|++++ +.+.++++ ++|+|||+|+.... .+..+..+++|+.|+..+++.+
T Consensus 49 -~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 121 (256)
T PRK08643 49 -DGGKAIAVKADVSDR------DQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAA 121 (256)
T ss_pred -cCCeEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 113678899999998 66655554 57999999986422 1345568899999988877776
Q ss_pred HHc----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 320 KEM----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 320 ~~~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
... +.-.++|++||....... + ....|+.+|...|.++
T Consensus 122 ~~~~~~~~~~~~iv~~sS~~~~~~~---------------------------------~-----~~~~Y~~sK~a~~~~~ 163 (256)
T PRK08643 122 QEAFKKLGHGGKIINATSQAGVVGN---------------------------------P-----ELAVYSSTKFAVRGLT 163 (256)
T ss_pred HHHHHhcCCCCEEEEECccccccCC---------------------------------C-----CCchhHHHHHHHHHHH
Confidence 432 223579999987532110 0 0167999999988877
Q ss_pred HHc-----CCCCcEEEecCCeEEec
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.. ..|+.+..++||.+.++
T Consensus 164 ~~la~e~~~~gi~v~~i~Pg~v~t~ 188 (256)
T PRK08643 164 QTAARDLASEGITVNAYAPGIVKTP 188 (256)
T ss_pred HHHHHHhcccCcEEEEEeeCCCcCh
Confidence 665 35899999999988765
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.8e-07 Score=94.88 Aligned_cols=115 Identities=19% Similarity=0.290 Sum_probs=83.0
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ +++..+++ .+|+|||+|+..... +.++..+++|+.|+.++++.+...
T Consensus 55 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 128 (247)
T PRK05565 55 GDAIAVKADVSSE------EDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPY 128 (247)
T ss_pred CeEEEEECCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3688999999998 66665554 689999999975321 334567899999998888876542
Q ss_pred ---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 ---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 ---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+..++|++||........ ....|+.+|...+.++...
T Consensus 129 ~~~~~~~~~v~~sS~~~~~~~~--------------------------------------~~~~y~~sK~a~~~~~~~~~ 170 (247)
T PRK05565 129 MIKRKSGVIVNISSIWGLIGAS--------------------------------------CEVLYSASKGAVNAFTKALA 170 (247)
T ss_pred HHhcCCcEEEEECCHhhccCCC--------------------------------------CccHHHHHHHHHHHHHHHHH
Confidence 2456799999975442210 0146999998877776654
Q ss_pred ----CCCCcEEEecCCeEEec
Q psy16243 399 ----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G~ 415 (782)
..|++++++|||.+..+
T Consensus 171 ~~~~~~gi~~~~v~pg~v~t~ 191 (247)
T PRK05565 171 KELAPSGIRVNAVAPGAIDTE 191 (247)
T ss_pred HHHHHcCeEEEEEEECCccCc
Confidence 35899999999987653
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.6e-07 Score=94.64 Aligned_cols=114 Identities=13% Similarity=0.147 Sum_probs=80.7
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc----------------hhhHHHHHHhhHHHHHH
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF----------------DAHLKVAVSINLRATKA 314 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f----------------~~~~~~~~~~Nv~gt~~ 314 (782)
++.++.+|++++ ++++++++ .+|+|||+|+.... .+.+...+++|+.|+..
T Consensus 55 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 128 (253)
T PRK08217 55 EVRGYAANVTDE------EDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFL 128 (253)
T ss_pred ceEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHH
Confidence 678899999987 55544443 46999999985321 13345677899999988
Q ss_pred HHHHHHH----ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 315 LLEMAKE----MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 315 Lle~a~~----~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
+.+.+.. ...-..+|++||...++... ...|+.||..
T Consensus 129 ~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~---------------------------------------~~~Y~~sK~a 169 (253)
T PRK08217 129 CGREAAAKMIESGSKGVIINISSIARAGNMG---------------------------------------QTNYSASKAG 169 (253)
T ss_pred HHHHHHHHHHhcCCCeEEEEEccccccCCCC---------------------------------------CchhHHHHHH
Confidence 7765432 21234689999876554311 1679999999
Q ss_pred HHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 391 AEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 391 aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.|.+++.. ..+++++.++|+.+.++.
T Consensus 170 ~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~ 200 (253)
T PRK08217 170 VAAMTVTWAKELARYGIRVAAIAPGVIETEM 200 (253)
T ss_pred HHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence 99988776 258999999999987653
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.9e-07 Score=95.11 Aligned_cols=167 Identities=17% Similarity=0.198 Sum_probs=108.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccce-eeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLK-VAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~-i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
+.+|+++|||.++..|..+ .+.|... +.+ |+++.|.... ..+...++..
T Consensus 4 ~~~k~vlItGa~g~iG~~l----a~~l~~~---------------G~~~V~~~~r~~~~--~~~~~~~l~~--------- 53 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAI----ARAFAER---------------GAAGLVICGRNAEK--GEAQAAELEA--------- 53 (260)
T ss_pred CCCcEEEEeCCCchHHHHH----HHHHHHC---------------CCCeEEEEcCCHHH--HHHHHHHHHh---------
Confidence 4578999999655544443 2333221 345 7777775321 1111212110
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ +++.++++ .+|+|||+|+.... .+.++..+++|+.|+.+++
T Consensus 54 ----~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 123 (260)
T PRK06198 54 ----LGAKAVFVQADLSDV------EDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLM 123 (260)
T ss_pred ----cCCeEEEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence 123677889999987 66666554 47999999986431 1334567899999999998
Q ss_pred HHHHHc----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMAKEM----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a~~~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+.+... ....++|++||...++... ..+.|+.+|...|
T Consensus 124 ~~~~~~~~~~~~~g~iv~~ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~ 165 (260)
T PRK06198 124 QEAIKLMRRRKAEGTIVNIGSMSAHGGQP--------------------------------------FLAAYCASKGALA 165 (260)
T ss_pred HHHHHHHHhcCCCCEEEEECCcccccCCC--------------------------------------CcchhHHHHHHHH
Confidence 887432 1135799999987654311 0168999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+.+.. ..++.++.++|+.+.++.
T Consensus 166 ~~~~~~a~e~~~~~i~v~~i~pg~~~t~~ 194 (260)
T PRK06198 166 TLTRNAAYALLRNRIRVNGLNIGWMATEG 194 (260)
T ss_pred HHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence 988765 347889999999887753
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.5e-07 Score=98.20 Aligned_cols=164 Identities=17% Similarity=0.216 Sum_probs=109.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ....+.+++.
T Consensus 3 ~~~k~vlItGas~gIG~~i----a~~l~~---------------~G~~vi~~~r~~~-~~~~~~~~~~------------ 50 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGI----AVGLAE---------------AGADIVGAGRSEP-SETQQQVEAL------------ 50 (248)
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEcCchH-HHHHHHHHhc------------
Confidence 3578999999654444333 333332 2567777777532 1122222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ +++..+++ .+|++||+|+.... .+.+++.+++|+.|+..+++
T Consensus 51 ----~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 120 (248)
T TIGR01832 51 ----GRRFLSLTADLSDI------EAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQ 120 (248)
T ss_pred ----CCceEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHH
Confidence 13688999999997 66655443 47999999987532 13455678999999999999
Q ss_pred HHHHc---cC-CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKEM---KQ-LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~~---~~-~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+... ++ ..++|++||..++.... ....|+.||+..+.
T Consensus 121 ~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~ 162 (248)
T TIGR01832 121 AAAKHFLKQGRGGKIINIASMLSFQGGI--------------------------------------RVPSYTASKHGVAG 162 (248)
T ss_pred HHHHHHHhcCCCeEEEEEecHHhccCCC--------------------------------------CCchhHHHHHHHHH
Confidence 87532 12 46899999986653211 11579999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+++.. ..|+.+.+++||.+..+
T Consensus 163 ~~~~la~e~~~~gi~v~~v~pg~v~t~ 189 (248)
T TIGR01832 163 LTKLLANEWAAKGINVNAIAPGYMATN 189 (248)
T ss_pred HHHHHHHHhCccCcEEEEEEECcCcCc
Confidence 88776 24899999999988754
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.2e-07 Score=97.24 Aligned_cols=113 Identities=14% Similarity=0.141 Sum_probs=82.2
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC--------chhhHHHHHHhhHHHHHHHHHHH---
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR--------FDAHLKVAVSINLRATKALLEMA--- 319 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~--------f~~~~~~~~~~Nv~gt~~Lle~a--- 319 (782)
++.++.+|++++ +++..+++ ++|+|||+|+... ..+.+++.+++|+.|+..+++.+
T Consensus 47 ~~~~~~~Dl~~~------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 120 (248)
T PRK10538 47 NLYIAQLDVRNR------AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPG 120 (248)
T ss_pred ceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 678899999987 66655544 6899999998631 11345578899999977666664
Q ss_pred -HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 320 -KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 320 -~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
++. +..++|++||....... ...+.|+.+|...|.+....
T Consensus 121 ~~~~-~~~~iv~isS~~~~~~~--------------------------------------~~~~~Y~~sK~~~~~~~~~l 161 (248)
T PRK10538 121 MVER-NHGHIINIGSTAGSWPY--------------------------------------AGGNVYGATKAFVRQFSLNL 161 (248)
T ss_pred HHhc-CCcEEEEECCcccCCCC--------------------------------------CCCchhHHHHHHHHHHHHHH
Confidence 333 56789999997543110 00168999999999988765
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..++.+.+++||.+.|+
T Consensus 162 ~~~~~~~~i~v~~v~pg~i~~~ 183 (248)
T PRK10538 162 RTDLHGTAVRVTDIEPGLVGGT 183 (248)
T ss_pred HHHhcCCCcEEEEEeCCeeccc
Confidence 25899999999999764
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.8e-07 Score=95.85 Aligned_cols=112 Identities=12% Similarity=0.180 Sum_probs=80.3
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++.++.+|+++. ++++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 53 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 126 (245)
T PRK12936 53 RVKIFPANLSDR------DEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPM 126 (245)
T ss_pred ceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 677889999987 66665543 57999999987432 2345678899999999998876431
Q ss_pred --cCCceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 --KQLKSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 --~~~~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+..+||++||.... +.+. ...|+.+|...+.+++..
T Consensus 127 ~~~~~~~iv~~sS~~~~~~~~~---------------------------------------~~~Y~~sk~a~~~~~~~la 167 (245)
T PRK12936 127 MRRRYGRIINITSVVGVTGNPG---------------------------------------QANYCASKAGMIGFSKSLA 167 (245)
T ss_pred HHhCCCEEEEECCHHhCcCCCC---------------------------------------CcchHHHHHHHHHHHHHHH
Confidence 256789999997433 2210 156999999777766554
Q ss_pred ----CCCCcEEEecCCeEEe
Q psy16243 399 ----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G 414 (782)
..++++++++|+.+..
T Consensus 168 ~~~~~~~i~v~~i~pg~~~t 187 (245)
T PRK12936 168 QEIATRNVTVNCVAPGFIES 187 (245)
T ss_pred HHhhHhCeEEEEEEECcCcC
Confidence 3479999999987654
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.4e-07 Score=97.30 Aligned_cols=165 Identities=18% Similarity=0.176 Sum_probs=106.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ .+.|... +.++++..|.... ..+...++..
T Consensus 9 l~~k~vlVtG~s~gIG~~l----a~~l~~~---------------G~~vv~~~r~~~~--~~~~~~~l~~---------- 57 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEI----AITFATA---------------GASVVVSDINADA--ANHVVDEIQQ---------- 57 (255)
T ss_pred cCCCEEEEECCCchHHHHH----HHHHHHC---------------CCeEEEEeCCHHH--HHHHHHHHHh----------
Confidence 4579999999655555444 2333321 4567777665321 1111111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc---h---hhHHHHHHhhHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF---D---AHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f---~---~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ ++..++++ .+|++||+|+.... + +.++..+++|+.|+.+++++
T Consensus 58 ---~~~~~~~~~~D~~~~------~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 128 (255)
T PRK06113 58 ---LGGQAFACRCDITSE------QELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQL 128 (255)
T ss_pred ---cCCcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHH
Confidence 013677889999987 66655443 46999999996432 2 34556789999999999999
Q ss_pred HHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+... .+..++|++||.+..... .....|+.||+..+.++
T Consensus 129 ~~~~~~~~~~~~iv~isS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~ 170 (255)
T PRK06113 129 VAPEMEKNGGGVILTITSMAAENKN--------------------------------------INMTSYASSKAAASHLV 170 (255)
T ss_pred HHHHHHhcCCcEEEEEecccccCCC--------------------------------------CCcchhHHHHHHHHHHH
Confidence 7531 133589999997643110 01157999999999999
Q ss_pred HHcC-----CCCcEEEecCCeEEe
Q psy16243 396 RRGG-----AGMPVAMVRPSIVIA 414 (782)
Q Consensus 396 ~~~~-----~glp~~IvRp~~v~G 414 (782)
+... .++.+.++.||.+..
T Consensus 171 ~~la~~~~~~~i~v~~v~pg~~~t 194 (255)
T PRK06113 171 RNMAFDLGEKNIRVNGIAPGAILT 194 (255)
T ss_pred HHHHHHhhhhCeEEEEEecccccc
Confidence 7762 467888888887754
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.4e-07 Score=96.31 Aligned_cols=115 Identities=18% Similarity=0.202 Sum_probs=81.2
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+..+++.+...
T Consensus 62 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 135 (257)
T PRK12744 62 KAVAFQADLTTA------AAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHL 135 (257)
T ss_pred cEEEEecCcCCH------HHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhh
Confidence 678899999987 66666554 47999999996321 1235567899999999999987642
Q ss_pred cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC---
Q psy16243 323 KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--- 399 (782)
Q Consensus 323 ~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--- 399 (782)
....++++++|..+.... +....|+.||+..|.+++.+.
T Consensus 136 ~~~~~iv~~~ss~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~ 177 (257)
T PRK12744 136 NDNGKIVTLVTSLLGAFT--------------------------------------PFYSAYAGSKAPVEHFTRAASKEF 177 (257)
T ss_pred ccCCCEEEEecchhcccC--------------------------------------CCcccchhhHHHHHHHHHHHHHHh
Confidence 223466766433221110 011679999999999988772
Q ss_pred --CCCcEEEecCCeEEecc
Q psy16243 400 --AGMPVAMVRPSIVIATN 416 (782)
Q Consensus 400 --~glp~~IvRp~~v~G~~ 416 (782)
.++++.+++||.+.++.
T Consensus 178 ~~~~i~v~~v~pg~v~t~~ 196 (257)
T PRK12744 178 GARGISVTAVGPGPMDTPF 196 (257)
T ss_pred CcCceEEEEEecCccccch
Confidence 37999999999987653
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.7e-07 Score=98.72 Aligned_cols=113 Identities=17% Similarity=0.111 Sum_probs=83.2
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc--------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD--------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~--------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
.++.++.+|+++. +++.++++ .+|+|||+|+.... .+.++..+++|+.|+.++++++..
T Consensus 48 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 121 (260)
T PRK08267 48 GNAWTGALDVTDR------AAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALP 121 (260)
T ss_pred CceEEEEecCCCH------HHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3688999999987 56655544 46999999997532 134567899999999999888743
Q ss_pred c---cCCceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 322 M---KQLKSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 322 ~---~~~~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
. .+..++|++||.... +... ...|+.||...+.+...
T Consensus 122 ~~~~~~~~~iv~isS~~~~~~~~~---------------------------------------~~~Y~~sKaa~~~~~~~ 162 (260)
T PRK08267 122 YLKATPGARVINTSSASAIYGQPG---------------------------------------LAVYSATKFAVRGLTEA 162 (260)
T ss_pred HHHhCCCCEEEEeCchhhCcCCCC---------------------------------------chhhHHHHHHHHHHHHH
Confidence 1 245789999997543 2210 16799999999888876
Q ss_pred c-----CCCCcEEEecCCeEEe
Q psy16243 398 G-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G 414 (782)
. ..++++.+++||.+..
T Consensus 163 l~~~~~~~~i~v~~i~pg~~~t 184 (260)
T PRK08267 163 LDLEWRRHGIRVADVMPLFVDT 184 (260)
T ss_pred HHHHhcccCcEEEEEecCCcCC
Confidence 5 3489999999988764
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.6e-07 Score=97.46 Aligned_cols=167 Identities=17% Similarity=0.216 Sum_probs=108.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ..+..+++.+
T Consensus 4 ~~~~~~lItG~s~giG~~l----a~~l~~---------------~G~~Vv~~~r~~~---~~~~~~~~~~---------- 51 (263)
T PRK08226 4 LTGKTALITGALQGIGEGI----ARVFAR---------------HGANLILLDISPE---IEKLADELCG---------- 51 (263)
T ss_pred CCCCEEEEeCCCChHHHHH----HHHHHH---------------CCCEEEEecCCHH---HHHHHHHHHH----------
Confidence 3468999999554444333 233322 2567887777642 2222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++.+++ .+|+|||+|+..... +..++.+++|+.|+..+++
T Consensus 52 ---~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 122 (263)
T PRK08226 52 ---RGHRCTAVVADVRDP------ASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTK 122 (263)
T ss_pred ---hCCceEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence 013677899999987 66666655 469999999964321 2344678899999999998
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+..++|++||........ + ....|+.+|...|.+
T Consensus 123 ~~~~~~~~~~~~~iv~isS~~~~~~~~--------------------------------~-----~~~~Y~~sK~a~~~~ 165 (263)
T PRK08226 123 AVLPEMIARKDGRIVMMSSVTGDMVAD--------------------------------P-----GETAYALTKAAIVGL 165 (263)
T ss_pred HHHHHHHhcCCcEEEEECcHHhcccCC--------------------------------C-----CcchHHHHHHHHHHH
Confidence 86531 2456899999975321100 0 015799999999988
Q ss_pred HHHc-----CCCCcEEEecCCeEEecc
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+..+ ..++.+..++||.+.++.
T Consensus 166 ~~~la~~~~~~~i~v~~i~pg~v~t~~ 192 (263)
T PRK08226 166 TKSLAVEYAQSGIRVNAICPGYVRTPM 192 (263)
T ss_pred HHHHHHHhcccCcEEEEEecCcccCHH
Confidence 8765 248999999999988753
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.2e-07 Score=97.90 Aligned_cols=155 Identities=12% Similarity=0.126 Sum_probs=105.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|....
T Consensus 4 l~gk~vlItGas~gIG~~i----a~~l~~---------------~G~~Vi~~~r~~~~---------------------- 42 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAV----VNRLKE---------------EGSNVINFDIKEPS---------------------- 42 (258)
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHH---------------CCCeEEEEeCCccc----------------------
Confidence 4578999999654444333 233322 25677777775321
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+..+++
T Consensus 43 ----~~~~~~~~~D~~~~------~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 112 (258)
T PRK06398 43 ----YNDVDYFKVDVSNK------EQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSK 112 (258)
T ss_pred ----cCceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence 01577889999987 66665554 57999999986432 13455678999999999988
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+..++|++||....... + ....|+.||...|.+
T Consensus 113 ~~~~~~~~~~~g~iv~isS~~~~~~~---------------------------------~-----~~~~Y~~sKaal~~~ 154 (258)
T PRK06398 113 YTIPYMLKQDKGVIINIASVQSFAVT---------------------------------R-----NAAAYVTSKHAVLGL 154 (258)
T ss_pred HHHHHHHHcCCeEEEEeCcchhccCC---------------------------------C-----CCchhhhhHHHHHHH
Confidence 76432 245789999997654321 0 116899999999998
Q ss_pred HHHc----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..++.+..++||.+-.+
T Consensus 155 ~~~la~e~~~~i~vn~i~PG~v~T~ 179 (258)
T PRK06398 155 TRSIAVDYAPTIRCVAVCPGSIRTP 179 (258)
T ss_pred HHHHHHHhCCCCEEEEEecCCccch
Confidence 8766 23488888888877654
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.68 E-value=8.2e-07 Score=92.14 Aligned_cols=114 Identities=17% Similarity=0.181 Sum_probs=80.2
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH---
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA--- 319 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a--- 319 (782)
.++.++.+|++++ ++++.+++ .+|+|||+|+.... .+..++.+++|+.|+..+++.+
T Consensus 50 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 123 (242)
T TIGR01829 50 FDFRVVEGDVSSF------ESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDG 123 (242)
T ss_pred CceEEEEecCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3688999999987 55555443 47999999986431 1334567889999988865553
Q ss_pred -HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 320 -KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 320 -~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
++. +..++|++||.+..... + ....|+.+|...+.+++..
T Consensus 124 ~~~~-~~~~iv~iss~~~~~~~---------------------------------~-----~~~~y~~sk~a~~~~~~~l 164 (242)
T TIGR01829 124 MRER-GWGRIINISSVNGQKGQ---------------------------------F-----GQTNYSAAKAGMIGFTKAL 164 (242)
T ss_pred HHhc-CCcEEEEEcchhhcCCC---------------------------------C-----CcchhHHHHHHHHHHHHHH
Confidence 443 56789999997533110 0 0157999999888776654
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..++++..++|+.+.++
T Consensus 165 a~~~~~~~i~v~~i~pg~~~t~ 186 (242)
T TIGR01829 165 AQEGATKGVTVNTISPGYIATD 186 (242)
T ss_pred HHHhhhhCeEEEEEeeCCCcCc
Confidence 34899999999988764
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.4e-07 Score=95.27 Aligned_cols=167 Identities=16% Similarity=0.178 Sum_probs=109.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.+ .+.+|+++.|... ...+...++.+
T Consensus 9 ~~~k~ilItGas~~IG~~l----a~~l~~---------------~G~~v~~~~r~~~--~~~~~~~~~~~---------- 57 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEI----ARALAG---------------AGAHVLVNGRNAA--TLEAAVAALRA---------- 57 (256)
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHH---------------cCCeEEEEeCCHH--HHHHHHHHHHh----------
Confidence 4589999999655544443 223321 2567888888532 22222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ +++..+++ .+|+|||+|+.... .+.+++.+++|+.|+..+.+
T Consensus 58 ---~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 128 (256)
T PRK06124 58 ---AGGAAEALAFDIADE------EAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSR 128 (256)
T ss_pred ---cCCceEEEEccCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 113578899999987 66665554 35899999996432 13455678899999999997
Q ss_pred HHHH-c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKE-M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~-~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+.. + .+..++|++||....... + ....|+.+|...+.+
T Consensus 129 ~~~~~~~~~~~~~iv~~ss~~~~~~~---------------------------------~-----~~~~Y~~sK~a~~~~ 170 (256)
T PRK06124 129 LAAQRMKRQGYGRIIAITSIAGQVAR---------------------------------A-----GDAVYPAAKQGLTGL 170 (256)
T ss_pred HHHHHHHhcCCcEEEEEeechhccCC---------------------------------C-----CccHhHHHHHHHHHH
Confidence 7643 1 256789999997543211 0 116799999999988
Q ss_pred HHHc-----CCCCcEEEecCCeEEecc
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
++.. ..++.+..++|+.+.++.
T Consensus 171 ~~~la~e~~~~~i~v~~i~pg~v~t~~ 197 (256)
T PRK06124 171 MRALAAEFGPHGITSNAIAPGYFATET 197 (256)
T ss_pred HHHHHHHHHHhCcEEEEEEECCccCcc
Confidence 7765 248999999999888753
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.2e-07 Score=96.68 Aligned_cols=168 Identities=16% Similarity=0.129 Sum_probs=109.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++...
T Consensus 5 l~~k~vlVtGas~gIG~~~----a~~l~~---------------~G~~vv~~~r~~~--~~~~~~~~~~~~--------- 54 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAI----ARAFAR---------------EGAAVALADLDAA--LAERAAAAIARD--------- 54 (260)
T ss_pred cCCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHhc---------
Confidence 4578999999654444333 233332 2567777777532 122222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
....++.++.+|++++ +++..+++ .+|++||+|+...+ .+.++..+++|+.|+..+++
T Consensus 55 --~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 126 (260)
T PRK07063 55 --VAGARVLAVPADVTDA------ASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCR 126 (260)
T ss_pred --cCCceEEEEEccCCCH------HHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHH
Confidence 0123688899999987 66666655 57999999996432 23455678999999999888
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+..++|++||....... + ....|+.||+..+.+
T Consensus 127 ~~~~~~~~~~~g~iv~isS~~~~~~~---------------------------------~-----~~~~Y~~sKaa~~~~ 168 (260)
T PRK07063 127 AVLPGMVERGRGSIVNIASTHAFKII---------------------------------P-----GCFPYPVAKHGLLGL 168 (260)
T ss_pred HHHHHHHhhCCeEEEEECChhhccCC---------------------------------C-----CchHHHHHHHHHHHH
Confidence 86431 234689999997543211 0 015799999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..++||.+-.+
T Consensus 169 ~~~la~el~~~gIrvn~v~PG~v~t~ 194 (260)
T PRK07063 169 TRALGIEYAARNVRVNAIAPGYIETQ 194 (260)
T ss_pred HHHHHHHhCccCeEEEEEeeCCccCh
Confidence 8775 34899999999987643
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.5e-07 Score=96.61 Aligned_cols=165 Identities=18% Similarity=0.206 Sum_probs=106.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+++++|||..+..|..+ .+.|.. .+.+|+++.|... ...+...++..
T Consensus 8 ~~~~~vlItGasggIG~~~----a~~l~~---------------~G~~Vi~~~r~~~--~~~~~~~~l~~---------- 56 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAI----ALAFAE---------------AGADVLIAARTES--QLDEVAEQIRA---------- 56 (263)
T ss_pred CCCCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHh----------
Confidence 3478999999544333332 222321 2568888888632 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ +++.++++ .+|+|||+|+.... .+.....+++|+.|+.++++
T Consensus 57 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 127 (263)
T PRK07814 57 ---AGRRAHVVAADLAHP------EATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTV 127 (263)
T ss_pred ---cCCcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHH
Confidence 123678899999987 66665544 57999999986432 13455788999999999999
Q ss_pred HHHHc----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKEM----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
++... .+..++|++||.+..... +..+.|+.||+..|.
T Consensus 128 ~~~~~~~~~~~~g~iv~~sS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~ 169 (263)
T PRK07814 128 AAVPLMLEHSGGGSVINISSTMGRLAG--------------------------------------RGFAAYGTAKAALAH 169 (263)
T ss_pred HHHHHHHhhcCCeEEEEEccccccCCC--------------------------------------CCCchhHHHHHHHHH
Confidence 98641 245789999997432110 011679999999999
Q ss_pred HHHHc----CCCCcEEEecCCeEEe
Q psy16243 394 MVRRG----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 394 ll~~~----~~glp~~IvRp~~v~G 414 (782)
+++.. ..++.+..++||.+..
T Consensus 170 ~~~~~~~e~~~~i~v~~i~Pg~v~t 194 (263)
T PRK07814 170 YTRLAALDLCPRIRVNAIAPGSILT 194 (263)
T ss_pred HHHHHHHHHCCCceEEEEEeCCCcC
Confidence 88876 2357777788877653
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=3e-07 Score=95.85 Aligned_cols=164 Identities=15% Similarity=0.151 Sum_probs=107.6
Q ss_pred CeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCcc
Q psy16243 175 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPH 254 (782)
Q Consensus 175 k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~ 254 (782)
|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++.. .
T Consensus 2 ~~vlItGas~giG~~~----a~~l~~---------------~G~~Vi~~~r~~~~--~~~~~~~~~~------------~ 48 (243)
T PRK07102 2 KKILIIGATSDIARAC----ARRYAA---------------AGARLYLAARDVER--LERLADDLRA------------R 48 (243)
T ss_pred cEEEEEcCCcHHHHHH----HHHHHh---------------cCCEEEEEeCCHHH--HHHHHHHHHH------------h
Confidence 5799999655444433 233322 15678888886432 1122222210 0
Q ss_pred cccceeEEecCCCCCCCCCCHHhHHHHhc----CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 255 YLSKMVAVTGDCLKPGVGINSEDRQTLVD----NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 255 ~~~kv~~i~gDi~~~~lGl~~~~~~~l~~----~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
...++.++.+|++++ ++++++++ .+|+++|+|+..... +.....+++|+.|+.++++.+...
T Consensus 49 ~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 122 (243)
T PRK07102 49 GAVAVSTHELDILDT------ASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRF 122 (243)
T ss_pred cCCeEEEEecCCCCh------HHHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 123788999999987 66666555 359999999864321 223357889999999999886542
Q ss_pred --cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 323 --KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 323 --~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
.+..++|++||.+..... + ....|+.+|+..+.+.+..
T Consensus 123 ~~~~~~~iv~~sS~~~~~~~---------------------------------~-----~~~~Y~~sK~a~~~~~~~l~~ 164 (243)
T PRK07102 123 EARGSGTIVGISSVAGDRGR---------------------------------A-----SNYVYGSAKAALTAFLSGLRN 164 (243)
T ss_pred HhCCCCEEEEEecccccCCC---------------------------------C-----CCcccHHHHHHHHHHHHHHHH
Confidence 246789999997532110 0 0156999999998888765
Q ss_pred ---CCCCcEEEecCCeEEec
Q psy16243 399 ---GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ---~~glp~~IvRp~~v~G~ 415 (782)
..|+++.+++|+.+.++
T Consensus 165 el~~~gi~v~~v~pg~v~t~ 184 (243)
T PRK07102 165 RLFKSGVHVLTVKPGFVRTP 184 (243)
T ss_pred HhhccCcEEEEEecCcccCh
Confidence 35899999999988864
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=3e-07 Score=96.51 Aligned_cols=165 Identities=19% Similarity=0.176 Sum_probs=106.7
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+...++..
T Consensus 5 ~~k~~lItGas~giG~~i----a~~l~~---------------~G~~v~~~~r~~~--~~~~~~~~~~~----------- 52 (254)
T PRK07478 5 NGKVAIITGASSGIGRAA----AKLFAR---------------EGAKVVVGARRQA--ELDQLVAEIRA----------- 52 (254)
T ss_pred CCCEEEEeCCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHh-----------
Confidence 468999999654444333 233322 2567888888643 12222222211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch--------hhHHHHHHhhHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD--------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~--------~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++.+.+++ .+|++||+|+..... +.++..+++|+.|+..+.+
T Consensus 53 --~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~ 124 (254)
T PRK07478 53 --EGGEAVALAGDVRDE------AYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAK 124 (254)
T ss_pred --cCCcEEEEEcCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 013678899999987 66666554 579999999864211 3355678999988887766
Q ss_pred HH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+ ++. +..++|++||...+.... +. ...|+.||+..+.
T Consensus 125 ~~~~~l~~~-~~~~iv~~sS~~~~~~~~--------------------------------~~-----~~~Y~~sK~a~~~ 166 (254)
T PRK07478 125 HQIPAMLAR-GGGSLIFTSTFVGHTAGF--------------------------------PG-----MAAYAASKAGLIG 166 (254)
T ss_pred HHHHHHHhc-CCceEEEEechHhhccCC--------------------------------CC-----cchhHHHHHHHHH
Confidence 54 332 456899999976542110 00 1679999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+++.. ..|+.+..++||.+-.+
T Consensus 167 ~~~~la~e~~~~gi~v~~v~PG~v~t~ 193 (254)
T PRK07478 167 LTQVLAAEYGAQGIRVNALLPGGTDTP 193 (254)
T ss_pred HHHHHHHHHhhcCEEEEEEeeCcccCc
Confidence 88775 24789999999887643
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.7e-07 Score=99.26 Aligned_cols=165 Identities=18% Similarity=0.204 Sum_probs=105.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++..
T Consensus 6 l~~k~vlITGas~gIG~~l----a~~la~---------------~G~~Vvl~~R~~~--~l~~~~~~l~~---------- 54 (334)
T PRK07109 6 IGRQVVVITGASAGVGRAT----ARAFAR---------------RGAKVVLLARGEE--GLEALAAEIRA---------- 54 (334)
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEECCHH--HHHHHHHHHHH----------
Confidence 4578999999654444333 233322 1567888888532 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
.-.++.++.+|++++ ++++.+++ .+|++||+|+...+. +..+..+++|+.|+.++.+
T Consensus 55 ---~g~~~~~v~~Dv~d~------~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~ 125 (334)
T PRK07109 55 ---AGGEALAVVADVADA------EAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTL 125 (334)
T ss_pred ---cCCcEEEEEecCCCH------HHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 113678899999997 66666554 579999999864322 3345677888777666554
Q ss_pred H----HHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 M----AKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~----a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
. +++. +..++|++||...+...+ ....|+.||+..+.
T Consensus 126 ~~l~~~~~~-~~g~iV~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~ 166 (334)
T PRK07109 126 AALRHMRPR-DRGAIIQVGSALAYRSIP--------------------------------------LQSAYCAAKHAIRG 166 (334)
T ss_pred HHHHHHHhc-CCcEEEEeCChhhccCCC--------------------------------------cchHHHHHHHHHHH
Confidence 4 4443 457899999987654211 11679999999888
Q ss_pred HHHHc-------CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-------GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-------~~glp~~IvRp~~v~G~ 415 (782)
+.... ..++.+++++|+.+..|
T Consensus 167 ~~~~l~~el~~~~~~I~v~~v~Pg~v~T~ 195 (334)
T PRK07109 167 FTDSLRCELLHDGSPVSVTMVQPPAVNTP 195 (334)
T ss_pred HHHHHHHHHhhcCCCeEEEEEeCCCccCc
Confidence 76654 13688999999987653
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.8e-07 Score=95.10 Aligned_cols=114 Identities=15% Similarity=0.200 Sum_probs=80.7
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH--
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE-- 321 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~-- 321 (782)
++..+.+|+++. +++..+++ .+|+|||+|+.... .+.++..+++|+.|+..+.+.+..
T Consensus 54 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 127 (246)
T PRK12938 54 DFIASEGNVGDW------DSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGM 127 (246)
T ss_pred cEEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 577889999987 66655544 57999999987431 134557789999997776665432
Q ss_pred -ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 322 -MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 322 -~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
..+..++|++||.+..... .....|+.+|...+.+....
T Consensus 128 ~~~~~~~iv~isS~~~~~~~--------------------------------------~~~~~y~~sK~a~~~~~~~l~~ 169 (246)
T PRK12938 128 VERGWGRIINISSVNGQKGQ--------------------------------------FGQTNYSTAKAGIHGFTMSLAQ 169 (246)
T ss_pred HHcCCeEEEEEechhccCCC--------------------------------------CCChhHHHHHHHHHHHHHHHHH
Confidence 1256789999997543210 01167999999888776654
Q ss_pred ---CCCCcEEEecCCeEEec
Q psy16243 399 ---GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ---~~glp~~IvRp~~v~G~ 415 (782)
..++++.+++||.+.++
T Consensus 170 ~~~~~gi~v~~i~pg~~~t~ 189 (246)
T PRK12938 170 EVATKGVTVNTVSPGYIGTD 189 (246)
T ss_pred HhhhhCeEEEEEEecccCCc
Confidence 35899999999988754
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.9e-07 Score=96.69 Aligned_cols=113 Identities=17% Similarity=0.154 Sum_probs=80.0
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH----H
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM----A 319 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~----a 319 (782)
++.++.+|++++ ++++++++ .+|+|||+|+.... .+.++..+++|+.|+..+... +
T Consensus 52 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~ 125 (255)
T PRK06463 52 GVFTIKCDVGNR------DQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLL 125 (255)
T ss_pred CCeEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 467889999987 66666554 57999999987431 133556789999996555444 4
Q ss_pred HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 320 KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 320 ~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
++. +..++|++||...++... + ....|+.||+..+.+++..
T Consensus 126 ~~~-~~g~iv~isS~~~~~~~~--------------------------------~-----~~~~Y~asKaa~~~~~~~la 167 (255)
T PRK06463 126 KLS-KNGAIVNIASNAGIGTAA--------------------------------E-----GTTFYAITKAGIIILTRRLA 167 (255)
T ss_pred Hhc-CCcEEEEEcCHHhCCCCC--------------------------------C-----CccHhHHHHHHHHHHHHHHH
Confidence 433 457899999987653210 0 0156999999999988776
Q ss_pred ----CCCCcEEEecCCeEEe
Q psy16243 399 ----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G 414 (782)
..|+++.+++||.+-.
T Consensus 168 ~e~~~~~i~v~~i~Pg~v~t 187 (255)
T PRK06463 168 FELGKYGIRVNAVAPGWVET 187 (255)
T ss_pred HHhhhcCeEEEEEeeCCCCC
Confidence 2479999999987754
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.4e-06 Score=91.32 Aligned_cols=165 Identities=19% Similarity=0.197 Sum_probs=105.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++.+
T Consensus 6 l~~k~vlItGas~gIG~~l----~~~l~~---------------~G~~Vi~~~r~~~--~~~~~~~~~~~---------- 54 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAI----AKLLAQ---------------QGAHVIVSSRKLD--GCQAVADAIVA---------- 54 (252)
T ss_pred cCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHh----------
Confidence 3478999999544444333 233321 1567888887532 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----h---hhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----D---AHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----~---~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++..|+++. ++.+.+++ .+|++||+|+.... + +.++..+++|+.|+..++
T Consensus 55 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 125 (252)
T PRK07035 55 ---AGGKAEALACHIGEM------EQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMS 125 (252)
T ss_pred ---cCCeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence 112567889999987 56555444 47999999985321 1 334567889999998888
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+... .+..+++++||.+..... + ....|+.||++.|.
T Consensus 126 ~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------------------~-----~~~~Y~~sK~al~~ 167 (252)
T PRK07035 126 VEAGKLMKEQGGGSIVNVASVNGVSPG---------------------------------D-----FQGIYSITKAAVIS 167 (252)
T ss_pred HHHHHHHHhCCCcEEEEECchhhcCCC---------------------------------C-----CCcchHHHHHHHHH
Confidence 775321 245789999987543210 0 11679999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEe
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+++.+ ..|+++..+.||.+..
T Consensus 168 ~~~~l~~e~~~~gi~v~~i~PG~v~t 193 (252)
T PRK07035 168 MTKAFAKECAPFGIRVNALLPGLTDT 193 (252)
T ss_pred HHHHHHHHHhhcCEEEEEEeeccccC
Confidence 98876 2489999999988764
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.3e-07 Score=94.75 Aligned_cols=114 Identities=19% Similarity=0.188 Sum_probs=82.7
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ +++..+++ .+|+|||+|+..... +.++..+++|+.|+..+++.+...
T Consensus 67 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 140 (256)
T PRK12748 67 VRCEHMEIDLSQP------YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQ 140 (256)
T ss_pred CeEEEEECCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3688999999987 55544443 479999999864321 234567899999999999887532
Q ss_pred ---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 ---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 ---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
....++|++||...+.... . ...|+.||++.|.+++..
T Consensus 141 ~~~~~~~~iv~~ss~~~~~~~~---------------------------------~-----~~~Y~~sK~a~~~~~~~la 182 (256)
T PRK12748 141 YDGKAGGRIINLTSGQSLGPMP---------------------------------D-----ELAYAATKGAIEAFTKSLA 182 (256)
T ss_pred hhhcCCeEEEEECCccccCCCC---------------------------------C-----chHHHHHHHHHHHHHHHHH
Confidence 1346899999986543210 0 157999999999988765
Q ss_pred ----CCCCcEEEecCCeEEe
Q psy16243 399 ----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G 414 (782)
..+++++.++||.+..
T Consensus 183 ~e~~~~~i~v~~i~Pg~~~t 202 (256)
T PRK12748 183 PELAEKGITVNAVNPGPTDT 202 (256)
T ss_pred HHHHHhCeEEEEEEeCcccC
Confidence 2489999999987653
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.4e-07 Score=96.10 Aligned_cols=166 Identities=13% Similarity=0.123 Sum_probs=108.8
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|... +.+|++..|... ...+...++..
T Consensus 8 ~~k~~lItGas~giG~~i----a~~L~~~---------------G~~vvl~~r~~~--~~~~~~~~l~~----------- 55 (254)
T PRK08085 8 AGKNILITGSAQGIGFLL----ATGLAEY---------------GAEIIINDITAE--RAELAVAKLRQ----------- 55 (254)
T ss_pred CCCEEEEECCCChHHHHH----HHHHHHc---------------CCEEEEEcCCHH--HHHHHHHHHHh-----------
Confidence 478999999654444333 2333221 456777776532 12222222211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++..+.+|++++ ++++.+++ .+|+|||+|+.... .+.++..+++|+.|+..+++.
T Consensus 56 --~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 127 (254)
T PRK08085 56 --EGIKAHAAPFNVTHK------QEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQA 127 (254)
T ss_pred --cCCeEEEEecCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 113577889999998 66665554 47999999986432 244557889999999988887
Q ss_pred HHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+... .+..++|++||....... +....|+.||...|.++
T Consensus 128 ~~~~~~~~~~~~iv~isS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~ 169 (254)
T PRK08085 128 VARYMVKRQAGKIINICSMQSELGR--------------------------------------DTITPYAASKGAVKMLT 169 (254)
T ss_pred HHHHHHHcCCcEEEEEccchhccCC--------------------------------------CCCcchHHHHHHHHHHH
Confidence 6542 245789999997532110 01157999999999998
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.. ..|+.+..++||.+..+.
T Consensus 170 ~~la~e~~~~gi~v~~v~pG~~~t~~ 195 (254)
T PRK08085 170 RGMCVELARHNIQVNGIAPGYFKTEM 195 (254)
T ss_pred HHHHHHHHhhCeEEEEEEeCCCCCcc
Confidence 876 248999999999887653
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=7.2e-07 Score=93.79 Aligned_cols=165 Identities=17% Similarity=0.163 Sum_probs=103.1
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.++++|||..+..|..+ .+.|... .+.+|++..|.... ...+..+++...
T Consensus 8 ~~~vlItGas~giG~~l----a~~l~~~--------------gg~~V~~~~r~~~~-~~~~~~~~l~~~----------- 57 (253)
T PRK07904 8 PQTILLLGGTSEIGLAI----CERYLKN--------------APARVVLAALPDDP-RRDAAVAQMKAA----------- 57 (253)
T ss_pred CcEEEEEcCCcHHHHHH----HHHHHhc--------------CCCeEEEEeCCcch-hHHHHHHHHHhc-----------
Confidence 57899999766555444 2333211 13678888886432 122222222110
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCchh----h---HHHHHHhhHHHHHH----HH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRFDA----H---LKVAVSINLRATKA----LL 316 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f~~----~---~~~~~~~Nv~gt~~----Ll 316 (782)
...+++++.+|++++ ++++++++ ++|++||+|+...... . ..+.+++|+.|+.. ++
T Consensus 58 -~~~~v~~~~~D~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~ 130 (253)
T PRK07904 58 -GASSVEVIDFDALDT------DSHPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLG 130 (253)
T ss_pred -CCCceEEEEecCCCh------HHHHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHH
Confidence 113688999999987 54433332 6899999998743211 1 12468899998876 45
Q ss_pred HHHHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 317 EMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 317 e~a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
+++++. +..++|++||....... + ....|+.||+..+.+.+
T Consensus 131 ~~~~~~-~~~~iv~isS~~g~~~~---------------------------------~-----~~~~Y~~sKaa~~~~~~ 171 (253)
T PRK07904 131 EKMRAQ-GFGQIIAMSSVAGERVR---------------------------------R-----SNFVYGSTKAGLDGFYL 171 (253)
T ss_pred HHHHhc-CCceEEEEechhhcCCC---------------------------------C-----CCcchHHHHHHHHHHHH
Confidence 555554 56899999998532110 0 01469999998886655
Q ss_pred Hc-----CCCCcEEEecCCeEEe
Q psy16243 397 RG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G 414 (782)
.. ..++++.+++||.+..
T Consensus 172 ~l~~el~~~~i~v~~v~Pg~v~t 194 (253)
T PRK07904 172 GLGEALREYGVRVLVVRPGQVRT 194 (253)
T ss_pred HHHHHHhhcCCEEEEEeeCceec
Confidence 43 3589999999999875
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.5e-07 Score=96.09 Aligned_cols=169 Identities=16% Similarity=0.165 Sum_probs=108.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|... +.+|+++.|.... ...+..+++..
T Consensus 6 ~~~k~~lVtG~s~gIG~~i----a~~l~~~---------------G~~v~~~~r~~~~-~~~~~~~~l~~---------- 55 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRI----AIGLAQA---------------GADVALFDLRTDD-GLAETAEHIEA---------- 55 (254)
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHHC---------------CCEEEEEeCCcch-HHHHHHHHHHh----------
Confidence 4579999999654444333 2333321 5678888775321 11222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
...++..+.+|++++ +++.++++ .+|++||+|+..... +.+++.+++|+.|+..+++
T Consensus 56 ---~~~~~~~~~~D~~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 126 (254)
T PRK06114 56 ---AGRRAIQIAADVTSK------ADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQ 126 (254)
T ss_pred ---cCCceEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHH
Confidence 113677889999987 66665554 369999999975421 3456788999999988777
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+..++|++||........ . .....|+.+|+..+.+
T Consensus 127 ~~~~~~~~~~~~~iv~isS~~~~~~~~---------------------------------~---~~~~~Y~~sKaa~~~l 170 (254)
T PRK06114 127 AEARAMLENGGGSIVNIASMSGIIVNR---------------------------------G---LLQAHYNASKAGVIHL 170 (254)
T ss_pred HHHHHHHhcCCcEEEEECchhhcCCCC---------------------------------C---CCcchHHHHHHHHHHH
Confidence 64321 2446899999976432110 0 0015799999998888
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
++.. ..|+++.+++||.+.++
T Consensus 171 ~~~la~e~~~~gi~v~~v~PG~i~t~ 196 (254)
T PRK06114 171 SKSLAMEWVGRGIRVNSISPGYTATP 196 (254)
T ss_pred HHHHHHHHhhcCeEEEEEeecCccCc
Confidence 7765 35899999999988764
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.7e-07 Score=95.96 Aligned_cols=169 Identities=18% Similarity=0.219 Sum_probs=111.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|.++.|... ...+...++.. .
T Consensus 7 ~~~k~~lItGa~~gIG~~~----a~~l~~---------------~G~~v~~~~r~~~--~~~~~~~~l~~---------~ 56 (257)
T PRK09242 7 LDGQTALITGASKGIGLAI----AREFLG---------------LGADVLIVARDAD--ALAQARDELAE---------E 56 (257)
T ss_pred cCCCEEEEeCCCchHHHHH----HHHHHH---------------cCCEEEEEeCCHH--HHHHHHHHHHh---------h
Confidence 4589999999655444333 233322 2567888888532 22222222211 0
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
.+ ..++.++.+|++++ ++++.+++ .+|+|||+|+.... .+.++..+.+|+.|+..+++
T Consensus 57 ~~--~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 128 (257)
T PRK09242 57 FP--EREVHGLAADVSDD------EDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSR 128 (257)
T ss_pred CC--CCeEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHH
Confidence 01 13788999999987 55555444 46999999986321 23456788999999999988
Q ss_pred HHHH---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKE---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++.. ..+..++|++||.+...... ....|+.||...+.+
T Consensus 129 ~~~~~~~~~~~~~ii~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~ 170 (257)
T PRK09242 129 YAHPLLKQHASSAIVNIGSVSGLTHVR--------------------------------------SGAPYGMTKAALLQM 170 (257)
T ss_pred HHHHHHHhcCCceEEEECccccCCCCC--------------------------------------CCcchHHHHHHHHHH
Confidence 8642 12457899999986553211 116799999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEecc
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
++.. ..++++..++||.+.++.
T Consensus 171 ~~~la~e~~~~~i~v~~i~Pg~i~t~~ 197 (257)
T PRK09242 171 TRNLAVEWAEDGIRVNAVAPWYIRTPL 197 (257)
T ss_pred HHHHHHHHHHhCeEEEEEEECCCCCcc
Confidence 8765 348999999999887653
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=4.6e-07 Score=98.40 Aligned_cols=182 Identities=15% Similarity=0.106 Sum_probs=110.8
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
+...+|+++|||..+.+|..+ .+.|.. .+.+|++..|... ...+.++++...
T Consensus 10 ~~l~gk~~lITGas~GIG~~~----a~~La~---------------~G~~Vil~~R~~~--~~~~~~~~l~~~------- 61 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGL----ARRLAA---------------AGAEVILPVRNRA--KGEAAVAAIRTA------- 61 (313)
T ss_pred cccCCCEEEEeCCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHHh-------
Confidence 556789999999755444333 334432 1567888888632 222333332210
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch------hhHHHHHHhhHHHHHHHH
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD------AHLKVAVSINLRATKALL 316 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~------~~~~~~~~~Nv~gt~~Ll 316 (782)
.+ ..++.++.+|+++. ++.+.+++ .+|++||+||..... +.++..+.+|+.|...+.
T Consensus 62 --~~--~~~v~~~~~Dl~d~------~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~ 131 (313)
T PRK05854 62 --VP--DAKLSLRALDLSSL------ASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALT 131 (313)
T ss_pred --CC--CCceEEEEecCCCH------HHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHH
Confidence 11 13688999999987 66665544 379999999975321 345667899999988777
Q ss_pred HHHHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 317 EMAKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 317 e~a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+.+... .+-.++|++||........ .-..... . .+ ...-..|+.||...+.+
T Consensus 132 ~~llp~l~~~~~riv~vsS~~~~~~~~--~~~~~~~----~-----------------~~---~~~~~~Y~~SK~a~~~~ 185 (313)
T PRK05854 132 AHLLPLLRAGRARVTSQSSIAARRGAI--NWDDLNW----E-----------------RS---YAGMRAYSQSKIAVGLF 185 (313)
T ss_pred HHHHHHHHhCCCCeEEEechhhcCCCc--Ccccccc----c-----------------cc---CcchhhhHHHHHHHHHH
Confidence 765421 1235899999986432211 0000000 0 00 00115799999999988
Q ss_pred HHHc-------CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-------GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-------~~glp~~IvRp~~v~G~ 415 (782)
.... ..|+.+..+.||.|..+
T Consensus 186 ~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 186 ALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred HHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 7655 23688899999988643
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=5.7e-07 Score=94.24 Aligned_cols=114 Identities=15% Similarity=0.201 Sum_probs=80.5
Q ss_pred ceeEEecCCCCCCCCCCHHhHHH----Hh---------cCceEEEEcCcccCc---h----hhHHHHHHhhHHHHHHHHH
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQT----LV---------DNIHVVFHCAATVRF---D----AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~----l~---------~~vdiViH~Aa~v~f---~----~~~~~~~~~Nv~gt~~Lle 317 (782)
++..+..|+++. ++... +. ..+|++||+||.... . +.++..+++|+.|+..+++
T Consensus 55 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~ 128 (252)
T PRK12747 55 SAFSIGANLESL------HGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQ 128 (252)
T ss_pred ceEEEecccCCH------HHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence 466788899876 33322 21 158999999996321 1 2345678899999999998
Q ss_pred HHHH-ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 318 MAKE-MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 318 ~a~~-~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
.+.. +..-.++|++||........ ....|+.||+..+.+++
T Consensus 129 ~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~ 170 (252)
T PRK12747 129 QALSRLRDNSRIINISSAATRISLP--------------------------------------DFIAYSMTKGAINTMTF 170 (252)
T ss_pred HHHHHhhcCCeEEEECCcccccCCC--------------------------------------CchhHHHHHHHHHHHHH
Confidence 7654 22335899999986543210 01579999999999887
Q ss_pred Hc-----CCCCcEEEecCCeEEec
Q psy16243 397 RG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~ 415 (782)
.. ..|+++..+.||.|.++
T Consensus 171 ~la~e~~~~girvn~v~Pg~v~t~ 194 (252)
T PRK12747 171 TLAKQLGARGITVNAILPGFIKTD 194 (252)
T ss_pred HHHHHHhHcCCEEEEEecCCccCc
Confidence 65 34899999999988764
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.3e-07 Score=95.52 Aligned_cols=115 Identities=11% Similarity=0.133 Sum_probs=84.1
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ ++++.+++ .+|+|||+|+..... +.++..+++|+.|+..+++++...
T Consensus 52 ~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (256)
T PRK12743 52 VRAEIRQLDLSDL------PEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARH 125 (256)
T ss_pred CceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3688899999997 66655544 479999999874321 345578899999999999987543
Q ss_pred ----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 323 ----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 323 ----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
++-.++|++||....... +....|+.+|...+.+++..
T Consensus 126 l~~~~~~g~ii~isS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~l~~~l 167 (256)
T PRK12743 126 MVKQGQGGRIINITSVHEHTPL--------------------------------------PGASAYTAAKHALGGLTKAM 167 (256)
T ss_pred HHhcCCCeEEEEEeeccccCCC--------------------------------------CCcchhHHHHHHHHHHHHHH
Confidence 113589999997432110 01157999999999988765
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..++++..++||.+.++
T Consensus 168 a~~~~~~~i~v~~v~Pg~~~t~ 189 (256)
T PRK12743 168 ALELVEHGILVNAVAPGAIATP 189 (256)
T ss_pred HHHhhhhCeEEEEEEeCCccCc
Confidence 34799999999998865
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=3e-07 Score=96.58 Aligned_cols=167 Identities=16% Similarity=0.144 Sum_probs=109.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+...++..
T Consensus 7 ~~~k~ilItGasg~IG~~~----a~~l~~---------------~G~~Vi~~~r~~~~--~~~~~~~l~~---------- 55 (258)
T PRK06949 7 LEGKVALVTGASSGLGARF----AQVLAQ---------------AGAKVVLASRRVER--LKELRAEIEA---------- 55 (258)
T ss_pred CCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh----------
Confidence 4578999999555444433 222221 25578888886321 1111111110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ +++.++++ .+|+|||+|+.... .+.++..+++|+.|+..+++
T Consensus 56 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 126 (258)
T PRK06949 56 ---EGGAAHVVSLDVTDY------QSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQ 126 (258)
T ss_pred ---cCCcEEEEEecCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHH
Confidence 113678899999987 66666655 47999999996422 13455678999999999988
Q ss_pred HHHHc---cC--------CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHH
Q psy16243 318 MAKEM---KQ--------LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYAL 386 (782)
Q Consensus 318 ~a~~~---~~--------~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~ 386 (782)
.+... .. ..++|++||....... +....|+.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------------------------------------~~~~~Y~~ 168 (258)
T PRK06949 127 EVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL--------------------------------------PQIGLYCM 168 (258)
T ss_pred HHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC--------------------------------------CCccHHHH
Confidence 76421 01 2589999997654221 01167999
Q ss_pred HHHHHHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 387 TKQVAEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 387 SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+|...|.++... ..++++++++||.+.++.
T Consensus 169 sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~ 203 (258)
T PRK06949 169 SKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEI 203 (258)
T ss_pred HHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCc
Confidence 999999988775 248999999999998753
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=5.6e-07 Score=95.83 Aligned_cols=167 Identities=16% Similarity=0.166 Sum_probs=108.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|.++.|... ...+..+++.+
T Consensus 8 ~~~k~vlVtGas~giG~~i----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~~~---------- 56 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAM----AKELAR---------------AGAKVAILDRNQE--KAEAVVAEIKA---------- 56 (278)
T ss_pred cCCCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHh----------
Confidence 4578999999654444333 233321 2567888877532 22222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc----------------------hhhHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF----------------------DAHLK 302 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f----------------------~~~~~ 302 (782)
...++.++.+|++++ +++..+++ .+|++||+|+.... .+.++
T Consensus 57 ---~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (278)
T PRK08277 57 ---AGGEALAVKADVLDK------ESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFE 127 (278)
T ss_pred ---cCCeEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHH
Confidence 113678899999987 56655543 57999999985321 13455
Q ss_pred HHHHhhHHHHHHHHHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCC
Q psy16243 303 VAVSINLRATKALLEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDY 379 (782)
Q Consensus 303 ~~~~~Nv~gt~~Lle~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~ 379 (782)
..+++|+.++..+++.+... .+..++|++||...+... +
T Consensus 128 ~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~---------------------------------~----- 169 (278)
T PRK08277 128 FVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPL---------------------------------T----- 169 (278)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCC---------------------------------C-----
Confidence 67889999998776654321 235689999998765321 0
Q ss_pred CCccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 380 WPNTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 380 ~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
....|+.||+..|.+++.. ..++.+..++||.+..+.
T Consensus 170 ~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~ 211 (278)
T PRK08277 170 KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ 211 (278)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence 0157999999999988765 248999999999988753
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.9e-07 Score=97.86 Aligned_cols=114 Identities=13% Similarity=0.145 Sum_probs=82.0
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++.++.+|++++ ++++++++ ++|+|||+|+..... +.++..+++|+.|+.++++.+...
T Consensus 45 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 118 (274)
T PRK05693 45 GFTAVQLDVNDG------AALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLL 118 (274)
T ss_pred CCeEEEeeCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 356788999987 66665553 579999999864321 345678899999999999886431
Q ss_pred -cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---
Q psy16243 323 -KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--- 398 (782)
Q Consensus 323 -~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--- 398 (782)
.+..++|++||.+..... +....|+.||...|.+....
T Consensus 119 ~~~~g~iv~isS~~~~~~~--------------------------------------~~~~~Y~~sK~al~~~~~~l~~e 160 (274)
T PRK05693 119 RRSRGLVVNIGSVSGVLVT--------------------------------------PFAGAYCASKAAVHALSDALRLE 160 (274)
T ss_pred hhcCCEEEEECCccccCCC--------------------------------------CCccHHHHHHHHHHHHHHHHHHH
Confidence 134678999987543210 01167999999988887654
Q ss_pred --CCCCcEEEecCCeEEec
Q psy16243 399 --GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 --~~glp~~IvRp~~v~G~ 415 (782)
..|+.+++++||.|..+
T Consensus 161 ~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 161 LAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred hhhhCeEEEEEecCccccc
Confidence 35899999999998754
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.61 E-value=6.4e-07 Score=107.05 Aligned_cols=166 Identities=15% Similarity=0.133 Sum_probs=105.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|.++.|.... ..+...++.. .
T Consensus 412 l~gkvvLVTGasggIG~ai----A~~La~---------------~Ga~Vvi~~r~~~~--~~~~~~~l~~---------~ 461 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRET----ARRLAA---------------EGAHVVLADLNLEA--AEAVAAEING---------Q 461 (676)
T ss_pred CCCCEEEEeCCCcHHHHHH----HHHHHh---------------CCCEEEEEeCCHHH--HHHHHHHHHh---------h
Confidence 5689999999655544433 233322 15677777775321 1111111110 0
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
. ...++..+.+|++++ +++..+++ ++|+|||+|+..... +.+...+++|+.|+..+..
T Consensus 462 ~--~~~~~~~v~~Dvtd~------~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~ 533 (676)
T TIGR02632 462 F--GAGRAVALKMDVTDE------QAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAR 533 (676)
T ss_pred c--CCCcEEEEECCCCCH------HHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 112567899999987 67766665 579999999964321 2345678899998877664
Q ss_pred HH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+ ++.+.-.++|++||........ ....|+.||...|.
T Consensus 534 ~al~~m~~~~~~g~IV~iSS~~a~~~~~--------------------------------------~~~aY~aSKaA~~~ 575 (676)
T TIGR02632 534 EAFRQMREQGLGGNIVFIASKNAVYAGK--------------------------------------NASAYSAAKAAEAH 575 (676)
T ss_pred HHHHHHHhcCCCCEEEEEeChhhcCCCC--------------------------------------CCHHHHHHHHHHHH
Confidence 43 2321235799999975432110 01689999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEE
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVI 413 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~ 413 (782)
+++.+ ..|+.+..++|+.|.
T Consensus 576 l~r~lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 576 LARCLAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred HHHHHHHHhcccCeEEEEEECCcee
Confidence 98765 248999999999886
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.9e-07 Score=95.52 Aligned_cols=158 Identities=20% Similarity=0.199 Sum_probs=105.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..
T Consensus 4 ~~~k~~lItGas~gIG~~l----a~~l~~---------------~g~~v~~~~r~~~~--------~~------------ 44 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGI----ARAFLA---------------AGATVVVCGRRAPE--------TV------------ 44 (252)
T ss_pred CCCCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEeCChhh--------hh------------
Confidence 3478999999654444333 233322 14577888775321 00
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++++++. +|+|||+|+.... .+..+..+++|+.|+..+++
T Consensus 45 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 115 (252)
T PRK07856 45 ---DGRPAEFHAADVRDP------DQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQ 115 (252)
T ss_pred ---cCCceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence 013577889999987 667666653 5999999986422 13345788999999999999
Q ss_pred HHHHc----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKEM----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+... ++..++|++||....... + ....|+.||...|.
T Consensus 116 ~~~~~~~~~~~~g~ii~isS~~~~~~~---------------------------------~-----~~~~Y~~sK~a~~~ 157 (252)
T PRK07856 116 AANAVMQQQPGGGSIVNIGSVSGRRPS---------------------------------P-----GTAAYGAAKAGLLN 157 (252)
T ss_pred HHHHHHHhcCCCcEEEEEcccccCCCC---------------------------------C-----CCchhHHHHHHHHH
Confidence 87541 133689999998654211 0 11689999999999
Q ss_pred HHHHc----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~----~~glp~~IvRp~~v~G~ 415 (782)
+++.. ...+.+..++||.+..+
T Consensus 158 l~~~la~e~~~~i~v~~i~Pg~v~t~ 183 (252)
T PRK07856 158 LTRSLAVEWAPKVRVNAVVVGLVRTE 183 (252)
T ss_pred HHHHHHHHhcCCeEEEEEEeccccCh
Confidence 98776 23477888888877654
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.4e-06 Score=91.29 Aligned_cols=168 Identities=16% Similarity=0.188 Sum_probs=106.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|... +.+|++..|... ..++..+++..
T Consensus 7 ~~~k~vlVtGas~gIG~~i----a~~l~~~---------------G~~V~~~~r~~~--~~~~~~~~l~~---------- 55 (253)
T PRK05867 7 LHGKRALITGASTGIGKRV----ALAYVEA---------------GAQVAIAARHLD--ALEKLADEIGT---------- 55 (253)
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHHC---------------CCEEEEEcCCHH--HHHHHHHHHHh----------
Confidence 4579999999644443333 3444322 567777777532 12222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++++++ .+|++||+|+..... +.+++.+++|+.|+..+++
T Consensus 56 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 126 (253)
T PRK05867 56 ---SGGKVVPVCCDVSQH------QQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQ 126 (253)
T ss_pred ---cCCeEEEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHH
Confidence 113678899999987 66665544 679999999875321 3345678899999999998
Q ss_pred HHHHc----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKEM----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
++... +.-.++|++||.+...... + .....|+.||+..+.
T Consensus 127 ~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------------------------------~----~~~~~Y~asKaal~~ 170 (253)
T PRK05867 127 AAAKAMVKQGQGGVIINTASMSGHIINV--------------------------------P----QQVSHYCASKAAVIH 170 (253)
T ss_pred HHHHHHHhcCCCcEEEEECcHHhcCCCC--------------------------------C----CCccchHHHHHHHHH
Confidence 86432 1124688988875321100 0 001579999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+.+..++||.+-.+
T Consensus 171 ~~~~la~e~~~~gI~vn~i~PG~v~t~ 197 (253)
T PRK05867 171 LTKAMAVELAPHKIRVNSVSPGYILTE 197 (253)
T ss_pred HHHHHHHHHhHhCeEEEEeecCCCCCc
Confidence 98876 24899999999988654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=7e-07 Score=92.51 Aligned_cols=114 Identities=17% Similarity=0.193 Sum_probs=79.9
Q ss_pred eeEEecCCCCCCCCCCHHhHHHHhc---CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHH-HccCCce
Q psy16243 259 MVAVTGDCLKPGVGINSEDRQTLVD---NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAK-EMKQLKS 327 (782)
Q Consensus 259 v~~i~gDi~~~~lGl~~~~~~~l~~---~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~-~~~~~~~ 327 (782)
+.++.+|+++. +.+.++++ .+|++||+|+..... +.++..+++|+.|+..++..+. .+..-.+
T Consensus 53 ~~~~~~D~~~~------~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~ 126 (237)
T PRK12742 53 ATAVQTDSADR------DAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGR 126 (237)
T ss_pred CeEEecCCCCH------HHHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCe
Confidence 45678898876 55555544 479999999874321 3456788999999999975544 3333468
Q ss_pred EEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCCC
Q psy16243 328 FVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGM 402 (782)
Q Consensus 328 fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~gl 402 (782)
+|++||.+....+ . +....|+.+|+..|.+++.. ..|+
T Consensus 127 iv~isS~~~~~~~--------------------------------~-----~~~~~Y~~sKaa~~~~~~~la~~~~~~gi 169 (237)
T PRK12742 127 IIIIGSVNGDRMP--------------------------------V-----AGMAAYAASKSALQGMARGLARDFGPRGI 169 (237)
T ss_pred EEEEeccccccCC--------------------------------C-----CCCcchHHhHHHHHHHHHHHHHHHhhhCe
Confidence 9999997542110 0 01168999999999988765 3479
Q ss_pred cEEEecCCeEEec
Q psy16243 403 PVAMVRPSIVIAT 415 (782)
Q Consensus 403 p~~IvRp~~v~G~ 415 (782)
.+.+++||.+..+
T Consensus 170 ~v~~v~Pg~~~t~ 182 (237)
T PRK12742 170 TINVVQPGPIDTD 182 (237)
T ss_pred EEEEEecCcccCC
Confidence 9999999888653
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.60 E-value=4.8e-07 Score=95.01 Aligned_cols=114 Identities=13% Similarity=0.201 Sum_probs=83.9
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++..+.+|++++ ++++.+++ .+|++||+||..... +.++..+++|+.|+.++++.+...
T Consensus 58 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 131 (253)
T PRK08993 58 RFLSLTADLRKI------DGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHF 131 (253)
T ss_pred eEEEEECCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 577899999987 66666655 479999999975321 446678999999999999886532
Q ss_pred ---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 ---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 ---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
+.-.++|++||...+.... .-..|+.||...|.+.+..
T Consensus 132 ~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~~la 173 (253)
T PRK08993 132 IAQGNGGKIINIASMLSFQGGI--------------------------------------RVPSYTASKSGVMGVTRLMA 173 (253)
T ss_pred HhCCCCeEEEEECchhhccCCC--------------------------------------CCcchHHHHHHHHHHHHHHH
Confidence 1125799999986553211 0147999999999888765
Q ss_pred ----CCCCcEEEecCCeEEec
Q psy16243 399 ----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G~ 415 (782)
..|+.+..++||.+-.+
T Consensus 174 ~e~~~~gi~v~~v~pG~v~T~ 194 (253)
T PRK08993 174 NEWAKHNINVNAIAPGYMATN 194 (253)
T ss_pred HHhhhhCeEEEEEeeCcccCc
Confidence 24889999999988653
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.60 E-value=5.2e-07 Score=95.90 Aligned_cols=164 Identities=15% Similarity=0.176 Sum_probs=107.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ .+.|.. .+.+|+++.|.. ...+...++.+
T Consensus 4 l~~k~vlItGas~gIG~ai----a~~l~~---------------~G~~vi~~~r~~---~~~~~~~~~~~---------- 51 (272)
T PRK08589 4 LENKVAVITGASTGIGQAS----AIALAQ---------------EGAYVLAVDIAE---AVSETVDKIKS---------- 51 (272)
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEeCcH---HHHHHHHHHHh----------
Confidence 3478999999654444333 233332 256788887762 22222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch--------hhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD--------AHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~--------~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ +++..+++ .+|++||+|+..... +.++..+++|+.|+..++
T Consensus 52 ---~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 122 (272)
T PRK08589 52 ---NGGKAKAYHVDISDE------QQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMT 122 (272)
T ss_pred ---cCCeEEEEEeecCCH------HHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence 113678899999987 66655554 469999999864311 234567889999998777
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+... ++ .++|++||...+... +....|+.||...+.
T Consensus 123 ~~~~~~~~~~~-g~iv~isS~~~~~~~--------------------------------------~~~~~Y~asKaal~~ 163 (272)
T PRK08589 123 KMLLPLMMEQG-GSIINTSSFSGQAAD--------------------------------------LYRSGYNAAKGAVIN 163 (272)
T ss_pred HHHHHHHHHcC-CEEEEeCchhhcCCC--------------------------------------CCCchHHHHHHHHHH
Confidence 774432 12 689999997644221 011679999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+++.. ..|+.+..+.||.|..+
T Consensus 164 l~~~la~e~~~~gI~v~~v~PG~v~T~ 190 (272)
T PRK08589 164 FTKSIAIEYGRDGIRANAIAPGTIETP 190 (272)
T ss_pred HHHHHHHHhhhcCeEEEEEecCcccCc
Confidence 98876 35899999999988754
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.7e-07 Score=94.61 Aligned_cols=169 Identities=18% Similarity=0.137 Sum_probs=104.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+...++.+.
T Consensus 10 ~~~k~vlItG~~g~iG~~l----a~~l~~---------------~G~~Vi~~~r~~~--~~~~~~~~l~~~--------- 59 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREA----ALTYAR---------------HGATVILLGRTEE--KLEAVYDEIEAA--------- 59 (247)
T ss_pred cCCCEEEEeCCCchHHHHH----HHHHHH---------------CCCcEEEEeCCHH--HHHHHHHHHHhc---------
Confidence 4589999999655444443 233322 1457888888632 111111222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh-------cCceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV-------DNIHVVFHCAATVRF--------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++..+ ++++.++. ..+|+|||+|+.... .+.+++.+++|+.|+.+++
T Consensus 60 ---~~~~~~~~~~d~~~~~----~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~ 132 (247)
T PRK08945 60 ---GGPQPAIIPLDLLTAT----PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLT 132 (247)
T ss_pred ---CCCCceEEEecccCCC----HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHH
Confidence 1235677788886421 13333332 357999999986422 1345678899999988888
Q ss_pred HHHHH---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKE---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+.. ..+..+||++||....... + ....|+.||+..|.
T Consensus 133 ~~~~~~l~~~~~~~iv~~ss~~~~~~~---------------------------------~-----~~~~Y~~sK~a~~~ 174 (247)
T PRK08945 133 QALLPLLLKSPAASLVFTSSSVGRQGR---------------------------------A-----NWGAYAVSKFATEG 174 (247)
T ss_pred HHHHHHHHhCCCCEEEEEccHhhcCCC---------------------------------C-----CCcccHHHHHHHHH
Confidence 87642 1256899999997533110 0 11579999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
++..+ ..++++.+++|+.+-++
T Consensus 175 ~~~~~~~~~~~~~i~~~~v~pg~v~t~ 201 (247)
T PRK08945 175 MMQVLADEYQGTNLRVNCINPGGTRTA 201 (247)
T ss_pred HHHHHHHHhcccCEEEEEEecCCccCc
Confidence 88775 23778888888877543
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=98.59 E-value=5.8e-07 Score=94.12 Aligned_cols=115 Identities=17% Similarity=0.227 Sum_probs=81.7
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH-
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE- 321 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~- 321 (782)
.++.++.+|++++ +++.++++ .+|+|||+|+.... .+.++..+++|+.|+..+++.+..
T Consensus 49 ~~~~~~~~Dl~~~------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 122 (254)
T TIGR02415 49 GKAVAYKLDVSDK------DQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQ 122 (254)
T ss_pred CeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 3678899999987 66655543 46999999987432 134556789999999888776543
Q ss_pred ---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 322 ---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 322 ---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
.+...++|++||.......+ ..+.|+.+|...|.+++..
T Consensus 123 ~~~~~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~l 164 (254)
T TIGR02415 123 FKKQGHGGKIINAASIAGHEGNP--------------------------------------ILSAYSSTKFAVRGLTQTA 164 (254)
T ss_pred HHhCCCCeEEEEecchhhcCCCC--------------------------------------CCcchHHHHHHHHHHHHHH
Confidence 22236899999865432110 0168999999999988754
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..++.+.+++||.+..+
T Consensus 165 ~~~~~~~~i~v~~v~Pg~i~t~ 186 (254)
T TIGR02415 165 AQELAPKGITVNAYCPGIVKTP 186 (254)
T ss_pred HHHhcccCeEEEEEecCcccCh
Confidence 24789999999988654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=1e-06 Score=105.71 Aligned_cols=166 Identities=16% Similarity=0.146 Sum_probs=110.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++..
T Consensus 369 ~~~k~vlItGas~giG~~l----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~~~---------- 417 (657)
T PRK07201 369 LVGKVVLITGASSGIGRAT----AIKVAE---------------AGATVFLVARNGE--ALDELVAEIRA---------- 417 (657)
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEECCHH--HHHHHHHHHHh----------
Confidence 4478999999654444333 233322 1567888888632 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc---------hhhHHHHHHhhHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF---------DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~L 315 (782)
...++.++.+|++++ ++++++++ .+|++||+|+.... .+..+..+++|+.|+.++
T Consensus 418 ---~~~~~~~~~~Dv~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 488 (657)
T PRK07201 418 ---KGGTAHAYTCDLTDS------AAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRL 488 (657)
T ss_pred ---cCCcEEEEEecCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHH
Confidence 113688899999998 67766665 57999999996311 134567789999999888
Q ss_pred HHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 316 LEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 316 le~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
++.+... .+..++|++||.+++.... ....|+.||+..+
T Consensus 489 ~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~ 530 (657)
T PRK07201 489 ILGLLPHMRERRFGHVVNVSSIGVQTNAP--------------------------------------RFSAYVASKAALD 530 (657)
T ss_pred HHHHHHhhhhcCCCEEEEECChhhcCCCC--------------------------------------CcchHHHHHHHHH
Confidence 7764321 2567899999987664311 0157999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.... ..|+.+++++||.|..+
T Consensus 531 ~~~~~la~e~~~~~i~v~~v~pg~v~T~ 558 (657)
T PRK07201 531 AFSDVAASETLSDGITFTTIHMPLVRTP 558 (657)
T ss_pred HHHHHHHHHHHhhCCcEEEEECCcCccc
Confidence 988765 35899999999988754
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.7e-06 Score=91.35 Aligned_cols=163 Identities=17% Similarity=0.202 Sum_probs=103.7
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+++++|||..+..|..+ .+.|.+ .+.+|+++.|... ...+...++ +
T Consensus 4 ~~~~vlItG~s~~iG~~i----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~-~----------- 50 (263)
T PRK09072 4 KDKRVLLTGASGGIGQAL----AEALAA---------------AGARLLLVGRNAE--KLEALAARL-P----------- 50 (263)
T ss_pred CCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEECCHH--HHHHHHHHH-h-----------
Confidence 468899999544444333 233322 2567888888632 111111111 1
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a 319 (782)
...++.++.+|++++ +++..+++ .+|+|||+|+...+. +.+...+++|+.|+.++++.+
T Consensus 51 --~~~~~~~~~~D~~d~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~ 122 (263)
T PRK09072 51 --YPGRHRWVVADLTSE------AGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRAL 122 (263)
T ss_pred --cCCceEEEEccCCCH------HHHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 123788899999987 66555543 579999999975431 344567889999999999887
Q ss_pred HHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 320 KEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 320 ~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
... ++..++|++||....... +....|+.||...+.++.
T Consensus 123 ~~~~~~~~~~~iv~isS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~ 164 (263)
T PRK09072 123 LPLLRAQPSAMVVNVGSTFGSIGY--------------------------------------PGYASYCASKFALRGFSE 164 (263)
T ss_pred HHHHHhcCCCEEEEecChhhCcCC--------------------------------------CCccHHHHHHHHHHHHHH
Confidence 532 234678998886532110 001569999998777765
Q ss_pred Hc-----CCCCcEEEecCCeEEe
Q psy16243 397 RG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G 414 (782)
.. ..++.+..+.||.+..
T Consensus 165 ~l~~~~~~~~i~v~~v~Pg~~~t 187 (263)
T PRK09072 165 ALRRELADTGVRVLYLAPRATRT 187 (263)
T ss_pred HHHHHhcccCcEEEEEecCcccc
Confidence 54 3478888888876654
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.2e-06 Score=91.48 Aligned_cols=113 Identities=18% Similarity=0.242 Sum_probs=81.2
Q ss_pred eeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHH----HHHHHHHHHH
Q psy16243 259 MVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLR----ATKALLEMAK 320 (782)
Q Consensus 259 v~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~----gt~~Lle~a~ 320 (782)
+..+.+|++++ ++++++++ .+|+|||+|+..... +.....+++|+. +++.+++.++
T Consensus 53 ~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 126 (251)
T PRK07069 53 AFAAVQDVTDE------AQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLR 126 (251)
T ss_pred EEEEEeecCCH------HHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 45678899987 66665554 469999999875432 234456788888 7788888887
Q ss_pred HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 321 EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 321 ~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
+. +..++|++||...+.... ....|+.+|...+.+++..
T Consensus 127 ~~-~~~~ii~~ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~ 167 (251)
T PRK07069 127 AS-QPASIVNISSVAAFKAEP--------------------------------------DYTAYNASKAAVASLTKSIAL 167 (251)
T ss_pred hc-CCcEEEEecChhhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHH
Confidence 65 568999999987653211 0157999999999888754
Q ss_pred -----CCCCcEEEecCCeEEecc
Q psy16243 399 -----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~~ 416 (782)
..++.+..++|+.+.++.
T Consensus 168 e~~~~~~~i~v~~v~pg~v~t~~ 190 (251)
T PRK07069 168 DCARRGLDVRCNSIHPTFIRTGI 190 (251)
T ss_pred HhcccCCcEEEEEEeecccCCcc
Confidence 124788899998887653
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=7.6e-07 Score=93.29 Aligned_cols=164 Identities=16% Similarity=0.195 Sum_probs=106.5
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++.+
T Consensus 6 ~~k~ilItGas~~iG~~i----a~~l~~---------------~G~~v~~~~r~~~~--~~~~~~~~~~----------- 53 (253)
T PRK06172 6 SGKVALVTGGAAGIGRAT----ALAFAR---------------EGAKVVVADRDAAG--GEETVALIRE----------- 53 (253)
T ss_pred CCCEEEEeCCCchHHHHH----HHHHHH---------------cCCEEEEEeCCHHH--HHHHHHHHHh-----------
Confidence 478999999655444333 233322 14678888886431 1122222111
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----c----hhhHHHHHHhhHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----F----DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++..+.+|++++ +++..+++ .+|+|||+|+... + .+.+++.+++|+.++..+++
T Consensus 54 --~~~~~~~~~~D~~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 125 (253)
T PRK06172 54 --AGGEALFVACDVTRD------AEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMK 125 (253)
T ss_pred --cCCceEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence 123688999999987 66666554 4599999998632 1 13455678899999987766
Q ss_pred HHH----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAK----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+. +. +..++|++||...+.... . ...|+.||...|.
T Consensus 126 ~~~~~~~~~-~~~~ii~~sS~~~~~~~~---------------------------------~-----~~~Y~~sKaa~~~ 166 (253)
T PRK06172 126 YQIPLMLAQ-GGGAIVNTASVAGLGAAP---------------------------------K-----MSIYAASKHAVIG 166 (253)
T ss_pred HHHHHHHhc-CCcEEEEECchhhccCCC---------------------------------C-----CchhHHHHHHHHH
Confidence 532 22 456899999986543211 0 1679999999998
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+.+..+.||.|-.+
T Consensus 167 ~~~~la~e~~~~~i~v~~i~PG~v~t~ 193 (253)
T PRK06172 167 LTKSAAIEYAKKGIRVNAVCPAVIDTD 193 (253)
T ss_pred HHHHHHHHhcccCeEEEEEEeCCccCh
Confidence 88765 24799999999987654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=6.1e-07 Score=94.15 Aligned_cols=163 Identities=15% Similarity=0.159 Sum_probs=107.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+.+|..+ .+.|... +.+|.+..|... ....+.+++
T Consensus 6 l~~k~~lItGas~gIG~ai----a~~l~~~---------------G~~vv~~~~~~~-~~~~~~~~~------------- 52 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGM----AIGLAKA---------------GADIVGVGVAEA-PETQAQVEA------------- 52 (251)
T ss_pred cCCCEEEEeCCCchHHHHH----HHHHHHC---------------CCEEEEecCchH-HHHHHHHHH-------------
Confidence 3479999999655444433 3334322 566766666422 111111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+..+.+
T Consensus 53 ---~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~ 123 (251)
T PRK12481 53 ---LGRKFHFITADLIQQ------KDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQ 123 (251)
T ss_pred ---cCCeEEEEEeCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHH
Confidence 123678899999998 77766665 47999999986432 14456788999999998888
Q ss_pred HHHHc----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKEM----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+... +.-.++|++||...+.... . ...|+.||...+.
T Consensus 124 ~~~~~~~~~~~~g~ii~isS~~~~~~~~---------------------------------~-----~~~Y~asK~a~~~ 165 (251)
T PRK12481 124 AVAKQFVKQGNGGKIINIASMLSFQGGI---------------------------------R-----VPSYTASKSAVMG 165 (251)
T ss_pred HHHHHHHHcCCCCEEEEeCChhhcCCCC---------------------------------C-----CcchHHHHHHHHH
Confidence 76432 1135899999986543210 0 1479999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEe
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+.+.. ..|+++..++||.+-.
T Consensus 166 l~~~la~e~~~~girvn~v~PG~v~t 191 (251)
T PRK12481 166 LTRALATELSQYNINVNAIAPGYMAT 191 (251)
T ss_pred HHHHHHHHHhhcCeEEEEEecCCCcc
Confidence 88765 3589999999998764
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.8e-06 Score=94.43 Aligned_cols=166 Identities=14% Similarity=0.148 Sum_probs=105.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++..
T Consensus 5 l~~k~vlITGAs~GIG~ai----a~~la~---------------~G~~Vvl~~R~~~--~l~~~~~~~~~---------- 53 (330)
T PRK06139 5 LHGAVVVITGASSGIGQAT----AEAFAR---------------RGARLVLAARDEE--ALQAVAEECRA---------- 53 (330)
T ss_pred CCCCEEEEcCCCCHHHHHH----HHHHHH---------------CCCEEEEEECCHH--HHHHHHHHHHh----------
Confidence 3478999999655444333 233322 2567888887532 12221222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc---h----hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF---D----AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f---~----~~~~~~~~~Nv~gt~~Lle 317 (782)
.-.++.++.+|++++ ++++++++ .+|++||+|+...+ . +..+..+++|+.|+.++.+
T Consensus 54 ---~g~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~ 124 (330)
T PRK06139 54 ---LGAEVLVVPTDVTDA------DQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAH 124 (330)
T ss_pred ---cCCcEEEEEeeCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHH
Confidence 113677889999987 67766653 57999999986432 1 3345678999999998877
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+..++|++||...+... +....|+.||+..+.+
T Consensus 125 ~~lp~~~~~~~g~iV~isS~~~~~~~--------------------------------------p~~~~Y~asKaal~~~ 166 (330)
T PRK06139 125 AALPIFKKQGHGIFINMISLGGFAAQ--------------------------------------PYAAAYSASKFGLRGF 166 (330)
T ss_pred HHHHHHHHcCCCEEEEEcChhhcCCC--------------------------------------CCchhHHHHHHHHHHH
Confidence 75321 134689999987644221 0116799999965554
Q ss_pred HH----HcC--CCCcEEEecCCeEEec
Q psy16243 395 VR----RGG--AGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~----~~~--~glp~~IvRp~~v~G~ 415 (782)
.. +.. .++.++.+.||.+..|
T Consensus 167 ~~sL~~El~~~~gI~V~~v~Pg~v~T~ 193 (330)
T PRK06139 167 SEALRGELADHPDIHVCDVYPAFMDTP 193 (330)
T ss_pred HHHHHHHhCCCCCeEEEEEecCCccCc
Confidence 44 433 3789999999888764
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=9.5e-07 Score=93.40 Aligned_cols=114 Identities=14% Similarity=0.196 Sum_probs=84.5
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++.++.+|++++ ++++.+++ .+|++||+||.... .+.+...+++|+.|+..+.+.+...
T Consensus 60 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 133 (265)
T PRK07097 60 EAHGYVCDVTDE------DGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSM 133 (265)
T ss_pred ceEEEEcCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 688899999988 66666554 37999999997532 1345567889999999888775431
Q ss_pred --cCCceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 --KQLKSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 --~~~~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+..++|++||.... +.. ....|+.+|...+.+++.+
T Consensus 134 ~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sKaal~~l~~~la 174 (265)
T PRK07097 134 IKKGHGKIINICSMMSELGRE---------------------------------------TVSAYAAAKGGLKMLTKNIA 174 (265)
T ss_pred HhcCCcEEEEEcCccccCCCC---------------------------------------CCccHHHHHHHHHHHHHHHH
Confidence 246789999997432 210 0167999999999998876
Q ss_pred ----CCCCcEEEecCCeEEecc
Q psy16243 399 ----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G~~ 416 (782)
..|+.+..++||.+..+.
T Consensus 175 ~e~~~~gi~v~~v~Pg~v~t~~ 196 (265)
T PRK07097 175 SEYGEANIQCNGIGPGYIATPQ 196 (265)
T ss_pred HHhhhcCceEEEEEeccccccc
Confidence 248999999999998764
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=7e-07 Score=92.42 Aligned_cols=116 Identities=13% Similarity=0.090 Sum_probs=82.3
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccC----c----hhhHHHHHHhhHHHHHHHHHHHHHc---cCCc
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVR----F----DAHLKVAVSINLRATKALLEMAKEM---KQLK 326 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~Lle~a~~~---~~~~ 326 (782)
++.++.+|++++ -+...+....+|+|||+|+... + .+.+++.+++|+.|+.++++.+... .+..
T Consensus 46 ~~~~~~~D~~~~-----~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 120 (235)
T PRK06550 46 NFHFLQLDLSDD-----LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSG 120 (235)
T ss_pred cEEEEECChHHH-----HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc
Confidence 577889999876 1333344457899999998532 1 1345578899999999999987532 2346
Q ss_pred eEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCC
Q psy16243 327 SFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAG 401 (782)
Q Consensus 327 ~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~g 401 (782)
++|++||.+...... ....|+.+|...+.+.... ..|
T Consensus 121 ~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~g 162 (235)
T PRK06550 121 IIINMCSIASFVAGG--------------------------------------GGAAYTASKHALAGFTKQLALDYAKDG 162 (235)
T ss_pred EEEEEcChhhccCCC--------------------------------------CCcccHHHHHHHHHHHHHHHHHhhhcC
Confidence 899999986542110 1157999999988877654 348
Q ss_pred CcEEEecCCeEEecc
Q psy16243 402 MPVAMVRPSIVIATN 416 (782)
Q Consensus 402 lp~~IvRp~~v~G~~ 416 (782)
+++++++||.+.++.
T Consensus 163 i~v~~v~pg~v~t~~ 177 (235)
T PRK06550 163 IQVFGIAPGAVKTPM 177 (235)
T ss_pred eEEEEEeeCCccCcc
Confidence 999999999887653
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=7.7e-07 Score=92.91 Aligned_cols=115 Identities=20% Similarity=0.220 Sum_probs=80.2
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc----h----hhHHHHHHhhHHHHHHHHHH-HH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF----D----AHLKVAVSINLRATKALLEM-AK 320 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f----~----~~~~~~~~~Nv~gt~~Lle~-a~ 320 (782)
.++.++.+|++++ +++..+++ .+|+|||+|+.... . +.+...+++|+.|+..+++. +.
T Consensus 52 ~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (248)
T PRK06947 52 GRACVVAGDVANE------ADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAAR 125 (248)
T ss_pred CcEEEEEeccCCH------HHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 3688999999987 66655443 57999999986421 1 23446788999999988754 33
Q ss_pred HccC-----CceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 321 EMKQ-----LKSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 321 ~~~~-----~~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+.. -.++|++||.... +... . ...|+.||...+.+
T Consensus 126 ~~~~~~~~~~~~ii~~sS~~~~~~~~~-------------------------------------~-~~~Y~~sK~~~~~~ 167 (248)
T PRK06947 126 RLSTDRGGRGGAIVNVSSIASRLGSPN-------------------------------------E-YVDYAGSKGAVDTL 167 (248)
T ss_pred HHHhcCCCCCcEEEEECchhhcCCCCC-------------------------------------C-CcccHhhHHHHHHH
Confidence 3311 2359999987543 2210 0 04699999999988
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+... ..+++++++|||.+..+
T Consensus 168 ~~~la~~~~~~~i~v~~i~Pg~v~t~ 193 (248)
T PRK06947 168 TLGLAKELGPHGVRVNAVRPGLIETE 193 (248)
T ss_pred HHHHHHHhhhhCcEEEEEeccCcccc
Confidence 7665 24899999999998764
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.7e-06 Score=89.20 Aligned_cols=113 Identities=15% Similarity=0.031 Sum_probs=84.2
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC---ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHccCCc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN---IHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEMKQLK 326 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~---vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~ 326 (782)
.+++++.+|++++ +++..+++. +|++||+|+.... .+.....+++|+.|+.+++++... .+..
T Consensus 45 ~~~~~~~~Dl~~~------~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~g 117 (230)
T PRK07041 45 APVRTAALDITDE------AAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARI-APGG 117 (230)
T ss_pred CceEEEEccCCCH------HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhh-cCCe
Confidence 3678899999988 777777764 6999999986432 134567889999999999995543 4668
Q ss_pred eEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC---CCCc
Q psy16243 327 SFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG---AGMP 403 (782)
Q Consensus 327 ~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~---~glp 403 (782)
++|++||...+.... ..+.|+.+|...|.+.+... .++.
T Consensus 118 ~iv~~ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~ir 159 (230)
T PRK07041 118 SLTFVSGFAAVRPSA--------------------------------------SGVLQGAINAALEALARGLALELAPVR 159 (230)
T ss_pred EEEEECchhhcCCCC--------------------------------------cchHHHHHHHHHHHHHHHHHHHhhCce
Confidence 999999987653210 11679999999999987762 2467
Q ss_pred EEEecCCeEEe
Q psy16243 404 VAMVRPSIVIA 414 (782)
Q Consensus 404 ~~IvRp~~v~G 414 (782)
+..++|+.+-.
T Consensus 160 v~~i~pg~~~t 170 (230)
T PRK07041 160 VNTVSPGLVDT 170 (230)
T ss_pred EEEEeeccccc
Confidence 77777776654
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=2e-06 Score=89.05 Aligned_cols=163 Identities=17% Similarity=0.188 Sum_probs=104.1
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHH-HHhhcccccccccccC
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMA-KEMKQLKFFDPMRKRC 252 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl-~~~~~~~~f~~l~~~~ 252 (782)
+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... .+.+ ++...
T Consensus 5 ~~~vlItGa~g~iG~~~----a~~l~~---------------~G~~V~~~~r~~~~---~~~~~~~~~~----------- 51 (238)
T PRK05786 5 GKKVAIIGVSEGLGYAV----AYFALK---------------EGAQVCINSRNENK---LKRMKKTLSK----------- 51 (238)
T ss_pred CcEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHHH---HHHHHHHHHh-----------
Confidence 68999999654444333 233321 25688888886421 1222 11110
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-----hhHHHHHHhhHHHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-----AHLKVAVSINLRATKALLEMAK 320 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-----~~~~~~~~~Nv~gt~~Lle~a~ 320 (782)
..++.++.+|++++ ++++++++ .+|.++|+|+..... +.++..+++|+.++..+++.+.
T Consensus 52 ---~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 122 (238)
T PRK05786 52 ---YGNIHYVVGDVSST------ESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASL 122 (238)
T ss_pred ---cCCeEEEECCCCCH------HHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 12578899999987 55555443 469999999854321 3345668899999888888765
Q ss_pred Hc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 321 EM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 321 ~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+ ..-.++|++||....... . +....|+.+|...+.+++..
T Consensus 123 ~~~~~~~~iv~~ss~~~~~~~--------------------------------~-----~~~~~Y~~sK~~~~~~~~~~~ 165 (238)
T PRK05786 123 RFLKEGSSIVLVSSMSGIYKA--------------------------------S-----PDQLSYAVAKAGLAKAVEILA 165 (238)
T ss_pred HHHhcCCEEEEEecchhcccC--------------------------------C-----CCchHHHHHHHHHHHHHHHHH
Confidence 43 122578999886432110 0 01156999999988777665
Q ss_pred ----CCCCcEEEecCCeEEec
Q psy16243 399 ----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G~ 415 (782)
..+++++++||+.++++
T Consensus 166 ~~~~~~gi~v~~i~pg~v~~~ 186 (238)
T PRK05786 166 SELLGRGIRVNGIAPTTISGD 186 (238)
T ss_pred HHHhhcCeEEEEEecCccCCC
Confidence 34899999999999875
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=9.4e-07 Score=93.27 Aligned_cols=162 Identities=19% Similarity=0.192 Sum_probs=107.0
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..++.
T Consensus 5 ~~k~vlItGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~------------- 50 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAV----ARALVA---------------AGARVAIVDIDAD--NGAAVAASL------------- 50 (261)
T ss_pred CCCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHh-------------
Confidence 478999999655444433 233322 2567888877532 111111111
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
..++.++.+|++++ +++.++++ .+|++||+|+.... .+.+++.+++|+.|+..+++.+
T Consensus 51 ---~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 121 (261)
T PRK08265 51 ---GERARFIATDITDD------AAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAA 121 (261)
T ss_pred ---CCeeEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHH
Confidence 13688899999987 66766654 46999999986421 2445678899999999999876
Q ss_pred HHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 320 KEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 320 ~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
... ++-.++|++||....... +. ...|+.+|...+.+.+.
T Consensus 122 ~~~~~~~~g~ii~isS~~~~~~~---------------------------------~~-----~~~Y~asKaa~~~~~~~ 163 (261)
T PRK08265 122 HPHLARGGGAIVNFTSISAKFAQ---------------------------------TG-----RWLYPASKAAIRQLTRS 163 (261)
T ss_pred HHHHhcCCcEEEEECchhhccCC---------------------------------CC-----CchhHHHHHHHHHHHHH
Confidence 532 233689999997543210 00 15799999999988876
Q ss_pred c-----CCCCcEEEecCCeEEec
Q psy16243 398 G-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G~ 415 (782)
. ..|+.+..++||.+..+
T Consensus 164 la~e~~~~gi~vn~v~PG~~~t~ 186 (261)
T PRK08265 164 MAMDLAPDGIRVNSVSPGWTWSR 186 (261)
T ss_pred HHHHhcccCEEEEEEccCCccCh
Confidence 5 24899999999877643
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=1e-06 Score=92.57 Aligned_cols=161 Identities=17% Similarity=0.135 Sum_probs=101.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|.++.|.... ..+...++
T Consensus 5 ~~~~~vlItGasggIG~~~----a~~l~~---------------~G~~v~~~~r~~~~--~~~~~~~~------------ 51 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLAT----ARRLAA---------------EGATVVVGDIDPEA--GKAAADEV------------ 51 (255)
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHH---------------cCCEEEEEeCCHHH--HHHHHHHc------------
Confidence 4578999999665555444 233322 14677777775321 11111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch---------hhHHHHHHhhHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD---------AHLKVAVSINLRATKAL 315 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~---------~~~~~~~~~Nv~gt~~L 315 (782)
+..++.+|++++ ++++++++ .+|+|||+|+..... +.++..+++|+.|+..+
T Consensus 52 ------~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l 119 (255)
T PRK06057 52 ------GGLFVPTDVTDE------DAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLC 119 (255)
T ss_pred ------CCcEEEeeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHH
Confidence 114678899987 66666665 469999999864321 23567888999999888
Q ss_pred HHHHHH-c--cCCceEEEEecce-eccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 316 LEMAKE-M--KQLKSFVHVSTAY-SNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 316 le~a~~-~--~~~~~fV~vST~~-v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
++.+.. + .+..++|++||.. +++... ....|+.||+..
T Consensus 120 ~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~--------------------------------------~~~~Y~~sKaal 161 (255)
T PRK06057 120 CKAALPHMVRQGKGSIINTASFVAVMGSAT--------------------------------------SQISYTASKGGV 161 (255)
T ss_pred HHHHHHHHHHhCCcEEEEEcchhhccCCCC--------------------------------------CCcchHHHHHHH
Confidence 776532 1 1346899998864 333210 015799999766
Q ss_pred HHHHHH----c-CCCCcEEEecCCeEEec
Q psy16243 392 EDMVRR----G-GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 392 E~ll~~----~-~~glp~~IvRp~~v~G~ 415 (782)
+.+... + ..|+.++++|||.+.++
T Consensus 162 ~~~~~~l~~~~~~~gi~v~~i~pg~v~t~ 190 (255)
T PRK06057 162 LAMSRELGVQFARQGIRVNALCPGPVNTP 190 (255)
T ss_pred HHHHHHHHHHHHhhCcEEEEEeeCCcCCc
Confidence 665553 3 35899999999998765
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.3e-06 Score=91.27 Aligned_cols=114 Identities=14% Similarity=0.135 Sum_probs=81.5
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC--------ceEEEEcCcccC---------c----hhhHHHHHHhhHHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN--------IHVVFHCAATVR---------F----DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~--------vdiViH~Aa~v~---------f----~~~~~~~~~~Nv~gt~~L 315 (782)
.++.++.+|++++ +++..++++ +|++||+|+... + .+.+.+.+++|+.|+..+
T Consensus 52 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l 125 (253)
T PRK08642 52 DRAIALQADVTDR------EQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNT 125 (253)
T ss_pred CceEEEEcCCCCH------HHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHH
Confidence 3688899999987 666655543 899999997521 1 133456789999999999
Q ss_pred HHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 316 LEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 316 le~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
++.+... .+..++|++||....... ...+.|+.||...|
T Consensus 126 ~~~~~~~~~~~~~g~iv~iss~~~~~~~--------------------------------------~~~~~Y~~sK~a~~ 167 (253)
T PRK08642 126 IQAALPGMREQGFGRIINIGTNLFQNPV--------------------------------------VPYHDYTTAKAALL 167 (253)
T ss_pred HHHHHHHHHhcCCeEEEEECCccccCCC--------------------------------------CCccchHHHHHHHH
Confidence 9997531 245689999985422110 01168999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
.+++.. ..++.+..++||.+..
T Consensus 168 ~l~~~la~~~~~~~i~v~~i~pG~v~t 194 (253)
T PRK08642 168 GLTRNLAAELGPYGITVNMVSGGLLRT 194 (253)
T ss_pred HHHHHHHHHhCccCeEEEEEeecccCC
Confidence 999886 2478888888887754
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.9e-06 Score=90.31 Aligned_cols=152 Identities=17% Similarity=0.186 Sum_probs=99.3
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHH-HHhhcccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMA-KEMKQLKFFDPM 248 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl-~~~~~~~~f~~l 248 (782)
..|.+|+|+|||+. +|+..+.-..|. +. +.++++++|.... .+++ +++.+.
T Consensus 8 e~~~~kvVvITGAS----sGIG~~lA~~la----------~~-----G~~l~lvar~~rr---l~~v~~~l~~~------ 59 (282)
T KOG1205|consen 8 ERLAGKVVLITGAS----SGIGEALAYELA----------KR-----GAKLVLVARRARR---LERVAEELRKL------ 59 (282)
T ss_pred HHhCCCEEEEeCCC----cHHHHHHHHHHH----------hC-----CCceEEeehhhhh---HHHHHHHHHHh------
Confidence 35779999999974 555333333332 22 6677788886442 2333 222211
Q ss_pred cccCcccccceeEEecCCCCCCCCCCHHhHHHH-------hcCceEEEEcCcccCch-------hhHHHHHHhhHHHHHH
Q psy16243 249 RKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTL-------VDNIHVVFHCAATVRFD-------AHLKVAVSINLRATKA 314 (782)
Q Consensus 249 ~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l-------~~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~ 314 (782)
.+.. ++..+.+|+++. ++..+. +.++|+.||+||..... +.....+++|+.|+-.
T Consensus 60 ---~~~~--~v~~~~~Dvs~~------~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~ 128 (282)
T KOG1205|consen 60 ---GSLE--KVLVLQLDVSDE------ESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVY 128 (282)
T ss_pred ---CCcC--ccEEEeCccCCH------HHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHH
Confidence 1111 799999999998 666533 45789999999985421 3345688999999998
Q ss_pred HHHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 315 LLEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 315 Lle~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
+..++... .+--++|.+||+...-.. +....|..||++-
T Consensus 129 ~Tk~alp~m~~r~~GhIVvisSiaG~~~~--------------------------------------P~~~~Y~ASK~Al 170 (282)
T KOG1205|consen 129 LTKAALPSMKKRNDGHIVVISSIAGKMPL--------------------------------------PFRSIYSASKHAL 170 (282)
T ss_pred HHHHHHHHhhhcCCCeEEEEeccccccCC--------------------------------------CcccccchHHHHH
Confidence 88875322 134689999998643221 1114899999999
Q ss_pred HHHHHHc
Q psy16243 392 EDMVRRG 398 (782)
Q Consensus 392 E~ll~~~ 398 (782)
+.+....
T Consensus 171 ~~f~etL 177 (282)
T KOG1205|consen 171 EGFFETL 177 (282)
T ss_pred HHHHHHH
Confidence 9888766
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=8.3e-07 Score=93.83 Aligned_cols=112 Identities=18% Similarity=0.127 Sum_probs=82.3
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc----------------hhhHHHHHHhhHHHHHH
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF----------------DAHLKVAVSINLRATKA 314 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f----------------~~~~~~~~~~Nv~gt~~ 314 (782)
++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+..
T Consensus 50 ~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 123 (266)
T PRK06171 50 NYQFVPTDVSSA------EEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFL 123 (266)
T ss_pred ceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHH
Confidence 577889999987 66666554 46999999986321 13345688999999999
Q ss_pred HHHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 315 LLEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 315 Lle~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
+++++... .+-.++|++||........ ....|+.||...
T Consensus 124 l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~ 165 (266)
T PRK06171 124 MSQAVARQMVKQHDGVIVNMSSEAGLEGSE--------------------------------------GQSCYAATKAAL 165 (266)
T ss_pred HHHHHHHHHHhcCCcEEEEEccccccCCCC--------------------------------------CCchhHHHHHHH
Confidence 99887642 1335799999986542210 016799999999
Q ss_pred HHHHHHc-----CCCCcEEEecCCeEE
Q psy16243 392 EDMVRRG-----GAGMPVAMVRPSIVI 413 (782)
Q Consensus 392 E~ll~~~-----~~glp~~IvRp~~v~ 413 (782)
+.+++.. ..|+++.+++||.+.
T Consensus 166 ~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 166 NSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred HHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 9988776 348999999999874
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.1e-06 Score=92.83 Aligned_cols=165 Identities=20% Similarity=0.198 Sum_probs=106.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 7 ~~~k~ilItGasggIG~~l----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~---------- 55 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGI----AQAFAR---------------AGANVAVASRSQEK--VDAAVAQLQQ---------- 55 (264)
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHH----------
Confidence 3478999999655444433 223321 25678888876331 1111111110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ +++..+++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 56 ---~~~~~~~~~~Dv~~~------~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~ 126 (264)
T PRK07576 56 ---AGPEGLGVSADVRDY------AAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLK 126 (264)
T ss_pred ---hCCceEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence 112567889999987 66666554 36999999975321 13455678899999999998
Q ss_pred HHHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 318 MAKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 318 ~a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
++... ++-.++|++||....... + ....|+.||...|.++
T Consensus 127 ~~~~~l~~~~g~iv~iss~~~~~~~---------------------------------~-----~~~~Y~asK~a~~~l~ 168 (264)
T PRK07576 127 AAYPLLRRPGASIIQISAPQAFVPM---------------------------------P-----MQAHVCAAKAGVDMLT 168 (264)
T ss_pred HHHHHHHhCCCEEEEECChhhccCC---------------------------------C-----CccHHHHHHHHHHHHH
Confidence 87542 122589999997543210 0 0157999999999998
Q ss_pred HHc-----CCCCcEEEecCCeEEe
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G 414 (782)
+.. ..++.+..++|+.+.+
T Consensus 169 ~~la~e~~~~gi~v~~v~pg~~~~ 192 (264)
T PRK07576 169 RTLALEWGPEGIRVNSIVPGPIAG 192 (264)
T ss_pred HHHHHHhhhcCeEEEEEecccccC
Confidence 865 2578999999998764
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.5e-06 Score=92.43 Aligned_cols=169 Identities=12% Similarity=0.129 Sum_probs=103.9
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchh-hHHHHHHHhhccccccccccc
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATK-ALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~-~~~erl~~~~~~~~f~~l~~~ 251 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|..... .....+++..+. +.
T Consensus 5 ~~k~vlItGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~~~~~~~~l~~~~~~-----~~-- 58 (273)
T PRK08278 5 SGKTLFITGASRGIGLAI----ALRAAR---------------DGANIVIAAKTAEPHPKLPGTIHTAAEE-----IE-- 58 (273)
T ss_pred CCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEecccccccchhhHHHHHHHH-----HH--
Confidence 468999999655444443 223321 156788888764321 111111111100 00
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
....++.++.+|++++ +++..+++ .+|+|||+||..... +..+..+++|+.|+.++++
T Consensus 59 --~~~~~~~~~~~D~~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~ 130 (273)
T PRK08278 59 --AAGGQALPLVGDVRDE------DQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQ 130 (273)
T ss_pred --hcCCceEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHH
Confidence 0123678899999998 66666554 579999999974321 2345678899999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+-.++|++||...... .+. +....|+.||.+.|.+
T Consensus 131 ~~~~~~~~~~~g~iv~iss~~~~~~-----------------------------------~~~-~~~~~Y~~sK~a~~~~ 174 (273)
T PRK08278 131 ACLPHLKKSENPHILTLSPPLNLDP-----------------------------------KWF-APHTAYTMAKYGMSLC 174 (273)
T ss_pred HHHHHHHhcCCCEEEEECCchhccc-----------------------------------ccc-CCcchhHHHHHHHHHH
Confidence 98642 12347888887531100 000 0116899999999999
Q ss_pred HHHc-----CCCCcEEEecCCe
Q psy16243 395 VRRG-----GAGMPVAMVRPSI 411 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~ 411 (782)
++.+ ..++.+..+.|+.
T Consensus 175 ~~~la~el~~~~I~v~~i~Pg~ 196 (273)
T PRK08278 175 TLGLAEEFRDDGIAVNALWPRT 196 (273)
T ss_pred HHHHHHHhhhcCcEEEEEeCCC
Confidence 9876 2478888888873
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.4e-06 Score=91.30 Aligned_cols=163 Identities=20% Similarity=0.216 Sum_probs=104.9
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+..|..+ .+.|.. .+.+|++..|... ...+...++..
T Consensus 1 ~k~~lItG~s~giG~~i----a~~l~~---------------~G~~Vi~~~r~~~--~~~~~~~~~~~------------ 47 (252)
T PRK07677 1 EKVVIITGGSSGMGKAM----AKRFAE---------------EGANVVITGRTKE--KLEEAKLEIEQ------------ 47 (252)
T ss_pred CCEEEEeCCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHh------------
Confidence 47899999655444433 233321 2567888877632 11111111110
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
...++.++.+|++++ ++++++++ .+|+|||+|+.... .+.++..+++|+.|+.++++++
T Consensus 48 -~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 120 (252)
T PRK07677 48 -FPGQVLTVQMDVRNP------EDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAV 120 (252)
T ss_pred -cCCcEEEEEecCCCH------HHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHH
Confidence 113688999999987 66665553 46999999985321 1335668999999999999987
Q ss_pred HHc---cC-CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 320 KEM---KQ-LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 320 ~~~---~~-~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
... ++ ..++|++||.+..... .....|+.||...+.+.
T Consensus 121 ~~~~~~~~~~g~ii~isS~~~~~~~--------------------------------------~~~~~Y~~sKaa~~~~~ 162 (252)
T PRK07677 121 GKYWIEKGIKGNIINMVATYAWDAG--------------------------------------PGVIHSAAAKAGVLAMT 162 (252)
T ss_pred HHHHHhcCCCEEEEEEcChhhccCC--------------------------------------CCCcchHHHHHHHHHHH
Confidence 432 12 3589999988543210 01157999999999887
Q ss_pred HHc----C--CCCcEEEecCCeEEe
Q psy16243 396 RRG----G--AGMPVAMVRPSIVIA 414 (782)
Q Consensus 396 ~~~----~--~glp~~IvRp~~v~G 414 (782)
+.. . .|+++..++||.+..
T Consensus 163 ~~la~e~~~~~gi~v~~v~PG~v~~ 187 (252)
T PRK07677 163 RTLAVEWGRKYGIRVNAIAPGPIER 187 (252)
T ss_pred HHHHHHhCcccCeEEEEEeeccccc
Confidence 753 2 489999999998874
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.9e-06 Score=91.06 Aligned_cols=166 Identities=15% Similarity=0.130 Sum_probs=106.6
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|... +.+|++..|.... ..+..+++...
T Consensus 6 l~~k~~lItGas~gIG~ai----a~~l~~~---------------G~~V~~~~r~~~~--~~~~~~~~~~~--------- 55 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGV----ARVLARA---------------GADVILLSRNEEN--LKKAREKIKSE--------- 55 (263)
T ss_pred CCCCEEEEeCCCCcHHHHH----HHHHHHC---------------CCEEEEEeCCHHH--HHHHHHHHHhh---------
Confidence 4578999999654444333 3344322 5678888775321 22222221110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+..+.+.
T Consensus 56 ---~~~~~~~~~~Dv~~~------~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 126 (263)
T PRK08339 56 ---SNVDVSYIVADLTKR------EDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRA 126 (263)
T ss_pred ---cCCceEEEEecCCCH------HHHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 013688999999998 67766665 47999999986432 144567788998887666655
Q ss_pred H----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 319 A----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 319 a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+ ++. +..++|++||....... | ....|+.+|...+.+
T Consensus 127 ~l~~m~~~-~~g~Ii~isS~~~~~~~---------------------------------~-----~~~~y~asKaal~~l 167 (263)
T PRK08339 127 LVPAMERK-GFGRIIYSTSVAIKEPI---------------------------------P-----NIALSNVVRISMAGL 167 (263)
T ss_pred HHHHHHHc-CCCEEEEEcCccccCCC---------------------------------C-----cchhhHHHHHHHHHH
Confidence 3 332 45689999998653211 0 014699999998888
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..+.||.|-.+
T Consensus 168 ~~~la~el~~~gIrVn~v~PG~v~T~ 193 (263)
T PRK08339 168 VRTLAKELGPKGITVNGIMPGIIRTD 193 (263)
T ss_pred HHHHHHHhcccCeEEEEEEeCcCccH
Confidence 7765 35899999999888653
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.4e-06 Score=88.75 Aligned_cols=170 Identities=14% Similarity=0.150 Sum_probs=103.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.+ .+.+|+++.|... ...+...++.+.
T Consensus 4 l~~k~vlItG~sggiG~~l----a~~l~~---------------~g~~V~~~~r~~~--~~~~~~~~l~~~--------- 53 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQV----AKAYAA---------------AGATVILVARHQK--KLEKVYDAIVEA--------- 53 (239)
T ss_pred CCCCEEEEECCCCcHHHHH----HHHHHH---------------cCCEEEEEeCChH--HHHHHHHHHHHc---------
Confidence 4568999999654444433 223321 2567888888643 122222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh--------cCceEEEEcCcccC----ch----hhHHHHHHhhHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV--------DNIHVVFHCAATVR----FD----AHLKVAVSINLRATKAL 315 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~--------~~vdiViH~Aa~v~----f~----~~~~~~~~~Nv~gt~~L 315 (782)
...++..+.+|+++.. .+++..+. ..+|+|||+|+... +. +.+.+.+++|+.|+..+
T Consensus 54 ---~~~~~~~~~~D~~~~~----~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l 126 (239)
T PRK08703 54 ---GHPEPFAIRFDLMSAE----EKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGL 126 (239)
T ss_pred ---CCCCcceEEeeecccc----hHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHH
Confidence 0124567788887531 12333322 45799999999632 11 33456789999999988
Q ss_pred HHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 316 LEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 316 le~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
++.+... .+..++|++||...... . +....|+.||+..|
T Consensus 127 ~~~~~~~~~~~~~~~iv~~ss~~~~~~---------------------------------~-----~~~~~Y~~sKaa~~ 168 (239)
T PRK08703 127 TRALFPLLKQSPDASVIFVGESHGETP---------------------------------K-----AYWGGFGASKAALN 168 (239)
T ss_pred HHHHHHHHHhCCCCEEEEEeccccccC---------------------------------C-----CCccchHHhHHHHH
Confidence 8876432 13468999988543210 0 01157999999999
Q ss_pred HHHHHc----C-C-CCcEEEecCCeEEecc
Q psy16243 393 DMVRRG----G-A-GMPVAMVRPSIVIATN 416 (782)
Q Consensus 393 ~ll~~~----~-~-glp~~IvRp~~v~G~~ 416 (782)
.+++.. . . ++.+.+++||.+.+|.
T Consensus 169 ~~~~~la~e~~~~~~i~v~~v~pG~v~t~~ 198 (239)
T PRK08703 169 YLCKVAADEWERFGNLRANVLVPGPINSPQ 198 (239)
T ss_pred HHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence 998765 1 2 6899999999998764
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.49 E-value=1e-06 Score=85.99 Aligned_cols=111 Identities=14% Similarity=0.223 Sum_probs=81.9
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ ++++.+++ .+|.|||+|+..... +.++..+++|+.|+.+++++++..
T Consensus 53 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (180)
T smart00822 53 AEVTVVACDVADR------AALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL 126 (180)
T ss_pred CeEEEEECCCCCH------HHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC
Confidence 3677889999886 55655544 369999999864321 345677899999999999999765
Q ss_pred cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-CCC
Q psy16243 323 KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-GAG 401 (782)
Q Consensus 323 ~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-~~g 401 (782)
+.+++|++||........ ....|+.+|...+.++... ..+
T Consensus 127 -~~~~ii~~ss~~~~~~~~--------------------------------------~~~~y~~sk~~~~~~~~~~~~~~ 167 (180)
T smart00822 127 -PLDFFVLFSSVAGVLGNP--------------------------------------GQANYAAANAFLDALAAHRRARG 167 (180)
T ss_pred -CcceEEEEccHHHhcCCC--------------------------------------CchhhHHHHHHHHHHHHHHHhcC
Confidence 678999999875421100 0157999999999999765 568
Q ss_pred CcEEEecCCeE
Q psy16243 402 MPVAMVRPSIV 412 (782)
Q Consensus 402 lp~~IvRp~~v 412 (782)
++++.+.||.+
T Consensus 168 ~~~~~~~~g~~ 178 (180)
T smart00822 168 LPATSINWGAW 178 (180)
T ss_pred CceEEEeeccc
Confidence 88888877754
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.3e-06 Score=91.09 Aligned_cols=143 Identities=14% Similarity=0.161 Sum_probs=85.6
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHc-cCCceEEE
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEM-KQLKSFVH 330 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~-~~~~~fV~ 330 (782)
++.++.+|++++ ++++.+++ .+|++||+|+.......+...+++|+.|+.++++.+... ..-.+.|+
T Consensus 50 ~~~~~~~Dv~d~------~~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~ 123 (275)
T PRK06940 50 DVSTQEVDVSSR------ESVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVV 123 (275)
T ss_pred eEEEEEeecCCH------HHHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEE
Confidence 678899999987 66665554 479999999976555677889999999999999987542 11235677
Q ss_pred EecceeccCCCccccccc-CCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCCCcE
Q psy16243 331 VSTAYSNCRQPIIEERFY-EPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGMPV 404 (782)
Q Consensus 331 vST~~v~~~~~~i~E~~~-~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~ 404 (782)
+||.+.........+... ....+..++.. .....+.........|+.||+..+.+.+.. ..|+.+
T Consensus 124 isS~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrv 194 (275)
T PRK06940 124 IASQSGHRLPALTAEQERALATTPTEELLS---------LPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARI 194 (275)
T ss_pred EEecccccCcccchhhhccccccccccccc---------cccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEE
Confidence 777654321100000000 00000000000 000000000011257999999988887654 358999
Q ss_pred EEecCCeEEec
Q psy16243 405 AMVRPSIVIAT 415 (782)
Q Consensus 405 ~IvRp~~v~G~ 415 (782)
..+.||.+..+
T Consensus 195 n~i~PG~v~T~ 205 (275)
T PRK06940 195 NSISPGIISTP 205 (275)
T ss_pred EEeccCcCcCc
Confidence 99999988654
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=9.7e-07 Score=91.95 Aligned_cols=115 Identities=17% Similarity=0.181 Sum_probs=81.2
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-----------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-----------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-----------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Lle 317 (782)
.++..+.+|++++ ++++.+++ .+|++||+|+.... .+.+...+++|+.|+..+.+
T Consensus 45 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 118 (243)
T PRK07023 45 ERLAEVELDLSDA------AAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTA 118 (243)
T ss_pred CeEEEEEeccCCH------HHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHH
Confidence 3688899999987 55555321 46899999987532 13345678899999777666
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+..++|++||...+... + ....|+.+|...|.+
T Consensus 119 ~~~~~~~~~~~~~iv~isS~~~~~~~---------------------------------~-----~~~~Y~~sK~a~~~~ 160 (243)
T PRK07023 119 ALAQAASDAAERRILHISSGAARNAY---------------------------------A-----GWSVYCATKAALDHH 160 (243)
T ss_pred HHHHHhhccCCCEEEEEeChhhcCCC---------------------------------C-----CchHHHHHHHHHHHH
Confidence 54432 245689999997654221 0 016799999999999
Q ss_pred HHHcC----CCCcEEEecCCeEEec
Q psy16243 395 VRRGG----AGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~~----~glp~~IvRp~~v~G~ 415 (782)
+..+. .++.+..++||.+-.+
T Consensus 161 ~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 161 ARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred HHHHHhcCCCCcEEEEecCCccccH
Confidence 98662 4788999999877543
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.4e-06 Score=90.07 Aligned_cols=114 Identities=17% Similarity=0.144 Sum_probs=77.3
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc---h----hhHHHHHHhhHHHHHHHHH----HH
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF---D----AHLKVAVSINLRATKALLE----MA 319 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f---~----~~~~~~~~~Nv~gt~~Lle----~a 319 (782)
++.++.+|++++ +++.++++ .+|++||+|+.... . +.++..+++|+.|+..+++ .+
T Consensus 58 ~~~~~~~Dl~~~------~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~ 131 (261)
T PRK08936 58 EAIAVKGDVTVE------SDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYF 131 (261)
T ss_pred eEEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 577899999987 66665554 47999999996422 1 3345678899888766554 44
Q ss_pred HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 320 KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 320 ~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+.+.-.++|++||....... +....|+.+|...+.+.+..
T Consensus 132 ~~~~~~g~iv~~sS~~~~~~~--------------------------------------~~~~~Y~~sKaa~~~~~~~la 173 (261)
T PRK08936 132 VEHDIKGNIINMSSVHEQIPW--------------------------------------PLFVHYAASKGGVKLMTETLA 173 (261)
T ss_pred HhcCCCcEEEEEccccccCCC--------------------------------------CCCcccHHHHHHHHHHHHHHH
Confidence 443223689999996432110 01157999997776665554
Q ss_pred ----CCCCcEEEecCCeEEec
Q psy16243 399 ----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G~ 415 (782)
..|+.+..++||.+-.+
T Consensus 174 ~e~~~~gi~v~~v~pg~v~t~ 194 (261)
T PRK08936 174 MEYAPKGIRVNNIGPGAINTP 194 (261)
T ss_pred HHHhhcCeEEEEEEECcCCCC
Confidence 35899999999988764
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.5e-06 Score=102.46 Aligned_cols=167 Identities=16% Similarity=0.081 Sum_probs=109.0
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+++++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 312 ~~~~~~~lv~G~s~giG~~~----a~~l~~---------------~G~~v~~~~r~~~~--~~~~~~~~~~--------- 361 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRET----ALAFAR---------------EGAEVVASDIDEAA--AERTAELIRA--------- 361 (582)
T ss_pred cCCCCEEEEECCcCHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh---------
Confidence 35678999999544444333 233322 25678888885321 1221122111
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
.-.++.++.+|++++ +++.++++ .+|++||+||.... .+..+..+++|+.|+.+++
T Consensus 362 ----~~~~~~~~~~Dv~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~ 431 (582)
T PRK05855 362 ----AGAVAHAYRVDVSDA------DAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGC 431 (582)
T ss_pred ----cCCeEEEEEcCCCCH------HHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence 012578899999998 66666655 37999999997532 1345567889999999988
Q ss_pred HHHHH----ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMAKE----MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a~~----~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+++.. .+.-.++|++||.+.+.... ....|+.||+..|
T Consensus 432 ~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~ 473 (582)
T PRK05855 432 RLFGRQMVERGTGGHIVNVASAAAYAPSR--------------------------------------SLPAYATSKAAVL 473 (582)
T ss_pred HHHHHHHHhcCCCcEEEEECChhhccCCC--------------------------------------CCcHHHHHHHHHH
Confidence 87532 21235899999987664311 0167999999888
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.... ..|+.+++++||.|-.+
T Consensus 474 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 501 (582)
T PRK05855 474 MLSECLRAELAAAGIGVTAICPGFVDTN 501 (582)
T ss_pred HHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence 877654 35899999999987643
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.9e-06 Score=91.56 Aligned_cols=115 Identities=17% Similarity=0.161 Sum_probs=80.3
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH--
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE-- 321 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~-- 321 (782)
.+.++.+|++++ ++..++++ .+|+|||+|+.... .+.++..+++|+.|+..+++.+..
T Consensus 51 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 124 (272)
T PRK07832 51 VPEHRALDISDY------DAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPM 124 (272)
T ss_pred cceEEEeeCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 355678999987 55554444 47999999986422 134567889999999999998642
Q ss_pred --ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 322 --MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 322 --~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+...++|++||....... +....|+.||...+.+....
T Consensus 125 ~~~~~~g~ii~isS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~~l~ 166 (272)
T PRK07832 125 VAAGRGGHLVNVSSAAGLVAL--------------------------------------PWHAAYSASKFGLRGLSEVLR 166 (272)
T ss_pred HhCCCCcEEEEEccccccCCC--------------------------------------CCCcchHHHHHHHHHHHHHHH
Confidence 1223689999997532110 01157999999777766543
Q ss_pred ----CCCCcEEEecCCeEEecc
Q psy16243 399 ----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G~~ 416 (782)
..++++++++||.+.++.
T Consensus 167 ~e~~~~~i~v~~v~Pg~v~t~~ 188 (272)
T PRK07832 167 FDLARHGIGVSVVVPGAVKTPL 188 (272)
T ss_pred HHhhhcCcEEEEEecCcccCcc
Confidence 358999999999998753
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.6e-06 Score=89.25 Aligned_cols=161 Identities=15% Similarity=0.148 Sum_probs=101.9
Q ss_pred CeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCcc
Q psy16243 175 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPH 254 (782)
Q Consensus 175 k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~ 254 (782)
|+++|||..+..|..+ .+.|.. .+.+|+++.|..... +.+.+
T Consensus 2 k~vlItG~sg~iG~~l----a~~l~~---------------~G~~V~~~~r~~~~~---~~~~~---------------- 43 (225)
T PRK08177 2 RTALIIGASRGLGLGL----VDRLLE---------------RGWQVTATVRGPQQD---TALQA---------------- 43 (225)
T ss_pred CEEEEeCCCchHHHHH----HHHHHh---------------CCCEEEEEeCCCcch---HHHHh----------------
Confidence 6799999655444443 233321 156788888864321 11211
Q ss_pred cccceeEEecCCCCCCCCCCHHhHHHHhc-----CceEEEEcCcccCc---------hhhHHHHHHhhHHHHHHHHHHHH
Q psy16243 255 YLSKMVAVTGDCLKPGVGINSEDRQTLVD-----NIHVVFHCAATVRF---------DAHLKVAVSINLRATKALLEMAK 320 (782)
Q Consensus 255 ~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-----~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~Lle~a~ 320 (782)
..++.+..+|++++ ++++.+.+ ++|+|||+|+.... .+.....+.+|+.|+..+++.+.
T Consensus 44 -~~~~~~~~~D~~d~------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 116 (225)
T PRK08177 44 -LPGVHIEKLDMNDP------ASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLL 116 (225)
T ss_pred -ccccceEEcCCCCH------HHHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHH
Confidence 12466778899987 66655555 47999999987532 13344577889999999988875
Q ss_pred Hcc--CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 321 EMK--QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 321 ~~~--~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
..- +...++++||.+...... + . ..+ ..|+.+|...|.+++.+
T Consensus 117 ~~~~~~~~~iv~~ss~~g~~~~~--------~----------------------~----~~~-~~Y~~sK~a~~~~~~~l 161 (225)
T PRK08177 117 GQVRPGQGVLAFMSSQLGSVELP--------D----------------------G----GEM-PLYKASKAALNSMTRSF 161 (225)
T ss_pred HhhhhcCCEEEEEccCccccccC--------C----------------------C----CCc-cchHHHHHHHHHHHHHH
Confidence 431 224678887753221100 0 0 011 46999999999999866
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..++.+..++||.+-.+
T Consensus 162 ~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 162 VAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred HHHhhcCCeEEEEEcCCceecC
Confidence 24788999999988654
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.1e-06 Score=92.43 Aligned_cols=165 Identities=19% Similarity=0.158 Sum_probs=107.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++ .
T Consensus 7 l~gk~vlItGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~--~l~~~~~~l-~---------- 54 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAEL----ARRLHA---------------RGAKLALVDLEEA--ELAALAAEL-G---------- 54 (296)
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHh-c----------
Confidence 4578999999655444433 233322 2567888877532 111111111 0
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
. ..++..+.+|++++ ++++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++++
T Consensus 55 --~-~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~ 125 (296)
T PRK05872 55 --G-DDRVLTVVADVTDL------AAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVR 125 (296)
T ss_pred --C-CCcEEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 0 13566778999987 66655543 57999999997532 13456788999999999999
Q ss_pred HHHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 318 MAKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 318 ~a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
.+... ++..++|++||...+.... ....|+.||...+.+.
T Consensus 126 ~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~~~ 167 (296)
T PRK05872 126 ATLPALIERRGYVLQVSSLAAFAAAP--------------------------------------GMAAYCASKAGVEAFA 167 (296)
T ss_pred HHHHHHHHcCCEEEEEeCHhhcCCCC--------------------------------------CchHHHHHHHHHHHHH
Confidence 87532 1235899999986543210 0157999999999988
Q ss_pred HHc-----CCCCcEEEecCCeEEec
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.. ..|+.+.++.||.+..+
T Consensus 168 ~~l~~e~~~~gi~v~~v~Pg~v~T~ 192 (296)
T PRK05872 168 NALRLEVAHHGVTVGSAYLSWIDTD 192 (296)
T ss_pred HHHHHHHHHHCcEEEEEecCcccch
Confidence 765 35888899999887653
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.3e-06 Score=86.79 Aligned_cols=115 Identities=14% Similarity=0.104 Sum_probs=80.2
Q ss_pred eeEEecCCCCCCCCCCHHhHHHHh---c--CceEEEEcCcccCc---------hhhHHHHHHhhHHHHHHHHHHHHHc--
Q psy16243 259 MVAVTGDCLKPGVGINSEDRQTLV---D--NIHVVFHCAATVRF---------DAHLKVAVSINLRATKALLEMAKEM-- 322 (782)
Q Consensus 259 v~~i~gDi~~~~lGl~~~~~~~l~---~--~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~Lle~a~~~-- 322 (782)
++++.+|+++. ++++.+. . .+|+|||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 46 ~~~~~~D~~~~------~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 119 (222)
T PRK06953 46 AEALALDVADP------ASVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVE 119 (222)
T ss_pred ceEEEecCCCH------HHHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhh
Confidence 45789999997 5665543 2 47999999987521 2345678999999999999988642
Q ss_pred cCCceEEEEeccee-ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--
Q psy16243 323 KQLKSFVHVSTAYS-NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG-- 399 (782)
Q Consensus 323 ~~~~~fV~vST~~v-~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~-- 399 (782)
.+-.++|++||... ++... . .....|+.+|...+.+++...
T Consensus 120 ~~~g~iv~isS~~~~~~~~~--------~----------------------------~~~~~Y~~sK~a~~~~~~~~~~~ 163 (222)
T PRK06953 120 AAGGVLAVLSSRMGSIGDAT--------G----------------------------TTGWLYRASKAALNDALRAASLQ 163 (222)
T ss_pred ccCCeEEEEcCccccccccc--------C----------------------------CCccccHHhHHHHHHHHHHHhhh
Confidence 12246889888643 33210 0 001369999999999988763
Q ss_pred -CCCcEEEecCCeEEec
Q psy16243 400 -AGMPVAMVRPSIVIAT 415 (782)
Q Consensus 400 -~glp~~IvRp~~v~G~ 415 (782)
.++++..++||.+..+
T Consensus 164 ~~~i~v~~v~Pg~i~t~ 180 (222)
T PRK06953 164 ARHATCIALHPGWVRTD 180 (222)
T ss_pred ccCcEEEEECCCeeecC
Confidence 3678888888877653
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.8e-06 Score=91.19 Aligned_cols=162 Identities=19% Similarity=0.150 Sum_probs=103.8
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... .++++..
T Consensus 4 ~~k~vlItGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~------~~~~l~~----------- 47 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAI----VDRFVA---------------EGARVAVLDKSAA------GLQELEA----------- 47 (262)
T ss_pred CCcEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHH------HHHHHHh-----------
Confidence 478999999655555444 233322 2567877777532 2222211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------h-----hhHHHHHHhhHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------D-----AHLKVAVSINLRATK 313 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~-----~~~~~~~~~Nv~gt~ 313 (782)
....++..+.+|++++ ++..++++ .+|++||+|+.... . +.+++.+++|+.|+.
T Consensus 48 -~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~ 120 (262)
T TIGR03325 48 -AHGDAVVGVEGDVRSL------DDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYL 120 (262)
T ss_pred -hcCCceEEEEeccCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHH
Confidence 0013678899999987 55555443 57999999986321 1 134568899999999
Q ss_pred HHHHHHHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 314 ALLEMAKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 314 ~Lle~a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
.+++++... +.-.++|++||....... .....|+.||...
T Consensus 121 ~l~~~~~~~~~~~~g~iv~~sS~~~~~~~--------------------------------------~~~~~Y~~sKaa~ 162 (262)
T TIGR03325 121 LAVKAALPALVASRGSVIFTISNAGFYPN--------------------------------------GGGPLYTAAKHAV 162 (262)
T ss_pred HHHHHHHHHHhhcCCCEEEEeccceecCC--------------------------------------CCCchhHHHHHHH
Confidence 999997642 112478888887543110 0015799999999
Q ss_pred HHHHHHc----CCCCcEEEecCCeEEec
Q psy16243 392 EDMVRRG----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 392 E~ll~~~----~~glp~~IvRp~~v~G~ 415 (782)
+.+++.. ...+.+..+.||.+..+
T Consensus 163 ~~l~~~la~e~~~~irvn~i~PG~i~t~ 190 (262)
T TIGR03325 163 VGLVKELAFELAPYVRVNGVAPGGMSSD 190 (262)
T ss_pred HHHHHHHHHhhccCeEEEEEecCCCcCC
Confidence 9998776 23477888888877644
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.43 E-value=9.6e-06 Score=85.79 Aligned_cols=221 Identities=16% Similarity=0.133 Sum_probs=146.6
Q ss_pred eeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCccc
Q psy16243 176 MVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHY 255 (782)
Q Consensus 176 ~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~ 255 (782)
.++|||.+|+.|..+ .+.|... ..+|.+++|...... .+ .
T Consensus 2 ~ilV~GatG~~G~~~----~~~L~~~---------------~~~v~~~~r~~~~~~---~~------------------~ 41 (275)
T COG0702 2 KILVTGATGFVGGAV----VRELLAR---------------GHEVRAAVRNPEAAA---AL------------------A 41 (275)
T ss_pred eEEEEecccchHHHH----HHHHHhC---------------CCEEEEEEeCHHHHH---hh------------------c
Confidence 589999555555443 2333221 678999999744211 11 0
Q ss_pred ccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecce
Q psy16243 256 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAY 335 (782)
Q Consensus 256 ~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~ 335 (782)
..+++..+|+.++ ..+...+++++.++++..... ... ........+..+..+.+. .+.++++++|...
T Consensus 42 -~~v~~~~~d~~~~------~~l~~a~~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~--~~~~~~~~~s~~~ 109 (275)
T COG0702 42 -GGVEVVLGDLRDP------KSLVAGAKGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG--AGVKHGVSLSVLG 109 (275)
T ss_pred -CCcEEEEeccCCH------hHHHHHhccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc--CCceEEEEeccCC
Confidence 3788999999998 889999999999999988665 333 222333444444444444 2578888888765
Q ss_pred eccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEec
Q psy16243 336 SNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 336 v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~ 415 (782)
+... -+..|..+|..+|.++... |++.+++|+...+..
T Consensus 110 ~~~~----------------------------------------~~~~~~~~~~~~e~~l~~s--g~~~t~lr~~~~~~~ 147 (275)
T COG0702 110 ADAA----------------------------------------SPSALARAKAAVEAALRSS--GIPYTTLRRAAFYLG 147 (275)
T ss_pred CCCC----------------------------------------CccHHHHHHHHHHHHHHhc--CCCeEEEecCeeeec
Confidence 4321 1268999999999999875 888899997766642
Q ss_pred cCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhcccc
Q psy16243 416 NKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQT 495 (782)
Q Consensus 416 ~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 495 (782)
.. .. ........+......+.+ ....+.++|++.++..+....
T Consensus 148 ~~---------------------------~~-----~~~~~~~~~~~~~~~~~~--~~~~i~~~d~a~~~~~~l~~~--- 190 (275)
T COG0702 148 AG---------------------------AA-----FIEAAEAAGLPVIPRGIG--RLSPIAVDDVAEALAAALDAP--- 190 (275)
T ss_pred cc---------------------------hh-----HHHHHHhhCCceecCCCC--ceeeeEHHHHHHHHHHHhcCC---
Confidence 11 10 011222233222222222 778999999999988877543
Q ss_pred chhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 496 WNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
...+.+|.++.+ ...+..+....+....++..
T Consensus 191 ---------------------~~~~~~~~l~g~--~~~~~~~~~~~l~~~~gr~~ 222 (275)
T COG0702 191 ---------------------ATAGRTYELAGP--EALTLAELASGLDYTIGRPV 222 (275)
T ss_pred ---------------------cccCcEEEccCC--ceecHHHHHHHHHHHhCCcc
Confidence 246789999998 88999999999998877643
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.8e-06 Score=100.62 Aligned_cols=163 Identities=17% Similarity=0.151 Sum_probs=109.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+.+|.++ .+.|... +.+|+++.|... ..+.+.+..
T Consensus 267 ~~~k~~lItGas~gIG~~~----a~~l~~~---------------G~~V~~~~r~~~---~~~~~~~~~----------- 313 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAV----ADRFAAA---------------GDRLLIIDRDAE---GAKKLAEAL----------- 313 (520)
T ss_pred cCCCEEEEECCCcHHHHHH----HHHHHHC---------------CCEEEEEeCCHH---HHHHHHHHh-----------
Confidence 4689999999765555444 3334322 567888877532 112222111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Ll 316 (782)
..++..+.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+..++
T Consensus 314 ----~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 383 (520)
T PRK06484 314 ----GDEHLSVQADITDE------AAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACA 383 (520)
T ss_pred ----CCceeEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHH
Confidence 12566789999988 66666554 37999999996421 1345578899999999999
Q ss_pred HHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 317 EMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 317 e~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+.+... .+-.++|++||.+..... + ....|+.||+..+.++
T Consensus 384 ~~~~~~~~~~g~iv~isS~~~~~~~---------------------------------~-----~~~~Y~asKaal~~l~ 425 (520)
T PRK06484 384 RAAARLMSQGGVIVNLGSIASLLAL---------------------------------P-----PRNAYCASKAAVTMLS 425 (520)
T ss_pred HHHHHHhccCCEEEEECchhhcCCC---------------------------------C-----CCchhHHHHHHHHHHH
Confidence 987643 234689999998654221 0 0167999999999888
Q ss_pred HHc-----CCCCcEEEecCCeEEec
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.. ..|+++..++||.|..+
T Consensus 426 ~~la~e~~~~gI~vn~v~PG~v~t~ 450 (520)
T PRK06484 426 RSLACEWAPAGIRVNTVAPGYIETP 450 (520)
T ss_pred HHHHHHhhhhCeEEEEEEeCCccCc
Confidence 775 34899999999988764
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.9e-06 Score=89.42 Aligned_cols=114 Identities=11% Similarity=0.097 Sum_probs=81.5
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHH--
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAK-- 320 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~-- 320 (782)
.++.++.+|++++ +++..+++ .+|++||+|+.... .+.++..+++|+.|+.++++.+.
T Consensus 48 ~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 121 (239)
T TIGR01831 48 GNARLLQFDVADR------VACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMP 121 (239)
T ss_pred CeEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3688999999997 56655544 46999999986421 23456788999999999988652
Q ss_pred --HccCCceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 321 --EMKQLKSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 321 --~~~~~~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
+..+..++|++||.... +.+. ...|+.+|+..+.+.+.
T Consensus 122 ~~~~~~~~~iv~vsS~~~~~~~~~---------------------------------------~~~Y~~sK~a~~~~~~~ 162 (239)
T TIGR01831 122 MIRARQGGRIITLASVSGVMGNRG---------------------------------------QVNYSAAKAGLIGATKA 162 (239)
T ss_pred HHhhcCCeEEEEEcchhhccCCCC---------------------------------------CcchHHHHHHHHHHHHH
Confidence 11244689999997532 2210 15799999988777765
Q ss_pred c-----CCCCcEEEecCCeEEec
Q psy16243 398 G-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G~ 415 (782)
. ..|+++..++||.+.++
T Consensus 163 la~e~~~~gi~v~~v~Pg~v~t~ 185 (239)
T TIGR01831 163 LAVELAKRKITVNCIAPGLIDTE 185 (239)
T ss_pred HHHHHhHhCeEEEEEEEccCccc
Confidence 4 35899999999988764
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.9e-06 Score=90.91 Aligned_cols=163 Identities=16% Similarity=0.142 Sum_probs=104.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... .+.+.+..
T Consensus 4 ~~~k~vlVtGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~---~~~~~~~~----------- 50 (263)
T PRK06200 4 LHGQVALITGGGSGIGRAL----VERFLA---------------EGARVAVLERSAEK---LASLRQRF----------- 50 (263)
T ss_pred CCCCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHHH---HHHHHHHh-----------
Confidence 3478999999654444333 233322 15678888775321 12221110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch--------h----hHHHHHHhhHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD--------A----HLKVAVSINLRAT 312 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~--------~----~~~~~~~~Nv~gt 312 (782)
..++.++.+|++++ ++.+.+++ .+|++||+|+..... + .++..+++|+.|+
T Consensus 51 ----~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 120 (263)
T PRK06200 51 ----GDHVLVVEGDVTSY------ADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGY 120 (263)
T ss_pred ----CCcceEEEccCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhH
Confidence 13577899999987 55655543 479999999964311 1 1445678999999
Q ss_pred HHHHHHHHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 313 KALLEMAKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 313 ~~Lle~a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
..+++.+... +.-.++|++||...+.... ....|+.||..
T Consensus 121 ~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a 162 (263)
T PRK06200 121 LLGAKAALPALKASGGSMIFTLSNSSFYPGG--------------------------------------GGPLYTASKHA 162 (263)
T ss_pred HHHHHHHHHHHHhcCCEEEEECChhhcCCCC--------------------------------------CCchhHHHHHH
Confidence 9988887542 1225799999976542210 01579999999
Q ss_pred HHHHHHHc----CCCCcEEEecCCeEEec
Q psy16243 391 AEDMVRRG----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 391 aE~ll~~~----~~glp~~IvRp~~v~G~ 415 (782)
.+.+++.. ..++.+..+.||.+..+
T Consensus 163 ~~~~~~~la~el~~~Irvn~i~PG~i~t~ 191 (263)
T PRK06200 163 VVGLVRQLAYELAPKIRVNGVAPGGTVTD 191 (263)
T ss_pred HHHHHHHHHHHHhcCcEEEEEeCCccccC
Confidence 99988776 23588888888877644
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3e-06 Score=91.79 Aligned_cols=110 Identities=20% Similarity=0.239 Sum_probs=79.1
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
.++..+.+|++++ ++...+++ .+|++||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 62 ~~~~~~~~Dv~d~------~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~ 135 (306)
T PRK07792 62 AKAVAVAGDISQR------ATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYW 135 (306)
T ss_pred CeEEEEeCCCCCH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3678899999987 66666554 57999999997542 1345678899999999999886421
Q ss_pred c---------CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 323 K---------QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 323 ~---------~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
. .-.++|++||........ ....|+.+|...+.
T Consensus 136 ~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~ 177 (306)
T PRK07792 136 RAKAKAAGGPVYGRIVNTSSEAGLVGPV--------------------------------------GQANYGAAKAGITA 177 (306)
T ss_pred HHhhcccCCCCCcEEEEECCcccccCCC--------------------------------------CCchHHHHHHHHHH
Confidence 0 124799999876432110 01579999999999
Q ss_pred HHHHc-----CCCCcEEEecCC
Q psy16243 394 MVRRG-----GAGMPVAMVRPS 410 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~ 410 (782)
+.+.. ..|+++..+.|+
T Consensus 178 l~~~la~e~~~~gI~vn~i~Pg 199 (306)
T PRK07792 178 LTLSAARALGRYGVRANAICPR 199 (306)
T ss_pred HHHHHHHHhhhcCeEEEEECCC
Confidence 98765 247888888886
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.40 E-value=5e-06 Score=87.64 Aligned_cols=170 Identities=17% Similarity=0.158 Sum_probs=105.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+. .|+..+..+.|.+. +.+|++..|.......++.++++...
T Consensus 4 l~~k~~lItGas~~--~GIG~aia~~la~~---------------G~~v~~~~~~~~~~~~~~~~~~~~~~--------- 57 (258)
T PRK07370 4 LTGKKALVTGIANN--RSIAWGIAQQLHAA---------------GAELGITYLPDEKGRFEKKVRELTEP--------- 57 (258)
T ss_pred cCCcEEEEeCCCCC--CchHHHHHHHHHHC---------------CCEEEEEecCcccchHHHHHHHHHhc---------
Confidence 35789999995321 24433334444322 55666665543211223334333210
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC-------ch----hhHHHHHHhhHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR-------FD----AHLKVAVSINLRATK 313 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~-------f~----~~~~~~~~~Nv~gt~ 313 (782)
..++.++..|++++ ++++.+++ .+|++||+|+... +. +.++..+++|+.|+.
T Consensus 58 ----~~~~~~~~~Dl~d~------~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~ 127 (258)
T PRK07370 58 ----LNPSLFLPCDVQDD------AQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLA 127 (258)
T ss_pred ----cCcceEeecCcCCH------HHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHH
Confidence 12456789999998 66665553 4799999998642 11 234567889999999
Q ss_pred HHHHHHHH-ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 314 ALLEMAKE-MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 314 ~Lle~a~~-~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+.+.+.. +..-.++|++||...... .|. ...|+.||+..+
T Consensus 128 ~l~~~~~~~m~~~g~Iv~isS~~~~~~---------------------------------~~~-----~~~Y~asKaal~ 169 (258)
T PRK07370 128 PLCKAAKPLMSEGGSIVTLTYLGGVRA---------------------------------IPN-----YNVMGVAKAALE 169 (258)
T ss_pred HHHHHHHHHHhhCCeEEEEeccccccC---------------------------------Ccc-----cchhhHHHHHHH
Confidence 98887543 222258999998653211 000 157999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+.+..+.||.+-.+
T Consensus 170 ~l~~~la~el~~~gI~Vn~i~PG~v~T~ 197 (258)
T PRK07370 170 ASVRYLAAELGPKNIRVNAISAGPIRTL 197 (258)
T ss_pred HHHHHHHHHhCcCCeEEEEEecCcccCc
Confidence 888765 35789999999888653
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.9e-06 Score=89.51 Aligned_cols=167 Identities=17% Similarity=0.163 Sum_probs=101.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|... +.+|++..|... +...+..+++..
T Consensus 6 l~~k~vlItGas~gIG~~i----a~~l~~~---------------G~~v~~~~~~~~-~~~~~~~~~~~~---------- 55 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAI----VYEFAQS---------------GVNIAFTYNSNV-EEANKIAEDLEQ---------- 55 (260)
T ss_pred cCCCEEEEeCCCchHHHHH----HHHHHHC---------------CCEEEEEcCCCH-HHHHHHHHHHHH----------
Confidence 4578999999755555444 3334322 456666555322 112222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC---------c----hhhHHHHHHhhHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR---------F----DAHLKVAVSINLRA 311 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~---------f----~~~~~~~~~~Nv~g 311 (782)
....++.++.+|++++ ++++++++ .+|++||+|+... + .+.....+++|+.+
T Consensus 56 --~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 127 (260)
T PRK08416 56 --KYGIKAKAYPLNILEP------ETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNA 127 (260)
T ss_pred --hcCCceEEEEcCCCCH------HHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHH
Confidence 0123788999999987 66665554 4799999997431 1 12344567788887
Q ss_pred HHHHHHHHHH-c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHH
Q psy16243 312 TKALLEMAKE-M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTK 388 (782)
Q Consensus 312 t~~Lle~a~~-~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK 388 (782)
...+.+.+.. + .+-.++|++||...... .|. ...|+.||
T Consensus 128 ~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------------------~~~-----~~~Y~asK 169 (260)
T PRK08416 128 FVVGAQEAAKRMEKVGGGSIISLSSTGNLVY---------------------------------IEN-----YAGHGTSK 169 (260)
T ss_pred HHHHHHHHHHhhhccCCEEEEEEeccccccC---------------------------------CCC-----cccchhhH
Confidence 6665554332 1 13468999999643211 010 15799999
Q ss_pred HHHHHHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 389 QVAEDMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 389 ~~aE~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+..+.+++.. ..|+.+..+.||.+-.
T Consensus 170 ~a~~~~~~~la~el~~~gi~v~~v~PG~i~T 200 (260)
T PRK08416 170 AAVETMVKYAATELGEKNIRVNAVSGGPIDT 200 (260)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEeeCcccC
Confidence 9999998776 2488899999987653
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.9e-06 Score=97.07 Aligned_cols=161 Identities=21% Similarity=0.216 Sum_probs=103.6
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+++++|||..+..|..+ .+.|.. .+.+|+++.|....+...+...++
T Consensus 208 ~~g~~vlItGasggIG~~l----a~~l~~---------------~Ga~vi~~~~~~~~~~l~~~~~~~------------ 256 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAI----AEVLAR---------------DGAHVVCLDVPAAGEALAAVANRV------------ 256 (450)
T ss_pred CCCCEEEEecCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCccHHHHHHHHHHc------------
Confidence 3578999999544433332 233322 156777777754332222211111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
+...+.+|++++ ++.+.+++ .+|+|||+|+.... .+.++..+++|+.|+.++.+
T Consensus 257 ------~~~~~~~Dv~~~------~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~ 324 (450)
T PRK08261 257 ------GGTALALDITAP------DAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITE 324 (450)
T ss_pred ------CCeEEEEeCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 234678899987 55555544 47999999997532 24456788999999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... ..-.+||++||.+...... ....|+.+|...+.+
T Consensus 325 ~~~~~~~~~~~g~iv~~SS~~~~~g~~--------------------------------------~~~~Y~asKaal~~~ 366 (450)
T PRK08261 325 ALLAAGALGDGGRIVGVSSISGIAGNR--------------------------------------GQTNYAASKAGVIGL 366 (450)
T ss_pred HHHHhhhhcCCCEEEEECChhhcCCCC--------------------------------------CChHHHHHHHHHHHH
Confidence 98653 1236899999976432100 015799999977777
Q ss_pred HHHc-----CCCCcEEEecCCeEE
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVI 413 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~ 413 (782)
+... ..++++..+.||.+-
T Consensus 367 ~~~la~el~~~gi~v~~v~PG~i~ 390 (450)
T PRK08261 367 VQALAPLLAERGITINAVAPGFIE 390 (450)
T ss_pred HHHHHHHHhhhCcEEEEEEeCcCc
Confidence 6655 348899999998765
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.39 E-value=1e-05 Score=84.20 Aligned_cols=166 Identities=17% Similarity=0.186 Sum_probs=109.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..++.++|||+.+.+|..+ -+.|..+ ++++.++.|.+. .++.+.+-++.
T Consensus 4 ~~~~~~lITGASsGIG~~~----A~~lA~~---------------g~~liLvaR~~~---kL~~la~~l~~--------- 52 (265)
T COG0300 4 MKGKTALITGASSGIGAEL----AKQLARR---------------GYNLILVARRED---KLEALAKELED--------- 52 (265)
T ss_pred CCCcEEEEECCCchHHHHH----HHHHHHC---------------CCEEEEEeCcHH---HHHHHHHHHHH---------
Confidence 3478999999865444333 4445433 788899999643 23333322111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
...-++.++..|++++ ++...+.+ .+|+.|++||...+. +...+.+++|+.++..|-.
T Consensus 53 --~~~v~v~vi~~DLs~~------~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~ 124 (265)
T COG0300 53 --KTGVEVEVIPADLSDP------EALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTK 124 (265)
T ss_pred --hhCceEEEEECcCCCh------hHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHH
Confidence 1123688999999998 66666554 489999999986543 3345789999999888777
Q ss_pred HHHH-c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKE-M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~-~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+... + .+--++|.++|.+.+-.. ++-..|+.||+..-.+
T Consensus 125 ~~lp~m~~~~~G~IiNI~S~ag~~p~--------------------------------------p~~avY~ATKa~v~~f 166 (265)
T COG0300 125 AVLPGMVERGAGHIINIGSAAGLIPT--------------------------------------PYMAVYSATKAFVLSF 166 (265)
T ss_pred HHHHHHHhcCCceEEEEechhhcCCC--------------------------------------cchHHHHHHHHHHHHH
Confidence 6321 1 134579999998765321 1227899999865444
Q ss_pred HH----Hc-CCCCcEEEecCCeEEe
Q psy16243 395 VR----RG-GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 395 l~----~~-~~glp~~IvRp~~v~G 414 (782)
-. +. +.|+.++.+.||.+.-
T Consensus 167 SeaL~~EL~~~gV~V~~v~PG~~~T 191 (265)
T COG0300 167 SEALREELKGTGVKVTAVCPGPTRT 191 (265)
T ss_pred HHHHHHHhcCCCeEEEEEecCcccc
Confidence 33 33 4689999999988774
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=8.2e-06 Score=86.01 Aligned_cols=166 Identities=14% Similarity=0.092 Sum_probs=104.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+. .|+..+..+.|... +.+|++..|.... .+.++++.+.
T Consensus 8 ~~~k~~lItGas~g--~GIG~a~a~~la~~---------------G~~v~l~~r~~~~---~~~~~~~~~~--------- 58 (258)
T PRK07533 8 LAGKRGLVVGIANE--QSIAWGCARAFRAL---------------GAELAVTYLNDKA---RPYVEPLAEE--------- 58 (258)
T ss_pred cCCCEEEEECCCCC--CcHHHHHHHHHHHc---------------CCEEEEEeCChhh---HHHHHHHHHh---------
Confidence 56899999994310 14533334444322 5677777775332 2222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----------hhhHHHHHHhhHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----------DAHLKVAVSINLRATK 313 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~ 313 (782)
..++.++.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+.
T Consensus 59 ----~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~ 128 (258)
T PRK07533 59 ----LDAPIFLPLDVREP------GQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFI 128 (258)
T ss_pred ----hccceEEecCcCCH------HHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHH
Confidence 11345788999988 66665543 46999999986421 1345678899999999
Q ss_pred HHHHHHHH-ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 314 ALLEMAKE-MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 314 ~Lle~a~~-~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+.+.+.. +..-.++|++||...... .+ ....|+.||+..+
T Consensus 129 ~~~~~~~p~m~~~g~Ii~iss~~~~~~---------------------------------~~-----~~~~Y~asKaal~ 170 (258)
T PRK07533 129 RMARLAEPLMTNGGSLLTMSYYGAEKV---------------------------------VE-----NYNLMGPVKAALE 170 (258)
T ss_pred HHHHHHHHHhccCCEEEEEeccccccC---------------------------------Cc-----cchhhHHHHHHHH
Confidence 99987643 222247889888643210 00 0157999999998
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
.+.+.. ..|+.+..+.||.+-.
T Consensus 171 ~l~~~la~el~~~gI~Vn~v~PG~v~T 197 (258)
T PRK07533 171 SSVRYLAAELGPKGIRVHAISPGPLKT 197 (258)
T ss_pred HHHHHHHHHhhhcCcEEEEEecCCcCC
Confidence 887765 3588899999987754
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.2e-05 Score=84.70 Aligned_cols=114 Identities=19% Similarity=0.183 Sum_probs=81.7
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++..+.+|++++ ++++++++ .+|++||+|+.... .+.+...+++|+.|+..+++.+...
T Consensus 70 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 143 (262)
T PRK07831 70 RVEAVVCDVTSE------AQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYM 143 (262)
T ss_pred eEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 678899999987 66666554 46999999996321 1345567889999999988876431
Q ss_pred --cC-CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 --KQ-LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 --~~-~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+ -.++|++||....... +....|+.||+..|.+++.+
T Consensus 144 ~~~~~~g~iv~~ss~~~~~~~--------------------------------------~~~~~Y~~sKaal~~~~~~la 185 (262)
T PRK07831 144 RARGHGGVIVNNASVLGWRAQ--------------------------------------HGQAHYAAAKAGVMALTRCSA 185 (262)
T ss_pred HhcCCCcEEEEeCchhhcCCC--------------------------------------CCCcchHHHHHHHHHHHHHHH
Confidence 11 3578888876432110 01157999999999998766
Q ss_pred ----CCCCcEEEecCCeEEec
Q psy16243 399 ----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G~ 415 (782)
..|+.+.+++||.+..+
T Consensus 186 ~e~~~~gI~v~~i~Pg~~~t~ 206 (262)
T PRK07831 186 LEAAEYGVRINAVAPSIAMHP 206 (262)
T ss_pred HHhCccCeEEEEEeeCCccCc
Confidence 25899999999988754
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=6.4e-06 Score=85.34 Aligned_cols=157 Identities=14% Similarity=0.194 Sum_probs=100.0
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.|+++|||..+..|..+ .+.|.. ++.+|+++.|.... ..+.+++
T Consensus 2 ~k~vlItGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~--------------- 45 (236)
T PRK06483 2 PAPILITGAGQRIGLAL----AWHLLA---------------QGQPVIVSYRTHYP--AIDGLRQ--------------- 45 (236)
T ss_pred CceEEEECCCChHHHHH----HHHHHH---------------CCCeEEEEeCCchh--HHHHHHH---------------
Confidence 57899999654444333 233322 25677887775421 1111111
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
.++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+..+.+.+
T Consensus 46 ---~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~ 116 (236)
T PRK06483 46 ---AGAQCIQADFSTN------AGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLAL 116 (236)
T ss_pred ---cCCEEEEcCCCCH------HHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHH
Confidence 1356789999987 55544433 47999999986321 2345678899999998877765
Q ss_pred HHc---cC--CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 320 KEM---KQ--LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 320 ~~~---~~--~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
... .+ ..++|++||....... + ....|+.||...|.+
T Consensus 117 ~~~~~~~~~~~g~iv~~ss~~~~~~~---------------------------------~-----~~~~Y~asKaal~~l 158 (236)
T PRK06483 117 EDLLRGHGHAASDIIHITDYVVEKGS---------------------------------D-----KHIAYAASKAALDNM 158 (236)
T ss_pred HHHHHhCCCCCceEEEEcchhhccCC---------------------------------C-----CCccHHHHHHHHHHH
Confidence 432 11 3579999886432110 0 116799999999999
Q ss_pred HHHc----CCCCcEEEecCCeEE
Q psy16243 395 VRRG----GAGMPVAMVRPSIVI 413 (782)
Q Consensus 395 l~~~----~~glp~~IvRp~~v~ 413 (782)
++.+ ..++.+..++||.+.
T Consensus 159 ~~~~a~e~~~~irvn~v~Pg~~~ 181 (236)
T PRK06483 159 TLSFAAKLAPEVKVNSIAPALIL 181 (236)
T ss_pred HHHHHHHHCCCcEEEEEccCcee
Confidence 8876 346888899999774
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=8.7e-06 Score=86.70 Aligned_cols=165 Identities=18% Similarity=0.153 Sum_probs=102.9
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||.... .|+..+.-+.|... +.+|++..|... ..++++++.+. .
T Consensus 4 ~~k~~lItGas~~--~GIG~aiA~~la~~---------------G~~Vil~~r~~~---~~~~~~~~~~~---------~ 54 (274)
T PRK08415 4 KGKKGLIVGVANN--KSIAYGIAKACFEQ---------------GAELAFTYLNEA---LKKRVEPIAQE---------L 54 (274)
T ss_pred CCcEEEEECCCCC--CCHHHHHHHHHHHC---------------CCEEEEEecCHH---HHHHHHHHHHh---------c
Confidence 4789999994311 24433333444322 556777666422 22333333210 0
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC-------c----hhhHHHHHHhhHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR-------F----DAHLKVAVSINLRATKA 314 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~-------f----~~~~~~~~~~Nv~gt~~ 314 (782)
+ .+ ..+.+|++++ ++++.+++ .+|++||+|+... + .+.++..+++|+.|+..
T Consensus 55 ~---~~-~~~~~Dv~d~------~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~ 124 (274)
T PRK08415 55 G---SD-YVYELDVSKP------EHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIE 124 (274)
T ss_pred C---Cc-eEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHH
Confidence 1 12 5688999998 66655543 4699999999642 1 13355688999999999
Q ss_pred HHHHHHH-ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 315 LLEMAKE-MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 315 Lle~a~~-~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+.+.. +..-.++|++||.+..... | ....|+.||+..+.
T Consensus 125 l~~~~~p~m~~~g~Iv~isS~~~~~~~---------------------------------~-----~~~~Y~asKaal~~ 166 (274)
T PRK08415 125 LTRALLPLLNDGASVLTLSYLGGVKYV---------------------------------P-----HYNVMGVAKAALES 166 (274)
T ss_pred HHHHHHHHhccCCcEEEEecCCCccCC---------------------------------C-----cchhhhhHHHHHHH
Confidence 8887553 2222589999986532110 0 01579999999888
Q ss_pred HHHHc-----CCCCcEEEecCCeEEe
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+.+.. ..|+.+..+.||.|..
T Consensus 167 l~~~la~el~~~gIrVn~v~PG~v~T 192 (274)
T PRK08415 167 SVRYLAVDLGKKGIRVNAISAGPIKT 192 (274)
T ss_pred HHHHHHHHhhhcCeEEEEEecCcccc
Confidence 88765 3478888888887764
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.1e-05 Score=84.73 Aligned_cols=114 Identities=18% Similarity=0.170 Sum_probs=80.2
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHH-H
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAK-E 321 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~-~ 321 (782)
.++..+.+|++++ +++..+++ .+|++||+|+..... +.++..+++|+.|...+...+. .
T Consensus 68 ~~~~~~~~D~~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 141 (256)
T PRK12859 68 VKVSSMELDLTQN------DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARG 141 (256)
T ss_pred CeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3688899999987 66665554 369999999875321 2345678899999888865432 2
Q ss_pred c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 322 M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 322 ~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
+ .+-.++|++||....... + ....|+.||+..+.+.+..
T Consensus 142 ~~~~~~g~iv~isS~~~~~~~---------------------------------~-----~~~~Y~~sK~a~~~l~~~la 183 (256)
T PRK12859 142 FDKKSGGRIINMTSGQFQGPM---------------------------------V-----GELAYAATKGAIDALTSSLA 183 (256)
T ss_pred HhhcCCeEEEEEcccccCCCC---------------------------------C-----CchHHHHHHHHHHHHHHHHH
Confidence 2 124589999997643210 0 1168999999999998765
Q ss_pred ----CCCCcEEEecCCeEEe
Q psy16243 399 ----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G 414 (782)
..++.+..++||.+-.
T Consensus 184 ~~~~~~~i~v~~v~PG~i~t 203 (256)
T PRK12859 184 AEVAHLGITVNAINPGPTDT 203 (256)
T ss_pred HHhhhhCeEEEEEEEccccC
Confidence 2478889999987654
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.5e-06 Score=87.72 Aligned_cols=118 Identities=15% Similarity=0.149 Sum_probs=75.7
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHh-------cCceEEEEcCcccCc------h------------hhHHHHHHhhHHHH
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLV-------DNIHVVFHCAATVRF------D------------AHLKVAVSINLRAT 312 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~-------~~vdiViH~Aa~v~f------~------------~~~~~~~~~Nv~gt 312 (782)
++.++.+|++++.-- .+.+++++ ..+|+|||+||.... . ..+.+.+++|+.|+
T Consensus 53 ~~~~~~~Dv~d~~~~--~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~ 130 (267)
T TIGR02685 53 SAVTCQADLSNSATL--FSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAP 130 (267)
T ss_pred ceEEEEccCCCchhh--HHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHH
Confidence 566789999997210 00122222 358999999986321 1 12456789999999
Q ss_pred HHHHHHHHHcc---------CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCcc
Q psy16243 313 KALLEMAKEMK---------QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNT 383 (782)
Q Consensus 313 ~~Lle~a~~~~---------~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~ 383 (782)
..+++.+...- .-..++++||...... . +....
T Consensus 131 ~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~---------------------------------~-----~~~~~ 172 (267)
T TIGR02685 131 YFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQP---------------------------------L-----LGFTM 172 (267)
T ss_pred HHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCC---------------------------------C-----cccch
Confidence 99988754321 1124666665432110 0 11168
Q ss_pred HHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 384 YALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 384 Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
|+.||+..|.+++.. ..|+.+..++||.+..+
T Consensus 173 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~ 209 (267)
T TIGR02685 173 YTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP 209 (267)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence 999999999998876 24899999999987543
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=6.6e-06 Score=86.85 Aligned_cols=168 Identities=15% Similarity=0.177 Sum_probs=103.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++.+ .
T Consensus 6 l~~k~~lItGas~giG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~---------~ 55 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLAT----VELLLE---------------AGASVAICGRDEER--LASAEARLRE---------K 55 (265)
T ss_pred cCCCEEEEeCCCchHHHHH----HHHHHH---------------CCCeEEEEeCCHHH--HHHHHHHHHh---------h
Confidence 4579999999644444332 233322 25678888885321 1111222111 0
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
.+ ..++..+.+|++++ ++++++++ .+|++||+|+.... .+.+...+++|+.|+..+++
T Consensus 56 ~~--~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 127 (265)
T PRK07062 56 FP--GARLLAARCDVLDE------ADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTR 127 (265)
T ss_pred CC--CceEEEEEecCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 01 13678899999987 66655443 46999999986432 12455678889888777766
Q ss_pred HHHH-c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKE-M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~-~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+.. + .+..++|++||....... + ....|+.+|...+.+
T Consensus 128 ~~~~~~~~~~~g~iv~isS~~~~~~~---------------------------------~-----~~~~y~asKaal~~~ 169 (265)
T PRK07062 128 AFLPLLRASAAASIVCVNSLLALQPE---------------------------------P-----HMVATSAARAGLLNL 169 (265)
T ss_pred HHHHHHhccCCcEEEEeccccccCCC---------------------------------C-----CchHhHHHHHHHHHH
Confidence 5432 1 134689999998653221 0 014689999887777
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..++||.+..+
T Consensus 170 ~~~la~e~~~~gi~v~~i~PG~v~t~ 195 (265)
T PRK07062 170 VKSLATELAPKGVRVNSILLGLVESG 195 (265)
T ss_pred HHHHHHHhhhcCeEEEEEecCccccc
Confidence 6544 35899999999988653
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.2e-05 Score=84.34 Aligned_cols=165 Identities=18% Similarity=0.125 Sum_probs=105.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+. .|+..+.-+.|... +.+|++..|.. ...+.++++.
T Consensus 5 l~~k~~lItGas~~--~gIG~a~a~~la~~---------------G~~Vi~~~r~~---~~~~~~~~~~----------- 53 (252)
T PRK06079 5 LSGKKIVVMGVANK--RSIAWGCAQAIKDQ---------------GATVIYTYQND---RMKKSLQKLV----------- 53 (252)
T ss_pred cCCCEEEEeCCCCC--CchHHHHHHHHHHC---------------CCEEEEecCch---HHHHHHHhhc-----------
Confidence 34789999995310 14433334455322 56777776642 1222232221
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----------hhhHHHHHHhhHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----------DAHLKVAVSINLRATK 313 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~ 313 (782)
..++.++.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+.
T Consensus 54 ----~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~ 123 (252)
T PRK06079 54 ----DEEDLLVECDVASD------ESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLI 123 (252)
T ss_pred ----cCceeEEeCCCCCH------HHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHH
Confidence 12577899999987 66665443 47999999986421 1335567889999999
Q ss_pred HHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 314 ALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 314 ~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+.+.+... .+-.++|++||....... | ....|+.||+.-+
T Consensus 124 ~l~~~~~~~~~~~g~Iv~iss~~~~~~~---------------------------------~-----~~~~Y~asKaal~ 165 (252)
T PRK06079 124 AVAKYARPLLNPGASIVTLTYFGSERAI---------------------------------P-----NYNVMGIAKAALE 165 (252)
T ss_pred HHHHHHHHhcccCceEEEEeccCccccC---------------------------------C-----cchhhHHHHHHHH
Confidence 888876532 223578999886532110 0 0157999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+.+..+.||.|-.+
T Consensus 166 ~l~~~la~el~~~gI~vn~i~PG~v~T~ 193 (252)
T PRK06079 166 SSVRYLARDLGKKGIRVNAISAGAVKTL 193 (252)
T ss_pred HHHHHHHHHhhhcCcEEEEEecCccccc
Confidence 988765 35899999999888643
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.3e-05 Score=85.17 Aligned_cols=166 Identities=13% Similarity=0.097 Sum_probs=104.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||.... .|+..+.-+.|.+. +.+|++..|.. ...++++++.+.
T Consensus 8 ~~~k~~lItGas~~--~GIG~aia~~la~~---------------G~~V~l~~r~~---~~~~~~~~l~~~--------- 58 (272)
T PRK08159 8 MAGKRGLILGVANN--RSIAWGIAKACRAA---------------GAELAFTYQGD---ALKKRVEPLAAE--------- 58 (272)
T ss_pred ccCCEEEEECCCCC--CcHHHHHHHHHHHC---------------CCEEEEEcCch---HHHHHHHHHHHh---------
Confidence 34789999994311 24433334444322 56777665532 123344433211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----------hhhHHHHHHhhHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----------DAHLKVAVSINLRATK 313 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~ 313 (782)
......+.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+.
T Consensus 59 ----~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~ 128 (272)
T PRK08159 59 ----LGAFVAGHCDVTDE------ASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFT 128 (272)
T ss_pred ----cCCceEEecCCCCH------HHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHH
Confidence 01245688999987 66665543 47999999986431 1345678899999999
Q ss_pred HHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 314 ALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 314 ~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+++.+... .+-.++|++||...... .|. ...|+.||+..+
T Consensus 129 ~l~~~~~~~~~~~g~Iv~iss~~~~~~---------------------------------~p~-----~~~Y~asKaal~ 170 (272)
T PRK08159 129 AVAQRAEKLMTDGGSILTLTYYGAEKV---------------------------------MPH-----YNVMGVAKAALE 170 (272)
T ss_pred HHHHHHHHhcCCCceEEEEeccccccC---------------------------------CCc-----chhhhhHHHHHH
Confidence 999886542 22358899988543210 010 157999999988
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
.+.+.. ..|+.+..+.||.+..
T Consensus 171 ~l~~~la~el~~~gIrVn~v~PG~v~T 197 (272)
T PRK08159 171 ASVKYLAVDLGPKNIRVNAISAGPIKT 197 (272)
T ss_pred HHHHHHHHHhcccCeEEEEeecCCcCC
Confidence 888765 3578888888887754
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.30 E-value=8e-06 Score=88.97 Aligned_cols=169 Identities=17% Similarity=0.220 Sum_probs=103.8
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
++.++|||..+..|..+ .+.|.. .+.+|++..|... ..++..+++.. ..+
T Consensus 53 g~~~lITGAs~GIG~al----A~~La~---------------~G~~Vil~~R~~~--~l~~~~~~l~~---------~~~ 102 (320)
T PLN02780 53 GSWALVTGPTDGIGKGF----AFQLAR---------------KGLNLVLVARNPD--KLKDVSDSIQS---------KYS 102 (320)
T ss_pred CCEEEEeCCCcHHHHHH----HHHHHH---------------CCCCEEEEECCHH--HHHHHHHHHHH---------HCC
Confidence 78999999655444333 233322 2567888888642 12222222211 001
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHH---HHhcC--ceEEEEcCcccC-----ch----hhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQ---TLVDN--IHVVFHCAATVR-----FD----AHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~---~l~~~--vdiViH~Aa~v~-----f~----~~~~~~~~~Nv~gt~~Lle~a 319 (782)
..++..+..|+++. + .+.++ +.+.+ +|++||+||... +. +..+..+++|+.|+..+.+.+
T Consensus 103 --~~~~~~~~~Dl~~~---~-~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 176 (320)
T PLN02780 103 --KTQIKTVVVDFSGD---I-DEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAV 176 (320)
T ss_pred --CcEEEEEEEECCCC---c-HHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHH
Confidence 12567788898852 1 13333 33333 569999998642 11 234568899999999998886
Q ss_pred HHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 320 KEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 320 ~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
... .+..++|++||...+..+. .| ....|+.||+..+.+.+
T Consensus 177 lp~m~~~~~g~IV~iSS~a~~~~~~-------------------------------~p-----~~~~Y~aSKaal~~~~~ 220 (320)
T PLN02780 177 LPGMLKRKKGAIINIGSGAAIVIPS-------------------------------DP-----LYAVYAATKAYIDQFSR 220 (320)
T ss_pred HHHHHhcCCcEEEEEechhhccCCC-------------------------------Cc-----cchHHHHHHHHHHHHHH
Confidence 431 2457899999986532100 00 11689999999998887
Q ss_pred Hc-----CCCCcEEEecCCeEEe
Q psy16243 397 RG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G 414 (782)
.. ..|+.+..+.||.|-.
T Consensus 221 ~L~~El~~~gI~V~~v~PG~v~T 243 (320)
T PLN02780 221 CLYVEYKKSGIDVQCQVPLYVAT 243 (320)
T ss_pred HHHHHHhccCeEEEEEeeCceec
Confidence 65 3589999999998764
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=4e-06 Score=87.66 Aligned_cols=160 Identities=16% Similarity=0.144 Sum_probs=100.7
Q ss_pred CeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCcc
Q psy16243 175 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPH 254 (782)
Q Consensus 175 k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~ 254 (782)
|.++|||.++..|..+ .+.|.. .+.+|+++.|... +.+.++.+ .
T Consensus 2 k~vlItGasggiG~~i----a~~l~~---------------~g~~V~~~~r~~~-----~~~~~~~~------------~ 45 (251)
T PRK06924 2 RYVIITGTSQGLGEAI----ANQLLE---------------KGTHVISISRTEN-----KELTKLAE------------Q 45 (251)
T ss_pred cEEEEecCCchHHHHH----HHHHHh---------------cCCEEEEEeCCch-----HHHHHHHh------------c
Confidence 6799999655544444 233322 1457888877532 12222211 0
Q ss_pred cccceeEEecCCCCCCCCCCHHhHHHHhcCc-----------eEEEEcCcccCc--------hhhHHHHHHhhHHHHHHH
Q psy16243 255 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNI-----------HVVFHCAATVRF--------DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 255 ~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~v-----------diViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~L 315 (782)
...+++++.+|++++ ++++.+++++ .+++|+|+.... .+.+...+++|+.|+..+
T Consensus 46 ~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 119 (251)
T PRK06924 46 YNSNLTFHSLDLQDV------HELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMIL 119 (251)
T ss_pred cCCceEEEEecCCCH------HHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHH
Confidence 123688899999987 6776666532 178999986432 133456788899997766
Q ss_pred HHHHH----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 316 LEMAK----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 316 le~a~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
++.+. +.+...++|++||..+.... + ....|+.+|...
T Consensus 120 ~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------------------------~-----~~~~Y~~sKaa~ 161 (251)
T PRK06924 120 TSTFMKHTKDWKVDKRVINISSGAAKNPY---------------------------------F-----GWSAYCSSKAGL 161 (251)
T ss_pred HHHHHHHHhccCCCceEEEecchhhcCCC---------------------------------C-----CcHHHhHHHHHH
Confidence 66543 22234689999997643110 0 016799999999
Q ss_pred HHHHHHcC-------CCCcEEEecCCeEEe
Q psy16243 392 EDMVRRGG-------AGMPVAMVRPSIVIA 414 (782)
Q Consensus 392 E~ll~~~~-------~glp~~IvRp~~v~G 414 (782)
|.+++... .++.+..++||.+-.
T Consensus 162 ~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t 191 (251)
T PRK06924 162 DMFTQTVATEQEEEEYPVKIVAFSPGVMDT 191 (251)
T ss_pred HHHHHHHHHHhhhcCCCeEEEEecCCcccc
Confidence 99987551 368888889987764
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=98.29 E-value=8.6e-06 Score=85.65 Aligned_cols=113 Identities=14% Similarity=0.134 Sum_probs=78.5
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCc-----------eEEEEcCcccC-----c-----hhhHHHHHHhhHHHHHHHH
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNI-----------HVVFHCAATVR-----F-----DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~v-----------diViH~Aa~v~-----f-----~~~~~~~~~~Nv~gt~~Ll 316 (782)
++.++.+|++++ ++++.+++.+ |++||+|+... + .+.++..+++|+.|+..+.
T Consensus 56 ~v~~~~~Dl~~~------~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~ 129 (256)
T TIGR01500 56 RVVRVSLDLGAE------AGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLT 129 (256)
T ss_pred eEEEEEeccCCH------HHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHH
Confidence 688899999987 6666555422 58999998632 1 1344578899999988887
Q ss_pred HHHHHc----cC-CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 317 EMAKEM----KQ-LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 317 e~a~~~----~~-~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
+.+... ++ -.++|++||....... | ....|+.||...
T Consensus 130 ~~~~~~l~~~~~~~~~iv~isS~~~~~~~---------------------------------~-----~~~~Y~asKaal 171 (256)
T TIGR01500 130 SSVLKAFKDSPGLNRTVVNISSLCAIQPF---------------------------------K-----GWALYCAGKAAR 171 (256)
T ss_pred HHHHHHHhhcCCCCCEEEEECCHHhCCCC---------------------------------C-----CchHHHHHHHHH
Confidence 765432 11 3579999997543210 0 015799999999
Q ss_pred HHHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 392 EDMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 392 E~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+.+.+.. ..++.+..+.||.+-.
T Consensus 172 ~~l~~~la~e~~~~~i~v~~v~PG~v~T 199 (256)
T TIGR01500 172 DMLFQVLALEEKNPNVRVLNYAPGVLDT 199 (256)
T ss_pred HHHHHHHHHHhcCCCeEEEEecCCcccc
Confidence 9988765 3478888888887754
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.1e-05 Score=83.17 Aligned_cols=113 Identities=15% Similarity=0.126 Sum_probs=77.9
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc------------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF------------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f------------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|...+.+.
T Consensus 57 ~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 130 (262)
T PRK07984 57 SDIVLPCDVAED------ASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKA 130 (262)
T ss_pred CceEeecCCCCH------HHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHH
Confidence 456788999987 67766553 36999999986421 123446678999998888887
Q ss_pred HHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 319 AKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 319 a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
+..+ .+-.++|++||.+.... .| ....|+.||...+.+.+.
T Consensus 131 ~~~~~~~~g~Iv~iss~~~~~~---------------------------------~~-----~~~~Y~asKaal~~l~~~ 172 (262)
T PRK07984 131 CRSMLNPGSALLTLSYLGAERA---------------------------------IP-----NYNVMGLAKASLEANVRY 172 (262)
T ss_pred HHHHhcCCcEEEEEecCCCCCC---------------------------------CC-----CcchhHHHHHHHHHHHHH
Confidence 6533 11257889988653211 01 115799999999998876
Q ss_pred c-----CCCCcEEEecCCeEEe
Q psy16243 398 G-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G 414 (782)
. ..|+.+..+.||.+..
T Consensus 173 la~el~~~gIrVn~i~PG~v~T 194 (262)
T PRK07984 173 MANAMGPEGVRVNAISAGPIRT 194 (262)
T ss_pred HHHHhcccCcEEeeeecCcccc
Confidence 6 3478888888887753
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=2e-05 Score=82.97 Aligned_cols=168 Identities=18% Similarity=0.126 Sum_probs=104.0
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||.... .|+..+.-+.|.+. +.+|++..|..... ++++++.+. .
T Consensus 6 ~~k~~lItGa~~s--~GIG~aia~~la~~---------------G~~v~~~~r~~~~~---~~~~~~~~~---------~ 56 (257)
T PRK08594 6 EGKTYVVMGVANK--RSIAWGIARSLHNA---------------GAKLVFTYAGERLE---KEVRELADT---------L 56 (257)
T ss_pred CCCEEEEECCCCC--CCHHHHHHHHHHHC---------------CCEEEEecCcccch---HHHHHHHHH---------c
Confidence 4789999994310 24433334445322 56777776643222 223222110 0
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------h---hhHHHHHHhhHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------D---AHLKVAVSINLRATKA 314 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~---~~~~~~~~~Nv~gt~~ 314 (782)
. ..++..+..|++++ ++.+.+++ .+|++||+|+.... + +.+...+++|+.++..
T Consensus 57 ~--~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 128 (257)
T PRK08594 57 E--GQESLLLPCDVTSD------EEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTA 128 (257)
T ss_pred C--CCceEEEecCCCCH------HHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHH
Confidence 0 13678899999988 66655543 47999999986421 1 2234567899999888
Q ss_pred HHHHHHH-ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 315 LLEMAKE-MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 315 Lle~a~~-~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+++.+.. +..-.++|++||...... .| ....|+.||+..+.
T Consensus 129 ~~~~~~~~~~~~g~Iv~isS~~~~~~---------------------------------~~-----~~~~Y~asKaal~~ 170 (257)
T PRK08594 129 VAREAKKLMTEGGSIVTLTYLGGERV---------------------------------VQ-----NYNVMGVAKASLEA 170 (257)
T ss_pred HHHHHHHhcccCceEEEEcccCCccC---------------------------------CC-----CCchhHHHHHHHHH
Confidence 8777553 222257999998754211 00 01579999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+.+..+.||.+..+
T Consensus 171 l~~~la~el~~~gIrvn~v~PG~v~T~ 197 (257)
T PRK08594 171 SVKYLANDLGKDGIRVNAISAGPIRTL 197 (257)
T ss_pred HHHHHHHHhhhcCCEEeeeecCcccCH
Confidence 88765 34899999999877643
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.8e-05 Score=79.80 Aligned_cols=108 Identities=21% Similarity=0.327 Sum_probs=74.8
Q ss_pred EecCCCCCCCCCCHHhHHHHhc---CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH-ccCCceEEE
Q psy16243 262 VTGDCLKPGVGINSEDRQTLVD---NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE-MKQLKSFVH 330 (782)
Q Consensus 262 i~gDi~~~~lGl~~~~~~~l~~---~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~-~~~~~~fV~ 330 (782)
+.+|++++ ++++.+++ ++|++||+|+...+ .+.+.+.+++|+.|+.++++++.. +.+..++++
T Consensus 36 ~~~D~~~~------~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~ 109 (199)
T PRK07578 36 VQVDITDP------ASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTL 109 (199)
T ss_pred eEecCCCh------HHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 46788877 66666655 57999999986432 133556788999999999998754 223357899
Q ss_pred EecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----CCCCcEEE
Q psy16243 331 VSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG----GAGMPVAM 406 (782)
Q Consensus 331 vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~----~~glp~~I 406 (782)
+||.+..... | ....|+.||...+.+.+.. ..|+.+..
T Consensus 110 iss~~~~~~~---------------------------------~-----~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~ 151 (199)
T PRK07578 110 TSGILSDEPI---------------------------------P-----GGASAATVNGALEGFVKAAALELPRGIRINV 151 (199)
T ss_pred EcccccCCCC---------------------------------C-----CchHHHHHHHHHHHHHHHHHHHccCCeEEEE
Confidence 8886532110 0 0157999999988887765 34777777
Q ss_pred ecCCeEE
Q psy16243 407 VRPSIVI 413 (782)
Q Consensus 407 vRp~~v~ 413 (782)
++||.+-
T Consensus 152 i~Pg~v~ 158 (199)
T PRK07578 152 VSPTVLT 158 (199)
T ss_pred EcCCccc
Confidence 7877654
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.7e-05 Score=84.28 Aligned_cols=112 Identities=15% Similarity=0.135 Sum_probs=78.2
Q ss_pred eEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----------hhhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 260 VAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----------DAHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 260 ~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
..+.+|++++ ++.+.+++ .+|++||+|+.... .+.++..+++|+.|+.++++.+..
T Consensus 60 ~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~ 133 (271)
T PRK06505 60 FVLPCDVEDI------ASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAK 133 (271)
T ss_pred eEEeCCCCCH------HHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 4688999987 66665543 47999999996421 133456788999999998877542
Q ss_pred -ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 322 -MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 322 -~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
+.+-.++|++||.+.... .|. ...|+.||+..+.+.+..
T Consensus 134 ~m~~~G~Iv~isS~~~~~~---------------------------------~~~-----~~~Y~asKaAl~~l~r~la~ 175 (271)
T PRK06505 134 LMPDGGSMLTLTYGGSTRV---------------------------------MPN-----YNVMGVAKAALEASVRYLAA 175 (271)
T ss_pred hhccCceEEEEcCCCcccc---------------------------------CCc-----cchhhhhHHHHHHHHHHHHH
Confidence 222257999998753211 010 157999999998888765
Q ss_pred ---CCCCcEEEecCCeEEec
Q psy16243 399 ---GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ---~~glp~~IvRp~~v~G~ 415 (782)
..|+.+..+.||.+-.+
T Consensus 176 el~~~gIrVn~v~PG~i~T~ 195 (271)
T PRK06505 176 DYGPQGIRVNAISAGPVRTL 195 (271)
T ss_pred HHhhcCeEEEEEecCCcccc
Confidence 35899999999887653
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.7e-05 Score=88.58 Aligned_cols=57 Identities=7% Similarity=0.060 Sum_probs=45.6
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc----hhhHHHHHHhhHHHHHHHHHHHH
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF----DAHLKVAVSINLRATKALLEMAK 320 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~Lle~a~ 320 (782)
++..+.+|++++ +++.+.+.++|++||+||.... .+..++.+++|+.|+.++++++.
T Consensus 225 ~v~~v~~Dvsd~------~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~l 285 (406)
T PRK07424 225 PVKTLHWQVGQE------AALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFF 285 (406)
T ss_pred CeEEEEeeCCCH------HHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788999987 7788888899999999986422 13456789999999999999864
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.5e-05 Score=81.33 Aligned_cols=111 Identities=18% Similarity=0.149 Sum_probs=77.9
Q ss_pred eEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc------------hhhHHHHHHhhHHHHHHHHHHHH
Q psy16243 260 VAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF------------DAHLKVAVSINLRATKALLEMAK 320 (782)
Q Consensus 260 ~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f------------~~~~~~~~~~Nv~gt~~Lle~a~ 320 (782)
..+.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+..+.+++.
T Consensus 59 ~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~l 132 (260)
T PRK06997 59 LVFPCDVASD------EQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAAL 132 (260)
T ss_pred ceeeccCCCH------HHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4678999988 66666554 47999999986421 12345678899999999888765
Q ss_pred H-ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 321 E-MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 321 ~-~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
. +.+-.++|++||...... .| ....|+.||+..+.+.+..
T Consensus 133 p~m~~~g~Ii~iss~~~~~~---------------------------------~~-----~~~~Y~asKaal~~l~~~la 174 (260)
T PRK06997 133 PMLSDDASLLTLSYLGAERV---------------------------------VP-----NYNTMGLAKASLEASVRYLA 174 (260)
T ss_pred HhcCCCceEEEEeccccccC---------------------------------CC-----CcchHHHHHHHHHHHHHHHH
Confidence 3 222357999998653211 00 0157999999998888765
Q ss_pred ----CCCCcEEEecCCeEEe
Q psy16243 399 ----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G 414 (782)
..|+.+..+.||.+-.
T Consensus 175 ~el~~~gIrVn~i~PG~v~T 194 (260)
T PRK06997 175 VSLGPKGIRANGISAGPIKT 194 (260)
T ss_pred HHhcccCeEEEEEeeCcccc
Confidence 3478888888887754
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.3e-05 Score=85.92 Aligned_cols=109 Identities=18% Similarity=0.233 Sum_probs=77.3
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
++.++.+|++++ ++...+++ .+|++||+|+.... .+.++..+++|+.|+..+++++...
T Consensus 65 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 138 (286)
T PRK07791 65 EAVANGDDIADW------DGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYW 138 (286)
T ss_pred ceEEEeCCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 577889999987 66555443 57999999987431 1345678999999998888776421
Q ss_pred ---c--C---CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 323 ---K--Q---LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 323 ---~--~---~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
. + -.++|++||....... +. ...|+.||...+.+
T Consensus 139 ~~~~~~~~~~~g~Iv~isS~~~~~~~---------------------------------~~-----~~~Y~asKaal~~l 180 (286)
T PRK07791 139 RAESKAGRAVDARIINTSSGAGLQGS---------------------------------VG-----QGNYSAAKAGIAAL 180 (286)
T ss_pred HHhcccCCCCCcEEEEeCchhhCcCC---------------------------------CC-----chhhHHHHHHHHHH
Confidence 0 0 2479999997543210 00 15799999999988
Q ss_pred HHHc-----CCCCcEEEecCC
Q psy16243 395 VRRG-----GAGMPVAMVRPS 410 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~ 410 (782)
.+.. ..|+.+..+.|+
T Consensus 181 ~~~la~el~~~gIrVn~v~Pg 201 (286)
T PRK07791 181 TLVAAAELGRYGVTVNAIAPA 201 (286)
T ss_pred HHHHHHHHHHhCeEEEEECCC
Confidence 8765 358999999997
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.20 E-value=2e-05 Score=85.67 Aligned_cols=194 Identities=15% Similarity=0.092 Sum_probs=104.0
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeeccc-ceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAH-LKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~-~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
.+|+++|||..+..|..+ .+.|... + .+|++..|... ...+..+++ +
T Consensus 2 ~~k~vlITGas~GIG~ai----a~~L~~~---------------G~~~V~l~~r~~~--~~~~~~~~l-~---------- 49 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYA----AKALAAT---------------GEWHVIMACRDFL--KAEQAAKSL-G---------- 49 (314)
T ss_pred CCCEEEEECCCChHHHHH----HHHHHHc---------------CCCEEEEEeCCHH--HHHHHHHHh-c----------
Confidence 368999999654444333 3344321 4 67777777532 122222221 1
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh-------cCceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV-------DNIHVVFHCAATVRF--------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~-------~~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Ll 316 (782)
....++..+.+|++++ ++++.++ ..+|++||+||.... .+.++..+++|+.|+..++
T Consensus 50 --~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~ 121 (314)
T TIGR01289 50 --MPKDSYTIMHLDLGSL------DSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLC 121 (314)
T ss_pred --CCCCeEEEEEcCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHH
Confidence 0113677889999987 5555444 347999999996421 1345567899999988886
Q ss_pred HHHH----Hcc-CCceEEEEecceeccCC--CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHH
Q psy16243 317 EMAK----EMK-QLKSFVHVSTAYSNCRQ--PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQ 389 (782)
Q Consensus 317 e~a~----~~~-~~~~fV~vST~~v~~~~--~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~ 389 (782)
+.+. +.+ +..++|++||...+... ..++ ++.+..++.......... . .............|+.||+
T Consensus 122 ~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~Y~~SK~ 194 (314)
T TIGR01289 122 NLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVP-----PKANLGDLSGLAAGFKAP-I-AMIDGKEFKGAKAYKDSKV 194 (314)
T ss_pred HHHHHHHHhCCCCCCeEEEEecCccccccCCCcCC-----CcccccccccccccCCCc-c-cccCCCCcchhhhHHHhHH
Confidence 6643 221 13699999998765321 0010 000000000000000000 0 0000000011157999999
Q ss_pred HHHHHHHHc----C--CCCcEEEecCCeEE
Q psy16243 390 VAEDMVRRG----G--AGMPVAMVRPSIVI 413 (782)
Q Consensus 390 ~aE~ll~~~----~--~glp~~IvRp~~v~ 413 (782)
+...+.... . .|+.++.++||.|.
T Consensus 195 a~~~~~~~la~~~~~~~gi~v~~v~PG~v~ 224 (314)
T TIGR01289 195 CNMLTVRELHRRFHDETGITFASLYPGCIA 224 (314)
T ss_pred HHHHHHHHHHHHhccCCCeEEEEecCCccc
Confidence 976655444 1 37888899999884
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.8e-05 Score=82.09 Aligned_cols=112 Identities=15% Similarity=0.140 Sum_probs=77.2
Q ss_pred eeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------h----hhHHHHHHhhHHHHHHHHHHH
Q psy16243 259 MVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------D----AHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 259 v~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~----~~~~~~~~~Nv~gt~~Lle~a 319 (782)
...+.+|++++ ++.+.+++ .+|++||+||.... . +.++..+++|+.|+..+.+.+
T Consensus 58 ~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~ 131 (261)
T PRK08690 58 ELVFRCDVASD------DEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAA 131 (261)
T ss_pred ceEEECCCCCH------HHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHH
Confidence 35688999988 77766653 47999999997531 1 123456788999988887764
Q ss_pred HHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 320 KEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 320 ~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
... ++-.++|++||....... |. ...|+.||...+.+.+.
T Consensus 132 ~p~m~~~~g~Iv~iss~~~~~~~---------------------------------~~-----~~~Y~asKaal~~l~~~ 173 (261)
T PRK08690 132 RPMMRGRNSAIVALSYLGAVRAI---------------------------------PN-----YNVMGMAKASLEAGIRF 173 (261)
T ss_pred HHHhhhcCcEEEEEcccccccCC---------------------------------CC-----cccchhHHHHHHHHHHH
Confidence 431 122578999887543110 11 15799999999988765
Q ss_pred c-----CCCCcEEEecCCeEEe
Q psy16243 398 G-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G 414 (782)
. ..|+.+..+.||.+-.
T Consensus 174 la~e~~~~gIrVn~i~PG~v~T 195 (261)
T PRK08690 174 TAACLGKEGIRCNGISAGPIKT 195 (261)
T ss_pred HHHHhhhcCeEEEEEecCcccc
Confidence 4 3589999999988764
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=98.19 E-value=8.5e-06 Score=79.42 Aligned_cols=148 Identities=17% Similarity=0.201 Sum_probs=99.0
Q ss_pred CeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCcc
Q psy16243 175 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPH 254 (782)
Q Consensus 175 k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~ 254 (782)
|+++|||..+..|..+ .+.|... ...+|++..|..+.....+...++. .
T Consensus 1 k~~lItGa~~giG~~~----a~~l~~~--------------g~~~v~~~~r~~~~~~~~~l~~~l~-------------~ 49 (167)
T PF00106_consen 1 KTVLITGASSGIGRAL----ARALARR--------------GARVVILTSRSEDSEGAQELIQELK-------------A 49 (167)
T ss_dssp EEEEEETTTSHHHHHH----HHHHHHT--------------TTEEEEEEESSCHHHHHHHHHHHHH-------------H
T ss_pred CEEEEECCCCHHHHHH----HHHHHhc--------------CceEEEEeeeccccccccccccccc-------------c
Confidence 6899999754444333 2333221 2456777777622222222222221 1
Q ss_pred cccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHH
Q psy16243 255 YLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAK 320 (782)
Q Consensus 255 ~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~ 320 (782)
...++.++++|++++ ++.+.+++ .+|++||+|+.... .+.++..+++|+.+...+.+++.
T Consensus 50 ~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 123 (167)
T PF00106_consen 50 PGAKITFIECDLSDP------ESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALL 123 (167)
T ss_dssp TTSEEEEEESETTSH------HHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ccccccccccccccc------ccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhe
Confidence 125899999999987 77766655 46999999998652 24455789999999999999988
Q ss_pred HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 321 EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 321 ~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
. .+-.++|++||....-.. | ....|+.||+..+.+.+..
T Consensus 124 ~-~~~g~iv~~sS~~~~~~~---------------------------------~-----~~~~Y~askaal~~~~~~l 162 (167)
T PF00106_consen 124 P-QGGGKIVNISSIAGVRGS---------------------------------P-----GMSAYSASKAALRGLTQSL 162 (167)
T ss_dssp H-HTTEEEEEEEEGGGTSSS---------------------------------T-----TBHHHHHHHHHHHHHHHHH
T ss_pred e-ccccceEEecchhhccCC---------------------------------C-----CChhHHHHHHHHHHHHHHH
Confidence 7 467899999998654221 1 1157999999999988765
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.7e-05 Score=92.36 Aligned_cols=162 Identities=19% Similarity=0.149 Sum_probs=106.5
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|.++ .+.|... +.+|+++.|... ...+..+++
T Consensus 4 ~~k~~lITGas~gIG~ai----a~~l~~~---------------G~~V~~~~r~~~--~~~~~~~~~------------- 49 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAA----CQRFARA---------------GDQVVVADRNVE--RARERADSL------------- 49 (520)
T ss_pred CCeEEEEECCCcHHHHHH----HHHHHHC---------------CCEEEEEeCCHH--HHHHHHHHh-------------
Confidence 478999999755444443 3344322 567887777532 111111111
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC-----c----hhhHHHHHHhhHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR-----F----DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv~gt~~Ll 316 (782)
..++.++.+|++++ ++++++++ .+|++||+|+... + .+.++..+++|+.|+..++
T Consensus 50 ---~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 120 (520)
T PRK06484 50 ---GPDHHALAMDVSDE------AQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVA 120 (520)
T ss_pred ---CCceeEEEeccCCH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHH
Confidence 12567889999988 66666554 4799999998631 1 1345678899999999998
Q ss_pred HHHHHc---cCC-ceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMAKEM---KQL-KSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a~~~---~~~-~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+++... .+- .++|++||........ ....|+.||+..+
T Consensus 121 ~~~~~~~~~~~~g~~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~ 162 (520)
T PRK06484 121 REALRLMIEQGHGAAIVNVASGAGLVALP--------------------------------------KRTAYSASKAAVI 162 (520)
T ss_pred HHHHHHHHhcCCCCeEEEECCcccCCCCC--------------------------------------CCchHHHHHHHHH
Confidence 886543 122 3899999976432210 0167999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..++.+..++||.+-.+
T Consensus 163 ~l~~~la~e~~~~~i~v~~i~Pg~v~t~ 190 (520)
T PRK06484 163 SLTRSLACEWAAKGIRVNAVLPGYVRTQ 190 (520)
T ss_pred HHHHHHHHHhhhhCeEEEEEccCCcCch
Confidence 988765 34789999999987543
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=4.8e-05 Score=80.25 Aligned_cols=111 Identities=16% Similarity=0.162 Sum_probs=77.4
Q ss_pred eEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC-------c----hhhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 260 VAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR-------F----DAHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 260 ~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~-------f----~~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
..+.+|++++ ++.+++++ .+|++||+|+... + .+.+...+++|+.|+..+++.+..
T Consensus 61 ~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 134 (260)
T PRK06603 61 FVSELDVTNP------KSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEA 134 (260)
T ss_pred eEEEccCCCH------HHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3578999998 66665553 4799999998632 1 134556889999999998887542
Q ss_pred -ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 322 -MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 322 -~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
+..-.++|++||...... .|. ...|+.||+..+.+.+..
T Consensus 135 ~m~~~G~Iv~isS~~~~~~---------------------------------~~~-----~~~Y~asKaal~~l~~~la~ 176 (260)
T PRK06603 135 LMHDGGSIVTLTYYGAEKV---------------------------------IPN-----YNVMGVAKAALEASVKYLAN 176 (260)
T ss_pred hhccCceEEEEecCccccC---------------------------------CCc-----ccchhhHHHHHHHHHHHHHH
Confidence 222258999998653211 010 157999999999888765
Q ss_pred ---CCCCcEEEecCCeEEe
Q psy16243 399 ---GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 ---~~glp~~IvRp~~v~G 414 (782)
..|+.+..+.||.+-.
T Consensus 177 el~~~gIrVn~v~PG~v~T 195 (260)
T PRK06603 177 DMGENNIRVNAISAGPIKT 195 (260)
T ss_pred HhhhcCeEEEEEecCcCcc
Confidence 3578889999987754
|
|
| >KOG4039|consensus | Back alignment and domain information |
|---|
Probab=98.12 E-value=9.2e-06 Score=77.31 Aligned_cols=163 Identities=21% Similarity=0.113 Sum_probs=116.4
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
..+..+|-|++|..|.|| ++.+.+ .+.-.+||++.|.+- ++
T Consensus 17 q~~s~fvlGAtG~~G~~l----lk~~~E-------------~~~FSKV~~i~RR~~----------------~d------ 57 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGL----LKHAQE-------------APQFSKVYAILRREL----------------PD------ 57 (238)
T ss_pred hccceEEEeccccccHHH----HHHHHh-------------cccceeEEEEEeccC----------------CC------
Confidence 356789999877777776 333322 234578999998531 11
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
|..-.++.....|...- +++..-.++.|+.|-|-|+++-....+.++++.-.-...++++|++. +++.|+.+|
T Consensus 58 ~at~k~v~q~~vDf~Kl------~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~-Gck~fvLvS 130 (238)
T KOG4039|consen 58 PATDKVVAQVEVDFSKL------SQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEK-GCKTFVLVS 130 (238)
T ss_pred ccccceeeeEEechHHH------HHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhC-CCeEEEEEe
Confidence 22334677777887665 67777778899999998887655445556666666678888899885 999999999
Q ss_pred cceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeE
Q psy16243 333 TAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIV 412 (782)
Q Consensus 333 T~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v 412 (782)
|+.+..... ..|-.+|-..|+-+.+..-. .++|+|||.+
T Consensus 131 S~GAd~sSr----------------------------------------FlY~k~KGEvE~~v~eL~F~-~~~i~RPG~l 169 (238)
T KOG4039|consen 131 SAGADPSSR----------------------------------------FLYMKMKGEVERDVIELDFK-HIIILRPGPL 169 (238)
T ss_pred ccCCCcccc----------------------------------------eeeeeccchhhhhhhhcccc-EEEEecCcce
Confidence 987643311 57888888888888766211 4699999999
Q ss_pred EeccCCCCcc
Q psy16243 413 IATNKEPIPG 422 (782)
Q Consensus 413 ~G~~~~p~~g 422 (782)
.|...+..+|
T Consensus 170 l~~R~esr~g 179 (238)
T KOG4039|consen 170 LGERTESRQG 179 (238)
T ss_pred eccccccccc
Confidence 9988776665
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.6e-06 Score=91.23 Aligned_cols=112 Identities=21% Similarity=0.263 Sum_probs=82.6
Q ss_pred ccchhhHHHHHHHHHhcCCCCeEEEeCCCccccc-ccccccccccccccCcccCCCeeEeeccccCCCCCCChhhHHhhh
Q psy16243 121 NTYALTKQVAEDMVRRGGAGMPVAMVRPSIDLGI-LFYSEQFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLV 199 (782)
Q Consensus 121 nt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~~~~-~~~~~~~f~~l~~~~p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~ 199 (782)
-|+++|.+++.+|+++.+ ...+|+||.+....+ +.+.. .++........|.+++.++.||...+++||+...++.|.
T Consensus 8 ATGFLG~yLl~eLL~~~~-~kv~cLVRA~s~E~a~~RL~~-~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La 85 (382)
T COG3320 8 ATGFLGAYLLLELLDRSD-AKVICLVRAQSDEAALARLEK-TFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELA 85 (382)
T ss_pred CchHhHHHHHHHHHhcCC-CcEEEEEecCCHHHHHHHHHH-HhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHHHh
Confidence 379999999999999855 678899998875433 11111 111122223467899999999999999999999999999
Q ss_pred ccceeEEeeceeeeecccceeeeeecccchhhHHH
Q psy16243 200 DNIHVVFHCAATVRFDAHLKVAVSINLRATKALLE 234 (782)
Q Consensus 200 ~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~e 234 (782)
+++|.|+|+||.|++-.++.-.--.+..++.++.+
T Consensus 86 ~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlr 120 (382)
T COG3320 86 ENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLR 120 (382)
T ss_pred hhcceEEecchhhcccCcHHHhcCcchHhHHHHHH
Confidence 99999999999998766655444444445554443
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.2e-05 Score=79.66 Aligned_cols=107 Identities=11% Similarity=0.137 Sum_probs=76.7
Q ss_pred eeEEecCCCCCCCCCCHHhHHHHhc----CceEEEEcCccc---------Cc---hhhHHHHHHhhHHHHHHHHHHHHH-
Q psy16243 259 MVAVTGDCLKPGVGINSEDRQTLVD----NIHVVFHCAATV---------RF---DAHLKVAVSINLRATKALLEMAKE- 321 (782)
Q Consensus 259 v~~i~gDi~~~~lGl~~~~~~~l~~----~vdiViH~Aa~v---------~f---~~~~~~~~~~Nv~gt~~Lle~a~~- 321 (782)
+..+.+|++++ ++++.+++ .+|++||+|+.. .+ .+.++..+++|+.|+..+++++..
T Consensus 46 ~~~~~~D~~~~------~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 119 (223)
T PRK05884 46 VDAIVCDNTDP------ASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDH 119 (223)
T ss_pred CcEEecCCCCH------HHHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788999987 66666654 579999999741 11 234567889999999999998654
Q ss_pred ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---
Q psy16243 322 MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--- 398 (782)
Q Consensus 322 ~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--- 398 (782)
+..-.++|++||.. . + ....|+.||+.-+.+.+..
T Consensus 120 ~~~~g~Iv~isS~~---~----------~-----------------------------~~~~Y~asKaal~~~~~~la~e 157 (223)
T PRK05884 120 LRSGGSIISVVPEN---P----------P-----------------------------AGSAEAAIKAALSNWTAGQAAV 157 (223)
T ss_pred hhcCCeEEEEecCC---C----------C-----------------------------CccccHHHHHHHHHHHHHHHHH
Confidence 22225799998854 0 0 0157999999999888765
Q ss_pred --CCCCcEEEecCCeEE
Q psy16243 399 --GAGMPVAMVRPSIVI 413 (782)
Q Consensus 399 --~~glp~~IvRp~~v~ 413 (782)
..|+.+..+.||.+.
T Consensus 158 ~~~~gI~v~~v~PG~v~ 174 (223)
T PRK05884 158 FGTRGITINAVACGRSV 174 (223)
T ss_pred hhhcCeEEEEEecCccC
Confidence 247888888887764
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.9e-05 Score=80.77 Aligned_cols=113 Identities=20% Similarity=0.155 Sum_probs=75.3
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC-----ch----hhHHHHHHhhHHHHHHHHHHH--
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR-----FD----AHLKVAVSINLRATKALLEMA-- 319 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~-----f~----~~~~~~~~~Nv~gt~~Lle~a-- 319 (782)
++.++.+|++++ ++++++++ .+|++||+|+... +. +.+.+.+.+|+.++..+...+
T Consensus 49 ~~~~~~~Dv~d~------~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~ 122 (259)
T PRK08340 49 EVYAVKADLSDK------DDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQ 122 (259)
T ss_pred CceEEEcCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHH
Confidence 577899999987 66666553 5799999999642 11 223345677888766555442
Q ss_pred --HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 320 --KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 320 --~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
.+..+-.++|++||..+.... | ....|+.||...+.+.+.
T Consensus 123 ~~~~~~~~g~iv~isS~~~~~~~---------------------------------~-----~~~~y~~sKaa~~~~~~~ 164 (259)
T PRK08340 123 AWLEKKMKGVLVYLSSVSVKEPM---------------------------------P-----PLVLADVTRAGLVQLAKG 164 (259)
T ss_pred HHHhcCCCCEEEEEeCcccCCCC---------------------------------C-----CchHHHHHHHHHHHHHHH
Confidence 211234689999998653210 0 015799999999988876
Q ss_pred c-----CCCCcEEEecCCeEEe
Q psy16243 398 G-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G 414 (782)
. ..|+.+..+.||.+-.
T Consensus 165 la~e~~~~gI~v~~v~pG~v~t 186 (259)
T PRK08340 165 VSRTYGGKGIRAYTVLLGSFDT 186 (259)
T ss_pred HHHHhCCCCEEEEEeccCcccC
Confidence 5 3478888888876654
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=5e-05 Score=79.91 Aligned_cols=167 Identities=17% Similarity=0.144 Sum_probs=105.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+...++..
T Consensus 5 ~~~k~vlItG~~~giG~~i----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~l~~---------- 53 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAA----AEAFAA---------------EGCHLHLVARDAD--ALEALAADLRA---------- 53 (259)
T ss_pred CCCCEEEEeCCCchHHHHH----HHHHHH---------------cCCEEEEEeCCHH--HHHHHHHHHHh----------
Confidence 3478999999644444333 233322 1457888877532 12222222111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc---CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD---NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~---~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
....++..+.+|++++ +++..+++ .+|++||+|+.... .+.++..+++|+.|...+++.+..
T Consensus 54 --~~~~~~~~~~~D~~~~------~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 125 (259)
T PRK06125 54 --AHGVDVAVHALDLSSP------EAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYP 125 (259)
T ss_pred --hcCCceEEEEecCCCH------HHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 0113678899999987 66666554 47999999986431 134556789999999988887532
Q ss_pred -c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 322 -M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 322 -~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
+ .+-.++|++||....... + ....|+.+|...+.+.+..
T Consensus 126 ~~~~~~~g~iv~iss~~~~~~~---------------------------------~-----~~~~y~ask~al~~~~~~l 167 (259)
T PRK06125 126 RMKARGSGVIVNVIGAAGENPD---------------------------------A-----DYICGSAGNAALMAFTRAL 167 (259)
T ss_pred HHHHcCCcEEEEecCccccCCC---------------------------------C-----CchHhHHHHHHHHHHHHHH
Confidence 1 123578988886431100 0 0146899999988887765
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..|+++..+.||.+..+
T Consensus 168 a~e~~~~gi~v~~i~PG~v~t~ 189 (259)
T PRK06125 168 GGKSLDDGVRVVGVNPGPVATD 189 (259)
T ss_pred HHHhCccCeEEEEEecCccccH
Confidence 34899999999887654
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=7.6e-05 Score=78.58 Aligned_cols=113 Identities=18% Similarity=0.147 Sum_probs=76.3
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC-------ch----hhHHHHHHhhHHHHHHHHHHH
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR-------FD----AHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~-------f~----~~~~~~~~~Nv~gt~~Lle~a 319 (782)
++.++.+|++++ ++.+.+++ .+|++||+|+... +. +.+...+++|+.|+..+.+.+
T Consensus 58 ~~~~~~~Dv~~~------~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~ 131 (256)
T PRK07889 58 PAPVLELDVTNE------EHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKAL 131 (256)
T ss_pred CCcEEeCCCCCH------HHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 567889999987 66655543 4799999998642 11 233456889999998888775
Q ss_pred HH-ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 320 KE-MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 320 ~~-~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
.. +..-.++|++|+....+. | ....|+.||+..+.+.+..
T Consensus 132 ~~~m~~~g~Iv~is~~~~~~~----------------------------------~-----~~~~Y~asKaal~~l~~~l 172 (256)
T PRK07889 132 LPLMNEGGSIVGLDFDATVAW----------------------------------P-----AYDWMGVAKAALESTNRYL 172 (256)
T ss_pred HHhcccCceEEEEeecccccC----------------------------------C-----ccchhHHHHHHHHHHHHHH
Confidence 43 222246888775321100 0 0146899999998887765
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..|+.+..+.||.+-.+
T Consensus 173 a~el~~~gIrvn~v~PG~v~T~ 194 (256)
T PRK07889 173 ARDLGPRGIRVNLVAAGPIRTL 194 (256)
T ss_pred HHHhhhcCeEEEeeccCcccCh
Confidence 35788888999887654
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00013 Score=75.40 Aligned_cols=117 Identities=12% Similarity=0.193 Sum_probs=76.8
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHH---hcCceEEEEcCcccCch-------------hhHHHHHHhhHHHHHHHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTL---VDNIHVVFHCAATVRFD-------------AHLKVAVSINLRATKALLEMAK 320 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l---~~~vdiViH~Aa~v~f~-------------~~~~~~~~~Nv~gt~~Lle~a~ 320 (782)
.++.++.+|++++ ++++++ +.++|+|||+|+..... +.+...+.+|+.|+..+.+.+.
T Consensus 43 ~~~~~~~~Dls~~------~~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~ 116 (235)
T PRK09009 43 DNVQWHALDVTDE------AEIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFT 116 (235)
T ss_pred CceEEEEecCCCH------HHHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3678899999987 454443 44689999999975321 2234578899999988888764
Q ss_pred H-c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 321 E-M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 321 ~-~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
. + .+..+++++||... . +.+.. .+. + ..|+.+|+..+.+.+.
T Consensus 117 ~~~~~~~~~~i~~iss~~~--~---~~~~~-------------------------~~~----~-~~Y~asK~a~~~~~~~ 161 (235)
T PRK09009 117 PKLKQSESAKFAVISAKVG--S---ISDNR-------------------------LGG----W-YSYRASKAALNMFLKT 161 (235)
T ss_pred hhccccCCceEEEEeeccc--c---cccCC-------------------------CCC----c-chhhhhHHHHHHHHHH
Confidence 3 2 13457888887431 1 00000 000 1 4799999999998876
Q ss_pred cC-------CCCcEEEecCCeEEe
Q psy16243 398 GG-------AGMPVAMVRPSIVIA 414 (782)
Q Consensus 398 ~~-------~glp~~IvRp~~v~G 414 (782)
.. .++.+..+.||.+..
T Consensus 162 la~e~~~~~~~i~v~~v~PG~v~t 185 (235)
T PRK09009 162 LSIEWQRSLKHGVVLALHPGTTDT 185 (235)
T ss_pred HHHHhhcccCCeEEEEEcccceec
Confidence 52 367777777777654
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00025 Score=74.04 Aligned_cols=111 Identities=17% Similarity=0.153 Sum_probs=78.7
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH----H
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM----A 319 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~----a 319 (782)
++....+|++++ +++.++.+ +||++|++||.+.. ++.++..+++|+.|.....++ +
T Consensus 87 ~~~~y~cdis~~------eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M 160 (300)
T KOG1201|consen 87 EAKAYTCDISDR------EEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKM 160 (300)
T ss_pred ceeEEEecCCCH------HHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHH
Confidence 678899999998 66665554 46999999998643 244567889999997766554 4
Q ss_pred HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 320 KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 320 ~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+. +-.++|-++|+...... ++ --.|+.||.++....+..
T Consensus 161 ~~~-~~GHIV~IaS~aG~~g~---------------------------------~g-----l~~YcaSK~a~vGfhesL~ 201 (300)
T KOG1201|consen 161 LEN-NNGHIVTIASVAGLFGP---------------------------------AG-----LADYCASKFAAVGFHESLS 201 (300)
T ss_pred Hhc-CCceEEEehhhhcccCC---------------------------------cc-----chhhhhhHHHHHHHHHHHH
Confidence 443 55789999887643221 01 157999999987665443
Q ss_pred -------CCCCcEEEecCCeEE
Q psy16243 399 -------GAGMPVAMVRPSIVI 413 (782)
Q Consensus 399 -------~~glp~~IvRp~~v~ 413 (782)
..|+.++.+.|+.+-
T Consensus 202 ~EL~~~~~~~IktTlv~P~~i~ 223 (300)
T KOG1201|consen 202 MELRALGKDGIKTTLVCPYFIN 223 (300)
T ss_pred HHHHhcCCCCeeEEEEeeeecc
Confidence 347888888887765
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00015 Score=75.91 Aligned_cols=56 Identities=18% Similarity=0.193 Sum_probs=44.4
Q ss_pred eEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc----hhhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 260 VAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF----DAHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 260 ~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
..+.+|+++. +++.+.+..+|++||+||.... .+.+++.+++|+.|+.++++.+..
T Consensus 61 ~~~~~D~~~~------~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 61 EWIKWECGKE------ESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred eEEEeeCCCH------HHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4678899887 6777788889999999986432 245667889999999999998654
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.1e-05 Score=81.97 Aligned_cols=135 Identities=16% Similarity=0.149 Sum_probs=87.3
Q ss_pred EEecCCCCCCCCCCHHhHHHHhc----CceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHc-cCCceEEEEecce
Q psy16243 261 AVTGDCLKPGVGINSEDRQTLVD----NIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEM-KQLKSFVHVSTAY 335 (782)
Q Consensus 261 ~i~gDi~~~~lGl~~~~~~~l~~----~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~-~~~~~fV~vST~~ 335 (782)
++.+|+++. ++++.+++ ++|++||+|+... ..+++..+++|+.|+..+++++... ..-.++|++||..
T Consensus 27 ~~~~Dl~~~------~~v~~~~~~~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~ 99 (241)
T PRK12428 27 FIQADLGDP------ASIDAAVAALPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLA 99 (241)
T ss_pred hhcccCCCH------HHHHHHHHHhcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHH
Confidence 467898887 67776665 4799999999754 3567788999999999999997643 2236899999998
Q ss_pred eccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc------CCCCcEEEe
Q psy16243 336 SNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG------GAGMPVAMV 407 (782)
Q Consensus 336 v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~------~~glp~~Iv 407 (782)
.++... +..|...... ..+ +... .....+.+....|+.||...+.+.+.. ..|+.+.++
T Consensus 100 ~~~~~~~~~~~~~~~~~~-----------~~~-~~~~-~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v 166 (241)
T PRK12428 100 GAEWPQRLELHKALAATA-----------SFD-EGAA-WLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCV 166 (241)
T ss_pred hhccccchHHHHhhhccc-----------hHH-HHHH-hhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEe
Confidence 775321 1111100000 000 0000 000001112268999999998876543 248999999
Q ss_pred cCCeEEec
Q psy16243 408 RPSIVIAT 415 (782)
Q Consensus 408 Rp~~v~G~ 415 (782)
+||.+.++
T Consensus 167 ~PG~v~T~ 174 (241)
T PRK12428 167 APGPVFTP 174 (241)
T ss_pred ecCCccCc
Confidence 99998765
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00011 Score=73.06 Aligned_cols=156 Identities=15% Similarity=0.182 Sum_probs=97.5
Q ss_pred eeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecc-cchhhHHHHHHHhhcccccccccccCcc
Q psy16243 176 MVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINL-RATKALLEMAKEMKQLKFFDPMRKRCPH 254 (782)
Q Consensus 176 ~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~-~~~~~~~erl~~~~~~~~f~~l~~~~~~ 254 (782)
+++|||..|. +.....+.|... ...+++++.|. .......+.++++...
T Consensus 2 tylitGG~gg----lg~~la~~La~~--------------~~~~~il~~r~~~~~~~~~~~i~~l~~~------------ 51 (181)
T PF08659_consen 2 TYLITGGLGG----LGQSLARWLAER--------------GARRLILLGRSGAPSAEAEAAIRELESA------------ 51 (181)
T ss_dssp EEEEETTTSH----HHHHHHHHHHHT--------------T-SEEEEEESSGGGSTTHHHHHHHHHHT------------
T ss_pred EEEEECCccH----HHHHHHHHHHHc--------------CCCEEEEeccCCCccHHHHHHHHHHHhC------------
Confidence 5799993322 323334555433 24678889998 3333444455544321
Q ss_pred cccceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHH
Q psy16243 255 YLSKMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAK 320 (782)
Q Consensus 255 ~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~ 320 (782)
-.+|.++.+|++++ +++.++++. ++.|||+|+.... .+.....+..-+.|+.+|.++..
T Consensus 52 -g~~v~~~~~Dv~d~------~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~ 124 (181)
T PF08659_consen 52 -GARVEYVQCDVTDP------EAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALE 124 (181)
T ss_dssp -T-EEEEEE--TTSH------HHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCceeeeccCccCH------HHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhh
Confidence 24899999999998 788887754 5789999987532 13345677889999999999988
Q ss_pred HccCCceEEEEeccee-ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 321 EMKQLKSFVHVSTAYS-NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 321 ~~~~~~~fV~vST~~v-~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.. .+..||..||.+. .|..+ ...|+..-...+.+....
T Consensus 125 ~~-~l~~~i~~SSis~~~G~~g---------------------------------------q~~YaaAN~~lda~a~~~~ 164 (181)
T PF08659_consen 125 NR-PLDFFILFSSISSLLGGPG---------------------------------------QSAYAAANAFLDALARQRR 164 (181)
T ss_dssp TT-TTSEEEEEEEHHHHTT-TT---------------------------------------BHHHHHHHHHHHHHHHHHH
T ss_pred cC-CCCeEEEECChhHhccCcc---------------------------------------hHhHHHHHHHHHHHHHHHH
Confidence 74 8999999999854 45432 056888877777777655
Q ss_pred CCCCcEEEec
Q psy16243 399 GAGMPVAMVR 408 (782)
Q Consensus 399 ~~glp~~IvR 408 (782)
..|.|+..+.
T Consensus 165 ~~g~~~~sI~ 174 (181)
T PF08659_consen 165 SRGLPAVSIN 174 (181)
T ss_dssp HTTSEEEEEE
T ss_pred hCCCCEEEEE
Confidence 4578765544
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00016 Score=78.23 Aligned_cols=116 Identities=13% Similarity=0.148 Sum_probs=75.7
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcC-ccc-------Cc-h---hhHHHHHHhhHHHHHHHHHH
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCA-ATV-------RF-D---AHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~A-a~v-------~f-~---~~~~~~~~~Nv~gt~~Lle~ 318 (782)
++.++.+|++++ ++.+.+++ .+|++||+| +.. .+ + +...+.+++|+.|+..+..+
T Consensus 68 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 141 (305)
T PRK08303 68 RGIAVQVDHLVP------EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHF 141 (305)
T ss_pred ceEEEEcCCCCH------HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHH
Confidence 567899999987 66665554 479999999 531 11 1 22345678899998888777
Q ss_pred HHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+... .+-.++|++||........ + .+ ....|+.||...+.+.
T Consensus 142 ~lp~m~~~~~g~IV~isS~~~~~~~~--------~----------------------~~-----~~~~Y~asKaal~~lt 186 (305)
T PRK08303 142 ALPLLIRRPGGLVVEITDGTAEYNAT--------H----------------------YR-----LSVFYDLAKTSVNRLA 186 (305)
T ss_pred HHHHhhhCCCcEEEEECCccccccCc--------C----------------------CC-----CcchhHHHHHHHHHHH
Confidence 5431 1235899999854311100 0 00 0146999999998887
Q ss_pred HHc-----CCCCcEEEecCCeEEe
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G 414 (782)
+.. ..|+.+..+.||.+-.
T Consensus 187 ~~La~el~~~gIrVn~v~PG~v~T 210 (305)
T PRK08303 187 FSLAHELAPHGATAVALTPGWLRS 210 (305)
T ss_pred HHHHHHhhhcCcEEEEecCCcccc
Confidence 654 3478888888887653
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00028 Score=72.91 Aligned_cols=162 Identities=13% Similarity=0.051 Sum_probs=97.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||.....|..+ .+.|... +.+|++..|..+ ...+..+++..
T Consensus 3 ~~~k~~lVtGas~GIG~ai----a~~la~~---------------G~~V~~~~r~~~--~l~~~~~~i~~---------- 51 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTI----SCHFARL---------------GATLILCDQDQS--ALKDTYEQCSA---------- 51 (227)
T ss_pred CCCeEEEEECCccHHHHHH----HHHHHHC---------------CCEEEEEcCCHH--HHHHHHHHHHh----------
Confidence 3478999999654333322 3344322 567777777532 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh-------c-CceEEEEcCcccC----ch----hhHHHHHHhhHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV-------D-NIHVVFHCAATVR----FD----AHLKVAVSINLRATKAL 315 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~-------~-~vdiViH~Aa~v~----f~----~~~~~~~~~Nv~gt~~L 315 (782)
...++..+..|++++ ++++.++ . .+|++||+|+... +. +.+.+.+.+|+.++..+
T Consensus 52 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (227)
T PRK08862 52 ---LTDNVYSFQLKDFSQ------ESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTY 122 (227)
T ss_pred ---cCCCeEEEEccCCCH------HHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHH
Confidence 012567788899887 6665543 3 5899999997432 11 23344667788887776
Q ss_pred HHHHH----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 316 LEMAK----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 316 le~a~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
+..+. +.++-..+|++||..... ....|+.||+.-
T Consensus 123 ~~~~~~~m~~~~~~g~Iv~isS~~~~~-----------------------------------------~~~~Y~asKaal 161 (227)
T PRK08862 123 GQVAAERMRKRNKKGVIVNVISHDDHQ-----------------------------------------DLTGVESSNALV 161 (227)
T ss_pred HHHHHHHHHhcCCCceEEEEecCCCCC-----------------------------------------CcchhHHHHHHH
Confidence 65532 221235899999853210 014699999998
Q ss_pred HHHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 392 EDMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 392 E~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+.+.+.. ..++.+..+.||.+-.
T Consensus 162 ~~~~~~la~el~~~~Irvn~v~PG~i~t 189 (227)
T PRK08862 162 SGFTHSWAKELTPFNIRVGGVVPSIFSA 189 (227)
T ss_pred HHHHHHHHHHHhhcCcEEEEEecCcCcC
Confidence 8887665 3478888888887654
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00022 Score=74.50 Aligned_cols=113 Identities=16% Similarity=0.187 Sum_probs=73.8
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHh-------cCceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHH----
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLV-------DNIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMA---- 319 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~-------~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a---- 319 (782)
++.++.+|++++ ++++.++ ..+|++||+|+..... +...+...+|+.+...++..+
T Consensus 50 ~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m 123 (246)
T PRK05599 50 SVHVLSFDAQDL------DTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADEL 123 (246)
T ss_pred ceEEEEcccCCH------HHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 577899999998 5555443 3579999999875321 112345677888877665543
Q ss_pred HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 320 KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 320 ~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+.+.-.++|++||.+..... + ....|+.||+..+.+.+..
T Consensus 124 ~~~~~~g~Iv~isS~~~~~~~---------------------------------~-----~~~~Y~asKaa~~~~~~~la 165 (246)
T PRK05599 124 RAQTAPAAIVAFSSIAGWRAR---------------------------------R-----ANYVYGSTKAGLDAFCQGLA 165 (246)
T ss_pred HhcCCCCEEEEEeccccccCC---------------------------------c-----CCcchhhHHHHHHHHHHHHH
Confidence 322123589999997543110 0 0157999999888877654
Q ss_pred ----CCCCcEEEecCCeEEe
Q psy16243 399 ----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G 414 (782)
..|+.+..+.||.+..
T Consensus 166 ~el~~~~I~v~~v~PG~v~T 185 (246)
T PRK05599 166 DSLHGSHVRLIIARPGFVIG 185 (246)
T ss_pred HHhcCCCceEEEecCCcccc
Confidence 3478888888887764
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00018 Score=77.89 Aligned_cols=75 Identities=16% Similarity=0.117 Sum_probs=52.6
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHHHHHH-
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALLEMAK- 320 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Lle~a~- 320 (782)
.++.++..|+++. ++++.+++ .+|++||+|+.... .+.++..+++|+.|+..+++.+.
T Consensus 47 ~~~~~~~~Dl~d~------~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp 120 (308)
T PLN00015 47 DSYTVMHLDLASL------DSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLD 120 (308)
T ss_pred CeEEEEEecCCCH------HHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3677889999987 66655543 47999999986421 13455788999999887766643
Q ss_pred ---HccC-CceEEEEecceec
Q psy16243 321 ---EMKQ-LKSFVHVSTAYSN 337 (782)
Q Consensus 321 ---~~~~-~~~fV~vST~~v~ 337 (782)
+.+. ..++|++||...+
T Consensus 121 ~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 121 DLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred HHHhCCCCCCEEEEEeccccc
Confidence 2211 3689999998654
|
|
| >KOG4288|consensus | Back alignment and domain information |
|---|
Probab=97.85 E-value=7.2e-05 Score=74.44 Aligned_cols=170 Identities=16% Similarity=0.152 Sum_probs=107.7
Q ss_pred cccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecc
Q psy16243 255 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTA 334 (782)
Q Consensus 255 ~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~ 334 (782)
+...+.++.||.-..+ -+.....++..++.+++-. .+...+.++|-....+-+++|++. ++++|+|||-.
T Consensus 94 w~~~vswh~gnsfssn------~~k~~l~g~t~v~e~~ggf---gn~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~ 163 (283)
T KOG4288|consen 94 WPTYVSWHRGNSFSSN------PNKLKLSGPTFVYEMMGGF---GNIILMDRINGTANINAVKAAAKA-GVPRFVYISAH 163 (283)
T ss_pred CCcccchhhccccccC------cchhhhcCCcccHHHhcCc---cchHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhh
Confidence 3456777888765442 2445556777888887643 233445667777777778888887 99999999975
Q ss_pred eeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEe
Q psy16243 335 YSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIA 414 (782)
Q Consensus 335 ~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G 414 (782)
.-. - +.-.|.+|-.+|..||.-+..-. ++.-+|+|||.+||
T Consensus 164 d~~-~-------------------------------------~~~i~rGY~~gKR~AE~Ell~~~-~~rgiilRPGFiyg 204 (283)
T KOG4288|consen 164 DFG-L-------------------------------------PPLIPRGYIEGKREAEAELLKKF-RFRGIILRPGFIYG 204 (283)
T ss_pred hcC-C-------------------------------------CCccchhhhccchHHHHHHHHhc-CCCceeeccceeec
Confidence 321 1 01123689999999998876653 36668999999999
Q ss_pred ccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhc
Q psy16243 415 TNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNV 492 (782)
Q Consensus 415 ~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 492 (782)
...- .| .-.| ......+..++...+...+..++.-+......|+|++||.+.+.++.++
T Consensus 205 ~R~v--~g----~~~p-------------L~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp 263 (283)
T KOG4288|consen 205 TRNV--GG----IKSP-------------LHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDP 263 (283)
T ss_pred cccc--Cc----cccc-------------HHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCC
Confidence 7432 11 0011 1111112222222222223445566778889999999999999988653
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00086 Score=72.34 Aligned_cols=179 Identities=18% Similarity=0.163 Sum_probs=110.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeeccc-chhhHHHHHHHhhcccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLR-ATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~-~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
..+++++|||.+. |.|+ +..+.|... +.+|++..|.. .++...+.+++
T Consensus 33 ~~~~~~vVTGans--GIG~--eta~~La~~---------------Ga~Vv~~~R~~~~~~~~~~~i~~------------ 81 (314)
T KOG1208|consen 33 LSGKVALVTGATS--GIGF--ETARELALR---------------GAHVVLACRNEERGEEAKEQIQK------------ 81 (314)
T ss_pred CCCcEEEEECCCC--chHH--HHHHHHHhC---------------CCEEEEEeCCHHHHHHHHHHHHh------------
Confidence 3468999999765 3333 334555432 57889999974 44444444432
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-----hhHHHHHHhhHHHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-----AHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-----~~~~~~~~~Nv~gt~~Lle~ 318 (782)
+....++.++..|+++. +++....+ ..|+.|++||..... +..+..+.+|..|...|.++
T Consensus 82 --~~~~~~i~~~~lDLssl------~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~l 153 (314)
T KOG1208|consen 82 --GKANQKIRVIQLDLSSL------KSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTEL 153 (314)
T ss_pred --cCCCCceEEEECCCCCH------HHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHH
Confidence 12235889999999987 56555443 359999999985332 23566788999997777666
Q ss_pred ----HHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 319 ----AKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 319 ----a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++.. ...|+|++||..- +.... -++ ++.+. .+.. .....|+.||.+-...
T Consensus 154 Llp~lk~s-~~~RIV~vsS~~~-~~~~~-~~~-----------------l~~~~----~~~~--~~~~~Y~~SKla~~l~ 207 (314)
T KOG1208|consen 154 LLPLLKRS-APSRIVNVSSILG-GGKID-LKD-----------------LSGEK----AKLY--SSDAAYALSKLANVLL 207 (314)
T ss_pred HHHHHhhC-CCCCEEEEcCccc-cCccc-hhh-----------------ccchh----ccCc--cchhHHHHhHHHHHHH
Confidence 4544 2379999999864 11100 000 00000 0000 0013599999987766
Q ss_pred HHHc----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~----~~glp~~IvRp~~v~G~ 415 (782)
..+. ..|+-+..+.||.|..+
T Consensus 208 ~~eL~k~l~~~V~~~~~hPG~v~t~ 232 (314)
T KOG1208|consen 208 ANELAKRLKKGVTTYSVHPGVVKTT 232 (314)
T ss_pred HHHHHHHhhcCceEEEECCCccccc
Confidence 6665 33788888888888764
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0012 Score=69.47 Aligned_cols=159 Identities=17% Similarity=0.172 Sum_probs=103.5
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
....+|.|+|||. .+||.-..-+.|.++ +.+|++-.-.+.+ .+.++...+
T Consensus 25 ~~~~~k~VlITGC----DSGfG~~LA~~L~~~---------------Gf~V~Agcl~~~g---ae~L~~~~~-------- 74 (322)
T KOG1610|consen 25 DSLSDKAVLITGC----DSGFGRLLAKKLDKK---------------GFRVFAGCLTEEG---AESLRGETK-------- 74 (322)
T ss_pred cccCCcEEEEecC----CcHHHHHHHHHHHhc---------------CCEEEEEeecCch---HHHHhhhhc--------
Confidence 3455899999995 566644444444333 4555555532222 222221110
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhcCc---------eEEEEcCcccCch--------hhHHHHHHhhHHHH
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNI---------HVVFHCAATVRFD--------AHLKVAVSINLRAT 312 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~v---------diViH~Aa~v~f~--------~~~~~~~~~Nv~gt 312 (782)
.++...+.-|++++ ++++++.+-| -.+||+||...+. +.++..+++|..||
T Consensus 75 ------s~rl~t~~LDVT~~------esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~ 142 (322)
T KOG1610|consen 75 ------SPRLRTLQLDVTKP------ESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGT 142 (322)
T ss_pred ------CCcceeEeeccCCH------HHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhH
Confidence 35777789999998 7777766532 4699999954332 45667899999998
Q ss_pred HHHHHH----HHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHH
Q psy16243 313 KALLEM----AKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTK 388 (782)
Q Consensus 313 ~~Lle~----a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK 388 (782)
.++... .+++ --|+|++||..- +.. .+.-.+|+.||
T Consensus 143 irvT~~~lpLlr~a--rGRvVnvsS~~G--R~~------------------------------------~p~~g~Y~~SK 182 (322)
T KOG1610|consen 143 IRVTKAFLPLLRRA--RGRVVNVSSVLG--RVA------------------------------------LPALGPYCVSK 182 (322)
T ss_pred HHHHHHHHHHHHhc--cCeEEEeccccc--Ccc------------------------------------CcccccchhhH
Confidence 777665 4544 358999999753 210 01126899999
Q ss_pred HHHHHHHHHc-----CCCCcEEEecCC
Q psy16243 389 QVAEDMVRRG-----GAGMPVAMVRPS 410 (782)
Q Consensus 389 ~~aE~ll~~~-----~~glp~~IvRp~ 410 (782)
+..|...... .-|+.++|+=||
T Consensus 183 ~aVeaf~D~lR~EL~~fGV~VsiiePG 209 (322)
T KOG1610|consen 183 FAVEAFSDSLRRELRPFGVKVSIIEPG 209 (322)
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEeccC
Confidence 9999887655 349999999999
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0013 Score=70.94 Aligned_cols=94 Identities=15% Similarity=0.078 Sum_probs=63.0
Q ss_pred CceEEEEcCccc-----Cch----hhHHHHHHhhHHHHHHHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCC
Q psy16243 284 NIHVVFHCAATV-----RFD----AHLKVAVSINLRATKALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVN 353 (782)
Q Consensus 284 ~vdiViH~Aa~v-----~f~----~~~~~~~~~Nv~gt~~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~ 353 (782)
.+|++||+||.. .+. +.++..+++|+.|+..+.+.+... ..--++|++||.......
T Consensus 120 ~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~II~isS~a~~~~~------------- 186 (303)
T PLN02730 120 SIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGASISLTYIASERII------------- 186 (303)
T ss_pred CCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechhhcCCC-------------
Confidence 479999999632 111 345578899999999988875432 112589999987532110
Q ss_pred hhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----C--CCCcEEEecCCeEEe
Q psy16243 354 PNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG----G--AGMPVAMVRPSIVIA 414 (782)
Q Consensus 354 ~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~----~--~glp~~IvRp~~v~G 414 (782)
| .+...|+.||+..+.+.+.. . .|+.+..+-||.+-.
T Consensus 187 --------------------p----~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T 229 (303)
T PLN02730 187 --------------------P----GYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGS 229 (303)
T ss_pred --------------------C----CCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccC
Confidence 0 01136999999999887665 2 378888888876654
|
|
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00098 Score=66.67 Aligned_cols=167 Identities=14% Similarity=0.128 Sum_probs=96.1
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.|.++|||..-.+|+|+ .++|+.. .+...++.-.|... .+.+.++.. .
T Consensus 3 pksv~ItGaNRGIGlgL----Vk~llk~-------------~~i~~iiat~r~~e--~a~~~l~~k-------------~ 50 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGL----VKELLKD-------------KGIEVIIATARDPE--KAATELALK-------------S 50 (249)
T ss_pred CccEEEeccCcchhHHH----HHHHhcC-------------CCcEEEEEecCChH--HhhHHHHHh-------------h
Confidence 35699999998889988 4555321 22223333333211 111111111 1
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc---------CceEEEEcCccc-Cch-------hhHHHHHHhhHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD---------NIHVVFHCAATV-RFD-------AHLKVAVSINLRATKALL 316 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~---------~vdiViH~Aa~v-~f~-------~~~~~~~~~Nv~gt~~Ll 316 (782)
...++++.++.|++.+ +.++.+.+ +.++.+++||.. .|. ..+-+.+++|+.|+..+.
T Consensus 51 ~~d~rvHii~Ldvt~d------eS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~ 124 (249)
T KOG1611|consen 51 KSDSRVHIIQLDVTCD------ESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLT 124 (249)
T ss_pred ccCCceEEEEEecccH------HHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHH
Confidence 1246899999999987 66655544 458999999973 221 223467889998877666
Q ss_pred HH----HHHcc----------CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCc
Q psy16243 317 EM----AKEMK----------QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPN 382 (782)
Q Consensus 317 e~----a~~~~----------~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn 382 (782)
+. .++.. +...+|++||....-. .. .+ ..-.
T Consensus 125 Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~-~~-----~~-----------------------------~~~~ 169 (249)
T KOG1611|consen 125 QAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG-GF-----RP-----------------------------GGLS 169 (249)
T ss_pred HHHHHHHHHHhhcccCCcccccceeEEEeeccccccC-CC-----CC-----------------------------cchh
Confidence 55 23221 1237888888643211 00 00 0116
Q ss_pred cHHHHHHHHHHHHHHcC-----CCCcEEEecCCeEE
Q psy16243 383 TYALTKQVAEDMVRRGG-----AGMPVAMVRPSIVI 413 (782)
Q Consensus 383 ~Y~~SK~~aE~ll~~~~-----~glp~~IvRp~~v~ 413 (782)
.|+.||.+--...+... .++-++-+.||+|-
T Consensus 170 AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~ 205 (249)
T KOG1611|consen 170 AYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQ 205 (249)
T ss_pred hhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEE
Confidence 89999998888777652 24445555555554
|
|
| >KOG3019|consensus | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0008 Score=66.85 Aligned_cols=157 Identities=18% Similarity=0.167 Sum_probs=102.2
Q ss_pred HHHhhHHHHHHHHHHHHHccCCc-eEEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCC
Q psy16243 304 AVSINLRATKALLEMAKEMKQLK-SFVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYW 380 (782)
Q Consensus 304 ~~~~Nv~gt~~Lle~a~~~~~~~-~fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~ 380 (782)
....-+..|..|+++...++... .+|.+|..++|-... ...|+.....
T Consensus 100 v~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qg----------------------------- 150 (315)
T KOG3019|consen 100 VKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQG----------------------------- 150 (315)
T ss_pred hhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCC-----------------------------
Confidence 34444556888999988887765 799999998886532 2333321110
Q ss_pred CccHHHHHHHH--HHHHHHcCCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhh
Q psy16243 381 PNTYALTKQVA--EDMVRRGGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAG 458 (782)
Q Consensus 381 pn~Y~~SK~~a--E~ll~~~~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~ 458 (782)
..| .|..+- |.......+..+++++|.|.|.|-.. |-...+. +.-.++
T Consensus 151 -fd~-~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gG------------------------Ga~~~M~----lpF~~g 200 (315)
T KOG3019|consen 151 -FDI-LSRLCLEWEGAALKANKDVRVALIRIGVVLGKGG------------------------GALAMMI----LPFQMG 200 (315)
T ss_pred -hHH-HHHHHHHHHHHhhccCcceeEEEEEEeEEEecCC------------------------cchhhhh----hhhhhc
Confidence 111 121111 22222234578999999999998532 1111110 011122
Q ss_pred cCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHH
Q psy16243 459 LGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEF 538 (782)
Q Consensus 459 ~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el 538 (782)
.| ...|+|++...|||+||+++.+..+++++ ...++.|-+.+ ++++..|+
T Consensus 201 ~G---GPlGsG~Q~fpWIHv~DL~~li~~ale~~-------------------------~v~GViNgvAP--~~~~n~Ef 250 (315)
T KOG3019|consen 201 AG---GPLGSGQQWFPWIHVDDLVNLIYEALENP-------------------------SVKGVINGVAP--NPVRNGEF 250 (315)
T ss_pred cC---CcCCCCCeeeeeeehHHHHHHHHHHHhcC-------------------------CCCceecccCC--CccchHHH
Confidence 22 24578999999999999999999999764 34678999999 99999999
Q ss_pred HHHHHhccccc
Q psy16243 539 MALNEKAVPEI 549 (782)
Q Consensus 539 ~~~i~~~~~~~ 549 (782)
.+.+...+++.
T Consensus 251 ~q~lg~aL~Rp 261 (315)
T KOG3019|consen 251 CQQLGSALSRP 261 (315)
T ss_pred HHHHHHHhCCC
Confidence 99999887754
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0037 Score=66.24 Aligned_cols=171 Identities=24% Similarity=0.255 Sum_probs=107.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||....+| .+.-..|.. .+.+|++..|.... ..+..+++... .+
T Consensus 6 l~gkvalVTG~s~GIG----~aia~~la~---------------~Ga~v~i~~r~~~~--~~~~~~~~~~~-~~------ 57 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIG----KAIALLLAK---------------AGAKVVITGRSEER--LEETAQELGGL-GY------ 57 (270)
T ss_pred CCCcEEEEECCCChHH----HHHHHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHhc-CC------
Confidence 5689999999643333 222233321 26788888886432 22222222111 11
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh--------cCceEEEEcCcccCch--------hhHHHHHHhhHHH-HHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV--------DNIHVVFHCAATVRFD--------AHLKVAVSINLRA-TKA 314 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~--------~~vdiViH~Aa~v~f~--------~~~~~~~~~Nv~g-t~~ 314 (782)
.-.++..+.+|++++ ++.+++. .++|+++++|+..... +.++..+++|+.| +..
T Consensus 58 ---~~~~~~~~~~Dv~~~------~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~ 128 (270)
T KOG0725|consen 58 ---TGGKVLAIVCDVSKE------VDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFC 128 (270)
T ss_pred ---CCCeeEEEECcCCCH------HHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHH
Confidence 135799999999976 4444433 3579999999975432 3455678899995 666
Q ss_pred HHHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 315 LLEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 315 Lle~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
+...+..+ .+-..++++||........ ..+..|+.||...
T Consensus 129 ~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~-------------------------------------~~~~~Y~~sK~al 171 (270)
T KOG0725|consen 129 LKQAARPMLKKSKGGSIVNISSVAGVGPGP-------------------------------------GSGVAYGVSKAAL 171 (270)
T ss_pred HHHHHHHHHHhcCCceEEEEeccccccCCC-------------------------------------CCcccchhHHHHH
Confidence 66665433 2345688888875443211 0114799999999
Q ss_pred HHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 392 EDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 392 E~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+++.+.. ..|+++..+-||.|..+.
T Consensus 172 ~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 172 LQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred HHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 9998776 358999999999888754
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.002 Score=86.36 Aligned_cols=111 Identities=12% Similarity=0.065 Sum_probs=79.4
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHcc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEMK 323 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~~ 323 (782)
.++.++.+|+++. +++..+++ .+|.|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 2094 ~~v~y~~~DVtD~------~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~- 2166 (2582)
T TIGR02813 2094 ASAEYASADVTNS------VSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAE- 2166 (2582)
T ss_pred CcEEEEEccCCCH------HHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 3688899999997 66665554 37999999997432 1456678999999999999998764
Q ss_pred CCceEEEEeccee-ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC---
Q psy16243 324 QLKSFVHVSTAYS-NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--- 399 (782)
Q Consensus 324 ~~~~fV~vST~~v-~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--- 399 (782)
..+++|++||... +|... ...|+.+|..-+.+.....
T Consensus 2167 ~~~~IV~~SSvag~~G~~g---------------------------------------qs~YaaAkaaL~~la~~la~~~ 2207 (2582)
T TIGR02813 2167 NIKLLALFSSAAGFYGNTG---------------------------------------QSDYAMSNDILNKAALQLKALN 2207 (2582)
T ss_pred CCCeEEEEechhhcCCCCC---------------------------------------cHHHHHHHHHHHHHHHHHHHHc
Confidence 5678999999854 33321 1569999988777665552
Q ss_pred CCCcEEEecCCeEE
Q psy16243 400 AGMPVAMVRPSIVI 413 (782)
Q Consensus 400 ~glp~~IvRp~~v~ 413 (782)
.++.+..+.||.+-
T Consensus 2208 ~~irV~sI~wG~wd 2221 (2582)
T TIGR02813 2208 PSAKVMSFNWGPWD 2221 (2582)
T ss_pred CCcEEEEEECCeec
Confidence 24566666665443
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1203|consensus | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00056 Score=75.24 Aligned_cols=166 Identities=19% Similarity=0.254 Sum_probs=96.4
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
...+|+|.|.+|..|-=+ .+.|+.. +..+++++|..... +++.+. .+
T Consensus 78 ~~~~VlVvGatG~vG~~i----v~~llkr---------------gf~vra~VRd~~~a------~~~~~~-~~------- 124 (411)
T KOG1203|consen 78 KPTTVLVVGATGKVGRRI----VKILLKR---------------GFSVRALVRDEQKA------EDLLGV-FF------- 124 (411)
T ss_pred CCCeEEEecCCCchhHHH----HHHHHHC---------------CCeeeeeccChhhh------hhhhcc-cc-------
Confidence 457899999777766444 3444333 57889999975422 122110 00
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcC----ceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceE
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN----IHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSF 328 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~----vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~f 328 (782)
.-.....+..|...+ .+....+.+. +.+++-|++...-.++...-..+...|+++++++|+.+ +++++
T Consensus 125 --~d~~~~~v~~~~~~~-----~d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~ 196 (411)
T KOG1203|consen 125 --VDLGLQNVEADVVTA-----IDILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRV 196 (411)
T ss_pred --cccccceeeeccccc-----cchhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceE
Confidence 011233344443332 0222333332 34666666654322212223457888999999999998 99999
Q ss_pred EEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEec
Q psy16243 329 VHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVR 408 (782)
Q Consensus 329 V~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvR 408 (782)
|++|++...-... ++ +.-..-..+-..|..+|..+.+ .|++.+|+|
T Consensus 197 vlv~si~~~~~~~--------~~------------------------~~~~~~~~~~~~k~~~e~~~~~--Sgl~ytiIR 242 (411)
T KOG1203|consen 197 VLVGSIGGTKFNQ--------PP------------------------NILLLNGLVLKAKLKAEKFLQD--SGLPYTIIR 242 (411)
T ss_pred EEEEeecCcccCC--------Cc------------------------hhhhhhhhhhHHHHhHHHHHHh--cCCCcEEEe
Confidence 9998876432211 00 0000002445788899998875 489999999
Q ss_pred CCeEE
Q psy16243 409 PSIVI 413 (782)
Q Consensus 409 p~~v~ 413 (782)
|+...
T Consensus 243 ~g~~~ 247 (411)
T KOG1203|consen 243 PGGLE 247 (411)
T ss_pred ccccc
Confidence 98765
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.001 Score=66.56 Aligned_cols=125 Identities=14% Similarity=0.197 Sum_probs=78.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|.+++||+.+.+|.-++ +.|..+ ......++-|..+ ......+++.
T Consensus 3 ~tGKna~vtggagGIGl~~s----k~Ll~k--------------gik~~~i~~~~En-~~a~akL~ai------------ 51 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATS----KALLEK--------------GIKVLVIDDSEEN-PEAIAKLQAI------------ 51 (261)
T ss_pred ccCceEEEecCCchhhHHHH----HHHHHc--------------CchheeehhhhhC-HHHHHHHhcc------------
Confidence 56899999998777666553 444433 1233444444433 1122222222
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCchhhHHHHHHhhHHH----HHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFDAHLKVAVSINLRA----TKALLEMAK 320 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~~~~~~~~~~Nv~g----t~~Lle~a~ 320 (782)
....++.|+..|+++. .+++..++ .+|++|+.|+..+ +.+++..+.+|..| |.-.+.+..
T Consensus 52 --~p~~~v~F~~~DVt~~------~~~~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMd 122 (261)
T KOG4169|consen 52 --NPSVSVIFIKCDVTNR------GDLEAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALPYMD 122 (261)
T ss_pred --CCCceEEEEEeccccH------HHHHHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhhhhh
Confidence 1235899999999996 56665554 4699999999866 67788888999665 555566554
Q ss_pred Hcc--CCceEEEEeccee
Q psy16243 321 EMK--QLKSFVHVSTAYS 336 (782)
Q Consensus 321 ~~~--~~~~fV~vST~~v 336 (782)
+-. .---+|.+||.+-
T Consensus 123 k~~gG~GGiIvNmsSv~G 140 (261)
T KOG4169|consen 123 KKQGGKGGIIVNMSSVAG 140 (261)
T ss_pred hhcCCCCcEEEEeccccc
Confidence 332 2345788888753
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0055 Score=63.91 Aligned_cols=110 Identities=21% Similarity=0.276 Sum_probs=76.3
Q ss_pred cceeEEecCCCC-CCCCCCHHhHHHHhc-------CceEEEEcCcccC----ch----hhHHHHHHhhHHHHHHHHHHHH
Q psy16243 257 SKMVAVTGDCLK-PGVGINSEDRQTLVD-------NIHVVFHCAATVR----FD----AHLKVAVSINLRATKALLEMAK 320 (782)
Q Consensus 257 ~kv~~i~gDi~~-~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f~----~~~~~~~~~Nv~gt~~Lle~a~ 320 (782)
..+.+...|+++ + ++.+.+++ .+|+++|+|+... +. +.++..+++|+.|...+.+++.
T Consensus 57 ~~~~~~~~Dvs~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~ 130 (251)
T COG1028 57 GRAAAVAADVSDDE------ESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAAL 130 (251)
T ss_pred CcEEEEEecCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 367788899997 4 44443332 3799999999743 21 4456788999999999888544
Q ss_pred HccCCc--eEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 321 EMKQLK--SFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 321 ~~~~~~--~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
. ..+ ++|.+||.... ..... ...|+.||+..+.+....
T Consensus 131 ~--~~~~~~Iv~isS~~~~-~~~~~-------------------------------------~~~Y~~sK~al~~~~~~l 170 (251)
T COG1028 131 P--LMKKQRIVNISSVAGL-GGPPG-------------------------------------QAAYAASKAALIGLTKAL 170 (251)
T ss_pred H--hhhhCeEEEECCchhc-CCCCC-------------------------------------cchHHHHHHHHHHHHHHH
Confidence 3 233 89999998654 21100 157999999998887665
Q ss_pred -----CCCCcEEEecCCeE
Q psy16243 399 -----GAGMPVAMVRPSIV 412 (782)
Q Consensus 399 -----~~glp~~IvRp~~v 412 (782)
..|+.+..+-||.+
T Consensus 171 ~~e~~~~gi~v~~v~PG~~ 189 (251)
T COG1028 171 ALELAPRGIRVNAVAPGYI 189 (251)
T ss_pred HHHHhhhCcEEEEEEeccC
Confidence 24788888888833
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.028 Score=55.05 Aligned_cols=175 Identities=24% Similarity=0.296 Sum_probs=107.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|...|||. +.|+..+.-+.|... +.++.+..+.+. .+++-.+.+-. |
T Consensus 12 ~~sk~~~vtGg----~sGIGrAia~~la~~---------------Garv~v~dl~~~--~A~ata~~L~g---~------ 61 (256)
T KOG1200|consen 12 LMSKVAAVTGG----SSGIGRAIAQLLAKK---------------GARVAVADLDSA--AAEATAGDLGG---Y------ 61 (256)
T ss_pred HhcceeEEecC----CchHHHHHHHHHHhc---------------CcEEEEeecchh--hHHHHHhhcCC---C------
Confidence 34788999995 566644434444322 566666665443 23333333311 1
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
..-....+|++++ .+.+..++ .++++++||+..+.. +.+++.+.+|+.|+..+-+
T Consensus 62 -----~~h~aF~~DVS~a------~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tq 130 (256)
T KOG1200|consen 62 -----GDHSAFSCDVSKA------HDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQ 130 (256)
T ss_pred -----CccceeeeccCcH------HHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHH
Confidence 1234567899887 55544333 469999999986532 5677889999999998888
Q ss_pred HHHHc---c--CCceEEEEecce-eccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 318 MAKEM---K--QLKSFVHVSTAY-SNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 318 ~a~~~---~--~~~~fV~vST~~-v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
++.+. . +--++|.+||+- -.|+. ...-|.. +. ...-|+||.+|
T Consensus 131 aa~r~~~~~~~~~~sIiNvsSIVGkiGN~---GQtnYAA----------------------sK------~GvIgftktaA 179 (256)
T KOG1200|consen 131 AAVRAMVMNQQQGLSIINVSSIVGKIGNF---GQTNYAA----------------------SK------GGVIGFTKTAA 179 (256)
T ss_pred HHHHHHHHhcCCCceEEeehhhhcccccc---cchhhhh----------------------hc------CceeeeeHHHH
Confidence 76443 1 223899999973 22321 1111111 00 13456777887
Q ss_pred HHHHHHcCCCCcEEEecCCeEEeccCCCCc
Q psy16243 392 EDMVRRGGAGMPVAMVRPSIVIATNKEPIP 421 (782)
Q Consensus 392 E~ll~~~~~glp~~IvRp~~v~G~~~~p~~ 421 (782)
..+.+ +++++-.+-||.|-.|..+..|
T Consensus 180 rEla~---knIrvN~VlPGFI~tpMT~~mp 206 (256)
T KOG1200|consen 180 RELAR---KNIRVNVVLPGFIATPMTEAMP 206 (256)
T ss_pred HHHhh---cCceEeEeccccccChhhhhcC
Confidence 77654 5899999999999877655444
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0079 Score=64.83 Aligned_cols=94 Identities=17% Similarity=0.136 Sum_probs=63.1
Q ss_pred CceEEEEcCcccC-----ch----hhHHHHHHhhHHHHHHHHHHHHH-ccCCceEEEEecceeccCCCcccccccCCCCC
Q psy16243 284 NIHVVFHCAATVR-----FD----AHLKVAVSINLRATKALLEMAKE-MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVN 353 (782)
Q Consensus 284 ~vdiViH~Aa~v~-----f~----~~~~~~~~~Nv~gt~~Lle~a~~-~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~ 353 (782)
.+|++||+|+... +. +.++..+++|+.|+.++++++.. +..-.++|.+||.......
T Consensus 119 ~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~~------------- 185 (299)
T PRK06300 119 HIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAV------------- 185 (299)
T ss_pred CCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCcC-------------
Confidence 4799999997521 21 34556789999999999988654 2222468888876432110
Q ss_pred hhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CC-CCcEEEecCCeEEe
Q psy16243 354 PNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GA-GMPVAMVRPSIVIA 414 (782)
Q Consensus 354 ~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~-glp~~IvRp~~v~G 414 (782)
|. +...|+.||..-+.+.+.. .. |+.+..+.||.+-.
T Consensus 186 --------------------p~----~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T 228 (299)
T PRK06300 186 --------------------PG----YGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLAS 228 (299)
T ss_pred --------------------CC----ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccC
Confidence 00 0026999999998887654 22 78888888887654
|
|
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.013 Score=61.78 Aligned_cols=101 Identities=19% Similarity=0.285 Sum_probs=62.4
Q ss_pred cceeeeeecccchhhHHHHHHHhhcccccccccccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEE
Q psy16243 217 HLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVF 289 (782)
Q Consensus 217 ~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiVi 289 (782)
+.+|.+..|+.+. .++..+. ++. .....+|.+..+|+.+. +.....++ .+|.+|
T Consensus 57 ga~Vti~ar~~~k--l~~a~~~-l~l----------~~~~~~v~~~S~d~~~Y------~~v~~~~~~l~~~~~~~d~l~ 117 (331)
T KOG1210|consen 57 GADVTITARSGKK--LLEAKAE-LEL----------LTQVEDVSYKSVDVIDY------DSVSKVIEELRDLEGPIDNLF 117 (331)
T ss_pred cCceEEEeccHHH--HHHHHhh-hhh----------hhccceeeEeccccccH------HHHHHHHhhhhhccCCcceEE
Confidence 5678999997542 2222221 111 01223478899999665 44444443 359999
Q ss_pred EcCccc--C-ch----hhHHHHHHhhHHHHHHHHHHHH-HccCCc---eEEEEeccee
Q psy16243 290 HCAATV--R-FD----AHLKVAVSINLRATKALLEMAK-EMKQLK---SFVHVSTAYS 336 (782)
Q Consensus 290 H~Aa~v--~-f~----~~~~~~~~~Nv~gt~~Lle~a~-~~~~~~---~fV~vST~~v 336 (782)
|||+.. + |. +..+..+++|..||.+++.++. .++... +++.+||..+
T Consensus 118 ~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a 175 (331)
T KOG1210|consen 118 CCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLA 175 (331)
T ss_pred EecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhh
Confidence 999873 1 11 3345678999999999988743 333333 8888888743
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.011 Score=61.51 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=92.8
Q ss_pred cceeeeeecccchhhHHHHHHHhhcccccccccccCcccccceeEEecCCCCCCCCCCHHhHHHHh--------cCceEE
Q psy16243 217 HLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLV--------DNIHVV 288 (782)
Q Consensus 217 ~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~--------~~vdiV 288 (782)
+.+|++..|.... ..+.++++.+. .+ ..++.+|++++ ++++.++ ..+|++
T Consensus 20 Ga~V~~~~~~~~~--~~~~~~~l~~~---------~~-----~~~~~~D~~~~------~~v~~~~~~~~~~~~g~iD~l 77 (241)
T PF13561_consen 20 GANVILTDRNEEK--LADALEELAKE---------YG-----AEVIQCDLSDE------ESVEALFDEAVERFGGRIDIL 77 (241)
T ss_dssp TEEEEEEESSHHH--HHHHHHHHHHH---------TT-----SEEEESCTTSH------HHHHHHHHHHHHHHCSSESEE
T ss_pred CCEEEEEeCChHH--HHHHHHHHHHH---------cC-----CceEeecCcch------HHHHHHHHHHHhhcCCCeEEE
Confidence 6788888887542 22233333221 11 22499999987 7776663 457999
Q ss_pred EEcCcccCc-----------hhhHHHHHHhhHHHHHHHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhH
Q psy16243 289 FHCAATVRF-----------DAHLKVAVSINLRATKALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNH 356 (782)
Q Consensus 289 iH~Aa~v~f-----------~~~~~~~~~~Nv~gt~~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~ 356 (782)
+|+|+.... .+.+...+++|+.++..+++.+... +.-.++|++||.......
T Consensus 78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~---------------- 141 (241)
T PF13561_consen 78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPM---------------- 141 (241)
T ss_dssp EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBS----------------
T ss_pred EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccC----------------
Confidence 999987543 1344567889999999998886432 223689999987543211
Q ss_pred HHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----C-CCCcEEEecCCeEEe
Q psy16243 357 LIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----G-AGMPVAMVRPSIVIA 414 (782)
Q Consensus 357 ~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~-~glp~~IvRp~~v~G 414 (782)
+....|+.+|..-+.+++.. . .|+++..+.||.+..
T Consensus 142 ----------------------~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t 183 (241)
T PF13561_consen 142 ----------------------PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIET 183 (241)
T ss_dssp ----------------------TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSS
T ss_pred ----------------------ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceec
Confidence 01158999999999998775 4 589999999887764
|
... |
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.027 Score=55.75 Aligned_cols=162 Identities=17% Similarity=0.181 Sum_probs=97.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+.+|+|||..+.+|++| -+.+.+- +.+|++-.|. ++|+.+.++.
T Consensus 3 ~tgnTiLITGG~sGIGl~l----ak~f~el---------------gN~VIi~gR~------e~~L~e~~~~--------- 48 (245)
T COG3967 3 TTGNTILITGGASGIGLAL----AKRFLEL---------------GNTVIICGRN------EERLAEAKAE--------- 48 (245)
T ss_pred ccCcEEEEeCCcchhhHHH----HHHHHHh---------------CCEEEEecCc------HHHHHHHHhc---------
Confidence 3578999999654444444 3333221 4566666664 4566655431
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCccc---Cch------hhHHHHHHhhHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATV---RFD------AHLKVAVSINLRATKAL 315 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v---~f~------~~~~~~~~~Nv~gt~~L 315 (782)
.+.+.-..+|+.|. +.++++.+ ..+++|++||.. +|. +..++-+.+|..++.+|
T Consensus 49 ----~p~~~t~v~Dv~d~------~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~L 118 (245)
T COG3967 49 ----NPEIHTEVCDVADR------DSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRL 118 (245)
T ss_pred ----Ccchheeeecccch------hhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHH
Confidence 23566677888876 44444443 359999999974 222 22345678999999998
Q ss_pred HHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 316 LEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 316 le~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
..+.... +.-..+|-|||.-.+-... ..-.|..||+...
T Consensus 119 t~~~lphl~~q~~a~IInVSSGLafvPm~--------------------------------------~~PvYcaTKAaiH 160 (245)
T COG3967 119 TALLLPHLLRQPEATIINVSSGLAFVPMA--------------------------------------STPVYCATKAAIH 160 (245)
T ss_pred HHHHHHHHHhCCCceEEEeccccccCccc--------------------------------------ccccchhhHHHHH
Confidence 8774332 1235689999975543211 0136888888766
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+-... ..++.+.=+-|+.|--+
T Consensus 161 syt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 161 SYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHHHHhhhcceEEEEecCCceecC
Confidence 554333 12566666777777653
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.028 Score=55.82 Aligned_cols=143 Identities=16% Similarity=0.183 Sum_probs=90.3
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.|.|+||| |.+.|.| .+.-.++.+ ++..|++..|... +..++.
T Consensus 7 ~k~VlItg-cs~GGIG--~ala~ef~~---------------~G~~V~AtaR~~e------~M~~L~------------- 49 (289)
T KOG1209|consen 7 PKKVLITG-CSSGGIG--YALAKEFAR---------------NGYLVYATARRLE------PMAQLA------------- 49 (289)
T ss_pred CCeEEEee-cCCcchh--HHHHHHHHh---------------CCeEEEEEccccc------hHhhHH-------------
Confidence 57899999 3333444 333344433 3678888888643 222211
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc--------CceEEEEcCcccC-c------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD--------NIHVVFHCAATVR-F------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~--------~vdiViH~Aa~v~-f------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.+..-|++++ ++..+... +.|+.+++|+..- + ....+..+++|+.|..++.++
T Consensus 50 -~~~gl~~~kLDV~~~------~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a 122 (289)
T KOG1209|consen 50 -IQFGLKPYKLDVSKP------EEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRA 122 (289)
T ss_pred -HhhCCeeEEeccCCh------HHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHH
Confidence 113566778888887 55544433 3589999998631 1 134556889999998888777
Q ss_pred HHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 319 AKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 319 a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
..++ +.--.+|++.|..++-. .+|...|..||++--.+..
T Consensus 123 ~~h~likaKGtIVnvgSl~~~vp--------------------------------------fpf~~iYsAsKAAihay~~ 164 (289)
T KOG1209|consen 123 LSHFLIKAKGTIVNVGSLAGVVP--------------------------------------FPFGSIYSASKAAIHAYAR 164 (289)
T ss_pred HHHHHHHccceEEEecceeEEec--------------------------------------cchhhhhhHHHHHHHHhhh
Confidence 5543 22347899998876532 1344789999998777665
Q ss_pred Hc
Q psy16243 397 RG 398 (782)
Q Consensus 397 ~~ 398 (782)
..
T Consensus 165 tL 166 (289)
T KOG1209|consen 165 TL 166 (289)
T ss_pred hc
Confidence 54
|
|
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.022 Score=54.58 Aligned_cols=162 Identities=21% Similarity=0.236 Sum_probs=101.7
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+++|++||. |.|+..+..+.|. +. +.+|+...|... .+..+.. +.
T Consensus 6 aG~~vlvTga----gaGIG~~~v~~La----------~a-----GA~ViAvaR~~a------~L~sLV~---------e~ 51 (245)
T KOG1207|consen 6 AGVIVLVTGA----GAGIGKEIVLSLA----------KA-----GAQVIAVARNEA------NLLSLVK---------ET 51 (245)
T ss_pred cceEEEeecc----cccccHHHHHHHH----------hc-----CCEEEEEecCHH------HHHHHHh---------hC
Confidence 4789999995 7777655455552 22 678888888532 2222211 11
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcC---ceEEEEcCccc---Cch----hhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN---IHVVFHCAATV---RFD----AHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~---vdiViH~Aa~v---~f~----~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
| ..+.++.+|++.. +.+.+++.. +|..++.||.. .|. ++.+..+++|+.+...+.+...+.
T Consensus 52 p---~~I~Pi~~Dls~w------ea~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~ 122 (245)
T KOG1207|consen 52 P---SLIIPIVGDLSAW------EALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARN 122 (245)
T ss_pred C---cceeeeEecccHH------HHHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHh
Confidence 2 3589999999875 566666654 48899999863 222 233345678999988887773321
Q ss_pred ----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 323 ----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 323 ----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
..--.+|.+||.+....- . -...|..||.+-+.+-...
T Consensus 123 lv~R~~~GaIVNvSSqas~R~~---~-----------------------------------nHtvYcatKaALDmlTk~l 164 (245)
T KOG1207|consen 123 LVDRQIKGAIVNVSSQASIRPL---D-----------------------------------NHTVYCATKAALDMLTKCL 164 (245)
T ss_pred hhhccCCceEEEecchhccccc---C-----------------------------------CceEEeecHHHHHHHHHHH
Confidence 112358999987643210 0 0157888888877665443
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
...+++-.+-|..|.-.
T Consensus 165 AlELGp~kIRVNsVNPTVVmT~ 186 (245)
T KOG1207|consen 165 ALELGPQKIRVNSVNPTVVMTD 186 (245)
T ss_pred HHhhCcceeEeeccCCeEEEec
Confidence 34678888888877753
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.039 Score=55.51 Aligned_cols=92 Identities=17% Similarity=0.115 Sum_probs=65.1
Q ss_pred ceEEEEcCcccCc----------hhhHHHHHHhhHHHHHHHHHHHHHc-cCC---ceEEEEecceeccCCCcccccccCC
Q psy16243 285 IHVVFHCAATVRF----------DAHLKVAVSINLRATKALLEMAKEM-KQL---KSFVHVSTAYSNCRQPIIEERFYEP 350 (782)
Q Consensus 285 vdiViH~Aa~v~f----------~~~~~~~~~~Nv~gt~~Lle~a~~~-~~~---~~fV~vST~~v~~~~~~i~E~~~~~ 350 (782)
-++|||+||.... ...++.+++.|+.+...|...+... ++. +-+|++||.++.-.
T Consensus 83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p----------- 151 (253)
T KOG1204|consen 83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRP----------- 151 (253)
T ss_pred eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhcc-----------
Confidence 5999999998532 1345678999999988887765432 233 56899999865432
Q ss_pred CCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---C-CCCcEEEecCCeEEe
Q psy16243 351 PVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG---G-AGMPVAMVRPSIVIA 414 (782)
Q Consensus 351 ~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~---~-~glp~~IvRp~~v~G 414 (782)
.+.| ..|+.+|++-+.+.+.. . .++.+..++||.|=-
T Consensus 152 ----------------------~~~w-----a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT 192 (253)
T KOG1204|consen 152 ----------------------FSSW-----AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDT 192 (253)
T ss_pred ----------------------ccHH-----HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccc
Confidence 1122 67999999999988765 2 377788888887643
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.012 Score=62.82 Aligned_cols=121 Identities=15% Similarity=0.010 Sum_probs=73.6
Q ss_pred HHhccccceeeecCcCccCCCCCCccccCceeEEEecccc-----------------ccccccccccCCCCCCeEEEEec
Q psy16243 10 SRQRFEEIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS-----------------LNSCLPGERLDHYTTESFVHVST 72 (782)
Q Consensus 10 ~~~~~~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~-----------------~~~~~~~~~~~~~~l~~f~hvst 72 (782)
..+.++....+.|||..++. +. .....+++|||+||. .|+.-+.+.....+.++|||+||
T Consensus 40 ~~~~~~~~~~~~~Di~d~~~-l~--~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS 116 (280)
T PF01073_consen 40 DLQKSGVKEYIQGDITDPES-LE--EALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSS 116 (280)
T ss_pred hhhcccceeEEEeccccHHH-HH--HHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 34555555588999988755 21 244469999999995 23333333333447899999999
Q ss_pred ccccCCCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcC-------CCCeEEE
Q psy16243 73 AYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG-------AGMPVAM 145 (782)
Q Consensus 73 a~~~~~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~-------~~~~~~i 145 (782)
+.+..+... ..+++....+ .| .-..+.+.|..+|+++|+++.... .....+.
T Consensus 117 ~~vv~~~~~-~~~~~~~dE~-------------------~~-~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~ 175 (280)
T PF01073_consen 117 ISVVFDNYK-GDPIINGDED-------------------TP-YPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCA 175 (280)
T ss_pred cceeEeccC-CCCcccCCcC-------------------Cc-ccccccCchHHHHHHHHHHHHhhcccccccccceeEEE
Confidence 988654111 1122211000 00 000133459999999999987632 2356789
Q ss_pred eCCCccccc
Q psy16243 146 VRPSIDLGI 154 (782)
Q Consensus 146 vRps~~~~~ 154 (782)
+||..+.+.
T Consensus 176 lRP~~IyGp 184 (280)
T PF01073_consen 176 LRPAGIYGP 184 (280)
T ss_pred EeccEEeCc
Confidence 999877653
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.011 Score=61.86 Aligned_cols=101 Identities=23% Similarity=0.156 Sum_probs=68.6
Q ss_pred ceeeecCcCccCCCCCCccccCceeEEEecccc------------------ccccccccccCCCCCCeEEEEecccccCC
Q psy16243 17 IFEGEGLSGILSLGLNLNQKSGPISASKNSTAS------------------LNSCLPGERLDHYTTESFVHVSTAYSNCR 78 (782)
Q Consensus 17 ~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~------------------~~~~~~~~~~~~~~l~~f~hvsta~~~~~ 78 (782)
.....||+..-.+ |..--....+++||||||. .++..|.+.|...+.+.|||-|||-.-+.
T Consensus 46 ~~f~~gDi~D~~~-L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~ 124 (329)
T COG1087 46 FKFYEGDLLDRAL-LTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGE 124 (329)
T ss_pred CceEEeccccHHH-HHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCC
Confidence 5778899876533 3221222248999999997 77888888888667999999999988665
Q ss_pred CCC--cceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeC
Q psy16243 79 QPI--IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVR 147 (782)
Q Consensus 79 ~~~--ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivR 147 (782)
-.. |.|+.-..+ -|.|..+|.+.|++++.. ..+..+++.|
T Consensus 125 p~~~PI~E~~~~~p-----------------------------~NPYG~sKlm~E~iL~d~~~a~~~~~v~LR 168 (329)
T COG1087 125 PTTSPISETSPLAP-----------------------------INPYGRSKLMSEEILRDAAKANPFKVVILR 168 (329)
T ss_pred CCCcccCCCCCCCC-----------------------------CCcchhHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 332 222211110 135999999999999873 3336667777
|
|
| >KOG1478|consensus | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.26 Score=50.34 Aligned_cols=188 Identities=14% Similarity=0.140 Sum_probs=103.1
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
..|+++|||..+..|++++ .+|+..-| -+....+.+..|.. ..+++-+.+++.. +
T Consensus 2 ~RKvalITGanSglGl~i~----~RLl~~~D----------e~~~ltl~ltcR~~--~kae~vc~~lk~f---------~ 56 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAIC----KRLLAEDD----------ENVRLTLCLTCRNM--SKAEAVCAALKAF---------H 56 (341)
T ss_pred CceEEEEecCCCcccHHHH----HHHHhccC----------CceeEEEEEEeCCh--hHHHHHHHHHHHh---------C
Confidence 3689999999888887773 44443211 11123445555542 2344555554431 2
Q ss_pred cccccceeEEecCCCCCCCCC-CHHhHHHHhcCceEEEEcCcccCch---------------------------------
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGI-NSEDRQTLVDNIHVVFHCAATVRFD--------------------------------- 298 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl-~~~~~~~l~~~vdiViH~Aa~v~f~--------------------------------- 298 (782)
|+...+++.+..|+++-.-=+ ...++.+-++..|.|+-+||...+.
T Consensus 57 p~~~i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is 136 (341)
T KOG1478|consen 57 PKSTIEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKIS 136 (341)
T ss_pred CCceeEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceec
Confidence 444568899999998751000 0012333344568888888864321
Q ss_pred -hhHHHHHHhhHHHHHHHHHHHHH---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcC
Q psy16243 299 -AHLKVAVSINLRATKALLEMAKE---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITP 374 (782)
Q Consensus 299 -~~~~~~~~~Nv~gt~~Lle~a~~---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p 374 (782)
+.+.+.+++||.|..-++.-... .+.-+.+|.+||..+-...-. -|+ ++...
T Consensus 137 ~D~lg~iFetnVFGhfyli~~l~pll~~~~~~~lvwtSS~~a~kk~ls-leD----------------------~q~~k- 192 (341)
T KOG1478|consen 137 ADGLGEIFETNVFGHFYLIRELEPLLCHSDNPQLVWTSSRMARKKNLS-LED----------------------FQHSK- 192 (341)
T ss_pred ccchhhHhhhcccchhhhHhhhhhHhhcCCCCeEEEEeecccccccCC-HHH----------------------Hhhhc-
Confidence 12235678899998776654221 123458999999765322111 111 11111
Q ss_pred CccCCCCccHHHHHHHHHHHHHHc-CC----CCcEEEecCCeEEe
Q psy16243 375 GIVDYWPNTYALTKQVAEDMVRRG-GA----GMPVAMVRPSIVIA 414 (782)
Q Consensus 375 ~~~~~~pn~Y~~SK~~aE~ll~~~-~~----glp~~IvRp~~v~G 414 (782)
+ ..+|..||.+.+-+-.+. .. |+.--++.||+...
T Consensus 193 ---g--~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt 232 (341)
T KOG1478|consen 193 ---G--KEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTT 232 (341)
T ss_pred ---C--CCCcchhHHHHHHHHHHHhccccccchhhhcccCceeec
Confidence 0 157999999988765444 22 44445566665543
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.2 Score=48.92 Aligned_cols=155 Identities=16% Similarity=0.143 Sum_probs=97.5
Q ss_pred eeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCccc
Q psy16243 176 MVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHY 255 (782)
Q Consensus 176 ~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~ 255 (782)
.|.|.|..|..|+.+. ++.. ..++.|.+++|..+... .
T Consensus 2 KIaiIgAsG~~Gs~i~----~EA~---------------~RGHeVTAivRn~~K~~-----------------------~ 39 (211)
T COG2910 2 KIAIIGASGKAGSRIL----KEAL---------------KRGHEVTAIVRNASKLA-----------------------A 39 (211)
T ss_pred eEEEEecCchhHHHHH----HHHH---------------hCCCeeEEEEeChHhcc-----------------------c
Confidence 3678888888887663 2222 23688999999754110 1
Q ss_pred ccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecce
Q psy16243 256 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAY 335 (782)
Q Consensus 256 ~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~ 335 (782)
.+.+..++.|+.++ +.+.+.+.+.|+||..=+...- .+. .........|++..+.+ +++|++.|.-+.
T Consensus 40 ~~~~~i~q~Difd~------~~~a~~l~g~DaVIsA~~~~~~-~~~----~~~~k~~~~li~~l~~a-gv~RllVVGGAG 107 (211)
T COG2910 40 RQGVTILQKDIFDL------TSLASDLAGHDAVISAFGAGAS-DND----ELHSKSIEALIEALKGA-GVPRLLVVGGAG 107 (211)
T ss_pred cccceeecccccCh------hhhHhhhcCCceEEEeccCCCC-Chh----HHHHHHHHHHHHHHhhc-CCeeEEEEcCcc
Confidence 14678899999998 7778888999999976433211 111 11222367788888876 789999887664
Q ss_pred eccCCCccccc--ccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH--HHHcCCCCcEEEecCCe
Q psy16243 336 SNCRQPIIEER--FYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM--VRRGGAGMPVAMVRPSI 411 (782)
Q Consensus 336 v~~~~~~i~E~--~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l--l~~~~~glp~~IvRp~~ 411 (782)
+.- +.|. ... +|..+. -.|...+..+|.+ ++. ..++.++.+-|+.
T Consensus 108 SL~----id~g~rLvD-----------------------~p~fP~---ey~~~A~~~ae~L~~Lr~-~~~l~WTfvSPaa 156 (211)
T COG2910 108 SLE----IDEGTRLVD-----------------------TPDFPA---EYKPEALAQAEFLDSLRA-EKSLDWTFVSPAA 156 (211)
T ss_pred ceE----EcCCceeec-----------------------CCCCch---hHHHHHHHHHHHHHHHhh-ccCcceEEeCcHH
Confidence 321 1111 000 222222 4578888888854 333 3459999999998
Q ss_pred EEec
Q psy16243 412 VIAT 415 (782)
Q Consensus 412 v~G~ 415 (782)
.+-|
T Consensus 157 ~f~P 160 (211)
T COG2910 157 FFEP 160 (211)
T ss_pred hcCC
Confidence 8866
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.31 Score=51.57 Aligned_cols=169 Identities=17% Similarity=0.202 Sum_probs=102.0
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHH-HhhcccccccccccC
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAK-EMKQLKFFDPMRKRC 252 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~-~~~~~~~f~~l~~~~ 252 (782)
++-.+|||.+..+|-.+ -++|..+ +.+|+++-|..+ -+++.+ ++.+.
T Consensus 49 g~WAVVTGaTDGIGKay----A~eLAkr---------------G~nvvLIsRt~~---KL~~v~kEI~~~---------- 96 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAY----ARELAKR---------------GFNVVLISRTQE---KLEAVAKEIEEK---------- 96 (312)
T ss_pred CCEEEEECCCCcchHHH----HHHHHHc---------------CCEEEEEeCCHH---HHHHHHHHHHHH----------
Confidence 36689999876666544 3445432 788999999643 333433 22211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccC-chh--------hHHHHHHhhHHHHHHHHHHHH-
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVR-FDA--------HLKVAVSINLRATKALLEMAK- 320 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~-f~~--------~~~~~~~~Nv~gt~~Lle~a~- 320 (782)
..-.+..+..|.++++- .-+.+.+.+++ |.+.|++++... ..+ .+...+.+|+.++..+.+...
T Consensus 97 --~~vev~~i~~Dft~~~~--~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp 172 (312)
T KOG1014|consen 97 --YKVEVRIIAIDFTKGDE--VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILP 172 (312)
T ss_pred --hCcEEEEEEEecCCCch--hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhh
Confidence 11468889999999841 11233344444 467999999753 111 223456689888777766632
Q ss_pred Hc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH--
Q psy16243 321 EM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR-- 396 (782)
Q Consensus 321 ~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~-- 396 (782)
.| ++--.+|++||.+..-. .|.+ ..|+.||..-+.+-.
T Consensus 173 ~M~~r~~G~IvnigS~ag~~p---------------------------------~p~~-----s~ysasK~~v~~~S~~L 214 (312)
T KOG1014|consen 173 GMVERKKGIIVNIGSFAGLIP---------------------------------TPLL-----SVYSASKAFVDFFSRCL 214 (312)
T ss_pred hhhcCCCceEEEecccccccc---------------------------------ChhH-----HHHHHHHHHHHHHHHHH
Confidence 11 23456888888753211 1111 689999986555433
Q ss_pred --Hc-CCCCcEEEecCCeEEecc
Q psy16243 397 --RG-GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 397 --~~-~~glp~~IvRp~~v~G~~ 416 (782)
++ ..|+-+-.+-|..|.+..
T Consensus 215 ~~Ey~~~gI~Vq~v~p~~VaTkm 237 (312)
T KOG1014|consen 215 QKEYESKGIFVQSVIPYLVATKM 237 (312)
T ss_pred HHHHHhcCeEEEEeehhheeccc
Confidence 33 458888888888888653
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.15 Score=50.53 Aligned_cols=99 Identities=18% Similarity=0.211 Sum_probs=63.9
Q ss_pred eeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCccc
Q psy16243 176 MVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHY 255 (782)
Q Consensus 176 ~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~ 255 (782)
+++||| |+|+.++..+.|... +.+|.+..|... .. +.+.... +.
T Consensus 2 ~vlVtG-----GtG~gg~la~~L~~~---------------G~~V~v~~R~~~--~~-~~l~~~l------------~~- 45 (177)
T PRK08309 2 HALVIG-----GTGMLKRVSLWLCEK---------------GFHVSVIARREV--KL-ENVKRES------------TT- 45 (177)
T ss_pred EEEEEC-----cCHHHHHHHHHHHHC---------------cCEEEEEECCHH--HH-HHHHHHh------------hc-
Confidence 589999 677766555555432 567888877532 11 1121111 11
Q ss_pred ccceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCc--
Q psy16243 256 LSKMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLK-- 326 (782)
Q Consensus 256 ~~kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~-- 326 (782)
..++.++.+|++++ +++..++++ +|++|+. +++.++.++.++|++. +++
T Consensus 46 ~~~i~~~~~Dv~d~------~sv~~~i~~~l~~~g~id~lv~~---------------vh~~~~~~~~~~~~~~-gv~~~ 103 (177)
T PRK08309 46 PESITPLPLDYHDD------DALKLAIKSTIEKNGPFDLAVAW---------------IHSSAKDALSVVCREL-DGSSE 103 (177)
T ss_pred CCcEEEEEccCCCH------HHHHHHHHHHHHHcCCCeEEEEe---------------ccccchhhHHHHHHHH-ccCCC
Confidence 23678899999998 777766653 3556554 3455789999999998 788
Q ss_pred --eEEEEe
Q psy16243 327 --SFVHVS 332 (782)
Q Consensus 327 --~fV~vS 332 (782)
+|+|+=
T Consensus 104 ~~~~~h~~ 111 (177)
T PRK08309 104 TYRLFHVL 111 (177)
T ss_pred CceEEEEe
Confidence 888864
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.037 Score=61.06 Aligned_cols=106 Identities=16% Similarity=0.006 Sum_probs=64.6
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccc------------------ccccccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS------------------LNSCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~------------------~~~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
.++..+.||+..++. +. .....+++|||+||. .++.-+.+.++..+.++|||+||+...
T Consensus 69 ~~~~~~~~Di~d~~~-l~--~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vy 145 (348)
T PRK15181 69 SRFIFIQGDIRKFTD-CQ--KACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTY 145 (348)
T ss_pred CceEEEEccCCCHHH-HH--HHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhh
Confidence 457788999987643 21 223358999999984 112223333333357899999997544
Q ss_pred CCCC---CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHh--cCCCCeEEEeCCCcc
Q psy16243 77 CRQP---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR--GGAGMPVAMVRPSID 151 (782)
Q Consensus 77 ~~~~---~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~--~~~~~~~~ivRps~~ 151 (782)
+... ..+|... .-.+.|..+|...|.++.. ...+.+.+++||..+
T Consensus 146 g~~~~~~~~e~~~~------------------------------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~v 195 (348)
T PRK15181 146 GDHPDLPKIEERIG------------------------------RPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNV 195 (348)
T ss_pred CCCCCCCCCCCCCC------------------------------CCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecce
Confidence 3211 1111100 0013488999999998765 233678899999887
Q ss_pred cc
Q psy16243 152 LG 153 (782)
Q Consensus 152 ~~ 153 (782)
.+
T Consensus 196 yG 197 (348)
T PRK15181 196 FG 197 (348)
T ss_pred eC
Confidence 65
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.12 Score=56.21 Aligned_cols=113 Identities=17% Similarity=0.069 Sum_probs=73.7
Q ss_pred HhHHHHhcCceEEEEcCcccCc-hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceeccCCCcccccccCCCCCh
Q psy16243 276 EDRQTLVDNIHVVFHCAATVRF-DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNP 354 (782)
Q Consensus 276 ~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~ 354 (782)
.++.+.++++|+|||+|+...- ..+..+.+..|+..++++++.+++. +..++|+++|-=+.+....+...
T Consensus 78 ~d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSNPvD~~~~i~t~~-------- 148 (323)
T PLN00106 78 DQLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISNPVNSTVPIAAEV-------- 148 (323)
T ss_pred CCHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCCccccHHHHHHH--------
Confidence 4566788999999999998543 4567788999999999999999998 78899998884332211111100
Q ss_pred hHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecCCeEEec
Q psy16243 355 NHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 355 ~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp~~v~G~ 415 (782)
+.+.++. +....||.++.-.+++-... ..+++..-+.- .|+|.
T Consensus 149 --------------~~~~s~~---p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~-~ViGe 193 (323)
T PLN00106 149 --------------LKKAGVY---DPKKLFGVTTLDVVRANTFVAEKKGLDPADVDV-PVVGG 193 (323)
T ss_pred --------------HHHcCCC---CcceEEEEecchHHHHHHHHHHHhCCChhheEE-EEEEe
Confidence 0011110 11267888888888876655 33666555544 44443
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.21 Score=54.27 Aligned_cols=61 Identities=15% Similarity=0.133 Sum_probs=50.2
Q ss_pred hHHHHhcCceEEEEcCcccCc-hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceecc
Q psy16243 277 DRQTLVDNIHVVFHCAATVRF-DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNC 338 (782)
Q Consensus 277 ~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~ 338 (782)
++.+.++++|+|+|+|+...- ..+..+.+..|+.+++++++.+++. +++++|+++|--+..
T Consensus 69 ~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv 130 (321)
T PTZ00325 69 LWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNS 130 (321)
T ss_pred chHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHH
Confidence 434677899999999998543 3556778999999999999999998 899999999975543
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.038 Score=57.82 Aligned_cols=137 Identities=21% Similarity=0.133 Sum_probs=81.8
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccc------------------ccccccccccCCCCC-CeEEEEeccccc
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS------------------LNSCLPGERLDHYTT-ESFVHVSTAYSN 76 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~------------------~~~~~~~~~~~~~~l-~~f~hvsta~~~ 76 (782)
...-+.|||+...+ +.+-.+...+++|+|+||- .|+.-+.+..+.... -+|+||||.=.-
T Consensus 52 ~~~fv~~DI~D~~~-v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVY 130 (340)
T COG1088 52 RYRFVQGDICDREL-VDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVY 130 (340)
T ss_pred CceEEeccccCHHH-HHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecccccc
Confidence 56788999987655 3221333359999999993 444445555552111 489999997666
Q ss_pred CCCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHh--cCCCCeEEEeCCCccccc
Q psy16243 77 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR--GGAGMPVAMVRPSIDLGI 154 (782)
Q Consensus 77 ~~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~--~~~~~~~~ivRps~~~~~ 154 (782)
++...-++.|-+. --+.--|.|.-+|+-.+.|++. ..-++|+++.|.++..+.
T Consensus 131 G~l~~~~~~FtE~-------------------------tp~~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGP 185 (340)
T COG1088 131 GDLGLDDDAFTET-------------------------TPYNPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGP 185 (340)
T ss_pred ccccCCCCCcccC-------------------------CCCCCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCC
Confidence 5544222211111 0111113488889888888776 355789999999999875
Q ss_pred cccccccccccc--ccCcccCCCeeEeecc
Q psy16243 155 LFYSEQFFDPMR--KRCPHYLSKMVAVTGD 182 (782)
Q Consensus 155 ~~~~~~~f~~l~--~~~p~~~~k~vlvTG~ 182 (782)
.++.+++- .......++.+.|=|+
T Consensus 186 ----yqfpEKlIP~~I~nal~g~~lpvYGd 211 (340)
T COG1088 186 ----YQFPEKLIPLMIINALLGKPLPVYGD 211 (340)
T ss_pred ----CcCchhhhHHHHHHHHcCCCCceecC
Confidence 12222221 0112245777788884
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.091 Score=57.70 Aligned_cols=94 Identities=20% Similarity=0.314 Sum_probs=63.5
Q ss_pred ccchhhHHHHHHHHHhcCCCCeEEEeCCCccccc-ccccccccccccccCcccC-CCeeEeeccccCCCCCCChhhHHhh
Q psy16243 121 NTYALTKQVAEDMVRRGGAGMPVAMVRPSIDLGI-LFYSEQFFDPMRKRCPHYL-SKMVAVTGDCLKPGVGINSEDRQTL 198 (782)
Q Consensus 121 nt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~~~~-~~~~~~~f~~l~~~~p~~~-~k~vlvTG~~~~~g~Gl~~~~~~~L 198 (782)
.|+++|+++++.|+++.....+++++|....... +.+... ++...-...... .++.++.||+..+.+|+..+.++.+
T Consensus 7 atG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~~~~~ 85 (367)
T TIGR01746 7 ATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREA-LRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAEWERL 85 (367)
T ss_pred cchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHH-HHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHHHHHH
Confidence 3689999999999987433468889997653211 000000 000000001111 5789999999999999998888999
Q ss_pred hccceeEEeeceeeeec
Q psy16243 199 VDNIHVVFHCAATVRFD 215 (782)
Q Consensus 199 ~~~v~iv~hlaa~v~~~ 215 (782)
..++++|+|+|+.+++.
T Consensus 86 ~~~~d~vih~a~~~~~~ 102 (367)
T TIGR01746 86 AENVDTIVHNGALVNWV 102 (367)
T ss_pred HhhCCEEEeCCcEeccC
Confidence 99999999999987643
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.49 Score=46.45 Aligned_cols=125 Identities=17% Similarity=0.128 Sum_probs=66.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|.++ ...|.. .+.+|++..|... ...+..+++..
T Consensus 14 l~gk~~lVTGa~~GIG~ai----a~~l~~---------------~G~~V~l~~r~~~--~~~~~~~~l~~---------- 62 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNT----ALLLAK---------------QGAKVIVTDIDQE--SGQATVEEITN---------- 62 (169)
T ss_pred cCCCEEEEecCCChHHHHH----HHHHHH---------------CCCEEEEEECCHH--HHHHHHHHHHh----------
Confidence 4578999999654444333 233322 1467777777532 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh-------cCceEEEEcCcccCc----hh-hHHHHHHhhHHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV-------DNIHVVFHCAATVRF----DA-HLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~-------~~vdiViH~Aa~v~f----~~-~~~~~~~~Nv~gt~~Lle~a 319 (782)
...++.++..|+++. +++.+++ ..+|+++|+||.... .. +.+.....|+.++......+
T Consensus 63 ---~~~~~~~~~~Dl~~~------~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (169)
T PRK06720 63 ---LGGEALFVSYDMEKQ------GDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQL 133 (169)
T ss_pred ---cCCcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHH
Confidence 012456789999887 5655543 357999999986432 22 21122234555543333332
Q ss_pred ----HHc------cCCceEEEEeccee
Q psy16243 320 ----KEM------KQLKSFVHVSTAYS 336 (782)
Q Consensus 320 ----~~~------~~~~~fV~vST~~v 336 (782)
.+. ....+|..|||.++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (169)
T PRK06720 134 TSSFMKQQEEVVLSDLPIFGIIGTKGQ 160 (169)
T ss_pred HHHHHhcCCEEEeecCceeeEeccccc
Confidence 111 13568888888754
|
|
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=93.45 E-value=0.053 Score=56.27 Aligned_cols=111 Identities=26% Similarity=0.196 Sum_probs=71.0
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccc------------------ccccccccccC-CCCCCeEEEEeccccc
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS------------------LNSCLPGERLD-HYTTESFVHVSTAYSN 76 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~------------------~~~~~~~~~~~-~~~l~~f~hvsta~~~ 76 (782)
.-.-+.||+......+.. -....+++|||+||- .++-.+-+... -.++++||||||.-.-
T Consensus 58 ~ykfv~~di~~~~~~~~~-~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVY 136 (331)
T KOG0747|consen 58 NYKFVEGDIADADLVLYL-FETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVY 136 (331)
T ss_pred CceEeeccccchHHHHhh-hccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEeccccee
Confidence 346788998777665544 223368999999995 33333434444 3389999999997665
Q ss_pred CCCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCC-ccchhhHHHHHHHHHh--cCCCCeEEEeCCCcccc
Q psy16243 77 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWP-NTYALTKQVAEDMVRR--GGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 77 ~~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~P-nt~~l~k~L~E~Ll~~--~~~~~~~~ivRps~~~~ 153 (782)
++... +=.+ + .... .+| |.|+-+|+.+|.+++. .+-+.|++++|...+.+
T Consensus 137 Gds~~---~~~~------~--------E~s~----------~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYG 189 (331)
T KOG0747|consen 137 GDSDE---DAVV------G--------EASL----------LNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYG 189 (331)
T ss_pred cCccc---cccc------c--------cccc----------CCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccC
Confidence 54220 0000 0 0000 112 2488899999999887 46678999999998877
Q ss_pred c
Q psy16243 154 I 154 (782)
Q Consensus 154 ~ 154 (782)
.
T Consensus 190 P 190 (331)
T KOG0747|consen 190 P 190 (331)
T ss_pred C
Confidence 5
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.18 Score=55.27 Aligned_cols=114 Identities=15% Similarity=0.023 Sum_probs=70.6
Q ss_pred ccccceeeecCcCccCCCCCCccccCceeEEEecccc------------------ccccccccccCCCCCCeEEEEeccc
Q psy16243 13 RFEEIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS------------------LNSCLPGERLDHYTTESFVHVSTAY 74 (782)
Q Consensus 13 ~~~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~------------------~~~~~~~~~~~~~~l~~f~hvsta~ 74 (782)
.-..++.+.||+..... +.. -...+ .|+||||+ .|++..-+.+...+.++|+|.||++
T Consensus 53 ~~~~v~~~~~D~~~~~~-i~~--a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~ 128 (361)
T KOG1430|consen 53 RSGRVTVILGDLLDANS-ISN--AFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAY 128 (361)
T ss_pred cCCceeEEecchhhhhh-hhh--hccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCce
Confidence 46678888888765544 322 22246 88888886 2222222333344689999999999
Q ss_pred ccCCCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcC--CCCeEEEeCCCccc
Q psy16243 75 SNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRPSIDL 152 (782)
Q Consensus 75 ~~~~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~--~~~~~~ivRps~~~ 152 (782)
+.-+.. +++....+- . .| ..++..|.-+|+++|+++...+ ...-++.+||..+.
T Consensus 129 Vvf~g~----~~~n~~E~~----------p-------~p---~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IY 184 (361)
T KOG1430|consen 129 VVFGGE----PIINGDESL----------P-------YP---LKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIY 184 (361)
T ss_pred EEeCCe----ecccCCCCC----------C-------Cc---cccccccchHHHHHHHHHHHhcCCCCeeEEEEcccccc
Confidence 966432 222211100 0 01 2344558899999999988743 45678899999887
Q ss_pred cc
Q psy16243 153 GI 154 (782)
Q Consensus 153 ~~ 154 (782)
+.
T Consensus 185 Gp 186 (361)
T KOG1430|consen 185 GP 186 (361)
T ss_pred CC
Confidence 63
|
|
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=91.89 E-value=0.17 Score=48.59 Aligned_cols=75 Identities=16% Similarity=0.267 Sum_probs=50.7
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCccc------Cch-------hhHHHHHHhhHHHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATV------RFD-------AHLKVAVSINLRATKALL 316 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v------~f~-------~~~~~~~~~Nv~gt~~Ll 316 (782)
.++.|...|++.+ ++....+. ..|+.++||+.. ++. ++....+++|+.||.|++
T Consensus 55 ~~~vf~padvtse------kdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvi 128 (260)
T KOG1199|consen 55 GKVVFTPADVTSE------KDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVI 128 (260)
T ss_pred CceEEeccccCcH------HHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeee
Confidence 4889999999976 66665554 469999999862 222 334456789999999999
Q ss_pred HHHH-Hc------cCCceEEEEecceec
Q psy16243 317 EMAK-EM------KQLKSFVHVSTAYSN 337 (782)
Q Consensus 317 e~a~-~~------~~~~~fV~vST~~v~ 337 (782)
++.. .+ .+-+|=|.+-|++|.
T Consensus 129 rl~aglmg~nepdq~gqrgviintasva 156 (260)
T KOG1199|consen 129 RLGAGLMGENEPDQNGQRGVIINTASVA 156 (260)
T ss_pred eehhhhhcCCCCCCCCcceEEEeeceee
Confidence 8743 22 123455566666554
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=91.21 E-value=0.15 Score=56.13 Aligned_cols=113 Identities=12% Similarity=0.105 Sum_probs=65.8
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccc-------------ccccccccccCCCCCCeEEEEeccccc-C--CC
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS-------------LNSCLPGERLDHYTTESFVHVSTAYSN-C--RQ 79 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~-------------~~~~~~~~~~~~~~l~~f~hvsta~~~-~--~~ 79 (782)
++.++.||+..++. +. .....+++|||+|+. .++..+.+.+...+.++|||+||..+- + ..
T Consensus 61 ~~~~~~~Dl~d~~~-~~--~~~~~~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~ 137 (342)
T PLN02214 61 RLILCKADLQDYEA-LK--AAIDGCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNR 137 (342)
T ss_pred cEEEEecCcCChHH-HH--HHHhcCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCC
Confidence 46788899877643 21 223358999999985 223333333333457899999995321 1 11
Q ss_pred ---CCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCccccc
Q psy16243 80 ---PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLGI 154 (782)
Q Consensus 80 ---~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~~ 154 (782)
..++|+-.. ..+ . + ..-.+.|..+|...|.+.... ..+.+++++||..+.+.
T Consensus 138 ~~~~~~~E~~~~-~~~--~-----------------~---~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp 194 (342)
T PLN02214 138 DPEAVVDESCWS-DLD--F-----------------C---KNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGP 194 (342)
T ss_pred CCCcccCcccCC-Chh--h-----------------c---cccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECC
Confidence 112332110 000 0 0 001134899999999998752 33678899999988763
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=90.92 E-value=0.26 Score=53.53 Aligned_cols=113 Identities=17% Similarity=0.165 Sum_probs=64.2
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccccc-----------------ccccccccC-CCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN-----------------SCLPGERLD-HYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~-----------------~~~~~~~~~-~~~l~~f~hvsta~~~ 76 (782)
.+++++.||+..++. +. .....+++|||+|+... +..+.+.+. ..+.++|||+||..+.
T Consensus 56 ~~~~~~~~Dl~~~~~-~~--~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~ 132 (322)
T PLN02986 56 ERLKLFKADLLEESS-FE--QAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAV 132 (322)
T ss_pred CceEEEecCCCCcch-HH--HHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhhe
Confidence 357889999987753 21 22334899999998511 011111112 2357899999997553
Q ss_pred C-CC------CCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHh--cCCCCeEEEeC
Q psy16243 77 C-RQ------PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR--GGAGMPVAMVR 147 (782)
Q Consensus 77 ~-~~------~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~--~~~~~~~~ivR 147 (782)
. .. ..++|+-... +. ......+.|..+|...|.+... ...+.+++++|
T Consensus 133 ~~~~~~~~~~~~~~E~~~~~---p~--------------------~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lr 189 (322)
T PLN02986 133 LFRQPPIEANDVVDETFFSD---PS--------------------LCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLN 189 (322)
T ss_pred ecCCccCCCCCCcCcccCCC---hH--------------------HhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEc
Confidence 2 11 1122221110 00 0001124599999999988765 22357888999
Q ss_pred CCcccc
Q psy16243 148 PSIDLG 153 (782)
Q Consensus 148 ps~~~~ 153 (782)
|..+.+
T Consensus 190 p~~v~G 195 (322)
T PLN02986 190 PGFICG 195 (322)
T ss_pred ccceeC
Confidence 998765
|
|
| >PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups [] | Back alignment and domain information |
|---|
Probab=89.69 E-value=0.24 Score=40.12 Aligned_cols=51 Identities=16% Similarity=0.206 Sum_probs=42.4
Q ss_pred CCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHH
Q psy16243 78 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQ 128 (782)
Q Consensus 78 ~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~ 128 (782)
.+...+.++++.|+||..+++++..+.+...-.+.+..++.+||...+.++
T Consensus 16 ~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~i~~~~~~~~~ti~~l~~~ 66 (67)
T PF00550_consen 16 EEIDPDTDFFDLGLDSLDAIELVSELEEEFGIKIPPSDLFEHPTIRDLAEY 66 (67)
T ss_dssp GCTSTTSBTTTTTSSHHHHHHHHHHHHHHHTSSTTHHHHCTSSSHHHHHHH
T ss_pred hhCCCCCCHHHhCCchHHHHHHHHHHHHHHcCCCCHHHHHcCCCHHHHHhH
Confidence 455678999999999999999999999987667777778889988766654
|
The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A .... |
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=89.67 E-value=0.4 Score=52.82 Aligned_cols=114 Identities=11% Similarity=0.090 Sum_probs=63.2
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccccc-----------------ccccccccC-CCCCCeEEEEecccccC
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN-----------------SCLPGERLD-HYTTESFVHVSTAYSNC 77 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~-----------------~~~~~~~~~-~~~l~~f~hvsta~~~~ 77 (782)
+++.+.||+..++. +. .....+++|||||+... +..+.+.+. ..+.++|+|+||+.+..
T Consensus 57 ~~~~v~~Dl~d~~~-~~--~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~ 133 (351)
T PLN02650 57 RLTLWKADLAVEGS-FD--DAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVN 133 (351)
T ss_pred ceEEEEecCCChhh-HH--HHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcc
Confidence 46788999987754 21 23335899999998521 111112221 22257999999985533
Q ss_pred CCC----CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCC-ccchhhHHHHHHHHHhc--CCCCeEEEeCCCc
Q psy16243 78 RQP----IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWP-NTYALTKQVAEDMVRRG--GAGMPVAMVRPSI 150 (782)
Q Consensus 78 ~~~----~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~P-nt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~ 150 (782)
... ..+|+-.. ..+ ..+ + . ..| +.|..+|...|.++... ..+..++++||..
T Consensus 134 ~~~~~~~~~~E~~~~-~~~------~~~-----------~--~-~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~ 192 (351)
T PLN02650 134 VEEHQKPVYDEDCWS-DLD------FCR-----------R--K-KMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTL 192 (351)
T ss_pred cCCCCCCccCcccCC-chh------hhh-----------c--c-ccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 211 11222100 000 000 0 0 011 35999999999988652 2356789999998
Q ss_pred ccc
Q psy16243 151 DLG 153 (782)
Q Consensus 151 ~~~ 153 (782)
+.+
T Consensus 193 v~G 195 (351)
T PLN02650 193 VVG 195 (351)
T ss_pred eEC
Confidence 765
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=89.17 E-value=0.42 Score=62.78 Aligned_cols=96 Identities=20% Similarity=0.167 Sum_probs=67.1
Q ss_pred ccchhhHHHHHHHHHhc--CCCCeEEEeCCCccccc-ccccccccccccccCcccCCCeeEeeccccCCCCCCChhhHHh
Q psy16243 121 NTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLGI-LFYSEQFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQT 197 (782)
Q Consensus 121 nt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~~-~~~~~~~f~~l~~~~p~~~~k~vlvTG~~~~~g~Gl~~~~~~~ 197 (782)
.++++|.++++.|+.+. ....+++++|....... +.+... +.......+.+.+++.++.||+..+.+|+..+.++.
T Consensus 979 atGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~-~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~~ 1057 (1389)
T TIGR03443 979 ATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKT-GTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWSD 1057 (1389)
T ss_pred CccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHH-HHHhCCCchhhhcceEEEeccCCCccCCcCHHHHHH
Confidence 47899999999999875 34678889996543321 100000 000000122344689999999999999999999999
Q ss_pred hhccceeEEeeceeeeeccc
Q psy16243 198 LVDNIHVVFHCAATVRFDAH 217 (782)
Q Consensus 198 L~~~v~iv~hlaa~v~~~~~ 217 (782)
+..++++|+|+|+.+++...
T Consensus 1058 l~~~~d~iiH~Aa~~~~~~~ 1077 (1389)
T TIGR03443 1058 LTNEVDVIIHNGALVHWVYP 1077 (1389)
T ss_pred HHhcCCEEEECCcEecCccC
Confidence 99999999999998765433
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=88.63 E-value=0.34 Score=53.24 Aligned_cols=114 Identities=16% Similarity=0.042 Sum_probs=61.6
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEeccccc------------------cccccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL------------------NSCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~------------------~~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
..+.++.||+..+.-.+. .....+++||||||.. ++..+.+.++..+ ++|+|+||+.+-
T Consensus 46 ~~~~~~~~Dl~~~~~~~~--~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vy 122 (347)
T PRK11908 46 PRMHFFEGDITINKEWIE--YHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVY 122 (347)
T ss_pred CCeEEEeCCCCCCHHHHH--HHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceee
Confidence 357788999873322121 1223589999999841 1122233333223 799999998664
Q ss_pred CCCCC--cceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCccc
Q psy16243 77 CRQPI--IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDL 152 (782)
Q Consensus 77 ~~~~~--ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~ 152 (782)
++... ++|+--+... .| .....|.|..+|...|.++... ..+.+++++|+..+.
T Consensus 123 g~~~~~~~~ee~~~~~~--------------------~~--~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~ 180 (347)
T PRK11908 123 GMCPDEEFDPEASPLVY--------------------GP--INKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWI 180 (347)
T ss_pred ccCCCcCcCcccccccc--------------------Cc--CCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeee
Confidence 43211 1111000000 00 0001134889999999888752 245678888887654
Q ss_pred c
Q psy16243 153 G 153 (782)
Q Consensus 153 ~ 153 (782)
+
T Consensus 181 G 181 (347)
T PRK11908 181 G 181 (347)
T ss_pred C
Confidence 4
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=88.60 E-value=0.31 Score=58.68 Aligned_cols=113 Identities=15% Similarity=0.047 Sum_probs=64.6
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEeccccccc------------------cccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLNS------------------CLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~~------------------~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
.+.+++.||+..+..-+. .....+++||||||..+. ..+.+.++-.+ ++|||+||+...
T Consensus 360 ~~~~~~~gDl~d~~~~l~--~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vy 436 (660)
T PRK08125 360 PRFHFVEGDISIHSEWIE--YHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVY 436 (660)
T ss_pred CceEEEeccccCcHHHHH--HHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhc
Confidence 357888999977543121 123358999999985211 11112222223 799999998765
Q ss_pred CCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCC-ccchhhHHHHHHHHHhc--CCCCeEEEeCCCcc
Q psy16243 77 CRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWP-NTYALTKQVAEDMVRRG--GAGMPVAMVRPSID 151 (782)
Q Consensus 77 ~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~P-nt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~ 151 (782)
+... .++|+--... ..| ...| +.|..+|...|.++... ..+.+++++|+..+
T Consensus 437 g~~~~~~~~E~~~~~~--------------------~~p---~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~v 493 (660)
T PRK08125 437 GMCTDKYFDEDTSNLI--------------------VGP---INKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNW 493 (660)
T ss_pred CCCCCCCcCccccccc--------------------cCC---CCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEcee
Confidence 5321 1122210000 000 0112 35999999999998762 23578889998877
Q ss_pred cc
Q psy16243 152 LG 153 (782)
Q Consensus 152 ~~ 153 (782)
.+
T Consensus 494 yG 495 (660)
T PRK08125 494 MG 495 (660)
T ss_pred eC
Confidence 65
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=88.10 E-value=0.57 Score=50.65 Aligned_cols=112 Identities=12% Similarity=0.152 Sum_probs=62.7
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccccc-----------------ccccccccC-CCCCCeEEEEeccccc-
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN-----------------SCLPGERLD-HYTTESFVHVSTAYSN- 76 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~-----------------~~~~~~~~~-~~~l~~f~hvsta~~~- 76 (782)
+++.+.||+..++. +. .....+++|||+|+... +..+.+.+. ..+.++|+|+||+.+.
T Consensus 56 ~~~~~~~Dl~~~~~-~~--~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~ 132 (322)
T PLN02662 56 RLHLFKANLLEEGS-FD--SVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVA 132 (322)
T ss_pred ceEEEeccccCcch-HH--HHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhc
Confidence 56789999988753 21 22335899999998411 011111111 1256899999996531
Q ss_pred -CCCC-----CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHh--cCCCCeEEEeCC
Q psy16243 77 -CRQP-----IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR--GGAGMPVAMVRP 148 (782)
Q Consensus 77 -~~~~-----~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~--~~~~~~~~ivRp 148 (782)
.+.. .++|+-... |......++.|..+|.+.|.+... ...+.+++++||
T Consensus 133 y~~~~~~~~~~~~E~~~~~-----------------------p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp 189 (322)
T PLN02662 133 YNGKPLTPDVVVDETWFSD-----------------------PAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINP 189 (322)
T ss_pred CCCcCCCCCCcCCcccCCC-----------------------hhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeC
Confidence 1111 122221000 000001123488999999998764 223578899999
Q ss_pred Ccccc
Q psy16243 149 SIDLG 153 (782)
Q Consensus 149 s~~~~ 153 (782)
..+.+
T Consensus 190 ~~v~G 194 (322)
T PLN02662 190 AMVIG 194 (322)
T ss_pred CcccC
Confidence 88765
|
|
| >PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.75 E-value=2.3 Score=51.94 Aligned_cols=81 Identities=15% Similarity=0.156 Sum_probs=49.2
Q ss_pred HHHHhhcCceeeeccCCCccccccchhHHHHHHHHh-hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCC
Q psy16243 453 IVAGAGLGLLRSMHADPELVADMVPADNVINCIISA-AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQK 531 (782)
Q Consensus 453 ~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~ 531 (782)
+..+...|.++.+|..-......+|+|...++.+.+ .+.....-... .+.....--++.+..+
T Consensus 236 ~~~~~a~g~~~~~p~~~~~p~~~~p~d~a~~~a~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~ 299 (1108)
T PTZ00374 236 VCLGVALGTVKHLPVGFRDPATVTPLDVALNTALLAVLLLCHGGLAEC----------------VECAAEMQLCGAPGDN 299 (1108)
T ss_pred HHHHHhhhhhhcccccCCCCceeccHHHHHHHHHHHHHHHhcCChHHH----------------hcchhhheeccCCccc
Confidence 445667888888876655667789999877664433 32211000000 0112233345555668
Q ss_pred cccHHHHHHHHHhccccc
Q psy16243 532 PIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 532 ~~t~~el~~~i~~~~~~~ 549 (782)
..-|+-+.+++..++|+.
T Consensus 300 ~~vwgm~~~ylm~yy~r~ 317 (1108)
T PTZ00374 300 SLVWGMVAEYLMDYYGRF 317 (1108)
T ss_pred eeeHHHHHHHHHHHHhhh
Confidence 899999999999988754
|
|
| >KOG1178|consensus | Back alignment and domain information |
|---|
Probab=87.67 E-value=0.39 Score=59.19 Aligned_cols=221 Identities=12% Similarity=0.034 Sum_probs=124.1
Q ss_pred CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCCe-EE-EeCCCccccccccc
Q psy16243 81 IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMP-VA-MVRPSIDLGILFYS 158 (782)
Q Consensus 81 ~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~~-~~-ivRps~~~~~~~~~ 158 (782)
..+.+||+.|.||..+.++...|+...-......+....+++-.+.+.+++.-......... .. ..++ ......+.
T Consensus 617 s~d~~fF~lGgdSi~av~~~~~lr~~~~v~~~~~l~~~l~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 694 (1032)
T KOG1178|consen 617 SPDSSFFQLGGDSISAVRLSGLLRKKGYVEGPLGLIFKLLTIVNLESGIIRIKSQEKSSSKLNHKIELKN--LKDRTQLS 694 (1032)
T ss_pred CCCcchhhhcchhHHHHHHHHhhhhhheeccccccccchhhHHHHHHHHhhhhhhccchhhhhhhhhhcc--ccchhhHh
Confidence 44668999999999999999988887543334444444444443333333221111000000 00 0011 00000000
Q ss_pred ccc--cccccccCccc----CCCe--eEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchh
Q psy16243 159 EQF--FDPMRKRCPHY----LSKM--VAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATK 230 (782)
Q Consensus 159 ~~~--f~~l~~~~p~~----~~k~--vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~ 230 (782)
.-+ -.+++.....+ ..++ ++++|..++.+--. -....+. .++.....+.+++|..+.+
T Consensus 695 ~~i~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~-----l~~~~~~---------~~~~~~i~~~~~~~a~~e~ 760 (1032)
T KOG1178|consen 695 DTIPKSSPLPLNLSIEVKKSELLTAYVFLTGYTGYLGRRK-----LSNLVKL---------SNFFYIILVFALVRASSEE 760 (1032)
T ss_pred hhccccccCCCCCccccccccccccceeeeeccceehhhh-----hhhhhhh---------hhhhheeeeEEEeccCCch
Confidence 000 00011100001 1111 68888544444222 1111111 1222344567788877655
Q ss_pred hHHHHHHHhhcccccccccccCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHH
Q psy16243 231 ALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLR 310 (782)
Q Consensus 231 ~~~erl~~~~~~~~f~~l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~ 310 (782)
....+.+.... .+... .++...++..+.+++....+|+....+..+.+.++.++|.++.++...+..+....|+.
T Consensus 761 a~~~~~~~~i~--~~~~~---~e~~~i~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~v~~~t~~~~~~~~ 835 (1032)
T KOG1178|consen 761 ASGGRLQDAIQ--IYGVL---NEELLINIIVHLIDLSKSLFGLEDTLWNKLQEPVSIVIHNGALVHEVLRYTELRYPNVI 835 (1032)
T ss_pred hhccchhchhh--hhhhc---cccccceeeeehhhhhhhhhcccchhhhccccCcceecccccceeeechhhccCCceee
Confidence 55455443322 22222 23445688889999999999999999999999999999999998887888888889999
Q ss_pred HHHHHHHHHHHc
Q psy16243 311 ATKALLEMAKEM 322 (782)
Q Consensus 311 gt~~Lle~a~~~ 322 (782)
+|.+.++.+...
T Consensus 836 ~~~~~~~l~~~l 847 (1032)
T KOG1178|consen 836 GTITVLPLYSFL 847 (1032)
T ss_pred eeeeeeeeeccc
Confidence 999999887764
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=87.65 E-value=0.34 Score=53.34 Aligned_cols=32 Identities=25% Similarity=0.472 Sum_probs=23.5
Q ss_pred cchhhHHHHHHHHHh--cCCCCeEEEeCCCcccc
Q psy16243 122 TYALTKQVAEDMVRR--GGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 122 t~~l~k~L~E~Ll~~--~~~~~~~~ivRps~~~~ 153 (782)
.|..+|..+|.++.. ...+.+.+++||..+.+
T Consensus 159 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~G 192 (355)
T PRK10217 159 PYSASKASSDHLVRAWLRTYGLPTLITNCSNNYG 192 (355)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeC
Confidence 488899999988865 23356778888887654
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=87.41 E-value=0.81 Score=50.04 Aligned_cols=114 Identities=11% Similarity=0.045 Sum_probs=64.1
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccccc-----------------ccccccccC-CCCCCeEEEEecccccC
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN-----------------SCLPGERLD-HYTTESFVHVSTAYSNC 77 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~-----------------~~~~~~~~~-~~~l~~f~hvsta~~~~ 77 (782)
+++++.||+..++. +. .....+++|||+|+... +..+.+.+. ..+.++|+|+||+-+..
T Consensus 60 ~~~~~~~Dl~d~~~-~~--~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g 136 (338)
T PLN00198 60 DLKIFGADLTDEES-FE--APIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVS 136 (338)
T ss_pred ceEEEEcCCCChHH-HH--HHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeee
Confidence 57889999987643 11 12235899999998411 111122222 22468999999975543
Q ss_pred CC------CCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCC-ccchhhHHHHHHHHHh--cCCCCeEEEeCC
Q psy16243 78 RQ------PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWP-NTYALTKQVAEDMVRR--GGAGMPVAMVRP 148 (782)
Q Consensus 78 ~~------~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~P-nt~~l~k~L~E~Ll~~--~~~~~~~~ivRp 148 (782)
.. ..++|+-. +.... +.+ . ..| +.|..+|...|.+... ...+.+++++||
T Consensus 137 ~~~~~~~~~~~~E~~~----~~~~~--~~~---------~------~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~ 195 (338)
T PLN00198 137 INKLSGTGLVMNEKNW----TDVEF--LTS---------E------KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIP 195 (338)
T ss_pred ccCCCCCCceeccccC----Cchhh--hhh---------c------CCccchhHHHHHHHHHHHHHHHHhcCceEEEEeC
Confidence 21 11233211 00000 000 0 012 2399999999998775 223578889999
Q ss_pred Ccccc
Q psy16243 149 SIDLG 153 (782)
Q Consensus 149 s~~~~ 153 (782)
..+.+
T Consensus 196 ~~vyG 200 (338)
T PLN00198 196 TLMAG 200 (338)
T ss_pred CceEC
Confidence 88865
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=86.96 E-value=0.24 Score=52.64 Aligned_cols=94 Identities=22% Similarity=0.081 Sum_probs=52.1
Q ss_pred ceeeecCcCccCCCCCCccccCceeEEEecccc------------------ccccccccccCCCCCCeEEEEecccccCC
Q psy16243 17 IFEGEGLSGILSLGLNLNQKSGPISASKNSTAS------------------LNSCLPGERLDHYTTESFVHVSTAYSNCR 78 (782)
Q Consensus 17 ~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~------------------~~~~~~~~~~~~~~l~~f~hvsta~~~~~ 78 (782)
+..+.||+...+. +..-.+...+++|+|+||- .|+.-+++.....+.++|++|||..+.-+
T Consensus 56 ~~~vigDvrd~~~-l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~P 134 (293)
T PF02719_consen 56 IVPVIGDVRDKER-LNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNP 134 (293)
T ss_dssp EE--CTSCCHHHH-HHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS-
T ss_pred cCceeecccCHHH-HHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCC
Confidence 3567999877744 2221233359999999996 44444444444446899999999877332
Q ss_pred CCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcC-----CCCeEEEeCCCccc
Q psy16243 79 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG-----AGMPVAMVRPSIDL 152 (782)
Q Consensus 79 ~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~-----~~~~~~ivRps~~~ 152 (782)
- |++..+|.+.|.++.... ....++.+|=-++.
T Consensus 135 t-----------------------------------------nvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVl 172 (293)
T PF02719_consen 135 T-----------------------------------------NVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVL 172 (293)
T ss_dssp ------------------------------------------SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EET
T ss_pred C-----------------------------------------cHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeccee
Confidence 1 247788999999988632 23466777755443
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=86.49 E-value=0.54 Score=51.03 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=62.8
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccccc------------------ccccccccC-CCCCCeEEEEeccccc
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN------------------SCLPGERLD-HYTTESFVHVSTAYSN 76 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~------------------~~~~~~~~~-~~~l~~f~hvsta~~~ 76 (782)
+.+.+.||+..++. +. .....+++|||||+... +..+.+.+. ..+.++||++||..+.
T Consensus 57 ~~~~~~~D~~d~~~-~~--~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~ 133 (325)
T PLN02989 57 RLKLFKADLLDEGS-FE--LAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAV 133 (325)
T ss_pred ceEEEeCCCCCchH-HH--HHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhhe
Confidence 56788999987753 11 22334899999998511 111112111 1235799999997543
Q ss_pred CCC-------CCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHh--cCCCCeEEEeC
Q psy16243 77 CRQ-------PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR--GGAGMPVAMVR 147 (782)
Q Consensus 77 ~~~-------~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~--~~~~~~~~ivR 147 (782)
... ..++|+-.. ++ .....-.+.|..+|...|.++.. ...+.+++++|
T Consensus 134 ~~~~~~~~~~~~~~E~~~~---~p--------------------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR 190 (325)
T PLN02989 134 LAPETKLGPNDVVDETFFT---NP--------------------SFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLN 190 (325)
T ss_pred ecCCccCCCCCccCcCCCC---ch--------------------hHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEc
Confidence 221 112222110 00 00000124599999999988765 22357888999
Q ss_pred CCcccc
Q psy16243 148 PSIDLG 153 (782)
Q Consensus 148 ps~~~~ 153 (782)
|..+.+
T Consensus 191 ~~~vyG 196 (325)
T PLN02989 191 PGLVTG 196 (325)
T ss_pred CCceeC
Confidence 998765
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=85.42 E-value=0.88 Score=48.96 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=24.2
Q ss_pred ccchhhHHHHHHHHHhc--CCCCeEEEeCCCcccc
Q psy16243 121 NTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 121 nt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~ 153 (782)
+.|..+|...|.+++.. ..+.+++++|+..+.+
T Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG 172 (308)
T PRK11150 138 NVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYG 172 (308)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecC
Confidence 34889999999887752 2356788889877654
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=85.37 E-value=0.99 Score=48.53 Aligned_cols=31 Identities=23% Similarity=0.202 Sum_probs=23.5
Q ss_pred ccchhhHHHHHHHHHhcCCCCeEEEeCCCcccc
Q psy16243 121 NTYALTKQVAEDMVRRGGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 121 nt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~~~ 153 (782)
|.|..+|...|.++.... ..++++|+..+.+
T Consensus 126 ~~Yg~sK~~~E~~~~~~~--~~~~ilR~~~vyG 156 (299)
T PRK09987 126 NVYGETKLAGEKALQEHC--AKHLIFRTSWVYA 156 (299)
T ss_pred CHHHHHHHHHHHHHHHhC--CCEEEEecceecC
Confidence 348899999999987632 3568999887754
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=85.01 E-value=0.88 Score=50.84 Aligned_cols=33 Identities=30% Similarity=0.460 Sum_probs=26.2
Q ss_pred ccchhhHHHHHHHHHhc--CCCCeEEEeCCCcccc
Q psy16243 121 NTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 121 nt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~ 153 (782)
+.|..+|...|.++... ..+.+++++||..+.+
T Consensus 180 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyG 214 (386)
T PLN02427 180 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIG 214 (386)
T ss_pred cchHHHHHHHHHHHHHHHhhcCCceEEecccceeC
Confidence 46999999999998752 2367889999988865
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=83.40 E-value=0.89 Score=48.74 Aligned_cols=108 Identities=21% Similarity=0.177 Sum_probs=60.1
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEeccccc------------------cccccccccCCCCC-CeEEEEeccccc
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL------------------NSCLPGERLDHYTT-ESFVHVSTAYSN 76 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~------------------~~~~~~~~~~~~~l-~~f~hvsta~~~ 76 (782)
.+.++.||+..++.- ..--+...+++|||||+.. ++..+++.+..... .+++|+||....
T Consensus 51 ~~~~~~~Dl~~~~~~-~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~ 129 (317)
T TIGR01181 51 RYRFVKGDIGDRELV-SRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVY 129 (317)
T ss_pred CcEEEEcCCcCHHHH-HHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeecccee
Confidence 467788999877542 1101111389999999851 11222333332112 379999997664
Q ss_pred CCCCC---cceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCcc
Q psy16243 77 CRQPI---IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSID 151 (782)
Q Consensus 77 ~~~~~---ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~ 151 (782)
+.... .+|+- + ..| -+.|..+|..+|.++... ..+.+++++||..+
T Consensus 130 g~~~~~~~~~e~~------~-----------------~~~------~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i 180 (317)
T TIGR01181 130 GDLEKGDAFTETT------P-----------------LAP------SSPYSASKAASDHLVRAYHRTYGLPALITRCSNN 180 (317)
T ss_pred CCCCCCCCcCCCC------C-----------------CCC------CCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccc
Confidence 43221 11110 0 000 024888899999887642 33567789998876
Q ss_pred cc
Q psy16243 152 LG 153 (782)
Q Consensus 152 ~~ 153 (782)
.+
T Consensus 181 ~G 182 (317)
T TIGR01181 181 YG 182 (317)
T ss_pred cC
Confidence 54
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=83.40 E-value=0.98 Score=49.55 Aligned_cols=107 Identities=15% Similarity=0.004 Sum_probs=59.5
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEeccccc------------------cccccccccCCCCCCeEEEEecccccC
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL------------------NSCLPGERLDHYTTESFVHVSTAYSNC 77 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~------------------~~~~~~~~~~~~~l~~f~hvsta~~~~ 77 (782)
++..+.||+..++. +..--....+++|||||+.. ++..+.+.+...+.++|+|+||+...+
T Consensus 59 ~~~~~~~D~~~~~~-l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (352)
T PLN02240 59 NLVFHKVDLRDKEA-LEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYG 137 (352)
T ss_pred cceEEecCcCCHHH-HHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence 46778899876643 21100011479999999851 112233333333578999999975433
Q ss_pred CC--CCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc---CCCCeEEEeCCCccc
Q psy16243 78 RQ--PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG---GAGMPVAMVRPSIDL 152 (782)
Q Consensus 78 ~~--~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~---~~~~~~~ivRps~~~ 152 (782)
.. ..++|+-. .+ -.+.|..+|...|.+++.. ..+.+.+++|+..+.
T Consensus 138 ~~~~~~~~E~~~---~~--------------------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~ 188 (352)
T PLN02240 138 QPEEVPCTEEFP---LS--------------------------ATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPV 188 (352)
T ss_pred CCCCCCCCCCCC---CC--------------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcC
Confidence 21 11222210 00 0134888999999988642 234566777865443
|
|
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=83.09 E-value=7.3 Score=48.13 Aligned_cols=221 Identities=19% Similarity=0.202 Sum_probs=121.1
Q ss_pred hccCccccCCccchhhHHHHHHHHHh----cCCCCeEEEeCCCcccccccccccccccccccCccc--CCCeeEeecccc
Q psy16243 111 ITPGIVDYWPNTYALTKQVAEDMVRR----GGAGMPVAMVRPSIDLGILFYSEQFFDPMRKRCPHY--LSKMVAVTGDCL 184 (782)
Q Consensus 111 ~~p~li~~~Pnt~~l~k~L~E~Ll~~----~~~~~~~~ivRps~~~~~~~~~~~~f~~l~~~~p~~--~~k~vlvTG~~~ 184 (782)
+....+..-|++-|-++. +|+-.+- +.++.+++-+|+...... ..+-...++..+..+ ..|..+|+|.+|
T Consensus 1703 IksGvV~PL~ttvF~~~q-vE~AFRfMasGKHIGKVvikvr~eE~~k~---~~pk~r~i~AI~rt~~hpeksYii~GGLG 1778 (2376)
T KOG1202|consen 1703 IKSGVVRPLPTTVFHGQQ-VEDAFRFMASGKHIGKVVIKVRAEEPAKA---KGPKPRLISAIPRTYCHPEKSYIIVGGLG 1778 (2376)
T ss_pred hccCceeccccccccHHH-HHHHHHHHhccCccceEEEEEcccccccc---cCCchhhHhhcchhhcCccceEEEecccc
Confidence 334445566777665543 4555442 345667778887766432 000000011111111 268889999444
Q ss_pred CCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHH-HHHHhhcccccccccccCcccccceeEEe
Q psy16243 185 KPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLE-MAKEMKQLKFFDPMRKRCPHYLSKMVAVT 263 (782)
Q Consensus 185 ~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~e-rl~~~~~~~~f~~l~~~~~~~~~kv~~i~ 263 (782)
|+|+ |.-++|+..- ..++.+-.|+ +-++..+ ++-.-. ++ .--+|.+-.
T Consensus 1779 --GFGL--ELaqWLi~RG--------------ar~lVLtSRs-GirtGYQa~~vrrW--------r~----~GVqV~vsT 1827 (2376)
T KOG1202|consen 1779 --GFGL--ELAQWLIQRG--------------ARKLVLTSRS-GIRTGYQALMVRRW--------RR----RGVQVQVST 1827 (2376)
T ss_pred --chhH--HHHHHHHhcC--------------ceEEEEeccc-cchhhHHHHHHHHH--------Hh----cCeEEEEec
Confidence 3333 4456775431 1233333343 2233222 221110 00 012444555
Q ss_pred cCCCCCCCCCCHHhHHHHhcC------ceEEEEcCcccCc----h---hhHHHHHHhhHHHHHHHHHHHHH-ccCCceEE
Q psy16243 264 GDCLKPGVGINSEDRQTLVDN------IHVVFHCAATVRF----D---AHLKVAVSINLRATKALLEMAKE-MKQLKSFV 329 (782)
Q Consensus 264 gDi~~~~lGl~~~~~~~l~~~------vdiViH~Aa~v~f----~---~~~~~~~~~Nv~gt~~Lle~a~~-~~~~~~fV 329 (782)
.|++.. +.-.+++++ |--|||+|+..+- + +..++.-+.-+.||.+|=.+.++ ++-++-||
T Consensus 1828 ~nitt~------~ga~~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv 1901 (2376)
T KOG1202|consen 1828 SNITTA------EGARGLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFV 1901 (2376)
T ss_pred ccchhh------hhHHHHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEE
Confidence 666655 566666664 3569999987542 1 22334555678889988877765 46688999
Q ss_pred EEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-CCCCcEEEe
Q psy16243 330 HVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-GAGMPVAMV 407 (782)
Q Consensus 330 ~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-~~glp~~Iv 407 (782)
-.||.++- |+.+ ...||.+....|+++.+. ..|+|-+.+
T Consensus 1902 ~FSSvscGRGN~G---------------------------------------QtNYG~aNS~MERiceqRr~~GfPG~Ai 1942 (2376)
T KOG1202|consen 1902 VFSSVSCGRGNAG---------------------------------------QTNYGLANSAMERICEQRRHEGFPGTAI 1942 (2376)
T ss_pred EEEeecccCCCCc---------------------------------------ccccchhhHHHHHHHHHhhhcCCCccee
Confidence 99998653 2211 157999999999999887 458875555
Q ss_pred cCCe
Q psy16243 408 RPSI 411 (782)
Q Consensus 408 Rp~~ 411 (782)
-=|.
T Consensus 1943 QWGA 1946 (2376)
T KOG1202|consen 1943 QWGA 1946 (2376)
T ss_pred eeec
Confidence 4433
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=82.70 E-value=2.7 Score=43.34 Aligned_cols=23 Identities=13% Similarity=0.313 Sum_probs=17.5
Q ss_pred HhHHHHhc--CceEEEEcCcccCch
Q psy16243 276 EDRQTLVD--NIHVVFHCAATVRFD 298 (782)
Q Consensus 276 ~~~~~l~~--~vdiViH~Aa~v~f~ 298 (782)
+.+.++++ ++|+|||+||..+|.
T Consensus 77 ~~l~~~~~~~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 77 DKMKSIITHEKVDAVIMAAAGSDWV 101 (229)
T ss_pred HHHHHHhcccCCCEEEECcccccee
Confidence 34556664 579999999998874
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=82.57 E-value=3.1 Score=45.35 Aligned_cols=47 Identities=17% Similarity=0.133 Sum_probs=37.2
Q ss_pred HhHHHHhcCceEEEEcCcccCc-hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 276 EDRQTLVDNIHVVFHCAATVRF-DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 276 ~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.+.++++|+|||+|+...- .++..+.++.|+.-.+.+.+...++
T Consensus 70 ~~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 70 TDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred CCHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455677899999999998654 3556778899999999998877766
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=82.02 E-value=1.4 Score=48.55 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=25.4
Q ss_pred cchhhHHHHHHHHHhc--CCCCeEEEeCCCcccc
Q psy16243 122 TYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 122 t~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~ 153 (782)
.|..+|...|.++... ..+.+.+++|+..+.+
T Consensus 175 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG 208 (353)
T PLN02896 175 VYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAG 208 (353)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccC
Confidence 5999999999988752 2357889999888765
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=81.22 E-value=0.91 Score=49.87 Aligned_cols=33 Identities=24% Similarity=0.431 Sum_probs=23.6
Q ss_pred ccchhhHHHHHHHHHhc--CCCCeEEEeCCCcccc
Q psy16243 121 NTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 121 nt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~ 153 (782)
+.|..+|...|.+++.. ..+.+.+++|+..+.+
T Consensus 165 ~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~G 199 (352)
T PRK10084 165 SPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYG 199 (352)
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeC
Confidence 45899999999888652 2346778888776544
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=80.81 E-value=1.7 Score=46.00 Aligned_cols=56 Identities=30% Similarity=0.399 Sum_probs=35.6
Q ss_pred CeEEEEecccccCCC---CCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCC
Q psy16243 65 ESFVHVSTAYSNCRQ---PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGM 141 (782)
Q Consensus 65 ~~f~hvsta~~~~~~---~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~ 141 (782)
-.+||+||-|.=-.. ...++|.-.+ . |.|..+|.+.|..++..+ .
T Consensus 93 a~lVhiSTDyVFDG~~~~~Y~E~D~~~P-~-----------------------------nvYG~sKl~GE~~v~~~~--~ 140 (281)
T COG1091 93 ARLVHISTDYVFDGEKGGPYKETDTPNP-L-----------------------------NVYGRSKLAGEEAVRAAG--P 140 (281)
T ss_pred CeEEEeecceEecCCCCCCCCCCCCCCC-h-----------------------------hhhhHHHHHHHHHHHHhC--C
Confidence 569999999993322 2334444332 0 248899999999988743 2
Q ss_pred eEEEeCCCccc
Q psy16243 142 PVAMVRPSIDL 152 (782)
Q Consensus 142 ~~~ivRps~~~ 152 (782)
..+++|.+.+.
T Consensus 141 ~~~I~Rtswv~ 151 (281)
T COG1091 141 RHLILRTSWVY 151 (281)
T ss_pred CEEEEEeeeee
Confidence 34566755543
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=80.70 E-value=1.5 Score=46.80 Aligned_cols=31 Identities=23% Similarity=0.190 Sum_probs=22.6
Q ss_pred chhhHHHHHHHHHh--cCCCCeEEEeCCCcccc
Q psy16243 123 YALTKQVAEDMVRR--GGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 123 ~~l~k~L~E~Ll~~--~~~~~~~~ivRps~~~~ 153 (782)
|..+|...|.++.. ...+.+.+++||..+.+
T Consensus 130 Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG 162 (306)
T PLN02725 130 YAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYG 162 (306)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEEecceeC
Confidence 88999999987654 22356778889887654
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=80.22 E-value=2.1 Score=48.81 Aligned_cols=105 Identities=18% Similarity=0.068 Sum_probs=60.7
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEeccccc------------------cccccccccCCCCCCeEEEEecccccC
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL------------------NSCLPGERLDHYTTESFVHVSTAYSNC 77 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~------------------~~~~~~~~~~~~~l~~f~hvsta~~~~ 77 (782)
++..+.||+.++.+ ..+++|||||+.. ++..+.+.++..+ .+|||+||....+
T Consensus 169 ~~~~~~~Di~~~~~--------~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~r~V~~SS~~VYg 239 (436)
T PLN02166 169 RFELIRHDVVEPIL--------LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-ARFLLTSTSEVYG 239 (436)
T ss_pred ceEEEECccccccc--------cCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-CEEEEECcHHHhC
Confidence 45677788755422 2489999999841 1223333333222 4899999987765
Q ss_pred CCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCcccc
Q psy16243 78 RQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 78 ~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~ 153 (782)
+.. -++|+.+.. .++ ..| -+.|..+|...|.++... ..+.+++++|+..+.+
T Consensus 240 ~~~~~p~~E~~~~~-~~p-----------------~~p------~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYG 295 (436)
T PLN02166 240 DPLEHPQKETYWGN-VNP-----------------IGE------RSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYG 295 (436)
T ss_pred CCCCCCCCcccccc-CCC-----------------CCC------CCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccC
Confidence 321 122321110 000 000 134899999999998752 2357788899887765
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=80.19 E-value=1.6 Score=49.85 Aligned_cols=105 Identities=17% Similarity=0.024 Sum_probs=59.6
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEeccccc------------------cccccccccCCCCCCeEEEEecccccC
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL------------------NSCLPGERLDHYTTESFVHVSTAYSNC 77 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~------------------~~~~~~~~~~~~~l~~f~hvsta~~~~ 77 (782)
+...+.||+.++.+ ..+++|||||+.. ++..+.+.++..+ .+|||+||..+-+
T Consensus 168 ~~~~i~~D~~~~~l--------~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~r~V~~SS~~VYg 238 (442)
T PLN02206 168 NFELIRHDVVEPIL--------LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYG 238 (442)
T ss_pred ceEEEECCccChhh--------cCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-CEEEEECChHHhC
Confidence 45677888765532 2489999999841 1222233333223 3899999987654
Q ss_pred CCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCcccc
Q psy16243 78 RQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 78 ~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~ 153 (782)
+.. -.+|+.+.. .+ | . .--+.|..+|...|.++... ..+.+++++|+..+.+
T Consensus 239 ~~~~~p~~E~~~~~-~~--------------------P-~--~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyG 294 (442)
T PLN02206 239 DPLQHPQVETYWGN-VN--------------------P-I--GVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYG 294 (442)
T ss_pred CCCCCCCCcccccc-CC--------------------C-C--CccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccC
Confidence 321 112221100 00 0 0 00135889999999988652 2356778888876654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 2e-37
Identities = 55/327 (16%), Positives = 96/327 (29%), Gaps = 74/327 (22%)
Query: 243 KFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLK 302
+ +R ++ V GD +P +G++ + L + + ++ AA V + +
Sbjct: 126 GDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHE 185
Query: 303 VAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITE 362
N+ T L+ +A K LK F +VSTA F E
Sbjct: 186 -LFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIE--PSAFTEDA----------- 230
Query: 363 LLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGA--GMPVAMVRPSIVIATNKEPI 420
D + T + W Y +K E ++R +PVA+ R +++A
Sbjct: 231 ---DIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSY-- 285
Query: 421 PGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGA-GLGLL-------RSMHADPELV 472
G +N T +V G+ S
Sbjct: 286 --------------------AGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAH 325
Query: 473 ADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKP 532
D +P V I V + Y+ ++
Sbjct: 326 FDGLPVTFVAEAIAVLGARVAGS--------------------SLAGFATYHVMNPHDDG 365
Query: 533 IKWKEFMALNEKA---VPEIPSTFAIW 556
I E++ +A + I FA W
Sbjct: 366 IGLDEYVDWLIEAGYPIRRIDD-FAEW 391
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 73.8 bits (181), Expect = 8e-14
Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 10/97 (10%)
Query: 161 FFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKV 220
+ +R ++ V GD +P +G++ + L + + ++ AA V + +
Sbjct: 127 DPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHE- 185
Query: 221 AVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLS 257
N+ T L+ +A K LK F Y+S
Sbjct: 186 LFGPNVAGTAELIRIALTTK-LKPF--------TYVS 213
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 5e-06
Identities = 18/87 (20%), Positives = 27/87 (31%), Gaps = 18/87 (20%)
Query: 66 SFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYAL 125
F +VSTA F E D + T + W Y
Sbjct: 208 PFTYVSTADVGAAIE--PSAFTEDA--------------DIRVISPTRTVDGGWAGGYGT 251
Query: 126 TKQVAEDMVRRGGA--GMPVAMVRPSI 150
+K E ++R +PVA+ R +
Sbjct: 252 SKWAGEVLLREANDLCALPVAVFRCGM 278
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 2e-14
Identities = 24/182 (13%), Positives = 48/182 (26%), Gaps = 42/182 (23%)
Query: 277 DRQTL---VDNIHVVFHCAATVRFDA-HLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332
D L + + V A + V+ L T + + + ++V
Sbjct: 67 DHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVG 125
Query: 333 T----AYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTK 388
+ P E FY+ + ++Y L K
Sbjct: 126 SAYAMPRHPQGLPGHEGLFYDSLPSGK--------------------------SSYVLCK 159
Query: 389 QVAEDMVRRGGA-GMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNH 447
++ R G+PV + P +V+ I G + A + ++
Sbjct: 160 WALDEQAREQARNGLPVVIGIPGMVLG------ELDIGPTTGRVITAIGNGEMTHYVAGQ 213
Query: 448 YG 449
Sbjct: 214 RN 215
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 5e-09
Identities = 83/601 (13%), Positives = 173/601 (28%), Gaps = 159/601 (26%)
Query: 235 MAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTL----VDNIHVVFH 290
M E + ++ + + V DC + + L +D+I
Sbjct: 7 MDFETGEHQY--QYKDILSVFEDAFVD-NFDCKD----VQDMPKSILSKEEIDHI----- 54
Query: 291 CAATVRFDAHLKVAVSINLRATKALLEM--AKEMKQLKSFVH---------VSTAYSN-C 338
+ + T L +K+ + ++ FV + +
Sbjct: 55 ------------IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ 102
Query: 339 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIV----DYWPNTYALTK-QVAED 393
RQP + R Y + L ND V Y AL + + A++
Sbjct: 103 RQPSMMTRMYIEQRDR--------LYND--NQVFAKYNVSRLQPYLKLRQALLELRPAKN 152
Query: 394 MVRRG--GAG---MPVAMVRPSIVIATNKEPIPGWIN--NHYGPTVIATNKEPI-----P 441
++ G G+G + + + V I W+N N P + + + P
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI-FWLNLKNCNSPETVLEMLQKLLYQIDP 211
Query: 442 GWINNHYGPTGI--VAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEK 499
W + + I + LR + ++ NV N + WN
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV--------QNA-KAWNAF 262
Query: 500 KAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYC 559
+ K++ + K D ++S M L V + + C
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHS------MTLTPDEVKSL---LLKYLDC 313
Query: 560 --FTL-NKYKSIHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIH--KFSEVISFF 614
L + + + + ++I A+ + D ++ ++ K + +I
Sbjct: 314 RPQDLPREVLTTNPRRL-------SII----AESIRDGLATWDNWKHVNCDKLTTIIES- 361
Query: 615 STQQFTFTNFNTQRLYTKMTEEDRALFNFDM-----------SQLGSFEVHSTLNTLVST 663
S + ++++ + ++F + +V +N L
Sbjct: 362 SLNVLEPAEY--RKMF-----DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK- 413
Query: 664 RSLKLLDAYQKIHKFSEVISFFSTQQ-FTFTNFNTQRLYTKMTEED---RALFNFDMSQL 719
SL ++ K IS S N L+ + + + + D+
Sbjct: 414 YSL--VEKQPK----ESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP 467
Query: 720 DWEKYMFWHIRGIRAY-LVKDPLSTVPDGIRLRRRLLIAHYLLIAALSVLFF---FLSVR 775
++Y + HI + L I H + ++F FL +
Sbjct: 468 YLDQYFYSHI----GHHLKN-----------------IEHPERMTLFRMVFLDFRFLEQK 506
Query: 776 I 776
I
Sbjct: 507 I 507
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 1e-04
Identities = 96/679 (14%), Positives = 180/679 (26%), Gaps = 237/679 (34%)
Query: 77 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIV----DYWPNTYALTK-QVAE 131
RQP + R Y + L ND V Y AL + + A+
Sbjct: 102 QRQPSMMTRMYIEQRDR--------LYND--NQVFAKYNVSRLQPYLKLRQALLELRPAK 151
Query: 132 DMVRRG--GAG---MPVAMVRPSIDLGILFYSEQFFDPMRKRCPHYLSKMVAVTGDCLKP 186
+++ G G+G + + + + + + +L+ +C P
Sbjct: 152 NVLIDGVLGSGKTWVALDVCL---SYKVQ---CKMDFKI-----FWLN-----LKNCNSP 195
Query: 187 GVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFD 246
E ++ + T R D + + I+ + E+++L
Sbjct: 196 ------ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH--------SIQAELRRL-LKS 240
Query: 247 PMRKRCPHYL-------SKMV-AVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD 298
+ C L +K A C + L+ T R
Sbjct: 241 KPYENC--LLVLLNVQNAKAWNAFNLSC------------KILL-----------TTR-F 274
Query: 299 AHLKVAVSINLRATKALLEMAK-----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPP-- 351
+ +S +L + E+K L Y +CR ++ P
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL------KYLDCR---PQD---LPREV 322
Query: 352 --VNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRP 409
NP L I E + D D W K V D + ++
Sbjct: 323 LTTNPRRLSIIAESIRDG------LATWDNW-------KHVNCDKLTT--------IIES 361
Query: 410 SIVIATNKEPIPGWINNHYGPTVIATNKEPIPG------WINNHYGPTGIVAGAGLGLLR 463
S+ + E + + IP W +
Sbjct: 362 SLNVLEPAE-----YRKMFDRLSVFPPSAHIPTILLSLIWFDVIK--------------- 401
Query: 464 SMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIY 523
+D +V + KL SL + P ++ I I
Sbjct: 402 ---SDVMVVVN-----------------------------KLHKYSLVEKQPKESTISIP 429
Query: 524 N-YVSSTQKPIKWKEFMALNEKAVP--EIPSTFAIWAYCFTLNKYKSIHKLYILFLHLLP 580
+ Y+ K + AL+ V IP TF Y + H+
Sbjct: 430 SIYLELKVKL---ENEYALHRSIVDHYNIPKTFDSDD--LIPPYLDQ----YF-YSHI-- 477
Query: 581 ALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFN--TQRL-YTKMTEED 637
G K ++ +++ F V F +F Q++ +
Sbjct: 478 -----------GHHLKNIEHPERMTLFRMV----------FLDFRFLEQKIRHDSTAWNA 516
Query: 638 RALFNFDMSQLGSFEVHSTLNTLVSTRSLK-LLDAYQKI------HKFSEVISFFSTQQF 690
+ QL ++ + N R + +LD KI K+++++ +
Sbjct: 517 SGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLL------RI 570
Query: 691 TFTNFNTQRLYTKMTEEDR 709
+ + R
Sbjct: 571 ALMAEDEAIFEEAHKQVQR 589
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 7e-06
Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 38/139 (27%)
Query: 264 GDCLKPGVGINSEDRQTLVDNIHVVFHCAA---TVRFDAHLKVAVSINLRATKALLEMAK 320
D + + ++ +FH A T +D + N + +K LL
Sbjct: 95 ADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKY--MMDNNYQYSKELLHYCL 152
Query: 321 EMKQLKSFVHVSTA--YSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVD 378
E + F++ S+A Y IE R YE P+N
Sbjct: 153 ERE--IPFLYASSAATYGGRTSDFIESREYEKPLNV------------------------ 186
Query: 379 YWPNTYALTKQVAEDMVRR 397
+ +K + ++ VR+
Sbjct: 187 -----FGYSKFLFDEYVRQ 200
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 39/130 (30%)
Query: 284 NIHVVFHCAA---TVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTA--YSNC 338
+ +FH AA T + L + N +A LLE+A+ K ++ S+A Y N
Sbjct: 90 HFDYLFHQAAVSDTTMLNQEL--VMKTNYQAFLNLLEIARSKK--AKVIYASSAGVYGNT 145
Query: 339 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398
+ P + + E P N Y +K ++ V
Sbjct: 146 KAPNVVGK-NESPENV-----------------------------YGFSKLCMDEFVLSH 175
Query: 399 GAGMPVAMVR 408
+R
Sbjct: 176 SNDNVQVGLR 185
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-05
Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 38/139 (27%)
Query: 264 GDCLKPGVGINSEDRQTLVDNIHVVFHCAA---TVRFDAHLKVAVSINLRATKALLEMAK 320
D + + ++ +FH A T +D + N + +K LL
Sbjct: 48 ADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKY--MMDNNYQYSKELLHYCL 105
Query: 321 EMKQLKSFVHVSTA--YSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVD 378
E + F++ S+A Y IE R YE P+N
Sbjct: 106 ERE--IPFLYASSAATYGGRTSDFIESREYEKPLNV------------------------ 139
Query: 379 YWPNTYALTKQVAEDMVRR 397
Y +K + ++ VR+
Sbjct: 140 -----YGYSKFLFDEYVRQ 153
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 26/168 (15%), Positives = 44/168 (26%), Gaps = 62/168 (36%)
Query: 273 INSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSI-----NLRATKALLEMAKEMKQLKS 327
ED ++++ V H AAT I N T+ L + E + +
Sbjct: 51 YTLEDLINQLNDVDAVVHLAATRG------SQGKISEFHDNEILTQNLYDACYENN-ISN 103
Query: 328 FVHVSTA--Y-SNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTY 384
V+ ST Y P E+ P Y
Sbjct: 104 IVYASTISAYSDETSLPWNEKE----LPLP-----------------DLM---------Y 133
Query: 385 ALTKQVAEDMVR--RGGAGMPVAMVRPSIVIATNKEPIPGWINNHYGP 430
++K E + G+ + +R + + YG
Sbjct: 134 GVSKLACEHIGNIYSRKKGLCIKNLRFA---------------HLYGF 166
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 4e-05
Identities = 26/145 (17%), Positives = 49/145 (33%), Gaps = 41/145 (28%)
Query: 284 NIHVVFHCAA--TVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTA---YSNC 338
+I +FH A + + + +A +N+ T +LE AK+ + ++ V ST
Sbjct: 62 SIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPET 120
Query: 339 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV--- 395
+ + P T + +TK AE +
Sbjct: 121 PKNKVPS---ITITRP-----------------RTM---------FGVTKIAAELLGQYY 151
Query: 396 -RRGGAGMPVAMVRPSIVIATNKEP 419
+ G+ V +R +I+ EP
Sbjct: 152 YEKF--GLDVRSLRYPGIISYKAEP 174
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 28/163 (17%), Positives = 43/163 (26%), Gaps = 43/163 (26%)
Query: 274 NSEDRQTLVDNIHVVFHCAA---TVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVH 330
+ +L D VFH A N T L E K K+LK V+
Sbjct: 89 DDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVY 148
Query: 331 VSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNT-YALTKQ 389
+ E + + TE T + + ++ Y+++K
Sbjct: 149 SAAG----------CSIAEKTFDD---AKATEE---------TDIVSLHNNDSPYSMSKI 186
Query: 390 VAEDMVR--RGGAGMPVAMVRPSIVIATNKEPIPGWINNHYGP 430
E +P R N YGP
Sbjct: 187 FGEFYSVYYHKQHQLPTVRARFQ---------------NVYGP 214
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 6e-04
Identities = 21/151 (13%), Positives = 39/151 (25%), Gaps = 38/151 (25%)
Query: 281 LVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST--AYSNC 338
+V + H + + + + N+ L E A+ V S+
Sbjct: 61 MVAGCDGIVHLGG-ISVEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYY 118
Query: 339 RQPI-IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR- 396
Q + + P P+ Y ++K E++ R
Sbjct: 119 PQTERLGP---DVPARPD--------------------------GLYGVSKCFGENLARM 149
Query: 397 -RGGAGMPVAMVRPSIVIA--TNKEPIPGWI 424
G A+VR N + W
Sbjct: 150 YFDKFGQETALVRIGSCTPEPNNYRMLSTWF 180
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 782 | |||
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.94 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.94 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.93 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.92 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.92 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.92 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.92 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.92 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.91 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.9 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.89 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.89 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.89 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.89 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.89 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.89 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.89 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.88 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.88 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.88 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.88 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.88 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.88 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.88 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.88 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.88 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.87 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.87 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.87 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.87 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.87 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.87 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.86 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.86 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.86 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.86 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.86 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.86 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.86 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.86 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.85 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.85 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.85 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.85 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.85 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.85 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.84 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.84 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.84 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.84 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.83 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.83 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.83 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.83 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.83 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.82 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.82 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.82 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.82 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.81 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.8 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.8 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.8 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.78 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.78 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.77 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.76 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.76 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.75 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.75 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.73 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.72 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.71 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.7 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.7 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.66 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.65 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.65 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.65 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.64 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.64 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.63 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.61 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.59 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.57 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.55 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.54 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.52 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.48 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.47 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.42 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.4 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.4 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.4 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.38 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.37 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.37 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.36 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.35 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.34 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.34 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.33 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.33 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.32 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.32 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.31 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.31 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.31 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.31 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.3 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.3 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.3 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.29 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.28 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.28 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.28 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.27 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.27 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.27 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.26 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.26 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.26 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.26 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.26 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.26 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.26 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.25 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.25 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.24 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.24 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.24 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.24 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.23 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.23 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.23 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.23 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.23 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.22 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.22 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.22 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.22 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.21 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.21 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.21 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.21 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.21 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.21 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.21 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.2 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.2 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.2 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.2 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.19 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.18 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.18 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.17 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.17 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.17 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.17 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.17 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.17 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.16 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.16 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.16 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.16 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.16 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.16 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.16 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.16 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.15 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.15 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.15 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.15 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.15 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.15 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.15 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.15 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.14 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.14 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.14 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.14 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.14 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.14 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.14 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.13 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.13 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.13 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.13 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.13 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.13 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.13 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.13 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.12 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.12 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.12 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.12 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.12 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.12 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.12 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.12 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.12 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.11 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.11 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.11 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.11 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.11 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.11 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.11 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.11 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.11 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.11 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.11 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.1 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.1 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.1 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.1 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.09 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.09 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.09 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.08 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.08 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.08 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.08 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.08 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.07 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.07 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.07 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.07 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.07 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.06 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.06 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.06 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.05 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.05 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.04 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.04 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.03 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.03 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.03 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.03 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.02 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.02 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.02 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.02 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.02 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.01 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.01 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.01 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.01 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 98.99 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 98.99 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 98.98 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.98 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 98.98 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 98.98 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 98.97 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 98.96 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 98.95 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 98.95 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.95 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 98.95 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.95 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 98.95 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.95 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.93 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.92 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 98.91 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.91 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 98.89 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 98.88 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 98.87 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 98.87 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 98.87 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.85 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 98.84 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 98.84 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.81 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 98.81 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 98.79 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 98.79 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 98.73 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.73 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.72 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.72 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 98.7 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 98.7 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.69 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.63 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.62 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.56 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.52 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 98.51 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.5 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.48 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.46 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.45 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.45 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.44 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.39 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.26 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.03 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.03 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 97.98 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 97.98 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 97.92 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 97.9 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 97.83 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 97.41 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.35 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 97.28 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 97.17 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.16 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.16 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 96.24 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 95.55 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 95.22 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 95.16 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 95.09 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 94.95 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 94.94 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 94.88 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 94.71 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 94.54 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 94.35 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 93.92 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 93.84 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 93.78 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 93.66 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 93.59 | |
| 4i4d_A | 93 | Peptide synthetase NRPS type II-PCP; structural ge | 93.27 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 93.16 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 93.01 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 92.94 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 92.79 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 92.69 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 92.38 | |
| 2afd_A | 88 | Protein ASL1650; twisted antiparallel helical bund | 92.21 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 92.06 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 91.89 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 91.82 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 91.39 | |
| 1dny_A | 91 | Non-ribosomal peptide synthetase peptidyl carrier | 91.36 | |
| 2ju1_A | 95 | Erythronolide synthase; carrier protein domain, mo | 91.28 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 91.0 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 90.99 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 90.85 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 90.76 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 90.13 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 90.06 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 90.06 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 89.88 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 89.77 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 89.49 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 89.15 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 89.13 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 89.06 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 89.05 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 89.01 | |
| 2cq8_A | 110 | 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH | 88.94 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 88.84 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 88.69 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 88.69 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 88.67 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 88.21 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 88.17 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 88.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 87.96 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 87.95 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 87.93 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 87.69 | |
| 2liu_A | 99 | CURA; holo state, transferase; NMR {Lyngbya majusc | 87.58 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 87.01 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 86.96 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 86.65 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 86.09 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 86.04 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 85.83 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 85.67 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 85.59 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 85.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 84.98 | |
| 2kr5_A | 89 | PKS, aflatoxin biosynthesis polyketide synthase; a | 84.96 | |
| 2l22_A | 212 | Mupirocin didomain acyl carrier protein; biosynthe | 84.25 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 83.59 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 82.37 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 82.25 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 81.95 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 80.49 |
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-27 Score=272.45 Aligned_cols=350 Identities=13% Similarity=0.074 Sum_probs=182.2
Q ss_pred CCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCCeEEEeCCCccccc-ccc
Q psy16243 79 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIDLGI-LFY 157 (782)
Q Consensus 79 ~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~~~~-~~~ 157 (782)
+..++++||+.|.||+.+++++..+++ ..-.++...++.+|+...+++.+-+..-.. ... +...... .+.
T Consensus 62 ~i~~~~~ff~lGg~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~~~~~~--~~~------~~~~~~~~~~~ 132 (508)
T 4f6l_B 62 DVGVDDDFFELGGNSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQNQQSL--VAL------PDNLSELQKIV 132 (508)
T ss_dssp ------------------------------------------------------------CCC------CSTHHHHHHHH
T ss_pred CCCCCCChHHcCchHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHhhcccc--ccc------hhhhHHHHHHh
Confidence 566799999999999999999999976 445677788899999988887665432110 000 1110000 000
Q ss_pred ccc-ccccccccCcccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHH
Q psy16243 158 SEQ-FFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMA 236 (782)
Q Consensus 158 ~~~-~f~~l~~~~p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl 236 (782)
... ..+......+.-..+.|+||| |+|+.|. +++.++. ..+.+|+|++|........+++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~VLVTG-----atG~iG~---------~l~~~L~-----~~g~~V~~l~R~~~~~~~~~~l 193 (508)
T 4f6l_B 133 MSRYNLGILEDSLSHRPLGNTLLTG-----ATGFLGA---------YLIEALQ-----GYSHRIYCFIRADNEEIAWYKL 193 (508)
T ss_dssp HHHHTTCCCSTTSCBCCCEEEEESC-----TTSHHHH---------HHHHHTB-----TTEEEEEEEEESSSHHHHHHHH
T ss_pred hhcccccccccccccCCCCeEEEEC-----CccchHH---------HHHHHHH-----hcCCEEEEEECCCChHHHHHHH
Confidence 000 000000111112247899999 5555332 1111221 2368999999997765566666
Q ss_pred HHhhcccccccccccCcccccceeEEecCCCC-CCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHH
Q psy16243 237 KEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLK-PGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKAL 315 (782)
Q Consensus 237 ~~~~~~~~f~~l~~~~~~~~~kv~~i~gDi~~-~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~L 315 (782)
.+.+... |.... ......+++++.||+++ +.++ +..++|+|||+||.+++..++.+..++|+.||+++
T Consensus 194 ~~~l~~~-~~~~~--~~~~~~~v~~v~~Dl~d~~~l~--------~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~l 262 (508)
T 4f6l_B 194 MTNLNDY-FSEET--VEMMLSNIEVIVGDFECMDDVV--------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDV 262 (508)
T ss_dssp HHHHHHH-SCHHH--HHHHSTTEEEEEEBTTBCSSCC--------CSSCCSEEEECCCC--------CCHHHHHHHHHHH
T ss_pred HHHHHHh-ccccc--chhccCceEEEecCCcccccCC--------CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHH
Confidence 5543321 11000 01224689999999999 5554 56789999999999988888888999999999999
Q ss_pred HHHHHHccCCceEEEEecceeccCC-------CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHH
Q psy16243 316 LEMAKEMKQLKSFVHVSTAYSNCRQ-------PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTK 388 (782)
Q Consensus 316 le~a~~~~~~~~fV~vST~~v~~~~-------~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK 388 (782)
+++|++ +.++|||+||.++ |.. .++.|+... ......+.|+.||
T Consensus 263 l~~a~~--~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~--------------------------~~~~~~~~Y~~sK 313 (508)
T 4f6l_B 263 IRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVY--------------------------KGQLLTSPYTRSK 313 (508)
T ss_dssp HHHHHT--TTCEEEEEEESCT-TSEECTTCSCCEECTTCSC--------------------------SSBCCCSHHHHHH
T ss_pred HHHHHh--CCCcEEEeCChhh-ccCCccCCcCccccccccc--------------------------ccccCCCcHHHHH
Confidence 999997 5799999999999 431 123333110 0112348999999
Q ss_pred HHHHHHHHHcC-CCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccc--cchhhHHHHhhcCceeee
Q psy16243 389 QVAEDMVRRGG-AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNH--YGPTGIVAGAGLGLLRSM 465 (782)
Q Consensus 389 ~~aE~ll~~~~-~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~--~~~~~~~~~~~~g~~~~~ 465 (782)
+++|+++..+. .|++++|+||+.|+|+...+. +..+. .....++..+..+....
T Consensus 314 ~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~----------------------~~~~~~~~~~~~~i~~~~~~~~~~- 370 (508)
T 4f6l_B 314 FYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRW----------------------HMRNIKTNRFSMVMNDLLQLDCIG- 370 (508)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCEESCSSSCC----------------------CCTTCTTCHHHHHHHHHTTCSEEE-
T ss_pred HHHHHHHHHHHHcCCCEEEEecceeccCCCCCc----------------------ccCCcchHHHHHHHHHHHHcCCCC-
Confidence 99999999873 699999999999999865421 01110 11123444444443222
Q ss_pred ccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhc
Q psy16243 466 HADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKA 545 (782)
Q Consensus 466 ~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~ 545 (782)
.++++...+++||||+|++++.++... ..+++||++++ ++++|.|+++.+.+.
T Consensus 371 ~~~g~~~~~~v~v~DvA~ai~~~~~~~-------------------------~~~~~~nl~~~--~~~s~~el~~~i~~~ 423 (508)
T 4f6l_B 371 VSMAEMPVDFSFVDTTARQIVALAQVN-------------------------TPQIIYHVLSP--NKMPVKSLLECVKRK 423 (508)
T ss_dssp TTGGGSEEECEEHHHHHHHHHHHTTBC-------------------------CSCSEEEESCS--CEEEHHHHHHHHHSS
T ss_pred CCccCceEEEEcHHHHHHHHHHHHhCC-------------------------CCCCEEEeCCC--CCCCHHHHHHHHHHc
Confidence 234688999999999999999988653 25789999999 899999999999976
Q ss_pred c
Q psy16243 546 V 546 (782)
Q Consensus 546 ~ 546 (782)
.
T Consensus 424 ~ 424 (508)
T 4f6l_B 424 E 424 (508)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-26 Score=249.80 Aligned_cols=265 Identities=19% Similarity=0.132 Sum_probs=194.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchh-hHHHHHHHhhcccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATK-ALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~-~~~erl~~~~~~~~f~~l~~ 250 (782)
..++.|+|||.+|+.|..+ .+.|.. .+.+|+++.|..... ...+.+.....
T Consensus 23 ~~~~~vlVtGatG~iG~~l----~~~L~~---------------~g~~V~~~~r~~~~~~~~~~~~~~~~~--------- 74 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNL----LEKLLK---------------LNQVVIGLDNFSTGHQYNLDEVKTLVS--------- 74 (351)
T ss_dssp HSCCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEECCSSCCHHHHHHHHHTSC---------
T ss_pred CCCCeEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCCCCchhhhhhhhhccc---------
Confidence 3468999999444433332 223322 257899999975432 22222222110
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchh---hHHHHHHhhHHHHHHHHHHHHHccCCce
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDA---HLKVAVSINLRATKALLEMAKEMKQLKS 327 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~Lle~a~~~~~~~~ 327 (782)
+....+++++.+|++++ +++.++++++|+|||+||...... .....+++|+.||.+++++|++. ++++
T Consensus 75 --~~~~~~~~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~ 145 (351)
T 3ruf_A 75 --TEQWSRFCFIEGDIRDL------TTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQS 145 (351)
T ss_dssp --HHHHTTEEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSE
T ss_pred --cccCCceEEEEccCCCH------HHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCE
Confidence 11125899999999987 889999999999999999765443 34568899999999999999997 7999
Q ss_pred EEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCc
Q psy16243 328 FVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMP 403 (782)
Q Consensus 328 fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp 403 (782)
|||+||+++|+... ++.|+... ...+.|+.||..+|+++..+ ..|++
T Consensus 146 ~v~~SS~~vyg~~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~E~~~~~~~~~~g~~ 196 (351)
T 3ruf_A 146 FTYAASSSTYGDHPALPKVEENIG-----------------------------NPLSPYAVTKYVNEIYAQVYARTYGFK 196 (351)
T ss_dssp EEEEEEGGGGTTCCCSSBCTTCCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred EEEEecHHhcCCCCCCCCccCCCC-----------------------------CCCChhHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999998643 44554211 12288999999999999887 34899
Q ss_pred EEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHH
Q psy16243 404 VAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVIN 483 (782)
Q Consensus 404 ~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~ 483 (782)
++|+||+.||||...+.. .+. .....++..+..|....++++++..+++|||+|+|+
T Consensus 197 ~~ilRp~~v~G~~~~~~~--------------------~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ 253 (351)
T 3ruf_A 197 TIGLRYFNVFGRRQDPNG--------------------AYA---AVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQ 253 (351)
T ss_dssp CEEEEECSEESTTCCCCS--------------------TTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred EEEEeeCceeCcCCCCCc--------------------chh---hHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHH
Confidence 999999999998765422 110 011245666677777778899999999999999999
Q ss_pred HHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 484 CIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 484 aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
+++.++.... ...+++||++++ .++|+.|+++.+.+.++..+
T Consensus 254 a~~~~~~~~~-----------------------~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 295 (351)
T 3ruf_A 254 MNILSALAKD-----------------------SAKDNIYNVAVG--DRTTLNELSGYIYDELNLIH 295 (351)
T ss_dssp HHHHHHTCCG-----------------------GGCSEEEEESCS--CCEEHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhcc-----------------------ccCCCEEEeCCC--CcccHHHHHHHHHHHhCccc
Confidence 9998886521 135789999999 89999999999999988743
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-25 Score=236.95 Aligned_cols=242 Identities=17% Similarity=0.085 Sum_probs=186.0
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.+.|+|||.+|+.|..+ .+.|.. .+.+|+++.|..+.. +
T Consensus 2 ~~~vlVtGatG~iG~~l----~~~L~~---------------~g~~V~~~~r~~~~~---~------------------- 40 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYV----VESIKN---------------DGNTPIILTRSIGNK---A------------------- 40 (311)
T ss_dssp CCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCCC-------------------------
T ss_pred CCEEEEECCCcHHHHHH----HHHHHh---------------CCCEEEEEeCCCCcc---c-------------------
Confidence 46899999444444333 233322 257899999973211 0
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
..+++++.+|++ + +++.++++++|+|||+||..... .....+++|+.||.+++++|++. ++++|||+||
T Consensus 41 --~~~~~~~~~Dl~-~------~~~~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS 109 (311)
T 3m2p_A 41 --INDYEYRVSDYT-L------EDLINQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYAST 109 (311)
T ss_dssp ----CCEEEECCCC-H------HHHHHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEE
T ss_pred --CCceEEEEcccc-H------HHHHHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcc
Confidence 126788999998 7 88999999999999999987665 55567889999999999999997 7999999999
Q ss_pred ceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecC
Q psy16243 334 AYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRP 409 (782)
Q Consensus 334 ~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp 409 (782)
.++|+... ++.|+... ...+.|+.||+.+|+++..+ ..+++++|+||
T Consensus 110 ~~vyg~~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp 160 (311)
T 3m2p_A 110 ISAYSDETSLPWNEKELP-----------------------------LPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRF 160 (311)
T ss_dssp GGGCCCGGGCSBCTTSCC-----------------------------CCSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEE
T ss_pred HHHhCCCCCCCCCCCCCC-----------------------------CCCchhHHHHHHHHHHHHHHHHHcCCCEEEEee
Confidence 99998643 44554211 11289999999999999987 35999999999
Q ss_pred CeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhh
Q psy16243 410 SIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAA 489 (782)
Q Consensus 410 ~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~ 489 (782)
+.+|||...+. .....++..+..|....++++++..+++|+++|+|++++.++
T Consensus 161 ~~v~G~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~ 213 (311)
T 3m2p_A 161 AHLYGFNEKNN---------------------------YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYAL 213 (311)
T ss_dssp CEEECSCC--C---------------------------CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHT
T ss_pred CceeCcCCCCC---------------------------CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHH
Confidence 99999765421 112245666677877778889999999999999999999988
Q ss_pred hhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 490 WNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
... ..+++||++++ .++|+.|+++.+.+.++..+
T Consensus 214 ~~~-------------------------~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 247 (311)
T 3m2p_A 214 KQE-------------------------KVSGTFNIGSG--DALTNYEVANTINNAFGNKD 247 (311)
T ss_dssp TCT-------------------------TCCEEEEECCS--CEECHHHHHHHHHHHTTCTT
T ss_pred hcC-------------------------CCCCeEEeCCC--CcccHHHHHHHHHHHhCCCC
Confidence 642 25789999999 89999999999999988643
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-25 Score=254.48 Aligned_cols=295 Identities=18% Similarity=0.210 Sum_probs=202.4
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecc-cceeeeeecccchhhHHHHHHHhhcccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDA-HLKVAVSINLRATKALLEMAKEMKQLKFFDPM 248 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~-~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l 248 (782)
+...+++|+|||.+|+.|..+ .+.|.. ... +.+|+++.|........+++.+.+.....+.+
T Consensus 69 ~~~~~~~VLVTGatG~IG~~l----~~~Ll~-------------~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~ 131 (478)
T 4dqv_A 69 PSPELRTVLLTGATGFLGRYL----VLELLR-------------RLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELL 131 (478)
T ss_dssp CCSCCCEEEEECTTSHHHHHH----HHHHHH-------------HSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHH----HHHHHh-------------cCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhh
Confidence 345678999999544444333 223321 112 47999999998777677777655432100000
Q ss_pred cccCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceE
Q psy16243 249 RKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSF 328 (782)
Q Consensus 249 ~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~f 328 (782)
.........+++++.||++++.+|++.+++.++++++|+|||+||.+++ .++.+.+++|+.||.+++++|++. ++++|
T Consensus 132 ~~~~~~~~~~v~~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~ 209 (478)
T 4dqv_A 132 RHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTT-KLKPF 209 (478)
T ss_dssp HHHHHHHTTTEEEEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSS-SCCCE
T ss_pred hhhhhhccCceEEEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhC-CCCeE
Confidence 0000112368999999999999999999999999999999999999887 666678899999999999999986 78999
Q ss_pred EEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcC--CccCCCCccHHHHHHHHHHHHHHcC--CCC
Q psy16243 329 VHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITP--GIVDYWPNTYALTKQVAEDMVRRGG--AGM 402 (782)
Q Consensus 329 V~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p--~~~~~~pn~Y~~SK~~aE~ll~~~~--~gl 402 (782)
||+||.++++... .+.|+... ....+ .....+++.|+.||+++|.++..+. .|+
T Consensus 210 V~iSS~~v~~~~~~~~~~E~~~~--------------------~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi 269 (478)
T 4dqv_A 210 TYVSTADVGAAIEPSAFTEDADI--------------------RVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCAL 269 (478)
T ss_dssp EEEEEGGGGTTSCTTTCCSSSCH--------------------HHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEeehhhcCccCCCCcCCcccc--------------------cccCcccccccccccchHHHHHHHHHHHHHHHHHhCC
Confidence 9999999987632 34443110 00011 1122345889999999999999884 499
Q ss_pred cEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHH-HhhcCceeee-ccC------CCcccc
Q psy16243 403 PVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVA-GAGLGLLRSM-HAD------PELVAD 474 (782)
Q Consensus 403 p~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~-~~~~g~~~~~-~~~------~~~~~d 474 (782)
+++|+||++|||+.... | .+|.. +|... ++. ....|..+.. .+. ++...+
T Consensus 270 ~~~ivRpg~v~G~~~~~--g-----------~~~~~---~~~~~------l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~ 327 (478)
T 4dqv_A 270 PVAVFRCGMILADTSYA--G-----------QLNMS---DWVTR------MVLSLMATGIAPRSFYEPDSEGNRQRAHFD 327 (478)
T ss_dssp CEEEEEECEEECCSSSS--S-----------CCCTT---BHHHH------HHHHHHHHCEEESCSBCCCTTSCCCCCCCC
T ss_pred CeEEEECceeeCCCccC--C-----------cCCHH---HHHHH------HHHHHHHcCcccccccccccccccccceee
Confidence 99999999999975421 1 01111 33322 222 2334554432 211 267899
Q ss_pred ccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhc
Q psy16243 475 MVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKA 545 (782)
Q Consensus 475 ~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~ 545 (782)
+|||||+|++++.++...... ....+++||++++..++++|.|+++.+.+.
T Consensus 328 ~v~vdDvA~ai~~~~~~~~~~--------------------~~~~~~~ynv~~~~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 328 GLPVTFVAEAIAVLGARVAGS--------------------SLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp EEEHHHHHHHHHHHHHTTC-C--------------------CCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred eeeHHHHHHHHHHHHhhcccC--------------------CCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence 999999999999988652110 124578999999943349999999999986
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-23 Score=228.70 Aligned_cols=264 Identities=20% Similarity=0.124 Sum_probs=184.8
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccch-hhHHHHHHHhhcccccccccccC
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRAT-KALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~-~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
+++|+|||.+|+.|..+ .+.|.. .+.+|+++.|.... ....+.+.+..
T Consensus 5 ~~~vlVTGatG~iG~~l----~~~L~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~------------ 53 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHT----AVELLA---------------HGYDVVIADNLVNSKREAIARIEKIT------------ 53 (341)
T ss_dssp SCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEECCCSSSCTHHHHHHHHHH------------
T ss_pred CcEEEEecCCcHHHHHH----HHHHHH---------------CCCcEEEEecCCcchHHHHHHHHhhc------------
Confidence 57899999444444333 233322 25788888886432 22223332211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCce
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKS 327 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~ 327 (782)
..++.++.+|++++ +++.++++ ++|+|||+||..... ....+.+++|+.||.+++++|++. ++++
T Consensus 54 ---~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ 123 (341)
T 3enk_A 54 ---GKTPAFHETDVSDE------RALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKR 123 (341)
T ss_dssp ---SCCCEEECCCTTCH------HHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCE
T ss_pred ---CCCceEEEeecCCH------HHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCE
Confidence 23688999999987 88999888 799999999987643 334478899999999999999987 7899
Q ss_pred EEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---CCCC
Q psy16243 328 FVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG---GAGM 402 (782)
Q Consensus 328 fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~---~~gl 402 (782)
|||+||.++|+... ++.|+... ...+.|+.||.++|+++..+ ..++
T Consensus 124 iv~~SS~~~~g~~~~~~~~e~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~ 174 (341)
T 3enk_A 124 IVFSSSATVYGVPERSPIDETFPL-----------------------------SATNPYGQTKLMAEQILRDVEAADPSW 174 (341)
T ss_dssp EEEEEEGGGBCSCSSSSBCTTSCC-----------------------------BCSSHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred EEEEecceEecCCCCCCCCCCCCC-----------------------------CCCChhHHHHHHHHHHHHHHhhcCCCc
Confidence 99999999998643 45554211 11278999999999999876 2369
Q ss_pred cEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcC--ceeeecc------CCCcccc
Q psy16243 403 PVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLG--LLRSMHA------DPELVAD 474 (782)
Q Consensus 403 p~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g--~~~~~~~------~~~~~~d 474 (782)
+++++||++||||...+..|.... +. .......+.....| ....+.| +++..++
T Consensus 175 ~~~~lRp~~v~G~~~~~~~g~~~~---------------~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 236 (341)
T 3enk_A 175 RVATLRYFNPVGAHESGLIGEDPA---------------GI---PNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRD 236 (341)
T ss_dssp EEEEEEECEEECCCTTSSCCCCCS---------------SS---CSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEEC
T ss_pred eEEEEeeccccCCccccccCCCcc---------------cC---ccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEe
Confidence 999999999999876443311000 00 01111233333333 2333445 7889999
Q ss_pred ccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 475 MVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 475 ~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+|||+|+|++++.++..... ...+++||++++ +++|+.|+++.+.+.++..
T Consensus 237 ~i~v~Dva~a~~~~~~~~~~----------------------~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 287 (341)
T 3enk_A 237 YIHVVDLARGHIAALDALER----------------------RDASLTVNLGTG--RGYSVLEVVRAFEKASGRA 287 (341)
T ss_dssp EEEHHHHHHHHHHHHHHHHH----------------------HTSCEEEEESCS--CCEEHHHHHHHHHHHHCSC
T ss_pred eEEHHHHHHHHHHHHHhhhc----------------------CCcceEEEeCCC--CceeHHHHHHHHHHHhCCC
Confidence 99999999999998865211 135789999999 8999999999999988754
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.4e-25 Score=239.03 Aligned_cols=204 Identities=18% Similarity=0.070 Sum_probs=163.2
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEE
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHV 331 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~v 331 (782)
.+++++.+|++++ +.+..++++ +|+|||+||..... ......+++|+.||.+++++|++. ++++|||+
T Consensus 75 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~ 147 (346)
T 4egb_A 75 PNYYFVKGEIQNG------ELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQV 147 (346)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEE
T ss_pred CCeEEEEcCCCCH------HHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEe
Confidence 5899999999987 889999987 99999999987654 345578899999999999999997 78999999
Q ss_pred ecceeccCCC---cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEE
Q psy16243 332 STAYSNCRQP---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAM 406 (782)
Q Consensus 332 ST~~v~~~~~---~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~I 406 (782)
||+++|+... ++.|+... ...+.|+.||+.+|+++..+. .|++++|
T Consensus 148 SS~~vy~~~~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~i 198 (346)
T 4egb_A 148 STDEVYGSLGKTGRFTEETPL-----------------------------APNSPYSSSKASADMIALAYYKTYQLPVIV 198 (346)
T ss_dssp EEGGGGCCCCSSCCBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred CchHHhCCCCcCCCcCCCCCC-----------------------------CCCChhHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 9999998642 45554211 122789999999999999873 4899999
Q ss_pred ecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHH
Q psy16243 407 VRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCII 486 (782)
Q Consensus 407 vRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii 486 (782)
+||+.+|||...+.. ....++..+..|....+.++++..+++|||+|+|++++
T Consensus 199 lRp~~v~G~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 251 (346)
T 4egb_A 199 TRCSNNYGPYQYPEK---------------------------LIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAID 251 (346)
T ss_dssp EEECEEESTTCCTTS---------------------------HHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHH
T ss_pred EeecceeCcCCCccc---------------------------hHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHH
Confidence 999999998653211 11245666677776667788999999999999999999
Q ss_pred HhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 487 SAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 487 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
.++... ..+++||++++ +++++.|+++.+.+.++..+
T Consensus 252 ~~~~~~-------------------------~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 288 (346)
T 4egb_A 252 VVLHKG-------------------------RVGEVYNIGGN--NEKTNVEVVEQIITLLGKTK 288 (346)
T ss_dssp HHHHHC-------------------------CTTCEEEECCS--CCEEHHHHHHHHHHHHTCCG
T ss_pred HHHhcC-------------------------CCCCEEEECCC--CceeHHHHHHHHHHHhCCCc
Confidence 988653 25789999999 88999999999999988643
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.8e-25 Score=241.85 Aligned_cols=267 Identities=15% Similarity=0.087 Sum_probs=191.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+..+.|+|||.+|+.|..+ .+.|... .+.+|+++.|..... ...
T Consensus 22 m~~~~vlVtGatG~iG~~l----~~~L~~~--------------~g~~V~~~~r~~~~~------~~~------------ 65 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHL----SKRILET--------------TDWEVFGMDMQTDRL------GDL------------ 65 (372)
T ss_dssp -CCCEEEEESCSSHHHHHH----HHHHHHH--------------SSCEEEEEESCCTTT------GGG------------
T ss_pred cCCCEEEEECCCChHHHHH----HHHHHhC--------------CCCEEEEEeCChhhh------hhh------------
Confidence 4568899999444444333 2223211 246899999975321 000
Q ss_pred CcccccceeEEecCCC-CCCCCCCHHhHHHHhcCceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCce
Q psy16243 252 CPHYLSKMVAVTGDCL-KPGVGINSEDRQTLVDNIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKS 327 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~-~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~ 327 (782)
....+++++.+|++ ++ +.+.++++++|+|||+||..... ....+.+++|+.||.+++++|++. + ++
T Consensus 66 --~~~~~v~~~~~Dl~~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~ 135 (372)
T 3slg_A 66 --VKHERMHFFEGDITINK------EWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KH 135 (372)
T ss_dssp --GGSTTEEEEECCTTTCH------HHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CE
T ss_pred --ccCCCeEEEeCccCCCH------HHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-Cc
Confidence 01248999999999 65 78888999999999999987643 345578899999999999999998 5 99
Q ss_pred EEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC-CCCcE
Q psy16243 328 FVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG-AGMPV 404 (782)
Q Consensus 328 fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~-~glp~ 404 (782)
|||+||+++|+... ++.|+..+.+. .| .....+.|+.||..+|+++..+. .++++
T Consensus 136 ~v~~SS~~vyg~~~~~~~~e~~~~~~~--------------------~p--~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~ 193 (372)
T 3slg_A 136 LVFPSTSEVYGMCADEQFDPDASALTY--------------------GP--INKPRWIYACSKQLMDRVIWGYGMEGLNF 193 (372)
T ss_dssp EEEECCGGGGBSCCCSSBCTTTCCEEE--------------------CC--TTCTTHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred EEEeCcHHHhCCCCCCCCCcccccccc--------------------CC--CCCCCCcHHHHHHHHHHHHHHHHHCCCCE
Confidence 99999999998743 44444221000 00 01122689999999999999883 38999
Q ss_pred EEecCCeEEeccCCCCcccccccCCcccccccCCCccccccccc-chhhHHHHhhcCceeeeccCCCccccccchhHHHH
Q psy16243 405 AMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHY-GPTGIVAGAGLGLLRSMHADPELVADMVPADNVIN 483 (782)
Q Consensus 405 ~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~ 483 (782)
+|+||+.||||...+.. ++..... ....++..+..|....+.++++..+++|||+|+|+
T Consensus 194 ~ilRp~~v~G~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ 253 (372)
T 3slg_A 194 TLFRPFNWIGPGLDSIY--------------------TPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGIS 253 (372)
T ss_dssp EEEEECSEECSSCCCTT--------------------CSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHH
T ss_pred EEEccccccCCCccccc--------------------ccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHH
Confidence 99999999998765422 1111111 12245566677877778888999999999999999
Q ss_pred HHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeec-CCCCcccHHHHHHHHHhcccccC
Q psy16243 484 CIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVS-STQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 484 aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~-~~~~~~t~~el~~~i~~~~~~~p 550 (782)
+++.++..... ...+++||+++ + +++|+.|+++.+.+.++..+
T Consensus 254 a~~~~~~~~~~----------------------~~~~~~~ni~~~~--~~~s~~e~~~~i~~~~g~~~ 297 (372)
T 3slg_A 254 ALMKIIENSNG----------------------VATGKIYNIGNPN--NNFSVRELANKMLELAAEFP 297 (372)
T ss_dssp HHHHHHHCGGG----------------------TTTTEEEEECCTT--CEEEHHHHHHHHHHHHHHCT
T ss_pred HHHHHHhcccC----------------------cCCCceEEeCCCC--CCccHHHHHHHHHHHhCCCc
Confidence 99999875411 13578999999 5 68999999999999887643
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.5e-25 Score=239.06 Aligned_cols=256 Identities=16% Similarity=0.126 Sum_probs=183.6
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
....+|.|+|||.+|+.|..+ .+.|.. .+.+|+++.|....
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l----~~~L~~---------------~G~~V~~~~r~~~~-------------------- 55 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAV----VAALRT---------------QGRTVRGFDLRPSG-------------------- 55 (347)
T ss_dssp ------CEEEETTTSHHHHHH----HHHHHH---------------TTCCEEEEESSCCS--------------------
T ss_pred cccCCCEEEEECCCChHHHHH----HHHHHh---------------CCCEEEEEeCCCCC--------------------
Confidence 345678999999444444333 223321 25788999886431
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchh-hHHHHHHhhHHHHHHHHHHHHHccCCceE
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDA-HLKVAVSINLRATKALLEMAKEMKQLKSF 328 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~-~~~~~~~~Nv~gt~~Lle~a~~~~~~~~f 328 (782)
.++.++.+|++++ +++.++++++|+|||+||...... .....+++|+.||.+++++|++. ++++|
T Consensus 56 -------~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~ 121 (347)
T 4id9_A 56 -------TGGEEVVGSLEDG------QALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-GVRRF 121 (347)
T ss_dssp -------SCCSEEESCTTCH------HHHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-TCSEE
T ss_pred -------CCccEEecCcCCH------HHHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-CCCeE
Confidence 3678899999987 889999999999999999876643 34778999999999999999986 79999
Q ss_pred EEEecceeccCC--C--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCC
Q psy16243 329 VHVSTAYSNCRQ--P--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGM 402 (782)
Q Consensus 329 V~vST~~v~~~~--~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~gl 402 (782)
||+||.++|+.. . ++.|+... ...+.|+.||.++|+++..+ ..++
T Consensus 122 V~~SS~~vyg~~~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~E~~~~~~~~~~~~ 172 (347)
T 4id9_A 122 VFASSGEVYPENRPEFLPVTEDHPL-----------------------------CPNSPYGLTKLLGEELVRFHQRSGAM 172 (347)
T ss_dssp EEEEEGGGTTTTSCSSSSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHSSS
T ss_pred EEECCHHHhCCCCCCCCCcCCCCCC-----------------------------CCCChHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999862 2 34444211 12288999999999999877 3589
Q ss_pred cEEEecCCeEE-------------eccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCC
Q psy16243 403 PVAMVRPSIVI-------------ATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADP 469 (782)
Q Consensus 403 p~~IvRp~~v~-------------G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 469 (782)
+++|+||+.+| ||...+.+.+ .+.. .+. ......++..+..|....+.+++
T Consensus 173 ~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~-----------~~~~---~~~--~~~~~~~~~~~~~~~~~~~~g~~ 236 (347)
T 4id9_A 173 ETVILRFSHTQDATELLDEDSFFSGPRFFLRPRI-----------HQQQ---NFG--NAAIAELLQSRDIGEPSHILARN 236 (347)
T ss_dssp EEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHH-----------HHHH---HHT--CHHHHHHHHHHCCSSCCEEEEEC
T ss_pred ceEEEccceEeecccccccccccCCCCccccccc-----------cccc---ccc--hhHHHHHHHHHHcCCCeEEeCCC
Confidence 99999999999 5432211000 0000 000 00112345566677666778888
Q ss_pred Cccccc----cchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhc
Q psy16243 470 ELVADM----VPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKA 545 (782)
Q Consensus 470 ~~~~d~----VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~ 545 (782)
+..+++ ++|+|+|++++.++.... ..+++||++++ .++|+.|+++.+.+.
T Consensus 237 ~~~~~~~~~~i~v~Dva~ai~~~~~~~~------------------------~~~~~~ni~~~--~~~s~~e~~~~i~~~ 290 (347)
T 4id9_A 237 ENGRPFRMHITDTRDMVAGILLALDHPE------------------------AAGGTFNLGAD--EPADFAALLPKIAAL 290 (347)
T ss_dssp TTCCBCEECEEEHHHHHHHHHHHHHCGG------------------------GTTEEEEESCS--SCEEHHHHHHHHHHH
T ss_pred CcccCCccCcEeHHHHHHHHHHHhcCcc------------------------cCCCeEEECCC--CcccHHHHHHHHHHH
Confidence 899999 999999999999986531 24789999999 899999999999998
Q ss_pred cccc
Q psy16243 546 VPEI 549 (782)
Q Consensus 546 ~~~~ 549 (782)
++..
T Consensus 291 ~g~~ 294 (347)
T 4id9_A 291 TGLP 294 (347)
T ss_dssp HCCC
T ss_pred hCCC
Confidence 8754
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=231.61 Aligned_cols=263 Identities=17% Similarity=0.088 Sum_probs=189.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.++.|+|||.+|+.|..+ .+.|.. ...+.+|+++.|.........+..+. +....
T Consensus 8 ~~~~~vlVTGatG~IG~~l----~~~L~~-------------~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~-- 63 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNL----AFHFQE-------------NHPKAKVVVLDKFRSNTLFSNNRPSS-----LGHFK-- 63 (362)
T ss_dssp CTTCEEEEETTTSHHHHHH----HHHHHH-------------HCTTSEEEEEECCCCC-------CCC-----CCCGG--
T ss_pred cCCCEEEEECCCCHHHHHH----HHHHHh-------------hCCCCeEEEEECCCccccccccchhh-----hhhhh--
Confidence 4578999999444444333 233322 01367899999975422111111100 00000
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHH-hcCceEEEEcCcccCch-hhHHHHHHhhHHHHHHHHHHHHHccCCceEE
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTL-VDNIHVVFHCAATVRFD-AHLKVAVSINLRATKALLEMAKEMKQLKSFV 329 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l-~~~vdiViH~Aa~v~f~-~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV 329 (782)
.....++.++.+|++++ ++++.+ ..++|+|||+||..... ...+..+++|+.||.+++++|++. +++ ||
T Consensus 64 -~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V 134 (362)
T 3sxp_A 64 -NLIGFKGEVIAADINNP------LDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VI 134 (362)
T ss_dssp -GGTTCCSEEEECCTTCH------HHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EE
T ss_pred -hccccCceEEECCCCCH------HHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EE
Confidence 01123678999999987 888888 78899999999976643 567789999999999999999987 666 99
Q ss_pred EEecceeccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEec
Q psy16243 330 HVSTAYSNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVR 408 (782)
Q Consensus 330 ~vST~~v~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvR 408 (782)
|+||+++|+... ++.|+... ...+.|+.||..+|.++..+...++++++|
T Consensus 135 ~~SS~~vyg~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR 185 (362)
T 3sxp_A 135 YASSAGVYGNTKAPNVVGKNE-----------------------------SPENVYGFSKLCMDEFVLSHSNDNVQVGLR 185 (362)
T ss_dssp EEEEGGGGCSCCSSBCTTSCC-----------------------------CCSSHHHHHHHHHHHHHHHTTTTSCEEEEE
T ss_pred EeCcHHHhCCCCCCCCCCCCC-----------------------------CCCChhHHHHHHHHHHHHHHhccCCEEEEE
Confidence 999999998754 45454211 122789999999999999996669999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
|++||||...+.. .+. .....++..+..|......++++..+++|+|+|+|++++.+
T Consensus 186 ~~~v~Gp~~~~~~--------------------~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~ 242 (362)
T 3sxp_A 186 YFNVYGPREFYKE--------------------KTA---SMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKA 242 (362)
T ss_dssp ECSEESTTCGGGG--------------------GGS---CHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHH
T ss_pred eCceeCcCCCCCC--------------------cch---hHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHH
Confidence 9999998654321 100 11224566667787777778889999999999999999998
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccc
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVP 547 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~ 547 (782)
+... ..+ +||++++ .++++.|+++.+.+.++
T Consensus 243 ~~~~-------------------------~~g-~~~i~~~--~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 243 MKAQ-------------------------KSG-VYNVGYS--QARSYNEIVSILKEHLG 273 (362)
T ss_dssp TTCS-------------------------SCE-EEEESCS--CEEEHHHHHHHHHHHHC
T ss_pred HhcC-------------------------CCC-EEEeCCC--CCccHHHHHHHHHHHcC
Confidence 8642 234 9999999 89999999999999988
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-23 Score=223.07 Aligned_cols=214 Identities=14% Similarity=0.047 Sum_probs=162.9
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCc----hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRF----DAHLKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
..+..+.+|++++ +.+.+++++ +|+|||+||.+.. .....+.+++|+.||.+++++|++. ++++|||
T Consensus 38 ~~~~~~~~D~~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~ 110 (319)
T 4b8w_A 38 VFVSSKDADLTDT------AQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVS 110 (319)
T ss_dssp EECCTTTCCTTSH------HHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEE
T ss_pred cccCceecccCCH------HHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEE
Confidence 3566778999987 888888887 8999999998652 2455678999999999999999997 7999999
Q ss_pred EecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEE
Q psy16243 331 VSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAM 406 (782)
Q Consensus 331 vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~I 406 (782)
+||.++|+... ++.|+.... .+. .+....|+.||..+|+++..+ ..+++++|
T Consensus 111 ~SS~~vyg~~~~~~~~E~~~~~----------------------~~~--~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i 166 (319)
T 4b8w_A 111 CLSTCIFPDKTTYPIDETMIHN----------------------GPP--HNSNFGYSYAKRMIDVQNRAYFQQYGCTFTA 166 (319)
T ss_dssp ECCGGGSCSSCCSSBCGGGGGB----------------------SCC--CSSSHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred EcchhhcCCCCCCCcccccccc----------------------CCC--CCCcchHHHHHHHHHHHHHHHHHhhCCCEEE
Confidence 99999998643 555552100 010 011136999999999999886 34899999
Q ss_pred ecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHH----hhcCceeeeccCCCccccccchhHHH
Q psy16243 407 VRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAG----AGLGLLRSMHADPELVADMVPADNVI 482 (782)
Q Consensus 407 vRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~d~VpVDdva 482 (782)
+||+.+|||...+..+. . ++. ..++.. +..|....++++++..+++|||+|+|
T Consensus 167 lRp~~v~Gp~~~~~~~~--------------~---~~~------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 223 (319)
T 4b8w_A 167 VIPTNVFGPHDNFNIED--------------G---HVL------PGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLA 223 (319)
T ss_dssp EEECEEECTTCCCCTTT--------------S---CHH------HHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHH
T ss_pred EeeccccCCCCCCCCcc--------------c---ccc------HHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHH
Confidence 99999999876532100 0 111 123333 56777777888999999999999999
Q ss_pred HHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 483 NCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 483 ~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
++++.++.... ...+++||++++ .++|+.|+++.+.+.++..
T Consensus 224 ~a~~~~~~~~~-----------------------~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 265 (319)
T 4b8w_A 224 QLFIWVLREYN-----------------------EVEPIILSVGEE--DEVSIKEAAEAVVEAMDFH 265 (319)
T ss_dssp HHHHHHHHHCC-----------------------CSSCEEECCCGG--GCEEHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhccc-----------------------cCCceEEEecCC--CceeHHHHHHHHHHHhCCC
Confidence 99999887531 234679999999 8999999999999998854
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=222.18 Aligned_cols=261 Identities=17% Similarity=0.123 Sum_probs=186.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchh-hHHHHHHHhhcccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATK-ALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~-~~~erl~~~~~~~~f~~l~~ 250 (782)
+.++.|+|||.+|+.|..+ .+.|.. .+.+|+++.|...+. ...+.+.+...
T Consensus 25 ~~~~~vlVtGatG~iG~~l----~~~L~~---------------~g~~V~~~~r~~~~~~~~~~~~~~~~~--------- 76 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNL----LETLLK---------------LDQKVVGLDNFATGHQRNLDEVRSLVS--------- 76 (352)
T ss_dssp HSCCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEECCSSCCHHHHHHHHHHSC---------
T ss_pred ccCCeEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCCccchhhHHHHhhhcc---------
Confidence 3467899999444433332 223321 256899999864321 11122221110
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCce
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKS 327 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~ 327 (782)
.....++.++.+|++++ +++.++++++|+|||+||..... ......+++|+.||.+++++|++. ++++
T Consensus 77 --~~~~~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~ 147 (352)
T 1sb8_A 77 --EKQWSNFKFIQGDIRNL------DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQS 147 (352)
T ss_dssp --HHHHTTEEEEECCTTSH------HHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSE
T ss_pred --cccCCceEEEECCCCCH------HHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCE
Confidence 00124789999999987 88999999999999999986543 345678899999999999999987 7899
Q ss_pred EEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCc
Q psy16243 328 FVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMP 403 (782)
Q Consensus 328 fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp 403 (782)
|||+||.++|+... ++.|+... ...+.|+.||..+|.++..+. .+++
T Consensus 148 ~v~~SS~~~~~~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~g~~ 198 (352)
T 1sb8_A 148 FTYAASSSTYGDHPGLPKVEDTIG-----------------------------KPLSPYAVTKYVNELYADVFSRCYGFS 198 (352)
T ss_dssp EEEEEEGGGGTTCCCSSBCTTCCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred EEEeccHHhcCCCCCCCCCCCCCC-----------------------------CCCChhHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999998643 44444211 122789999999999998763 3899
Q ss_pred EEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHH
Q psy16243 404 VAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVIN 483 (782)
Q Consensus 404 ~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~ 483 (782)
++++||+.+|||...+.. .+. .....++..+..|....++++++..+++++|+|+|+
T Consensus 199 ~~ilRp~~v~G~~~~~~~--------------------~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ 255 (352)
T 1sb8_A 199 TIGLRYFNVFGRRQDPNG--------------------AYA---AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ 255 (352)
T ss_dssp CEEEEECCEECTTCCCCS--------------------TTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred EEEEEECceeCcCCCCCc--------------------chh---hHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHH
Confidence 999999999998654311 010 001134455566766667788999999999999999
Q ss_pred HHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcc
Q psy16243 484 CIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAV 546 (782)
Q Consensus 484 aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~ 546 (782)
+++.++.... ...+++||++++ .++|+.|+++.+.+.+
T Consensus 256 a~~~~~~~~~-----------------------~~~~~~~ni~~~--~~~s~~e~~~~i~~~~ 293 (352)
T 1sb8_A 256 ANLLAATAGL-----------------------DARNQVYNIAVG--GRTSLNQLFFALRDGL 293 (352)
T ss_dssp HHHHHHTCCG-----------------------GGCSEEEEESCS--CCEEHHHHHHHHHHHH
T ss_pred HHHHHHhccc-----------------------cCCCceEEeCCC--CCccHHHHHHHHHHHH
Confidence 9988775410 124789999998 8999999999999988
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-22 Score=218.14 Aligned_cols=216 Identities=19% Similarity=0.118 Sum_probs=156.0
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEE
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHV 331 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~v 331 (782)
.++.++.+|++++ +++.++++ ++|+|||+||..... ....+.+++|+.||.+++++|++. ++++|||+
T Consensus 58 ~~~~~~~~D~~~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~ 130 (348)
T 1ek6_A 58 RSVEFEEMDILDQ------GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFS 130 (348)
T ss_dssp CCCEEEECCTTCH------HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CceEEEECCCCCH------HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEE
Confidence 3688999999987 78888888 799999999986543 345678899999999999999986 78999999
Q ss_pred ecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC---CCCcEEE
Q psy16243 332 STAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG---AGMPVAM 406 (782)
Q Consensus 332 ST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~---~glp~~I 406 (782)
||.++|+... ++.|+... . +..+.|+.||..+|.++..+. .++++++
T Consensus 131 SS~~~~g~~~~~~~~E~~~~--------------------------~--p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~ 182 (348)
T 1ek6_A 131 SSATVYGNPQYLPLDEAHPT--------------------------G--GCTNPYGKSKFFIEEMIRDLCQADKTWNAVL 182 (348)
T ss_dssp EEGGGGCSCSSSSBCTTSCC--------------------------C--CCSSHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CcHHHhCCCCCCCcCCCCCC--------------------------C--CCCCchHHHHHHHHHHHHHHHhcCCCcceEE
Confidence 9999998642 44444210 0 112789999999999998862 3499999
Q ss_pred ecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhh--cCceeeecc------CCCccccccch
Q psy16243 407 VRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAG--LGLLRSMHA------DPELVADMVPA 478 (782)
Q Consensus 407 vRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~--~g~~~~~~~------~~~~~~d~VpV 478 (782)
+||+++|||...+..| +.. . +.. ......+.... .+....+.+ +++..+++|||
T Consensus 183 lR~~~v~G~~~~g~~g-------~~~-----~---~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v 244 (348)
T 1ek6_A 183 LRYFNPTGAHASGCIG-------EDP-----Q---GIP---NNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHV 244 (348)
T ss_dssp EEECEEECCCTTSSCC-------CCC-----S---SSC---CSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEH
T ss_pred EeeccccCCCcccccC-------cCc-----c---cch---hhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEH
Confidence 9999999985432221 000 0 000 01111222222 344334444 57889999999
Q ss_pred hHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 479 DNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 479 Ddva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+|+|++++.++..... ...+++||++++ .++|+.|+++.+.+.++..
T Consensus 245 ~Dva~a~~~~~~~~~~----------------------~~g~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 291 (348)
T 1ek6_A 245 VDLAKGHIAALRKLKE----------------------QCGCRIYNLGTG--TGYSVLQMVQAMEKASGKK 291 (348)
T ss_dssp HHHHHHHHHHHHHHTT----------------------TCCEEEEEECCS--CCEEHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHhcccc----------------------cCCceEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 9999999988865310 112489999998 8899999999999988753
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.1e-22 Score=214.89 Aligned_cols=212 Identities=18% Similarity=0.167 Sum_probs=157.3
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
+++++.+|++++ +.+.++++ ++|+|||+||..... ......+++|+.||.+++++|++. ++++|||+|
T Consensus 45 ~~~~~~~D~~~~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~S 117 (330)
T 2c20_A 45 GAKFYNGDLRDK------AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSS 117 (330)
T ss_dssp TSEEEECCTTCH------HHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred CcEEEECCCCCH------HHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeC
Confidence 688999999987 78888888 899999999987543 345678899999999999999987 789999999
Q ss_pred cceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEec
Q psy16243 333 TAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVR 408 (782)
Q Consensus 333 T~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvR 408 (782)
|.++|+... ++.|+... ...+.|+.||..+|+++..+ ..+++++|+|
T Consensus 118 s~~~~~~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilr 168 (330)
T 2c20_A 118 TAATYGEVDVDLITEETMT-----------------------------NPTNTYGETKLAIEKMLHWYSQASNLRYKIFR 168 (330)
T ss_dssp CGGGGCSCSSSSBCTTSCC-----------------------------CCSSHHHHHHHHHHHHHHHHHHTSSCEEEEEE
T ss_pred CceeeCCCCCCCCCcCCCC-----------------------------CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 999998643 44554211 11278999999999999887 3489999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCccccccc-ccchhhHHHHhhc--Cceeeecc------CCCccccccchh
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINN-HYGPTGIVAGAGL--GLLRSMHA------DPELVADMVPAD 479 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~-~~~~~~~~~~~~~--g~~~~~~~------~~~~~~d~VpVD 479 (782)
|+.+|||...+..| | ... .......+..... +....+.+ +++..+++|||+
T Consensus 169 p~~v~G~~~~~~~g-------~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~ 228 (330)
T 2c20_A 169 YFNVAGATPNGIIG-------E-------------DHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVE 228 (330)
T ss_dssp CSEEECCCTTCSSC-------C-------------CCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHH
T ss_pred cCcccCCCCcCccc-------c-------------ccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHH
Confidence 99999986433221 1 000 0111112222222 22233444 678899999999
Q ss_pred HHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 480 NVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 480 dva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
|+|++++.++..... ...+++||++++ .++|+.|+++.+.+.++..
T Consensus 229 Dva~a~~~~~~~~~~----------------------~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 274 (330)
T 2c20_A 229 DLVAAHFLGLKDLQN----------------------GGESDFYNLGNG--NGFSVKEIVDAVREVTNHE 274 (330)
T ss_dssp HHHHHHHHHHHHHHT----------------------TCCCEEEECCCT--TCBCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHhcccc----------------------CCCCCeEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 999999988865311 123689999998 8899999999999988753
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-22 Score=217.14 Aligned_cols=202 Identities=17% Similarity=0.142 Sum_probs=159.3
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc---hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF---DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.++.++.+|+++. ++.++++++|+|||+|+.... .+.....+++|+.||.+++++|++. ++++|||+||
T Consensus 43 ~~~~~~~~Dl~~~-------~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS 114 (313)
T 3ehe_A 43 EAARLVKADLAAD-------DIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTST 114 (313)
T ss_dssp TTEEEECCCTTTS-------CCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECC
T ss_pred CCcEEEECcCChH-------HHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCc
Confidence 4688999999873 456777899999999996432 2456788999999999999999987 7899999999
Q ss_pred ceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecC
Q psy16243 334 AYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRP 409 (782)
Q Consensus 334 ~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp 409 (782)
.++|+... +++|+... ...+.|+.||..+|.++..+ ..|++++|+||
T Consensus 115 ~~vyg~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp 165 (313)
T 3ehe_A 115 STVYGEAKVIPTPEDYPT-----------------------------HPISLYGASKLACEALIESYCHTFDMQAWIYRF 165 (313)
T ss_dssp GGGGCSCSSSSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred hHHhCcCCCCCCCCCCCC-----------------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEee
Confidence 99998643 44444211 11278999999999999887 35999999999
Q ss_pred CeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcC-ceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 410 SIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLG-LLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 410 ~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
+.||||...+ ++. ..++..+..+ ......++++..+++|||+|+|++++.+
T Consensus 166 ~~v~G~~~~~----------------------~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~ 217 (313)
T 3ehe_A 166 ANVIGRRSTH----------------------GVI------YDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFG 217 (313)
T ss_dssp SCEESTTCCC----------------------SHH------HHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHH
T ss_pred ccccCcCCCc----------------------ChH------HHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHH
Confidence 9999975432 111 1344444555 4455788899999999999999999998
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
+.. ...+++||++++ +++++.|+++.+.+.++..+
T Consensus 218 ~~~-------------------------~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 252 (313)
T 3ehe_A 218 LRG-------------------------DERVNIFNIGSE--DQIKVKRIAEIVCEELGLSP 252 (313)
T ss_dssp TTC-------------------------CSSEEEEECCCS--CCEEHHHHHHHHHHHTTCCC
T ss_pred hcc-------------------------CCCCceEEECCC--CCeeHHHHHHHHHHHhCCCC
Confidence 862 245789999999 89999999999999988654
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=217.70 Aligned_cols=205 Identities=15% Similarity=0.082 Sum_probs=154.5
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.+++++.+|++++ + +.+++++ |+|||+||..... ......+++|+.||.+++++|++. ++++|||+||
T Consensus 43 ~~~~~~~~Dl~d~------~-~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS 113 (312)
T 3ko8_A 43 PSAELHVRDLKDY------S-WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASS 113 (312)
T ss_dssp TTSEEECCCTTST------T-TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEE
T ss_pred CCceEEECccccH------H-HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCc
Confidence 4788999999998 3 4555666 9999999964322 446678899999999999999987 7899999999
Q ss_pred ceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEecC
Q psy16243 334 AYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRP 409 (782)
Q Consensus 334 ~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvRp 409 (782)
.++|+... ++.|+... ...+.|+.||..+|+++..+. .+++++++||
T Consensus 114 ~~vyg~~~~~~~~e~~~~-----------------------------~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp 164 (312)
T 3ko8_A 114 STVYGDADVIPTPEEEPY-----------------------------KPISVYGAAKAAGEVMCATYARLFGVRCLAVRY 164 (312)
T ss_dssp GGGGCSCSSSSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred HHHhCCCCCCCCCCCCCC-----------------------------CCCChHHHHHHHHHHHHHHHHHHhCCCEEEEee
Confidence 99998753 45554211 112789999999999998873 4899999999
Q ss_pred CeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcC-ceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 410 SIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLG-LLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 410 ~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
+.+|||...+ ++ ...++..+..+ ......++++..++++||+|+|++++.+
T Consensus 165 ~~v~g~~~~~----------------------~~------~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~ 216 (312)
T 3ko8_A 165 ANVVGPRLRH----------------------GV------IYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAA 216 (312)
T ss_dssp CEEECTTCCS----------------------SH------HHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHH
T ss_pred ccccCcCCCC----------------------Ch------HHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHH
Confidence 9999975432 11 11344444444 4445778889999999999999999998
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
+..... ....+++||++++ .++++.|+++.+.+.++..+
T Consensus 217 ~~~~~~---------------------~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 255 (312)
T 3ko8_A 217 WKKFEE---------------------MDAPFLALNVGNV--DAVRVLDIAQIVAEVLGLRP 255 (312)
T ss_dssp HHHHHH---------------------SCCSEEEEEESCS--SCEEHHHHHHHHHHHHTCCC
T ss_pred HHhccc---------------------cCCCCcEEEEcCC--CceeHHHHHHHHHHHhCCCC
Confidence 876210 0245789999999 89999999999999987654
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=224.02 Aligned_cols=262 Identities=18% Similarity=0.084 Sum_probs=180.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeeccc-ceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAH-LKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~-~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
..++.|+|||.+|+.|..+ .+.|.. .+ .+|+++.|...... +. +.
T Consensus 30 ~~~~~ilVtGatG~iG~~l----~~~L~~---------------~g~~~V~~~~r~~~~~~--~~------------l~- 75 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNL----VKRLLE---------------LGVNQVHVVDNLLSAEK--IN------------VP- 75 (377)
T ss_dssp GTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCSEEEEECCCTTCCG--GG------------SC-
T ss_pred hCCCEEEEECCccHHHHHH----HHHHHH---------------cCCceEEEEECCCCCch--hh------------cc-
Confidence 3467899999444444333 223322 14 78899988643211 00 00
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCce
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKS 327 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~ 327 (782)
...+++++.+|++++ +++.++++++|+|||+||..... .+..+.+++|+.||.+++++|++.+++++
T Consensus 76 ----~~~~v~~~~~Dl~d~------~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~ 145 (377)
T 2q1s_A 76 ----DHPAVRFSETSITDD------ALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKK 145 (377)
T ss_dssp ----CCTTEEEECSCTTCH------HHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCE
T ss_pred ----CCCceEEEECCCCCH------HHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 124788999999987 88999999999999999987643 34567889999999999999987546899
Q ss_pred EEEEecceeccCCC--ccc--ccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CC
Q psy16243 328 FVHVSTAYSNCRQP--IIE--ERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AG 401 (782)
Q Consensus 328 fV~vST~~v~~~~~--~i~--E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~g 401 (782)
|||+||.++|+... ++. |+.... |. ....+.|+.||..+|.++..+. .+
T Consensus 146 ~V~~SS~~vyg~~~~~~~~~~E~~~~~-----------------------~~--~~~~~~Y~~sK~~~E~~~~~~~~~~g 200 (377)
T 2q1s_A 146 VVYSAAGCSIAEKTFDDAKATEETDIV-----------------------SL--HNNDSPYSMSKIFGEFYSVYYHKQHQ 200 (377)
T ss_dssp EEEEEEC--------------CCCCCC-----------------------CS--SCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEeCCHHHcCCCCCCCcCcccccccc-----------------------cc--cCCCCchHHHHHHHHHHHHHHHHHhC
Confidence 99999999998643 333 432000 00 0112789999999999998873 38
Q ss_pred CcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccc-----cchhhHHHHhhcCceeeeccCCCcccccc
Q psy16243 402 MPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNH-----YGPTGIVAGAGLGLLRSMHADPELVADMV 476 (782)
Q Consensus 402 lp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~d~V 476 (782)
++++++||+.||||...+.+| .|.... .....++..+..|....++++++..+++|
T Consensus 201 i~~~ilRp~~v~G~~~~~~~g-------------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i 261 (377)
T 2q1s_A 201 LPTVRARFQNVYGPGEILGAG-------------------RWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFI 261 (377)
T ss_dssp CCEEEEEECCEECTTCCTTCS-------------------SCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCE
T ss_pred CCEEEEeeccEECCCCccccc-------------------ccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeE
Confidence 999999999999986532221 122110 11223555566676656678888999999
Q ss_pred chhHHHHH-HHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 477 PADNVINC-IISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 477 pVDdva~a-ii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+|+|+|++ ++.++... ..+ +||++++ +++++.|+++.+.+.++..
T Consensus 262 ~v~Dva~a~i~~~~~~~-------------------------~~g-~~~i~~~--~~~s~~e~~~~i~~~~g~~ 307 (377)
T 2q1s_A 262 FVEDVANGLIACAADGT-------------------------PGG-VYNIASG--KETSIADLATKINEITGNN 307 (377)
T ss_dssp EHHHHHHHHHHHHHHCC-------------------------TTE-EEECCCC--CCEEHHHHHHHHHHHHTCC
T ss_pred EHHHHHHHHHHHHHhcC-------------------------CCC-eEEecCC--CceeHHHHHHHHHHHhCCC
Confidence 99999999 88887542 235 9999998 8999999999999988754
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-22 Score=216.68 Aligned_cols=203 Identities=12% Similarity=0.056 Sum_probs=157.3
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
++.++.+|++++ +++.+++++ +|+|||+||..... +.....+++|+.||.+++++|+++++.++|||+|
T Consensus 52 ~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S 125 (321)
T 2pk3_A 52 NVEMISLDIMDS------QRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIG 125 (321)
T ss_dssp TEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred eeeEEECCCCCH------HHHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEc
Confidence 577899999987 888888876 89999999986543 2466789999999999999998765689999999
Q ss_pred cceeccCC----CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEE
Q psy16243 333 TAYSNCRQ----PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAM 406 (782)
Q Consensus 333 T~~v~~~~----~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~I 406 (782)
|.++|+.. .++.|+... ...+.|+.||+.+|.++..+. .|+++++
T Consensus 126 S~~v~g~~~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~i 176 (321)
T 2pk3_A 126 SSEEYGMILPEESPVSEENQL-----------------------------RPMSPYGVSKASVGMLARQYVKAYGMDIIH 176 (321)
T ss_dssp EGGGTBSCCGGGCSBCTTSCC-----------------------------BCCSHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred cHHhcCCCCCCCCCCCCCCCC-----------------------------CCCCccHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 99999854 244444211 122789999999999998873 3899999
Q ss_pred ecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhc---C--ceeeeccCCCccccccchhHH
Q psy16243 407 VRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGL---G--LLRSMHADPELVADMVPADNV 481 (782)
Q Consensus 407 vRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~---g--~~~~~~~~~~~~~d~VpVDdv 481 (782)
+||+.+|||...+. ++. ..++..+.. | ......++++...++++++|+
T Consensus 177 lrp~~v~g~~~~~~---------------------~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dv 229 (321)
T 2pk3_A 177 TRTFNHIGPGQSLG---------------------FVT------QDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDI 229 (321)
T ss_dssp EEECEEECTTCCTT---------------------SHH------HHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHH
T ss_pred EEeCcccCcCCCCC---------------------chH------HHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHH
Confidence 99999999754321 010 123333333 5 344566778889999999999
Q ss_pred HHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 482 INCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 482 a~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
|++++.++... ..+++||++++ .++++.|+++.+.+.++..
T Consensus 230 a~a~~~~~~~~-------------------------~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 270 (321)
T 2pk3_A 230 VQAYWLLSQYG-------------------------KTGDVYNVCSG--IGTRIQDVLDLLLAMANVK 270 (321)
T ss_dssp HHHHHHHHHHC-------------------------CTTCEEEESCS--CEEEHHHHHHHHHHHSSSC
T ss_pred HHHHHHHHhCC-------------------------CCCCeEEeCCC--CCeeHHHHHHHHHHHhCCC
Confidence 99999888652 23689999998 8999999999999988753
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=227.07 Aligned_cols=263 Identities=15% Similarity=0.078 Sum_probs=177.1
Q ss_pred CCCeeEeeccccCCCCCCChhh-HHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 173 LSKMVAVTGDCLKPGVGINSED-RQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~-~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..++|+||| |+|+.|.. .+.|. ..+.+|+++.|........+++.+.+... |+...
T Consensus 68 ~~~~vlVTG-----atG~iG~~l~~~L~---------------~~g~~V~~~~R~~~~~~~~~~l~~~l~~~-~~~~~-- 124 (427)
T 4f6c_A 68 PLGNTLLTG-----ATGFLGAYLIEALQ---------------GYSHRIYCFIRADNEEIAWYKLMTNLNDY-FSEET-- 124 (427)
T ss_dssp CCEEEEEEC-----TTSHHHHHHHHHHT---------------TTEEEEEEEEECSSHHHHHHHHHHHHHHH-SCHHH--
T ss_pred CCCEEEEec-----CCcHHHHHHHHHHH---------------cCCCEEEEEECCCChHHHHHHHHHHHHHh-ccccc--
Confidence 367899999 55553321 12221 23678999999877555566665443321 11000
Q ss_pred CcccccceeEEecCCCC-CCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 252 CPHYLSKMVAVTGDCLK-PGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~-~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
......++.++.||+++ +.++ ...++|+|||+||...+..+....+++|+.||.+++++|.+ +.++|||
T Consensus 125 ~~~~~~~v~~v~~Dl~d~~~l~--------~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~ 194 (427)
T 4f6c_A 125 VEMMLSNIEVIVGDFECMDDVV--------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIY 194 (427)
T ss_dssp HHHHHTTEEEEEECC---CCCC--------CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEE
T ss_pred cccccCceEEEeCCCCCcccCC--------CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEE
Confidence 01123589999999999 4443 56789999999999887778888999999999999999998 6799999
Q ss_pred EecceeccCC-------CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-CCCC
Q psy16243 331 VSTAYSNCRQ-------PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-GAGM 402 (782)
Q Consensus 331 vST~~v~~~~-------~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-~~gl 402 (782)
+||.++ |.. .++.|+.. .......+.|+.||+++|.++..+ ..|+
T Consensus 195 ~SS~~~-G~~~~~~~~~~~~~E~~~--------------------------~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~ 247 (427)
T 4f6c_A 195 VSTISV-GTYFDIDTEDVTFSEADV--------------------------YKGQLLTSPYTRSKFYSELKVLEAVNNGL 247 (427)
T ss_dssp EEEGGG-GSEECSSCSCCEECTTCS--------------------------CSSCCCCSHHHHHHHHHHHHHHHHHHTTC
T ss_pred ECchHh-CCCccCCCCCcccccccc--------------------------ccCCCCCCchHHHHHHHHHHHHHHHHcCC
Confidence 999998 542 13333311 011123489999999999999987 3699
Q ss_pred cEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccc--cchhhHHHHhhcCceeeeccCCCccccccchhH
Q psy16243 403 PVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNH--YGPTGIVAGAGLGLLRSMHADPELVADMVPADN 480 (782)
Q Consensus 403 p~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDd 480 (782)
+++|+||+.|+|+...+. |..+. .....++..+..+.... .+.++..++++||+|
T Consensus 248 ~~~ivRpg~v~G~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D 304 (427)
T 4f6c_A 248 DGRIVRVGNLTSPYNGRW----------------------HMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVDT 304 (427)
T ss_dssp CEEEEEECCEESCSSSCC----------------------CCTTGGGCHHHHHHHHHHHSSEEE-HHHHTCEECCEEHHH
T ss_pred CEEEEeCCeeecCCCCCc----------------------cccCcchHHHHHHHHHHHhcCCCC-CccccceEEEeeHHH
Confidence 999999999999865431 11110 11123444444443322 234688999999999
Q ss_pred HHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhc
Q psy16243 481 VINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKA 545 (782)
Q Consensus 481 va~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~ 545 (782)
+|++++.++... ..+++||++++ ++++|.|+++.+.+.
T Consensus 305 vA~ai~~~~~~~-------------------------~~g~~~~l~~~--~~~s~~el~~~i~~~ 342 (427)
T 4f6c_A 305 TARQIVALAQVN-------------------------TPQIIYHVLSP--NKMPVKSLLECVKRK 342 (427)
T ss_dssp HHHHHHHHTTSC-------------------------CCCSEEEESCS--CCEEHHHHHHHHHSS
T ss_pred HHHHHHHHHcCC-------------------------CCCCEEEecCC--CCCcHHHHHHHHHHc
Confidence 999999988653 25789999999 899999999999983
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-22 Score=216.57 Aligned_cols=204 Identities=20% Similarity=0.146 Sum_probs=157.6
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.++.++.+|++++ +.+.+++.++|+|||+||..... ......+++|+.||.+++++|.+.+..++|||+||
T Consensus 54 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (336)
T 2hun_A 54 PRYTFVKGDVADY------ELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVST 127 (336)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CceEEEEcCCCCH------HHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecc
Confidence 4788999999987 78888889999999999986543 34457889999999999999998743479999999
Q ss_pred ceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecC
Q psy16243 334 AYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRP 409 (782)
Q Consensus 334 ~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp 409 (782)
.++||... ++.|+... ...+.|+.||..+|+++..+ ..+++++++||
T Consensus 128 ~~vyg~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp 178 (336)
T 2hun_A 128 DEVYGDILKGSFTENDRL-----------------------------MPSSPYSATKAASDMLVLGWTRTYNLNASITRC 178 (336)
T ss_dssp GGGGCCCSSSCBCTTBCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHCCCCCCCcCCCCCC-----------------------------CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEee
Confidence 99998642 44444211 11278999999999999886 34899999999
Q ss_pred CeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhh
Q psy16243 410 SIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAA 489 (782)
Q Consensus 410 ~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~ 489 (782)
+.||||...+. +. ...++..+..|....+.++++...++++++|+|++++.++
T Consensus 179 ~~v~g~~~~~~---------------------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~ 231 (336)
T 2hun_A 179 TNNYGPYQFPE---------------------KL------IPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVL 231 (336)
T ss_dssp CEEESTTCCTT---------------------SH------HHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHH
T ss_pred eeeeCcCCCcC---------------------ch------HHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHH
Confidence 99999754320 00 1134445556655556778888999999999999999887
Q ss_pred hhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 490 WNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
... ..+++||++++ .++++.|+++.+.+.++..
T Consensus 232 ~~~-------------------------~~g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 264 (336)
T 2hun_A 232 LKG-------------------------ESREIYNISAG--EEKTNLEVVKIILRLMGKG 264 (336)
T ss_dssp HHC-------------------------CTTCEEEECCS--CEECHHHHHHHHHHHTTCC
T ss_pred hCC-------------------------CCCCEEEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 542 24689999998 8899999999999988764
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-22 Score=217.01 Aligned_cols=258 Identities=14% Similarity=0.039 Sum_probs=181.4
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
+...++.|+|||.+|+.|..+ .+.|.. .+.+|+++.|...... .+++....
T Consensus 10 ~~~~~~~vlVTGatG~iG~~l----~~~L~~---------------~g~~V~~~~r~~~~~~-~~~~~~~~--------- 60 (335)
T 1rpn_A 10 HGSMTRSALVTGITGQDGAYL----AKLLLE---------------KGYRVHGLVARRSSDT-RWRLRELG--------- 60 (335)
T ss_dssp -----CEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEECCCSSCC-CHHHHHTT---------
T ss_pred ccccCCeEEEECCCChHHHHH----HHHHHH---------------CCCeEEEEeCCCcccc-ccchhhcc---------
Confidence 445578899999444433332 223322 2578999999754211 11222110
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccC
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQ 324 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~ 324 (782)
...++.++.+|++++ +++.+++++ +|+|||+||..... ......+++|+.||.+++++|++. +
T Consensus 61 -----~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~ 128 (335)
T 1rpn_A 61 -----IEGDIQYEDGDMADA------CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-S 128 (335)
T ss_dssp -----CGGGEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-C
T ss_pred -----ccCceEEEECCCCCH------HHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-C
Confidence 124788999999987 788888886 59999999976542 356678899999999999999987 5
Q ss_pred C-ceEEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--
Q psy16243 325 L-KSFVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG-- 399 (782)
Q Consensus 325 ~-~~fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~-- 399 (782)
+ ++|||+||.++|+... ++.|+... ...+.|+.||..+|.++..+.
T Consensus 129 ~~~~~v~~SS~~v~g~~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~e~~~~~~~~~ 179 (335)
T 1rpn_A 129 PETRFYQASTSEMFGLIQAERQDENTPF-----------------------------YPRSPYGVAKLYGHWITVNYRES 179 (335)
T ss_dssp TTSEEEEEEEGGGGCSCSSSSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCHHHhCCCCCCCCCcccCC-----------------------------CCCChhHHHHHHHHHHHHHHHHH
Confidence 5 8999999999998643 44444211 112789999999999998873
Q ss_pred CCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCcee-eeccCCCccccccch
Q psy16243 400 AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLR-SMHADPELVADMVPA 478 (782)
Q Consensus 400 ~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~d~VpV 478 (782)
.+++++++||+.+|||...+ ++... ....++..+..|... ...++++..++++||
T Consensus 180 ~~~~~~i~r~~~v~Gp~~~~----------------------~~~~~--~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v 235 (335)
T 1rpn_A 180 FGLHASSGILFNHESPLRGI----------------------EFVTR--KVTDAVARIKLGKQQELRLGNVDAKRDWGFA 235 (335)
T ss_dssp HCCCEEEEEECCEECTTSCT----------------------TSHHH--HHHHHHHHHHTTSCSCEEESCTTCEEECEEH
T ss_pred cCCcEEEEeeCcccCCCCCC----------------------CcchH--HHHHHHHHHHcCCCceEEeCCCcceeceEEH
Confidence 38999999999999975432 11100 011344445566533 356788999999999
Q ss_pred hHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 479 DNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 479 Ddva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+|+|++++.++... ..++||++++ .++|+.|+++.+.+.++..
T Consensus 236 ~Dva~a~~~~~~~~--------------------------~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 278 (335)
T 1rpn_A 236 GDYVEAMWLMLQQD--------------------------KADDYVVATG--VTTTVRDMCQIAFEHVGLD 278 (335)
T ss_dssp HHHHHHHHHHHHSS--------------------------SCCCEEECCS--CEEEHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHhcC--------------------------CCCEEEEeCC--CCccHHHHHHHHHHHhCCC
Confidence 99999999988642 1379999998 8899999999999988763
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=218.10 Aligned_cols=213 Identities=15% Similarity=0.084 Sum_probs=154.8
Q ss_pred eeEEecCCCCCCCCCCHHhHHHHhc--C-ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 259 MVAVTGDCLKPGVGINSEDRQTLVD--N-IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 259 v~~i~gDi~~~~lGl~~~~~~~l~~--~-vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
+.++.+|++++ +.+.++++ + +|+|||+||..... ......+++|+.||.+++++|++. ++++|||+|
T Consensus 71 ~~~~~~Dl~d~------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~S 143 (397)
T 1gy8_A 71 AALEVGDVRNE------DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSS 143 (397)
T ss_dssp CEEEESCTTCH------HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred EEEEECCCCCH------HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEEC
Confidence 88999999987 78888887 6 99999999987643 355678999999999999999987 789999999
Q ss_pred cceeccCCC---------cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CC
Q psy16243 333 TAYSNCRQP---------IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AG 401 (782)
Q Consensus 333 T~~v~~~~~---------~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~g 401 (782)
|+++++... ++.|+ .+. ...+.|+.||+.+|+++..+. .+
T Consensus 144 S~~v~g~~~~~~~~~~~~~~~E~--------------------------~~~---~p~~~Y~~sK~~~e~~~~~~~~~~g 194 (397)
T 1gy8_A 144 SAAIFGNPTMGSVSTNAEPIDIN--------------------------AKK---SPESPYGESKLIAERMIRDCAEAYG 194 (397)
T ss_dssp EGGGTBSCCC-----CCCCBCTT--------------------------SCC---BCSSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHhCCCCcccccccccCcCcc--------------------------CCC---CCCCchHHHHHHHHHHHHHHHHHHC
Confidence 999987542 22222 111 122789999999999998873 38
Q ss_pred CcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccc-cccchhhHHH-----HhhcCc------------ee
Q psy16243 402 MPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWIN-NHYGPTGIVA-----GAGLGL------------LR 463 (782)
Q Consensus 402 lp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~-~~~~~~~~~~-----~~~~g~------------~~ 463 (782)
++++++||+.||||...+..| +.. ........+. .+..|. ..
T Consensus 195 i~~~ilRp~~v~G~~~~~~~g--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (397)
T 1gy8_A 195 IKGICLRYFNACGAHEDGDIG--------------------EHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRM 254 (397)
T ss_dssp CEEEEEEECEEECCCTTSSCS--------------------CCSTTCCSHHHHHHHHHHHHHSCC-----------CCCE
T ss_pred CcEEEEeccceeCCCcccccc--------------------ccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCc
Confidence 999999999999986543321 110 0011111222 333443 22
Q ss_pred eecc------CCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcc---eEEEeecCCCCccc
Q psy16243 464 SMHA------DPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDI---EIYNYVSSTQKPIK 534 (782)
Q Consensus 464 ~~~~------~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~vyni~~~~~~~~t 534 (782)
.+++ +++..+++|||+|+|++++.++...... . ..... ++||++++ +++|
T Consensus 255 ~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~------------------~-~~~~~~~~~~~ni~~~--~~~s 313 (397)
T 1gy8_A 255 PIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKL------------------G-PNDKSKYFSVFNLGTS--RGYS 313 (397)
T ss_dssp EEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTC------------------C-TTTGGGSEEEEEESCS--CCEE
T ss_pred eeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhccccc------------------c-cccccCCCcEEEeCCC--Cccc
Confidence 3444 6788999999999999999988653100 0 00023 89999998 8899
Q ss_pred HHHHHHHHHhcccc
Q psy16243 535 WKEFMALNEKAVPE 548 (782)
Q Consensus 535 ~~el~~~i~~~~~~ 548 (782)
+.|+++.+.+.++.
T Consensus 314 ~~e~~~~i~~~~g~ 327 (397)
T 1gy8_A 314 VREVIEVARKTTGH 327 (397)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999998775
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=215.33 Aligned_cols=230 Identities=10% Similarity=0.082 Sum_probs=170.1
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
++.|+||| .|+.|..+ .+.|... +.+|+++.|....
T Consensus 3 ~~~ilVtG-aG~iG~~l----~~~L~~~---------------g~~V~~~~r~~~~------------------------ 38 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLEL----ARRLTAQ---------------GHEVTGLRRSAQP------------------------ 38 (286)
T ss_dssp CCCEEEEC-CSHHHHHH----HHHHHHT---------------TCCEEEEECTTSC------------------------
T ss_pred CCcEEEEC-CCHHHHHH----HHHHHHC---------------CCEEEEEeCCccc------------------------
Confidence 46799999 46666554 2334322 5688999886431
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcC-ceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDN-IHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~-vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
...+++++.+|++++ +++.+++++ +|+|||+||.. ........++|+.||.+++++|++. ++++|||+|
T Consensus 39 -~~~~~~~~~~Dl~d~------~~~~~~~~~~~d~vih~a~~~--~~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~S 108 (286)
T 3gpi_A 39 -MPAGVQTLIADVTRP------DTLASIVHLRPEILVYCVAAS--EYSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVS 108 (286)
T ss_dssp -CCTTCCEEECCTTCG------GGCTTGGGGCCSEEEECHHHH--HHC-----CCSHHHHHHHHHHTTTS-CCCEEEEEE
T ss_pred -cccCCceEEccCCCh------HHHHHhhcCCCCEEEEeCCCC--CCCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEc
Confidence 014788999999987 677778877 99999999874 3455678899999999999999985 789999999
Q ss_pred cceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCC
Q psy16243 333 TAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPS 410 (782)
Q Consensus 333 T~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~ 410 (782)
|.++|+... ++.|+... ...+.|+.||..+|++ ..+ ++++|+||+
T Consensus 109 S~~vyg~~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~E~~-~~~---~~~~ilR~~ 155 (286)
T 3gpi_A 109 STGVYGQEVEEWLDEDTPP-----------------------------IAKDFSGKRMLEAEAL-LAA---YSSTILRFS 155 (286)
T ss_dssp EGGGCCCCCSSEECTTSCC-----------------------------CCCSHHHHHHHHHHHH-GGG---SSEEEEEEC
T ss_pred ccEEEcCCCCCCCCCCCCC-----------------------------CCCChhhHHHHHHHHH-Hhc---CCeEEEecc
Confidence 999998753 44554211 1127899999999999 665 999999999
Q ss_pred eEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhh
Q psy16243 411 IVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAW 490 (782)
Q Consensus 411 ~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 490 (782)
.+|||... .++..+.. ....++++...++|+++|+|++++.++.
T Consensus 156 ~v~G~~~~---------------------------------~~~~~~~~---~~~~~~~~~~~~~i~v~Dva~~~~~~~~ 199 (286)
T 3gpi_A 156 GIYGPGRL---------------------------------RMIRQAQT---PEQWPARNAWTNRIHRDDGAAFIAYLIQ 199 (286)
T ss_dssp EEEBTTBC---------------------------------HHHHHTTC---GGGSCSSBCEECEEEHHHHHHHHHHHHH
T ss_pred cccCCCch---------------------------------hHHHHHHh---cccCCCcCceeEEEEHHHHHHHHHHHHh
Confidence 99997432 12222222 1223678889999999999999999987
Q ss_pred hccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 491 NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
... ....+++||++++ +++|+.|+++.+.+.++..+
T Consensus 200 ~~~----------------------~~~~~~~~~~~~~--~~~s~~e~~~~i~~~~g~~~ 235 (286)
T 3gpi_A 200 QRS----------------------HAVPERLYIVTDN--QPLPVHDLLRWLADRQGIAY 235 (286)
T ss_dssp HHT----------------------TSCCCSEEEECCS--CCEEHHHHHHHHHHHTTCCC
T ss_pred hhc----------------------cCCCCceEEEeCC--CCCCHHHHHHHHHHHcCCCC
Confidence 631 0245789999998 89999999999999988643
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-22 Score=219.13 Aligned_cols=252 Identities=15% Similarity=0.025 Sum_probs=182.9
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
..+.|+|||.+|+.|..+ .+.|.. .+.+|+++.|.......
T Consensus 28 ~~~~vlVtGatG~iG~~l----~~~L~~---------------~g~~V~~~~r~~~~~~~-------------------- 68 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHI----ARRLKH---------------EGHYVIASDWKKNEHMT-------------------- 68 (379)
T ss_dssp SCCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESSCCSSSC--------------------
T ss_pred cCCeEEEECCccHHHHHH----HHHHHH---------------CCCeEEEEECCCccchh--------------------
Confidence 357899999444433332 223322 25688999986432100
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc----hhhHHHHHHhhHHHHHHHHHHHHHccCCceE
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF----DAHLKVAVSINLRATKALLEMAKEMKQLKSF 328 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~f 328 (782)
....+++++.+|++++ +++.++++++|+|||+|+.... .....+.+++|+.||.+++++|++. ++++|
T Consensus 69 -~~~~~v~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~ 140 (379)
T 2c5a_A 69 -EDMFCDEFHLVDLRVM------ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRF 140 (379)
T ss_dssp -GGGTCSEEEECCTTSH------HHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEE
T ss_pred -hccCCceEEECCCCCH------HHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEE
Confidence 0123688999999987 8899999999999999997653 3456788999999999999999987 78999
Q ss_pred EEEecceeccCCC-------cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--
Q psy16243 329 VHVSTAYSNCRQP-------IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG-- 399 (782)
Q Consensus 329 V~vST~~v~~~~~-------~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~-- 399 (782)
||+||.++|+... .+.|+... + ....+.|+.||..+|+++..+.
T Consensus 141 V~~SS~~v~~~~~~~~~~~~~~~E~~~~------------------------~---~~~~~~Y~~sK~~~E~~~~~~~~~ 193 (379)
T 2c5a_A 141 FYASSACIYPEFKQLETTNVSLKESDAW------------------------P---AEPQDAFGLEKLATEELCKHYNKD 193 (379)
T ss_dssp EEEEEGGGSCGGGSSSSSSCEECGGGGS------------------------S---BCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeehheeCCCCCCCccCCCcCcccCC------------------------C---CCCCChhHHHHHHHHHHHHHHHHH
Confidence 9999999987532 23333100 1 1122789999999999998762
Q ss_pred CCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCce-eeeccCCCccccccch
Q psy16243 400 AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLL-RSMHADPELVADMVPA 478 (782)
Q Consensus 400 ~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~VpV 478 (782)
.+++++++||+.+|||...+.. ++. .....++..+..|.. ..++++++..++++||
T Consensus 194 ~gi~~~ilrp~~v~G~~~~~~~--------------------~~~---~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v 250 (379)
T 2c5a_A 194 FGIECRIGRFHNIYGPFGTWKG--------------------GRE---KAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFI 250 (379)
T ss_dssp HCCEEEEEEECCEECTTSCCSS--------------------SCC---CHHHHHHHHHHHCSSCEEEESCSCCEECCEEH
T ss_pred HCCCEEEEEeCceeCcCCCccc--------------------ccc---cHHHHHHHHHHhCCCceEEeCCCCeeEEEEEH
Confidence 4899999999999998654322 110 011234555555543 4567888899999999
Q ss_pred hHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 479 DNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 479 Ddva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+|+|++++.++... .+++||++++ .++++.|+++.+.+.++..
T Consensus 251 ~Dva~ai~~~l~~~--------------------------~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 293 (379)
T 2c5a_A 251 DECVEGVLRLTKSD--------------------------FREPVNIGSD--EMVSMNEMAEMVLSFEEKK 293 (379)
T ss_dssp HHHHHHHHHHHHSS--------------------------CCSCEEECCC--CCEEHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHhhcc--------------------------CCCeEEeCCC--CccCHHHHHHHHHHHhCCC
Confidence 99999999888542 3578999998 8999999999999988754
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.5e-22 Score=216.69 Aligned_cols=223 Identities=18% Similarity=0.174 Sum_probs=157.8
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCc-eEEEE
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLK-SFVHV 331 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~-~fV~v 331 (782)
++.++.+|++++ +++++++++ +|+|||+||..... ...+..+++|+.||.+++++|++. +++ +|||+
T Consensus 51 ~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~ 123 (347)
T 1orr_A 51 NFEFVHGDIRNK------NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYS 123 (347)
T ss_dssp CCEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEE
T ss_pred ceEEEEcCCCCH------HHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEe
Confidence 688999999987 888899888 99999999986543 355678899999999999999987 565 99999
Q ss_pred ecceeccCCC--cccccc--cCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEE
Q psy16243 332 STAYSNCRQP--IIEERF--YEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVA 405 (782)
Q Consensus 332 ST~~v~~~~~--~i~E~~--~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~ 405 (782)
||.++|+... +..|+. +.++.. ...+++-.+ ....+.|+.||+.+|+++..+. .|++++
T Consensus 124 SS~~v~g~~~~~~~~e~~~~~~~~~~------------~~~~~e~~~---~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ 188 (347)
T 1orr_A 124 STNKVYGDLEQYKYNETETRYTCVDK------------PNGYDESTQ---LDFHSPYGCSKGAADQYMLDYARIFGLNTV 188 (347)
T ss_dssp EEGGGGTTCTTSCEEECSSCEEETTC------------TTCBCTTSC---CCCCHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred ccHHHhCCCCcCCccccccccccccc------------ccCccccCC---CCCCCchHHHHHHHHHHHHHHHHHhCCcEE
Confidence 9999998643 222210 000000 000000011 1123789999999999998873 389999
Q ss_pred EecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCc-----eeeeccCCCccccccchhH
Q psy16243 406 MVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGL-----LRSMHADPELVADMVPADN 480 (782)
Q Consensus 406 IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~d~VpVDd 480 (782)
++||+.||||...+.. +. ++. ..++..+..|. .....++++..+++++++|
T Consensus 189 ilrp~~v~g~~~~~~~--------------~~----~~~------~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D 244 (347)
T 1orr_A 189 VFRHSSMYGGRQFATY--------------DQ----GWV------GWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAED 244 (347)
T ss_dssp EEEECCEECTTCCCBT--------------TB----CHH------HHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHH
T ss_pred EEccCceeCcCCCCCC--------------cC----cHH------HHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHH
Confidence 9999999998643211 00 111 12333444443 3456788999999999999
Q ss_pred HHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 481 VINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 481 va~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+|++++.++.... ...+++||++++..+++|+.|+++.+.+.++..
T Consensus 245 va~a~~~~~~~~~-----------------------~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~ 290 (347)
T 1orr_A 245 MISLYFTALANVS-----------------------KIRGNAFNIGGTIVNSLSLLELFKLLEDYCNID 290 (347)
T ss_dssp HHHHHHHHHHTHH-----------------------HHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhccc-----------------------cCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCC
Confidence 9999998886310 124679999988323699999999999988754
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.4e-22 Score=217.95 Aligned_cols=202 Identities=18% Similarity=0.128 Sum_probs=158.6
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.++.++.+|++++ +++.++++++|+|||+||..... ...+..+++|+.||.+++++|.+. ++ +|||+||
T Consensus 54 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS 125 (348)
T 1oc2_A 54 DRVELVVGDIADA------ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVST 125 (348)
T ss_dssp SSEEEEECCTTCH------HHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEE
T ss_pred CCeEEEECCCCCH------HHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecc
Confidence 4789999999987 88999999999999999987543 234578899999999999999987 56 9999999
Q ss_pred ceeccCCC--------------cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC
Q psy16243 334 AYSNCRQP--------------IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG 399 (782)
Q Consensus 334 ~~v~~~~~--------------~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~ 399 (782)
.++|+... ++.|+ .|. ...+.|+.||+.+|+++..+.
T Consensus 126 ~~vyg~~~~~~~~~~~~~~~~~~~~E~--------------------------~~~---~~~~~Y~~sK~~~e~~~~~~~ 176 (348)
T 1oc2_A 126 DEVYGDLPLREDLPGHGEGPGEKFTAE--------------------------TNY---NPSSPYSSTKAASDLIVKAWV 176 (348)
T ss_dssp GGGGCCBCCGGGSTTTTCSTTSSBCTT--------------------------SCC---CCCSHHHHHHHHHHHHHHHHH
T ss_pred cceeCCCcccccccccccccCCCcCCC--------------------------CCC---CCCCccHHHHHHHHHHHHHHH
Confidence 99997531 22222 111 123789999999999998873
Q ss_pred --CCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccc
Q psy16243 400 --AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVP 477 (782)
Q Consensus 400 --~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~Vp 477 (782)
.+++++++||+.+|||...+. ++ ...++..+..|....+.++++...++++
T Consensus 177 ~~~gi~~~ilrp~~v~G~~~~~~---------------------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 229 (348)
T 1oc2_A 177 RSFGVKATISNCSNNYGPYQHIE---------------------KF------IPRQITNILAGIKPKLYGEGKNVRDWIH 229 (348)
T ss_dssp HHHCCEEEEEEECCEESTTCCTT---------------------SH------HHHHHHHHHHTCCCEEETTSCCEEECEE
T ss_pred HHhCCCEEEEeeceeeCCCCCcc---------------------ch------HHHHHHHHHcCCCceEecCCCceEeeEE
Confidence 389999999999999754321 10 1134445556665566788889999999
Q ss_pred hhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 478 ADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 478 VDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
++|+|++++.++... ..+++||++++ .++++.|+++.+.+.++..
T Consensus 230 v~Dva~~~~~~~~~~-------------------------~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 274 (348)
T 1oc2_A 230 TNDHSTGVWAILTKG-------------------------RMGETYLIGAD--GEKNNKEVLELILEKMGQP 274 (348)
T ss_dssp HHHHHHHHHHHHHHC-------------------------CTTCEEEECCS--CEEEHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhhCC-------------------------CCCCeEEeCCC--CCCCHHHHHHHHHHHhCCC
Confidence 999999999888542 24689999998 8999999999999988764
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.3e-22 Score=218.13 Aligned_cols=261 Identities=18% Similarity=0.064 Sum_probs=180.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.++.|+|||.+|+.|..+ .+.|.. .+.+|+++.|...... .+.+...
T Consensus 7 ~~~~~vlVtGatG~iG~~l----~~~L~~---------------~g~~V~~~~r~~~~~~---~~~~~~~---------- 54 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWL----SLWLQT---------------MGATVKGYSLTAPTVP---SLFETAR---------- 54 (357)
T ss_dssp HTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESSCSSSS---CHHHHTT----------
T ss_pred hCCCEEEEECCCchHHHHH----HHHHHh---------------CCCeEEEEeCCCcccc---hhhHhhc----------
Confidence 3467899999444444333 223322 2568999998653211 1111000
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCc
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLK 326 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~ 326 (782)
...++.++.+|++++ +++.+++++ +|+|||+||..... ......+++|+.||.+++++|.++++++
T Consensus 55 ---~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~ 125 (357)
T 1rkx_A 55 ---VADGMQSEIGDIRDQ------NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVK 125 (357)
T ss_dssp ---TTTTSEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCC
T ss_pred ---cCCceEEEEccccCH------HHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 124788999999987 788888886 89999999964322 3455788999999999999999874589
Q ss_pred eEEEEecceeccCCC---cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC----
Q psy16243 327 SFVHVSTAYSNCRQP---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG---- 399 (782)
Q Consensus 327 ~fV~vST~~v~~~~~---~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~---- 399 (782)
+|||+||.++|+... .+.|+. +. ...+.|+.||+.+|+++..+.
T Consensus 126 ~~v~~SS~~vyg~~~~~~~~~E~~--------------------------~~---~~~~~Y~~sK~~~e~~~~~~~~~~~ 176 (357)
T 1rkx_A 126 AVVNITSDKCYDNKEWIWGYRENE--------------------------AM---GGYDPYSNSKGCAELVTSSYRNSFF 176 (357)
T ss_dssp EEEEECCGGGBCCCCSSSCBCTTS--------------------------CB---CCSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred eEEEecCHHHhCCCCcCCCCCCCC--------------------------CC---CCCCccHHHHHHHHHHHHHHHHHHh
Confidence 999999999998643 333331 10 122789999999999998762
Q ss_pred -------CCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCcc
Q psy16243 400 -------AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELV 472 (782)
Q Consensus 400 -------~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 472 (782)
.+++++++||+.||||...+.. + ....++..+..|....+ ++++..
T Consensus 177 ~~~~~~~~gi~~~~lrp~~v~G~~~~~~~--------------------~------~~~~~~~~~~~g~~~~~-~~~~~~ 229 (357)
T 1rkx_A 177 NPANYGQHGTAVATVRAGNVIGGGDWALD--------------------R------IVPDILRAFEQSQPVII-RNPHAI 229 (357)
T ss_dssp CGGGHHHHCCEEEEEECCCEECTTCCCSS--------------------C------HHHHHHHHHHTTCCEEC-SCTTCE
T ss_pred hhhccccCCceEEEEeeceeeCCCCCccc--------------------c------HHHHHHHHHhcCCCEEE-CCCCCe
Confidence 2899999999999997542111 1 11134555556655444 356788
Q ss_pred ccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 473 ADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 473 ~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+++|||+|+|++++.++...... ....+++||++++...++|+.|+++.+.+.++..
T Consensus 230 ~~~v~v~Dva~a~~~~~~~~~~~--------------------~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~ 286 (357)
T 1rkx_A 230 RPWQHVLEPLSGYLLLAQKLYTD--------------------GAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEG 286 (357)
T ss_dssp ECCEETHHHHHHHHHHHHHHHHT--------------------CGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTT
T ss_pred eccEeHHHHHHHHHHHHHhhhhc--------------------CCCCCceEEECCCCCCcccHHHHHHHHHHHhCCC
Confidence 99999999999999887642000 0124679999974226899999999999988753
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=212.12 Aligned_cols=220 Identities=14% Similarity=0.090 Sum_probs=161.5
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc---hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF---DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.+++++.+|++++. +.++++++++|+|||+||.... .....+.+++|+.|+.+++++|++. + ++|||+||
T Consensus 45 ~~~~~~~~D~~~~~-----~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS 117 (345)
T 2bll_A 45 PHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPST 117 (345)
T ss_dssp TTEEEEECCTTTCS-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECC
T ss_pred CCeEEEeccccCcH-----HHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEec
Confidence 47889999999851 5677888899999999997653 2455678899999999999999987 5 89999999
Q ss_pred ceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEecC
Q psy16243 334 AYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRP 409 (782)
Q Consensus 334 ~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvRp 409 (782)
.++|+... .+.|+....+.. | .....+.|+.||..+|+++..+. .+++++++||
T Consensus 118 ~~v~g~~~~~~~~e~~~~~~~~--------------------~--~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp 175 (345)
T 2bll_A 118 SEVYGMCSDKYFDEDHSNLIVG--------------------P--VNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRP 175 (345)
T ss_dssp GGGGBTCCCSSBCTTTCCCBCC--------------------C--TTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred HHHcCCCCCCCcCCcccccccC--------------------c--ccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99998643 344442110000 0 00112689999999999998763 4899999999
Q ss_pred CeEEeccCCCCcccccccCCcccccccCCCccccccc-ccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 410 SIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINN-HYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 410 ~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
+.+|||...+.. .+... ......++..+..|....+.++++..+++++|+|+|++++.+
T Consensus 176 ~~v~G~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~ 235 (345)
T 2bll_A 176 FNWMGPRLDNLN--------------------AARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRI 235 (345)
T ss_dssp CSEECSSCCCTT--------------------CSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHH
T ss_pred CcccCCCccccc--------------------ccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHH
Confidence 999998654321 00000 001123555566776666778888999999999999999998
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCC-cccHHHHHHHHHhccccc
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQK-PIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~-~~t~~el~~~i~~~~~~~ 549 (782)
+..... ...+++||++++ . ++|+.|+++.+.+.++..
T Consensus 236 ~~~~~~----------------------~~~g~~~~i~~~--~~~~s~~e~~~~i~~~~g~~ 273 (345)
T 2bll_A 236 IENAGN----------------------RCDGEIINIGNP--ENEASIEELGEMLLASFEKH 273 (345)
T ss_dssp HHCGGG----------------------TTTTEEEEECCT--TSEEEHHHHHHHHHHHHHTC
T ss_pred Hhhccc----------------------cCCCceEEeCCC--CCCCCHHHHHHHHHHHhCCC
Confidence 865310 124689999987 5 899999999999987754
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.7e-22 Score=219.25 Aligned_cols=223 Identities=14% Similarity=0.078 Sum_probs=156.8
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCchh---hH---HHHHHhhHHHHHHHHHHHHHccCC-ce
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFDA---HL---KVAVSINLRATKALLEMAKEMKQL-KS 327 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~~---~~---~~~~~~Nv~gt~~Lle~a~~~~~~-~~ 327 (782)
.+++++.+|++++ +++.+++++ +|+|||+||...... +. ...+++|+.||.+++++|++. +. ++
T Consensus 77 ~~v~~~~~Dl~d~------~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~~ 149 (404)
T 1i24_A 77 KSIELYVGDICDF------EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GEECH 149 (404)
T ss_dssp CCCEEEESCTTSH------HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCE
T ss_pred CceEEEECCCCCH------HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-CCCcE
Confidence 4788999999987 788888887 999999999765321 12 247789999999999999987 55 69
Q ss_pred EEEEecceeccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcE
Q psy16243 328 FVHVSTAYSNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPV 404 (782)
Q Consensus 328 fV~vST~~v~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~ 404 (782)
|||+||.++|+... ++.|+..+.. +...+...+ .+....+.|+.||+.+|.++..+. .|+++
T Consensus 150 ~V~~SS~~vyg~~~~~~~E~~~~~~--------------~~~~~~~~~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~ 214 (404)
T 1i24_A 150 LVKLGTMGEYGTPNIDIEEGYITIT--------------HNGRTDTLP-YPKQASSFYHLSKVHDSHNIAFTCKAWGIRA 214 (404)
T ss_dssp EEEECCGGGGCCCSSCBCSSEEEEE--------------ETTEEEEEE-CCCCCCSHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred EEEeCcHHHhCCCCCCCCccccccc--------------ccccccccc-CCCCCCChhHHHHHHHHHHHHHHHHhcCCeE
Confidence 99999999998643 3444311000 000000000 011223789999999999988763 38999
Q ss_pred EEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccc-------cchhhHHHHhhcCceeeeccCCCccccccc
Q psy16243 405 AMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNH-------YGPTGIVAGAGLGLLRSMHADPELVADMVP 477 (782)
Q Consensus 405 ~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~d~Vp 477 (782)
+++||+.||||...+.. ..| +|.... .....++..+..|....+.++++..+++||
T Consensus 215 ~ivrp~~v~Gp~~~~~~------~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~ 277 (404)
T 1i24_A 215 TDLNQGVVYGVKTDETE------MHE-----------ELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLD 277 (404)
T ss_dssp EEEEECEEECSCCTTGG------GSG-----------GGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEE
T ss_pred EEEecceeeCCCCCccc------ccc-----------ccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEE
Confidence 99999999998754310 000 111110 112345666667776667788899999999
Q ss_pred hhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcc--eEEEeecCCCCcccHHHHHHHHHhc
Q psy16243 478 ADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDI--EIYNYVSSTQKPIKWKEFMALNEKA 545 (782)
Q Consensus 478 VDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~vyni~~~~~~~~t~~el~~~i~~~ 545 (782)
|+|+|++++.++... ...+ ++||+++ .++|+.|+++.+.+.
T Consensus 278 v~Dva~a~~~~l~~~------------------------~~~g~~~~yni~~---~~~s~~e~~~~i~~~ 320 (404)
T 1i24_A 278 IRDTVQCVEIAIANP------------------------AKAGEFRVFNQFT---EQFSVNELASLVTKA 320 (404)
T ss_dssp HHHHHHHHHHHHHSC------------------------CCTTCEEEEEECS---EEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc------------------------ccCCCceEEEECC---CCCcHHHHHHHHHHH
Confidence 999999999988653 1123 7999976 579999999999987
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=211.86 Aligned_cols=203 Identities=19% Similarity=0.109 Sum_probs=160.5
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.++.++.+|++++ +++.+++.++|+|||+||..... ...+..+++|+.||.+++++|.+. ++++|||+||
T Consensus 55 ~~~~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS 127 (337)
T 1r6d_A 55 PRLRFVHGDIRDA------GLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVST 127 (337)
T ss_dssp TTEEEEECCTTCH------HHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEE
T ss_pred CCeEEEEcCCCCH------HHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecc
Confidence 4788999999987 88999999999999999986543 344578899999999999999987 7899999999
Q ss_pred ceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEecC
Q psy16243 334 AYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRP 409 (782)
Q Consensus 334 ~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvRp 409 (782)
.++|+... ++.|+... ...+.|+.||..+|+++..+. .+++++++||
T Consensus 128 ~~vyg~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp 178 (337)
T 1r6d_A 128 NQVYGSIDSGSWTESSPL-----------------------------EPNSPYAASKAGSDLVARAYHRTYGLDVRITRC 178 (337)
T ss_dssp GGGGCCCSSSCBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred hHHhCCCCCCCCCCCCCC-----------------------------CCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 99998642 34443111 112789999999999998763 4899999999
Q ss_pred CeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhh
Q psy16243 410 SIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAA 489 (782)
Q Consensus 410 ~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~ 489 (782)
+.+|||...+. ++ ...++..+..|....+.++++...++++++|+|++++.++
T Consensus 179 ~~v~G~~~~~~---------------------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 231 (337)
T 1r6d_A 179 CNNYGPYQHPE---------------------KL------IPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVL 231 (337)
T ss_dssp CEEECTTCCTT---------------------SH------HHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred eeeECCCCCCC---------------------Ch------HHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHH
Confidence 99999764320 10 1134455556655556788889999999999999999887
Q ss_pred hhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 490 WNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
... ..+++||++++ .++|+.|+++.+.+.++..
T Consensus 232 ~~~-------------------------~~g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 264 (337)
T 1r6d_A 232 AGG-------------------------RAGEIYHIGGG--LELTNRELTGILLDSLGAD 264 (337)
T ss_dssp HHC-------------------------CTTCEEEECCC--CEEEHHHHHHHHHHHHTCC
T ss_pred hCC-------------------------CCCCEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 542 24689999998 8899999999999988754
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.4e-22 Score=208.88 Aligned_cols=223 Identities=12% Similarity=0.070 Sum_probs=163.2
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.+.|+|||. |+.|..+ .+.|.. .+.+|+++.|..... +.+.
T Consensus 5 ~~~ilVtGa-G~iG~~l----~~~L~~---------------~g~~V~~~~r~~~~~---~~~~---------------- 45 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVL----SRALAP---------------QGWRIIGTSRNPDQM---EAIR---------------- 45 (286)
T ss_dssp CCEEEEETC-CHHHHHH----HHHHGG---------------GTCEEEEEESCGGGH---HHHH----------------
T ss_pred cCcEEEECC-cHHHHHH----HHHHHH---------------CCCEEEEEEcChhhh---hhHh----------------
Confidence 467999994 5555443 233322 257899999975421 1111
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHc-cCCceEEEEe
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEM-KQLKSFVHVS 332 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~-~~~~~fV~vS 332 (782)
..+++++.+|+++. + ++++|+|||+|+......+ .+++++++|++. .++++|||+|
T Consensus 46 --~~~~~~~~~D~~d~------~-----~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~S 102 (286)
T 3ius_A 46 --ASGAEPLLWPGEEP------S-----LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLS 102 (286)
T ss_dssp --HTTEEEEESSSSCC------C-----CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEE
T ss_pred --hCCCeEEEeccccc------c-----cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEee
Confidence 13688999999984 1 5789999999998654322 267899999884 3789999999
Q ss_pred cceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCC
Q psy16243 333 TAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPS 410 (782)
Q Consensus 333 T~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~ 410 (782)
|.++|+... ++.|+... ...+.|+.+|+.+|+++..+ .+++++|+||+
T Consensus 103 s~~vyg~~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~E~~~~~~-~~~~~~ilRp~ 152 (286)
T 3ius_A 103 TTAVYGDHDGAWVDETTPL-----------------------------TPTAARGRWRVMAEQQWQAV-PNLPLHVFRLA 152 (286)
T ss_dssp EGGGGCCCTTCEECTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHS-TTCCEEEEEEC
T ss_pred cceecCCCCCCCcCCCCCC-----------------------------CCCCHHHHHHHHHHHHHHhh-cCCCEEEEecc
Confidence 999998754 45554211 11278999999999999998 78999999999
Q ss_pred eEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhh
Q psy16243 411 IVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAW 490 (782)
Q Consensus 411 ~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 490 (782)
.+|||...+.. .+..|....+.++ +..+++||++|+|++++.++.
T Consensus 153 ~v~G~~~~~~~----------------------------------~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~ 197 (286)
T 3ius_A 153 GIYGPGRGPFS----------------------------------KLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMA 197 (286)
T ss_dssp EEEBTTBSSST----------------------------------TSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHH
T ss_pred ceECCCchHHH----------------------------------HHhcCCccccCCC-CcccceEEHHHHHHHHHHHHh
Confidence 99997643321 1223433334443 578899999999999999986
Q ss_pred hccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 491 NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
.. ..+++||++++ +++++.|+++.+.+.++..+
T Consensus 198 ~~-------------------------~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 230 (286)
T 3ius_A 198 RP-------------------------DPGAVYNVCDD--EPVPPQDVIAYAAELQGLPL 230 (286)
T ss_dssp SC-------------------------CTTCEEEECCS--CCBCHHHHHHHHHHHHTCCC
T ss_pred CC-------------------------CCCCEEEEeCC--CCccHHHHHHHHHHHcCCCC
Confidence 53 24679999999 88999999999999887653
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=209.07 Aligned_cols=208 Identities=17% Similarity=0.087 Sum_probs=154.1
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch--hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD--AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
++.++.+|++++ +++.++++ ++|+|||+||..... ......+++|+.||.+++++|++. ++++|||+||
T Consensus 46 ~~~~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS 118 (312)
T 2yy7_A 46 SGPFEVVNALDF------NQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSS 118 (312)
T ss_dssp SSCEEECCTTCH------HHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEE
T ss_pred CCceEEecCCCH------HHHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecc
Confidence 467889999987 88888888 899999999975432 456678999999999999999986 7899999999
Q ss_pred ceeccCCC---cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEec
Q psy16243 334 AYSNCRQP---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVR 408 (782)
Q Consensus 334 ~~v~~~~~---~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvR 408 (782)
.++|+... +++|+... ...+.|+.||..+|+++..+. .+++++++|
T Consensus 119 ~~~~~~~~~~~~~~e~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lr 169 (312)
T 2yy7_A 119 IAVFGPTTPKENTPQYTIM-----------------------------EPSTVYGISKQAGERWCEYYHNIYGVDVRSIR 169 (312)
T ss_dssp GGGCCTTSCSSSBCSSCBC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCEEECEE
T ss_pred HHHhCCCCCCCCccccCcC-----------------------------CCCchhHHHHHHHHHHHHHHHHhcCCcEEEEe
Confidence 99998632 33343111 112789999999999998763 389999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
|+.+|||...|.. +. . ......+.....+......++++..++++||+|+|++++.+
T Consensus 170 p~~v~g~~~~~~~--------------------~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 226 (312)
T 2yy7_A 170 YPGLISWSTPPGG--------------------GT-T--DYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINI 226 (312)
T ss_dssp ECEEECSSSCCCS--------------------CT-T--THHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHH
T ss_pred CCeEecCCCCCCC--------------------ch-h--hhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHH
Confidence 9999997654321 00 0 00112222333333344667788899999999999999998
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
+...... ...+++||+++ .++|+.|+++.+.+.++.
T Consensus 227 ~~~~~~~---------------------~~~~~~~ni~~---~~~s~~e~~~~i~~~~~~ 262 (312)
T 2yy7_A 227 MKAPVEK---------------------IKIHSSYNLAA---MSFTPTEIANEIKKHIPE 262 (312)
T ss_dssp HHSCGGG---------------------CCCSSCEECCS---EEECHHHHHHHHHTTCTT
T ss_pred HhCcccc---------------------cccCceEEeCC---CccCHHHHHHHHHHHCCC
Confidence 8653110 01247999984 679999999999998873
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=208.79 Aligned_cols=200 Identities=17% Similarity=0.103 Sum_probs=140.9
Q ss_pred EecCCCCCCCCCCHHhHHHHhcC-----ceEEEEcCcccCc-hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecce
Q psy16243 262 VTGDCLKPGVGINSEDRQTLVDN-----IHVVFHCAATVRF-DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAY 335 (782)
Q Consensus 262 i~gDi~~~~lGl~~~~~~~l~~~-----vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~ 335 (782)
+.+|++++ +.++.++++ +|+|||+||.... .....+.+++|+.|+.+++++|++. ++ +|||+||.+
T Consensus 47 ~~~d~~~~------~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~ 118 (310)
T 1eq2_A 47 IADYMDKE------DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAA 118 (310)
T ss_dssp CSEEEEHH------HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGG
T ss_pred eccccccH------HHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHH
Confidence 67888776 778888875 9999999997654 3456778999999999999999987 67 999999999
Q ss_pred eccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEecCCe
Q psy16243 336 SNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRPSI 411 (782)
Q Consensus 336 v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvRp~~ 411 (782)
+|+... ++.|+... ...+.|+.||..+|.++..+. .+++++++||+.
T Consensus 119 v~g~~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~ 169 (310)
T 1eq2_A 119 TYGGRTSDFIESREYE-----------------------------KPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFN 169 (310)
T ss_dssp GGTTCCSCBCSSGGGC-----------------------------CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECE
T ss_pred HhCCCCCCCCCCCCCC-----------------------------CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 998643 44454211 112789999999999998873 489999999999
Q ss_pred EEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCc-cccccchhHHHHHHHHhhh
Q psy16243 412 VIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPEL-VADMVPADNVINCIISAAW 490 (782)
Q Consensus 412 v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~d~VpVDdva~aii~a~~ 490 (782)
+|||...+.. .. ......++..+..|....+.++++. .++++||+|+|++++.++.
T Consensus 170 v~G~~~~~~~--------------------~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~ 226 (310)
T 1eq2_A 170 VYGPREGHKG--------------------SM---ASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE 226 (310)
T ss_dssp EESSSCGGGG--------------------GG---SCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHH
T ss_pred EECcCCCCCC--------------------cc---chHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHh
Confidence 9998643211 00 0011134555566665556778888 9999999999999999886
Q ss_pred hccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 491 NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
.. . +++||++++ .++|+.|+++.+.+.++..
T Consensus 227 ~~-------------------------~-~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 227 NG-------------------------V-SGIFNLGTG--RAESFQAVADATLAYHKKG 257 (310)
T ss_dssp HC-------------------------C-CEEEEESCS--CCBCHHHHHHHC-------
T ss_pred cC-------------------------C-CCeEEEeCC--CccCHHHHHHHHHHHcCCC
Confidence 52 2 789999998 8899999999999887754
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.6e-21 Score=210.33 Aligned_cols=200 Identities=14% Similarity=0.153 Sum_probs=147.4
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch-hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEeccee
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD-AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYS 336 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~-~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v 336 (782)
+++++.+|++++ +++.++++++|+|||+||..... ....+.+++|+.||.+++++|++. ++++|||+||.++
T Consensus 57 ~~~~~~~Dl~d~------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~ 129 (342)
T 2x4g_A 57 EPECRVAEMLDH------AGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYA 129 (342)
T ss_dssp CCEEEECCTTCH------HHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGG
T ss_pred CeEEEEecCCCH------HHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHh
Confidence 688999999987 88999999999999999976532 445668899999999999999987 7899999999999
Q ss_pred ccCCC---cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC-CCCcEEEecCCeE
Q psy16243 337 NCRQP---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG-AGMPVAMVRPSIV 412 (782)
Q Consensus 337 ~~~~~---~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~-~glp~~IvRp~~v 412 (782)
|+... .+.|+... .|.. ...+.|+.||+.+|+++..+. .|++++++||+.+
T Consensus 130 ~~~~~~~~~~~E~~~~-----------------------~p~~--~~~~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v 184 (342)
T 2x4g_A 130 MPRHPQGLPGHEGLFY-----------------------DSLP--SGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMV 184 (342)
T ss_dssp SCCCTTSSCBCTTCCC-----------------------SSCC--TTSCHHHHHHHHHHHHHHHHHHTTCCEEEEEECEE
T ss_pred hCcCCCCCCCCCCCCC-----------------------Cccc--cccChHHHHHHHHHHHHHHHhhcCCcEEEEeCCce
Confidence 97643 22333111 0100 013789999999999998862 2999999999999
Q ss_pred EeccC-CCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhh
Q psy16243 413 IATNK-EPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWN 491 (782)
Q Consensus 413 ~G~~~-~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~ 491 (782)
|||.. .+ + ...++..+..|....+ ++...++++++|+|++++.++..
T Consensus 185 ~g~~~~~~----------------------~-------~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~ 232 (342)
T 2x4g_A 185 LGELDIGP----------------------T-------TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALER 232 (342)
T ss_dssp ECSCCSSC----------------------S-------TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHH
T ss_pred ECCCCccc----------------------c-------HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhC
Confidence 99753 11 0 1134445555654433 56788999999999999998865
Q ss_pred ccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 492 VHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
. ..+++||++++ . +|+.|+++.+.+.++..
T Consensus 233 ~-------------------------~~g~~~~v~~~--~-~s~~e~~~~i~~~~g~~ 262 (342)
T 2x4g_A 233 G-------------------------RIGERYLLTGH--N-LEMADLTRRIAELLGQP 262 (342)
T ss_dssp S-------------------------CTTCEEEECCE--E-EEHHHHHHHHHHHHTCC
T ss_pred C-------------------------CCCceEEEcCC--c-ccHHHHHHHHHHHhCCC
Confidence 3 12789999998 7 99999999999988754
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.6e-21 Score=228.18 Aligned_cols=329 Identities=17% Similarity=0.076 Sum_probs=208.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccch-hhHHHHHHHhhcccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRAT-KALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~-~~~~erl~~~~~~~~f~~l~~ 250 (782)
+.++.|+|||.+|++|..+ .+.|+. .+.+|+++.|.... ....+++....
T Consensus 9 ~~~~~ilVTGatG~IG~~l----~~~L~~---------------~G~~V~~~~r~~~~~~~~~~~l~~~~---------- 59 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHT----VVELIE---------------NGYDCVVADNLSNSTYDSVARLEVLT---------- 59 (699)
T ss_dssp --CCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEECCSSCCTHHHHHHHHHH----------
T ss_pred cCCCEEEEECCCCHHHHHH----HHHHHH---------------CcCEEEEEECCCcchHHHHHHHhhcc----------
Confidence 3468899999444444333 233322 15688888886432 22222222210
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCC
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQL 325 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~ 325 (782)
..++.++.+|++++ +++.++++ ++|+|||+||..... ....+.+++|+.|+.+++++|++. ++
T Consensus 60 -----~~~v~~v~~Dl~d~------~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~ 127 (699)
T 1z45_A 60 -----KHHIPFYEVDLCDR------KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NV 127 (699)
T ss_dssp -----TSCCCEEECCTTCH------HHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred -----CCceEEEEcCCCCH------HHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 13688899999987 78888888 799999999987543 234568899999999999999987 78
Q ss_pred ceEEEEecceeccCCC------cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC
Q psy16243 326 KSFVHVSTAYSNCRQP------IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG 399 (782)
Q Consensus 326 ~~fV~vST~~v~~~~~------~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~ 399 (782)
++|||+||+++|+... ++.|+. +. ...+.|+.||+++|+++..+.
T Consensus 128 ~~iV~~SS~~vyg~~~~~~~~~~~~E~~--------------------------~~---~p~~~Y~~sK~~~E~~~~~~~ 178 (699)
T 1z45_A 128 SKFVFSSSATVYGDATRFPNMIPIPEEC--------------------------PL---GPTNPYGHTKYAIENILNDLY 178 (699)
T ss_dssp CEEEEEEEGGGGCCGGGSTTCCSBCTTS--------------------------CC---CCCSHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECcHHHhCCCccccccCCccccC--------------------------CC---CCCChHHHHHHHHHHHHHHHH
Confidence 9999999999997532 233321 11 112789999999999998762
Q ss_pred ----CCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcC--ceeeecc------
Q psy16243 400 ----AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLG--LLRSMHA------ 467 (782)
Q Consensus 400 ----~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g--~~~~~~~------ 467 (782)
.+++++|+||+.+|||....+. +|... ++. ......+..+..+ ....+.+
T Consensus 179 ~~~~~g~~~~ilR~~~vyG~~~~~~~-------g~~~~--------~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 240 (699)
T 1z45_A 179 NSDKKSWKFAILRYFNPIGAHPSGLI-------GEDPL--------GIP---NNLLPYMAQVAVGRREKLYIFGDDYDSR 240 (699)
T ss_dssp HHSTTSCEEEEEEECEEECCCTTSSC-------CCCCS--------SSC---CSHHHHHHHHHTTSSSCCCCC------C
T ss_pred HhccCCCcEEEEEeccccCCCccccc-------ccccc--------cch---hHHHHHHHHHHhcCCCceEEeCCcccCC
Confidence 6899999999999997543221 11000 000 0111223333332 2223444
Q ss_pred CCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccc
Q psy16243 468 DPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVP 547 (782)
Q Consensus 468 ~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~ 547 (782)
+++..+++|||+|+|++++.++...... ......+++||++++ +++|+.|+++.+.+.++
T Consensus 241 ~g~~~~~~i~v~Dva~a~~~a~~~~~~~------------------~~~~~~~~~yni~~~--~~~s~~el~~~i~~~~g 300 (699)
T 1z45_A 241 DGTPIRDYIHVVDLAKGHIAALQYLEAY------------------NENEGLCREWNLGSG--KGSTVFEVYHAFCKASG 300 (699)
T ss_dssp CSSCEECEEEHHHHHHHHHHHHHHHHHS------------------CTTCCEEEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred CCCeeEeeEEHHHHHHHHHHHHhhhhcc------------------ccccCCceEEEECCC--CCCcHHHHHHHHHHHhC
Confidence 5788999999999999999888642100 000123579999999 88999999999999877
Q ss_pred ccCCCcceeceeeEeccchHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhccccccccccccchH
Q psy16243 548 EIPSTFAIWAYCFTLNKYKSIHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFTNFNTQ 627 (782)
Q Consensus 548 ~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~~~~~f~~~~w~f~~~n~~ 627 (782)
...... ..+.. . .... -..+..+++.+.+||+|+. .+-+-+.+. +++|..+.+.|+.++..
T Consensus 301 ~~~~~~--~~~~~-~------~~~~------~~~~d~~ka~~~LG~~p~~-~l~egl~~~---~~w~~~~~~~~~~~~~~ 361 (699)
T 1z45_A 301 IDLPYK--VTGRR-A------GDVL------NLTAKPDRAKRELKWQTEL-QVEDSCKDL---WKWTTENPFGYQLRGVE 361 (699)
T ss_dssp CCCCC------------------CC------CCCBCCHHHHHHTCCCCCC-CHHHHHHHH---HHHHHHCTTCSCCTTEE
T ss_pred CCCCce--ecCCC-C------Cccc------cccCCHHHHHHhcCCCCCC-CHHHHHHHH---HHHHHhCCcchhhhhee
Confidence 542110 00100 0 0000 0012236778889999964 344444443 45677888888888766
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-21 Score=212.60 Aligned_cols=200 Identities=17% Similarity=0.102 Sum_probs=154.7
Q ss_pred EecCCCCCCCCCCHHhHHHHhc-----CceEEEEcCcccCc-hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecce
Q psy16243 262 VTGDCLKPGVGINSEDRQTLVD-----NIHVVFHCAATVRF-DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAY 335 (782)
Q Consensus 262 i~gDi~~~~lGl~~~~~~~l~~-----~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~ 335 (782)
+.+|++++ +.++.+++ ++|+|||+||.... ....++.+++|+.||.+++++|++. ++ +|||+||.+
T Consensus 94 ~~~d~~~~------~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~~ 165 (357)
T 2x6t_A 94 IADYMDKE------DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAA 165 (357)
T ss_dssp CSEEEEHH------HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGG
T ss_pred EeeecCcH------HHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcchH
Confidence 67888876 77888887 59999999997654 3456788999999999999999987 67 999999999
Q ss_pred eccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEecCCe
Q psy16243 336 SNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRPSI 411 (782)
Q Consensus 336 v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvRp~~ 411 (782)
+|+... +++|+... ...+.|+.||..+|+++..+. .+++++++||+.
T Consensus 166 v~g~~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~ 216 (357)
T 2x6t_A 166 TYGGRTSDFIESREYE-----------------------------KPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFN 216 (357)
T ss_dssp GGCSCSSCCCSSGGGC-----------------------------CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECE
T ss_pred HhCCCCCCCcCCcCCC-----------------------------CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCe
Confidence 998643 44454211 112789999999999998873 489999999999
Q ss_pred EEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCc-cccccchhHHHHHHHHhhh
Q psy16243 412 VIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPEL-VADMVPADNVINCIISAAW 490 (782)
Q Consensus 412 v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~d~VpVDdva~aii~a~~ 490 (782)
||||...+.. ... .....++..+..|....+.++++. ..++++|+|+|++++.++.
T Consensus 217 v~Gp~~~~~~---------------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~ 273 (357)
T 2x6t_A 217 VYGPREGHKG---------------------SMA--SVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE 273 (357)
T ss_dssp EESSSCTTCG---------------------GGS--CHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHH
T ss_pred EECCCCCCCc---------------------ccc--hHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHh
Confidence 9998654211 000 011134455566665556777888 8999999999999999886
Q ss_pred hccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 491 NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
.. . +++||++++ .++++.|+++.+.+.++..
T Consensus 274 ~~-------------------------~-~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 304 (357)
T 2x6t_A 274 NG-------------------------V-SGIFNLGTG--RAESFQAVADATLAYHKKG 304 (357)
T ss_dssp HC-------------------------C-CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred cC-------------------------C-CCeEEecCC--CcccHHHHHHHHHHHcCCC
Confidence 52 2 789999998 8899999999999988754
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-21 Score=210.74 Aligned_cols=190 Identities=15% Similarity=0.091 Sum_probs=148.2
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.+++++.+|++ ++|+|||+||..... ......++ |+.||.+++++|++. ++++|||+||
T Consensus 58 ~~~~~~~~Dl~----------------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS 119 (321)
T 3vps_A 58 PVLELEERDLS----------------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGST 119 (321)
T ss_dssp CGGGCCHHHHT----------------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEE
T ss_pred CCeeEEeCccc----------------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecC
Confidence 35677777765 589999999987642 22234566 999999999999998 6999999999
Q ss_pred ceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCC-cEEEec
Q psy16243 334 AYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGM-PVAMVR 408 (782)
Q Consensus 334 ~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~gl-p~~IvR 408 (782)
.++|+... ++.|+... ...+.|+.||+.+|+++..+ ..++ +++|+|
T Consensus 120 ~~v~~~~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR 170 (321)
T 3vps_A 120 CEVYGQADTLPTPEDSPL-----------------------------SPRSPYAASKVGLEMVAGAHQRASVAPEVGIVR 170 (321)
T ss_dssp GGGGCSCSSSSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEE
T ss_pred HHHhCCCCCCCCCCCCCC-----------------------------CCCChhHHHHHHHHHHHHHHHHHcCCCceEEEE
Confidence 99998753 45554211 12289999999999999987 3588 999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
|+.+|||...+.. ....++..+..|....+.++++..+++|+++|+|++++.+
T Consensus 171 p~~v~G~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~ 223 (321)
T 3vps_A 171 FFNVYGPGERPDA---------------------------LVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVAL 223 (321)
T ss_dssp ECEEECTTCCTTS---------------------------HHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHG
T ss_pred eccccCcCCCCCC---------------------------hHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHH
Confidence 9999997644210 1124555666777777788899999999999999999998
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+... ..+ +||++++ +++++.|+++.+. .++..
T Consensus 224 ~~~~-------------------------~~g-~~~i~~~--~~~s~~e~~~~i~-~~g~~ 255 (321)
T 3vps_A 224 ANRP-------------------------LPS-VVNFGSG--QSLSVNDVIRILQ-ATSPA 255 (321)
T ss_dssp GGSC-------------------------CCS-EEEESCS--CCEEHHHHHHHHH-TTCTT
T ss_pred HhcC-------------------------CCC-eEEecCC--CcccHHHHHHHHH-HhCCC
Confidence 8653 225 9999999 8999999999999 87754
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.4e-21 Score=205.99 Aligned_cols=203 Identities=19% Similarity=0.121 Sum_probs=155.4
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
++.++.+|++++ +++.++++ ++|+|+|+||..... +.....+++|+.||.+++++|++. ++++|||+|
T Consensus 44 ~~~~~~~Dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~S 116 (311)
T 2p5y_A 44 GVPFFRVDLRDK------EGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFAS 116 (311)
T ss_dssp TCCEECCCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred CeEEEECCCCCH------HHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeC
Confidence 577899999987 78888887 799999999976543 345578899999999999999986 789999999
Q ss_pred cc-eeccC-C--CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEE
Q psy16243 333 TA-YSNCR-Q--PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAM 406 (782)
Q Consensus 333 T~-~v~~~-~--~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~I 406 (782)
|. ++|+. . .++.|+... ...+.|+.||..+|+++..+. .++++++
T Consensus 117 S~~~~~g~~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ 167 (311)
T 2p5y_A 117 TGGAIYGEVPEGERAEETWPP-----------------------------RPKSPYAASKAAFEHYLSVYGQSYGLKWVS 167 (311)
T ss_dssp EHHHHHCCCCTTCCBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred CChhhcCCCCCCCCcCCCCCC-----------------------------CCCChHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 99 88875 2 134444211 112789999999999998762 4899999
Q ss_pred ecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeec-----cCCCccccccchhHH
Q psy16243 407 VRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMH-----ADPELVADMVPADNV 481 (782)
Q Consensus 407 vRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~d~VpVDdv 481 (782)
+||+.+|||...+.. ..+ ....++..+..|....+. ++++..+++++++|+
T Consensus 168 lrp~~v~Gp~~~~~~----------------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv 223 (311)
T 2p5y_A 168 LRYGNVYGPRQDPHG----------------------EAG--VVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDV 223 (311)
T ss_dssp EEECEEECTTCCSSS----------------------TTH--HHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHH
T ss_pred EeeccccCcCCCCCC----------------------cCc--HHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHH
Confidence 999999998643211 000 011234444556555555 788889999999999
Q ss_pred HHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 482 INCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 482 a~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
|++++.++.. . +++||++++ .++|+.|+++.+.+.++..
T Consensus 224 a~a~~~~~~~--------------------------~-~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 262 (311)
T 2p5y_A 224 AEAHALALFS--------------------------L-EGIYNVGTG--EGHTTREVLMAVAEAAGKA 262 (311)
T ss_dssp HHHHHHHHHH--------------------------C-CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhC--------------------------C-CCEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 9999988753 1 679999998 8999999999999988753
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.8e-21 Score=209.54 Aligned_cols=254 Identities=15% Similarity=0.076 Sum_probs=176.3
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
...++.|+|||.+|+.|..+ .+.|.. .+.+|+++.|...+.. +.+...
T Consensus 24 ~~~~~~vlVtGatG~iG~~l----~~~L~~---------------~g~~V~~~~r~~~~~~--~~~~~~----------- 71 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHL----TDKLMM---------------DGHEVTVVDNFFTGRK--RNVEHW----------- 71 (343)
T ss_dssp ---CCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEECCSSCCG--GGTGGG-----------
T ss_pred ccCCCEEEEEcCccHHHHHH----HHHHHH---------------CCCEEEEEeCCCccch--hhhhhh-----------
Confidence 34568899999444433332 223322 1568888888643211 011000
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCce
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKS 327 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~ 327 (782)
....++.++.+|+.++. +.++|+|||+||..... ......+++|+.||.+++++|++. +. +
T Consensus 72 ---~~~~~~~~~~~D~~~~~-----------~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~ 135 (343)
T 2b69_A 72 ---IGHENFELINHDVVEPL-----------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-R 135 (343)
T ss_dssp ---TTCTTEEEEECCTTSCC-----------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-E
T ss_pred ---ccCCceEEEeCccCChh-----------hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-c
Confidence 01246889999998873 35799999999976532 345678899999999999999987 44 9
Q ss_pred EEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCc
Q psy16243 328 FVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMP 403 (782)
Q Consensus 328 fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp 403 (782)
|||+||.++|+... ++.|+..... .|. ...+.|+.||+.+|+++..+ ..+++
T Consensus 136 ~v~~SS~~v~g~~~~~~~~E~~~~~~---------------------~~~---~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 191 (343)
T 2b69_A 136 LLLASTSEVYGDPEVHPQSEDYWGHV---------------------NPI---GPRACYDEGKRVAETMCYAYMKQEGVE 191 (343)
T ss_dssp EEEEEEGGGGBSCSSSSBCTTCCCBC---------------------CSS---STTHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred EEEECcHHHhCCCCCCCCcccccccC---------------------CCC---CCCCchHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999998643 4555422100 011 11278999999999999876 34899
Q ss_pred EEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHH
Q psy16243 404 VAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVIN 483 (782)
Q Consensus 404 ~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~ 483 (782)
++++||+.+|||...+..+ + ....++..+..|....+.++++..+++++|+|+|+
T Consensus 192 ~~ilrp~~v~G~~~~~~~~-------------------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~ 246 (343)
T 2b69_A 192 VRVARIFNTFGPRMHMNDG-------------------R------VVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 246 (343)
T ss_dssp EEEEEECCEECTTCCTTCC-------------------C------HHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHH
T ss_pred EEEEEEcceeCcCCCCCcc-------------------c------HHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHH
Confidence 9999999999986433110 0 01134455566666667788899999999999999
Q ss_pred HHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 484 CIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 484 aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+++.++... .+++||++++ .++|+.|+++.+.+.++..
T Consensus 247 a~~~~~~~~--------------------------~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 284 (343)
T 2b69_A 247 GLVALMNSN--------------------------VSSPVNLGNP--EEHTILEFAQLIKNLVGSG 284 (343)
T ss_dssp HHHHHHTSS--------------------------CCSCEEESCC--CEEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHhcC--------------------------CCCeEEecCC--CCCcHHHHHHHHHHHhCCC
Confidence 998877431 2578999998 8999999999999988754
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=204.57 Aligned_cols=214 Identities=16% Similarity=0.119 Sum_probs=151.0
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
++.++.+|++++ +++.++++ ++|+|||+||..... ....+.+++|+.||.+++++|++. ++++|||+|
T Consensus 51 ~~~~~~~Dl~~~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~S 123 (338)
T 1udb_A 51 HPTFVEGDIRNE------ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSS 123 (338)
T ss_dssp CCEEEECCTTCH------HHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEE
T ss_pred cceEEEccCCCH------HHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEc
Confidence 578899999987 77888776 489999999976533 234568899999999999999886 789999999
Q ss_pred cceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC---CCCcEEEe
Q psy16243 333 TAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG---AGMPVAMV 407 (782)
Q Consensus 333 T~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~---~glp~~Iv 407 (782)
|+++|+... ++.|+... .+..+.|+.||+.+|+++..+. .+++++|+
T Consensus 124 S~~~~g~~~~~~~~e~~~~----------------------------~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~il 175 (338)
T 1udb_A 124 SATVYGDNPKIPYVESFPT----------------------------GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175 (338)
T ss_dssp EGGGGCSCCSSSBCTTSCC----------------------------CCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred cHHHhCCCCCCCcCcccCC----------------------------CCCCChHHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 999997643 33443110 0112789999999999998762 37999999
Q ss_pred cCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhc--Cceeeecc------CCCccccccchh
Q psy16243 408 RPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGL--GLLRSMHA------DPELVADMVPAD 479 (782)
Q Consensus 408 Rp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~--g~~~~~~~------~~~~~~d~VpVD 479 (782)
||+++|||...+..| +.. .... ......+..... +....+.+ +++..+++|||+
T Consensus 176 R~~~v~G~~~~~~~g-------~~~---------~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 237 (338)
T 1udb_A 176 RYFNPVGAHPSGDMG-------EDP---------QGIP--NNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_dssp EECEEECCCTTSSSC-------CCC---------CSSC--CSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred eeceecCCCcccccc-------ccc---------ccch--hhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHH
Confidence 999999985432221 100 0000 011112222222 22222322 567889999999
Q ss_pred HHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 480 NVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 480 dva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
|+|++++.++..... ...+++||++++ .++|+.|+++.+.+..+.
T Consensus 238 Dva~a~~~~l~~~~~----------------------~~~~~~yni~~~--~~~s~~e~~~~i~~~~g~ 282 (338)
T 1udb_A 238 DLADGHVVAMEKLAN----------------------KPGVHIYNLGAG--VGNSVLDVVNAFSKACGK 282 (338)
T ss_dssp HHHHHHHHHHHHHTT----------------------CCEEEEEEESCS--CCEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhhhhc----------------------cCCCcEEEecCC--CceeHHHHHHHHHHHhCC
Confidence 999999988864210 122479999998 889999999999998774
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=9.4e-21 Score=205.39 Aligned_cols=240 Identities=15% Similarity=0.133 Sum_probs=174.2
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+++|+|||.+|+.|..+ .+.|.. .+.+|+++.|...... +. ..
T Consensus 17 ~~~~~~vlVTGasG~iG~~l----~~~L~~---------------~g~~V~~~~r~~~~~~------~~-----~~---- 62 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNL----IEHWLP---------------QGHEILVIDNFATGKR------EV-----LP---- 62 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHH----HHHHGG---------------GTCEEEEEECCSSSCG------GG-----SC----
T ss_pred cCCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEECCCccch------hh-----hh----
Confidence 45578999999444333332 223321 2578999998543211 00 00
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch--hhHHHHHHhhHHHHHHHHHHHHHccCCc
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD--AHLKVAVSINLRATKALLEMAKEMKQLK 326 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~Lle~a~~~~~~~ 326 (782)
...++.++.+|++++ +++.++++ ++|+|||+||..... .... +++|+.|+.+++++|.+. +++
T Consensus 63 ----~l~~v~~~~~Dl~d~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~ 129 (330)
T 2pzm_A 63 ----PVAGLSVIEGSVTDA------GLLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-GVK 129 (330)
T ss_dssp ----SCTTEEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-TCS
T ss_pred ----ccCCceEEEeeCCCH------HHHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-CCC
Confidence 014788999999987 78889998 899999999986542 2333 899999999999999986 789
Q ss_pred eEEEEecceeccCCC----cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCC
Q psy16243 327 SFVHVSTAYSNCRQP----IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGM 402 (782)
Q Consensus 327 ~fV~vST~~v~~~~~----~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~gl 402 (782)
+|||+||.++|+... ++.|+. ...+.|+.||+.+|+++..+ ++
T Consensus 130 ~iV~~SS~~~~~~~~~~~~~~~E~~-------------------------------~~~~~Y~~sK~~~e~~~~~~--~~ 176 (330)
T 2pzm_A 130 RLLNFQTALCYGRPATVPIPIDSPT-------------------------------APFTSYGISKTAGEAFLMMS--DV 176 (330)
T ss_dssp EEEEEEEGGGGCSCSSSSBCTTCCC-------------------------------CCCSHHHHHHHHHHHHHHTC--SS
T ss_pred EEEEecCHHHhCCCccCCCCcCCCC-------------------------------CCCChHHHHHHHHHHHHHHc--CC
Confidence 999999999987642 333331 11278999999999999887 89
Q ss_pred cEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHH
Q psy16243 403 PVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVI 482 (782)
Q Consensus 403 p~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva 482 (782)
+.+++||+++|||... . ++ ...++..+..|. ...+++. ..++++++|+|
T Consensus 177 ~~~~iR~~~v~gp~~~--~--------------------~~------~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva 225 (330)
T 2pzm_A 177 PVVSLRLANVTGPRLA--I--------------------GP------IPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFL 225 (330)
T ss_dssp CEEEEEECEEECTTCC--S--------------------SH------HHHHHHHHHTTC--CCCEESC-EECEEEHHHHH
T ss_pred CEEEEeeeeeECcCCC--C--------------------CH------HHHHHHHHHcCC--EEeCCCC-EecceeHHHHH
Confidence 9999999999997531 1 11 112334444454 3455666 88999999999
Q ss_pred H-HHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 483 N-CIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 483 ~-aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+ +++.++... . +++||++++ .++++.|+++.+.+.++..
T Consensus 226 ~~a~~~~~~~~-------------------------~-g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 226 AIADLSLQEGR-------------------------P-TGVFNVSTG--EGHSIKEVFDVVLDYVGAT 265 (330)
T ss_dssp HHHHHHTSTTC-------------------------C-CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhhcC-------------------------C-CCEEEeCCC--CCCCHHHHHHHHHHHhCCC
Confidence 9 998887542 2 789999998 8899999999999988754
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.85 E-value=6.9e-21 Score=206.68 Aligned_cols=274 Identities=17% Similarity=0.110 Sum_probs=178.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.++.|+|||.+|+.|..+ .+.|.. .+.+|+++.|.... .+.+.+.... .
T Consensus 9 ~~~~~vlVTGatG~iG~~l----~~~L~~---------------~g~~V~~~~r~~~~---~~~~~~~~~~--------~ 58 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHV----VEQLLE---------------HGYKVRGTARSASK---LANLQKRWDA--------K 58 (342)
T ss_dssp CTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESSHHH---HHHHHHHHHH--------H
T ss_pred CCCCEEEEECCccHHHHHH----HHHHHH---------------CCCEEEEEeCCccc---HHHHHHHhhc--------c
Confidence 4578999999444433332 122321 25789999986432 1222221110 0
Q ss_pred CcccccceeEE-ecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 252 CPHYLSKMVAV-TGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 252 ~~~~~~kv~~i-~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
...+++++ .+|++++ +++.++++++|+|||+||.........+.+++|+.||.+++++|.+..++++|||
T Consensus 59 ---~~~~~~~~~~~D~~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~ 129 (342)
T 1y1p_A 59 ---YPGRFETAVVEDMLKQ------GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVL 129 (342)
T ss_dssp ---STTTEEEEECSCTTST------TTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEE
T ss_pred ---CCCceEEEEecCCcCh------HHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 01368888 8999987 6677788899999999998776667778999999999999999985447899999
Q ss_pred EecceeccCC------CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC----C
Q psy16243 331 VSTAYSNCRQ------PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG----A 400 (782)
Q Consensus 331 vST~~v~~~~------~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~----~ 400 (782)
+||.++++.. .++.|+.... .... + ..+. .+..+....+.|+.||..+|+++..+. .
T Consensus 130 ~SS~~~~~~~~~~~~~~~~~E~~~~~----~~~~---~-----~~~~-~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~ 196 (342)
T 1y1p_A 130 TSSTVSALIPKPNVEGIYLDEKSWNL----ESID---K-----AKTL-PESDPQKSLWVYAASKTEAELAAWKFMDENKP 196 (342)
T ss_dssp ECCGGGTCCCCTTCCCCEECTTCCCH----HHHH---H-----HHHS-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eccHHHhcCCCCCCCCcccCccccCc----hhhh---h-----hccc-cccccccchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999988542 2445542110 0000 0 0000 000000112789999999999998762 3
Q ss_pred CCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhH
Q psy16243 401 GMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADN 480 (782)
Q Consensus 401 glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDd 480 (782)
+++++++||+.+|||...+... + .....++..+..|....+.+++ ...++++|+|
T Consensus 197 ~~~~~~~rp~~v~g~~~~~~~~-------------------~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~D 251 (342)
T 1y1p_A 197 HFTLNAVLPNYTIGTIFDPETQ-------------------S-----GSTSGWMMSLFNGEVSPALALM-PPQYYVSAVD 251 (342)
T ss_dssp SSEEEEEEESEEECCCSCTTTC-------------------C-----CHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHH
T ss_pred CceEEEEcCCceECCCCCCCCC-------------------C-----ccHHHHHHHHHcCCCccccccC-CcCCEeEHHH
Confidence 7899999999999986543210 0 0112345555566544444444 6789999999
Q ss_pred HHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 481 VINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 481 va~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+|++++.++... ...+..+ ++++ .++|+.|+++.+.+.++..
T Consensus 252 va~a~~~~~~~~------------------------~~~g~~~-~~~g--~~~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 252 IGLLHLGCLVLP------------------------QIERRRV-YGTA--GTFDWNTVLATFRKLYPSK 293 (342)
T ss_dssp HHHHHHHHHHCT------------------------TCCSCEE-EECC--EEECHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHcCc------------------------ccCCceE-EEeC--CCCCHHHHHHHHHHHCCCc
Confidence 999999888542 1123333 4455 6799999999999988754
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.1e-21 Score=202.94 Aligned_cols=188 Identities=17% Similarity=0.126 Sum_probs=146.9
Q ss_pred cCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceecc
Q psy16243 264 GDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNC 338 (782)
Q Consensus 264 gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~ 338 (782)
+|++++ +.+.++++ ++|+|||+||..... ......+++|+.|+.+++++|++. +. +|||+||.++|+
T Consensus 40 ~D~~d~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~ 111 (287)
T 3sc6_A 40 LDITNI------SQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQ 111 (287)
T ss_dssp SCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSC
T ss_pred cCCCCH------HHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcC
Confidence 677766 77888887 699999999987654 356788999999999999999987 55 699999999997
Q ss_pred CCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEecc
Q psy16243 339 RQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 339 ~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~ 416 (782)
... ++.|+... ...+.|+.||..+|+++..+.. +++++||+.+|||.
T Consensus 112 ~~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~E~~~~~~~~--~~~ilR~~~v~G~~ 160 (287)
T 3sc6_A 112 GDRPEGYDEFHNP-----------------------------APINIYGASKYAGEQFVKELHN--KYFIVRTSWLYGKY 160 (287)
T ss_dssp CCCSSCBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHCS--SEEEEEECSEECSS
T ss_pred CCCCCCCCCCCCC-----------------------------CCCCHHHHHHHHHHHHHHHhCC--CcEEEeeeeecCCC
Confidence 643 45554211 1127899999999999998854 78999999999975
Q ss_pred CCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccc
Q psy16243 417 KEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTW 496 (782)
Q Consensus 417 ~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 496 (782)
... + ...++..+..|....+.+ +...+++|++|+|++++.++...
T Consensus 161 ~~~-----------------------~------~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~---- 205 (287)
T 3sc6_A 161 GNN-----------------------F------VKTMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTS---- 205 (287)
T ss_dssp SCC-----------------------H------HHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSC----
T ss_pred CCc-----------------------H------HHHHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCC----
Confidence 321 1 113444555565555554 47899999999999999988642
Q ss_pred hhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 497 NEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
. +++||++++ .++|+.|+++.+.+.++..
T Consensus 206 ---------------------~-~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 234 (287)
T 3sc6_A 206 ---------------------L-YGTYHVSNT--GSCSWFEFAKKIFSYANMK 234 (287)
T ss_dssp ---------------------C-CEEEECCCB--SCEEHHHHHHHHHHHHTCC
T ss_pred ---------------------C-CCeEEEcCC--CcccHHHHHHHHHHHcCCC
Confidence 2 679999999 8899999999999988754
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.5e-21 Score=206.63 Aligned_cols=214 Identities=12% Similarity=0.065 Sum_probs=152.5
Q ss_pred cCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCc----hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceec
Q psy16243 264 GDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRF----DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSN 337 (782)
Q Consensus 264 gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~ 337 (782)
+|++++ +++.++++ ++|+|||+||.... ..+..+.+++|+.||.+++++|++. ++++|||+||.++|
T Consensus 39 ~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~vy 111 (321)
T 1e6u_A 39 LNLLDS------RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIY 111 (321)
T ss_dssp CCTTCH------HHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGS
T ss_pred CCccCH------HHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHHHc
Confidence 577765 78888888 89999999998752 2455678899999999999999987 78999999999999
Q ss_pred cCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEecCCeEE
Q psy16243 338 CRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRPSIVI 413 (782)
Q Consensus 338 ~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvRp~~v~ 413 (782)
+... ++.|+.... .+. .+..+.|+.||..+|+++..+. .+++++|+||+.+|
T Consensus 112 g~~~~~~~~E~~~~~----------------------~~~--~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~ 167 (321)
T 1e6u_A 112 PKLAKQPMAESELLQ----------------------GTL--EPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLY 167 (321)
T ss_dssp CTTCCSSBCGGGTTS----------------------SCC--CGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred CCCCCCCcCcccccc----------------------CCC--CCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcC
Confidence 8632 444542100 000 0001589999999999998863 48999999999999
Q ss_pred eccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhh----cC-ceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 414 ATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAG----LG-LLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 414 G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~----~g-~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
||...+.. .. + .....++..+. .| ....++++++..+++|||+|+|++++.+
T Consensus 168 G~~~~~~~--------------------~~--~-~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~ 224 (321)
T 1e6u_A 168 GPHDNFHP--------------------SN--S-HVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV 224 (321)
T ss_dssp STTCCCCT--------------------TC--S-SHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred CcCCCCCC--------------------CC--C-ccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHH
Confidence 98654321 00 0 00112333333 23 3445678889999999999999999998
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+......... . ....+++||++++ .++|+.|+++.+.+.++..
T Consensus 225 ~~~~~~~~~~---------------~-~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 267 (321)
T 1e6u_A 225 MELAHEVWLE---------------N-TQPMLSHINVGTG--VDCTIRELAQTIAKVVGYK 267 (321)
T ss_dssp HHSCHHHHHH---------------T-SBTTBCCEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred HhCccccccc---------------c-cccCCceEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 8653110000 0 0013589999998 8899999999999988753
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.6e-21 Score=207.09 Aligned_cols=254 Identities=14% Similarity=0.032 Sum_probs=178.6
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+++|+|||.+|+.|..+ .+.|.. .+.+|+++.|....... +++++..
T Consensus 3 ~~~vlVtGatG~iG~~l----~~~L~~---------------~G~~V~~~~r~~~~~~~-~~~~~~~------------- 49 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYL----AKLLLE---------------KGYEVYGADRRSGEFAS-WRLKELG------------- 49 (345)
T ss_dssp CCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEECSCCSTTTT-HHHHHTT-------------
T ss_pred CCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEECCCccccc-ccHhhcc-------------
Confidence 57899999444333332 223321 25789999987543211 2222211
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCC-ce
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQL-KS 327 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~-~~ 327 (782)
...++.++.+|++++ +++.+++++ +|+|||+||..... +.....+++|+.||.+++++|.++ ++ ++
T Consensus 50 -~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~ 121 (345)
T 2z1m_A 50 -IENDVKIIHMDLLEF------SNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTK 121 (345)
T ss_dssp -CTTTEEECCCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCE
T ss_pred -ccCceeEEECCCCCH------HHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCce
Confidence 013688999999987 788888886 59999999986542 346678999999999999999987 65 89
Q ss_pred EEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCc
Q psy16243 328 FVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMP 403 (782)
Q Consensus 328 fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp 403 (782)
|||+||.++||... ++.|+... ...+.|+.||+.+|.++..+. .+++
T Consensus 122 iv~~SS~~vyg~~~~~~~~e~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~ 172 (345)
T 2z1m_A 122 FYQASTSEMFGKVQEIPQTEKTPF-----------------------------YPRSPYAVAKLFGHWITVNYREAYNMF 172 (345)
T ss_dssp EEEEEEGGGGCSCSSSSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred EEEEechhhcCCCCCCCCCccCCC-----------------------------CCCChhHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999998643 33443111 112789999999999998873 3799
Q ss_pred EEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCce-eeeccCCCccccccchhHHH
Q psy16243 404 VAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLL-RSMHADPELVADMVPADNVI 482 (782)
Q Consensus 404 ~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~VpVDdva 482 (782)
+++.|+++++||.... .+.. .....++..+..|.. ....++++..+++++++|+|
T Consensus 173 ~~~~r~~~~~gpg~~~----------------------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva 228 (345)
T 2z1m_A 173 ACSGILFNHESPLRGI----------------------EFVT--RKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYV 228 (345)
T ss_dssp EEEEEECCEECTTSCT----------------------TSHH--HHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHH
T ss_pred eEeeeeeeecCCCCCC----------------------cchh--HHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHH
Confidence 9999999999974221 0000 001122333345543 33567788899999999999
Q ss_pred HHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 483 NCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 483 ~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
++++.++... ..++||++++ .++++.|+++.+.+.++..
T Consensus 229 ~a~~~~~~~~--------------------------~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 267 (345)
T 2z1m_A 229 EAMWLMMQQP--------------------------EPDDYVIATG--ETHTVREFVEKAAKIAGFD 267 (345)
T ss_dssp HHHHHHHTSS--------------------------SCCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCC--------------------------CCceEEEeCC--CCccHHHHHHHHHHHhCCC
Confidence 9999888542 2378999998 8899999999999988754
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.6e-21 Score=210.11 Aligned_cols=204 Identities=18% Similarity=0.153 Sum_probs=158.1
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHc-cCCc----
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEM-KQLK---- 326 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~-~~~~---- 326 (782)
.++.++.+|++++ +++.++++ ++|+|||+||..... ...+..+++|+.||.+++++|.+. .+++
T Consensus 50 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~ 123 (361)
T 1kew_A 50 NRYNFEHADICDS------AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKK 123 (361)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHH
T ss_pred CCeEEEECCCCCH------HHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccc
Confidence 4788999999987 88888887 899999999986533 345578899999999999999875 2566
Q ss_pred ---eEEEEecceeccCCC------------cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 327 ---SFVHVSTAYSNCRQP------------IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 327 ---~fV~vST~~v~~~~~------------~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
+|||+||.++|+... ++.|+. |. ...+.|+.||..+
T Consensus 124 ~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~--------------------------~~---~~~~~Y~~sK~~~ 174 (361)
T 1kew_A 124 NNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT--------------------------AY---APSSPYSASKASS 174 (361)
T ss_dssp HHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS--------------------------CC---CCCSHHHHHHHHH
T ss_pred cCceEEEeCCHHHhCCCcccccccccccCCCCCCCC--------------------------CC---CCCCccHHHHHHH
Confidence 999999999998643 222221 11 1237899999999
Q ss_pred HHHHHHcC--CCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCC
Q psy16243 392 EDMVRRGG--AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADP 469 (782)
Q Consensus 392 E~ll~~~~--~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 469 (782)
|.++..+. .+++++++||+.||||...+. ++ ...++..+..|....+.+++
T Consensus 175 e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~---------------------~~------~~~~~~~~~~~~~~~~~~~~ 227 (361)
T 1kew_A 175 DHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE---------------------KL------IPLVILNALEGKPLPIYGKG 227 (361)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEESTTCCTT---------------------SH------HHHHHHHHHHTCCEEEETTS
T ss_pred HHHHHHHHHHhCCcEEEEeeceeECCCCCcc---------------------cH------HHHHHHHHHcCCCceEcCCC
Confidence 99998873 389999999999999754321 00 11344555566555566888
Q ss_pred CccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 470 ELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 470 ~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+...++++++|+|++++.++... ..+++||++++ .++++.|+++.+.+.++..
T Consensus 228 ~~~~~~i~v~Dva~a~~~~~~~~-------------------------~~g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 280 (361)
T 1kew_A 228 DQIRDWLYVEDHARALHMVVTEG-------------------------KAGETYNIGGH--NEKKNLDVVFTICDLLDEI 280 (361)
T ss_dssp CCEEEEEEHHHHHHHHHHHHHHC-------------------------CTTCEEEECCC--CEEEHHHHHHHHHHHHHHH
T ss_pred ceeEeeEEHHHHHHHHHHHHhCC-------------------------CCCCEEEecCC--CeeeHHHHHHHHHHHhCCc
Confidence 89999999999999999888542 24689999998 8899999999999987753
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=8.9e-21 Score=209.20 Aligned_cols=205 Identities=14% Similarity=0.044 Sum_probs=156.4
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCC---ceE
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQL---KSF 328 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~---~~f 328 (782)
.++.++.+|++++ +++.+++++ +|+|||+||..... ......+++|+.||.+++++|.+. ++ ++|
T Consensus 79 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~i 151 (375)
T 1t2a_A 79 GNMKLHYGDLTDS------TCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKF 151 (375)
T ss_dssp -CEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEE
T ss_pred CCceEEEccCCCH------HHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceE
Confidence 4788999999987 788888876 59999999987653 345678899999999999999986 56 799
Q ss_pred EEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcE
Q psy16243 329 VHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPV 404 (782)
Q Consensus 329 V~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~ 404 (782)
||+||.++|+... ++.|+... ...+.|+.||+.+|.++..+. .++++
T Consensus 152 v~~SS~~~~~~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~ 202 (375)
T 1t2a_A 152 YQASTSELYGKVQEIPQKETTPF-----------------------------YPRSPYGAAKLYAYWIVVNFREAYNLFA 202 (375)
T ss_dssp EEEEEGGGTCSCSSSSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred EEecchhhhCCCCCCCCCccCCC-----------------------------CCCChhHHHHHHHHHHHHHHHHHhCCCE
Confidence 9999999998643 44444211 112789999999999998873 38999
Q ss_pred EEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCce-eeeccCCCccccccchhHHHH
Q psy16243 405 AMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLL-RSMHADPELVADMVPADNVIN 483 (782)
Q Consensus 405 ~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~VpVDdva~ 483 (782)
+++||+.+|||...+ ++... ....++..+..|.. ....++++..++++||+|+|+
T Consensus 203 ~i~r~~~~~gp~~~~----------------------~~~~~--~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~ 258 (375)
T 1t2a_A 203 VNGILFNHESPRRGA----------------------NFVTR--KISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE 258 (375)
T ss_dssp EEEEECCEECTTSCT----------------------TSHHH--HHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred EEEecccccCCCCCC----------------------CcchH--HHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHH
Confidence 999999999975432 11110 01123344455543 245678899999999999999
Q ss_pred HHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 484 CIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 484 aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+++.++... ..++||++++ .++|+.|+++.+.+.++..
T Consensus 259 a~~~~~~~~--------------------------~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 296 (375)
T 1t2a_A 259 AMWLMLQND--------------------------EPEDFVIATG--EVHSVREFVEKSFLHIGKT 296 (375)
T ss_dssp HHHHHHHSS--------------------------SCCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred HHHHHHhcC--------------------------CCceEEEeCC--CcccHHHHHHHHHHHhCCC
Confidence 999888542 1378999998 8899999999999988753
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-20 Score=206.77 Aligned_cols=204 Identities=14% Similarity=0.061 Sum_probs=156.1
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCC---ceE
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQL---KSF 328 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~---~~f 328 (782)
.++.++.+|++++ +++.+++++ +|+|||+||..... +.....+++|+.||.+++++|++. ++ ++|
T Consensus 55 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~i 127 (372)
T 1db3_A 55 PKFHLHYGDLSDT------SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRF 127 (372)
T ss_dssp CCEEECCCCSSCH------HHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEE
T ss_pred CceEEEECCCCCH------HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEE
Confidence 4788999999987 788888876 69999999976533 345678899999999999999987 56 799
Q ss_pred EEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcE
Q psy16243 329 VHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPV 404 (782)
Q Consensus 329 V~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~ 404 (782)
||+||.++|+... ++.|+... ...+.|+.||..+|.++..+. .++++
T Consensus 128 v~~SS~~v~g~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~ 178 (372)
T 1db3_A 128 YQASTSELYGLVQEIPQKETTPF-----------------------------YPRSPYAVAKLYAYWITVNYRESYGMYA 178 (372)
T ss_dssp EEEEEGGGGTTCCSSSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred EEeCChhhhCCCCCCCCCccCCC-----------------------------CCCChHHHHHHHHHHHHHHHHHHhCCCe
Confidence 9999999998643 34444211 112789999999999998873 38999
Q ss_pred EEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCce-eeeccCCCccccccchhHHHH
Q psy16243 405 AMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLL-RSMHADPELVADMVPADNVIN 483 (782)
Q Consensus 405 ~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~VpVDdva~ 483 (782)
+++|++.+|||...+ .+... ....++..+..|.. ....++++..++++||+|+|+
T Consensus 179 ~~~r~~~~~gp~~~~----------------------~~~~~--~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~ 234 (372)
T 1db3_A 179 CNGILFNHESPRRGE----------------------TFVTR--KITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVK 234 (372)
T ss_dssp EEEEECCEECTTSCT----------------------TSHHH--HHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHH
T ss_pred EEEEECCccCCCCCC----------------------cchhh--HHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHH
Confidence 999999999975432 11100 01123444455653 345678899999999999999
Q ss_pred HHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 484 CIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 484 aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
+++.++... .+++||++++ +++|+.|+++.+.+.++.
T Consensus 235 a~~~~~~~~--------------------------~~~~~ni~~~--~~~s~~e~~~~i~~~~g~ 271 (372)
T 1db3_A 235 MQWMMLQQE--------------------------QPEDFVIATG--VQYSVRQFVEMAAAQLGI 271 (372)
T ss_dssp HHHHTTSSS--------------------------SCCCEEECCC--CCEEHHHHHHHHHHTTTE
T ss_pred HHHHHHhcC--------------------------CCceEEEcCC--CceeHHHHHHHHHHHhCC
Confidence 999887542 2478999998 889999999999998875
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.7e-20 Score=197.87 Aligned_cols=187 Identities=16% Similarity=0.125 Sum_probs=143.5
Q ss_pred cCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceecc
Q psy16243 264 GDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNC 338 (782)
Q Consensus 264 gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~ 338 (782)
+|++++ +++.++++ ++|+|||+||..... ....+.+++|+.|+.+++++|++. ++ +|||+||.++|+
T Consensus 47 ~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v~~ 118 (292)
T 1vl0_A 47 LDITNV------LAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYVFD 118 (292)
T ss_dssp CCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSC
T ss_pred CCCCCH------HHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHeEC
Confidence 677765 77888887 799999999987643 456678999999999999999987 56 999999999998
Q ss_pred CCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEecc
Q psy16243 339 RQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 339 ~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~ 416 (782)
... ++.|+... ...+.|+.||..+|.++..+. .+++++||+.+|||
T Consensus 119 ~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~E~~~~~~~--~~~~~lR~~~v~G~- 166 (292)
T 1vl0_A 119 GEAKEPITEFDEV-----------------------------NPQSAYGKTKLEGENFVKALN--PKYYIVRTAWLYGD- 166 (292)
T ss_dssp SCCSSCBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHC--SSEEEEEECSEESS-
T ss_pred CCCCCCCCCCCCC-----------------------------CCccHHHHHHHHHHHHHHhhC--CCeEEEeeeeeeCC-
Confidence 643 44454211 112789999999999999874 36899999999997
Q ss_pred CCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccc
Q psy16243 417 KEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTW 496 (782)
Q Consensus 417 ~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 496 (782)
.. ++. ..++..+..|......+ +...++++++|+|++++.++...
T Consensus 167 ~~-----------------------~~~------~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~---- 211 (292)
T 1vl0_A 167 GN-----------------------NFV------KTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK---- 211 (292)
T ss_dssp SS-----------------------CHH------HHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT----
T ss_pred Cc-----------------------ChH------HHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC----
Confidence 22 111 12333444454444444 47889999999999999888642
Q ss_pred hhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 497 NEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
.+++||++++ .++|+.|+++.+.+.++..
T Consensus 212 ----------------------~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 240 (292)
T 1vl0_A 212 ----------------------NYGTFHCTCK--GICSWYDFAVEIFRLTGID 240 (292)
T ss_dssp ----------------------CCEEEECCCB--SCEEHHHHHHHHHHHHCCC
T ss_pred ----------------------CCcEEEecCC--CCccHHHHHHHHHHHhCCC
Confidence 3689999998 8899999999999988754
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=200.52 Aligned_cols=199 Identities=16% Similarity=0.087 Sum_probs=127.3
Q ss_pred EEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecce
Q psy16243 261 AVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAY 335 (782)
Q Consensus 261 ~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~ 335 (782)
++.+|++++ +++.+++++ +|+|||+||..... ......+++|+.||.+++++|.+. +. +|||+||.+
T Consensus 41 ~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~ 112 (315)
T 2ydy_A 41 FEQVNLLDS------NAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDY 112 (315)
T ss_dssp -----------------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGG
T ss_pred eEEecCCCH------HHHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHH
Confidence 567899887 667777764 89999999976542 345678899999999999999987 55 999999999
Q ss_pred eccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEe
Q psy16243 336 SNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIA 414 (782)
Q Consensus 336 v~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G 414 (782)
+|+... ++.|+... ...+.|+.||..+|+++..+ +++++++||+.|||
T Consensus 113 v~~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~--~~~~~~lR~~~v~G 161 (315)
T 2ydy_A 113 VFDGTNPPYREEDIP-----------------------------APLNLYGKTKLDGEKAVLEN--NLGAAVLRIPILYG 161 (315)
T ss_dssp GSCSSSCSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHH--CTTCEEEEECSEEC
T ss_pred HcCCCCCCCCCCCCC-----------------------------CCcCHHHHHHHHHHHHHHHh--CCCeEEEeeeeeeC
Confidence 987632 44444211 11278999999999999987 46779999999999
Q ss_pred ccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhh-cCceeeeccCCCccccccchhHHHHHHHHhhhhcc
Q psy16243 415 TNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAG-LGLLRSMHADPELVADMVPADNVINCIISAAWNVH 493 (782)
Q Consensus 415 ~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 493 (782)
+...+.. ++. ..++..+. .|...... ++...++++++|+|++++.++....
T Consensus 162 ~~~~~~~--------------------~~~------~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~ 213 (315)
T 2ydy_A 162 EVEKLEE--------------------SAV------TVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRM 213 (315)
T ss_dssp SCSSGGG--------------------STT------GGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHH
T ss_pred CCCcccc--------------------cHH------HHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhc
Confidence 7654211 111 12333333 45433333 4678899999999999998876421
Q ss_pred ccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 494 QTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
.. ...+++||++++ .++++.|+++.+.+.++..
T Consensus 214 ~~---------------------~~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 246 (315)
T 2ydy_A 214 LD---------------------PSIKGTFHWSGN--EQMTKYEMACAIADAFNLP 246 (315)
T ss_dssp TC---------------------TTCCEEEECCCS--CCBCHHHHHHHHHHHTTCC
T ss_pred cc---------------------cCCCCeEEEcCC--CcccHHHHHHHHHHHhCCC
Confidence 00 134689999998 8999999999999988764
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=200.94 Aligned_cols=194 Identities=20% Similarity=0.186 Sum_probs=147.8
Q ss_pred EecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEeccee
Q psy16243 262 VTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYS 336 (782)
Q Consensus 262 i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v 336 (782)
+.+|++++ +++.+++++ +|+|||+||..... ....+.+++|+.||.+++++|++. ++ +|||+||.++
T Consensus 36 ~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v 107 (299)
T 1n2s_A 36 FCGDFSNP------KGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYV 107 (299)
T ss_dssp SCCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGG
T ss_pred ccccCCCH------HHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccE
Confidence 46888876 788888886 99999999986642 456678999999999999999987 55 7999999999
Q ss_pred ccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEe
Q psy16243 337 NCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIA 414 (782)
Q Consensus 337 ~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G 414 (782)
|+... ++.|+.. . ...+.|+.||..+|+++..+.. +++++||+.+||
T Consensus 108 y~~~~~~~~~E~~~--------------------------~---~p~~~Y~~sK~~~E~~~~~~~~--~~~ilRp~~v~G 156 (299)
T 1n2s_A 108 FPGTGDIPWQETDA--------------------------T---SPLNVYGKTKLAGEKALQDNCP--KHLIFRTSWVYA 156 (299)
T ss_dssp SCCCTTCCBCTTSC--------------------------C---CCSSHHHHHHHHHHHHHHHHCS--SEEEEEECSEEC
T ss_pred EeCCCCCCCCCCCC--------------------------C---CCccHHHHHHHHHHHHHHHhCC--CeEEEeeeeecC
Confidence 98643 3444421 1 1127899999999999998753 899999999999
Q ss_pred ccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccc
Q psy16243 415 TNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQ 494 (782)
Q Consensus 415 ~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 494 (782)
|... ++ ...++..+..|......+ +...+++|++|+|++++.++.....
T Consensus 157 ~~~~-----------------------~~------~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~ 205 (299)
T 1n2s_A 157 GKGN-----------------------NF------AKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALN 205 (299)
T ss_dssp SSSC-----------------------CH------HHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHH
T ss_pred CCcC-----------------------cH------HHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhcc
Confidence 7432 11 113444445565444444 4789999999999999998865310
Q ss_pred cchhhhhcccccccccCCCCCCCC-cceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 495 TWNEKKAAGKLVADSLDKNYPDDT-DIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
.. .+++||++++ +++|+.|+++.+.+.++..
T Consensus 206 ----------------------~~~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 237 (299)
T 1n2s_A 206 ----------------------KPEVAGLYHLVAG--GTTTWHDYAALVFDEARKA 237 (299)
T ss_dssp ----------------------CGGGCEEEECCCB--SCEEHHHHHHHHHHHHHHH
T ss_pred ----------------------ccccCceEEEeCC--CCCCHHHHHHHHHHHhCCC
Confidence 01 3689999998 8999999999999988754
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.4e-20 Score=200.36 Aligned_cols=238 Identities=20% Similarity=0.182 Sum_probs=170.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.++.|+|||.+|+.|..+ .+.|.. .+.+|+++.|...... + .+ .
T Consensus 19 ~~~~~vlVTGatG~iG~~l----~~~L~~---------------~g~~V~~~~r~~~~~~--~----~l--------~-- 63 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHI----AELLLE---------------RGDKVVGIDNFATGRR--E----HL--------K-- 63 (333)
T ss_dssp --CCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEECCSSCCG--G----GS--------C--
T ss_pred CCCCEEEEeCCccHHHHHH----HHHHHH---------------CCCEEEEEECCCccch--h----hH--------h--
Confidence 4468899999444333332 223321 2578999988643210 0 00 0
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch--hhHHHHHHhhHHHHHHHHHHHHHccCCce
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD--AHLKVAVSINLRATKALLEMAKEMKQLKS 327 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~ 327 (782)
. ..++.++.+|++++ +++.+++++ +|+|||+||..... .... +++|+.||.+++++|.+. ++++
T Consensus 64 --~-~~~~~~~~~Dl~d~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~ 131 (333)
T 2q1w_A 64 --D-HPNLTFVEGSIADH------ALVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKN-NVGR 131 (333)
T ss_dssp --C-CTTEEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHT-TCSE
T ss_pred --h-cCCceEEEEeCCCH------HHHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHh-CCCE
Confidence 0 14788999999987 788888887 99999999986542 2222 899999999999999986 7899
Q ss_pred EEEEecceecc----CCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCC-ccHHHHHHHHHHHHHH-cCC
Q psy16243 328 FVHVSTAYSNC----RQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWP-NTYALTKQVAEDMVRR-GGA 400 (782)
Q Consensus 328 fV~vST~~v~~----~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~p-n~Y~~SK~~aE~ll~~-~~~ 400 (782)
|||+||.++|+ ... ++.|+. ... +.|+.||+.+|+++.. +.
T Consensus 132 iV~~SS~~~~g~~~~~~~~~~~E~~-------------------------------~p~~~~Y~~sK~~~E~~~~~s~~- 179 (333)
T 2q1w_A 132 FVYFQTALCYGVKPIQQPVRLDHPR-------------------------------NPANSSYAISKSANEDYLEYSGL- 179 (333)
T ss_dssp EEEEEEGGGGCSCCCSSSBCTTSCC-------------------------------CCTTCHHHHHHHHHHHHHHHHTC-
T ss_pred EEEECcHHHhCCCcccCCCCcCCCC-------------------------------CCCCCchHHHHHHHHHHHHhhhC-
Confidence 99999999987 322 223321 112 6899999999999988 65
Q ss_pred CCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhH
Q psy16243 401 GMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADN 480 (782)
Q Consensus 401 glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDd 480 (782)
+++++||+.+|||... . ++. ..++..+..|. .+.+ ++...++++++|
T Consensus 180 --~~~ilR~~~v~gp~~~--~--------------------~~~------~~~~~~~~~~~--~~~~-~~~~~~~i~v~D 226 (333)
T 2q1w_A 180 --DFVTFRLANVVGPRNV--S--------------------GPL------PIFFQRLSEGK--KCFV-TKARRDFVFVKD 226 (333)
T ss_dssp --CEEEEEESEEESTTCC--S--------------------SHH------HHHHHHHHTTC--CCEE-EECEECEEEHHH
T ss_pred --CeEEEeeceEECcCCc--C--------------------cHH------HHHHHHHHcCC--eeeC-CCceEeeEEHHH
Confidence 8899999999997521 1 111 12344444554 3444 667899999999
Q ss_pred HHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 481 VINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 481 va~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+|++++.++... . +++||++++ .++++.|+++.+.+.++..
T Consensus 227 va~ai~~~~~~~-------------------------~-g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 227 LARATVRAVDGV-------------------------G-HGAYHFSSG--TDVAIKELYDAVVEAMALP 267 (333)
T ss_dssp HHHHHHHHHTTC-------------------------C-CEEEECSCS--CCEEHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhcC-------------------------C-CCEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 999999888542 2 789999998 8899999999999988764
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-19 Score=195.63 Aligned_cols=208 Identities=18% Similarity=0.127 Sum_probs=152.2
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCc--hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRF--DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f--~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
++.++.+|++++ +++.++++ ++|+|||+||.... .......+++|+.||.+++++|++. ++++|||+||
T Consensus 40 ~~~~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS 112 (317)
T 3ajr_A 40 GIKFITLDVSNR------DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPST 112 (317)
T ss_dssp TCCEEECCTTCH------HHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEE
T ss_pred CceEEEecCCCH------HHHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecC
Confidence 456789999987 78888887 89999999997542 2345678899999999999999987 7899999999
Q ss_pred ceeccCCC---cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEec
Q psy16243 334 AYSNCRQP---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVR 408 (782)
Q Consensus 334 ~~v~~~~~---~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvR 408 (782)
.++|+... +++|+. +. ...+.|+.||..+|.++..+ ..+++++++|
T Consensus 113 ~~~~~~~~~~~~~~e~~--------------------------~~---~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR 163 (317)
T 3ajr_A 113 IGVFGPETPKNKVPSIT--------------------------IT---RPRTMFGVTKIAAELLGQYYYEKFGLDVRSLR 163 (317)
T ss_dssp GGGCCTTSCSSSBCSSS--------------------------CC---CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHHhCCCCCCCCccccc--------------------------cC---CCCchHHHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 99998632 233331 11 12279999999999999876 3489999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
|+.+||+...|.. ++.+ .....+.....+......++++..++++||+|+|++++.+
T Consensus 164 ~~~~~g~~~~~~~--------------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 220 (317)
T 3ajr_A 164 YPGIISYKAEPTA--------------------GTTD---YAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDL 220 (317)
T ss_dssp ECEEECSSSCCCS--------------------CSST---HHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHH
T ss_pred cCcEeccCCCCCC--------------------cchh---HHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHH
Confidence 9999997654321 1100 0112223333333334566778899999999999999988
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
+...... ...+++||+++ .++|+.|+++.+.+.++.
T Consensus 221 l~~~~~~---------------------~~~g~~~~i~~---~~~s~~e~~~~i~~~~~~ 256 (317)
T 3ajr_A 221 YEADRDK---------------------LVLRNGYNVTA---YTFTPSELYSKIKERIPE 256 (317)
T ss_dssp HHCCGGG---------------------CSSCSCEECCS---EEECHHHHHHHHHTTCCS
T ss_pred HhCCccc---------------------cccCceEecCC---ccccHHHHHHHHHHHCCc
Confidence 8653110 01347999985 469999999999998763
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-20 Score=201.91 Aligned_cols=209 Identities=20% Similarity=0.231 Sum_probs=137.8
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchh-h-HHHHHHhhHHHHHHHHHHHHHccCCceEEEEecc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDA-H-LKVAVSINLRATKALLEMAKEMKQLKSFVHVSTA 334 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~-~-~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~ 334 (782)
.++.++.+|++++ +++.++++++|+|||+|+.+.+.. . .++.+++|+.||.+++++|.+.+++++|||+||.
T Consensus 53 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~ 126 (322)
T 2p4h_X 53 EKLHFFNADLSNP------DSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSG 126 (322)
T ss_dssp HHEEECCCCTTCG------GGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEG
T ss_pred CceEEEecCCCCH------HHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccH
Confidence 3688899999987 788999999999999998764432 1 2358899999999999999886468999999998
Q ss_pred eec-cCC---CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEec
Q psy16243 335 YSN-CRQ---PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVR 408 (782)
Q Consensus 335 ~v~-~~~---~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvR 408 (782)
+++ +.. .+++|+...+ .. ......|. ...|+.||.++|.++.++. .|++++++|
T Consensus 127 ~~~~~~~~~~~~~~e~~~~~---~~------------~~~~~~p~-----~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lr 186 (322)
T 2p4h_X 127 SAVSFNGKDKDVLDESDWSD---VD------------LLRSVKPF-----GWNYAVSKTLAEKAVLEFGEQNGIDVVTLI 186 (322)
T ss_dssp GGTSCSSSCCSEECTTCCCC---HH------------HHHHHCCT-----THHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHcccCCCCCeecCCccccc---hh------------hhcccCcc-----cccHHHHHHHHHHHHHHHHHhcCCcEEEEc
Confidence 754 321 1334431110 00 00000110 0269999999999998763 589999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
|+.||||...+.. | .+. ..+.....|....+. . ...++++|+|+|++++.+
T Consensus 187 p~~v~g~~~~~~~--------~-----------~~~-------~~~~~~~~g~~~~~~-~--~~~~~i~v~Dva~a~~~~ 237 (322)
T 2p4h_X 187 LPFIVGRFVCPKL--------P-----------DSI-------EKALVLVLGKKEQIG-V--TRFHMVHVDDVARAHIYL 237 (322)
T ss_dssp ECEEESCCCSSSC--------C-----------HHH-------HHHTHHHHSCGGGCC-E--EEEEEEEHHHHHHHHHHH
T ss_pred CCceECCCCCCCC--------C-----------chH-------HHHHHHHhCCCccCc-C--CCcCEEEHHHHHHHHHHH
Confidence 9999998543210 0 100 011111223221111 1 234899999999999988
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
+... ...+.|| +++ .++|+.|+++.+.+..+.
T Consensus 238 ~~~~-------------------------~~~g~~~-~~~--~~~s~~e~~~~i~~~~~~ 269 (322)
T 2p4h_X 238 LENS-------------------------VPGGRYN-CSP--FIVPIEEMSQLLSAKYPE 269 (322)
T ss_dssp HHSC-------------------------CCCEEEE-CCC--EEEEHHHHHHHHHHHCTT
T ss_pred hhCc-------------------------CCCCCEE-EcC--CCCCHHHHHHHHHHhCCC
Confidence 7542 1223588 556 789999999999887643
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.4e-20 Score=204.96 Aligned_cols=204 Identities=12% Similarity=0.025 Sum_probs=154.7
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCc-----e
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLK-----S 327 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~-----~ 327 (782)
++.++.+|++++ +++.+++++ +|+|||+||..... ......+++|+.||.+++++|.+. +++ +
T Consensus 84 ~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~ 156 (381)
T 1n7h_A 84 LMKLHYADLTDA------SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVK 156 (381)
T ss_dssp CEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCE
T ss_pred ceEEEECCCCCH------HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccE
Confidence 788999999987 788888886 59999999987653 345678899999999999999886 455 9
Q ss_pred EEEEecceeccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcE
Q psy16243 328 FVHVSTAYSNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPV 404 (782)
Q Consensus 328 fV~vST~~v~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~ 404 (782)
|||+||.++|+... ++.|+... ...+.|+.||..+|.++..+. .++++
T Consensus 157 ~v~~SS~~vyg~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 207 (381)
T 1n7h_A 157 YYQAGSSEMFGSTPPPQSETTPF-----------------------------HPRSPYAASKCAAHWYTVNYREAYGLFA 207 (381)
T ss_dssp EEEEEEGGGGTTSCSSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred EEEeCcHHHhCCCCCCCCCCCCC-----------------------------CCCCchHHHHHHHHHHHHHHHHHhCCcE
Confidence 99999999998643 34443111 112789999999999998873 38999
Q ss_pred EEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCce-eeeccCCCccccccchhHHHH
Q psy16243 405 AMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLL-RSMHADPELVADMVPADNVIN 483 (782)
Q Consensus 405 ~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~VpVDdva~ 483 (782)
+++|+++++||...+ .+... ....++..+..|.. ....++++...++++|+|+|+
T Consensus 208 ~~~r~~~~~gp~~~~----------------------~~~~~--~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~ 263 (381)
T 1n7h_A 208 CNGILFNHESPRRGE----------------------NFVTR--KITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 263 (381)
T ss_dssp EEEEECCEECTTSCT----------------------TSHHH--HHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHH
T ss_pred EEEEeCceeCCCCCC----------------------cchhH--HHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHH
Confidence 999999999975321 11100 01123334445543 334678889999999999999
Q ss_pred HHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 484 CIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 484 aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+++.++... ..++||++++ .++++.|+++.+.+.++..
T Consensus 264 a~~~~~~~~--------------------------~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 301 (381)
T 1n7h_A 264 AMWLMLQQE--------------------------KPDDYVVATE--EGHTVEEFLDVSFGYLGLN 301 (381)
T ss_dssp HHHHHHTSS--------------------------SCCEEEECCS--CEEEHHHHHHHHHHHTTCC
T ss_pred HHHHHHhCC--------------------------CCCeEEeeCC--CCCcHHHHHHHHHHHcCCC
Confidence 999888542 2479999998 8999999999999988753
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.4e-20 Score=188.71 Aligned_cols=220 Identities=8% Similarity=-0.019 Sum_probs=151.5
Q ss_pred CeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCcc
Q psy16243 175 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPH 254 (782)
Q Consensus 175 k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~ 254 (782)
+.|+|||.+|+.|..+ .+.|.. .+.+|+++.|..... ..
T Consensus 5 ~~ilItGatG~iG~~l----~~~L~~---------------~g~~V~~~~r~~~~~----------------------~~ 43 (227)
T 3dhn_A 5 KKIVLIGASGFVGSAL----LNEALN---------------RGFEVTAVVRHPEKI----------------------KI 43 (227)
T ss_dssp CEEEEETCCHHHHHHH----HHHHHT---------------TTCEEEEECSCGGGC----------------------CC
T ss_pred CEEEEEcCCchHHHHH----HHHHHH---------------CCCEEEEEEcCcccc----------------------hh
Confidence 5799999544444333 233322 257899999974311 01
Q ss_pred cccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecc
Q psy16243 255 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTA 334 (782)
Q Consensus 255 ~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~ 334 (782)
...++.++.+|++++ +++.++++++|+|||+|+... ...+.+++|+.|+.+++++|++. ++++|||+||.
T Consensus 44 ~~~~~~~~~~Dl~d~------~~~~~~~~~~d~vi~~a~~~~---~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~ 113 (227)
T 3dhn_A 44 ENEHLKVKKADVSSL------DEVCEVCKGADAVISAFNPGW---NNPDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGA 113 (227)
T ss_dssp CCTTEEEECCCTTCH------HHHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCS
T ss_pred ccCceEEEEecCCCH------HHHHHHhcCCCEEEEeCcCCC---CChhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCh
Confidence 125789999999987 899999999999999998642 22236788999999999999997 78999999999
Q ss_pred eeccCC-CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecCCe
Q psy16243 335 YSNCRQ-PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSI 411 (782)
Q Consensus 335 ~v~~~~-~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp~~ 411 (782)
++++.. ....|+ .+..+ .+.|+.+|..+|.++..+ ..+++++++||+.
T Consensus 114 ~~~~~~~~~~~~~--------------------------~~~~p---~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~ 164 (227)
T 3dhn_A 114 GSLFIAPGLRLMD--------------------------SGEVP---ENILPGVKALGEFYLNFLMKEKEIDWVFFSPAA 164 (227)
T ss_dssp TTSEEETTEEGGG--------------------------TTCSC---GGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCS
T ss_pred hhccCCCCCcccc--------------------------CCcch---HHHHHHHHHHHHHHHHHHhhccCccEEEEeCCc
Confidence 766432 222221 11111 278999999999988877 3589999999999
Q ss_pred EEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhh
Q psy16243 412 VIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWN 491 (782)
Q Consensus 412 v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~ 491 (782)
+|||...+.. .. ..+..+...+++ .++++++|+|++++.++.+
T Consensus 165 v~g~~~~~~~----------------------~~------------~~~~~~~~~~~~---~~~i~~~Dva~ai~~~l~~ 207 (227)
T 3dhn_A 165 DMRPGVRTGR----------------------YR------------LGKDDMIVDIVG---NSHISVEDYAAAMIDELEH 207 (227)
T ss_dssp EEESCCCCCC----------------------CE------------EESSBCCCCTTS---CCEEEHHHHHHHHHHHHHS
T ss_pred ccCCCccccc----------------------ee------------ecCCCcccCCCC---CcEEeHHHHHHHHHHHHhC
Confidence 9997543210 00 001111122222 8999999999999999976
Q ss_pred ccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHH
Q psy16243 492 VHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKE 537 (782)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~e 537 (782)
. ...+++||++++ ++.+|++
T Consensus 208 ~------------------------~~~g~~~~~~~~--~~~~~~~ 227 (227)
T 3dhn_A 208 P------------------------KHHQERFTIGYL--EHHHHHH 227 (227)
T ss_dssp C------------------------CCCSEEEEEECC--SCCC---
T ss_pred c------------------------cccCcEEEEEee--hhcccCC
Confidence 4 246899999999 7777753
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.6e-19 Score=195.34 Aligned_cols=234 Identities=12% Similarity=0.106 Sum_probs=168.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+|+|||.+|+.|..+ .+.|... .+..+|+++.|.... .+.+.+.+.
T Consensus 19 ~~~k~vlVTGatG~iG~~l----~~~L~~~-------------~g~~~V~~~~r~~~~---~~~~~~~~~---------- 68 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCF----VRKVLDT-------------TNAKKIIVYSRDELK---QSEMAMEFN---------- 68 (344)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHHH-------------CCCSEEEEEESCHHH---HHHHHHHHC----------
T ss_pred hCCCEEEEECCCcHHHHHH----HHHHHhh-------------CCCCEEEEEECChhh---HHHHHHHhc----------
Confidence 5578999999444444333 1222211 012378899886431 122221110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceE
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSF 328 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~f 328 (782)
..++.++.+|++++ +.+.++++++|+|||+||..... ....+.+++|+.||.+++++|.+. ++++|
T Consensus 69 ----~~~v~~~~~Dl~d~------~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~ 137 (344)
T 2gn4_A 69 ----DPRMRFFIGDVRDL------ERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQV 137 (344)
T ss_dssp ----CTTEEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEE
T ss_pred ----CCCEEEEECCCCCH------HHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEE
Confidence 14789999999987 88999999999999999976532 334578999999999999999997 79999
Q ss_pred EEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC-----CCCc
Q psy16243 329 VHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG-----AGMP 403 (782)
Q Consensus 329 V~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~-----~glp 403 (782)
|++||..++.. .+.|+.||.++|.++..+. .+++
T Consensus 138 V~~SS~~~~~p-----------------------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~g~~ 176 (344)
T 2gn4_A 138 IALSTDKAANP-----------------------------------------INLYGATKLCSDKLFVSANNFKGSSQTQ 176 (344)
T ss_dssp EEECCGGGSSC-----------------------------------------CSHHHHHHHHHHHHHHHGGGCCCSSCCE
T ss_pred EEecCCccCCC-----------------------------------------ccHHHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 99999654210 1789999999999998874 5799
Q ss_pred EEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCc-eeeeccCCCccccccchhHHH
Q psy16243 404 VAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGL-LRSMHADPELVADMVPADNVI 482 (782)
Q Consensus 404 ~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~d~VpVDdva 482 (782)
++++|||+|+|+....++ .+...+..|. ...+ .+++..+++++++|+|
T Consensus 177 ~~~vRpg~v~g~~~~~i~------------------------------~~~~~~~~g~~~~~i-~~~~~~r~~i~v~D~a 225 (344)
T 2gn4_A 177 FSVVRYGNVVGSRGSVVP------------------------------FFKKLVQNKASEIPI-TDIRMTRFWITLDEGV 225 (344)
T ss_dssp EEEECCCEETTCTTSHHH------------------------------HHHHHHHHTCCCEEE-SCTTCEEEEECHHHHH
T ss_pred EEEEEeccEECCCCCHHH------------------------------HHHHHHHcCCCceEE-eCCCeEEeeEEHHHHH
Confidence 999999999996432111 2344444555 2223 3677889999999999
Q ss_pred HHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcc
Q psy16243 483 NCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAV 546 (782)
Q Consensus 483 ~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~ 546 (782)
++++.++... ..+++||++++ ++++.|+++.+.+..
T Consensus 226 ~~v~~~l~~~-------------------------~~g~~~~~~~~---~~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 226 SFVLKSLKRM-------------------------HGGEIFVPKIP---SMKMTDLAKALAPNT 261 (344)
T ss_dssp HHHHHHHHHC-------------------------CSSCEEEECCC---EEEHHHHHHHHCTTC
T ss_pred HHHHHHHhhc-------------------------cCCCEEecCCC---cEEHHHHHHHHHHhC
Confidence 9999988652 24679998664 599999999998654
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.82 E-value=4.8e-20 Score=218.57 Aligned_cols=265 Identities=14% Similarity=0.068 Sum_probs=183.4
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.++.|+|||.+|+.|..+ .+.|... .+.+|+++.|..... .+..
T Consensus 314 ~~~~VLVTGatG~IG~~l----~~~Ll~~--------------~g~~V~~~~r~~~~~------~~~~------------ 357 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHL----TERLLRE--------------DHYEVYGLDIGSDAI------SRFL------------ 357 (660)
T ss_dssp CCEEEEEETTTSHHHHHH----HHHHHHS--------------SSEEEEEEESCCTTT------GGGT------------
T ss_pred cCceEEEEcCCcHHHHHH----HHHHHhc--------------CCCEEEEEEcCchhh------hhhc------------
Confidence 467899999444443332 2233211 146789999864321 0000
Q ss_pred cccccceeEEecCCCCCCCCCCHHh-HHHHhcCceEEEEcCcccCc---hhhHHHHHHhhHHHHHHHHHHHHHccCCceE
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSED-RQTLVDNIHVVFHCAATVRF---DAHLKVAVSINLRATKALLEMAKEMKQLKSF 328 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~-~~~l~~~vdiViH~Aa~v~f---~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~f 328 (782)
...+++++.+|++++ ++ ++++++++|+|||+||.... ..+..+.+++|+.||.+++++|++. + ++|
T Consensus 358 --~~~~v~~v~~Dl~d~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~ 427 (660)
T 1z7e_A 358 --NHPHFHFVEGDISIH------SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRI 427 (660)
T ss_dssp --TCTTEEEEECCTTTC------HHHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEE
T ss_pred --cCCceEEEECCCCCc------HHHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEE
Confidence 024788999999987 43 77788899999999997653 2456678899999999999999987 5 899
Q ss_pred EEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcE
Q psy16243 329 VHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPV 404 (782)
Q Consensus 329 V~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~ 404 (782)
||+||.++|+... .+.|+....+. .| .....+.|+.||+++|+++..+. .|+++
T Consensus 428 V~~SS~~vyg~~~~~~~~E~~~~~~~--------------------~p--~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~ 485 (660)
T 1z7e_A 428 IFPSTSEVYGMCSDKYFDEDHSNLIV--------------------GP--VNKPRWIYSVSKQLLDRVIWAYGEKEGLQF 485 (660)
T ss_dssp EEECCGGGGBTCCSSSBCTTTCCEEE--------------------CC--TTCTTHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred EEEecHHHcCCCCCcccCCCcccccc--------------------Cc--ccCCCCCcHHHHHHHHHHHHHHHHHcCCCE
Confidence 9999999998643 34444210000 00 01122689999999999998762 48999
Q ss_pred EEecCCeEEeccCCCCcccccccCCcccccccCCCccccccc-ccchhhHHHHhhcCceeeeccCCCccccccchhHHHH
Q psy16243 405 AMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINN-HYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVIN 483 (782)
Q Consensus 405 ~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~ 483 (782)
+++||+.||||...+.. ++.-+ ......++..+..|....+.++++..+++++|+|+|+
T Consensus 486 ~ilRpg~v~Gp~~~~~~--------------------~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ 545 (660)
T 1z7e_A 486 TLFRPFNWMGPRLDNLN--------------------AARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE 545 (660)
T ss_dssp EEEEECSEESTTSSCHH--------------------HHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHH
T ss_pred EEECCCcccCCCccccc--------------------cccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHH
Confidence 99999999998654211 00000 0011235555666766667788889999999999999
Q ss_pred HHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCC-cccHHHHHHHHHhccccc
Q psy16243 484 CIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQK-PIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 484 aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~-~~t~~el~~~i~~~~~~~ 549 (782)
+++.++..... ...+++||++++ + ++|+.|+++.+.+.++..
T Consensus 546 ai~~~l~~~~~----------------------~~~g~~~ni~~~--~~~~s~~el~~~i~~~~g~~ 588 (660)
T 1z7e_A 546 ALYRIIENAGN----------------------RCDGEIINIGNP--ENEASIEELGEMLLASFEKH 588 (660)
T ss_dssp HHHHHHHCGGG----------------------TTTTEEEEECCG--GGEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCccc----------------------cCCCeEEEECCC--CCCcCHHHHHHHHHHHhcCC
Confidence 99988865310 124689999987 6 899999999999887754
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=197.33 Aligned_cols=210 Identities=15% Similarity=0.068 Sum_probs=154.4
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-CceEEEEcCcccCc--hhhHHHHHHhhHHHHHHHHHHHHHcc----CCceEE
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-NIHVVFHCAATVRF--DAHLKVAVSINLRATKALLEMAKEMK----QLKSFV 329 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-~vdiViH~Aa~v~f--~~~~~~~~~~Nv~gt~~Lle~a~~~~----~~~~fV 329 (782)
.++.++.+|++++ +++.++++ ++|+|||+||.... .+.....+++|+.||.+++++|++.+ ++++||
T Consensus 64 ~~~~~~~~Dl~d~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv 137 (342)
T 2hrz_A 64 GAVDARAADLSAP------GEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVV 137 (342)
T ss_dssp SEEEEEECCTTST------THHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEE
T ss_pred CceeEEEcCCCCH------HHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEE
Confidence 4688999999998 77888884 89999999997642 23566788999999999999998874 389999
Q ss_pred EEecceeccCC--CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEE
Q psy16243 330 HVSTAYSNCRQ--PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVA 405 (782)
Q Consensus 330 ~vST~~v~~~~--~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~ 405 (782)
|+||.++|+.. .++.|+... ...+.|+.||..+|.++..+ ..+++.+
T Consensus 138 ~~SS~~~~~~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 188 (342)
T 2hrz_A 138 FTSSIAVFGAPLPYPIPDEFHT-----------------------------TPLTSYGTQKAICELLLSDYSRRGFFDGI 188 (342)
T ss_dssp EEEEGGGCCSSCCSSBCTTCCC-----------------------------CCSSHHHHHHHHHHHHHHHHHHTTSCEEE
T ss_pred EeCchHhhCCCCCCCcCCCCCC-----------------------------CCcchHHHHHHHHHHHHHHHHHhcCCCce
Confidence 99999999863 245554211 11278999999999999887 3478999
Q ss_pred EecCCeEEe-ccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHH
Q psy16243 406 MVRPSIVIA-TNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINC 484 (782)
Q Consensus 406 IvRp~~v~G-~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~a 484 (782)
++|++.++| |.... +-.. .....++..+..|....++++++...++++++|+|++
T Consensus 189 ~ir~~~v~g~pg~~~----------------------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~ 244 (342)
T 2hrz_A 189 GIRLPTICIRPGKPN----------------------AAAS--GFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGF 244 (342)
T ss_dssp EEEECEETTCCSSCC----------------------CSGG--GHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHH
T ss_pred eEEeeeEEecCCCCc----------------------chhH--HHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHH
Confidence 999999998 42110 0000 0112344555566655566666778889999999999
Q ss_pred HHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 485 IISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 485 ii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
++.++...... ...+++||++ + .++|+.|+++.+.+.++..
T Consensus 245 ~~~~~~~~~~~---------------------~~~~~~~ni~-g--~~~s~~e~~~~i~~~~g~~ 285 (342)
T 2hrz_A 245 LIHGAMIDVEK---------------------VGPRRNLSMP-G--LSATVGEQIEALRKVAGEK 285 (342)
T ss_dssp HHHHHHSCHHH---------------------HCSCCEEECC-C--EEEEHHHHHHHHHHHHCHH
T ss_pred HHHHHhccccc---------------------cCCccEEEcC-C--CCCCHHHHHHHHHHHcCcc
Confidence 99888643110 0136799995 5 6799999999999988754
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3.7e-20 Score=201.08 Aligned_cols=211 Identities=14% Similarity=0.152 Sum_probs=136.4
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch-hh-HHHHHHhhHHHHHHHHHHHHHccCCceEEEEecc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD-AH-LKVAVSINLRATKALLEMAKEMKQLKSFVHVSTA 334 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~-~~-~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~ 334 (782)
.+++++.+|++++ +++.++++++|+|||+||...+. .. .++.+++|+.||.+++++|++.+++++|||+||+
T Consensus 59 ~~~~~~~~Dl~d~------~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~ 132 (338)
T 2rh8_A 59 GDLKIFRADLTDE------LSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSA 132 (338)
T ss_dssp SCEEEEECCTTTS------SSSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCH
T ss_pred CcEEEEecCCCCh------HHHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecH
Confidence 3688999999998 67788889999999999976543 22 2347899999999999999987458999999998
Q ss_pred ee-ccC---C--CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEE
Q psy16243 335 YS-NCR---Q--PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAM 406 (782)
Q Consensus 335 ~v-~~~---~--~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~I 406 (782)
++ ++. . .+++|+...++ ++ ..|. .+..+.|+.||.++|.++..+. .|+++++
T Consensus 133 ~~~~~~~~~~~~~~~~E~~~~~~-~~-----------------~~~~--~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~ 192 (338)
T 2rh8_A 133 AAVTINQLDGTGLVVDEKNWTDI-EF-----------------LTSA--KPPTWGYPASKTLAEKAAWKFAEENNIDLIT 192 (338)
T ss_dssp HHHHHHHHTCSCCCCCTTTTTCC---------------------------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEE
T ss_pred HHeecCCcCCCCcccChhhccch-hh-----------------cccc--CCccchHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 74 322 1 14455421110 00 0000 0001269999999999998763 4899999
Q ss_pred ecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccC------CCccccccchhH
Q psy16243 407 VRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHAD------PELVADMVPADN 480 (782)
Q Consensus 407 vRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~d~VpVDd 480 (782)
+||+.||||...+.. | ... ..+.....|... ..+. +....++++|+|
T Consensus 193 lrp~~v~Gp~~~~~~--------~-----------~~~-------~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~D 245 (338)
T 2rh8_A 193 VIPTLMAGSSLTSDV--------P-----------SSI-------GLAMSLITGNEF-LINGMKGMQMLSGSVSIAHVED 245 (338)
T ss_dssp EEECEEESCCSSSSC--------C-----------HHH-------HHHHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHH
T ss_pred EeCCceECCCCCCCC--------C-----------chH-------HHHHHHHcCCcc-ccccccccccccCcccEEEHHH
Confidence 999999998643211 0 100 011111222111 0110 112348999999
Q ss_pred HHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 481 VINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 481 va~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
+|++++.++... ...+.|++++ ..+++.|+++.+.+..+.
T Consensus 246 va~a~~~~~~~~-------------------------~~~~~~~~~~---~~~s~~e~~~~l~~~~~~ 285 (338)
T 2rh8_A 246 VCRAHIFVAEKE-------------------------SASGRYICCA---ANTSVPELAKFLSKRYPQ 285 (338)
T ss_dssp HHHHHHHHHHCT-------------------------TCCEEEEECS---EEECHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCC-------------------------CcCCcEEEec---CCCCHHHHHHHHHHhCCC
Confidence 999999887542 2245788765 458999999999987653
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=209.24 Aligned_cols=182 Identities=18% Similarity=0.146 Sum_probs=131.8
Q ss_pred HHhcCceEEEEcCcccCc----hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceecc-CCC--cccccccCCCC
Q psy16243 280 TLVDNIHVVFHCAATVRF----DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNC-RQP--IIEERFYEPPV 352 (782)
Q Consensus 280 ~l~~~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~-~~~--~i~E~~~~~~~ 352 (782)
.+++++|+|||+||.... .......+++|+.||.+|++++....++++|||+||+++|+ ... ++.|+...
T Consensus 197 ~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~--- 273 (516)
T 3oh8_A 197 DLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES--- 273 (516)
T ss_dssp TTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC---
T ss_pred HhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC---
Confidence 456789999999998632 24556788999999999999955555899999999999998 322 34444211
Q ss_pred ChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-CCCCcEEEecCCeEEeccCCCCcccccccCCcc
Q psy16243 353 NPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPT 431 (782)
Q Consensus 353 ~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~ 431 (782)
..+.|+.+|..+|.++..+ ..|++++|+||+.||||....
T Consensus 274 ---------------------------~~~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~~~------------ 314 (516)
T 3oh8_A 274 ---------------------------GDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGM------------ 314 (516)
T ss_dssp ---------------------------CSSHHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTBSH------------
T ss_pred ---------------------------CcChHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCCCh------------
Confidence 1278999999999887665 469999999999999974211
Q ss_pred cccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccC
Q psy16243 432 VIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLD 511 (782)
Q Consensus 432 ~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~ 511 (782)
. ..+...+..|.. ...++++...++|||+|+|++++.++...
T Consensus 315 ------------~------~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~------------------- 356 (516)
T 3oh8_A 315 ------------L------PLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDA------------------- 356 (516)
T ss_dssp ------------H------HHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCT-------------------
T ss_pred ------------H------HHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCc-------------------
Confidence 0 012222233332 35678899999999999999999988653
Q ss_pred CCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 512 KNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 512 ~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
...++||++++ +++|+.|+++.+.+.++..
T Consensus 357 ------~~~g~~ni~~~--~~~s~~el~~~i~~~~g~~ 386 (516)
T 3oh8_A 357 ------QISGPINAVAP--NPVSNADMTKILATSMHRP 386 (516)
T ss_dssp ------TCCEEEEESCS--CCEEHHHHHHHTTC-----
T ss_pred ------ccCCcEEEECC--CCCCHHHHHHHHHHHhCCC
Confidence 23568999999 8999999999999988754
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-19 Score=195.27 Aligned_cols=260 Identities=15% Similarity=0.148 Sum_probs=161.4
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
++.|+|||.+|+.|..+ .+.|+. .+.+|++++|...... +...+.+. +
T Consensus 5 ~~~vlVTGatGfIG~~l----~~~L~~---------------~G~~V~~~~r~~~~~~---~~~~~~~~----------~ 52 (337)
T 2c29_D 5 SETVCVTGASGFIGSWL----VMRLLE---------------RGYTVRATVRDPTNVK---KVKHLLDL----------P 52 (337)
T ss_dssp -CEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEEESCTTCHH---HHHHHHTS----------T
T ss_pred CCEEEEECCchHHHHHH----HHHHHH---------------CCCEEEEEECCcchhH---HHHHHHhc----------c
Confidence 57899999444433332 223322 2568888888643211 11111110 0
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch--hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEE
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD--AHLKVAVSINLRATKALLEMAKEMKQLKSFVHV 331 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~--~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~v 331 (782)
....+++++.+|++++ +++.++++++|+|||+||...+. .+..+.+++|+.||.+++++|++.+.+++|||+
T Consensus 53 ~~~~~~~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~ 126 (337)
T 2c29_D 53 KAETHLTLWKADLADE------GSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFT 126 (337)
T ss_dssp THHHHEEEEECCTTST------TTTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEE
T ss_pred cCCCeEEEEEcCCCCH------HHHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEe
Confidence 1123688999999998 67888899999999999976543 223457899999999999999987448999999
Q ss_pred eccee-ccCC---CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEE
Q psy16243 332 STAYS-NCRQ---PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVA 405 (782)
Q Consensus 332 ST~~v-~~~~---~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~ 405 (782)
||+++ ++.. ..++|+...+ .. ...... ...+.|+.||.++|.++..+. .|++++
T Consensus 127 SS~~~~~~~~~~~~~~~E~~~~~---~~------------~~~~~~-----~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ 186 (337)
T 2c29_D 127 SSAGTVNIQEHQLPVYDESCWSD---ME------------FCRAKK-----MTAWMYFVSKTLAEQAAWKYAKENNIDFI 186 (337)
T ss_dssp CCGGGTSCSSSCCSEECTTCCCC---HH------------HHHHHC-----CTTHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred eeHhhcccCCCCCcccCcccCCc---hh------------hhcccC-----CccchHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 99874 4332 2344542111 00 000000 012579999999999998763 489999
Q ss_pred EecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHH
Q psy16243 406 MVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCI 485 (782)
Q Consensus 406 IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~ai 485 (782)
++||+.||||...+.. | ... ........|... ..+.. ....+++|+|+|+++
T Consensus 187 ~lrp~~v~Gp~~~~~~--------~-----------~~~-------~~~~~~~~g~~~-~~~~~-~~~~~i~v~Dva~a~ 238 (337)
T 2c29_D 187 TIIPTLVVGPFIMSSM--------P-----------PSL-------ITALSPITGNEA-HYSII-RQGQFVHLDDLCNAH 238 (337)
T ss_dssp EEEECEEESCCSCSSC--------C-----------HHH-------HHHTHHHHTCGG-GHHHH-TEEEEEEHHHHHHHH
T ss_pred EEeCCceECCCCCCCC--------C-----------chH-------HHHHHHHcCCCc-ccccc-CCCCEEEHHHHHHHH
Confidence 9999999998643210 0 000 000001122111 11111 123499999999999
Q ss_pred HHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccc
Q psy16243 486 ISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVP 547 (782)
Q Consensus 486 i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~ 547 (782)
+.++... ...+.|++++ ..+++.|+++.+.+.++
T Consensus 239 ~~~~~~~-------------------------~~~~~~~~~~---~~~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 239 IYLFENP-------------------------KAEGRYICSS---HDCIILDLAKMLREKYP 272 (337)
T ss_dssp HHHHHCT-------------------------TCCEEEEECC---EEEEHHHHHHHHHHHCT
T ss_pred HHHhcCc-------------------------ccCceEEEeC---CCCCHHHHHHHHHHHCC
Confidence 9887542 2245676654 45899999999998764
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.6e-19 Score=195.07 Aligned_cols=204 Identities=18% Similarity=0.149 Sum_probs=149.0
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC---ceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHc-cCCceEE---
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN---IHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEM-KQLKSFV--- 329 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~---vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~-~~~~~fV--- 329 (782)
.+++++.+|++++ +++.+++++ +|+|||+||... .+..+.+++|+.||.+++++|++. +++++||
T Consensus 48 ~~~~~~~~Dl~d~------~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~ 119 (364)
T 2v6g_A 48 NPINYVQCDISDP------DDSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQT 119 (364)
T ss_dssp SCCEEEECCTTSH------HHHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEEC
T ss_pred CceEEEEeecCCH------HHHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEecc
Confidence 3688999999987 788899988 999999999764 456778899999999999999875 2689998
Q ss_pred ----EEecceeccCC----CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--
Q psy16243 330 ----HVSTAYSNCRQ----PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG-- 399 (782)
Q Consensus 330 ----~vST~~v~~~~----~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~-- 399 (782)
|+||.++||.. .++.|+.. . .+.++.| +.+|+++..+.
T Consensus 120 g~~i~~Ss~~vyg~~~~~~~~~~E~~~--------------------------~--~~~~~~y----~~~E~~~~~~~~~ 167 (364)
T 2v6g_A 120 GRKHYMGPFESYGKIESHDPPYTEDLP--------------------------R--LKYMNFY----YDLEDIMLEEVEK 167 (364)
T ss_dssp CTHHHHCCGGGTTTSCCCCSSBCTTSC--------------------------C--CSSCCHH----HHHHHHHHHHHTT
T ss_pred CceEEEechhhccccccCCCCCCcccc--------------------------C--Cccchhh----HHHHHHHHHHhhc
Confidence 89999999863 23444311 1 0113677 45888888762
Q ss_pred CC-CcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHh--hcCceeeeccCC---Cccc
Q psy16243 400 AG-MPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGA--GLGLLRSMHADP---ELVA 473 (782)
Q Consensus 400 ~g-lp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~--~~g~~~~~~~~~---~~~~ 473 (782)
.+ ++++|+||+.||||...+.. .. ..+..++..+ ..|....+++++ ....
T Consensus 168 ~~~~~~~ilRp~~v~G~~~~~~~--------------------~~----~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~ 223 (364)
T 2v6g_A 168 KEGLTWSVHRPGNIFGFSPYSMM--------------------NL----VGTLCVYAAICKHEGKVLRFTGCKAAWDGYS 223 (364)
T ss_dssp STTCEEEEEEESSEECCCTTCSS--------------------CH----HHHHHHHHHHHHHHTCCBCCCSCHHHHHSCB
T ss_pred CCCceEEEECCCceeCCCCCccc--------------------ch----HHHHHHHHHHHHhcCCceecCCCcccccccC
Confidence 35 99999999999998653211 00 0011123333 246555556666 3457
Q ss_pred cccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 474 DMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 474 d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
++++|+|+|++++.++.... ..+++||++++ .++|+.|+++.+.+.++...
T Consensus 224 ~~~~v~Dva~a~~~~~~~~~------------------------~~g~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 274 (364)
T 2v6g_A 224 DCSDADLIAEHHIWAAVDPY------------------------AKNEAFNVSNG--DVFKWKHFWKVLAEQFGVEC 274 (364)
T ss_dssp CCEEHHHHHHHHHHHHHCGG------------------------GTTEEEEECCS--CCBCHHHHHHHHHHHHTCCB
T ss_pred CCCcHHHHHHHHHHHHhCCC------------------------CCCceEEecCC--CcCCHHHHHHHHHHHhCCCC
Confidence 88888999999999886531 24679999998 88999999999999887543
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-19 Score=198.53 Aligned_cols=180 Identities=14% Similarity=0.052 Sum_probs=142.3
Q ss_pred HHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCc-eEEEEecceeccCCCcccccccCCCCC
Q psy16243 275 SEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLK-SFVHVSTAYSNCRQPIIEERFYEPPVN 353 (782)
Q Consensus 275 ~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~-~fV~vST~~v~~~~~~i~E~~~~~~~~ 353 (782)
++++.++++++|+|||+||.... ....+++++|+.|+.+++++|++. +++ +|||+||+++++.
T Consensus 37 ~~~l~~~~~~~d~Vih~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~~-------------- 100 (369)
T 3st7_A 37 EEELESALLKADFIVHLAGVNRP-EHDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQD-------------- 100 (369)
T ss_dssp HHHHHHHHHHCSEEEECCCSBCT-TCSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGSC--------------
T ss_pred HHHHHHHhccCCEEEECCcCCCC-CCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcCC--------------
Confidence 37888888899999999998764 344567789999999999999987 565 9999999998761
Q ss_pred hhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEecCCeEEeccCCCCcccccccCCcc
Q psy16243 354 PNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRPSIVIATNKEPIPGWINNHYGPT 431 (782)
Q Consensus 354 ~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~ 431 (782)
+.|+.||..+|+++..+. .+++++|+||++++|++..|..+
T Consensus 101 ----------------------------~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~--------- 143 (369)
T 3st7_A 101 ----------------------------NPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYN--------- 143 (369)
T ss_dssp ----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSS---------
T ss_pred ----------------------------CCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcc---------
Confidence 789999999999998873 48999999999999987654210
Q ss_pred cccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccC
Q psy16243 432 VIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLD 511 (782)
Q Consensus 432 ~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~ 511 (782)
+ ....++..+..|.... .++++..++++|+||+|++++.++....
T Consensus 144 ----------~------~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~l~~~~------------------ 188 (369)
T 3st7_A 144 ----------S------VIATFCYKIARNEEIQ-VNDRNVELTLNYVDDIVAEIKRAIEGTP------------------ 188 (369)
T ss_dssp ----------C------HHHHHHHHHHTTCCCC-CSCTTCEEEEEEHHHHHHHHHHHHHTCC------------------
T ss_pred ----------h------HHHHHHHHHHcCCCeE-ecCCCeEEEEEEHHHHHHHHHHHHhCCc------------------
Confidence 0 1113444555555433 3578899999999999999999987531
Q ss_pred CCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 512 KNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 512 ~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
...+++||++++ .++|+.|+++.+.+..+..
T Consensus 189 -----~~~~~~~~i~~~--~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 189 -----TIENGVPTVPNV--FKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp -----CEETTEECCSCC--EEEEHHHHHHHHHHHHHHH
T ss_pred -----ccCCceEEeCCC--CceeHHHHHHHHHHHhCCC
Confidence 112689999998 8999999999999987654
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.78 E-value=3.4e-18 Score=180.97 Aligned_cols=175 Identities=13% Similarity=0.183 Sum_probs=136.7
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceec
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSN 337 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~ 337 (782)
+++++.+|++++ +++.++++++|+|||+|+.. ... ++|+.|+.+++++|++. ++++|||+||.+++
T Consensus 46 ~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~-~~~------~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~ 111 (287)
T 2jl1_A 46 GVEVRHGDYNQP------ESLQKAFAGVSKLLFISGPH-YDN------TLLIVQHANVVKAARDA-GVKHIAYTGYAFAE 111 (287)
T ss_dssp TCEEEECCTTCH------HHHHHHTTTCSEEEECCCCC-SCH------HHHHHHHHHHHHHHHHT-TCSEEEEEEETTGG
T ss_pred CCeEEEeccCCH------HHHHHHHhcCCEEEEcCCCC-cCc------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCC
Confidence 678899999987 88999999999999999963 211 57999999999999987 78999999998764
Q ss_pred cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEeccC
Q psy16243 338 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNK 417 (782)
Q Consensus 338 ~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~~ 417 (782)
.. |..|+.+|..+|+++.. .+++++++||+.++|+..
T Consensus 112 ~~-----------------------------------------~~~y~~~K~~~E~~~~~--~~~~~~ilrp~~~~~~~~ 148 (287)
T 2jl1_A 112 ES-----------------------------------------IIPLAHVHLATEYAIRT--TNIPYTFLRNALYTDFFV 148 (287)
T ss_dssp GC-----------------------------------------CSTHHHHHHHHHHHHHH--TTCCEEEEEECCBHHHHS
T ss_pred CC-----------------------------------------CCchHHHHHHHHHHHHH--cCCCeEEEECCEeccccc
Confidence 21 15799999999999976 489999999998776320
Q ss_pred CCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccch
Q psy16243 418 EPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWN 497 (782)
Q Consensus 418 ~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 497 (782)
+ .+ +......|... .+.++...++++++|++++++.++...
T Consensus 149 ---~--------------------~~---------~~~~~~~~~~~--~~~~~~~~~~i~~~Dva~~~~~~~~~~----- 189 (287)
T 2jl1_A 149 ---N--------------------EG---------LRASTESGAIV--TNAGSGIVNSVTRNELALAAATVLTEE----- 189 (287)
T ss_dssp ---S--------------------GG---------GHHHHHHTEEE--ESCTTCCBCCBCHHHHHHHHHHHHTSS-----
T ss_pred ---h--------------------hh---------HHHHhhCCcee--ccCCCCccCccCHHHHHHHHHHHhcCC-----
Confidence 1 11 11111233322 345677889999999999999888542
Q ss_pred hhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 498 EKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
...+++||++++ .++|+.|+++.+.+.++..
T Consensus 190 -------------------~~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 220 (287)
T 2jl1_A 190 -------------------GHENKTYNLVSN--QPWTFDELAQILSEVSGKK 220 (287)
T ss_dssp -------------------SCTTEEEEECCS--SCBCHHHHHHHHHHHHSSC
T ss_pred -------------------CCCCcEEEecCC--CcCCHHHHHHHHHHHHCCc
Confidence 134689999998 8899999999999988754
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-18 Score=185.94 Aligned_cols=183 Identities=14% Similarity=0.058 Sum_probs=134.0
Q ss_pred HHhcCceEEEEcCccc------Cch-hhHHHHHHhhHHHHHHHHHHHHHcc-CCceEEEEecceeccCCC--cccccccC
Q psy16243 280 TLVDNIHVVFHCAATV------RFD-AHLKVAVSINLRATKALLEMAKEMK-QLKSFVHVSTAYSNCRQP--IIEERFYE 349 (782)
Q Consensus 280 ~l~~~vdiViH~Aa~v------~f~-~~~~~~~~~Nv~gt~~Lle~a~~~~-~~~~fV~vST~~v~~~~~--~i~E~~~~ 349 (782)
..++++|+|||+|+.. .+. ....+..+.|+.||++|+++++..+ +.+.||++||+++||... .+.|+...
T Consensus 47 ~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~ 126 (298)
T 4b4o_A 47 SGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPG 126 (298)
T ss_dssp HCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCC
T ss_pred hhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCc
Confidence 3456799999999752 122 2334678899999999999998873 344589999999998754 45554211
Q ss_pred CCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEeccCCCCcccccccCC
Q psy16243 350 PPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPGWINNHYG 429 (782)
Q Consensus 350 ~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~ 429 (782)
...+.|+.+|...|........+++++++||+.||||..
T Consensus 127 -----------------------------~~~~~~~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~------------ 165 (298)
T 4b4o_A 127 -----------------------------GDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGG------------ 165 (298)
T ss_dssp -----------------------------SCSSHHHHHHHHHHHHHCCSSSSSEEEEEEECEEECTTS------------
T ss_pred -----------------------------cccchhHHHHHHHHHHHHhhccCCceeeeeeeeEEcCCC------------
Confidence 112568888888887654446789999999999999742
Q ss_pred cccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccc
Q psy16243 430 PTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADS 509 (782)
Q Consensus 430 P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~ 509 (782)
++.. .+......|.. ...|++++.++||||||+|++++.++.+.
T Consensus 166 ------------~~~~------~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~~----------------- 209 (298)
T 4b4o_A 166 ------------GAMG------HMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALEAN----------------- 209 (298)
T ss_dssp ------------HHHH------HHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHCT-----------------
T ss_pred ------------Cchh------HHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHhCC-----------------
Confidence 2111 22233333433 34688999999999999999999988653
Q ss_pred cCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 510 LDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 510 ~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
...++||++++ +++|+.|+++.+.+.+++.
T Consensus 210 --------~~~g~yn~~~~--~~~t~~e~~~~ia~~lgrp 239 (298)
T 4b4o_A 210 --------HVHGVLNGVAP--SSATNAEFAQTFGAALGRR 239 (298)
T ss_dssp --------TCCEEEEESCS--CCCBHHHHHHHHHHHHTCC
T ss_pred --------CCCCeEEEECC--CccCHHHHHHHHHHHhCcC
Confidence 34569999999 9999999999999998864
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-18 Score=176.35 Aligned_cols=170 Identities=14% Similarity=0.138 Sum_probs=131.6
Q ss_pred cceeEEecCCCC-CCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecce
Q psy16243 257 SKMVAVTGDCLK-PGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAY 335 (782)
Q Consensus 257 ~kv~~i~gDi~~-~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~ 335 (782)
.+++++.+|+++ + +++.++++++|+|||+|+.... +.+++|+.|+.+++++|++. ++++|||+||.+
T Consensus 41 ~~~~~~~~D~~d~~------~~~~~~~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~ 108 (219)
T 3dqp_A 41 NNVKAVHFDVDWTP------EEMAKQLHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIF 108 (219)
T ss_dssp TTEEEEECCTTSCH------HHHHTTTTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTT
T ss_pred CCceEEEecccCCH------HHHHHHHcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHHh-CCCEEEEECccc
Confidence 578999999998 6 8999999999999999997652 26778999999999999987 789999999987
Q ss_pred eccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEec
Q psy16243 336 SNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 336 v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~ 415 (782)
+++... ..|.. . ...+.|+.+|..+|+++. ...+++++++||+.++|+
T Consensus 109 ~~~~~~-~~e~~-------~-----------------------~~~~~Y~~sK~~~e~~~~-~~~~i~~~ilrp~~v~g~ 156 (219)
T 3dqp_A 109 SLQPEK-WIGAG-------F-----------------------DALKDYYIAKHFADLYLT-KETNLDYTIIQPGALTEE 156 (219)
T ss_dssp TTCGGG-CCSHH-------H-----------------------HHTHHHHHHHHHHHHHHH-HSCCCEEEEEEECSEECS
T ss_pred ccCCCc-ccccc-------c-----------------------ccccHHHHHHHHHHHHHH-hccCCcEEEEeCceEecC
Confidence 765321 11100 0 012789999999999996 356899999999999986
Q ss_pred cCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhcccc
Q psy16243 416 NKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQT 495 (782)
Q Consensus 416 ~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 495 (782)
...+ .. . .++...++++++|+|++++.++....
T Consensus 157 ~~~~-----------------------~~------------------~----~~~~~~~~i~~~Dva~~i~~~l~~~~-- 189 (219)
T 3dqp_A 157 EATG-----------------------LI------------------D----INDEVSASNTIGDVADTIKELVMTDH-- 189 (219)
T ss_dssp CCCS-----------------------EE------------------E----ESSSCCCCEEHHHHHHHHHHHHTCGG--
T ss_pred CCCC-----------------------cc------------------c----cCCCcCCcccHHHHHHHHHHHHhCcc--
Confidence 3221 00 0 12567899999999999999986531
Q ss_pred chhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHH
Q psy16243 496 WNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALN 542 (782)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i 542 (782)
..+++||++++ +.+++|+.+..
T Consensus 190 ----------------------~~g~~~~i~~g---~~~~~e~~~~~ 211 (219)
T 3dqp_A 190 ----------------------SIGKVISMHNG---KTAIKEALESL 211 (219)
T ss_dssp ----------------------GTTEEEEEEEC---SEEHHHHHHTT
T ss_pred ----------------------ccCcEEEeCCC---CccHHHHHHHH
Confidence 24789999887 38888887653
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.6e-18 Score=174.99 Aligned_cols=218 Identities=14% Similarity=0.126 Sum_probs=152.8
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
..+.++.|+|||.+|+.|..+ .+.|.. .+.+|+++.|..... +.+.
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l----~~~L~~---------------~G~~V~~~~R~~~~~---~~~~------------ 62 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYL----LSELKN---------------KGHEPVAMVRNEEQG---PELR------------ 62 (236)
T ss_dssp ----CCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESSGGGH---HHHH------------
T ss_pred cCcCCCeEEEECCCChHHHHH----HHHHHh---------------CCCeEEEEECChHHH---HHHH------------
Confidence 346689999999544444333 233322 257899999975421 1111
Q ss_pred ccCcccccce-eEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceE
Q psy16243 250 KRCPHYLSKM-VAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSF 328 (782)
Q Consensus 250 ~~~~~~~~kv-~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~f 328 (782)
..++ +++.+|++ . ++.+.++++|+|||+|+.... ...+..+++|+.|+.+++++|++. ++++|
T Consensus 63 ------~~~~~~~~~~Dl~-~-------~~~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~i 126 (236)
T 3e8x_A 63 ------ERGASDIVVANLE-E-------DFSHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRF 126 (236)
T ss_dssp ------HTTCSEEEECCTT-S-------CCGGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEE
T ss_pred ------hCCCceEEEcccH-H-------HHHHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHc-CCCEE
Confidence 1267 88999998 2 355677899999999997653 567788999999999999999987 78999
Q ss_pred EEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEec
Q psy16243 329 VHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVR 408 (782)
Q Consensus 329 V~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvR 408 (782)
||+||..+... |. .+ ...+.|+.+|..+|.+++. .+++++++|
T Consensus 127 v~~SS~~~~~~-----~~--------------------------~~----~~~~~Y~~sK~~~e~~~~~--~gi~~~~lr 169 (236)
T 3e8x_A 127 IMVSSVGTVDP-----DQ--------------------------GP----MNMRHYLVAKRLADDELKR--SSLDYTIVR 169 (236)
T ss_dssp EEECCTTCSCG-----GG--------------------------SC----GGGHHHHHHHHHHHHHHHH--SSSEEEEEE
T ss_pred EEEecCCCCCC-----CC--------------------------Ch----hhhhhHHHHHHHHHHHHHH--CCCCEEEEe
Confidence 99999543321 10 00 0117899999999999984 589999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
|+.++|+.... .. .....++...++++++|+|++++.+
T Consensus 170 pg~v~~~~~~~-----------------------~~-------------------~~~~~~~~~~~~i~~~Dva~~~~~~ 207 (236)
T 3e8x_A 170 PGPLSNEESTG-----------------------KV-------------------TVSPHFSEITRSITRHDVAKVIAEL 207 (236)
T ss_dssp ECSEECSCCCS-----------------------EE-------------------EEESSCSCCCCCEEHHHHHHHHHHH
T ss_pred CCcccCCCCCC-----------------------eE-------------------EeccCCCcccCcEeHHHHHHHHHHH
Confidence 99999864321 00 1112344468899999999999999
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHH
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNE 543 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~ 543 (782)
+.... ..+++||++++ ++++.|+++.+.
T Consensus 208 ~~~~~------------------------~~g~~~~v~~~---~~~~~e~~~~i~ 235 (236)
T 3e8x_A 208 VDQQH------------------------TIGKTFEVLNG---DTPIAKVVEQLG 235 (236)
T ss_dssp TTCGG------------------------GTTEEEEEEEC---SEEHHHHHHTC-
T ss_pred hcCcc------------------------ccCCeEEEeCC---CcCHHHHHHHhc
Confidence 86531 35789999987 389999987653
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=5e-18 Score=178.34 Aligned_cols=188 Identities=15% Similarity=0.100 Sum_probs=141.3
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+|+|||.+|++|..+ .+.|.. .+.+|+++.|.....
T Consensus 3 ~k~vlVTGasg~IG~~l----a~~L~~---------------~G~~V~~~~r~~~~~----------------------- 40 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVM----RERLAP---------------MAEILRLADLSPLDP----------------------- 40 (267)
T ss_dssp EEEEEEESTTSHHHHHH----HHHTGG---------------GEEEEEEEESSCCCC-----------------------
T ss_pred CCEEEEECCCCHHHHHH----HHHHHh---------------cCCEEEEEecCCccc-----------------------
Confidence 47899999544444333 233322 256788888864311
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
...+++++.+|++++ +++.++++++|+|||+||... ..+++..+++|+.||.+++++|++. +.+++||+||
T Consensus 41 -~~~~~~~~~~Dl~d~------~~~~~~~~~~D~vi~~Ag~~~-~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS 111 (267)
T 3rft_A 41 -AGPNEECVQCDLADA------NAVNAMVAGCDGIVHLGGISV-EKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASS 111 (267)
T ss_dssp -CCTTEEEEECCTTCH------HHHHHHHTTCSEEEECCSCCS-CCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEE
T ss_pred -cCCCCEEEEcCCCCH------HHHHHHHcCCCEEEECCCCcC-cCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcc
Confidence 024788999999987 899999999999999999853 4677889999999999999999987 7899999999
Q ss_pred ceeccCCC---cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEec
Q psy16243 334 AYSNCRQP---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVR 408 (782)
Q Consensus 334 ~~v~~~~~---~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvR 408 (782)
..+++... .+.|+... ...+.|+.||+.+|.+++.+ ..+++++++|
T Consensus 112 ~~~~g~~~~~~~~~e~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr 162 (267)
T 3rft_A 112 NHTIGYYPQTERLGPDVPA-----------------------------RPDGLYGVSKCFGENLARMYFDKFGQETALVR 162 (267)
T ss_dssp GGGGTTSBTTSCBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred hHHhCCCCCCCCCCCCCCC-----------------------------CCCChHHHHHHHHHHHHHHHHHHhCCeEEEEE
Confidence 99986422 34443211 12278999999999999876 3489999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
|+.|+|+.. +++...++++++|++.++..+
T Consensus 163 ~~~v~~~~~--------------------------------------------------~~~~~~~~~~~~d~a~~~~~~ 192 (267)
T 3rft_A 163 IGSCTPEPN--------------------------------------------------NYRMLSTWFSHDDFVSLIEAV 192 (267)
T ss_dssp ECBCSSSCC--------------------------------------------------STTHHHHBCCHHHHHHHHHHH
T ss_pred eecccCCCC--------------------------------------------------CCCceeeEEcHHHHHHHHHHH
Confidence 999997311 233456789999999998888
Q ss_pred hhh
Q psy16243 489 AWN 491 (782)
Q Consensus 489 ~~~ 491 (782)
+..
T Consensus 193 ~~~ 195 (267)
T 3rft_A 193 FRA 195 (267)
T ss_dssp HHC
T ss_pred HhC
Confidence 754
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.7e-18 Score=179.12 Aligned_cols=176 Identities=15% Similarity=0.146 Sum_probs=135.2
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceec
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSN 337 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~ 337 (782)
++.++.+|++++ +.+.++++++|+|||+|+... .......+++|+.|+.+++++|++. ++++|||+||.+++
T Consensus 43 ~~~~~~~Dl~d~------~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~ 114 (267)
T 3ay3_A 43 HEEIVACDLADA------QAVHDLVKDCDGIIHLGGVSV-ERPWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTI 114 (267)
T ss_dssp TEEECCCCTTCH------HHHHHHHTTCSEEEECCSCCS-CCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGS
T ss_pred CccEEEccCCCH------HHHHHHHcCCCEEEECCcCCC-CCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHh
Confidence 578899999987 889999999999999999763 3556778999999999999999986 78999999999998
Q ss_pred cCCC---cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecCCeE
Q psy16243 338 CRQP---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIV 412 (782)
Q Consensus 338 ~~~~---~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp~~v 412 (782)
+... ++.|+. |. ...+.|+.||+.+|.++..+ ..+++++++||+.+
T Consensus 115 ~~~~~~~~~~E~~--------------------------~~---~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v 165 (267)
T 3ay3_A 115 GYYPRTTRIDTEV--------------------------PR---RPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSC 165 (267)
T ss_dssp TTSBTTSCBCTTS--------------------------CC---CCCSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBC
T ss_pred CCCCCCCCCCCCC--------------------------CC---CCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeceee
Confidence 7532 344442 11 11278999999999999876 46899999999998
Q ss_pred EeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhc
Q psy16243 413 IATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNV 492 (782)
Q Consensus 413 ~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 492 (782)
|+. | . +++...++++++|+|++++.++...
T Consensus 166 ~~~---~----------------------~-------------------------~~~~~~~~~~~~dva~~~~~~~~~~ 195 (267)
T 3ay3_A 166 FPK---P----------------------K-------------------------DARMMATWLSVDDFMRLMKRAFVAP 195 (267)
T ss_dssp SSS---C----------------------C-------------------------SHHHHHHBCCHHHHHHHHHHHHHSS
T ss_pred cCC---C----------------------C-------------------------CCCeeeccccHHHHHHHHHHHHhCC
Confidence 831 1 0 1123467899999999999888643
Q ss_pred cccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 493 HQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
.....+||+.++ .+.+|.++.+. +.++.
T Consensus 196 ------------------------~~~~~~~~~~~~--~~~~~~d~~~~--~~lg~ 223 (267)
T 3ay3_A 196 ------------------------KLGCTVVYGASA--NTESWWDNDKS--AFLGW 223 (267)
T ss_dssp ------------------------CCCEEEEEECCS--CSSCCBCCGGG--GGGCC
T ss_pred ------------------------CCCceeEecCCC--ccccccCHHHH--HHcCC
Confidence 123578888877 66777777666 44443
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-17 Score=180.20 Aligned_cols=231 Identities=14% Similarity=0.098 Sum_probs=160.1
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchh-hHHHHHHHhhcccccccccccC
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATK-ALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~-~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+.|+|||.+|+.|..+ .+.|.. .+.+|+++.|..... ...+++.++.
T Consensus 10 ~~~IlVtGatG~iG~~l----~~~L~~---------------~g~~V~~l~R~~~~~~~~~~~~~~l~------------ 58 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFV----ATASLD---------------AHRPTYILARPGPRSPSKAKIFKALE------------ 58 (346)
T ss_dssp -CCEEEECTTSHHHHHH----HHHHHH---------------TTCCEEEEECSSCCCHHHHHHHHHHH------------
T ss_pred CCeEEEECCCcHHHHHH----HHHHHH---------------CCCCEEEEECCCCCChhHHHHHHHHH------------
Confidence 56899999444444333 233321 147899999976321 1222222221
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
..+++++.||++++ +++.++++ ++|+|||+|+. .|+.++.+++++|++.+.+++||+
T Consensus 59 ---~~~v~~~~~Dl~d~------~~l~~~~~~~~~d~Vi~~a~~------------~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 59 ---DKGAIIVYGLINEQ------EAMEKILKEHEIDIVVSTVGG------------ESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp ---HTTCEEEECCTTCH------HHHHHHHHHTTCCEEEECCCG------------GGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred ---hCCcEEEEeecCCH------HHHHHHHhhCCCCEEEECCch------------hhHHHHHHHHHHHHHcCCceEEee
Confidence 24789999999987 89999999 99999999986 288899999999999844999986
Q ss_pred EecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCC
Q psy16243 331 VSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPS 410 (782)
Q Consensus 331 vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~ 410 (782)
| ++|.. ..|.. +. ...+.|+.+|+.+|+++.+ .|++++|+||+
T Consensus 118 -S---~~g~~--~~e~~---~~--------------------------~p~~~y~~sK~~~e~~l~~--~g~~~tivrpg 160 (346)
T 3i6i_A 118 -S---EFGHD--VNRAD---PV--------------------------EPGLNMYREKRRVRQLVEE--SGIPFTYICCN 160 (346)
T ss_dssp -S---CCSSC--TTTCC---CC--------------------------TTHHHHHHHHHHHHHHHHH--TTCCBEEEECC
T ss_pred -c---ccCCC--CCccC---cC--------------------------CCcchHHHHHHHHHHHHHH--cCCCEEEEEec
Confidence 4 23321 22211 00 1117899999999999987 48999999999
Q ss_pred eEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhh
Q psy16243 411 IVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAW 490 (782)
Q Consensus 411 ~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 490 (782)
.++|....... . .......+....++++++...++++++|++.+++.++.
T Consensus 161 ~~~g~~~~~~~-----------------------~-------~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~ 210 (346)
T 3i6i_A 161 SIASWPYYNNI-----------------------H-------PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVD 210 (346)
T ss_dssp EESSCCCSCC-----------------------------------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTT
T ss_pred ccccccCcccc-----------------------c-------cccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHh
Confidence 99974321100 0 00011123334577889999999999999999999886
Q ss_pred hccccchhhhhcccccccccCCCCCCCCcceEEEeec-CCCCcccHHHHHHHHHhccccc
Q psy16243 491 NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVS-STQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~-~~~~~~t~~el~~~i~~~~~~~ 549 (782)
.. ...+++||+++ + +++|+.|+++.+.+..|..
T Consensus 211 ~~------------------------~~~~~~~~i~g~~--~~~s~~e~~~~~~~~~g~~ 244 (346)
T 3i6i_A 211 DV------------------------RTLNKSVHFRPSC--NCLNINELASVWEKKIGRT 244 (346)
T ss_dssp CG------------------------GGTTEEEECCCGG--GEECHHHHHHHHHHHHTSC
T ss_pred Cc------------------------cccCeEEEEeCCC--CCCCHHHHHHHHHHHHCCC
Confidence 53 12367888873 4 7899999999999988764
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.4e-17 Score=169.25 Aligned_cols=184 Identities=16% Similarity=0.098 Sum_probs=139.3
Q ss_pred EecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEeccee
Q psy16243 262 VTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYS 336 (782)
Q Consensus 262 i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v 336 (782)
+.+|++++ +++.+++++ +|+|||+||..... +..+..+++|+.|+.+++++|++. +. +|||+||.++
T Consensus 39 ~~~Dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~ 110 (273)
T 2ggs_A 39 YKLDLTDF------PRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYV 110 (273)
T ss_dssp EECCTTSH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGG
T ss_pred ceeccCCH------HHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEeccee
Confidence 78999987 788888886 89999999987643 456678999999999999999986 45 8999999999
Q ss_pred ccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEec
Q psy16243 337 NCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 337 ~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~ 415 (782)
++... ++.|+... ...+.|+.||..+|.++.. ++.+++||+.++|+
T Consensus 111 ~~~~~~~~~e~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~----~~~~~iR~~~v~G~ 157 (273)
T 2ggs_A 111 FDGEKGNYKEEDIP-----------------------------NPINYYGLSKLLGETFALQ----DDSLIIRTSGIFRN 157 (273)
T ss_dssp SCSSSCSBCTTSCC-----------------------------CCSSHHHHHHHHHHHHHCC----TTCEEEEECCCBSS
T ss_pred EcCCCCCcCCCCCC-----------------------------CCCCHHHHHHHHHHHHHhC----CCeEEEeccccccc
Confidence 86543 44444211 1127899999999999865 67899999999972
Q ss_pred cCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhcccc
Q psy16243 416 NKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQT 495 (782)
Q Consensus 416 ~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 495 (782)
.+.. ..++..+..|......++ ..++++++|+|++++.++...
T Consensus 158 --~~~~-----------------------------~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~--- 200 (273)
T 2ggs_A 158 --KGFP-----------------------------IYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELR--- 200 (273)
T ss_dssp --SSHH-----------------------------HHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHT---
T ss_pred --cHHH-----------------------------HHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcC---
Confidence 1111 022333444544444433 789999999999999988642
Q ss_pred chhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 496 WNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
. .++||+++ +++|+.|+++.+.+.++..
T Consensus 201 ----------------------~-~g~~~i~~---~~~s~~e~~~~~~~~~g~~ 228 (273)
T 2ggs_A 201 ----------------------K-TGIIHVAG---ERISRFELALKIKEKFNLP 228 (273)
T ss_dssp ----------------------C-CEEEECCC---CCEEHHHHHHHHHHHTTCC
T ss_pred ----------------------c-CCeEEECC---CcccHHHHHHHHHHHhCCC
Confidence 1 45999986 5799999999999988754
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=4.8e-17 Score=171.92 Aligned_cols=172 Identities=10% Similarity=0.067 Sum_probs=130.1
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceec
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSN 337 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~ 337 (782)
++.++.+|++++ +++.++++++|+|||+|+.. . ..|+.++++++++|++. ++++|||+||.+++
T Consensus 45 ~~~~~~~D~~d~------~~~~~~~~~~d~vi~~a~~~-~--------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~ 108 (286)
T 2zcu_A 45 GITVRQADYGDE------AALTSALQGVEKLLLISSSE-V--------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHAD 108 (286)
T ss_dssp TCEEEECCTTCH------HHHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEEEETTTT
T ss_pred CCeEEEcCCCCH------HHHHHHHhCCCEEEEeCCCC-c--------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCC
Confidence 578899999987 88999999999999999852 1 25889999999999987 79999999998765
Q ss_pred cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEeccC
Q psy16243 338 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNK 417 (782)
Q Consensus 338 ~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~~ 417 (782)
.. |..|+.+|..+|+++... +++++++||+.++++..
T Consensus 109 ~~-----------------------------------------~~~y~~sK~~~e~~~~~~--~~~~~ilrp~~~~~~~~ 145 (286)
T 2zcu_A 109 TS-----------------------------------------PLGLADEHIETEKMLADS--GIVYTLLRNGWYSENYL 145 (286)
T ss_dssp TC-----------------------------------------CSTTHHHHHHHHHHHHHH--CSEEEEEEECCBHHHHH
T ss_pred CC-----------------------------------------cchhHHHHHHHHHHHHHc--CCCeEEEeChHHhhhhH
Confidence 10 157999999999999764 89999999987654210
Q ss_pred CCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccch
Q psy16243 418 EPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWN 497 (782)
Q Consensus 418 ~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 497 (782)
. .+......|... .+.++...++++++|++++++.++...
T Consensus 146 ------------------------~---------~~~~~~~~~~~~--~~~~~~~~~~i~~~Dva~~~~~~~~~~----- 185 (286)
T 2zcu_A 146 ------------------------A---------SAPAALEHGVFI--GAAGDGKIASATRADYAAAAARVISEA----- 185 (286)
T ss_dssp ------------------------T---------THHHHHHHTEEE--ESCTTCCBCCBCHHHHHHHHHHHHHSS-----
T ss_pred ------------------------H---------HhHHhhcCCcee--ccCCCCccccccHHHHHHHHHHHhcCC-----
Confidence 0 011111223332 445678899999999999999888642
Q ss_pred hhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 498 EKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
...+++||++++ .++|+.|+++.+.+.++..
T Consensus 186 -------------------~~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 216 (286)
T 2zcu_A 186 -------------------GHEGKVYELAGD--SAWTLTQLAAELTKQSGKQ 216 (286)
T ss_dssp -------------------SCTTCEEEECCS--SCBCHHHHHHHHHHHHSSC
T ss_pred -------------------CCCCceEEEeCC--CcCCHHHHHHHHHHHHCCC
Confidence 134689999998 8899999999999988754
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=9.6e-17 Score=166.05 Aligned_cols=232 Identities=14% Similarity=0.120 Sum_probs=157.0
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+++++|||.+|+.|..+ .+.|... ..+.+|+++.|... ++.++
T Consensus 4 ~~~ilVtGasG~iG~~l----~~~l~~~-------------~~g~~V~~~~r~~~------~~~~~-------------- 46 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIV----YKKLKEG-------------SDKFVAKGLVRSAQ------GKEKI-------------- 46 (253)
T ss_dssp CCEEEEESTTSHHHHHH----HHHHHHT-------------TTTCEEEEEESCHH------HHHHT--------------
T ss_pred CCEEEEEcCCcHHHHHH----HHHHHhc-------------CCCcEEEEEEcCCC------chhhc--------------
Confidence 57899999544444333 2233211 11468899988632 11111
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch----------------hhHHHHHHhhHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD----------------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~----------------~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ +++.++++++|+|||+|+..... +.....+++|+.|+.++++
T Consensus 47 --~~~~~~~~~D~~d~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 118 (253)
T 1xq6_A 47 --GGEADVFIGDITDA------DSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 118 (253)
T ss_dssp --TCCTTEEECCTTSH------HHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHH
T ss_pred --CCCeeEEEecCCCH------HHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHH
Confidence 13577899999987 88999999999999999975321 1112357899999999999
Q ss_pred HHHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 318 MAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 318 ~a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
+|++. ++++|||+||.+++....+. ..| . .+.|+.+|..+|.++..
T Consensus 119 ~~~~~-~~~~iv~~SS~~~~~~~~~~--~~~----------------------------~---~~~y~~sK~~~e~~~~~ 164 (253)
T 1xq6_A 119 AAKVA-GVKHIVVVGSMGGTNPDHPL--NKL----------------------------G---NGNILVWKRKAEQYLAD 164 (253)
T ss_dssp HHHHH-TCSEEEEEEETTTTCTTCGG--GGG----------------------------G---GCCHHHHHHHHHHHHHT
T ss_pred HHHHc-CCCEEEEEcCccCCCCCCcc--ccc----------------------------c---chhHHHHHHHHHHHHHh
Confidence 99987 78999999998764221100 000 0 04688999999999875
Q ss_pred cCCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccc
Q psy16243 398 GGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVP 477 (782)
Q Consensus 398 ~~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~Vp 477 (782)
.+++++++||+.++|+...... ..... ...+.+ ...++++
T Consensus 165 --~~i~~~~vrpg~v~~~~~~~~~---------------------~~~~~--------------~~~~~~---~~~~~~~ 204 (253)
T 1xq6_A 165 --SGTPYTIIRAGGLLDKEGGVRE---------------------LLVGK--------------DDELLQ---TDTKTVP 204 (253)
T ss_dssp --SSSCEEEEEECEEECSCSSSSC---------------------EEEES--------------TTGGGG---SSCCEEE
T ss_pred --CCCceEEEecceeecCCcchhh---------------------hhccC--------------CcCCcC---CCCcEEc
Confidence 5899999999999997432110 00000 000111 1245899
Q ss_pred hhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCC-CcccHHHHHHHHHhcccc
Q psy16243 478 ADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQ-KPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 478 VDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~-~~~t~~el~~~i~~~~~~ 548 (782)
++|+|++++.++.... ..+++||++++.. +++++.|+++.+.+..++
T Consensus 205 ~~Dva~~~~~~~~~~~------------------------~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 205 RADVAEVCIQALLFEE------------------------AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp HHHHHHHHHHHTTCGG------------------------GTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHcCcc------------------------ccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 9999999999886531 2468999998732 469999999999988764
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-17 Score=169.21 Aligned_cols=164 Identities=15% Similarity=0.137 Sum_probs=122.2
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch-hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEeccee
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD-AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYS 336 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~-~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v 336 (782)
+++++.+|++++ +++.+++ +|+|||+|+..... .+.++.+++|+.|+.+++++|++. ++++|||+||..+
T Consensus 47 ~~~~~~~D~~~~------~~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~ 117 (215)
T 2a35_A 47 RLDNPVGPLAEL------LPQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGA 117 (215)
T ss_dssp TEECCBSCHHHH------GGGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTC
T ss_pred CceEEeccccCH------HHHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCccc
Confidence 677889998876 5555555 89999999975432 456778899999999999999987 7899999999987
Q ss_pred ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCc-EEEecCCeEEec
Q psy16243 337 NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMP-VAMVRPSIVIAT 415 (782)
Q Consensus 337 ~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp-~~IvRp~~v~G~ 415 (782)
++.+ ++.|+.+|..+|+++... +++ ++++||+.++|+
T Consensus 118 ~~~~----------------------------------------~~~y~~sK~~~e~~~~~~--~~~~~~~vrp~~v~g~ 155 (215)
T 2a35_A 118 DAKS----------------------------------------SIFYNRVKGELEQALQEQ--GWPQLTIARPSLLFGP 155 (215)
T ss_dssp CTTC----------------------------------------SSHHHHHHHHHHHHHTTS--CCSEEEEEECCSEEST
T ss_pred CCCC----------------------------------------ccHHHHHHHHHHHHHHHc--CCCeEEEEeCceeeCC
Confidence 7531 178999999999999764 899 999999999997
Q ss_pred cCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhcccc
Q psy16243 416 NKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQT 495 (782)
Q Consensus 416 ~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 495 (782)
...+ .+...+ .....+ + ++ ...++++++|+|++++.++...
T Consensus 156 ~~~~----------------------~~~~~~----------~~~~~~-~-~~--~~~~~i~~~Dva~~~~~~~~~~--- 196 (215)
T 2a35_A 156 REEF----------------------RLAEIL----------AAPIAR-I-LP--GKYHGIEACDLARALWRLALEE--- 196 (215)
T ss_dssp TSCE----------------------EGGGGT----------TCCCC--------CHHHHHHHHHHHHHHHHHHTCC---
T ss_pred CCcc----------------------hHHHHH----------HHhhhh-c-cC--CCcCcEeHHHHHHHHHHHHhcC---
Confidence 5431 111111 011111 1 11 2678999999999999988542
Q ss_pred chhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHH
Q psy16243 496 WNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWK 536 (782)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~ 536 (782)
.+++||++++ +++++.
T Consensus 197 -----------------------~~~~~~i~~~--~~~~~~ 212 (215)
T 2a35_A 197 -----------------------GKGVRFVESD--ELRKLG 212 (215)
T ss_dssp -----------------------CSEEEEEEHH--HHHHHH
T ss_pred -----------------------CCCceEEcHH--HHHHhh
Confidence 2689999988 666554
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.66 E-value=5.8e-16 Score=165.05 Aligned_cols=230 Identities=16% Similarity=0.098 Sum_probs=158.1
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeeccc-ceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAH-LKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~-~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
++.|+|||.+|+.|..+ .+.|... + .+|+++.|....... +.+.
T Consensus 5 ~~~ilVtGatG~iG~~l----~~~L~~~---------------g~~~V~~~~R~~~~~~~-~~l~--------------- 49 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSV----ARTLLED---------------GTFKVRVVTRNPRKKAA-KELR--------------- 49 (299)
T ss_dssp CCEEEEETTTSHHHHHH----HHHHHHH---------------CSSEEEEEESCTTSHHH-HHHH---------------
T ss_pred CCEEEEECCCchHHHHH----HHHHHhc---------------CCceEEEEEcCCCCHHH-HHHH---------------
Confidence 47899999544444333 2333211 3 689999997543211 1111
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
..+++++.+|++++ +++..+++++|+|||+|+.... .....|+.++++++++|++. ++++|||+|
T Consensus 50 ---~~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~~aa~~~-gv~~iv~~S 114 (299)
T 2wm3_A 50 ---LQGAEVVQGDQDDQ------VIMELALNGAYATFIVTNYWES-----CSQEQEVKQGKLLADLARRL-GLHYVVYSG 114 (299)
T ss_dssp ---HTTCEEEECCTTCH------HHHHHHHTTCSEEEECCCHHHH-----TCHHHHHHHHHHHHHHHHHH-TCSEEEECC
T ss_pred ---HCCCEEEEecCCCH------HHHHHHHhcCCEEEEeCCCCcc-----ccchHHHHHHHHHHHHHHHc-CCCEEEEEc
Confidence 13678899999987 8999999999999999985321 01346888999999999987 899999988
Q ss_pred cceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeE
Q psy16243 333 TAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIV 412 (782)
Q Consensus 333 T~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v 412 (782)
|..+++... . .+++.|+.+|..+|+++... |++++++||+.+
T Consensus 115 ~~~~~~~~~----~--------------------------------~~~~~y~~sK~~~e~~~~~~--gi~~~ilrp~~~ 156 (299)
T 2wm3_A 115 LENIKKLTA----G--------------------------------RLAAAHFDGKGEVEEYFRDI--GVPMTSVRLPCY 156 (299)
T ss_dssp CCCHHHHTT----T--------------------------------SCCCHHHHHHHHHHHHHHHH--TCCEEEEECCEE
T ss_pred CccccccCC----C--------------------------------cccCchhhHHHHHHHHHHHC--CCCEEEEeecHH
Confidence 877654211 0 12378999999999999875 899999999999
Q ss_pred EeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCce-eeeccCCCccccccchhHHHHHHHHhhhh
Q psy16243 413 IATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLL-RSMHADPELVADMVPADNVINCIISAAWN 491 (782)
Q Consensus 413 ~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~ 491 (782)
+|+... .|... ....|.. ......++...++++++|+++++..++..
T Consensus 157 ~~~~~~-----------------------~~~~~---------~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~ 204 (299)
T 2wm3_A 157 FENLLS-----------------------HFLPQ---------KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKM 204 (299)
T ss_dssp GGGGGT-----------------------TTCCE---------ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHS
T ss_pred hhhchh-----------------------hcCCc---------ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcC
Confidence 985321 01100 0011211 11122367788999999999999988864
Q ss_pred ccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 492 VHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
... ..+++||+++ .++|+.|+++.+.+.+|+.
T Consensus 205 ~~~-----------------------~~g~~~~~~g---~~~s~~e~~~~~~~~~g~~ 236 (299)
T 2wm3_A 205 PEK-----------------------YVGQNIGLST---CRHTAEEYAALLTKHTRKV 236 (299)
T ss_dssp HHH-----------------------HTTCEEECCS---EEECHHHHHHHHHHHHSSC
T ss_pred hhh-----------------------hCCeEEEeee---ccCCHHHHHHHHHHHHCCC
Confidence 210 1357999875 4699999999999988754
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.5e-16 Score=168.95 Aligned_cols=229 Identities=15% Similarity=0.116 Sum_probs=156.9
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
++.|+|||.+|+.|..+ .+.|.. .+.+|+++.|....... +.+..
T Consensus 5 ~~~ilVtGatG~iG~~l----~~~L~~---------------~g~~V~~~~R~~~~~~~-~~l~~--------------- 49 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASL----IRVAAA---------------VGHHVRAQVHSLKGLIA-EELQA--------------- 49 (352)
T ss_dssp CCCEEEESTTSHHHHHH----HHHHHH---------------TTCCEEEEESCSCSHHH-HHHHT---------------
T ss_pred CCEEEEECCCCHHHHHH----HHHHHh---------------CCCEEEEEECCCChhhH-HHHhh---------------
Confidence 46799999444444332 222321 25788999997543211 11110
Q ss_pred ccccceeEEecC-CCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccC-CceEEEE
Q psy16243 254 HYLSKMVAVTGD-CLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQ-LKSFVHV 331 (782)
Q Consensus 254 ~~~~kv~~i~gD-i~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~-~~~fV~v 331 (782)
..+++++.+| ++++ +++.++++++|+|||+|+.... ..|+.+ ++++++|++. + +++|||+
T Consensus 50 --~~~v~~v~~D~l~d~------~~l~~~~~~~d~Vi~~a~~~~~--------~~~~~~-~~l~~aa~~~-g~v~~~V~~ 111 (352)
T 1xgk_A 50 --IPNVTLFQGPLLNNV------PLMDTLFEGAHLAFINTTSQAG--------DEIAIG-KDLADAAKRA-GTIQHYIYS 111 (352)
T ss_dssp --STTEEEEESCCTTCH------HHHHHHHTTCSEEEECCCSTTS--------CHHHHH-HHHHHHHHHH-SCCSEEEEE
T ss_pred --cCCcEEEECCccCCH------HHHHHHHhcCCEEEEcCCCCCc--------HHHHHH-HHHHHHHHHc-CCccEEEEe
Confidence 1367889999 9987 8899999999999999986431 346776 9999999987 6 8999999
Q ss_pred eccee--ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecC
Q psy16243 332 STAYS--NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRP 409 (782)
Q Consensus 332 ST~~v--~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp 409 (782)
||.++ ++. ..++.|+.||+.+|+++... +++++|+||
T Consensus 112 SS~~~~~~~~---------------------------------------~~~~~y~~sK~~~E~~~~~~--gi~~~ivrp 150 (352)
T 1xgk_A 112 SMPDHSLYGP---------------------------------------WPAVPMWAPKFTVENYVRQL--GLPSTFVYA 150 (352)
T ss_dssp ECCCGGGTSS---------------------------------------CCCCTTTHHHHHHHHHHHTS--SSCEEEEEE
T ss_pred CCccccccCC---------------------------------------CCCccHHHHHHHHHHHHHHc--CCCEEEEec
Confidence 99862 111 11278999999999999875 899999998
Q ss_pred CeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCcee-eeccCCCccccccch-hHHHHHHHH
Q psy16243 410 SIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLR-SMHADPELVADMVPA-DNVINCIIS 487 (782)
Q Consensus 410 ~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~d~VpV-Ddva~aii~ 487 (782)
+ +||+...... .| -+.. .....|... .++++++...+++++ +|++++++.
T Consensus 151 g-~~g~~~~~~~-------~~-----------~~~~---------~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~ 202 (352)
T 1xgk_A 151 G-IYNNNFTSLP-------YP-----------LFQM---------ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQ 202 (352)
T ss_dssp C-EEGGGCBSSS-------CS-----------SCBE---------EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHH
T ss_pred c-eecCCchhcc-------cc-----------cccc---------cccCCCceEEeeccCCCCceeeEecHHHHHHHHHH
Confidence 7 6786432110 00 0000 001233332 346678889999999 999999999
Q ss_pred hhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 488 AAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 488 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
++...... ..+++||+++ .++|+.|+++.+.+..+..
T Consensus 203 ~l~~~~~~----------------------~~g~~~~l~~---~~~s~~e~~~~i~~~~G~~ 239 (352)
T 1xgk_A 203 IFKDGPQK----------------------WNGHRIALTF---ETLSPVQVCAAFSRALNRR 239 (352)
T ss_dssp HHHHCHHH----------------------HTTCEEEECS---EEECHHHHHHHHHHHHTSC
T ss_pred HHhCCchh----------------------hCCeEEEEec---CCCCHHHHHHHHHHHHCCC
Confidence 88652100 1468999994 5699999999999988764
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.6e-16 Score=159.08 Aligned_cols=186 Identities=9% Similarity=-0.015 Sum_probs=126.9
Q ss_pred cceeeeeecccchhhHHHHHHHhhcccccccccccCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccC
Q psy16243 217 HLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVR 296 (782)
Q Consensus 217 ~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~ 296 (782)
+.+|+++.|.... +.++. ..+++++.+|++++ ++ +.++++|+|||+|+...
T Consensus 24 g~~V~~~~R~~~~------~~~~~---------------~~~~~~~~~D~~d~------~~--~~~~~~d~vi~~ag~~~ 74 (224)
T 3h2s_A 24 GHEVLAVVRDPQK------AADRL---------------GATVATLVKEPLVL------TE--ADLDSVDAVVDALSVPW 74 (224)
T ss_dssp TCEEEEEESCHHH------HHHHT---------------CTTSEEEECCGGGC------CH--HHHTTCSEEEECCCCCT
T ss_pred CCEEEEEEecccc------ccccc---------------CCCceEEecccccc------cH--hhcccCCEEEECCccCC
Confidence 5789999996431 22111 13788999999998 33 67789999999999852
Q ss_pred chhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceeccC-CC----cccccccCCCCChhHHHHHHHhcchhhhhh
Q psy16243 297 FDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCR-QP----IIEERFYEPPVNPNHLIQITELLNDDMIDK 371 (782)
Q Consensus 297 f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~~-~~----~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~ 371 (782)
... ...+|+.++++++++|++. + ++||++||++++.. .. ..+|...
T Consensus 75 ~~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~----------------------- 125 (224)
T 3h2s_A 75 GSG----RGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGADHPMILDFPES----------------------- 125 (224)
T ss_dssp TSS----CTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCSSCGGGGCCGG-----------------------
T ss_pred Ccc----hhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCCccccccCCCC-----------------------
Confidence 111 2467999999999999987 5 99999999865432 21 1111110
Q ss_pred hcCCccCCCCccHHHHHHHHHHHHHHc-CCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccch
Q psy16243 372 ITPGIVDYWPNTYALTKQVAEDMVRRG-GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGP 450 (782)
Q Consensus 372 ~~p~~~~~~pn~Y~~SK~~aE~ll~~~-~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~ 450 (782)
+ ...+.|+.+|..+|.+.... ..+++++++||+.++|+.. .. ++...
T Consensus 126 -----~-~~~~~y~~sK~~~e~~~~~~~~~~i~~~ivrp~~v~g~~~--~~--------------------~~~~~---- 173 (224)
T 3h2s_A 126 -----A-ASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGP--AT--------------------SYVAG---- 173 (224)
T ss_dssp -----G-GGSTTHHHHHHHHHHHHHHTTCTTSCEEEEEECSBCCCCC--CC--------------------CEEEE----
T ss_pred -----C-ccchhhHHHHHHHHHHHHHHhcCCCcEEEEcCccccCCCc--cc--------------------Cceec----
Confidence 0 01278999999999664333 5699999999999999722 11 11000
Q ss_pred hhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecC
Q psy16243 451 TGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSS 528 (782)
Q Consensus 451 ~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 528 (782)
... + ..++...++++++|+|++++.++... ...+++|++++.
T Consensus 174 --------~~~---~-~~~~~~~~~i~~~DvA~~~~~~l~~~------------------------~~~g~~~~~~~~ 215 (224)
T 3h2s_A 174 --------KDT---L-LVGEDGQSHITTGNMALAILDQLEHP------------------------TAIRDRIVVRDA 215 (224)
T ss_dssp --------SSB---C-CCCTTSCCBCCHHHHHHHHHHHHHSC------------------------CCTTSEEEEEEC
T ss_pred --------ccc---c-ccCCCCCceEeHHHHHHHHHHHhcCc------------------------cccCCEEEEecC
Confidence 000 1 11334568999999999999999764 245789999987
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.65 E-value=6.8e-16 Score=159.09 Aligned_cols=110 Identities=20% Similarity=0.161 Sum_probs=94.4
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceec
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSN 337 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~ 337 (782)
++.++.+|++++ +++.++++++|+|||+|+........+..+++|+.|+.+++++|++. +.++||++||.+++
T Consensus 64 ~~~~~~~D~~d~------~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~ 136 (242)
T 2bka_A 64 NVNQEVVDFEKL------DDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGAD 136 (242)
T ss_dssp GCEEEECCGGGG------GGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCC
T ss_pred CceEEecCcCCH------HHHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCC
Confidence 678899999987 78888899999999999976555556778899999999999999986 78999999999876
Q ss_pred cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCC-cEEEecCCeEEecc
Q psy16243 338 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGM-PVAMVRPSIVIATN 416 (782)
Q Consensus 338 ~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~gl-p~~IvRp~~v~G~~ 416 (782)
+.. .+.|+.||..+|.++... ++ +++++||+.++|+.
T Consensus 137 ~~~----------------------------------------~~~Y~~sK~~~e~~~~~~--~~~~~~~vrpg~v~~~~ 174 (242)
T 2bka_A 137 KSS----------------------------------------NFLYLQVKGEVEAKVEEL--KFDRYSVFRPGVLLCDR 174 (242)
T ss_dssp TTC----------------------------------------SSHHHHHHHHHHHHHHTT--CCSEEEEEECCEEECTT
T ss_pred CCC----------------------------------------cchHHHHHHHHHHHHHhc--CCCCeEEEcCceecCCC
Confidence 521 167999999999999875 56 59999999999974
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.7e-15 Score=160.59 Aligned_cols=175 Identities=12% Similarity=0.073 Sum_probs=128.3
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEeccee
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYS 336 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v 336 (782)
.+++++.+|++++ +++..+++++|+|||+|+..... ..|+.++++++++|++. ++++|||+||...
T Consensus 44 ~~v~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~ 109 (289)
T 3e48_A 44 GKVSVRQLDYFNQ------ESMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQS-GVAHIIFIGYYAD 109 (289)
T ss_dssp TTBEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHHT-TCCEEEEEEESCC
T ss_pred CCCEEEEcCCCCH------HHHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHHc-CCCEEEEEcccCC
Confidence 4789999999987 89999999999999999976532 34899999999999997 7999999999542
Q ss_pred ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEecc
Q psy16243 337 NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 337 ~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~ 416 (782)
... . |..+...+..+|..+... |++++|+||+.++|+.
T Consensus 110 ~~~----------~------------------------------~~~~~~~~~~~e~~~~~~--g~~~~ilrp~~~~~~~ 147 (289)
T 3e48_A 110 QHN----------N------------------------------PFHMSPYFGYASRLLSTS--GIDYTYVRMAMYMDPL 147 (289)
T ss_dssp STT----------C------------------------------CSTTHHHHHHHHHHHHHH--CCEEEEEEECEESTTH
T ss_pred CCC----------C------------------------------CCccchhHHHHHHHHHHc--CCCEEEEecccccccc
Confidence 110 0 011222233455555543 8999999999999742
Q ss_pred CCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccc
Q psy16243 417 KEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTW 496 (782)
Q Consensus 417 ~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 496 (782)
. .| +.....+.. ...+.++...++++++|+|++++.++....
T Consensus 148 ~------------------------~~----------~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--- 189 (289)
T 3e48_A 148 K------------------------PY----------LPELMNMHK-LIYPAGDGRINYITRNDIARGVIAIIKNPD--- 189 (289)
T ss_dssp H------------------------HH----------HHHHHHHTE-ECCCCTTCEEEEECHHHHHHHHHHHHHCGG---
T ss_pred H------------------------HH----------HHHHHHCCC-EecCCCCceeeeEEHHHHHHHHHHHHcCCC---
Confidence 1 11 111111111 233457888999999999999999886531
Q ss_pred hhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 497 NEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
..+++||++ + .++|+.|+++.+.+.+++.
T Consensus 190 ---------------------~~g~~~~~~-~--~~~s~~e~~~~~~~~~g~~ 218 (289)
T 3e48_A 190 ---------------------TWGKRYLLS-G--YSYDMKELAAILSEASGTE 218 (289)
T ss_dssp ---------------------GTTCEEEEC-C--EEEEHHHHHHHHHHHHTSC
T ss_pred ---------------------cCCceEEeC-C--CcCCHHHHHHHHHHHHCCc
Confidence 227899999 8 8999999999999988863
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.2e-16 Score=157.32 Aligned_cols=191 Identities=9% Similarity=0.020 Sum_probs=118.2
Q ss_pred cceeeeeecccchhhHHHHHHHhhcccccccccccCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccC
Q psy16243 217 HLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVR 296 (782)
Q Consensus 217 ~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~ 296 (782)
+.+|+++.|.... +.+. ..+++++.+|++++ ++ +.+.++|+|||+|+...
T Consensus 24 g~~V~~~~R~~~~------~~~~----------------~~~~~~~~~D~~d~------~~--~~~~~~d~vi~~ag~~~ 73 (221)
T 3ew7_A 24 GHEVTAIVRNAGK------ITQT----------------HKDINILQKDIFDL------TL--SDLSDQNVVVDAYGISP 73 (221)
T ss_dssp TCEEEEEESCSHH------HHHH----------------CSSSEEEECCGGGC------CH--HHHTTCSEEEECCCSST
T ss_pred CCEEEEEEcCchh------hhhc----------------cCCCeEEeccccCh------hh--hhhcCCCEEEECCcCCc
Confidence 5789999997431 1111 03688999999998 33 67788999999999743
Q ss_pred chhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceeccC-CC--cccccccCCCCChhHHHHHHHhcchhhhhhhc
Q psy16243 297 FDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCR-QP--IIEERFYEPPVNPNHLIQITELLNDDMIDKIT 373 (782)
Q Consensus 297 f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~~-~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 373 (782)
. ....|+.++++++++|++. +.+++|++||..++.. +. ...|+ .
T Consensus 74 ~------~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~--------------------------~ 120 (221)
T 3ew7_A 74 D------EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDEDGNTLLES--------------------------K 120 (221)
T ss_dssp T------TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC-----------------------------------------
T ss_pred c------ccchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCCCcccccc--------------------------C
Confidence 2 2467999999999999986 6899999999876543 21 11111 1
Q ss_pred CCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchh
Q psy16243 374 PGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPT 451 (782)
Q Consensus 374 p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~ 451 (782)
+.. ..+.|+.+|..+|.+.... ..+++++++||+.++|+. +..| .|.
T Consensus 121 ~~~---~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~--~~~~-------------------~~~------- 169 (221)
T 3ew7_A 121 GLR---EAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPG--ERTG-------------------DYQ------- 169 (221)
T ss_dssp -------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCCCC-----------------------------------
T ss_pred CCC---CHHHHHHHHHHHHHHHHHHhhccCccEEEEeCcceecCC--CccC-------------------ceE-------
Confidence 111 1267999999999973333 569999999999999872 1110 010
Q ss_pred hHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCC
Q psy16243 452 GIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQK 531 (782)
Q Consensus 452 ~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~ 531 (782)
..+......+++ .++++++|+|++++.++... ...+++||++++ .
T Consensus 170 ------~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~------------------------~~~g~~~~~~~~--~ 214 (221)
T 3ew7_A 170 ------IGKDHLLFGSDG---NSFISMEDYAIAVLDEIERP------------------------NHLNEHFTVAGK--L 214 (221)
T ss_dssp -----------------------CCCHHHHHHHHHHHHHSC------------------------SCTTSEEECCC----
T ss_pred ------eccccceecCCC---CceEeHHHHHHHHHHHHhCc------------------------cccCCEEEECCC--C
Confidence 001111122222 26899999999999999764 245789999988 5
Q ss_pred cccHH
Q psy16243 532 PIKWK 536 (782)
Q Consensus 532 ~~t~~ 536 (782)
+.+.+
T Consensus 215 ~~~~~ 219 (221)
T 3ew7_A 215 EHHHH 219 (221)
T ss_dssp -----
T ss_pred ccccc
Confidence 54443
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.8e-15 Score=162.01 Aligned_cols=238 Identities=15% Similarity=0.076 Sum_probs=155.0
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchh--hHHHHHHHhhccccccccccc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATK--ALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~--~~~erl~~~~~~~~f~~l~~~ 251 (782)
.+.|+|||.+|+.|..+ .+.|.. .+.+|+++.|..... ...+.++.+.
T Consensus 4 ~~~ilVtGatG~iG~~l----~~~L~~---------------~g~~V~~~~R~~~~~~~~~~~~~~~~~----------- 53 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRI----VNASIS---------------LGHPTYVLFRPEVVSNIDKVQMLLYFK----------- 53 (313)
T ss_dssp CCCEEEESTTSTTHHHH----HHHHHH---------------TTCCEEEECCSCCSSCHHHHHHHHHHH-----------
T ss_pred CCEEEEEcCCcHHHHHH----HHHHHh---------------CCCcEEEEECCCcccchhHHHHHHHHH-----------
Confidence 35799999544444333 233322 157899999975421 1112222111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEE
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHV 331 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~v 331 (782)
..+++++.+|++++ +++.++++++|+|||+|+.... ..|+.++++++++|++.+++++||+
T Consensus 54 ----~~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~--------~~~~~~~~~l~~aa~~~g~v~~~v~- 114 (313)
T 1qyd_A 54 ----QLGAKLIEASLDDH------QRLVDALKQVDVVISALAGGVL--------SHHILEQLKLVEAIKEAGNIKRFLP- 114 (313)
T ss_dssp ----TTTCEEECCCSSCH------HHHHHHHTTCSEEEECCCCSSS--------STTTTTHHHHHHHHHHSCCCSEEEC-
T ss_pred ----hCCeEEEeCCCCCH------HHHHHHHhCCCEEEECCccccc--------hhhHHHHHHHHHHHHhcCCCceEEe-
Confidence 13688999999987 8899999999999999997653 2478899999999999833999986
Q ss_pred ecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCe
Q psy16243 332 STAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSI 411 (782)
Q Consensus 332 ST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~ 411 (782)
| ++|....-.+. +. . +..+.| .+|..+|++++.. +++++++||+.
T Consensus 115 S---~~g~~~~~~~~----~~--------------------~-----p~~~~y-~sK~~~e~~~~~~--g~~~~ilrp~~ 159 (313)
T 1qyd_A 115 S---EFGMDPDIMEH----AL--------------------Q-----PGSITF-IDKRKVRRAIEAA--SIPYTYVSSNM 159 (313)
T ss_dssp S---CCSSCTTSCCC----CC--------------------S-----STTHHH-HHHHHHHHHHHHT--TCCBCEEECCE
T ss_pred c---CCcCCcccccc----CC--------------------C-----CCcchH-HHHHHHHHHHHhc--CCCeEEEEece
Confidence 3 23321100000 00 0 011568 9999999999764 79999999999
Q ss_pred EEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhh
Q psy16243 412 VIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWN 491 (782)
Q Consensus 412 v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~ 491 (782)
++|+...... ... . .....+....++++++...++++++|+++++..++..
T Consensus 160 ~~~~~~~~~~--------------------~~~-------~--~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~ 210 (313)
T 1qyd_A 160 FAGYFAGSLA--------------------QLD-------G--HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDD 210 (313)
T ss_dssp EHHHHTTTSS--------------------CTT-------C--CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTC
T ss_pred eccccccccc--------------------ccc-------c--cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhC
Confidence 8874221100 000 0 0001122223566788899999999999999988865
Q ss_pred ccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 492 VHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
.. ..+++|+++++. +++|+.|+++.+.+..|+.
T Consensus 211 ~~------------------------~~~~~~~~~g~~-~~~s~~e~~~~~~~~~g~~ 243 (313)
T 1qyd_A 211 PQ------------------------TLNKTMYIRPPM-NILSQKEVIQIWERLSEQN 243 (313)
T ss_dssp GG------------------------GSSSEEECCCGG-GEEEHHHHHHHHHHHHTCC
T ss_pred cc------------------------cCCceEEEeCCC-CccCHHHHHHHHHHhcCCC
Confidence 31 235667766431 6899999999999988754
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=6.6e-15 Score=147.30 Aligned_cols=110 Identities=14% Similarity=0.140 Sum_probs=89.2
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEeccee
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYS 336 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v 336 (782)
.+++++.+|++++ +++.++++++|+|||+|+...... ..++|+.++.+++++|++. ++++|||+||.++
T Consensus 46 ~~~~~~~~D~~~~------~~~~~~~~~~d~vi~~a~~~~~~~----~~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~ 114 (206)
T 1hdo_A 46 RPAHVVVGDVLQA------ADVDKTVAGQDAVIVLLGTRNDLS----PTTVMSEGARNIVAAMKAH-GVDKVVACTSAFL 114 (206)
T ss_dssp CCSEEEESCTTSH------HHHHHHHTTCSEEEECCCCTTCCS----CCCHHHHHHHHHHHHHHHH-TCCEEEEECCGGG
T ss_pred CceEEEEecCCCH------HHHHHHHcCCCEEEECccCCCCCC----ccchHHHHHHHHHHHHHHh-CCCeEEEEeeeee
Confidence 4788999999987 889999999999999999765311 1258999999999999987 7899999999988
Q ss_pred ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEE
Q psy16243 337 NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVI 413 (782)
Q Consensus 337 ~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~ 413 (782)
++.....+. ..+.|+.+|..+|+++.. .+++++++||+.++
T Consensus 115 ~~~~~~~~~----------------------------------~~~~y~~~K~~~e~~~~~--~~i~~~~lrp~~~~ 155 (206)
T 1hdo_A 115 LWDPTKVPP----------------------------------RLQAVTDDHIRMHKVLRE--SGLKYVAVMPPHIG 155 (206)
T ss_dssp TSCTTCSCG----------------------------------GGHHHHHHHHHHHHHHHH--TCSEEEEECCSEEE
T ss_pred ccCcccccc----------------------------------cchhHHHHHHHHHHHHHh--CCCCEEEEeCCccc
Confidence 865321000 116899999999999975 48999999999973
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=4.6e-15 Score=158.51 Aligned_cols=232 Identities=14% Similarity=0.128 Sum_probs=151.9
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchh---hHHHHHHHhhcccccccccc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATK---ALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~---~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.|+|||.+|+.|..+ .+.|+. .+.+|+++.|..... ...+.++.+.
T Consensus 4 ~~~ilVtGatG~iG~~l----~~~L~~---------------~g~~V~~l~R~~~~~~~~~~~~~~~~l~---------- 54 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHV----AKASLD---------------LGHPTFLLVRESTASSNSEKAQLLESFK---------- 54 (308)
T ss_dssp CCCEEEESTTSTTHHHH----HHHHHH---------------TTCCEEEECCCCCTTTTHHHHHHHHHHH----------
T ss_pred CCEEEEEcCCcHHHHHH----HHHHHh---------------CCCCEEEEECCcccccCHHHHHHHHHHH----------
Confidence 36799999544444333 223321 156889999975422 1111122110
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
..+++++.+|++++ +++.++++++|+|||+|+... +.++++++++|++.+++++||+
T Consensus 55 -----~~~v~~v~~D~~d~------~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~ 111 (308)
T 1qyc_A 55 -----ASGANIVHGSIDDH------ASLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEVGTVKRFFP 111 (308)
T ss_dssp -----TTTCEEECCCTTCH------HHHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCSEEEC
T ss_pred -----hCCCEEEEeccCCH------HHHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhcCCCceEee
Confidence 13688999999987 889999999999999998643 4568999999999844999985
Q ss_pred EecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCC
Q psy16243 331 VSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPS 410 (782)
Q Consensus 331 vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~ 410 (782)
|+ +|.. ..|. .+..| ..+.| .+|..+|++++.. +++++++||+
T Consensus 112 -S~---~g~~--~~~~---~~~~p-------------------------~~~~y-~sK~~~e~~~~~~--~~~~~~~r~~ 154 (308)
T 1qyc_A 112 -SE---FGND--VDNV---HAVEP-------------------------AKSVF-EVKAKVRRAIEAE--GIPYTYVSSN 154 (308)
T ss_dssp -SC---CSSC--TTSC---CCCTT-------------------------HHHHH-HHHHHHHHHHHHH--TCCBEEEECC
T ss_pred -cc---cccC--cccc---ccCCc-------------------------chhHH-HHHHHHHHHHHhc--CCCeEEEEec
Confidence 43 3321 1111 00000 01568 9999999999865 7899999999
Q ss_pred eEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhh
Q psy16243 411 IVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAW 490 (782)
Q Consensus 411 ~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 490 (782)
.++|....... .+. .....+....++++++...++++++|+++++..++.
T Consensus 155 ~~~~~~~~~~~--------------------~~~----------~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~ 204 (308)
T 1qyc_A 155 CFAGYFLRSLA--------------------QAG----------LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD 204 (308)
T ss_dssp EEHHHHTTTTT--------------------CTT----------CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS
T ss_pred eeccccccccc--------------------ccc----------ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHh
Confidence 98874321110 000 000112233456788889999999999999998875
Q ss_pred hccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 491 NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
.. ...+++|+++++. +.+|+.|+++.+.+..|+.
T Consensus 205 ~~------------------------~~~~~~~~~~g~~-~~~s~~e~~~~~~~~~g~~ 238 (308)
T 1qyc_A 205 DP------------------------RTLNKTLYLRLPA-NTLSLNELVALWEKKIDKT 238 (308)
T ss_dssp CG------------------------GGTTEEEECCCGG-GEEEHHHHHHHHHHHTTSC
T ss_pred Cc------------------------cccCeEEEEeCCC-CccCHHHHHHHHHHHhCCC
Confidence 43 1235677776431 6899999999999998864
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.2e-14 Score=155.11 Aligned_cols=182 Identities=15% Similarity=0.135 Sum_probs=126.1
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceec
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSN 337 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~ 337 (782)
+++++.+|++++ +++..+++++|+|||+|+... +.++.+++++|++.+++++||+ |+ +
T Consensus 56 ~v~~v~~D~~d~------~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~ 113 (307)
T 2gas_A 56 GVILLEGDINDH------ETLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEAGNVKKFFP-SE---F 113 (307)
T ss_dssp TCEEEECCTTCH------HHHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHHCCCSEEEC-SC---C
T ss_pred CCEEEEeCCCCH------HHHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhcCCceEEee-cc---c
Confidence 688999999987 889999999999999998654 4568899999998844999984 32 3
Q ss_pred cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEeccC
Q psy16243 338 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNK 417 (782)
Q Consensus 338 ~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~~ 417 (782)
|... .|. .+..| ..+.| .+|..+|++++.. +++++++||+.++++..
T Consensus 114 g~~~--~~~---~~~~p-------------------------~~~~y-~sK~~~e~~~~~~--~i~~~~lrp~~~~~~~~ 160 (307)
T 2gas_A 114 GLDV--DRH---DAVEP-------------------------VRQVF-EEKASIRRVIEAE--GVPYTYLCCHAFTGYFL 160 (307)
T ss_dssp SSCT--TSC---CCCTT-------------------------HHHHH-HHHHHHHHHHHHH--TCCBEEEECCEETTTTG
T ss_pred ccCc--ccc---cCCCc-------------------------chhHH-HHHHHHHHHHHHc--CCCeEEEEcceeecccc
Confidence 3211 111 00000 01578 9999999999765 79999999998876321
Q ss_pred CCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccch
Q psy16243 418 EPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWN 497 (782)
Q Consensus 418 ~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 497 (782)
.. +... . .....+....++++++...++++++|+++++..++....
T Consensus 161 ~~-----------------------~~~~-----~--~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~---- 206 (307)
T 2gas_A 161 RN-----------------------LAQL-----D--ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPN---- 206 (307)
T ss_dssp GG-----------------------TTCT-----T--CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGG----
T ss_pred cc-----------------------cccc-----c--cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcc----
Confidence 10 0000 0 000112223456678889999999999999998886431
Q ss_pred hhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 498 EKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
..+++|+++++. +.+|+.|+++.+.+..|+.
T Consensus 207 --------------------~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~ 237 (307)
T 2gas_A 207 --------------------TLNKAVHIRLPK-NYLTQNEVIALWEKKIGKT 237 (307)
T ss_dssp --------------------GTTEEEECCCGG-GEEEHHHHHHHHHHHHTSC
T ss_pred --------------------ccCceEEEeCCC-CcCCHHHHHHHHHHHhCCC
Confidence 235667765431 6899999999999988754
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2.3e-14 Score=153.97 Aligned_cols=226 Identities=15% Similarity=0.101 Sum_probs=150.5
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.+.|+|||.+|+.|..+ .+.|+. .+.+|+++.|..... .+.+.++.
T Consensus 11 ~~~ilVtGatG~iG~~l----~~~L~~---------------~g~~V~~l~R~~~~~--~~~~~~l~------------- 56 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHM----VKGSLK---------------LGHPTYVFTRPNSSK--TTLLDEFQ------------- 56 (318)
T ss_dssp CCCEEEETTTSTTHHHH----HHHHHH---------------TTCCEEEEECTTCSC--HHHHHHHH-------------
T ss_pred CCeEEEECCCchHHHHH----HHHHHH---------------CCCcEEEEECCCCch--hhHHHHhh-------------
Confidence 35799999554444333 233322 156889999975421 11222111
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
..+++++.+|++++ +++.++++++|+|||+|+... +.++++++++|++.+++++||+ |+
T Consensus 57 --~~~v~~v~~Dl~d~------~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~ 115 (318)
T 2r6j_A 57 --SLGAIIVKGELDEH------EKLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVAGNIKRFLP-SD 115 (318)
T ss_dssp --HTTCEEEECCTTCH------HHHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHHCCCCEEEC-SC
T ss_pred --cCCCEEEEecCCCH------HHHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhcCCCCEEEe-ec
Confidence 13688999999987 899999999999999998642 4568999999999844999985 43
Q ss_pred ceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEE
Q psy16243 334 AYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVI 413 (782)
Q Consensus 334 ~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~ 413 (782)
+|... .|. .+..|. .+.| .+|..+|++++.. +++++++||+.++
T Consensus 116 ---~g~~~--~~~---~~~~p~-------------------------~~~y-~sK~~~e~~~~~~--~~~~~~lr~~~~~ 159 (318)
T 2r6j_A 116 ---FGVEE--DRI---NALPPF-------------------------EALI-ERKRMIRRAIEEA--NIPYTYVSANCFA 159 (318)
T ss_dssp ---CSSCT--TTC---CCCHHH-------------------------HHHH-HHHHHHHHHHHHT--TCCBEEEECCEEH
T ss_pred ---cccCc--ccc---cCCCCc-------------------------chhH-HHHHHHHHHHHhc--CCCeEEEEcceeh
Confidence 33211 111 000000 0468 9999999999764 7999999998876
Q ss_pred eccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhcc
Q psy16243 414 ATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVH 493 (782)
Q Consensus 414 G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 493 (782)
+. +.+ .+......+....++++++...++++++|+++++..++....
T Consensus 160 ~~---------------------------~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~ 206 (318)
T 2r6j_A 160 SY---------------------------FIN------YLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR 206 (318)
T ss_dssp HH---------------------------HHH------HHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG
T ss_pred hh---------------------------hhh------hhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc
Confidence 52 111 011111122333456778889999999999999998886431
Q ss_pred ccchhhhhcccccccccCCCCCCCCcceEEEeec-CCCCcccHHHHHHHHHhccccc
Q psy16243 494 QTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVS-STQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~-~~~~~~t~~el~~~i~~~~~~~ 549 (782)
..+++|++++ + +.+|+.|+++.+.+..|+.
T Consensus 207 ------------------------~~~~~~~~~g~~--~~~s~~e~~~~~~~~~g~~ 237 (318)
T 2r6j_A 207 ------------------------ALNRVVIYRPST--NIITQLELISRWEKKIGKK 237 (318)
T ss_dssp ------------------------GTTEEEECCCGG--GEEEHHHHHHHHHHHHTCC
T ss_pred ------------------------ccCeEEEecCCC--CccCHHHHHHHHHHHhCCC
Confidence 2356777654 4 6899999999999988854
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.54 E-value=4.8e-14 Score=151.67 Aligned_cols=228 Identities=11% Similarity=0.112 Sum_probs=151.2
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeeccc-chh--hHHHHHHHhhcccccccccc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLR-ATK--ALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~-~~~--~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.|+|||.+|+.|..+ .+.|.. .+.+|+++.|.. .+. ...+.+.++.
T Consensus 4 ~~~ilVtGatG~iG~~l----~~~L~~---------------~g~~V~~~~R~~~~~~~~~~~~~l~~~~---------- 54 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFM----VRASLS---------------FSHPTFIYARPLTPDSTPSSVQLREEFR---------- 54 (321)
T ss_dssp CCCEEEETTTSTTHHHH----HHHHHH---------------TTCCEEEEECCCCTTCCHHHHHHHHHHH----------
T ss_pred ccEEEEEcCCchhHHHH----HHHHHh---------------CCCcEEEEECCcccccChHHHHHHHHhh----------
Confidence 46799999544444333 233321 157899999975 211 1112222111
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
..+++++.+|++++ +++..+++++|+|||+|+... +.++++++++|++.+++++||+
T Consensus 55 -----~~~v~~v~~D~~d~------~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~ 111 (321)
T 3c1o_A 55 -----SMGVTIIEGEMEEH------EKMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAAGNIKRFLP 111 (321)
T ss_dssp -----HTTCEEEECCTTCH------HHHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCCEEEC
T ss_pred -----cCCcEEEEecCCCH------HHHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHhCCccEEec
Confidence 13688999999987 889999999999999998643 5668999999999733999983
Q ss_pred EecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCC
Q psy16243 331 VSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPS 410 (782)
Q Consensus 331 vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~ 410 (782)
| ++|... .|. .+..| ..+.| .+|..+|++++.. +++++++||+
T Consensus 112 -S---~~g~~~--~~~---~~~~p-------------------------~~~~y-~sK~~~e~~~~~~--~~~~~~lrp~ 154 (321)
T 3c1o_A 112 -S---DFGCEE--DRI---KPLPP-------------------------FESVL-EKKRIIRRAIEAA--ALPYTYVSAN 154 (321)
T ss_dssp -S---CCSSCG--GGC---CCCHH-------------------------HHHHH-HHHHHHHHHHHHH--TCCBEEEECC
T ss_pred -c---ccccCc--ccc---ccCCC-------------------------cchHH-HHHHHHHHHHHHc--CCCeEEEEec
Confidence 3 233211 111 00000 01579 9999999999764 7899999999
Q ss_pred eEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHH---HhhcCceeeeccCCCccccccchhHHHHHHHH
Q psy16243 411 IVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVA---GAGLGLLRSMHADPELVADMVPADNVINCIIS 487 (782)
Q Consensus 411 ~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~ 487 (782)
.++++.. +. +.. ....+......++++...++++++|+++++..
T Consensus 155 ~~~~~~~---------------------------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 201 (321)
T 3c1o_A 155 CFGAYFV---------------------------NY------LLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIK 201 (321)
T ss_dssp EEHHHHH---------------------------HH------HHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHH
T ss_pred eeccccc---------------------------cc------cccccccccccCceEEecCCCcceeEeeHHHHHHHHHH
Confidence 8876311 00 000 00122223456678889999999999999999
Q ss_pred hhhhccccchhhhhcccccccccCCCCCCCCcceEEEeec-CCCCcccHHHHHHHHHhccccc
Q psy16243 488 AAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVS-STQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 488 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~-~~~~~~t~~el~~~i~~~~~~~ 549 (782)
++.... ..+++|++++ + +++|+.|+++.+.+..|+.
T Consensus 202 ~l~~~~------------------------~~g~~~~~~g~~--~~~t~~e~~~~~~~~~g~~ 238 (321)
T 3c1o_A 202 VACDPR------------------------CCNRIVIYRPPK--NIISQNELISLWEAKSGLS 238 (321)
T ss_dssp HHHCGG------------------------GTTEEEECCCGG--GEEEHHHHHHHHHHHHTSC
T ss_pred HHhCcc------------------------ccCeEEEEeCCC--CcccHHHHHHHHHHHcCCc
Confidence 886531 2357777764 4 6899999999999988864
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.4e-13 Score=144.85 Aligned_cols=239 Identities=16% Similarity=0.122 Sum_probs=157.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++ .
T Consensus 14 l~~k~vlITGasggiG~~~----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~-~---------- 61 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETT----AKLFVR---------------YGAKVVIADIADDH--GQKVCNNI-G---------- 61 (278)
T ss_dssp TTTCEEEEESTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHH-C----------
T ss_pred ccCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEcCChhH--HHHHHHHh-C----------
Confidence 5679999999544433332 233322 25678888775321 11111111 0
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc---------hhhHHHHHHhhHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF---------DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~L 315 (782)
. ..++.++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.|+.++
T Consensus 62 --~-~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l 132 (278)
T 2bgk_A 62 --S-PDVISFVHCDVTKD------EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 132 (278)
T ss_dssp --C-TTTEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHH
T ss_pred --C-CCceEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHH
Confidence 0 12688999999987 77777766 68999999996532 145667899999999999
Q ss_pred HHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 316 LEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 316 le~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
++++... .+..++|++||..++.... .....|+.||+..|
T Consensus 133 ~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------------------------------------~~~~~Y~~sK~a~~ 175 (278)
T 2bgk_A 133 AKHAARVMIPAKKGSIVFTASISSFTAGE-------------------------------------GVSHVYTATKHAVL 175 (278)
T ss_dssp HHHHHHHHGGGTCEEEEEECCGGGTCCCT-------------------------------------TSCHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCeEEEEeeccccCCCC-------------------------------------CCCcchHHHHHHHH
Confidence 9987653 2567999999997764311 01167999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeecc
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHA 467 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~ 467 (782)
.+++.. ..|+++.++|||.++++...... + ........+..+
T Consensus 176 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------------------~------~~~~~~~~~~~~------- 222 (278)
T 2bgk_A 176 GLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVF--------------------G------VDSSRVEELAHQ------- 222 (278)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSS--------------------S------CCHHHHHHHHHH-------
T ss_pred HHHHHHHHHHhhcCcEEEEEEeceecchhhhhhc--------------------c------cchhHHHHhhhc-------
Confidence 998776 25899999999999986432111 0 000111111111
Q ss_pred CCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhc
Q psy16243 468 DPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKA 545 (782)
Q Consensus 468 ~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~ 545 (782)
.+.....+++++|+|++++.++..... ...+++|++.++ ..+++.|+++.+.+.
T Consensus 223 ~~~~~~~~~~~~dva~~~~~l~~~~~~----------------------~~~G~~~~v~gg--~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 223 AANLKGTLLRAEDVADAVAYLAGDESK----------------------YVSGLNLVIDGG--YTRTNPAFPTALKHG 276 (278)
T ss_dssp TCSSCSCCCCHHHHHHHHHHHHSGGGT----------------------TCCSCEEEESTT--GGGCCTHHHHHSCSC
T ss_pred ccccccccCCHHHHHHHHHHHcCcccc----------------------cCCCCEEEECCc--ccccCCccchhhhhh
Confidence 011223578899999999888754311 235789999998 789999999887654
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.5e-14 Score=148.21 Aligned_cols=129 Identities=18% Similarity=0.148 Sum_probs=91.1
Q ss_pred EecCCCCCCCCCCHHhHHHHhc----CceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHc---cCCceEEEEecc
Q psy16243 262 VTGDCLKPGVGINSEDRQTLVD----NIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEM---KQLKSFVHVSTA 334 (782)
Q Consensus 262 i~gDi~~~~lGl~~~~~~~l~~----~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~---~~~~~fV~vST~ 334 (782)
+.+|++++ ++++.+++ ++|+|||+||......+.+..+++|+.|+.++++++... .+.+++|++||.
T Consensus 42 ~~~D~~~~------~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 115 (255)
T 2dkn_A 42 LSTPGGRE------TAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI 115 (255)
T ss_dssp TTSHHHHH------HHHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred ccCCcccH------HHHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc
Confidence 56777766 66777775 789999999987645667889999999999999987653 246899999999
Q ss_pred eeccCCC---cccccccCCCCChhHHHHHHHhcchhhh----hhhcCCccCCCCccHHHHHHHHHHHHHHcC-----CCC
Q psy16243 335 YSNCRQP---IIEERFYEPPVNPNHLIQITELLNDDMI----DKITPGIVDYWPNTYALTKQVAEDMVRRGG-----AGM 402 (782)
Q Consensus 335 ~v~~~~~---~i~E~~~~~~~~~~~~~~~~~~l~~~~~----~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~-----~gl 402 (782)
.+++... ...|.. ...+++.. +...+ ..+.|+.||+.+|.++..+. .|+
T Consensus 116 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~-----~~~~Y~~sK~a~~~~~~~~~~~~~~~gi 176 (255)
T 2dkn_A 116 AATQPGAAELPMVEAM--------------LAGDEARAIELAEQQGQ-----THLAYAGSKYAVTCLARRNVVDWAGRGV 176 (255)
T ss_dssp GGGSTTGGGCHHHHHH--------------HHTCHHHHHHHHHHHCC-----HHHHHHHHHHHHHHHHHHTHHHHHHTTC
T ss_pred ccccccccccchhhhh--------------cccchhhhhhhccccCC-----cchhHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 8886532 111110 00000000 00001 11689999999999998762 589
Q ss_pred cEEEecCCeEEec
Q psy16243 403 PVAMVRPSIVIAT 415 (782)
Q Consensus 403 p~~IvRp~~v~G~ 415 (782)
+++++||+.++|+
T Consensus 177 ~v~~v~pg~v~~~ 189 (255)
T 2dkn_A 177 RLNVVAPGAVETP 189 (255)
T ss_dssp EEEEEEECCBCSH
T ss_pred EEEEEcCCcccch
Confidence 9999999999985
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2.6e-13 Score=140.80 Aligned_cols=167 Identities=17% Similarity=0.158 Sum_probs=115.6
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 9 ~~~~~vlVtGasggiG~~l----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~---------- 57 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEI----AITFAT---------------AGASVVVSDINADA--ANHVVDEIQQ---------- 57 (255)
T ss_dssp CTTCEEEETTTTSHHHHHH----HHHHHT---------------TTCEEEEEESCHHH--HHHHHHHHHH----------
T ss_pred CCCCEEEEECCccHHHHHH----HHHHHH---------------CCCEEEEEcCCHHH--HHHHHHHHHH----------
Confidence 4578999999544433332 233322 25678888886431 1122222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ ++++++++ ++|+|||+||.... .+.++..+++|+.|+.+++++
T Consensus 58 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~ 128 (255)
T 1fmc_A 58 ---LGGQAFACRCDITSE------QELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQL 128 (255)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred ---hCCceEEEEcCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHH
Confidence 113678899999987 77777776 78999999997543 244567889999999999998
Q ss_pred HHH---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKE---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+.. ..+..++|++||..++.... ..+.|+.||...|.++
T Consensus 129 ~~~~~~~~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~ 170 (255)
T 1fmc_A 129 VAPEMEKNGGGVILTITSMAAENKNI--------------------------------------NMTSYASSKAAASHLV 170 (255)
T ss_dssp HHHHHHHHTCEEEEEECCGGGTCCCT--------------------------------------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcEEEEEcchhhcCCCC--------------------------------------CCcccHHHHHHHHHHH
Confidence 752 12578999999987654211 1168999999999998
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.+ ..++++.++|||.++++.
T Consensus 171 ~~~~~~~~~~~i~v~~v~Pg~v~t~~ 196 (255)
T 1fmc_A 171 RNMAFDLGEKNIRVNGIAPGAILTDA 196 (255)
T ss_dssp HHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred HHHHHHhhhcCcEEEEEecccCcchh
Confidence 776 358999999999998753
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.42 E-value=6.9e-13 Score=139.99 Aligned_cols=238 Identities=15% Similarity=0.054 Sum_probs=146.7
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..++.|..+ .+.|.. .+.+|+++.|..... .+...+
T Consensus 4 ~~k~vlVTGas~gIG~~~----a~~l~~---------------~G~~V~~~~r~~~~~--~~~~~~-------------- 48 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAI----AEAAVA---------------AGDTVIGTARRTEAL--DDLVAA-------------- 48 (281)
T ss_dssp CCCEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEEESSGGGG--HHHHHH--------------
T ss_pred CCcEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHHHH--HHHHHh--------------
Confidence 368999999544444333 233322 256888888864321 111111
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHH----HHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRA----TKA 314 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~g----t~~ 314 (782)
...++.++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.| ++.
T Consensus 49 --~~~~~~~~~~Dv~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 120 (281)
T 3m1a_A 49 --YPDRAEAISLDVTDG------ERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRA 120 (281)
T ss_dssp --CTTTEEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred --ccCCceEEEeeCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 123788999999998 77777766 67999999997532 24456788999999 555
Q ss_pred HHHHHHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 315 LLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 315 Lle~a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++..+++. +..++|++||...+... +..+.|+.||+..|.+
T Consensus 121 ~~~~~~~~-~~~~iv~~sS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~ 161 (281)
T 3m1a_A 121 LLPQMRER-GSGSVVNISSFGGQLSF--------------------------------------AGFSAYSATKAALEQL 161 (281)
T ss_dssp HHHHHHHH-TCEEEEEECCGGGTCCC--------------------------------------TTCHHHHHHHHHHHHH
T ss_pred HHHHHHhc-CCCEEEEEcCccccCCC--------------------------------------CCchHHHHHHHHHHHH
Confidence 55555664 67899999998654321 0116899999999999
Q ss_pred HHHc-----CCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccc-cccccchhhHHHHhhcCceeeeccC
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGW-INNHYGPTGIVAGAGLGLLRSMHAD 468 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw-~~~~~~~~~~~~~~~~g~~~~~~~~ 468 (782)
.+.+ ..|+++.++|||.+.++...+.. .. ..... ........+.. ...
T Consensus 162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------------------~~~~~~~~---~~~~~~~~~~~---~~~ 215 (281)
T 3m1a_A 162 SEGLADEVAPFGIKVLIVEPGAFRTNLFGKGA--------------------AYFSEENP---AYAEKVGPTRQ---LVQ 215 (281)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBCCTTTCCCC--------------------EEECCBCT---TTHHHHHHHHH---HHH
T ss_pred HHHHHHHhhccCcEEEEEecCccccccccccc--------------------cccCCcch---hhHHHhHHHHH---HHh
Confidence 8766 25899999999999876433211 00 00000 00000000000 001
Q ss_pred CCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhc
Q psy16243 469 PELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKA 545 (782)
Q Consensus 469 ~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~ 545 (782)
......+++++|+|++++.++... ..+..|+++++ ......+....+.+.
T Consensus 216 ~~~~~~~~~~~dva~a~~~~~~~~-------------------------~~~~~~~l~s~--~~~~i~g~~~~i~~~ 265 (281)
T 3m1a_A 216 GSDGSQPGDPAKAAAAIRLALDTE-------------------------KTPLRLALGGD--AVDFLTGHLDSVRAE 265 (281)
T ss_dssp C-----CBCHHHHHHHHHHHHHSS-------------------------SCCSEEEESHH--HHHHHHHHHHHHHHH
T ss_pred hccCCCCCCHHHHHHHHHHHHhCC-------------------------CCCeEEecCch--HHHHHHHHHHHHHHH
Confidence 122345677999999999988653 34578999987 555555555555443
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-12 Score=139.92 Aligned_cols=239 Identities=14% Similarity=0.102 Sum_probs=151.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..++.|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 24 l~~k~vlITGasggiG~~l----a~~L~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~---------- 72 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGM----TTLLSS---------------LGAQCVIASRKMDV--LKATAEQISS---------- 72 (302)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH----------
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHH----------
Confidence 5679999999544443332 233322 25678888886421 2222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
....++.++.+|++++ ++++.+++. +|+|||+||.... .+.++..+++|+.|+.++++
T Consensus 73 --~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 144 (302)
T 1w6u_A 73 --QTGNKVHAIQCDVRDP------DMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTL 144 (302)
T ss_dssp --HHSSCEEEEECCTTCH------HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --hcCCceEEEEeCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence 0023688999999987 777776654 4999999996432 24456789999999999988
Q ss_pred HHHHc----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKEM----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+... .+..++|++||.+++.... ....|+.||...|.
T Consensus 145 ~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~ 186 (302)
T 1w6u_A 145 EIGKQLIKAQKGAAFLSITTIYAETGSG--------------------------------------FVVPSASAKAGVEA 186 (302)
T ss_dssp HHHHHHHHTTCCEEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcccccccCCC--------------------------------------CcchhHHHHHHHHH
Confidence 87532 2457999999987653210 11689999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEeccCC-CCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeecc
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIATNKE-PIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHA 467 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~~~~-p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~ 467 (782)
+++.+ ..|+++.++|||.+.++... ... | .+ .....+..+
T Consensus 187 ~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~--------~-----------~~--------~~~~~~~~~------- 232 (302)
T 1w6u_A 187 MSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLD--------P-----------TG--------TFEKEMIGR------- 232 (302)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCC------CC--------T-----------TS--------HHHHHHHTT-------
T ss_pred HHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcc--------c-----------ch--------hhHHHHHhc-------
Confidence 98776 25899999999999875211 000 0 00 000111111
Q ss_pred CCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccc
Q psy16243 468 DPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVP 547 (782)
Q Consensus 468 ~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~ 547 (782)
.....+++++|+|++++.++..... ...+.+|++.++ ..+++.++++.+.+..+
T Consensus 233 --~p~~~~~~~~dva~~~~~l~~~~~~----------------------~~~G~~~~v~gg--~~~~~~~~~~~~~~~~g 286 (302)
T 1w6u_A 233 --IPCGRLGTVEELANLAAFLCSDYAS----------------------WINGAVIKFDGG--EEVLISGEFNDLRKVTK 286 (302)
T ss_dssp --CTTSSCBCHHHHHHHHHHHTSGGGT----------------------TCCSCEEEESTT--HHHHHHSTTGGGGGCCH
T ss_pred --CCcCCCCCHHHHHHHHHHHcCCccc----------------------ccCCCEEEECCC--eeeccCCccccchhhcc
Confidence 1112467899999999888754311 135789999988 67777777766665543
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.4e-12 Score=130.62 Aligned_cols=156 Identities=14% Similarity=0.185 Sum_probs=108.1
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.|+++|||.+|..|..+ .+.|.. ..+.+|+++.|.... +++++.
T Consensus 5 mk~vlVtGasg~iG~~~----~~~l~~--------------~~g~~V~~~~r~~~~-----~~~~~~------------- 48 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXL----TATLLT--------------YTDMHITLYGRQLKT-----RIPPEI------------- 48 (221)
T ss_dssp CSEEEEESTTSHHHHHH----HHHHHH--------------HCCCEEEEEESSHHH-----HSCHHH-------------
T ss_pred EEEEEEEeCCcHHHHHH----HHHHHh--------------cCCceEEEEecCccc-----cchhhc-------------
Confidence 46799999544444333 233320 125688899886320 111110
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
....++.++.+|++++ +++.++++++|+|||+|+.. |+. ++++++++++. +.++||++||
T Consensus 49 ~~~~~~~~~~~D~~d~------~~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~~-~~~~iv~iSs 108 (221)
T 3r6d_A 49 IDHERVTVIEGSFQNP------GXLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSRX-NIRRVIGVSM 108 (221)
T ss_dssp HTSTTEEEEECCTTCH------HHHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHHT-TCCEEEEEEE
T ss_pred cCCCceEEEECCCCCH------HHHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHhc-CCCeEEEEee
Confidence 0124788999999987 89999999999999999864 444 89999999986 7899999999
Q ss_pred ceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEE
Q psy16243 334 AYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVI 413 (782)
Q Consensus 334 ~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~ 413 (782)
.++++..+.....++ .+ ...+.|+.+|..+|.+++. .+++++++|||.++
T Consensus 109 ~~~~~~~~~~~~~~~------------------------~~----~~~~~y~~~K~~~e~~~~~--~~i~~~~vrpg~v~ 158 (221)
T 3r6d_A 109 AGLSGEFPVALEKWT------------------------FD----NLPISYVQGERQARNVLRE--SNLNYTILRLTWLY 158 (221)
T ss_dssp TTTTSCSCHHHHHHH------------------------HH----TSCHHHHHHHHHHHHHHHH--SCSEEEEEEECEEE
T ss_pred ceecCCCCccccccc------------------------cc----ccccHHHHHHHHHHHHHHh--CCCCEEEEechhhc
Confidence 988764321000000 00 0113899999999999976 48999999999999
Q ss_pred ec
Q psy16243 414 AT 415 (782)
Q Consensus 414 G~ 415 (782)
++
T Consensus 159 ~~ 160 (221)
T 3r6d_A 159 ND 160 (221)
T ss_dssp CC
T ss_pred CC
Confidence 75
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.9e-12 Score=130.66 Aligned_cols=153 Identities=15% Similarity=0.158 Sum_probs=98.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeeccc-ceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAH-LKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~-~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
...|+|+|||.+|..|..+ .+.|.. .+ .+|.++.|..... .+
T Consensus 21 ~~mk~vlVtGatG~iG~~l----~~~L~~---------------~G~~~V~~~~R~~~~~------~~------------ 63 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHV----INQLAD---------------KQTIKQTLFARQPAKI------HK------------ 63 (236)
T ss_dssp -CCEEEEEETTTSHHHHHH----HHHHTT---------------CTTEEEEEEESSGGGS------CS------------
T ss_pred CcccEEEEEeCCcHHHHHH----HHHHHh---------------CCCceEEEEEcChhhh------cc------------
Confidence 3467899999544444333 233322 14 6888998864311 00
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
....++.++.+|++++ ++++++++++|+|||+|+...+. .+++++++++++. ++++||+
T Consensus 64 ---~~~~~~~~~~~Dl~d~------~~~~~~~~~~D~vv~~a~~~~~~-----------~~~~~~~~~~~~~-~~~~iV~ 122 (236)
T 3qvo_A 64 ---PYPTNSQIIMGDVLNH------AALKQAMQGQDIVYANLTGEDLD-----------IQANSVIAAMKAC-DVKRLIF 122 (236)
T ss_dssp ---SCCTTEEEEECCTTCH------HHHHHHHTTCSEEEEECCSTTHH-----------HHHHHHHHHHHHT-TCCEEEE
T ss_pred ---cccCCcEEEEecCCCH------HHHHHHhcCCCEEEEcCCCCchh-----------HHHHHHHHHHHHc-CCCEEEE
Confidence 0124788999999987 89999999999999999864321 3478999999987 7899999
Q ss_pred EecceeccCCCc--ccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEec
Q psy16243 331 VSTAYSNCRQPI--IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVR 408 (782)
Q Consensus 331 vST~~v~~~~~~--i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvR 408 (782)
+||..+++.... ..+. + ..+..+...|..+|..+. ..+++++++|
T Consensus 123 iSS~~~~~~~~~~~~~~~--~-----------------------------~~~~~~~~~~~~~~~~l~--~~gi~~~~vr 169 (236)
T 3qvo_A 123 VLSLGIYDEVPGKFVEWN--N-----------------------------AVIGEPLKPFRRAADAIE--ASGLEYTILR 169 (236)
T ss_dssp ECCCCC-----------------------------------------------CGGGHHHHHHHHHHH--TSCSEEEEEE
T ss_pred EecceecCCCCcccccch--h-----------------------------hcccchHHHHHHHHHHHH--HCCCCEEEEe
Confidence 999998875321 1000 0 001223344455566664 3589999999
Q ss_pred CCeEEec
Q psy16243 409 PSIVIAT 415 (782)
Q Consensus 409 p~~v~G~ 415 (782)
||.++++
T Consensus 170 Pg~i~~~ 176 (236)
T 3qvo_A 170 PAWLTDE 176 (236)
T ss_dssp ECEEECC
T ss_pred CCcccCC
Confidence 9999975
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.38 E-value=5.2e-12 Score=131.41 Aligned_cols=169 Identities=17% Similarity=0.177 Sum_probs=114.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 11 l~~k~vlItGasggiG~~l----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~---------- 59 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLAC----VTALAE---------------AGARVIIADLDEAM--ATKAVEDLRM---------- 59 (260)
T ss_dssp CTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh----------
Confidence 4578999999544444333 233322 25678888886431 1111222111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----c----hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----F----DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++++++++ .+|+|||+|+... + .+.+...+++|+.|+.+++
T Consensus 60 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 130 (260)
T 3awd_A 60 ---EGHDVSSVVMDVTNT------ESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSC 130 (260)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---cCCceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHH
Confidence 113688999999987 77777765 6899999999643 1 1345678899999999999
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+++... .+..++|++||.+.+.... . .....|+.||...|.
T Consensus 131 ~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------------------------~---~~~~~Y~~sK~a~~~ 174 (260)
T 3awd_A 131 QAVGRIMLEQKQGVIVAIGSMSGLIVNR---------------------------------P---QQQAAYNASKAGVHQ 174 (260)
T ss_dssp HHHHHHHHHHTCEEEEEECCGGGTSCCS---------------------------------S---SCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCEEEEEecchhcccCC---------------------------------C---CCccccHHHHHHHHH
Confidence 887542 2568999999987543210 0 001679999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
++..+ ..|+++.++|||.++++.
T Consensus 175 ~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 202 (260)
T 3awd_A 175 YIRSLAAEWAPHGIRANAVAPTYIETTL 202 (260)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred HHHHHHHHhhhcCeEEEEEEeeeeccch
Confidence 98775 258999999999998853
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=4e-12 Score=130.88 Aligned_cols=163 Identities=19% Similarity=0.172 Sum_probs=112.6
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..++.|..+ .+.|.. .+.+|+++.|.... . +.+.+.
T Consensus 5 ~~~~~vlVTGasggiG~~~----a~~l~~---------------~G~~V~~~~r~~~~--~-~~~~~~------------ 50 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDT----VKALHA---------------SGAKVVAVTRTNSD--L-VSLAKE------------ 50 (244)
T ss_dssp CTTCEEEEESTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--H-HHHHHH------------
T ss_pred CCCCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--H-HHHHHh------------
Confidence 3478999999544444333 233322 25678888886421 1 111110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcC---ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN---IHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~---vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
..++.++.+|++++ +++++++++ +|+|||+|+.... .+.++..+++|+.|+.++++++..
T Consensus 51 ----~~~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 120 (244)
T 1cyd_A 51 ----CPGIEPVCVDLGDW------DATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVAR 120 (244)
T ss_dssp ----STTCEEEECCTTCH------HHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ----ccCCCcEEecCCCH------HHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 12456779999987 788888764 7999999996532 234567889999999999988754
Q ss_pred c---cC-CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 322 M---KQ-LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 322 ~---~~-~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
. .+ ..++|++||..++.... ....|+.||+..|.+++.
T Consensus 121 ~~~~~~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~ 162 (244)
T 1cyd_A 121 DMINRGVPGSIVNVSSMVAHVTFP--------------------------------------NLITYSSTKGAMTMLTKA 162 (244)
T ss_dssp HHHHHTCCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCeEEEEEcchhhcCCCC--------------------------------------CcchhHHHHHHHHHHHHH
Confidence 3 13 57999999987654311 016799999999999887
Q ss_pred c-----CCCCcEEEecCCeEEecc
Q psy16243 398 G-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G~~ 416 (782)
+ ..++++.++||+.++++.
T Consensus 163 ~a~~~~~~gi~v~~v~pg~v~t~~ 186 (244)
T 1cyd_A 163 MAMELGPHKIRVNSVNPTVVLTDM 186 (244)
T ss_dssp HHHHHGGGTEEEEEEEECCBTTHH
T ss_pred HHHHhhhcCeEEEEEecCcccCcc
Confidence 5 248999999999998753
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=3.6e-12 Score=131.55 Aligned_cols=166 Identities=18% Similarity=0.155 Sum_probs=111.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++.+
T Consensus 5 ~~~~~vlVtGasggiG~~l----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~---------- 53 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAI----AEKLAS---------------AGSTVIITGTSGER--AKAVAEEIAN---------- 53 (248)
T ss_dssp CTTCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESSHHH--HHHHHHHHHH----------
T ss_pred cCCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEeCChHH--HHHHHHHHHh----------
Confidence 3478999999544444333 233322 25678888886321 1111111110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
....++.++.+|++++ ++++++++ ++|+|||+||.... .+.++..+++|+.|+.++++
T Consensus 54 --~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 125 (248)
T 2pnf_A 54 --KYGVKAHGVEMNLLSE------ESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQ 125 (248)
T ss_dssp --HHCCCEEEEECCTTCH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred --hcCCceEEEEccCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHH
Confidence 0113688899999987 77777776 78999999997542 23456789999999977766
Q ss_pred HH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+ ++. +..++|++||...+.... ....|+.||...|.
T Consensus 126 ~~~~~~~~~-~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~ 166 (248)
T 2pnf_A 126 NSLRKMIKQ-RWGRIVNISSVVGFTGNV--------------------------------------GQVNYSTTKAGLIG 166 (248)
T ss_dssp HHCHHHHHH-TCEEEEEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCcEEEEEccHHhcCCCC--------------------------------------CCchHHHHHHHHHH
Confidence 54 333 578999999985432110 01679999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..++++.++|||.+.++
T Consensus 167 ~~~~la~e~~~~~i~v~~v~Pg~v~t~ 193 (248)
T 2pnf_A 167 FTKSLAKELAPRNVLVNAVAPGFIETD 193 (248)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCG
T ss_pred HHHHHHHHhcccCeEEEEEEeceecCc
Confidence 88765 24899999999998875
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.36 E-value=3.6e-12 Score=133.57 Aligned_cols=167 Identities=21% Similarity=0.215 Sum_probs=114.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..++.|..+ .+.|.. .+.+|+++.|... ....+..+++..
T Consensus 19 ~~~k~vlItGasggiG~~l----a~~l~~---------------~G~~v~~~~r~~~-~~~~~~~~~l~~---------- 68 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGI----AIELGR---------------RGASVVVNYGSSS-KAAEEVVAELKK---------- 68 (274)
T ss_dssp TTTCEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEEESSCH-HHHHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEcCCch-HHHHHHHHHHHh----------
Confidence 4578999999544444333 233322 2567888888322 111111222111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++++++ ++|+|||+|+.... .+.++..+++|+.|+.++++
T Consensus 69 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 139 (274)
T 1ja9_A 69 ---LGAQGVAIQADISKP------SEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQ 139 (274)
T ss_dssp ---TTCCEEEEECCTTSH------HHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---cCCcEEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 123688899999987 77777776 78999999997532 13456788999999999999
Q ss_pred HHHHc--cCCceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM--KQLKSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~--~~~~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... ++ .++|++||..++ .... ....|+.||+..|.+
T Consensus 140 ~~~~~~~~~-~~iv~~sS~~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~ 180 (274)
T 1ja9_A 140 QGLKHCRRG-GRIILTSSIAAVMTGIP--------------------------------------NHALYAGSKAAVEGF 180 (274)
T ss_dssp HHHHHEEEE-EEEEEECCGGGTCCSCC--------------------------------------SCHHHHHHHHHHHHH
T ss_pred HHHHHHhhC-CEEEEEcChHhccCCCC--------------------------------------CCchHHHHHHHHHHH
Confidence 98764 12 699999998765 2210 016799999999999
Q ss_pred HHHc-----CCCCcEEEecCCeEEecc
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
++.+ ..++.+.++|||.+.++.
T Consensus 181 ~~~~~~e~~~~gi~v~~v~Pg~v~t~~ 207 (274)
T 1ja9_A 181 CRAFAVDCGAKGVTVNCIAPGGVKTDM 207 (274)
T ss_dssp HHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred HHHHHHHhhhcCeEEEEEeeCcccccc
Confidence 8775 248999999999998753
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=5.6e-12 Score=131.46 Aligned_cols=174 Identities=17% Similarity=0.192 Sum_probs=112.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++..... ..
T Consensus 5 ~~~k~vlITGasggiG~~l----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~~~~----~~- 58 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAV----SVRLAG---------------EGATVAACDLDRAA--AQETVRLLGGPGS----KE- 58 (264)
T ss_dssp CTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESSHHH--HHHHHHTC------------
T ss_pred cCCCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEeCChHH--HHHHHHHHHhcCc----cc-
Confidence 3478999999544444333 233322 25678888886431 1111111110000 00
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcCc--------eEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNI--------HVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~v--------diViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
.....++.++.+|++++ ++++++++.+ |+|||+|+.... .+.++..+++|+.|+.+++
T Consensus 59 -~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 131 (264)
T 2pd6_A 59 -GPPRGNHAAFQADVSEA------RAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 131 (264)
T ss_dssp ------CCEEEECCTTSH------HHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred -cccCcceEEEEecCCCH------HHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHH
Confidence 00114788999999987 7777776653 999999997542 2456678999999999999
Q ss_pred HHHHHc---cC-CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMAKEM---KQ-LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a~~~---~~-~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+++... .+ ..++|++||.+...... ....|+.||...|
T Consensus 132 ~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~ 173 (264)
T 2pd6_A 132 QAAAQALVSNGCRGSIINISSIVGKVGNV--------------------------------------GQTNYAASKAGVI 173 (264)
T ss_dssp HHHHHHHHHHTCCEEEEEECCTHHHHCCT--------------------------------------TBHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEECChhhccCCC--------------------------------------CChhhHHHHHHHH
Confidence 987653 12 56899999986442210 0168999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+.+.. ..|+++.++|||.++++.
T Consensus 174 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 202 (264)
T 2pd6_A 174 GLTQTAARELGRHGIRCNSVLPGFIATPM 202 (264)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCSCC
T ss_pred HHHHHHHHHhhhcCeEEEEEeeecccccc
Confidence 888765 258999999999998864
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.34 E-value=4e-12 Score=127.40 Aligned_cols=111 Identities=15% Similarity=0.174 Sum_probs=89.6
Q ss_pred eEEecCCCCCCCCCCHHhHHHHhc---CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHccCCceEE
Q psy16243 260 VAVTGDCLKPGVGINSEDRQTLVD---NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEMKQLKSFV 329 (782)
Q Consensus 260 ~~i~gDi~~~~lGl~~~~~~~l~~---~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV 329 (782)
.++.+|++++ ++++++++ ++|+|||+||.... .+..+..+++|+.|+.++++++++. +..+||
T Consensus 45 ~~~~~D~~~~------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv 117 (207)
T 2yut_A 45 RALPADLADE------LEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAV 117 (207)
T ss_dssp EECCCCTTSH------HHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEE
T ss_pred cEEEeeCCCH------HHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEE
Confidence 7788999987 88888887 89999999997532 1346678999999999999999554 578999
Q ss_pred EEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCCCcE
Q psy16243 330 HVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGMPV 404 (782)
Q Consensus 330 ~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~ 404 (782)
++||..++.... ..+.|+.||...|.+++.+ ..|+++
T Consensus 118 ~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v 159 (207)
T 2yut_A 118 FFGAYPRYVQVP--------------------------------------GFAAYAAAKGALEAYLEAARKELLREGVHL 159 (207)
T ss_dssp EECCCHHHHSST--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred EEcChhhccCCC--------------------------------------CcchHHHHHHHHHHHHHHHHHHHhhhCCEE
Confidence 999987663210 1168999999999998776 258999
Q ss_pred EEecCCeEEec
Q psy16243 405 AMVRPSIVIAT 415 (782)
Q Consensus 405 ~IvRp~~v~G~ 415 (782)
+++|||.++++
T Consensus 160 ~~v~pg~v~t~ 170 (207)
T 2yut_A 160 VLVRLPAVATG 170 (207)
T ss_dssp EEECCCCBCSG
T ss_pred EEEecCcccCC
Confidence 99999998864
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.34 E-value=1e-11 Score=129.45 Aligned_cols=175 Identities=17% Similarity=0.172 Sum_probs=114.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+.++++..
T Consensus 12 ~~~k~vlITGasggiG~~~----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~---------- 60 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAF----TRAVAA---------------AGANVAVIYRSAAD--AVEVTEKVGK---------- 60 (265)
T ss_dssp CTTEEEEEETTTSHHHHHH----HHHHHH---------------TTEEEEEEESSCTT--HHHHHHHHHH----------
T ss_pred cCCCEEEEECCCchHHHHH----HHHHHH---------------CCCeEEEEeCcchh--hHHHHHHHHH----------
Confidence 4578999999544444333 233322 25678888885332 1122222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
....++.++.+|++++ ++++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++++
T Consensus 61 --~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 132 (265)
T 1h5q_A 61 --EFGVKTKAYQCDVSNT------DIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCR 132 (265)
T ss_dssp --HHTCCEEEEECCTTCH------HHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred --hcCCeeEEEEeeCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHH
Confidence 0123688999999987 67766655 38999999997532 13456788999999999999
Q ss_pred HHHHc----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKEM----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
++... +...++|++||..++.....- .. + ......|+.||...|.
T Consensus 133 ~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-~~---------------------------~---~~~~~~Y~~sK~a~~~ 181 (265)
T 1h5q_A 133 AVAKLWLQKQQKGSIVVTSSMSSQIINQSS-LN---------------------------G---SLTQVFYNSSKAACSN 181 (265)
T ss_dssp HHHHHHHHHTCCEEEEEECCGGGTSCCEEE-TT---------------------------E---ECSCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCceEEEeCCchhhcccccc-cc---------------------------c---cccccccHHHHHHHHH
Confidence 87542 234789999998764321100 00 0 0011689999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+++.+ ..|+++.++|||.+.++.
T Consensus 182 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 209 (265)
T 1h5q_A 182 LVKGLAAEWASAGIRVNALSPGYVNTDQ 209 (265)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred HHHHHHHHHHhcCcEEEEEecCcccccc
Confidence 98776 248999999999998753
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.33 E-value=3.3e-12 Score=133.17 Aligned_cols=163 Identities=15% Similarity=0.156 Sum_probs=113.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|++..|... ...+...++
T Consensus 6 l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~------------ 52 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAF----AEAYVR---------------EGATVAIADIDIE--RARQAAAEI------------ 52 (259)
T ss_dssp TTTCEEEEETCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHH------------
T ss_pred CCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHh------------
Confidence 4578999999544433332 233322 2567888877532 122222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 53 ----~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 122 (259)
T 4e6p_A 53 ----GPAAYAVQMDVTRQ------DSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQ 122 (259)
T ss_dssp ----CTTEEEEECCTTCH------HHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----CCCceEEEeeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 13678899999998 77777776 78999999997532 24556788999999999999
Q ss_pred HHHHc----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKEM----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
++... +.-.++|++||...+.... ....|+.||...|.
T Consensus 123 ~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~ 164 (259)
T 4e6p_A 123 AAARQMIAQGRGGKIINMASQAGRRGEA--------------------------------------LVAIYCATKAAVIS 164 (259)
T ss_dssp HHHHHHHHHTSCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEECChhhccCCC--------------------------------------CChHHHHHHHHHHH
Confidence 87532 1246899999987643210 11679999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+++.+++||.|.++
T Consensus 165 ~~~~la~e~~~~gi~vn~v~PG~v~t~ 191 (259)
T 4e6p_A 165 LTQSAGLDLIKHRINVNAIAPGVVDGE 191 (259)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCST
T ss_pred HHHHHHHHhhhcCCEEEEEEECCCccc
Confidence 98776 34899999999999875
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.2e-11 Score=130.21 Aligned_cols=246 Identities=14% Similarity=0.092 Sum_probs=141.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++...
T Consensus 4 ~~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~~~~--------- 53 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRAT----AVLFAR---------------EGAKVTITGRHAE--RLEETRQQILAA--------- 53 (278)
T ss_dssp TTTCEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHHHT---------
T ss_pred CCCCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHhc---------
Confidence 3478999999544444332 233322 2567888888632 122222222100
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC-----------chhhHHHHHHhhHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR-----------FDAHLKVAVSINLRATK 313 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~-----------f~~~~~~~~~~Nv~gt~ 313 (782)
.....++.++.+|++++ ++++++++ ++|++||+|+... ..+.++..+++|+.|+.
T Consensus 54 -~~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 126 (278)
T 1spx_A 54 -GVSEQNVNSVVADVTTD------AGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 126 (278)
T ss_dssp -TCCGGGEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHH
T ss_pred -ccCCCceeEEecccCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHH
Confidence 01124688999999987 77777776 7899999999753 12345578899999999
Q ss_pred HHHHHHHHc---cCCceEEEEeccee-ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHH
Q psy16243 314 ALLEMAKEM---KQLKSFVHVSTAYS-NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQ 389 (782)
Q Consensus 314 ~Lle~a~~~---~~~~~fV~vST~~v-~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~ 389 (782)
++++.+... .+ .++|++||... +.... ....|+.||.
T Consensus 127 ~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~--------------------------------------~~~~Y~~sK~ 167 (278)
T 1spx_A 127 ALTKKAVPHLSSTK-GEIVNISSIASGLHATP--------------------------------------DFPYYSIAKA 167 (278)
T ss_dssp HHHHHHHHHHHHHT-CEEEEECCTTSSSSCCT--------------------------------------TSHHHHHHHH
T ss_pred HHHHHHHHHHhhcC-CeEEEEecccccccCCC--------------------------------------CccHHHHHHH
Confidence 999987643 13 79999999865 32210 0157999999
Q ss_pred HHHHHHHHc-----CCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceee
Q psy16243 390 VAEDMVRRG-----GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRS 464 (782)
Q Consensus 390 ~aE~ll~~~-----~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~ 464 (782)
..|.+.+.. ..|+++.++|||.+.++...... .+ .............+...
T Consensus 168 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~-------------~~~~~~~~~~~~~~~~~---- 223 (278)
T 1spx_A 168 AIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMG-------MP-------------EETSKKFYSTMATMKEC---- 223 (278)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC----------------------------------HHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccc-------cC-------------chhhhhhhHHHHHHHhc----
Confidence 999988765 35899999999999875322100 00 00000000001111100
Q ss_pred eccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHh
Q psy16243 465 MHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEK 544 (782)
Q Consensus 465 ~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~ 544 (782)
.+ ...+++++|+|++++.++...... -..+.++++.++ ..+++.++.+.+.+
T Consensus 224 ~p-----~~~~~~~~dvA~~v~~l~s~~~~~---------------------~~tG~~~~vdgG--~~~~~~~~~~~~~~ 275 (278)
T 1spx_A 224 VP-----AGVMGQPQDIAEVIAFLADRKTSS---------------------YIIGHQLVVDGG--SSLIMGLHCQDFAK 275 (278)
T ss_dssp CT-----TSSCBCHHHHHHHHHHHHCHHHHT---------------------TCCSCEEEESTT--GGGC----------
T ss_pred CC-----CcCCCCHHHHHHHHHHHcCccccC---------------------cccCcEEEECCC--cccccCcccccHHH
Confidence 01 124678999999998877543110 024789999988 77899999887765
Q ss_pred c
Q psy16243 545 A 545 (782)
Q Consensus 545 ~ 545 (782)
.
T Consensus 276 ~ 276 (278)
T 1spx_A 276 L 276 (278)
T ss_dssp -
T ss_pred H
Confidence 4
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.4e-11 Score=128.61 Aligned_cols=166 Identities=16% Similarity=0.193 Sum_probs=107.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+...++..
T Consensus 12 l~~k~vlITGasggiG~~l----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~~~---------- 60 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAI----VEEFAG---------------FGAVIHTCARNEY--ELNECLSKWQK---------- 60 (266)
T ss_dssp CTTCEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHHH----------
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHh----------
Confidence 4578999999544444333 233322 2567888888632 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh--------cCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV--------DNIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~--------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ +++++++ ..+|+|||+||.... .+.++..+++|+.|+.+++
T Consensus 61 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~ 131 (266)
T 1xq1_A 61 ---KGFQVTGSVCDASLR------PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLS 131 (266)
T ss_dssp ---TTCCEEEEECCTTSH------HHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---cCCeeEEEECCCCCH------HHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence 113688899999987 6777666 468999999997532 2345678899999999999
Q ss_pred HHHH----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMAK----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+++. +. +..++|++||..++.... ....|+.||...|
T Consensus 132 ~~~~~~~~~~-~~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~ 172 (266)
T 1xq1_A 132 QLAHPLLKAS-GCGNIIFMSSIAGVVSAS--------------------------------------VGSIYSATKGALN 172 (266)
T ss_dssp HHHHHHHHHH-SSCEEEEEC------------------------------------------------CCHHHHHHHHHH
T ss_pred HHHHHHHHhc-CCcEEEEEccchhccCCC--------------------------------------CCchHHHHHHHHH
Confidence 9873 33 578999999987653210 0168999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+++.+ ..|+++.++|||.++++.
T Consensus 173 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 201 (266)
T 1xq1_A 173 QLARNLACEWASDGIRANAVAPAVIATPL 201 (266)
T ss_dssp HHHHHHHHHHGGGTCEEEEEECCSCC---
T ss_pred HHHHHHHHHHhHhCcEEEEEeeCCCccch
Confidence 998775 248999999999999864
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.5e-11 Score=126.70 Aligned_cols=162 Identities=19% Similarity=0.182 Sum_probs=111.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ++++..+.
T Consensus 5 l~~k~vlITGasggiG~~~----a~~l~~---------------~G~~V~~~~r~~~------~~~~~~~~--------- 50 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGT----VQALHA---------------TGARVVAVSRTQA------DLDSLVRE--------- 50 (244)
T ss_dssp CTTCEEEEESTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH------HHHHHHHH---------
T ss_pred cCCcEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHH------HHHHHHHH---------
Confidence 3478999999544444333 233322 2567888888632 11111110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc---CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD---NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~---~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
..++.++.+|++++ ++++++++ .+|+|||+|+.... .+.++..+++|+.|+.++++++..
T Consensus 51 ----~~~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 120 (244)
T 3d3w_A 51 ----CPGIEPVCVDLGDW------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVAR 120 (244)
T ss_dssp ----STTCEEEECCTTCH------HHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ----cCCCCEEEEeCCCH------HHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 01456678999987 78888876 47999999997532 134567899999999999988754
Q ss_pred c---cC-CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 322 M---KQ-LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 322 ~---~~-~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
. .+ ..++|++||..++.... ....|+.||+..|.+++.
T Consensus 121 ~~~~~~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~ 162 (244)
T 3d3w_A 121 GLIARGVPGAIVNVSSQCSQRAVT--------------------------------------NHSVYCSTKGALDMLTKV 162 (244)
T ss_dssp HHHHHTCCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCcEEEEeCchhhccCCC--------------------------------------CCchHHHHHHHHHHHHHH
Confidence 3 13 67999999987653210 016899999999999877
Q ss_pred c-----CCCCcEEEecCCeEEec
Q psy16243 398 G-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G~ 415 (782)
+ ..++++.++|||.++++
T Consensus 163 la~e~~~~~i~v~~v~Pg~v~t~ 185 (244)
T 3d3w_A 163 MALELGPHKIRVNAVNPTVVMTS 185 (244)
T ss_dssp HHHHHGGGTEEEEEEEECCBTTT
T ss_pred HHHHhcccCeEEEEEEecccccc
Confidence 5 24899999999999875
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.4e-11 Score=127.74 Aligned_cols=168 Identities=20% Similarity=0.210 Sum_probs=112.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecc-cchhhHHHHHHHhhcccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINL-RATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~-~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
+.+|+++|||..++.|..+ .+.|.. .+.+|+++.|. ... ..+..+++..
T Consensus 5 l~~k~vlVTGasggiG~~~----a~~l~~---------------~G~~V~~~~r~~~~~--~~~~~~~~~~--------- 54 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLAT----ARLFAR---------------AGAKVGLHGRKAPAN--IDETIASMRA--------- 54 (258)
T ss_dssp GTTCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESSCCTT--HHHHHHHHHH---------
T ss_pred CCCCEEEEeCCCChHHHHH----HHHHHH---------------CCCEEEEECCCchhh--HHHHHHHHHh---------
Confidence 4578999999544444333 233322 25678888886 321 2222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcc-cC---c----hhhHHHHHHhhHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAAT-VR---F----DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~-v~---f----~~~~~~~~~~Nv~gt~~L 315 (782)
...++.++.+|++++ ++++++++ ++|+|||+||. .. + .+.++..+++|+.|+.++
T Consensus 55 ----~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 124 (258)
T 3afn_B 55 ----DGGDAAFFAADLATS------EACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMT 124 (258)
T ss_dssp ----TTCEEEEEECCTTSH------HHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred ----cCCceEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHH
Confidence 113688999999987 77877776 78999999996 22 1 133567889999999999
Q ss_pred HHHHHHc--------cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHH
Q psy16243 316 LEMAKEM--------KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALT 387 (782)
Q Consensus 316 le~a~~~--------~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~S 387 (782)
++++... +...++|++||.+.+.... + ....|+.|
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------~-----------------------------~~~~Y~~s 167 (258)
T 3afn_B 125 TKFALPHLAAAAKASGQTSAVISTGSIAGHTGGG--------P-----------------------------GAGLYGAA 167 (258)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCC--------T-----------------------------TCHHHHHH
T ss_pred HHHHHHHHHhcccCCCCCcEEEEecchhhccCCC--------C-----------------------------CchHHHHH
Confidence 8876421 1127899999987653100 0 11689999
Q ss_pred HHHHHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 388 KQVAEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 388 K~~aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
|+..|.+++.+ ..|+++.++|||.+.++.
T Consensus 168 K~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~ 201 (258)
T 3afn_B 168 KAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAF 201 (258)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGG
T ss_pred HHHHHHHHHHHHHhhcccCeEEEEEeCCCccccc
Confidence 99999998765 248999999999998753
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.8e-11 Score=126.99 Aligned_cols=163 Identities=18% Similarity=0.153 Sum_probs=99.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 7 ~~~k~vlITGas~giG~~~----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~---------- 55 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAY----AEALAR---------------EGAAVVVADINAEA--AEAVAKQIVA---------- 55 (253)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH----------
T ss_pred cCCCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEcCCHHH--HHHHHHHHHh----------
Confidence 4589999999644444333 233322 25678888885331 2222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----------chhhHHHHHHhhHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----------FDAHLKVAVSINLRATKA 314 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----------f~~~~~~~~~~Nv~gt~~ 314 (782)
...++.++.+|++++ ++++++++ .+|++||+||... -.+.++..+++|+.|+.+
T Consensus 56 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 126 (253)
T 3qiv_A 56 ---DGGTAISVAVDVSDP------ESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALW 126 (253)
T ss_dssp ---TTCEEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHH
T ss_pred ---cCCcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHH
Confidence 124788999999998 77777766 6899999999731 124456789999999666
Q ss_pred HHHHH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 315 LLEMA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 315 Lle~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
+.+.+ ++. +..++|++||...+.. ...|+.||..
T Consensus 127 ~~~~~~~~~~~~-~~g~iv~isS~~~~~~-----------------------------------------~~~Y~asK~a 164 (253)
T 3qiv_A 127 CTRAVYKKMTKR-GGGAIVNQSSTAAWLY-----------------------------------------SNYYGLAKVG 164 (253)
T ss_dssp HHHHHHHHHHHH-TCEEEEEECC----------------------------------------------------CCHHH
T ss_pred HHHHHHHHHHhc-CCCEEEEECCccccCC-----------------------------------------CchhHHHHHH
Confidence 66554 443 5678999999876521 1579999999
Q ss_pred HHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 391 AEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 391 aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.|.+.+.+ ..|+++.+++||.|.++.
T Consensus 165 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 195 (253)
T 3qiv_A 165 INGLTQQLSRELGGRNIRINAIAPGPIDTEA 195 (253)
T ss_dssp HHHHHHHHHHHTTTTTEEEEEEEC-------
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEecCCcccc
Confidence 99888765 348999999999998764
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.31 E-value=8.5e-12 Score=131.71 Aligned_cols=243 Identities=17% Similarity=0.209 Sum_probs=152.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|.... ..+..+++...
T Consensus 9 l~~k~vlVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~~--------- 58 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGV----AAGLVA---------------AGASVMIVGRNPDK--LAGAVQELEAL--------- 58 (281)
T ss_dssp CTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHTT---------
T ss_pred cCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHHh---------
Confidence 4589999999544443332 233322 25678888876431 22222222111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----c----hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----F----DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~Ll 316 (782)
+....++.++.+|++++ ++++++++ .+|++||+||... + .+.++..+++|+.|+.+++
T Consensus 59 -~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~ 131 (281)
T 3svt_A 59 -GANGGAIRYEPTDITNE------DETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVL 131 (281)
T ss_dssp -CCSSCEEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCceEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence 11123788999999997 77777665 5699999999621 1 1345678899999999999
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+... .+-.++|++||...+.... ....|+.||...|.
T Consensus 132 ~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~ 173 (281)
T 3svt_A 132 KHAAREMVRGGGGSFVGISSIAASNTHR--------------------------------------WFGAYGVTKSAVDH 173 (281)
T ss_dssp HHHHHHHHHTTCEEEEEECCHHHHSCCT--------------------------------------TCTHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEEEeCHHHcCCCC--------------------------------------CChhHHHHHHHHHH
Confidence 986543 2335899999987653211 11689999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccC
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHAD 468 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~ 468 (782)
+.+.+ ..++.+.+++||.|.++.... +.. ..........+
T Consensus 174 l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-----------------------~~~----~~~~~~~~~~~-------- 218 (281)
T 3svt_A 174 LMQLAADELGASWVRVNSIRPGLIRTDLVAA-----------------------ITE----SAELSSDYAMC-------- 218 (281)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCSGGGHH-----------------------HHT----CHHHHHHHHHH--------
T ss_pred HHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-----------------------ccc----CHHHHHHHHhc--------
Confidence 98765 347999999999988653211 000 00111111111
Q ss_pred CCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCccc-HHHHHHHHHhccc
Q psy16243 469 PELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIK-WKEFMALNEKAVP 547 (782)
Q Consensus 469 ~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t-~~el~~~i~~~~~ 547 (782)
.....+..++|+|++++.++..... ...++++++.++ ..++ ..++...+.+.++
T Consensus 219 -~p~~r~~~~~dva~~~~~l~s~~~~----------------------~itG~~~~vdgG--~~~~~~~~~~~~~~~~~~ 273 (281)
T 3svt_A 219 -TPLPRQGEVEDVANMAMFLLSDAAS----------------------FVTGQVINVDGG--QMLRRGPDFSAMLEPVFG 273 (281)
T ss_dssp -CSSSSCBCHHHHHHHHHHHHSGGGT----------------------TCCSCEEEESTT--GGGSCCCCCHHHHHHHHC
T ss_pred -CCCCCCCCHHHHHHHHHHHhCcccC----------------------CCCCCEEEeCCC--hhcccCCcchhccccccC
Confidence 1112455689999998887754321 135789999888 4454 5666666666665
Q ss_pred cc
Q psy16243 548 EI 549 (782)
Q Consensus 548 ~~ 549 (782)
..
T Consensus 274 ~~ 275 (281)
T 3svt_A 274 RD 275 (281)
T ss_dssp TT
T ss_pred Cc
Confidence 44
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.5e-11 Score=126.95 Aligned_cols=114 Identities=17% Similarity=0.260 Sum_probs=79.8
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ ++++++++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 55 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 128 (247)
T 2hq1_A 55 INVVVAKGDVKNP------EDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKI 128 (247)
T ss_dssp CCEEEEESCTTSH------HHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3688999999987 77777665 68999999997532 1234568899999998888876532
Q ss_pred ---cCCceEEEEeccee-ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 323 ---KQLKSFVHVSTAYS-NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 323 ---~~~~~fV~vST~~v-~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
.+..++|++||... ++.+ ....|+.||...|.+++.+
T Consensus 129 ~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 169 (247)
T 2hq1_A 129 MLKQKSGKIINITSIAGIIGNA---------------------------------------GQANYAASKAGLIGFTKSI 169 (247)
T ss_dssp HHHHTCEEEEEECC------------------------------------------------CHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEcChhhccCCC---------------------------------------CCcHhHHHHHHHHHHHHHH
Confidence 25689999999753 3321 0167999999999988776
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..++++.+++||.+.++
T Consensus 170 a~e~~~~gi~v~~v~Pg~v~t~ 191 (247)
T 2hq1_A 170 AKEFAAKGIYCNAVAPGIIKTD 191 (247)
T ss_dssp HHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHcCcEEEEEEEEEEecc
Confidence 24889999999888754
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=2.4e-11 Score=125.88 Aligned_cols=165 Identities=16% Similarity=0.190 Sum_probs=111.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++
T Consensus 9 ~~~k~vlITGasggiG~~l----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~------------ 55 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEI----CRAFAA---------------SGARLILIDREAAA--LDRAAQEL------------ 55 (254)
T ss_dssp CTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHH------------
T ss_pred CCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHh------------
Confidence 4578999999544443332 233322 25678888886321 11111111
Q ss_pred Ccccccce-eEEecCCCCCCCCCCHHhHHHHh------cCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKM-VAVTGDCLKPGVGINSEDRQTLV------DNIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv-~~i~gDi~~~~lGl~~~~~~~l~------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++ .++.+|++++ +++++++ ..+|+|||+||.... .+.++..+++|+.|+.++++
T Consensus 56 ----~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 125 (254)
T 2wsb_A 56 ----GAAVAARIVADVTDA------EAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASR 125 (254)
T ss_dssp ----GGGEEEEEECCTTCH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----cccceeEEEEecCCH------HHHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 1245 7899999987 6777665 468999999997543 13456788999999777777
Q ss_pred HH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+ ++. +..++|++||..++.... . .+.+.|+.||+..|.
T Consensus 126 ~~~~~~~~~-~~~~iv~isS~~~~~~~~---------------------------------~---~~~~~Y~~sK~a~~~ 168 (254)
T 2wsb_A 126 AFGRAMVAR-GAGAIVNLGSMSGTIVNR---------------------------------P---QFASSYMASKGAVHQ 168 (254)
T ss_dssp HHHHHHHHH-TCEEEEEECCGGGTSCCS---------------------------------S---SCBHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCcEEEEEecchhccCCC---------------------------------C---CcchHHHHHHHHHHH
Confidence 64 333 578999999987653211 0 011689999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+++.. ..|+++.++|||.++++.
T Consensus 169 ~~~~~~~~~~~~gi~v~~v~Pg~v~t~~ 196 (254)
T 2wsb_A 169 LTRALAAEWAGRGVRVNALAPGYVATEM 196 (254)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred HHHHHHHHHhhcCeEEEEEEecccCchh
Confidence 98765 248999999999998753
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.30 E-value=5.3e-12 Score=126.16 Aligned_cols=111 Identities=13% Similarity=0.203 Sum_probs=84.5
Q ss_pred EEecCCCCCCCCCCHHhHHHHhcC---ceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc-cCCceEE
Q psy16243 261 AVTGDCLKPGVGINSEDRQTLVDN---IHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM-KQLKSFV 329 (782)
Q Consensus 261 ~i~gDi~~~~lGl~~~~~~~l~~~---vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~-~~~~~fV 329 (782)
.+.+|++++ +++++++++ +|+|||+||..... +.+...+++|+.|+.++++++... .+-.++|
T Consensus 38 ~~~~D~~~~------~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv 111 (202)
T 3d7l_A 38 DVTVDITNI------DSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFT 111 (202)
T ss_dssp SEECCTTCH------HHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEE
T ss_pred ceeeecCCH------HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEE
Confidence 367899887 777777765 79999999964321 344567899999999999998764 1126899
Q ss_pred EEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC----CCCcEE
Q psy16243 330 HVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG----AGMPVA 405 (782)
Q Consensus 330 ~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~----~glp~~ 405 (782)
++||.+++.... ....|+.||...|.+++.+. .++++.
T Consensus 112 ~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~ 153 (202)
T 3d7l_A 112 LTTGIMMEDPIV--------------------------------------QGASAAMANGAVTAFAKSAAIEMPRGIRIN 153 (202)
T ss_dssp EECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHTTSCSTTCEEE
T ss_pred EEcchhhcCCCC--------------------------------------ccHHHHHHHHHHHHHHHHHHHHccCCeEEE
Confidence 999986543210 11689999999999998873 389999
Q ss_pred EecCCeEEec
Q psy16243 406 MVRPSIVIAT 415 (782)
Q Consensus 406 IvRp~~v~G~ 415 (782)
++||+.++++
T Consensus 154 ~v~pg~v~~~ 163 (202)
T 3d7l_A 154 TVSPNVLEES 163 (202)
T ss_dssp EEEECCBGGG
T ss_pred EEecCccCCc
Confidence 9999998874
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.30 E-value=1.5e-11 Score=126.50 Aligned_cols=115 Identities=17% Similarity=0.250 Sum_probs=88.8
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ ++++++++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 51 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 124 (244)
T 1edo_A 51 GQAITFGGDVSKE------ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKI 124 (244)
T ss_dssp CEEEEEECCTTSH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3688899999987 77777776 68999999997542 1445678999999999999987653
Q ss_pred ---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 ---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 ---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+..++|++||...+.... ....|+.||...|.+.+..
T Consensus 125 ~~~~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la 166 (244)
T 1edo_A 125 MMKKRKGRIINIASVVGLIGNI--------------------------------------GQANYAAAKAGVIGFSKTAA 166 (244)
T ss_dssp HHHHTCEEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEECChhhcCCCC--------------------------------------CCccchhhHHHHHHHHHHHH
Confidence 2568999999986542110 0167999999988887765
Q ss_pred ----CCCCcEEEecCCeEEec
Q psy16243 399 ----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G~ 415 (782)
..++++.++|||.+.++
T Consensus 167 ~e~~~~gi~v~~v~Pg~v~t~ 187 (244)
T 1edo_A 167 REGASRNINVNVVCPGFIASD 187 (244)
T ss_dssp HHHHTTTEEEEEEEECSBCSH
T ss_pred HHhhhcCCEEEEEeeCccccc
Confidence 35899999999999875
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=4.1e-11 Score=125.02 Aligned_cols=162 Identities=20% Similarity=0.218 Sum_probs=111.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++
T Consensus 5 l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~------------ 51 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASH----VRAMVA---------------EGAKVVFGDILDE--EGKAMAAEL------------ 51 (260)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHT------------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHh------------
Confidence 4578999999544443332 233322 2567888888632 111111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 52 ----~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 121 (260)
T 1nff_A 52 ----ADAARYVHLDVTQP------AQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR 121 (260)
T ss_dssp ----GGGEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----hcCceEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence 12478899999987 77777776 78999999997532 23456789999999976665
Q ss_pred HH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+ ++. +..++|++||..++.... ....|+.||...|.
T Consensus 122 ~~~~~~~~~-~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~ 162 (260)
T 1nff_A 122 AVVKPMKEA-GRGSIINISSIEGLAGTV--------------------------------------ACHGYTATKFAVRG 162 (260)
T ss_dssp HHHHHHHHH-TCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCCEEEEEeehhhcCCCC--------------------------------------CchhHHHHHHHHHH
Confidence 53 443 568999999987653210 01579999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+++.++|||.+.++
T Consensus 163 ~~~~la~e~~~~gi~v~~v~Pg~v~t~ 189 (260)
T 1nff_A 163 LTKSTALELGPSGIRVNSIHPGLVKTP 189 (260)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCSG
T ss_pred HHHHHHHHhCccCcEEEEEEeCCCCCC
Confidence 88765 25899999999999875
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.7e-11 Score=128.04 Aligned_cols=168 Identities=15% Similarity=0.198 Sum_probs=114.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 5 l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~---------- 53 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAI----AEGFAK---------------EGAHIVLVARQVDR--LHEAARSLKE---------- 53 (263)
T ss_dssp CTTCEEEEESCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH----------
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEcCCHHH--HHHHHHHHHH----------
Confidence 3478999999544444332 233322 25678888886321 1221122110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
....++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 54 --~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 125 (263)
T 3ai3_A 54 --KFGVRVLEVAVDVATP------EGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLAR 125 (263)
T ss_dssp --HHCCCEEEEECCTTSH------HHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred --hcCCceEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 0013688899999987 77777766 68999999997532 24456788999999999988
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+..++|++||..++.... ....|+.||...|.+
T Consensus 126 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~ 167 (263)
T 3ai3_A 126 GLVPGMRARGGGAIIHNASICAVQPLW--------------------------------------YEPIYNVTKAALMMF 167 (263)
T ss_dssp HHHHHHHHHTCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEECchhhcCCCC--------------------------------------CcchHHHHHHHHHHH
Confidence 86421 2568999999987654310 016799999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEecc
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+.. ..|+++.++|||.+.++.
T Consensus 168 ~~~la~e~~~~gi~v~~v~Pg~v~t~~ 194 (263)
T 3ai3_A 168 SKTLATEVIKDNIRVNCINPGLILTPD 194 (263)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred HHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 8765 258999999999998863
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.28 E-value=3e-11 Score=126.10 Aligned_cols=159 Identities=18% Similarity=0.209 Sum_probs=112.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.....
T Consensus 26 ~~~k~vlVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~~~--------------------- 65 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGL----VRAYRD---------------RNYRVVATSRSIKPS--------------------- 65 (260)
T ss_dssp TTCCEEEESSCSSHHHHHH----HHHHHH---------------TTCEEEEEESSCCCC---------------------
T ss_pred cCCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEeCChhhc---------------------
Confidence 4578999999544444333 233322 256788887753210
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 66 ---~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 136 (260)
T 3un1_A 66 ---ADPDIHTVAGDISKP------ETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQ 136 (260)
T ss_dssp ---SSTTEEEEESCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---ccCceEEEEccCCCH------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence 112688999999998 77777766 68999999997532 24456788999999999999
Q ss_pred HHH----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAK----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
++. +. +..++|++||..+..... ......|+.||...|.
T Consensus 137 ~~~~~m~~~-~~g~iv~isS~~~~~~~~------------------------------------~~~~~~Y~~sKaa~~~ 179 (260)
T 3un1_A 137 RAAAEMLKQ-GSGHIVSITTSLVDQPMV------------------------------------GMPSALASLTKGGLNA 179 (260)
T ss_dssp HHHHHHHHT-TCEEEEEECCTTTTSCBT------------------------------------TCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCcEEEEEechhhccCCC------------------------------------CCccHHHHHHHHHHHH
Confidence 863 33 568999999986543210 0111689999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.+.. ..|+++.+++||.|.++.
T Consensus 180 l~~~la~e~~~~gI~vn~v~PG~v~t~~ 207 (260)
T 3un1_A 180 VTRSLAMEFSRSGVRVNAVSPGVIKTPM 207 (260)
T ss_dssp HHHHHHHHTTTTTEEEEEEEECCBCCTT
T ss_pred HHHHHHHHhCcCCeEEEEEeecCCCCCC
Confidence 88765 348999999999998753
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.3e-11 Score=125.24 Aligned_cols=113 Identities=19% Similarity=0.260 Sum_probs=82.9
Q ss_pred ceeE-EecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH----H
Q psy16243 258 KMVA-VTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE----M 318 (782)
Q Consensus 258 kv~~-i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle----~ 318 (782)
++.. +.+|++++ ++++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++ .
T Consensus 52 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 125 (245)
T 2ph3_A 52 PLVAVLGANLLEA------EAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKL 125 (245)
T ss_dssp SCEEEEECCTTSH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceEEEEeccCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 4566 89999987 67766654 68999999997532 23456788999999555554 4
Q ss_pred HHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 319 AKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 319 a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
+++. +..++|++||...+.... ....|+.||...|.+.+..
T Consensus 126 ~~~~-~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~l 166 (245)
T 2ph3_A 126 MMKA-RFGRIVNITSVVGILGNP--------------------------------------GQANYVASKAGLIGFTRAV 166 (245)
T ss_dssp HHHH-TCEEEEEECCTHHHHCCS--------------------------------------SBHHHHHHHHHHHHHHHHH
T ss_pred HHhc-CCCEEEEEeChhhccCCC--------------------------------------CCcchHHHHHHHHHHHHHH
Confidence 4444 678999999985432210 0167999999988887765
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..+++++++|||.+.++
T Consensus 167 a~e~~~~gi~v~~v~Pg~v~t~ 188 (245)
T 2ph3_A 167 AKEYAQRGITVNAVAPGFIETE 188 (245)
T ss_dssp HHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHcCeEEEEEEEEeecCc
Confidence 24899999999999875
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=2.3e-11 Score=125.73 Aligned_cols=115 Identities=14% Similarity=0.274 Sum_probs=88.9
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH---
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA--- 319 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a--- 319 (782)
.++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 54 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 127 (246)
T 3osu_A 54 VDSFAIQANVADA------DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQ 127 (246)
T ss_dssp SCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4688999999997 77777766 68999999997532 2445678999999999999987
Q ss_pred -HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 320 -KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 320 -~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
++. +..++|++||...+.... ....|+.||...|.+.+..
T Consensus 128 ~~~~-~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~l 168 (246)
T 3osu_A 128 MLRQ-RSGAIINLSSVVGAVGNP--------------------------------------GQANYVATKAGVIGLTKSA 168 (246)
T ss_dssp HHHH-TCEEEEEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHc-CCCEEEEEcchhhcCCCC--------------------------------------CChHHHHHHHHHHHHHHHH
Confidence 333 567999999986542210 1167999999998887765
Q ss_pred -----CCCCcEEEecCCeEEecc
Q psy16243 399 -----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~~ 416 (782)
..|+++.+++||.|.++.
T Consensus 169 a~e~~~~gi~vn~v~PG~v~t~~ 191 (246)
T 3osu_A 169 ARELASRGITVNAVAPGFIVSDM 191 (246)
T ss_dssp HHHHGGGTEEEEEEEECSBGGGC
T ss_pred HHHhcccCeEEEEEEECCCcCCc
Confidence 348999999999988753
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.6e-11 Score=126.97 Aligned_cols=168 Identities=14% Similarity=0.207 Sum_probs=113.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|... +.+|++..|.... ...+..+++..
T Consensus 23 l~~k~~lVTGas~GIG~~i----a~~la~~---------------G~~V~~~~r~~~~-~~~~~~~~~~~---------- 72 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAI----ARTLAKA---------------GANIVLNGFGAPD-EIRTVTDEVAG---------- 72 (281)
T ss_dssp CTTCEEEEETCSSHHHHHH----HHHHHHT---------------TCEEEEECCCCHH-HHHHHHHHHHT----------
T ss_pred cCCCEEEEeCCCcHHHHHH----HHHHHHC---------------CCEEEEEeCCChH-HHHHHHHHHhh----------
Confidence 4579999999644444333 2333322 5678888774321 11222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
....++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 73 --~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 144 (281)
T 3v2h_A 73 --LSSGTVLHHPADMTKP------SEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIR 144 (281)
T ss_dssp --TCSSCEEEECCCTTCH------HHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred --ccCCcEEEEeCCCCCH------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 0124788999999998 77777765 67999999997532 23456789999999999999
Q ss_pred HHH----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAK----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
++. +. +..++|++||...+.... ....|+.||...+.
T Consensus 145 ~~~~~~~~~-~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~ 185 (281)
T 3v2h_A 145 GAIPPMKKK-GWGRIINIASAHGLVASP--------------------------------------FKSAYVAAKHGIMG 185 (281)
T ss_dssp HHHHHHHHH-TCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCCEEEEECCcccccCCC--------------------------------------CchHHHHHHHHHHH
Confidence 863 32 557899999986543210 11689999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.+.. ..|+++..++||.|.++.
T Consensus 186 l~~~la~e~~~~gI~vn~v~PG~v~t~~ 213 (281)
T 3v2h_A 186 LTKTVALEVAESGVTVNSICPGYVLTPL 213 (281)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred HHHHHHHHhhhcCcEEEEEECCCCcCcc
Confidence 88765 348999999999998754
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.6e-11 Score=126.08 Aligned_cols=115 Identities=20% Similarity=0.225 Sum_probs=88.4
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCch-----------hhHHHHHHhhHHHHHHHHHHHH
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRFD-----------AHLKVAVSINLRATKALLEMAK 320 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f~-----------~~~~~~~~~Nv~gt~~Lle~a~ 320 (782)
++.++.+|++++ ++++++++ .+|++||+|+..... +.++..+++|+.|+.++++++.
T Consensus 40 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 113 (242)
T 1uay_A 40 DLIYVEGDVTRE------EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAA 113 (242)
T ss_dssp SSEEEECCTTCH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ceEEEeCCCCCH------HHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHH
Confidence 347889999987 78887776 789999999975322 1667889999999999999876
Q ss_pred Hc-cC--------CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 321 EM-KQ--------LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 321 ~~-~~--------~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
.. .. ..++|++||.+++.... ....|+.||...
T Consensus 114 ~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~ 155 (242)
T 1uay_A 114 WAMRENPPDAEGQRGVIVNTASVAAFEGQI--------------------------------------GQAAYAASKGGV 155 (242)
T ss_dssp HHHTTCCCCTTSCSEEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCeEEEEeCChhhccCCC--------------------------------------CCchhhHHHHHH
Confidence 53 11 12899999987654311 116899999999
Q ss_pred HHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 392 EDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 392 E~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
|.+.+.. ..|+++.++|||.++++.
T Consensus 156 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 185 (242)
T 1uay_A 156 VALTLPAARELAGWGIRVVTVAPGLFDTPL 185 (242)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSCSSHH
T ss_pred HHHHHHHHHHHhhcCcEEEEEEeccCcchh
Confidence 9887765 248999999999998753
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.26 E-value=7.1e-11 Score=124.31 Aligned_cols=120 Identities=18% Similarity=0.189 Sum_probs=90.1
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHc----
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEM---- 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~---- 322 (782)
.++.++.+|++++ ++++.+++ .+|++||+|+..... +.++..+++|+.|+.++++++...
T Consensus 74 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 147 (278)
T 3sx2_A 74 SRIVARQADVRDR------ESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQ 147 (278)
T ss_dssp CCEEEEECCTTCH------HHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 4789999999998 77777766 689999999976433 456678999999999999986432
Q ss_pred cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----
Q psy16243 323 KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG---- 398 (782)
Q Consensus 323 ~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~---- 398 (782)
+.-.++|++||......... + .+. ...|+.||...+.+.+..
T Consensus 148 ~~~g~iv~isS~~~~~~~~~-------~--~~~-------------------------~~~Y~asKaa~~~~~~~la~e~ 193 (278)
T 3sx2_A 148 GTGGSIVLISSSAGLAGVGS-------A--DPG-------------------------SVGYVAAKHGVVGLMRVYANLL 193 (278)
T ss_dssp CSCEEEEEECCGGGTSCCCC-------S--SHH-------------------------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEccHHhcCCCcc-------C--CCC-------------------------chHhHHHHHHHHHHHHHHHHHH
Confidence 22468999999875432110 0 000 157999999999988765
Q ss_pred -CCCCcEEEecCCeEEecc
Q psy16243 399 -GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 399 -~~glp~~IvRp~~v~G~~ 416 (782)
..|+++..++||.|.++.
T Consensus 194 ~~~gi~vn~v~PG~v~T~~ 212 (278)
T 3sx2_A 194 AGQMIRVNSIHPSGVETPM 212 (278)
T ss_dssp GGGTEEEEEEEESCBSSTT
T ss_pred hccCcEEEEEecCCccCcc
Confidence 348999999999998753
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=9.5e-11 Score=122.20 Aligned_cols=166 Identities=18% Similarity=0.150 Sum_probs=112.4
Q ss_pred cCCCeeEeeccc--cCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 172 YLSKMVAVTGDC--LKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 172 ~~~k~vlvTG~~--~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
+.+|+++|||.. +..|.. ..+.|... +.+|+++.|.... .+.++++...
T Consensus 6 l~~k~vlVTGas~~~gIG~~----ia~~l~~~---------------G~~V~~~~r~~~~---~~~~~~l~~~------- 56 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFA----IAAKLKEA---------------GAEVALSYQAERL---RPEAEKLAEA------- 56 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHH----HHHHHHHH---------------TCEEEEEESCGGG---HHHHHHHHHH-------
T ss_pred CCCCEEEEECCCCCCcHHHH----HHHHHHHC---------------CCEEEEEcCCHHH---HHHHHHHHHh-------
Confidence 347899999953 333322 23333321 5678888886532 2223322110
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----------hhhHHHHHHhhHHH
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----------DAHLKVAVSINLRA 311 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~g 311 (782)
..++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|
T Consensus 57 ------~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g 124 (261)
T 2wyu_A 57 ------LGGALLFRADVTQD------EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYS 124 (261)
T ss_dssp ------TTCCEEEECCTTCH------HHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHH
T ss_pred ------cCCcEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHH
Confidence 11367899999987 77777665 68999999997532 23456789999999
Q ss_pred HHHHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 312 TKALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 312 t~~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
+.++++++... .+-.++|++||...+.... ....|+.||..
T Consensus 125 ~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a 166 (261)
T 2wyu_A 125 LVAVARRAEPLLREGGGIVTLTYYASEKVVP--------------------------------------KYNVMAIAKAA 166 (261)
T ss_dssp HHHHHHHHTTTEEEEEEEEEEECGGGTSBCT--------------------------------------TCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCEEEEEecccccCCCC--------------------------------------CchHHHHHHHH
Confidence 99999998753 1124899999976542210 01579999999
Q ss_pred HHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 391 AEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 391 aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.|.+.+.. ..|+++.+++||.|.++.
T Consensus 167 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 197 (261)
T 2wyu_A 167 LEASVRYLAYELGPKGVRVNAISAGPVRTVA 197 (261)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCCCCTG
T ss_pred HHHHHHHHHHHHhhhCcEEEEEeeCCCcCch
Confidence 99988765 348999999999998753
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.26 E-value=4.3e-11 Score=123.18 Aligned_cols=116 Identities=16% Similarity=0.207 Sum_probs=89.9
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 58 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 131 (244)
T 2bd0_A 58 ALTDTITADISDM------ADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL 131 (244)
T ss_dssp CEEEEEECCTTSH------HHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeeeEEEecCCCH------HHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3688999999987 77777765 68999999997542 2456678999999999999987431
Q ss_pred ---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 ---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 ---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+..++|++||..++.... ....|+.||...|.+++..
T Consensus 132 ~~~~~~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la 173 (244)
T 2bd0_A 132 MERQHSGHIFFITSVAATKAFR--------------------------------------HSSIYCMSKFGQRGLVETMR 173 (244)
T ss_dssp HHHHTCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCEEEEEecchhcCCCC--------------------------------------CCchhHHHHHHHHHHHHHHH
Confidence 2568999999987653210 1168999999999988554
Q ss_pred ----CCCCcEEEecCCeEEecc
Q psy16243 399 ----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G~~ 416 (782)
..|+++.++|||.++++.
T Consensus 174 ~e~~~~gi~v~~v~Pg~v~t~~ 195 (244)
T 2bd0_A 174 LYARKCNVRITDVQPGAVYTPM 195 (244)
T ss_dssp HHHTTTTEEEEEEEECCBCSTT
T ss_pred HHhhccCcEEEEEECCCccchh
Confidence 358999999999998753
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.26 E-value=5.5e-11 Score=123.65 Aligned_cols=160 Identities=19% Similarity=0.163 Sum_probs=109.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... .+..+++
T Consensus 4 l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~---~~~~~~~------------ 49 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAI----AQAFAR---------------EGALVALCDLRPEG---KEVAEAI------------ 49 (256)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESSTTH---HHHHHHH------------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEeCChhH---HHHHHHh------------
Confidence 3478999999544444332 233322 25678888886442 1111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
.+ .++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 50 -----~~-~~~~~D~~~~------~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 117 (256)
T 2d1y_A 50 -----GG-AFFQVDLEDE------RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSA 117 (256)
T ss_dssp -----TC-EEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred -----hC-CEEEeeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 13 6788999987 67766655 57999999997532 13456789999999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+..++|++||........ ....|+.||+..|.+
T Consensus 118 ~~~~~m~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~ 159 (256)
T 2d1y_A 118 LAAREMRKVGGGAIVNVASVQGLFAEQ--------------------------------------ENAAYNASKGGLVNL 159 (256)
T ss_dssp HHHHHHHTTTCEEEEEECCGGGTSBCT--------------------------------------TBHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEEEccccccCCCC--------------------------------------CChhHHHHHHHHHHH
Confidence 86532 2568999999986542210 016799999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..++.+.+++||.+.++
T Consensus 160 ~~~la~e~~~~gi~v~~v~Pg~v~t~ 185 (256)
T 2d1y_A 160 TRSLALDLAPLRIRVNAVAPGAIATE 185 (256)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHhhcCeEEEEEeeCCccCc
Confidence 8765 24899999999988753
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.26 E-value=2e-11 Score=126.23 Aligned_cols=166 Identities=19% Similarity=0.193 Sum_probs=109.8
Q ss_pred CcccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccc
Q psy16243 169 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPM 248 (782)
Q Consensus 169 ~p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l 248 (782)
...+.+|+++|||..+..|..+ .+.|.. .+.+|++..|... ..+.+.+.
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~----a~~l~~---------------~G~~V~~~~r~~~---~~~~~~~~--------- 57 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAI----ARLLHK---------------LGSKVIISGSNEE---KLKSLGNA--------- 57 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH---HHHHHHHH---------
T ss_pred cccCCCCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEcCCHH---HHHHHHHH---------
Confidence 3456789999999544444333 233322 2567888888532 11222111
Q ss_pred cccCcccccceeEEecCCCCCCCCCCHHhHHHHhc---CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 249 RKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD---NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 249 ~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~---~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ +++.++++ .+|++||+||.... .+.++..+++|+.|+.++++.
T Consensus 58 ------~~~~~~~~~~D~~~~------~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~ 125 (249)
T 3f9i_A 58 ------LKDNYTIEVCNLANK------EECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNRE 125 (249)
T ss_dssp ------HCSSEEEEECCTTSH------HHHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHH
T ss_pred ------hccCccEEEcCCCCH------HHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 113678889999987 77887776 57999999997542 134567899999999999888
Q ss_pred HHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+... .+..++|++||...+.... ....|+.||+..|.+.
T Consensus 126 ~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~ 167 (249)
T 3f9i_A 126 AIKKMIQKRYGRIINISSIVGIAGNP--------------------------------------GQANYCASKAGLIGMT 167 (249)
T ss_dssp HHHHHHHHTCEEEEEECCCCC--CCS--------------------------------------CSHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcEEEEEccHHhccCCC--------------------------------------CCchhHHHHHHHHHHH
Confidence 6431 2557999999987653210 1167999999998887
Q ss_pred HHc-----CCCCcEEEecCCeEEec
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.. ..|+.+.+++||.|.++
T Consensus 168 ~~la~e~~~~gi~v~~v~PG~v~t~ 192 (249)
T 3f9i_A 168 KSLSYEVATRGITVNAVAPGFIKSD 192 (249)
T ss_dssp HHHHHHHGGGTEEEEEEEECCBC--
T ss_pred HHHHHHHHHcCcEEEEEecCccccC
Confidence 765 35899999999988764
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.2e-11 Score=123.89 Aligned_cols=167 Identities=17% Similarity=0.186 Sum_probs=113.8
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|.... ..+..+++..
T Consensus 9 ~l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~--------- 58 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAI----AGTFAK---------------AGASVVVTDLKSEG--AEAVAAAIRQ--------- 58 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHH----HHHHHH---------------HTCEEEEEESSHHH--HHHHHHHHHH---------
T ss_pred CCCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh---------
Confidence 35689999999644433332 233322 15678888875431 2222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc------hhhHHHHHHhhHHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 59 ----~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 128 (256)
T 3gaf_A 59 ----AGGKAIGLECNVTDE------QHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQ 128 (256)
T ss_dssp ----TTCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----cCCcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHH
Confidence 124788999999997 77777665 68999999997532 24456789999999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+..++|++||...+.... ....|+.||...|.+
T Consensus 129 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~ 170 (256)
T 3gaf_A 129 LAAPHMQKAGGGAILNISSMAGENTNV--------------------------------------RMASYGSSKAAVNHL 170 (256)
T ss_dssp HHHHHHHHTTCEEEEEECCGGGTCCCT--------------------------------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEEEcCHHHcCCCC--------------------------------------CchHHHHHHHHHHHH
Confidence 86421 2457999999987543210 116899999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..++||.|..+
T Consensus 171 ~~~la~e~~~~gi~vn~v~PG~v~T~ 196 (256)
T 3gaf_A 171 TRNIAFDVGPMGIRVNAIAPGAIKTD 196 (256)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBCCH
T ss_pred HHHHHHHHhhhCcEEEEEEEccccCc
Confidence 8765 34899999999988764
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.26 E-value=3.6e-11 Score=126.83 Aligned_cols=117 Identities=15% Similarity=0.187 Sum_probs=90.2
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.++++++...
T Consensus 71 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 144 (281)
T 3s55_A 71 RRCISAKVDVKDR------AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPG 144 (281)
T ss_dssp CCEEEEECCTTCH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4788999999997 77777765 68999999997532 2456678999999999999986321
Q ss_pred ---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 ---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 ---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+..++|++||...+.... ....|+.||...+.+.+..
T Consensus 145 ~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la 186 (281)
T 3s55_A 145 MIKRNYGRIVTVSSMLGHSANF--------------------------------------AQASYVSSKWGVIGLTKCAA 186 (281)
T ss_dssp HHHHTCEEEEEECCGGGGSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEECChhhcCCCC--------------------------------------CCchhHHHHHHHHHHHHHHH
Confidence 2567999999987653210 1168999999999988765
Q ss_pred ----CCCCcEEEecCCeEEeccC
Q psy16243 399 ----GAGMPVAMVRPSIVIATNK 417 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G~~~ 417 (782)
..|+++.+++||.|.++..
T Consensus 187 ~e~~~~gi~vn~v~PG~v~t~~~ 209 (281)
T 3s55_A 187 HDLVGYGITVNAVAPGNIETPMT 209 (281)
T ss_dssp HHTGGGTEEEEEEEECSBCSTTT
T ss_pred HHHhhcCcEEEEEecCcccCccc
Confidence 2489999999999988643
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=6.8e-11 Score=123.01 Aligned_cols=167 Identities=18% Similarity=0.165 Sum_probs=111.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ....+..+++..
T Consensus 5 l~~k~vlITGasggiG~~~----a~~l~~---------------~G~~V~~~~r~~~-~~~~~~~~~l~~---------- 54 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSM----AIRFAT---------------EKAKVVVNYRSKE-DEANSVLEEIKK---------- 54 (261)
T ss_dssp GTTCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESSCH-HHHHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCChHHHHH----HHHHHH---------------CCCEEEEEcCCCh-HHHHHHHHHHHh----------
Confidence 3478999999544444332 233322 2567888888321 111222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++++++ .+|+|||+||.... .+.++..+++|+.|+.++++
T Consensus 55 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 125 (261)
T 1gee_A 55 ---VGGEAIAVKGDVTVE------SDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSR 125 (261)
T ss_dssp ---TTCEEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---cCCceEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHH
Confidence 113678899999987 77777665 68999999997542 14456788999999999888
Q ss_pred HHHHc---cC-CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKEM---KQ-LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~~---~~-~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+... .+ ..++|++||...+... +....|+.||...|.
T Consensus 126 ~~~~~~~~~~~~~~iv~isS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~ 167 (261)
T 1gee_A 126 EAIKYFVENDIKGTVINMSSVHEKIPW--------------------------------------PLFVHYAASKGGMKL 167 (261)
T ss_dssp HHHHHHHHTTCCCEEEEECCGGGTSCC--------------------------------------TTCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEEeCCHHhcCCC--------------------------------------CCccHHHHHHHHHHH
Confidence 76542 13 5799999997654210 011689999998888
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.... ..++++.++|||.+.++
T Consensus 168 ~~~~la~e~~~~gi~v~~v~Pg~v~t~ 194 (261)
T 1gee_A 168 MTETLALEYAPKGIRVNNIGPGAINTP 194 (261)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECSBCSG
T ss_pred HHHHHHHHhcccCeEEEEEeeCCcCCc
Confidence 87665 34899999999999875
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.25 E-value=7.2e-11 Score=121.94 Aligned_cols=166 Identities=18% Similarity=0.207 Sum_probs=112.1
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++..
T Consensus 2 ~k~vlItGasggiG~~~----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~~~------------ 48 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAI----ATRFLA---------------RGDRVAALDLSAE--TLEETARTHWH------------ 48 (250)
T ss_dssp CCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHST------------
T ss_pred CCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHH------------
Confidence 57899999544433332 233322 2567888888643 12221222101
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc----------hhhHHHHHHhhHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF----------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f----------~~~~~~~~~~Nv~gt~~Ll 316 (782)
....++.++.+|++++ ++++++++ ++|+|||+|+.... .+.++..+++|+.|+.+++
T Consensus 49 ~~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 122 (250)
T 2cfc_A 49 AYADKVLRVRADVADE------GDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122 (250)
T ss_dssp TTGGGEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHH
T ss_pred hcCCcEEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHH
Confidence 0124788999999987 77777766 78999999986532 1345678899999998777
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+... .+..++|++||..++.... ....|+.||...|.
T Consensus 123 ~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~ 164 (250)
T 2cfc_A 123 RAVLPHMLLQGAGVIVNIASVASLVAFP--------------------------------------GRSAYTTSKGAVLQ 164 (250)
T ss_dssp HHHHHHHHHHTCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEECChhhccCCC--------------------------------------CchhHHHHHHHHHH
Confidence 665321 2578999999987653210 11689999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+++.+ ..|+++.++|||.++++.
T Consensus 165 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 192 (250)
T 2cfc_A 165 LTKSVAVDYAGSGIRCNAVCPGMIETPM 192 (250)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred HHHHHHHHhcccCeEEEEEEeCcCccCc
Confidence 98776 248999999999998753
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.24 E-value=6.9e-11 Score=122.78 Aligned_cols=162 Identities=15% Similarity=0.145 Sum_probs=111.5
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... +.. .+++..
T Consensus 3 ~~k~vlVTGas~giG~~i----a~~l~~---------------~G~~V~~~~r~~~-~~~---~~~l~~----------- 48 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGI----AQVLAR---------------AGANIVLNGFGDP-APA---LAEIAR----------- 48 (255)
T ss_dssp TTCEEEESSCSSHHHHHH----HHHHHH---------------TTCEEEEECSSCC-HHH---HHHHHT-----------
T ss_pred CCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCch-HHH---HHHHHh-----------
Confidence 478999999544444333 233322 2567888888654 212 222211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.++.+.
T Consensus 49 --~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~ 120 (255)
T 2q2v_A 49 --HGVKAVHHPADLSDV------AQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRL 120 (255)
T ss_dssp --TSCCEEEECCCTTSH------HHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred --cCCceEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 013678899999987 77877776 78999999996532 244567899999987777666
Q ss_pred H----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 319 A----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 319 a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+ ++. +..++|++||...+.... ....|+.||...+.+
T Consensus 121 ~~~~~~~~-~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~ 161 (255)
T 2q2v_A 121 ALPGMRAR-NWGRIINIASVHGLVGST--------------------------------------GKAAYVAAKHGVVGL 161 (255)
T ss_dssp HHHHHHHT-TCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHH
T ss_pred HHHHHHHc-CCcEEEEEcCchhccCCC--------------------------------------CchhHHHHHHHHHHH
Confidence 4 443 568999999987653210 016799999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+++.++|||.+.++
T Consensus 162 ~~~la~e~~~~gi~v~~v~Pg~v~t~ 187 (255)
T 2q2v_A 162 TKVVGLETATSNVTCNAICPGWVLTP 187 (255)
T ss_dssp HHHHHHHTTTSSEEEEEEEESSBCCH
T ss_pred HHHHHHHhcccCcEEEEEeeCCCcCc
Confidence 8765 35899999999999875
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.24 E-value=5.6e-11 Score=124.01 Aligned_cols=168 Identities=17% Similarity=0.244 Sum_probs=114.1
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|... +.+|+++.|.... ..+.+.+...
T Consensus 6 ~~k~vlVTGas~gIG~~~----a~~l~~~---------------G~~v~~~~~~~~~--~~~~~~~~~~----------- 53 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQV----TEKLLAK---------------GYSVTVTYHSDTT--AMETMKETYK----------- 53 (264)
T ss_dssp CCCEEEETTTTSHHHHHH----HHHHHHT---------------TCEEEEEESSCHH--HHHHHHHHTG-----------
T ss_pred ccCEEEEeCCCchhHHHH----HHHHHHC---------------CCEEEEEcCCChH--HHHHHHHHHH-----------
Confidence 368999999544444333 3344322 5677777665431 2233333221
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCccc-----Cc----hhhHHHHHHhhHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATV-----RF----DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v-----~f----~~~~~~~~~~Nv~gt~~Ll 316 (782)
....++.++.+|++++ ++++++++ .+|++||+||.. .+ .+.++..+++|+.|+.+++
T Consensus 54 -~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 126 (264)
T 3i4f_A 54 -DVEERLQFVQADVTKK------EDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLL 126 (264)
T ss_dssp -GGGGGEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred -hcCCceEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHH
Confidence 1124789999999998 77777765 689999999931 11 2445678999999999999
Q ss_pred HHH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+++ ++. +..++|++||..+.+..+. .....|+.||+..|
T Consensus 127 ~~~~~~~~~~-~~g~iv~iss~~~~~~~~~------------------------------------~~~~~Y~asKaa~~ 169 (264)
T 3i4f_A 127 KLVVPVMRKQ-NFGRIINYGFQGADSAPGW------------------------------------IYRSAFAAAKVGLV 169 (264)
T ss_dssp HHHHHHHHHH-TCEEEEEECCTTGGGCCCC------------------------------------TTCHHHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCeEEEEeechhcccCCC------------------------------------CCCchhHHHHHHHH
Confidence 987 443 5689999998754422110 01168999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+.+.. ..|+++.+++||.|.++.
T Consensus 170 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 198 (264)
T 3i4f_A 170 SLTKTVAYEEAEYGITANMVCPGDIIGEM 198 (264)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCCCGGG
T ss_pred HHHHHHHHHhhhcCcEEEEEccCCccCcc
Confidence 988765 258999999999998764
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=2.9e-11 Score=125.97 Aligned_cols=166 Identities=17% Similarity=0.182 Sum_probs=112.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 12 l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~---------- 60 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAI----ARRLAQ---------------DGAHVVVSSRKQEN--VDRTVATLQG---------- 60 (260)
T ss_dssp TTTCEEEESSCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH----------
T ss_pred CCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh----------
Confidence 4579999999544444333 233322 25678888886421 1222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.+++
T Consensus 61 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~ 131 (260)
T 2zat_A 61 ---EGLSVTGTVCHVGKA------EDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMT 131 (260)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---cCCceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence 013678899999987 77776665 68999999996431 1345678899999999998
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+++... .+..++|++||..++.... ....|+.||...|.
T Consensus 132 ~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~ 173 (260)
T 2zat_A 132 KAVVPEMEKRGGGSVLIVSSVGAYHPFP--------------------------------------NLGPYNVSKTALLG 173 (260)
T ss_dssp HHHHHHHHHTTCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEechhhcCCCC--------------------------------------CchhHHHHHHHHHH
Confidence 886421 2568999999987654210 01679999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+++.+++||.+.++
T Consensus 174 ~~~~la~e~~~~gi~v~~v~Pg~v~t~ 200 (260)
T 2zat_A 174 LTKNLAVELAPRNIRVNCLAPGLIKTN 200 (260)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred HHHHHHHHhcccCeEEEEEEECcccCc
Confidence 88776 24899999999988754
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.24 E-value=6.9e-11 Score=122.15 Aligned_cols=166 Identities=17% Similarity=0.183 Sum_probs=111.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++ .
T Consensus 4 ~~~k~vlVtGasggiG~~~----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~-~---------- 51 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAI----ATKFVE---------------EGAKVMITGRHSD--VGEKAAKSV-G---------- 51 (251)
T ss_dssp TTTCEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHH-C----------
T ss_pred CCCcEEEEeCCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHh-h----------
Confidence 3478999999544443332 233322 2567888888632 111111211 1
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
. ..++.++.+|++++ ++++++++ .+|+|||+|+.... .+.++..+++|+.|+..+.+
T Consensus 52 --~-~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~ 122 (251)
T 1zk4_A 52 --T-PDQIQFFQHDSSDE------DGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122 (251)
T ss_dssp --C-TTTEEEEECCTTCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred --c-cCceEEEECCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHH
Confidence 0 14788999999987 77777665 48999999996532 13456789999998888777
Q ss_pred HHHHc---cCC-ceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKEM---KQL-KSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~~---~~~-~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+... .+. .++|++||..++.... ....|+.||...|.
T Consensus 123 ~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~ 164 (251)
T 1zk4_A 123 LGIQRMKNKGLGASIINMSSIEGFVGDP--------------------------------------SLGAYNASKGAVRI 164 (251)
T ss_dssp HHHHHHTTSSSCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCchhccCCC--------------------------------------CCccchHHHHHHHH
Confidence 64321 244 7999999987653210 11689999999999
Q ss_pred HHHHc-------CCCCcEEEecCCeEEecc
Q psy16243 394 MVRRG-------GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 394 ll~~~-------~~glp~~IvRp~~v~G~~ 416 (782)
++..+ ..++++.++|||.+.++.
T Consensus 165 ~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~ 194 (251)
T 1zk4_A 165 MSKSAALDCALKDYDVRVNTVHPGYIKTPL 194 (251)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred HHHHHHHHhcccCCCeEEEEEeeCcCcchh
Confidence 88754 358999999999998753
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=5.5e-11 Score=123.40 Aligned_cols=166 Identities=14% Similarity=0.170 Sum_probs=111.5
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccce-eeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLK-VAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~-i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
.+|+++|||..+..|..+ .+.|... +.+ |+++.|.... ...+.+.+..
T Consensus 4 ~~k~vlVtGas~gIG~~~----a~~l~~~---------------G~~~v~~~~r~~~~-~~~~~l~~~~----------- 52 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDT----SRELVKR---------------NLKNFVILDRVENP-TALAELKAIN----------- 52 (254)
T ss_dssp TTCEEEEETTTSHHHHHH----HHHHHHT---------------CCSEEEEEESSCCH-HHHHHHHHHC-----------
T ss_pred CCcEEEEECCCChHHHHH----HHHHHHC---------------CCcEEEEEecCchH-HHHHHHHHhC-----------
Confidence 478999999544333322 2333221 444 7778786532 1222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHcc-
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMK- 323 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~- 323 (782)
+ ..++.++.+|++++ .++++++++ .+|++||+||... .+.++..+++|+.|+.++++++...-
T Consensus 53 -~--~~~~~~~~~D~~~~-----~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~ 123 (254)
T 1sby_A 53 -P--KVNITFHTYDVTVP-----VAESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWD 123 (254)
T ss_dssp -T--TSEEEEEECCTTSC-----HHHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHC
T ss_pred -C--CceEEEEEEecCCC-----hHHHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHH
Confidence 1 13688999999975 134444443 6899999999764 46678899999999999999876431
Q ss_pred --C---CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 324 --Q---LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 324 --~---~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
+ -.++|++||...+.... ....|+.||...|.+.+..
T Consensus 124 ~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~l 165 (254)
T 1sby_A 124 KRKGGPGGIIANICSVTGFNAIH--------------------------------------QVPVYSASKAAVVSFTNSL 165 (254)
T ss_dssp GGGTCCCEEEEEECCGGGTSCCT--------------------------------------TSHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEEECchhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHH
Confidence 1 35799999987653210 0168999999999998775
Q ss_pred C-----CCCcEEEecCCeEEecc
Q psy16243 399 G-----AGMPVAMVRPSIVIATN 416 (782)
Q Consensus 399 ~-----~glp~~IvRp~~v~G~~ 416 (782)
. .|+++.+++||.|.++.
T Consensus 166 a~~~~~~gi~v~~v~Pg~v~t~~ 188 (254)
T 1sby_A 166 AKLAPITGVTAYSINPGITRTPL 188 (254)
T ss_dssp HHHHHHHSEEEEEEEECSEESHH
T ss_pred HHHhccCCeEEEEEecCCccCcc
Confidence 2 48999999999998764
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.23 E-value=7.3e-11 Score=123.24 Aligned_cols=168 Identities=20% Similarity=0.170 Sum_probs=114.6
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|++..|.... ..+..+++.+.
T Consensus 8 l~~k~vlVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~~--------- 57 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGI----ATVFAR---------------AGANVAVAGRSTAD--IDACVADLDQL--------- 57 (262)
T ss_dssp CTTCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHTT---------
T ss_pred CCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHhh---------
Confidence 5689999999544433332 233322 25678888886431 22222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 58 ---~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 128 (262)
T 3pk0_A 58 ---GSGKVIGVQTDVSDR------AQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQ 128 (262)
T ss_dssp ---SSSCEEEEECCTTSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---CCCcEEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence 114789999999997 77777665 68999999997532 24456789999999999998
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+..++|++||........ +....|+.||...|.+
T Consensus 129 ~~~~~m~~~~~g~iv~isS~~~~~~~~-------------------------------------~~~~~Y~asK~a~~~l 171 (262)
T 3pk0_A 129 ACLDALIASGSGRVVLTSSITGPITGY-------------------------------------PGWSHYGATKAAQLGF 171 (262)
T ss_dssp HHHHHHHHHSSCEEEEECCSBTTTBCC-------------------------------------TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEEEechhhccCCC-------------------------------------CCChhhHHHHHHHHHH
Confidence 86543 2567999999986421100 0116899999999999
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+++.+++||.|.++
T Consensus 172 ~~~la~e~~~~gi~vn~v~PG~v~t~ 197 (262)
T 3pk0_A 172 MRTAAIELAPHKITVNAIMPGNIMTE 197 (262)
T ss_dssp HHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred HHHHHHHHHhhCcEEEEEEeCcCcCc
Confidence 8776 25899999999999875
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=8.5e-11 Score=122.46 Aligned_cols=166 Identities=20% Similarity=0.228 Sum_probs=113.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 7 l~~k~vlVTGas~giG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~---------- 55 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGI----VEELAS---------------LGASVYTCSRNQKE--LNDCLTQWRS---------- 55 (260)
T ss_dssp CTTCEEEEESCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH----------
T ss_pred CCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh----------
Confidence 4578999999544433332 233322 25678888886421 1222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh--------cCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV--------DNIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~--------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ +++++++ ..+|++||+|+.... .+.++..+++|+.|+.+++
T Consensus 56 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~ 126 (260)
T 2ae2_A 56 ---KGFKVEASVCDLSSR------SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLS 126 (260)
T ss_dssp ---TTCEEEEEECCTTCH------HHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---cCCcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence 013688899999987 7777766 468999999996532 2345678899999999999
Q ss_pred HHHHH---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKE---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+++.. ..+..++|++||...+.... ....|+.||...|.
T Consensus 127 ~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~ 168 (260)
T 2ae2_A 127 VLAHPFLKASERGNVVFISSVSGALAVP--------------------------------------YEAVYGATKGAMDQ 168 (260)
T ss_dssp HHHHHHHHHTSSEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEEEcchhhccCCC--------------------------------------CcchHHHHHHHHHH
Confidence 98742 12568999999986543210 11679999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+++.+++||.+.++
T Consensus 169 ~~~~la~e~~~~gi~v~~v~Pg~v~t~ 195 (260)
T 2ae2_A 169 LTRCLAFEWAKDNIRVNGVGPGVIATS 195 (260)
T ss_dssp HHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred HHHHHHHHHhhcCcEEEEEecCCCCCc
Confidence 98765 24899999999988764
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.9e-10 Score=120.08 Aligned_cols=166 Identities=17% Similarity=0.139 Sum_probs=112.9
Q ss_pred cCCCeeEeeccc--cCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 172 YLSKMVAVTGDC--LKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 172 ~~~k~vlvTG~~--~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
+.+|+++|||.. +.+|.. ..+.|.. .+.+|+++.|.... .+.++++...
T Consensus 19 l~~k~vlVTGas~~~gIG~~----ia~~l~~---------------~G~~V~~~~r~~~~---~~~~~~l~~~------- 69 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYG----IAKSFHR---------------EGAQLAFTYATPKL---EKRVREIAKG------- 69 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHH----HHHHHHH---------------TTCEEEEEESSGGG---HHHHHHHHHH-------
T ss_pred cCCCEEEEECCCCCCcHHHH----HHHHHHH---------------cCCEEEEEeCCHHH---HHHHHHHHHh-------
Confidence 457899999953 333322 2333332 25678888886532 2233322110
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----------hhhHHHHHHhhHHH
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----------DAHLKVAVSINLRA 311 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~g 311 (782)
..++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|
T Consensus 70 ------~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g 137 (285)
T 2p91_A 70 ------FGSDLVVKCDVSLD------EDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYS 137 (285)
T ss_dssp ------TTCCCEEECCTTCH------HHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHH
T ss_pred ------cCCeEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHH
Confidence 11367889999987 77777665 67999999997532 13456789999999
Q ss_pred HHHHHHHHHHcc--CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHH
Q psy16243 312 TKALLEMAKEMK--QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQ 389 (782)
Q Consensus 312 t~~Lle~a~~~~--~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~ 389 (782)
+.++++++...- +-.++|++||...+.... ....|+.||.
T Consensus 138 ~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~ 179 (285)
T 2p91_A 138 LIALTRELLPLMEGRNGAIVTLSYYGAEKVVP--------------------------------------HYNVMGIAKA 179 (285)
T ss_dssp HHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT--------------------------------------TTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEEccchhccCCC--------------------------------------CccHHHHHHH
Confidence 999999986541 236999999976542210 0157999999
Q ss_pred HHHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 390 VAEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 390 ~aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
..|.+.+.. ..|+.+.+++||.|.++.
T Consensus 180 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 211 (285)
T 2p91_A 180 ALESTVRYLAYDIAKHGHRINAISAGPVKTLA 211 (285)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEECCCCCSC
T ss_pred HHHHHHHHHHHHhcccCcEEEEEEeCcccCch
Confidence 999988765 358999999999998754
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.4e-10 Score=121.26 Aligned_cols=166 Identities=17% Similarity=0.145 Sum_probs=111.3
Q ss_pred cCCCeeEeeccc--cCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 172 YLSKMVAVTGDC--LKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 172 ~~~k~vlvTG~~--~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
+.+|+++|||.. +..|..+ .+.|.. .+.+|+++.|.... .+.++++...
T Consensus 7 l~~k~vlVTGas~~~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~---~~~~~~l~~~------- 57 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGI----AQAMHR---------------EGAELAFTYQNDKL---KGRVEEFAAQ------- 57 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHH----HHHHHH---------------TTCEEEEEESSTTT---HHHHHHHHHH-------
T ss_pred cCCCEEEEECCCCCCCHHHHH----HHHHHH---------------CCCEEEEEcCcHHH---HHHHHHHHHh-------
Confidence 347899999954 3333222 333332 25678888886522 2223222110
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc------------hhhHHHHHHhhHH
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF------------DAHLKVAVSINLR 310 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f------------~~~~~~~~~~Nv~ 310 (782)
..+..++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.
T Consensus 58 ------~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~ 125 (265)
T 1qsg_A 58 ------LGSDIVLQCDVAED------ASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 125 (265)
T ss_dssp ------TTCCCEEECCTTCH------HHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTH
T ss_pred ------cCCcEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhH
Confidence 01246789999987 77777665 57999999997531 1345578999999
Q ss_pred HHHHHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHH
Q psy16243 311 ATKALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQ 389 (782)
Q Consensus 311 gt~~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~ 389 (782)
|+.++++++... .+-.++|++||...+.... ....|+.||.
T Consensus 126 g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~ 167 (265)
T 1qsg_A 126 SFVAMAKACRSMLNPGSALLTLSYLGAERAIP--------------------------------------NYNVMGLAKA 167 (265)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT--------------------------------------TTTHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCEEEEEcchhhccCCC--------------------------------------CchHHHHHHH
Confidence 999999998753 1124899999976542210 0157999999
Q ss_pred HHHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 390 VAEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 390 ~aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
..|.+.+.. ..|+++.+++||.|.++.
T Consensus 168 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (265)
T 1qsg_A 168 SLEANVRYMANAMGPEGVRVNAISAGPIRTLA 199 (265)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeCCCccch
Confidence 999998765 348999999999998753
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.22 E-value=9.9e-11 Score=124.40 Aligned_cols=169 Identities=17% Similarity=0.146 Sum_probs=114.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|... +.+|++..|....... +.+.+..+
T Consensus 47 l~~k~vlVTGas~GIG~ai----a~~la~~---------------G~~V~~~~~~~~~~~~-~~~~~~~~---------- 96 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAA----AIAYARE---------------GADVAINYLPAEEEDA-QQVKALIE---------- 96 (294)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHHT---------------TCEEEEECCGGGHHHH-HHHHHHHH----------
T ss_pred CCCCEEEEeCCCcHHHHHH----HHHHHHC---------------CCEEEEEeCCcchhHH-HHHHHHHH----------
Confidence 5689999999644443333 2333322 5677777775332222 22222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Ll 316 (782)
..-.++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.+++
T Consensus 97 --~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 168 (294)
T 3r3s_A 97 --ECGRKAVLLPGDLSDE------SFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWIT 168 (294)
T ss_dssp --HTTCCEEECCCCTTSH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred --HcCCcEEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence 1124788999999987 67666654 67999999997431 1445678999999999999
Q ss_pred HHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 317 EMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 317 e~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+++... .+-.++|++||...+.... ....|+.||...|.+.
T Consensus 169 ~~~~~~~~~~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~ 210 (294)
T 3r3s_A 169 QEAIPLLPKGASIITTSSIQAYQPSP--------------------------------------HLLDYAATKAAILNYS 210 (294)
T ss_dssp HHHGGGCCTTCEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCEEEEECChhhccCCC--------------------------------------CchHHHHHHHHHHHHH
Confidence 998754 1224899999987654311 0167999999999988
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.. ..|+++..++||.|.++.
T Consensus 211 ~~la~e~~~~gI~vn~v~PG~v~t~~ 236 (294)
T 3r3s_A 211 RGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_dssp HHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred HHHHHHHhhcCeEEEEEecCcCcccc
Confidence 765 348999999999998754
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.4e-10 Score=119.34 Aligned_cols=169 Identities=20% Similarity=0.163 Sum_probs=114.9
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+ .|+..+..+.|... +.+|+++.|.... ..+..+++..
T Consensus 19 ~l~~k~vlITGasg---~GIG~~~a~~l~~~---------------G~~V~~~~r~~~~--~~~~~~~l~~--------- 69 (266)
T 3o38_A 19 LLKGKVVLVTAAAG---TGIGSTTARRALLE---------------GADVVISDYHERR--LGETRDQLAD--------- 69 (266)
T ss_dssp TTTTCEEEESSCSS---SSHHHHHHHHHHHT---------------TCEEEEEESCHHH--HHHHHHHHHT---------
T ss_pred CCCCCEEEEECCCC---CchHHHHHHHHHHC---------------CCEEEEecCCHHH--HHHHHHHHHh---------
Confidence 46689999999432 24433334444322 5678888886431 2222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
....++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.+++
T Consensus 70 ---~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 140 (266)
T 3o38_A 70 ---LGLGRVEAVVCDVTST------EAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRAT 140 (266)
T ss_dssp ---TCSSCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---cCCCceEEEEeCCCCH------HHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence 0124789999999987 77777665 56999999997432 2345678999999999999
Q ss_pred HHHHHc----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMAKEM----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a~~~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+.+... ++..++|++||.+.+.... ....|+.||...|
T Consensus 141 ~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~ 182 (266)
T 3o38_A 141 RAALRYFRGVDHGGVIVNNASVLGWRAQH--------------------------------------SQSHYAAAKAGVM 182 (266)
T ss_dssp HHHHHHHHTSSCCEEEEEECCGGGTCCCT--------------------------------------TCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEeCCHHHcCCCC--------------------------------------CCchHHHHHHHHH
Confidence 987643 2456899999986543210 1168999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+.+..++||.|..+
T Consensus 183 ~~~~~la~e~~~~gi~v~~v~PG~v~t~ 210 (266)
T 3o38_A 183 ALTRCSAIEAVEFGVRINAVSPSIARHK 210 (266)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCCCC-
T ss_pred HHHHHHHHHHHHcCcEEEEEeCCcccch
Confidence 998765 35899999999988764
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.22 E-value=8.5e-11 Score=122.94 Aligned_cols=168 Identities=17% Similarity=0.125 Sum_probs=113.0
Q ss_pred cccCCCeeEeeccc--cCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccc
Q psy16243 170 PHYLSKMVAVTGDC--LKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDP 247 (782)
Q Consensus 170 p~~~~k~vlvTG~~--~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~ 247 (782)
..+.+|+++|||.. +.+|.++ .+.|... +.+|+++.|..... +.++++.+.
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~i----a~~l~~~---------------G~~V~~~~r~~~~~---~~~~~~~~~----- 62 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGI----AKACKRE---------------GAELAFTYVGDRFK---DRITEFAAE----- 62 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHH----HHHHHHT---------------TCEEEEEESSGGGH---HHHHHHHHH-----
T ss_pred cccCCCEEEEeCCCCCCcHHHHH----HHHHHHc---------------CCCEEEEecchhhH---HHHHHHHHH-----
Confidence 45678999999954 3333322 2333322 56788888874332 333332211
Q ss_pred ccccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc------------hhhHHHHHHhh
Q psy16243 248 MRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF------------DAHLKVAVSIN 308 (782)
Q Consensus 248 l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f------------~~~~~~~~~~N 308 (782)
..++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|
T Consensus 63 --------~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n 128 (271)
T 3ek2_A 63 --------FGSELVFPCDVADD------AQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDIS 128 (271)
T ss_dssp --------TTCCCEEECCTTCH------HHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHH
T ss_pred --------cCCcEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhh
Confidence 12478899999997 77777765 56999999997532 23456789999
Q ss_pred HHHHHHHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHH
Q psy16243 309 LRATKALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALT 387 (782)
Q Consensus 309 v~gt~~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~S 387 (782)
+.|+.++++.+... .+-.++|++||...+.... ....|+.|
T Consensus 129 ~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~as 170 (271)
T 3ek2_A 129 AYSFPALAKAALPMLSDDASLLTLSYLGAERAIP--------------------------------------NYNTMGLA 170 (271)
T ss_dssp TTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT--------------------------------------TTTHHHHH
T ss_pred HHHHHHHHHHHHHHhccCceEEEEeccccccCCC--------------------------------------CccchhHH
Confidence 99999999998653 1234899999986543210 11689999
Q ss_pred HHHHHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 388 KQVAEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 388 K~~aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
|+..+.+.+.. ..|+.+.+++||.|..+.
T Consensus 171 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 204 (271)
T 3ek2_A 171 KAALEASVRYLAVSLGAKGVRVNAISAGPIKTLA 204 (271)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEecCcccchh
Confidence 99999988765 358999999999988653
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.4e-10 Score=120.98 Aligned_cols=167 Identities=13% Similarity=0.134 Sum_probs=113.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeeccc---ceeeeeecccchhhHHHHHHHhhcccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAH---LKVAVSINLRATKALLEMAKEMKQLKFFDPM 248 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~---~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l 248 (782)
..+|+++|||..+.+|..+ .+.|... + .+|+++.|...... .++++..
T Consensus 19 ~~~k~vlITGasggIG~~l----a~~L~~~---------------G~~~~~V~~~~r~~~~~~---~~~~l~~------- 69 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGL----VKALLNL---------------PQPPQHLFTTCRNREQAK---ELEDLAK------- 69 (267)
T ss_dssp -CCSEEEESCCSSHHHHHH----HHHHHTS---------------SSCCSEEEEEESCTTSCH---HHHHHHH-------
T ss_pred CCCCEEEEECCCCcHHHHH----HHHHHhc---------------CCCCcEEEEEecChhhhH---HHHHhhc-------
Confidence 5578999999544444333 2333221 3 68888888754322 2222211
Q ss_pred cccCcccccceeEEecCCCCCCCCCCHHhHHHHhc---------CceEEEEcCcccC----c----hhhHHHHHHhhHHH
Q psy16243 249 RKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD---------NIHVVFHCAATVR----F----DAHLKVAVSINLRA 311 (782)
Q Consensus 249 ~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~---------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~g 311 (782)
...++.++.+|++++ ++++.+++ .+|+|||+||... + .+.++..+++|+.|
T Consensus 70 ------~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g 137 (267)
T 1sny_A 70 ------NHSNIHILEIDLRNF------DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVV 137 (267)
T ss_dssp ------HCTTEEEEECCTTCG------GGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred ------cCCceEEEEecCCCh------HHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchH
Confidence 023788999999987 67777766 7999999999754 1 24556788999999
Q ss_pred HHHHHHHHHHc----------cC----CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCcc
Q psy16243 312 TKALLEMAKEM----------KQ----LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIV 377 (782)
Q Consensus 312 t~~Lle~a~~~----------~~----~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~ 377 (782)
+.++++++... +. ..++|++||..++.....
T Consensus 138 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------------------------------- 182 (267)
T 1sny_A 138 PIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNT----------------------------------- 182 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCC-----------------------------------
T ss_pred HHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCCC-----------------------------------
Confidence 99999987543 11 468999999876543110
Q ss_pred CCCCccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 378 DYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 378 ~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
......|+.||...|.++..+ ..++++.++|||.|..
T Consensus 183 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t 224 (267)
T 1sny_A 183 DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKT 224 (267)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCS
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceec
Confidence 001157999999999998765 2489999999988764
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=9.6e-11 Score=124.81 Aligned_cols=170 Identities=14% Similarity=0.173 Sum_probs=112.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++... .
T Consensus 16 l~~k~vlVTGasggIG~~l----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~~--~------ 66 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAI----VKELLE---------------LGSNVVIASRKLER--LKSAADELQAN--L------ 66 (303)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHHT--S------
T ss_pred CCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHhh--c------
Confidence 5578999999544444333 233322 25678888886421 12222222110 0
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
.+....++.++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++
T Consensus 67 ~~~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 140 (303)
T 1yxm_A 67 PPTKQARVIPIQCNIRNE------EEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCK 140 (303)
T ss_dssp CTTCCCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred cccCCccEEEEecCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 001124789999999987 77777765 48999999995421 23456788999999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+..++|++||....+.+ ....|+.||...+.+
T Consensus 141 ~~~~~~~~~~~~~iv~isS~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~ 181 (303)
T 1yxm_A 141 AVYSSWMKEHGGSIVNIIVPTKAGFP---------------------------------------LAVHSGAARAGVYNL 181 (303)
T ss_dssp HHHHHTHHHHCEEEEEECCCCTTCCT---------------------------------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEeecccCCC---------------------------------------cchhhHHHHHHHHHH
Confidence 97652 134789999998722110 015799999988888
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.... ..|+++.++|||.++|+
T Consensus 182 ~~~la~e~~~~gi~v~~v~Pg~v~t~ 207 (303)
T 1yxm_A 182 TKSLALEWACSGIRINCVAPGVIYSQ 207 (303)
T ss_dssp HHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred HHHHHHHhcccCeEEEEEecCCcccc
Confidence 7665 24899999999999986
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=9.4e-11 Score=121.03 Aligned_cols=165 Identities=15% Similarity=0.173 Sum_probs=111.4
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|++..|.... ..+..+++..
T Consensus 4 ~~k~vlITGas~gIG~~~----a~~l~~---------------~G~~v~~~~r~~~~--~~~~~~~~~~----------- 51 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEV----AHALAS---------------KGATVVGTATSQAS--AEKFENSMKE----------- 51 (247)
T ss_dssp TTCEEEESSCSSHHHHHH----HHHHHH---------------TTCEEEEEESSHHH--HHHHHHHHHH-----------
T ss_pred CCCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh-----------
Confidence 478999999544444333 233322 25678888886432 1111122111
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.++++.
T Consensus 52 --~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 123 (247)
T 3lyl_A 52 --KGFKARGLVLNISDI------ESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKE 123 (247)
T ss_dssp --TTCCEEEEECCTTCH------HHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred --cCCceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 124788999999987 77777665 46999999997532 244567899999999999988
Q ss_pred HHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+... .+..++|++||...+...+ ....|+.||...|.+.
T Consensus 124 ~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~ 165 (247)
T 3lyl_A 124 CVRGMMKKRWGRIISIGSVVGSAGNP--------------------------------------GQTNYCAAKAGVIGFS 165 (247)
T ss_dssp HHHHHHHHTCEEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEEcchhhccCCC--------------------------------------CcHHHHHHHHHHHHHH
Confidence 6432 2456999999986543210 1168999999888877
Q ss_pred HHc-----CCCCcEEEecCCeEEec
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.. ..|+++.+++||.|..+
T Consensus 166 ~~la~e~~~~gi~v~~v~PG~v~t~ 190 (247)
T 3lyl_A 166 KSLAYEVASRNITVNVVAPGFIATD 190 (247)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred HHHHHHHHHcCeEEEEEeeCcEecc
Confidence 665 35899999999988764
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=1.4e-10 Score=122.50 Aligned_cols=167 Identities=14% Similarity=0.165 Sum_probs=111.0
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++..
T Consensus 41 ~l~~k~vlITGasggIG~~l----a~~L~~---------------~G~~V~~~~r~~~--~~~~~~~~l~~--------- 90 (285)
T 2c07_A 41 CGENKVALVTGAGRGIGREI----AKMLAK---------------SVSHVICISRTQK--SCDSVVDEIKS--------- 90 (285)
T ss_dssp CCSSCEEEEESTTSHHHHHH----HHHHTT---------------TSSEEEEEESSHH--HHHHHHHHHHT---------
T ss_pred cCCCCEEEEECCCcHHHHHH----HHHHHH---------------cCCEEEEEcCCHH--HHHHHHHHHHh---------
Confidence 35579999999544444332 233322 2567888766532 11222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++++++++ .+|+|||+||.... .+.++..+++|+.|+.+++
T Consensus 91 ----~~~~~~~~~~Dl~d~------~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 160 (285)
T 2c07_A 91 ----FGYESSGYAGDVSKK------EEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYIT 160 (285)
T ss_dssp ----TTCCEEEEECCTTCH------HHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHH
T ss_pred ----cCCceeEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHH
Confidence 123688899999987 77777664 58999999997532 2456678999999988887
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+... .+..++|++||...+.... ....|+.||...|.
T Consensus 161 ~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~ 202 (285)
T 2c07_A 161 QPISKRMINNRYGRIINISSIVGLTGNV--------------------------------------GQANYSSSKAGVIG 202 (285)
T ss_dssp HHHHHHHHHHTCEEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEECChhhccCCC--------------------------------------CCchHHHHHHHHHH
Confidence 776421 2568999999986542210 01679999999998
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+++.. ..|+++.++|||.+.++
T Consensus 203 ~~~~la~e~~~~gi~v~~v~Pg~v~t~ 229 (285)
T 2c07_A 203 FTKSLAKELASRNITVNAIAPGFISSD 229 (285)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCC-
T ss_pred HHHHHHHHHHHhCcEEEEEEeCcEecC
Confidence 88765 24899999999998765
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.1e-10 Score=122.33 Aligned_cols=117 Identities=19% Similarity=0.202 Sum_probs=86.8
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
.++.++.+|++++ ++++.+++ .+|+|||+||.... .+.++..+++|+.|+..+++.+..
T Consensus 76 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 149 (272)
T 4e3z_A 76 GEAVAIPGDVGNA------ADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVR 149 (272)
T ss_dssp CEEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 4788999999987 77776665 57999999997543 134567899999999999988754
Q ss_pred c------cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 322 M------KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 322 ~------~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
. ++..++|++||...+.... +....|+.||...|.++
T Consensus 150 ~~~~~~~~~~g~iv~isS~~~~~~~~-------------------------------------~~~~~Y~asKaa~~~~~ 192 (272)
T 4e3z_A 150 RMSRLYSGQGGAIVNVSSMAAILGSA-------------------------------------TQYVDYAASKAAIDTFT 192 (272)
T ss_dssp HHCGGGTCCCEEEEEECCTHHHHCCT-------------------------------------TTCHHHHHHHHHHHHHH
T ss_pred HHHHhccCCCCEEEEEcchHhccCCC-------------------------------------CCcchhHHHHHHHHHHH
Confidence 3 1346899999986543210 00156999999999987
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.+ ..|+++.+++||.|.++.
T Consensus 193 ~~la~e~~~~gi~v~~v~PG~v~t~~ 218 (272)
T 4e3z_A 193 IGLAREVAAEGIRVNAVRPGIIETDL 218 (272)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBC---
T ss_pred HHHHHHHHHcCcEEEEEecCCCcCCc
Confidence 765 348999999999998753
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.21 E-value=1.2e-10 Score=122.39 Aligned_cols=166 Identities=19% Similarity=0.169 Sum_probs=113.4
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... .+..+++..
T Consensus 28 ~l~gk~~lVTGas~GIG~ai----a~~la~---------------~G~~V~~~~r~~~~---~~~~~~~~~--------- 76 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAI----AHGYAR---------------AGAHVLAWGRTDGV---KEVADEIAD--------- 76 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESSTHH---HHHHHHHHT---------
T ss_pred CCCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEcCHHHH---HHHHHHHHh---------
Confidence 35689999999654444333 233332 25677877775332 222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++.+.+.+ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 77 ----~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 146 (273)
T 3uf0_A 77 ----GGGSAEAVVADLADL------EGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSR 146 (273)
T ss_dssp ----TTCEEEEEECCTTCH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----cCCcEEEEEecCCCH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHH
Confidence 124688999999987 66665543 68999999997542 23456789999999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+..++|++||...+.... ....|+.||...+.+
T Consensus 147 ~~~~~m~~~~~g~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l 188 (273)
T 3uf0_A 147 SFGTAMLAHGSGRIVTIASMLSFQGGR--------------------------------------NVAAYAASKHAVVGL 188 (273)
T ss_dssp HHHHHHHHHTCEEEEEECCGGGTSCCS--------------------------------------SCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcchHhcCCCC--------------------------------------CChhHHHHHHHHHHH
Confidence 86321 2567899999987553210 116899999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+++..++||.|.++
T Consensus 189 ~~~la~e~~~~gI~vn~v~PG~v~T~ 214 (273)
T 3uf0_A 189 TRALASEWAGRGVGVNALAPGYVVTA 214 (273)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCSG
T ss_pred HHHHHHHHhhcCcEEEEEEeCCCcCC
Confidence 8766 35899999999998865
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.21 E-value=2.5e-10 Score=120.33 Aligned_cols=116 Identities=20% Similarity=0.186 Sum_probs=88.9
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH-
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE- 321 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~- 321 (782)
.++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.++++++..
T Consensus 77 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 150 (280)
T 3pgx_A 77 RKALTRVLDVRDD------AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPA 150 (280)
T ss_dssp CCEEEEECCTTCH------HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 4788999999998 77777765 68999999997542 244567889999999999998643
Q ss_pred ---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 322 ---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 322 ---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
.+.-.++|++||...+.... ....|+.||...+.+.+..
T Consensus 151 ~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~l 192 (280)
T 3pgx_A 151 MIEAGNGGSIVVVSSSAGLKATP--------------------------------------GNGHYSASKHGLTALTNTL 192 (280)
T ss_dssp HHHHCSCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEEEcchhhccCCC--------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 22256899999987543210 0168999999999988765
Q ss_pred -----CCCCcEEEecCCeEEecc
Q psy16243 399 -----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~~ 416 (782)
..|+++..++||.|.++.
T Consensus 193 a~e~~~~gi~vn~v~PG~v~t~~ 215 (280)
T 3pgx_A 193 AIELGEYGIRVNSIHPYSVETPM 215 (280)
T ss_dssp HHHHGGGTEEEEEEEECSBCSTT
T ss_pred HHHhhhcCeEEEEEeeCcccCcc
Confidence 358999999999998753
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=8.7e-11 Score=122.76 Aligned_cols=201 Identities=15% Similarity=0.116 Sum_probs=118.6
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+++|..+ .+.|.. ..+.+|+++.|... ...+..+++..
T Consensus 4 ~k~vlITGasggIG~~~----a~~L~~--------------~~g~~V~~~~r~~~--~~~~~~~~l~~------------ 51 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAI----VRDLCR--------------LFSGDVVLTARDVT--RGQAAVQQLQA------------ 51 (276)
T ss_dssp CCEEEESSCSSHHHHHH----HHHHHH--------------HSSSEEEEEESSHH--HHHHHHHHHHH------------
T ss_pred CCEEEEeCCCcHHHHHH----HHHHHH--------------hcCCeEEEEeCChH--HHHHHHHHHHh------------
Confidence 68999999544444333 233322 02567888888632 12222222211
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
...++.++.+|++++ ++++.+++ .+|+|||+||.... .+..+..+++|+.|+.++++++
T Consensus 52 -~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 124 (276)
T 1wma_A 52 -EGLSPRFHQLDIDDL------QSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 124 (276)
T ss_dssp -TTCCCEEEECCTTCH------HHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred -cCCeeEEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHH
Confidence 013688999999987 77777766 78999999997532 2456678999999999999998
Q ss_pred HHc-cCCceEEEEecceeccC--C--CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 320 KEM-KQLKSFVHVSTAYSNCR--Q--PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 320 ~~~-~~~~~fV~vST~~v~~~--~--~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
... ....++|++||..++.. . +...+.+...+.+.+.+........+.......+. .....+.|+.||...|.+
T Consensus 125 ~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~sK~a~~~~ 203 (276)
T 1wma_A 125 LPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQK-EGWPSSAYGVTKIGVTVL 203 (276)
T ss_dssp GGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTT-TTCCSCHHHHHHHHHHHH
T ss_pred HHhhCCCCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhccccccc-CCCccchhHHHHHHHHHH
Confidence 764 11248999999876532 1 11111111222222222222211111111111110 111117899999999988
Q ss_pred HHHc-----C----CCCcEEEecCCeEEe
Q psy16243 395 VRRG-----G----AGMPVAMVRPSIVIA 414 (782)
Q Consensus 395 l~~~-----~----~glp~~IvRp~~v~G 414 (782)
++.+ . .++.+.+++||.|.+
T Consensus 204 ~~~la~~~~~~~~~~~i~v~~v~PG~v~t 232 (276)
T 1wma_A 204 SRIHARKLSEQRKGDKILLNACCPGWVRT 232 (276)
T ss_dssp HHHHHHHHHHHCTTSCCEEEEEECCSBCS
T ss_pred HHHHHHHhhcccCCCceEEEEecCCcccc
Confidence 8765 1 489999999988764
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=6.7e-11 Score=124.56 Aligned_cols=166 Identities=19% Similarity=0.148 Sum_probs=113.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 20 l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~---------- 68 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEI----ARRLGK---------------EGLRVFVCARGEEG--LRTTLKELRE---------- 68 (277)
T ss_dssp TTSCEEEEETCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH----------
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh----------
Confidence 4579999999544444333 233322 25678888886421 1221222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 69 ---~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 139 (277)
T 2rhc_B 69 ---AGVEADGRTCDVRSV------PEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 139 (277)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---cCCceEEEECCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 013678899999987 77777665 68999999996432 13456788999999999999
Q ss_pred HHHHc-----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 318 MAKEM-----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 318 ~a~~~-----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
++... .+..++|++||...+... +....|+.||...|
T Consensus 140 ~~~~~~~m~~~~~g~iv~isS~~~~~~~--------------------------------------~~~~~Y~asK~a~~ 181 (277)
T 2rhc_B 140 QVLKAGGMLERGTGRIVNIASTGGKQGV--------------------------------------VHAAPYSASKHGVV 181 (277)
T ss_dssp HHHTTTCHHHHTEEEEEEECCGGGTSCC--------------------------------------TTCHHHHHHHHHHH
T ss_pred HHhChhhHhhcCCeEEEEECccccccCC--------------------------------------CCCccHHHHHHHHH
Confidence 87643 245799999998654211 01167999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+++.++|||.+.++
T Consensus 182 ~~~~~la~e~~~~gi~v~~v~PG~v~t~ 209 (277)
T 2rhc_B 182 GFTKALGLELARTGITVNAVCPGFVETP 209 (277)
T ss_dssp HHHHHHHHHHTTTEEEEEEEEECSBCSH
T ss_pred HHHHHHHHHHHHhCcEEEEEecCcCcCc
Confidence 988765 34899999999998864
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.2e-10 Score=121.53 Aligned_cols=163 Identities=17% Similarity=0.126 Sum_probs=111.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++
T Consensus 10 l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~------------ 56 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAI----ARALDK---------------AGATVAIADLDVM--AAQAVVAGL------------ 56 (263)
T ss_dssp CTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHTC------------
T ss_pred CCCCEEEEeCCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHH------------
Confidence 4578999999544433332 233322 2567888888532 111111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++++++++ .+|+|||+|+.... .+.++..+++|+.|+.++++
T Consensus 57 ----~~~~~~~~~D~~d~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~ 126 (263)
T 3ak4_A 57 ----ENGGFAVEVDVTKR------ASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQ 126 (263)
T ss_dssp ----TTCCEEEECCTTCH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----hcCCeEEEEeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence 12677899999987 77777776 78999999996532 13456788999999999998
Q ss_pred HHHHc---cC-CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKEM---KQ-LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~~---~~-~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
++... .+ ..++|++||...+.... ....|+.||...|.
T Consensus 127 ~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~ 168 (263)
T 3ak4_A 127 IACRHFLASNTKGVIVNTASLAAKVGAP--------------------------------------LLAHYSASKFAVFG 168 (263)
T ss_dssp HHHHHHHHTTCCCEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEecccccccCCC--------------------------------------CchhHHHHHHHHHH
Confidence 86542 13 57999999986542210 11689999999998
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+++.++|||.+.++
T Consensus 169 ~~~~la~e~~~~gi~v~~v~Pg~v~t~ 195 (263)
T 3ak4_A 169 WTQALAREMAPKNIRVNCVCPGFVKTA 195 (263)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECSBTTH
T ss_pred HHHHHHHHHhHcCeEEEEEecccccCh
Confidence 88765 34899999999998865
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.1e-10 Score=123.80 Aligned_cols=168 Identities=16% Similarity=0.127 Sum_probs=115.2
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... ..+.+.+...
T Consensus 44 ~l~gk~vlVTGas~GIG~ai----a~~la~---------------~G~~V~~~~r~~~~--~~~~~~~~~~--------- 93 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAV----SIAFAK---------------EGANIAIAYLDEEG--DANETKQYVE--------- 93 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESSCHH--HHHHHHHHHH---------
T ss_pred CCCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCchH--HHHHHHHHHH---------
Confidence 35689999999544433332 233332 25678888876432 1222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~L 315 (782)
....++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.++
T Consensus 94 ---~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l 164 (291)
T 3ijr_A 94 ---KEGVKCVLLPGDLSDE------QHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHV 164 (291)
T ss_dssp ---TTTCCEEEEESCTTSH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred ---hcCCcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence 1124788999999987 77776665 67999999986421 244567899999999999
Q ss_pred HHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 316 LEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 316 le~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++++... .+-.++|++||...+.... ....|+.||...|.+
T Consensus 165 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l 206 (291)
T 3ijr_A 165 TKAALSHLKQGDVIINTASIVAYEGNE--------------------------------------TLIDYSATKGAIVAF 206 (291)
T ss_dssp HHHHHTTCCTTCEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCEEEEEechHhcCCCC--------------------------------------CChhHHHHHHHHHHH
Confidence 9998753 2345899999987653210 016799999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..++||.|.++
T Consensus 207 ~~~la~e~~~~gi~vn~v~PG~v~T~ 232 (291)
T 3ijr_A 207 TRSLSQSLVQKGIRVNGVAPGPIWTP 232 (291)
T ss_dssp HHHHHHHHGGGTCEEEEEEECSBCST
T ss_pred HHHHHHHHhhcCEEEEEEeeCCCcCC
Confidence 8765 34899999999998864
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.20 E-value=9.2e-11 Score=120.79 Aligned_cols=167 Identities=14% Similarity=0.144 Sum_probs=111.0
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeeccc--ceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAH--LKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~--~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+|+++|||..+..|..+ .+.|.. .+ .+|+++.|..... +.+.+.
T Consensus 3 ~k~vlItGasggiG~~l----a~~l~~---------------~g~~~~V~~~~r~~~~~---~~l~~~------------ 48 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGL----VQQLVK---------------DKNIRHIIATARDVEKA---TELKSI------------ 48 (250)
T ss_dssp CSEEEESSCSSHHHHHH----HHHHHT---------------CTTCCEEEEEESSGGGC---HHHHTC------------
T ss_pred CCEEEEecCCchHHHHH----HHHHHh---------------cCCCcEEEEEecCHHHH---HHHHhc------------
Confidence 68899999544333322 233322 14 6888888864322 222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc---------CceEEEEcCcccC-c-------hhhHHHHHHhhHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD---------NIHVVFHCAATVR-F-------DAHLKVAVSINLRATKA 314 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~---------~vdiViH~Aa~v~-f-------~~~~~~~~~~Nv~gt~~ 314 (782)
...++.++.+|++++ ++++++++ .+|+|||+||... . .+.++..+++|+.|+.+
T Consensus 49 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~ 119 (250)
T 1yo6_A 49 ---KDSRVHVLPLTVTCD------KSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119 (250)
T ss_dssp ---CCTTEEEEECCTTCH------HHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHH
T ss_pred ---cCCceEEEEeecCCH------HHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHH
Confidence 024788999999987 77777766 7999999999754 1 24456789999999999
Q ss_pred HHHHHHHc---c------C-----CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCC
Q psy16243 315 LLEMAKEM---K------Q-----LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYW 380 (782)
Q Consensus 315 Lle~a~~~---~------~-----~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~ 380 (782)
+++++... . + ..++|++||...+..... +..++ ..
T Consensus 120 l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--~~~~~-----------------------------~~ 168 (250)
T 1yo6_A 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT--SGSAQ-----------------------------FP 168 (250)
T ss_dssp HHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC--STTSS-----------------------------SC
T ss_pred HHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc--ccccc-----------------------------CC
Confidence 99886542 1 2 679999999866533210 00000 01
Q ss_pred CccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 381 PNTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 381 pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
...|+.||+..|.+++.+ ..|+.+.++|||.|.+
T Consensus 169 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t 207 (250)
T 1yo6_A 169 VLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQT 207 (250)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceec
Confidence 168999999999998765 2489999999998865
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.7e-10 Score=121.31 Aligned_cols=166 Identities=16% Similarity=0.186 Sum_probs=109.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|..... +.+.+...
T Consensus 32 l~~k~vlITGasggIG~~l----a~~L~~---------------~G~~V~~~~r~~~~~---~~~~~~~~---------- 79 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAV----AEAYAQ---------------AGADVAIWYNSHPAD---EKAEHLQK---------- 79 (279)
T ss_dssp CTTCEEEETTTTSSHHHHH----HHHHHH---------------HTCEEEEEESSSCCH---HHHHHHHH----------
T ss_pred CCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHHHH---HHHHHHHH----------
Confidence 4579999999544444333 233322 156788888864321 11111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccCc------h---hhHHHHHHhhHHH----
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVRF------D---AHLKVAVSINLRA---- 311 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~f------~---~~~~~~~~~Nv~g---- 311 (782)
....++.++.+|++++ ++++++++. +|+|||+||.... . +.++..+++|+.|
T Consensus 80 --~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~ 151 (279)
T 3ctm_A 80 --TYGVHSKAYKCNISDP------KSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYC 151 (279)
T ss_dssp --HHCSCEEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHH
T ss_pred --hcCCcceEEEeecCCH------HHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHH
Confidence 0113688899999987 777776654 8999999996533 2 2345688999999
Q ss_pred HHHHHHHHHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 312 TKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 312 t~~Lle~a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
++.+++.+++. +..++|++||..++.... + +....|+.||+..
T Consensus 152 ~~~~~~~~~~~-~~~~iv~isS~~~~~~~~--------~----------------------------~~~~~Y~~sK~a~ 194 (279)
T 3ctm_A 152 SHNIGKIFKKN-GKGSLIITSSISGKIVNI--------P----------------------------QLQAPYNTAKAAC 194 (279)
T ss_dssp HHHHHHHHHHH-TCCEEEEECCCTTSCC---------------------------------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCeEEEECchHhccCCC--------C----------------------------CCcccHHHHHHHH
Confidence 56777777765 678999999986532200 0 0016799999999
Q ss_pred HHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 392 EDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 392 E~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
|.+++.+ ..+ .+.+++||.+.++
T Consensus 195 ~~~~~~la~e~~~~~-~v~~v~Pg~v~t~ 222 (279)
T 3ctm_A 195 THLAKSLAIEWAPFA-RVNTISPGYIDTD 222 (279)
T ss_dssp HHHHHHHHHHTTTTC-EEEEEEECSBSST
T ss_pred HHHHHHHHHHhcccC-CEEEEeccCCccc
Confidence 9998775 246 8899999888754
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.18 E-value=3e-10 Score=118.14 Aligned_cols=166 Identities=20% Similarity=0.206 Sum_probs=112.7
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+..|..+ .+.|.. .+.+|+++.|........+..+++..
T Consensus 2 ~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~------------ 50 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGI----SEKLAA---------------DGFDIAVADLPQQEEQAAETIKLIEA------------ 50 (258)
T ss_dssp CCEEEEETTTSHHHHHH----HHHHHH---------------HTCEEEEEECGGGHHHHHHHHHHHHT------------
T ss_pred CCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCcchHHHHHHHHHHHh------------
Confidence 58999999544443332 233322 15678888886542112222222211
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
...++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.++++++
T Consensus 51 -~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 123 (258)
T 3a28_C 51 -ADQKAVFVGLDVTDK------ANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAA 123 (258)
T ss_dssp -TTCCEEEEECCTTCH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred -cCCcEEEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHH
Confidence 123688999999987 77777665 68999999997532 1345678999999999999887
Q ss_pred HHc---cCC-ceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 320 KEM---KQL-KSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 320 ~~~---~~~-~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
... .+. .++|++||...+.... ....|+.||...|.+.
T Consensus 124 ~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~ 165 (258)
T 3a28_C 124 SRKFDELGVKGKIINAASIAAIQGFP--------------------------------------ILSAYSTTKFAVRGLT 165 (258)
T ss_dssp HHHHHHHTCCCEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCcEEEEECcchhccCCC--------------------------------------CchhHHHHHHHHHHHH
Confidence 542 245 7999999986543210 1168999999999988
Q ss_pred HHc-----CCCCcEEEecCCeEEec
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.. ..|+.+.+++||.+..+
T Consensus 166 ~~la~e~~~~gi~vn~v~PG~v~t~ 190 (258)
T 3a28_C 166 QAAAQELAPKGHTVNAYAPGIVGTG 190 (258)
T ss_dssp HHHHHHHGGGTCEEEEEEECCBCSH
T ss_pred HHHHHHHHhhCeEEEEEECCccCCh
Confidence 765 34899999999988754
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.18 E-value=2.1e-10 Score=120.24 Aligned_cols=168 Identities=18% Similarity=0.155 Sum_probs=113.6
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... ..+.+.+..+
T Consensus 26 ~l~~k~vlITGas~gIG~~l----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~--------- 75 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEI----AKTLAS---------------MGLKVWINYRSNAE--VADALKNELE--------- 75 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESSCHH--HHHHHHHHHH---------
T ss_pred ccCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCCHH--HHHHHHHHHH---------
Confidence 35689999999544333322 333332 25678888885321 2222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Ll 316 (782)
....++.++.+|++++ +++.++++ .+|++||+||..... +.++..+++|+.|+.+++
T Consensus 76 ---~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 146 (271)
T 4iin_A 76 ---EKGYKAAVIKFDAASE------SDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGC 146 (271)
T ss_dssp ---HTTCCEEEEECCTTCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---hcCCceEEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHH
Confidence 1124788999999987 77776665 689999999975321 456678999999999988
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+... .+..++|++||........ ....|+.||...|.
T Consensus 147 ~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~ 188 (271)
T 4iin_A 147 REALKVMSKSRFGSVVNVASIIGERGNM--------------------------------------GQTNYSASKGGMIA 188 (271)
T ss_dssp HHHHHHHHHHTCEEEEEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCEEEEEechhhcCCCC--------------------------------------CchHhHHHHHHHHH
Confidence 876432 2567999999986542210 11689999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..++.+..++||.|..+
T Consensus 189 ~~~~la~e~~~~gi~v~~v~PG~v~T~ 215 (271)
T 4iin_A 189 MSKSFAYEGALRNIRFNSVTPGFIETD 215 (271)
T ss_dssp HHHHHHHHHHTTTEEEEEEEECSBCCC
T ss_pred HHHHHHHHHHHhCcEEEEEEeCcccCC
Confidence 88765 35899999999888754
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.7e-10 Score=123.99 Aligned_cols=169 Identities=15% Similarity=0.141 Sum_probs=110.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+++|..+ .+.|.. .+.+|++..|.... ..+...++...
T Consensus 6 l~~k~vlVTGas~gIG~~l----a~~l~~---------------~G~~Vv~~~r~~~~--~~~~~~~l~~~--------- 55 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGL----VRQLLN---------------QGCKVAIADIRQDS--IDKALATLEAE--------- 55 (319)
T ss_dssp CTTCEEEEETTTSTHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHHH---------
T ss_pred CCCCEEEEcCCchHHHHHH----HHHHHH---------------CCCEEEEEECCHHH--HHHHHHHHHhc---------
Confidence 4578999999654444333 233332 25788888886432 22222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
....++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 56 --~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 127 (319)
T 3ioy_A 56 --GSGPEVMGVQLDVASR------EGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVT 127 (319)
T ss_dssp --TCGGGEEEEECCTTCH------HHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred --CCCCeEEEEECCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 0113789999999997 77777765 56999999996432 14466789999999999999
Q ss_pred HHHHcc---------CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHH
Q psy16243 318 MAKEMK---------QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTK 388 (782)
Q Consensus 318 ~a~~~~---------~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK 388 (782)
++...- +-.++|++||...+.... ....|+.||
T Consensus 128 ~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~--------------------------------------~~~~Y~aSK 169 (319)
T 3ioy_A 128 TFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG--------------------------------------SPGIYNTTK 169 (319)
T ss_dssp HHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS--------------------------------------SSHHHHHHH
T ss_pred HHHHHHHHhhhccCCCCcEEEEecccccccCCC--------------------------------------CCHHHHHHH
Confidence 875431 245799999987654211 116799999
Q ss_pred H----HHHHHHHHc-CCCCcEEEecCCeEEecc
Q psy16243 389 Q----VAEDMVRRG-GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 389 ~----~aE~ll~~~-~~glp~~IvRp~~v~G~~ 416 (782)
. ++|.+..++ ..|+.+++++||.|.++.
T Consensus 170 aal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 202 (319)
T 3ioy_A 170 FAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI 202 (319)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEECCCCBC---
T ss_pred HHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCc
Confidence 9 555554444 458999999999998753
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.3e-10 Score=123.26 Aligned_cols=168 Identities=16% Similarity=0.189 Sum_probs=113.2
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhh--HHHHHHHhhcccccccccc
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKA--LLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~--~~erl~~~~~~~~f~~l~~ 250 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|++..|...+.. ..+.+.+...
T Consensus 4 ~~k~vlVTGas~GIG~ai----a~~L~~---------------~G~~V~~~~r~~~~r~~~~~~~l~~~~~--------- 55 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLT----AEALAG---------------AGHRVYASMRDIVGRNASNVEAIAGFAR--------- 55 (324)
T ss_dssp -CCEEEESSCSSHHHHHH----HHHHHH---------------TTCEEEEEESCTTTTTHHHHHHHHHHHH---------
T ss_pred CCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEecCcccccCHHHHHHHHHHHH---------
Confidence 368999999544443332 333432 2678888888532222 2222222111
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
....++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.+++
T Consensus 56 ---~~~~~~~~~~~Dvtd~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 126 (324)
T 3u9l_A 56 ---DNDVDLRTLELDVQSQ------VSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVN 126 (324)
T ss_dssp ---HHTCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHH
T ss_pred ---hcCCcEEEEEeecCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 1124788999999987 77777776 78999999996432 2345678899999999999
Q ss_pred HHH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+++ ++. +..++|++||........ +....|+.||...|
T Consensus 127 ~a~lp~m~~~-~~g~iV~isS~~~~~~~~-------------------------------------~~~~~Y~asKaa~~ 168 (324)
T 3u9l_A 127 RAALPHMRRQ-KHGLLIWISSSSSAGGTP-------------------------------------PYLAPYFAAKAAMD 168 (324)
T ss_dssp HHHHHHHHHH-TCEEEEEECCGGGTSCCC-------------------------------------SSCHHHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCEEEEEecchhccCCC-------------------------------------CcchhHHHHHHHHH
Confidence 997 443 668999999987653210 01157999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+.+++++||.+.++
T Consensus 169 ~~~~~la~el~~~gI~v~~v~PG~v~t~ 196 (324)
T 3u9l_A 169 AIAVQYARELSRWGIETSIIVPGAFTSG 196 (324)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECCC---
T ss_pred HHHHHHHHHhhhhCcEEEEEECCccccC
Confidence 998776 35899999999999764
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.17 E-value=1e-10 Score=123.58 Aligned_cols=125 Identities=11% Similarity=0.048 Sum_probs=91.0
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----hhhHHHHHHhhHHHHHHHHHHHHHc-c
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----DAHLKVAVSINLRATKALLEMAKEM-K 323 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----~~~~~~~~~~Nv~gt~~Lle~a~~~-~ 323 (782)
.++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 71 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 144 (287)
T 3pxx_A 71 RKAYTAEVDVRDR------AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLT 144 (287)
T ss_dssp SCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC
T ss_pred CceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh
Confidence 4789999999987 77776665 68999999997543 2556788999999999999998654 2
Q ss_pred CCceEEEEecceeccCC--CcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---
Q psy16243 324 QLKSFVHVSTAYSNCRQ--PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--- 398 (782)
Q Consensus 324 ~~~~fV~vST~~v~~~~--~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--- 398 (782)
+-.++|++||.+.+... ....|.. + .+....|+.||...+.+.+..
T Consensus 145 ~~g~iv~isS~~~~~~~~~~~~~~~~--------------------------~---~~~~~~Y~asK~a~~~~~~~la~e 195 (287)
T 3pxx_A 145 SGASIITTGSVAGLIAAAQPPGAGGP--------------------------Q---GPGGAGYSYAKQLVDSYTLQLAAQ 195 (287)
T ss_dssp TTCEEEEECCHHHHHHHHCCC-------------------------------C---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEEeccchhccccccccccccc--------------------------C---CCccchHHHHHHHHHHHHHHHHHH
Confidence 34589999998765321 1111110 0 000157999999999988765
Q ss_pred --CCCCcEEEecCCeEEecc
Q psy16243 399 --GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 399 --~~glp~~IvRp~~v~G~~ 416 (782)
..|+.+..++||.|..+.
T Consensus 196 ~~~~gi~vn~v~PG~v~T~~ 215 (287)
T 3pxx_A 196 LAPQSIRANVIHPTNVNTDM 215 (287)
T ss_dssp HGGGTCEEEEEEESSBSSTT
T ss_pred HhhcCcEEEEEecCcccccc
Confidence 348999999999998754
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.2e-10 Score=125.30 Aligned_cols=112 Identities=16% Similarity=0.207 Sum_probs=83.8
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+..+++++...
T Consensus 86 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 159 (322)
T 3qlj_A 86 GEAVADGSNVADW------DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAY 159 (322)
T ss_dssp CEEEEECCCTTSH------HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4688999999997 77777665 68999999997542 2445678999999999999986532
Q ss_pred ----cC-----CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 323 ----KQ-----LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 323 ----~~-----~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+. -.++|++||...+.... ....|+.||...+.
T Consensus 160 ~~~~~~~~~~~~g~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~ 201 (322)
T 3qlj_A 160 WRGLSKAGKAVDGRIINTSSGAGLQGSV--------------------------------------GQGNYSAAKAGIAT 201 (322)
T ss_dssp HHHHHHTTCCCCEEEEEECCHHHHHCBT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHccccCCCCCcEEEEEcCHHHccCCC--------------------------------------CCccHHHHHHHHHH
Confidence 00 14899999986542210 11679999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEE
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVI 413 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~ 413 (782)
+.+.. ..|+.+..++|| +.
T Consensus 202 l~~~la~e~~~~gI~vn~v~PG-~~ 225 (322)
T 3qlj_A 202 LTLVGAAEMGRYGVTVNAIAPS-AR 225 (322)
T ss_dssp HHHHHHHHHGGGTEEEEEEEEC-TT
T ss_pred HHHHHHHHhcccCcEEEEecCC-CC
Confidence 88765 258999999998 53
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=2.3e-10 Score=119.13 Aligned_cols=168 Identities=17% Similarity=0.177 Sum_probs=111.9
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ...+..+++..
T Consensus 3 ~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~-~~~~~~~~~~~----------- 51 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGI----ATALAA---------------QGADIVLNGFGDAA-EIEKVRAGLAA----------- 51 (260)
T ss_dssp TTCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEECCSCHH-HHHHHHHHHHH-----------
T ss_pred CCCEEEEeCCCcHHHHHH----HHHHHH---------------cCCEEEEEeCCcch-HHHHHHHHHHh-----------
Confidence 478999999544433332 233322 25678888776431 01111222110
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
....++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.++++.
T Consensus 52 -~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 124 (260)
T 1x1t_A 52 -QHGVKVLYDGADLSKG------EAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAA 124 (260)
T ss_dssp -HHTSCEEEECCCTTSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred -ccCCcEEEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0013678899999987 77777665 68999999996532 244567899999999999888
Q ss_pred HHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+... .+..++|++||...+.... ....|+.||...|.+.
T Consensus 125 ~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~ 166 (260)
T 1x1t_A 125 ALPHMKKQGFGRIINIASAHGLVASA--------------------------------------NKSAYVAAKHGVVGFT 166 (260)
T ss_dssp HHHHHHHHTCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEECcHHhCcCCC--------------------------------------CCchHHHHHHHHHHHH
Confidence 7431 2568999999987643210 1168999999999988
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.. ..|+++.+++||.+.++.
T Consensus 167 ~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T 1x1t_A 167 KVTALETAGQGITANAICPGWVRTPL 192 (260)
T ss_dssp HHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred HHHHHHhccCCEEEEEEeecCccCch
Confidence 765 358999999999998753
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=4.7e-10 Score=116.46 Aligned_cols=161 Identities=19% Similarity=0.153 Sum_probs=110.0
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++
T Consensus 4 ~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~------------- 49 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEA----ARQAVA---------------AGARVVLADVLDE--EGAATAREL------------- 49 (254)
T ss_dssp CCSEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHTT-------------
T ss_pred CCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHh-------------
Confidence 478999999544443332 233322 2567888888532 111111111
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
..++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+..+.+.
T Consensus 50 ---~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 120 (254)
T 1hdc_A 50 ---GDAARYQHLDVTIE------EDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKT 120 (254)
T ss_dssp ---GGGEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHH
T ss_pred ---CCceeEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHH
Confidence 13678899999987 77777766 78999999997532 134567889999999855544
Q ss_pred ----HHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 319 ----AKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 319 ----a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+++. +..++|++||...+.... ....|+.||...|.+
T Consensus 121 ~~~~~~~~-~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~ 161 (254)
T 1hdc_A 121 VIPAMKDA-GGGSIVNISSAAGLMGLA--------------------------------------LTSSYGASKWGVRGL 161 (254)
T ss_dssp HHHHHHHH-TCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHc-CCCEEEEECchhhccCCC--------------------------------------CchhHHHHHHHHHHH
Confidence 4443 568999999987653210 116899999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+.++|||.+.++
T Consensus 162 ~~~la~e~~~~gi~v~~v~Pg~v~t~ 187 (254)
T 1hdc_A 162 SKLAAVELGTDRIRVNSVHPGMTYTP 187 (254)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHhhhcCeEEEEEecccCcCc
Confidence 8765 35899999999999875
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=1.1e-10 Score=121.91 Aligned_cols=167 Identities=17% Similarity=0.199 Sum_probs=113.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|... ...+..+++..
T Consensus 9 l~~k~vlVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~~~---------- 57 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTL----ARRCAE---------------QGADLVLAARTVE--RLEDVAKQVTD---------- 57 (264)
T ss_dssp TTTCEEEEESCCTTHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHHH----------
T ss_pred cCCcEEEEECCCcHHHHHH----HHHHHH---------------CcCEEEEEeCCHH--HHHHHHHHHHh----------
Confidence 5689999999644433332 233332 2567888888532 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Ll 316 (782)
.-.++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.+++
T Consensus 58 ---~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~ 128 (264)
T 3ucx_A 58 ---TGRRALSVGTDITDD------AQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLI 128 (264)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---cCCcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHH
Confidence 124788999999998 77777665 57999999986421 1445678999999999999
Q ss_pred HHHHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 317 EMAKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 317 e~a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+.+... ++-.++|++||........ ....|+.||...+.+
T Consensus 129 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~ 170 (264)
T 3ucx_A 129 QGFTPALEESKGAVVNVNSMVVRHSQA--------------------------------------KYGAYKMAKSALLAM 170 (264)
T ss_dssp HHTHHHHHHHTCEEEEECCGGGGCCCT--------------------------------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECcchhccCCC--------------------------------------ccHHHHHHHHHHHHH
Confidence 886432 1126999999986543210 115799999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEecc
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+.. ..|+.+..++||.|.++.
T Consensus 171 ~~~la~e~~~~gi~vn~v~PG~v~t~~ 197 (264)
T 3ucx_A 171 SQTLATELGEKGIRVNSVLPGYIWGGT 197 (264)
T ss_dssp HHHHHHHHHTTTCEEEEEEESSCBSHH
T ss_pred HHHHHHHhCccCeEEEEEecCcccccc
Confidence 8765 358999999999998753
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.16 E-value=2.2e-10 Score=119.23 Aligned_cols=164 Identities=16% Similarity=0.106 Sum_probs=106.6
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|... +.+|+++.|.... .+.+.+.
T Consensus 7 l~~k~vlITGas~gIG~~~----a~~l~~~---------------G~~V~~~~r~~~~---~~~~~~~------------ 52 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGM----AKRFAKG---------------GAKVVIVDRDKAG---AERVAGE------------ 52 (261)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHHT---------------TCEEEEEESCHHH---HHHHHHH------------
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHHC---------------CCEEEEEcCCHHH---HHHHHHH------------
Confidence 4578999999544333322 3333322 5678888886431 1222111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.+++
T Consensus 53 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 123 (261)
T 3n74_A 53 ---IGDAALAVAADISKE------ADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMT 123 (261)
T ss_dssp ---HCTTEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHH
T ss_pred ---hCCceEEEEecCCCH------HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence 123688999999987 77777665 67999999997541 2445678899999999988
Q ss_pred HHHHHc----c---CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHH
Q psy16243 317 EMAKEM----K---QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQ 389 (782)
Q Consensus 317 e~a~~~----~---~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~ 389 (782)
+.+... + +..++|++||...+... +....|+.||+
T Consensus 124 ~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------------------------------~~~~~Y~asKa 165 (261)
T 3n74_A 124 SKLIPHFKENGAKGQECVILNVASTGAGRPR--------------------------------------PNLAWYNATKG 165 (261)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCTTTTSCC--------------------------------------TTCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCeEEEEeCchhhcCCC--------------------------------------CCccHHHHHHH
Confidence 876432 0 13469999998654221 01157999999
Q ss_pred HHHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 390 VAEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 390 ~aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
..+.+.+.. ..++.+..++||.+.++.
T Consensus 166 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 197 (261)
T 3n74_A 166 WVVSVTKALAIELAPAKIRVVALNPVAGETPL 197 (261)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEEC------
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEecCcccChh
Confidence 999988765 248999999999988753
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=6.5e-10 Score=116.59 Aligned_cols=164 Identities=20% Similarity=0.200 Sum_probs=115.1
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+..|..+ .+.|.. .+.+|++..|.... ..+..+++
T Consensus 8 ~l~~k~vlVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~----------- 55 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLET----SRVLAR---------------AGARVVLADLPETD--LAGAAASV----------- 55 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEECTTSC--HHHHHHHH-----------
T ss_pred CCCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEcCCHHH--HHHHHHHh-----------
Confidence 35589999999544333322 233322 25678888876432 22222221
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc---------hhhHHHHHHhhHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF---------DAHLKVAVSINLRATKA 314 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f---------~~~~~~~~~~Nv~gt~~ 314 (782)
..++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.+
T Consensus 56 -----~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~ 124 (271)
T 3tzq_B 56 -----GRGAVHHVVDLTNE------VSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124 (271)
T ss_dssp -----CTTCEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred -----CCCeEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHH
Confidence 13678889999987 77777776 68999999997522 13456789999999999
Q ss_pred HHHHH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 315 LLEMA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 315 Lle~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
+++++ ++. +..++|++||...+.... ....|+.||..
T Consensus 125 l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa 165 (271)
T 3tzq_B 125 MCKYAIPRLISA-GGGAIVNISSATAHAAYD--------------------------------------MSTAYACTKAA 165 (271)
T ss_dssp HHHHHHHHHHHT-TCEEEEEECCGGGTSBCS--------------------------------------SCHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCCEEEEECCHHHcCCCC--------------------------------------CChHHHHHHHH
Confidence 99987 443 567999999987653210 11689999999
Q ss_pred HHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 391 AEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 391 aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.|.+.+.. ..|+++.+++||.|.++.
T Consensus 166 ~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 196 (271)
T 3tzq_B 166 IETLTRYVATQYGRHGVRCNAIAPGLVRTPR 196 (271)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred HHHHHHHHHHHHhhcCEEEEEEEeCCCcCcc
Confidence 99988765 258999999999998753
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=2.8e-10 Score=118.49 Aligned_cols=115 Identities=17% Similarity=0.132 Sum_probs=87.1
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 54 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 127 (258)
T 3oid_A 54 VKVLVVKANVGQP------AKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKL 127 (258)
T ss_dssp CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4788999999998 77777665 45999999986322 1345678999999999999887432
Q ss_pred ---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 ---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 ---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+..++|++||...+... +....|+.||+..+.+.+..
T Consensus 128 m~~~~~g~iv~isS~~~~~~~--------------------------------------~~~~~Y~asKaa~~~l~~~la 169 (258)
T 3oid_A 128 MEKNGGGHIVSISSLGSIRYL--------------------------------------ENYTTVGVSKAALEALTRYLA 169 (258)
T ss_dssp HHTTTCEEEEEEEEGGGTSBC--------------------------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEECchhhCCCC--------------------------------------CCcHHHHHHHHHHHHHHHHHH
Confidence 245699999998654321 01168999999999998765
Q ss_pred ----CCCCcEEEecCCeEEec
Q psy16243 399 ----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G~ 415 (782)
..|+.+..++||.|..+
T Consensus 170 ~e~~~~gi~vn~v~PG~v~T~ 190 (258)
T 3oid_A 170 VELSPKQIIVNAVSGGAIDTD 190 (258)
T ss_dssp HHTGGGTEEEEEEEECCBCSG
T ss_pred HHHhhcCcEEEEEeeCCCcCh
Confidence 24899999999988764
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.2e-10 Score=122.09 Aligned_cols=160 Identities=14% Similarity=0.190 Sum_probs=110.7
Q ss_pred cCcccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccc
Q psy16243 168 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDP 247 (782)
Q Consensus 168 ~~p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~ 247 (782)
..+.+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.....
T Consensus 8 ~~~~~~~k~vlVTGas~GIG~ai----a~~l~~---------------~G~~V~~~~r~~~~~----------------- 51 (269)
T 3vtz_A 8 HMEEFTDKVAIVTGGSSGIGLAV----VDALVR---------------YGAKVVSVSLDEKSD----------------- 51 (269)
T ss_dssp --CTTTTCEEEESSTTSHHHHHH----HHHHHH---------------TTCEEEEEESCC--C-----------------
T ss_pred cccCCCCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCchhc-----------------
Confidence 34557799999999644444333 233322 256777777753211
Q ss_pred ccccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHH
Q psy16243 248 MRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATK 313 (782)
Q Consensus 248 l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~ 313 (782)
...+..+.+|++++ ++++.+++ .+|++||+||..... +.++..+++|+.|+.
T Consensus 52 --------~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~ 117 (269)
T 3vtz_A 52 --------VNVSDHFKIDVTNE------EEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSY 117 (269)
T ss_dssp --------TTSSEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHH
T ss_pred --------cCceeEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence 12456788999987 77777665 689999999975321 345678899999999
Q ss_pred HHHHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 314 ALLEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 314 ~Lle~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
.+++++... .+..++|++||...+.... ....|+.||..
T Consensus 118 ~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa 159 (269)
T 3vtz_A 118 LMAKYTIPVMLAIGHGSIINIASVQSYAATK--------------------------------------NAAAYVTSKHA 159 (269)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECCGGGTSBCT--------------------------------------TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEECchhhccCCC--------------------------------------CChhHHHHHHH
Confidence 999886431 2567999999987654211 11689999999
Q ss_pred HHHHHHHc----CCCCcEEEecCCeEEec
Q psy16243 391 AEDMVRRG----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 391 aE~ll~~~----~~glp~~IvRp~~v~G~ 415 (782)
.|.+.+.. ..++.+..++||.|.++
T Consensus 160 ~~~l~~~la~e~~~~i~vn~v~PG~v~T~ 188 (269)
T 3vtz_A 160 LLGLTRSVAIDYAPKIRCNAVCPGTIMTP 188 (269)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHhcCCCEEEEEEECCCcCc
Confidence 99988765 34899999999988865
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=3.5e-10 Score=118.30 Aligned_cols=168 Identities=14% Similarity=0.115 Sum_probs=110.6
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
...+|+++|||..+..|..+ .+.|... +.+|+++.+... ....+..+++..
T Consensus 23 ~l~~k~vlVTGas~gIG~~l----a~~l~~~---------------G~~v~i~~~r~~-~~~~~~~~~l~~--------- 73 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAI----ARQLAAD---------------GFNIGVHYHRDA-AGAQETLNAIVA--------- 73 (267)
T ss_dssp --CCCEEEETTTTSHHHHHH----HHHHHHT---------------TCEEEEEESSCH-HHHHHHHHHHHH---------
T ss_pred ccCCCEEEEECCCChHHHHH----HHHHHHC---------------CCEEEEEeCCch-HHHHHHHHHHHh---------
Confidence 35679999999544444333 2333222 566766554322 122233333221
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.+++
T Consensus 74 ----~~~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 143 (267)
T 4iiu_A 74 ----NGGNGRLLSFDVANR------EQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVI 143 (267)
T ss_dssp ----TTCCEEEEECCTTCH------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ----cCCceEEEEecCCCH------HHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHH
Confidence 124788999999987 77777665 68999999997532 2456678999999999999
Q ss_pred HHHHH----ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMAKE----MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a~~----~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+.+.. ..+..++|++||...+.... ....|+.||...+
T Consensus 144 ~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~ 185 (267)
T 4iiu_A 144 QPCIMPMIGARQGGRIITLSSVSGVMGNR--------------------------------------GQVNYSAAKAGII 185 (267)
T ss_dssp HHHHHHHHHHTSCEEEEEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEEEcchHhccCCC--------------------------------------CCchhHHHHHHHH
Confidence 98631 23568999999976542210 1168999999777
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+++.+++||.|.++
T Consensus 186 ~~~~~la~e~~~~gi~v~~v~PG~v~t~ 213 (267)
T 4iiu_A 186 GATKALAIELAKRKITVNCIAPGLIDTG 213 (267)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCST
T ss_pred HHHHHHHHHHhhcCeEEEEEEEeeecCC
Confidence 776554 34899999999998764
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=8.5e-10 Score=116.23 Aligned_cols=168 Identities=15% Similarity=0.143 Sum_probs=114.8
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.-|.|. +..+.|.. .+.+|+++.|... .+.++++..
T Consensus 23 ~l~~k~vlVTGasg~~GIG~--~ia~~l~~---------------~G~~V~~~~r~~~----~~~~~~l~~--------- 72 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAY--GIAKAMHR---------------EGAELAFTYVGQF----KDRVEKLCA--------- 72 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHH--HHHHHHHH---------------TTCEEEEEECTTC----HHHHHHHHG---------
T ss_pred ccCCCEEEEECCCCCCCHHH--HHHHHHHH---------------cCCEEEEeeCchH----HHHHHHHHH---------
Confidence 45689999999654423332 22333332 2567888888651 223333221
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc------------hhhHHHHHHhhHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF------------DAHLKVAVSINLRA 311 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f------------~~~~~~~~~~Nv~g 311 (782)
...++.++.+|++++ ++++++++ .+|++||+||.... .+.+...+++|+.|
T Consensus 73 ----~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~ 142 (280)
T 3nrc_A 73 ----EFNPAAVLPCDVISD------QEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYS 142 (280)
T ss_dssp ----GGCCSEEEECCTTCH------HHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHH
T ss_pred ----hcCCceEEEeecCCH------HHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHH
Confidence 113578999999987 77777665 46999999997542 23455688999999
Q ss_pred HHHHHHHHHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHH
Q psy16243 312 TKALLEMAKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQ 389 (782)
Q Consensus 312 t~~Lle~a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~ 389 (782)
+.++++++... ++-.++|++||...+.... ....|+.||.
T Consensus 143 ~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKa 184 (280)
T 3nrc_A 143 FAALAKEGRSMMKNRNASMVALTYIGAEKAMP--------------------------------------SYNTMGVAKA 184 (280)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEEECGGGTSCCT--------------------------------------TTHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeccccccCCC--------------------------------------CchhhHHHHH
Confidence 99999987653 1346899999986543210 1168999999
Q ss_pred HHHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 390 VAEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 390 ~aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
..+.+.+.. ..|+.+.+++||.|..+.
T Consensus 185 al~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 216 (280)
T 3nrc_A 185 SLEATVRYTALALGEDGIKVNAVSAGPIKTLA 216 (280)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCCCCSG
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEeeccccchh
Confidence 999988765 358999999999988653
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.16 E-value=2.6e-10 Score=118.60 Aligned_cols=164 Identities=19% Similarity=0.163 Sum_probs=110.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+.+|..+ .+.|.. .+.+|+++.|..... .+..++
T Consensus 5 l~~k~~lVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~~~--~~~~~~------------- 50 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAV----TRMLAQ---------------EGATVLGLDLKPPAG--EEPAAE------------- 50 (257)
T ss_dssp CTTCEEEEESTTSHHHHHH----HHHHHH---------------TTCEEEEEESSCC-----------------------
T ss_pred cCCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEeCChHHH--HHHHHH-------------
Confidence 3578999999644443332 233322 256788888864321 111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----------hhhHHHHHHhhHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----------DAHLKVAVSINLRATK 313 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~ 313 (782)
...++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.
T Consensus 51 ---~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~ 121 (257)
T 3tpc_A 51 ---LGAAVRFRNADVTNE------ADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTF 121 (257)
T ss_dssp -------CEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHH
T ss_pred ---hCCceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHH
Confidence 113688999999997 77777766 78999999997531 2456678999999999
Q ss_pred HHHHHHHHc---------cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccH
Q psy16243 314 ALLEMAKEM---------KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTY 384 (782)
Q Consensus 314 ~Lle~a~~~---------~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y 384 (782)
++++++... ++..++|++||...+.... ....|
T Consensus 122 ~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y 163 (257)
T 3tpc_A 122 NMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI--------------------------------------GQAAY 163 (257)
T ss_dssp HHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT--------------------------------------TCHHH
T ss_pred HHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC--------------------------------------CCcch
Confidence 999987653 1346799999986543210 11689
Q ss_pred HHHHHHHHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 385 ALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 385 ~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.||...+.+.+.. ..|+++.+++||.|.++.
T Consensus 164 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 200 (257)
T 3tpc_A 164 AASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPM 200 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChh
Confidence 99999999887665 358999999999988653
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.15 E-value=4.1e-10 Score=118.78 Aligned_cols=169 Identities=18% Similarity=0.248 Sum_probs=107.9
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|... ....+...++..
T Consensus 26 ~~~~k~~lVTGas~GIG~ai----a~~la~---------------~G~~V~~~~~~~~-~~~~~~~~~~~~--------- 76 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGI----ARALAA---------------SGFDIAITGIGDA-EGVAPVIAELSG--------- 76 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCCH-HHHHHHHHHHHH---------
T ss_pred ccCCCEEEEecCCCHHHHHH----HHHHHH---------------CCCeEEEEeCCCH-HHHHHHHHHHHh---------
Confidence 35689999999644444333 233332 2567887775322 112222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC---------chhhHHHHHHhhHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR---------FDAHLKVAVSINLRATKA 314 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~---------f~~~~~~~~~~Nv~gt~~ 314 (782)
.-.++.++.+|++++ ++++++++ .+|++||+||... -.+.++..+++|+.|+.+
T Consensus 77 ----~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~ 146 (280)
T 4da9_A 77 ----LGARVIFLRADLADL------SSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVF 146 (280)
T ss_dssp ----TTCCEEEEECCTTSG------GGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHH
T ss_pred ----cCCcEEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHH
Confidence 124788999999998 67776665 6899999999731 124556788999999999
Q ss_pred HHHHHHHc---cC---CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHH
Q psy16243 315 LLEMAKEM---KQ---LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTK 388 (782)
Q Consensus 315 Lle~a~~~---~~---~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK 388 (782)
+++++... .+ ..++|++||........ ....|+.||
T Consensus 147 l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asK 188 (280)
T 4da9_A 147 FTQAVLKAMLASDARASRSIINITSVSAVMTSP--------------------------------------ERLDYCMSK 188 (280)
T ss_dssp HHHHHHHHHHHHCCCCCEEEEEECCC---------------------------------------------CCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEcchhhccCCC--------------------------------------CccHHHHHH
Confidence 98886432 11 45899999986542210 115799999
Q ss_pred HHHHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 389 QVAEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 389 ~~aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
...+.+.+.. ..|+++..++||.|..+.
T Consensus 189 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 221 (280)
T 4da9_A 189 AGLAAFSQGLALRLAETGIAVFEVRPGIIRSDM 221 (280)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred HHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCc
Confidence 9999988765 358999999999887653
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.15 E-value=3.6e-10 Score=117.73 Aligned_cols=168 Identities=16% Similarity=0.119 Sum_probs=112.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++... +
T Consensus 5 l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~~--~------ 55 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFAS----ALELAR---------------NGARLLLFSRNREK--LEAAASRIASL--V------ 55 (260)
T ss_dssp CTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHHH--S------
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHhc--C------
Confidence 3478999999544443332 233322 25678888886321 12222221100 0
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
+ ..++.++.+|++++ ++++.+++ ++|++||+|+.... .+.++..+++|+.|+.++.+.
T Consensus 56 -~--~~~~~~~~~D~~~~------~~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 126 (260)
T 2z1n_A 56 -S--GAQVDIVAGDIREP------GDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRR 126 (260)
T ss_dssp -T--TCCEEEEECCTTCH------HHHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHH
T ss_pred -C--CCeEEEEEccCCCH------HHHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 0 12688899999987 77777776 58999999996432 235667899999999777666
Q ss_pred HH----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 319 AK----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 319 a~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+. +. +..++|++||..++.... ....|+.||...+.+
T Consensus 127 ~~~~~~~~-~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~ 167 (260)
T 2z1n_A 127 AAEQMVEK-GWGRMVYIGSVTLLRPWQ--------------------------------------DLALSNIMRLPVIGV 167 (260)
T ss_dssp HHHHHHHH-TCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHTHHHHHH
T ss_pred HHHHHHhc-CCcEEEEECchhhcCCCC--------------------------------------CCchhHHHHHHHHHH
Confidence 43 33 568999999987653210 016799999999988
Q ss_pred HHHc-----CCCCcEEEecCCeEEecc
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+.. ..|+++.++|||.+.++.
T Consensus 168 ~~~la~e~~~~gi~v~~v~Pg~v~t~~ 194 (260)
T 2z1n_A 168 VRTLALELAPHGVTVNAVLPSLILTDR 194 (260)
T ss_dssp HHHHHHHHGGGTEEEEEEEECHHHHCC
T ss_pred HHHHHHHHhhhCeEEEEEEECCcccch
Confidence 8765 348999999999998754
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=3.1e-10 Score=119.19 Aligned_cols=171 Identities=17% Similarity=0.163 Sum_probs=109.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeec-ccchhhHHHHHHHhhcccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSIN-LRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR-~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.| ... ...+..+++...
T Consensus 9 ~~~k~~lVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~~~-------- 59 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSI----AVRLHQ---------------QGFRVVVHYRHSEG--AAQRLVAELNAA-------- 59 (276)
T ss_dssp --CCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESSCHH--HHHHHHHHHHHH--------
T ss_pred cCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCChH--HHHHHHHHHHHh--------
Confidence 3578999999544433332 233322 2567888888 432 112222221110
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch------------------hhHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD------------------AHLKVAV 305 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~------------------~~~~~~~ 305 (782)
...++.++.+|++++.- ..++++.+++ .+|++||+||..... +.++..+
T Consensus 60 ----~~~~~~~~~~Dl~~~~~--~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (276)
T 1mxh_A 60 ----RAGSAVLCKGDLSLSSS--LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELF 133 (276)
T ss_dssp ----STTCEEEEECCCSSSTT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHH
T ss_pred ----cCCceEEEeccCCCccc--cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHH
Confidence 01368889999998610 0034444443 689999999964321 4556789
Q ss_pred HhhHHHHHHHHHHHHHc--cCC------ceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCcc
Q psy16243 306 SINLRATKALLEMAKEM--KQL------KSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIV 377 (782)
Q Consensus 306 ~~Nv~gt~~Lle~a~~~--~~~------~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~ 377 (782)
++|+.|+.++++++... .+. .++|++||...+....
T Consensus 134 ~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------------------------------ 177 (276)
T 1mxh_A 134 GSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLP------------------------------------ 177 (276)
T ss_dssp HHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSCCT------------------------------------
T ss_pred HhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCCCC------------------------------------
Confidence 99999999999998763 133 7899999987653210
Q ss_pred CCCCccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 378 DYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 378 ~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
....|+.||...+.+.+.. ..|+.+.+++||.+.++
T Consensus 178 --~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~ 218 (276)
T 1mxh_A 178 --GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218 (276)
T ss_dssp --TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred --CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence 0167999999999988765 34899999999999876
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2.2e-10 Score=119.28 Aligned_cols=163 Identities=16% Similarity=0.143 Sum_probs=113.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++
T Consensus 10 ~~~k~vlVTGasggiG~~~----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~------------ 56 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLAT----AERLVG---------------QGASAVLLDLPNSG--GEAQAKKL------------ 56 (265)
T ss_dssp CTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEECTTSS--HHHHHHHH------------
T ss_pred CCCCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEeCCcHh--HHHHHHHh------------
Confidence 4578999999544444332 233322 25678888886432 12222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------------hhhHHHHHHhhHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------------DAHLKVAVSINLRA 311 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------------~~~~~~~~~~Nv~g 311 (782)
..++.++.+|++++ ++++++++ .+|+|||+||.... .+.++..+++|+.|
T Consensus 57 ----~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~ 126 (265)
T 2o23_A 57 ----GNNCVFAPADVTSE------KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 126 (265)
T ss_dssp ----CTTEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHH
T ss_pred ----CCceEEEEcCCCCH------HHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHH
Confidence 13688899999987 77777776 78999999997532 23466788999999
Q ss_pred HHHHHHHHHHc---c------CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCc
Q psy16243 312 TKALLEMAKEM---K------QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPN 382 (782)
Q Consensus 312 t~~Lle~a~~~---~------~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn 382 (782)
+.++++++... . +..++|++||.+++.... ...
T Consensus 127 ~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------------------------------~~~ 168 (265)
T 2o23_A 127 TFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV--------------------------------------GQA 168 (265)
T ss_dssp HHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT--------------------------------------TCH
T ss_pred HHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCC--------------------------------------CCc
Confidence 99999987653 1 457899999987653210 116
Q ss_pred cHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 383 TYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 383 ~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.|+.||...|.+.+.. ..++++.+++||.+.++
T Consensus 169 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 206 (265)
T 2o23_A 169 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP 206 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCc
Confidence 8999999988887765 34899999999988764
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=8.7e-10 Score=115.10 Aligned_cols=170 Identities=15% Similarity=0.140 Sum_probs=114.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.- |+..+..+.|... +.+|++..|..... +.+.++.+.
T Consensus 5 l~~k~vlVTGasg~~--GIG~~ia~~l~~~---------------G~~V~~~~r~~~~~---~~~~~~~~~--------- 55 (266)
T 3oig_A 5 LEGRNIVVMGVANKR--SIAWGIARSLHEA---------------GARLIFTYAGERLE---KSVHELAGT--------- 55 (266)
T ss_dssp CTTCEEEEECCCSTT--SHHHHHHHHHHHT---------------TCEEEEEESSGGGH---HHHHHHHHT---------
T ss_pred cCCCEEEEEcCCCCC--cHHHHHHHHHHHC---------------CCEEEEecCchHHH---HHHHHHHHh---------
Confidence 457899999965332 2222223444322 56788888864432 233322211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC-------c----hhhHHHHHHhhHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR-------F----DAHLKVAVSINLRATK 313 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~-------f----~~~~~~~~~~Nv~gt~ 313 (782)
.+ ..++.++.+|++++ ++++++++ .+|++||+|+... + .+.+...+++|+.|+.
T Consensus 56 ~~--~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 127 (266)
T 3oig_A 56 LD--RNDSIILPCDVTND------AEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLT 127 (266)
T ss_dssp SS--SCCCEEEECCCSSS------HHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred cC--CCCceEEeCCCCCH------HHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHH
Confidence 01 13789999999998 77777665 5799999999753 1 1345568899999999
Q ss_pred HHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 314 ALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 314 ~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
++++.+... .+-.++|++||...+.... ....|+.||+..+
T Consensus 128 ~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~ 169 (266)
T 3oig_A 128 AVVKAARPMMTEGGSIVTLTYLGGELVMP--------------------------------------NYNVMGVAKASLD 169 (266)
T ss_dssp HHHHHHGGGCTTCEEEEEEECGGGTSCCT--------------------------------------TTHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCceEEEEecccccccCC--------------------------------------CcchhHHHHHHHH
Confidence 999998754 2235899999986543210 1168999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+.+.. ..|+.+..++||.|..+.
T Consensus 170 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (266)
T 3oig_A 170 ASVKYLAADLGKENIRVNSISAGPIRTLS 198 (266)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCCCSGG
T ss_pred HHHHHHHHHHhhcCcEEEEEecCcccccc
Confidence 988765 348999999999887653
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.15 E-value=2.1e-10 Score=118.41 Aligned_cols=165 Identities=17% Similarity=0.240 Sum_probs=109.1
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ....+..+++..
T Consensus 3 ~~k~vlVTGas~giG~~i----a~~l~~---------------~G~~V~~~~r~~~-~~~~~~~~~~~~----------- 51 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAI----AIDLAK---------------QGANVVVNYAGNE-QKANEVVDEIKK----------- 51 (246)
T ss_dssp TTCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESSCH-HHHHHHHHHHHH-----------
T ss_pred CCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCCH-HHHHHHHHHHHh-----------
Confidence 468999999644444333 233322 2567888887321 111222222211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.++.+.
T Consensus 52 --~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 123 (246)
T 2uvd_A 52 --LGSDAIAVRADVANA------EDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKA 123 (246)
T ss_dssp --TTCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred --cCCcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 013678899999987 77777766 68999999997532 134567899999997777666
Q ss_pred HH----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 319 AK----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 319 a~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+. +. +..++|++||.......+ ....|+.||...+.+
T Consensus 124 ~~~~~~~~-~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~ 164 (246)
T 2uvd_A 124 VSRFMMRQ-RHGRIVNIASVVGVTGNP--------------------------------------GQANYVAAKAGVIGL 164 (246)
T ss_dssp HHHHHHHH-TCEEEEEECCTHHHHCCT--------------------------------------TBHHHHHHHHHHHHH
T ss_pred HHHHHHHc-CCcEEEEECCHHhcCCCC--------------------------------------CCchHHHHHHHHHHH
Confidence 43 33 568999999986542210 016799999988888
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+++.+++||.+.++
T Consensus 165 ~~~la~e~~~~gi~v~~v~Pg~v~t~ 190 (246)
T 2uvd_A 165 TKTSAKELASRNITVNAIAPGFIATD 190 (246)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBGGG
T ss_pred HHHHHHHhhhcCeEEEEEEeccccCc
Confidence 7654 35899999999988764
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=5.3e-10 Score=115.67 Aligned_cols=163 Identities=15% Similarity=0.167 Sum_probs=109.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ...+.+++
T Consensus 5 l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~-~~~~~~~~------------- 51 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAI----AERFAV---------------EGADIAIADLVPAP-EAEAAIRN------------- 51 (249)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESSCCH-HHHHHHHH-------------
T ss_pred CCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEcCCchh-HHHHHHHh-------------
Confidence 4578999999644444333 233322 25678888886421 12221211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 52 ---~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 122 (249)
T 2ew8_A 52 ---LGRRVLTVKCDVSQP------GDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 122 (249)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---cCCcEEEEEeecCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 013688899999987 77776653 68999999997532 23456789999999888887
Q ss_pred HH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
++ ++. +..++|++||...+.... ....|+.||...|.
T Consensus 123 ~~~~~~~~~-~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~ 163 (249)
T 2ew8_A 123 AFVPGMKRN-GWGRIINLTSTTYWLKIE--------------------------------------AYTHYISTKAANIG 163 (249)
T ss_dssp HHHHHHHHH-TCEEEEEECCGGGGSCCS--------------------------------------SCHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCeEEEEEcchhhccCCC--------------------------------------CchhHHHHHHHHHH
Confidence 73 443 568999999987653210 11689999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+++.+++||.+.++
T Consensus 164 ~~~~la~e~~~~gi~v~~v~Pg~v~t~ 190 (249)
T 2ew8_A 164 FTRALASDLGKDGITVNAIAPSLVRTA 190 (249)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCC---
T ss_pred HHHHHHHHHHhcCcEEEEEecCcCcCc
Confidence 88775 34899999999998875
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=5.6e-10 Score=117.18 Aligned_cols=167 Identities=17% Similarity=0.192 Sum_probs=112.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++..
T Consensus 19 l~~k~vlVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~~~---------- 67 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAI----VEELAG---------------LGARVYTCSRNEK--ELDECLEIWRE---------- 67 (273)
T ss_dssp CTTCEEEEESCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHHH----------
T ss_pred CCCCEEEEECCcchHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHh----------
Confidence 4579999999544443332 233322 2567888888642 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh--------cCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV--------DNIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~--------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++++.++ ..+|++||+|+.... .+.++..+++|+.|+.+++
T Consensus 68 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~ 138 (273)
T 1ae1_A 68 ---KGLNVEGSVCDLLSR------TERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 138 (273)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---cCCceEEEECCCCCH------HHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHH
Confidence 113688899999987 7777666 468999999997532 2456678899999999999
Q ss_pred HHHHH---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKE---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+++.. ..+..++|++||..++.... ....|+.||...|.
T Consensus 139 ~~~~~~m~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~ 180 (273)
T 1ae1_A 139 QIAYPLLKASQNGNVIFLSSIAGFSALP--------------------------------------SVSLYSASKGAINQ 180 (273)
T ss_dssp HHHHHHHHHHTSEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEEEcCHhhcCCCC--------------------------------------CcchhHHHHHHHHH
Confidence 98742 12567999999987654310 11689999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.+.. ..|+++.+++||.+.++.
T Consensus 181 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (273)
T 1ae1_A 181 MTKSLACEWAKDNIRVNSVAPGVILTPL 208 (273)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred HHHHHHHHHhhcCcEEEEEEeCCCcCch
Confidence 88765 348999999999998764
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.3e-10 Score=121.96 Aligned_cols=167 Identities=15% Similarity=0.134 Sum_probs=113.5
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|.... ..+..+++..
T Consensus 28 ~l~gk~vlVTGas~gIG~~l----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~--------- 77 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLAT----ATEFAR---------------RGARLVLSDVDQPA--LEQAVNGLRG--------- 77 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH---------
T ss_pred ccCCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEECCHHH--HHHHHHHHHh---------
Confidence 45689999999654444333 233332 25678888886431 2222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.+++
T Consensus 78 ----~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 147 (301)
T 3tjr_A 78 ----QGFDAHGVVCDVRHL------DEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAV 147 (301)
T ss_dssp ----TTCCEEEEECCTTCH------HHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ----cCCceEEEEccCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHH
Confidence 124788999999997 77777665 68999999997532 2445678999999999999
Q ss_pred HHHHH----ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMAKE----MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a~~----~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+++.. .+...++|++||...+.... ....|+.||...+
T Consensus 148 ~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~ 189 (301)
T 3tjr_A 148 EAFLPRLLEQGTGGHIAFTASFAGLVPNA--------------------------------------GLGTYGVAKYGVV 189 (301)
T ss_dssp HHHHHHHHHHCSCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEEeCchhhcCCCC--------------------------------------CchHHHHHHHHHH
Confidence 98643 22256899999987553210 1168999999888
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.... ..|+.+.+++||.|..+
T Consensus 190 ~~~~~la~e~~~~gi~v~~v~PG~v~T~ 217 (301)
T 3tjr_A 190 GLAETLAREVKPNGIGVSVLCPMVVETK 217 (301)
T ss_dssp HHHHHHHHHHGGGTEEEEEECCSCCCSS
T ss_pred HHHHHHHHHhcccCcEEEEEECCccccc
Confidence 887665 34899999999988753
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.9e-10 Score=120.67 Aligned_cols=168 Identities=17% Similarity=0.174 Sum_probs=114.7
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 38 ~l~~k~vlVTGas~GIG~ai----a~~la~---------------~G~~V~~~~r~~~~--~~~~~~~l~~--------- 87 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGI----ATVFAR---------------AGANVAVAARSPRE--LSSVTAELGE--------- 87 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEEESSGGG--GHHHHHHHTT---------
T ss_pred CCCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEECCHHH--HHHHHHHHHh---------
Confidence 35689999999544443333 233332 25678888886432 2222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
....++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.+++
T Consensus 88 ---~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 158 (293)
T 3rih_A 88 ---LGAGNVIGVRLDVSDP------GSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTV 158 (293)
T ss_dssp ---SSSSCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---hCCCcEEEEEEeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence 0114788999999997 77666655 56999999997532 2455678999999999999
Q ss_pred HHHH----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMAK----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+++. +. +..++|++||....... . +....|+.||...+
T Consensus 159 ~~~~~~m~~~-~~g~iV~isS~~~~~~~--------------------------------~-----~~~~~Y~asKaa~~ 200 (293)
T 3rih_A 159 QACLAPLTAS-GRGRVILTSSITGPVTG--------------------------------Y-----PGWSHYGASKAAQL 200 (293)
T ss_dssp HHTHHHHHHH-SSCEEEEECCSBTTTBB--------------------------------C-----TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCEEEEEeChhhccCC--------------------------------C-----CCCHHHHHHHHHHH
Confidence 9873 33 56899999998642110 0 01168999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+++.+++||.|.++
T Consensus 201 ~l~~~la~e~~~~gI~vn~v~PG~v~t~ 228 (293)
T 3rih_A 201 GFMRTAAIELAPRGVTVNAILPGNILTE 228 (293)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred HHHHHHHHHHhhhCeEEEEEecCCCcCc
Confidence 988765 35899999999999875
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=7.2e-10 Score=115.89 Aligned_cols=167 Identities=17% Similarity=0.154 Sum_probs=111.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++...
T Consensus 11 l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~~--------- 60 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRAT----AVRLAA---------------EGAKLSLVDVSSEG--LEASKAAVLET--------- 60 (267)
T ss_dssp CTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHHH---------
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHhh---------
Confidence 5689999999544444332 233322 25678888886421 22222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Ll 316 (782)
. ...++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+..+.
T Consensus 61 ~--~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~ 132 (267)
T 1iy8_A 61 A--PDAEVLTTVADVSDE------AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGL 132 (267)
T ss_dssp C--TTCCEEEEECCTTSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHH
T ss_pred c--CCceEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHH
Confidence 0 013688899999987 77777765 57999999997533 1445678899999988776
Q ss_pred HHH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+.+ ++. +..++|++||...+.... ....|+.||...+
T Consensus 133 ~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~ 173 (267)
T 1iy8_A 133 EKVLKIMREQ-GSGMVVNTASVGGIRGIG--------------------------------------NQSGYAAAKHGVV 173 (267)
T ss_dssp HHHHHHHHHH-TCCEEEEECCGGGTSBCS--------------------------------------SBHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCEEEEEcchhhccCCC--------------------------------------CCccHHHHHHHHH
Confidence 654 333 568999999986543210 0168999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+.+.+++||.+.++
T Consensus 174 ~~~~~la~e~~~~gi~v~~v~PG~v~t~ 201 (267)
T 1iy8_A 174 GLTRNSAVEYGRYGIRINAIAPGAIWTP 201 (267)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred HHHHHHHHHHHhcCeEEEEEEeCCCcCc
Confidence 888765 34899999999998864
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.14 E-value=4.3e-10 Score=117.73 Aligned_cols=168 Identities=17% Similarity=0.153 Sum_probs=111.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+.+|..+ .+.|.. .+.+|++..|... ....+...+...
T Consensus 23 ~~~k~vlITGas~gIG~~~----a~~l~~---------------~G~~v~~~~~~~~-~~~~~~~~~~~~---------- 72 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAI----SRRLHD---------------AGMAVAVSHSERN-DHVSTWLMHERD---------- 72 (269)
T ss_dssp -CCCEEEETTTTSHHHHHH----HHHHHT---------------TTCEEEEEECSCH-HHHHHHHHHHHT----------
T ss_pred hcCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEcCCch-HHHHHHHHHHHh----------
Confidence 4578999999544433332 233322 2567777764332 112222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 73 ---~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 143 (269)
T 3gk3_A 73 ---AGRDFKAYAVDVADF------ESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTK 143 (269)
T ss_dssp ---TTCCCEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---cCCceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 124789999999997 77776665 68999999997532 24456789999999999998
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+..++|++||...+.... ....|+.||+..+.+
T Consensus 144 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~ 185 (269)
T 3gk3_A 144 QFIAGMVERRFGRIVNIGSVNGSRGAF--------------------------------------GQANYASAKAGIHGF 185 (269)
T ss_dssp HHHHHHHHHTCEEEEEECCHHHHHCCT--------------------------------------TBHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeCChhhccCCC--------------------------------------CcchHHHHHHHHHHH
Confidence 86431 2557999999986542210 016899999988888
Q ss_pred HHHc-----CCCCcEEEecCCeEEecc
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+.. ..|+++.+++||.|..+.
T Consensus 186 ~~~la~e~~~~gi~v~~v~PG~v~T~~ 212 (269)
T 3gk3_A 186 TKTLALETAKRGITVNTVSPGYLATAM 212 (269)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHhhhcCCEEEEEecCcccchh
Confidence 7665 348999999999887643
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=8.7e-10 Score=115.82 Aligned_cols=165 Identities=16% Similarity=0.098 Sum_probs=111.6
Q ss_pred cCCCeeEeeccc--cCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 172 YLSKMVAVTGDC--LKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 172 ~~~k~vlvTG~~--~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
+.+|+++|||.. +.+|.. ..+.|.. .+.+|+++.|.... .+.++++...
T Consensus 4 l~~k~vlVTGas~~~gIG~~----~a~~l~~---------------~G~~V~~~~r~~~~---~~~~~~l~~~------- 54 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYG----IAQSCFN---------------QGATLAFTYLNESL---EKRVRPIAQE------- 54 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHH----HHHHHHT---------------TTCEEEEEESSTTT---HHHHHHHHHH-------
T ss_pred CCCCEEEEECCCCCCcHHHH----HHHHHHH---------------CCCEEEEEeCCHHH---HHHHHHHHHh-------
Confidence 347899999954 333322 2333332 25678888887532 2223322110
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----------hhhHHHHHHhhHHH
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----------DAHLKVAVSINLRA 311 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~g 311 (782)
..++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|
T Consensus 55 ------~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g 122 (275)
T 2pd4_A 55 ------LNSPYVYELDVSKE------EHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 122 (275)
T ss_dssp ------TTCCCEEECCTTCH------HHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHH
T ss_pred ------cCCcEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHH
Confidence 11367899999987 77776665 57999999997532 13456789999999
Q ss_pred HHHHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 312 TKALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 312 t~~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
+.++++++... .+-.++|++||....... + ....|+.||..
T Consensus 123 ~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------------------------------~-----~~~~Y~asK~a 164 (275)
T 2pd4_A 123 LIELTNTLKPLLNNGASVLTLSYLGSTKYM---------------------------------A-----HYNVMGLAKAA 164 (275)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEECGGGTSBC---------------------------------T-----TCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCEEEEEecchhcCCC---------------------------------C-----CchhhHHHHHH
Confidence 99999998754 112589999997653210 0 01579999999
Q ss_pred HHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 391 AEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 391 aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.+.. ..|+.+.+++||.|.++
T Consensus 165 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 194 (275)
T 2pd4_A 165 LESAVRYLAVDLGKHHIRVNALSAGPIRTL 194 (275)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence 99988765 35899999999998865
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.14 E-value=4.6e-10 Score=116.18 Aligned_cols=113 Identities=12% Similarity=0.202 Sum_probs=85.7
Q ss_pred eeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH----H
Q psy16243 259 MVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA----K 320 (782)
Q Consensus 259 v~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a----~ 320 (782)
+.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.++++++ +
T Consensus 48 ~~~~~~D~~d~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~ 121 (250)
T 2fwm_X 48 FATEVMDVADA------AQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFR 121 (250)
T ss_dssp SEEEECCTTCH------HHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ceEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 67889999987 77777775 68999999997532 2456678999999999999987 3
Q ss_pred HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 321 EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 321 ~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
+. +..++|++||...+... +....|+.||...|.+.+..
T Consensus 122 ~~-~~g~iv~isS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~~la~ 162 (250)
T 2fwm_X 122 RQ-RGGAIVTVASDAAHTPR--------------------------------------IGMSAYGASKAALKSLALSVGL 162 (250)
T ss_dssp HH-TCCEEEEECCGGGTSCC--------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred hc-CCCEEEEECchhhCCCC--------------------------------------CCCchHHHHHHHHHHHHHHHHH
Confidence 33 56899999998764321 01168999999999988765
Q ss_pred ---CCCCcEEEecCCeEEecc
Q psy16243 399 ---GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 399 ---~~glp~~IvRp~~v~G~~ 416 (782)
..|+++.++|||.+.++.
T Consensus 163 e~~~~gi~v~~v~Pg~v~t~~ 183 (250)
T 2fwm_X 163 ELAGSGVRCNVVSPGSTDTDM 183 (250)
T ss_dssp HHGGGTCEEEEEEECCC----
T ss_pred HhCccCCEEEEEECCcccCcc
Confidence 348999999999998764
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.13 E-value=6.5e-10 Score=117.24 Aligned_cols=168 Identities=18% Similarity=0.121 Sum_probs=114.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|... ...+..+++..
T Consensus 6 l~gk~vlVTGas~GIG~ai----a~~la~---------------~G~~V~~~~r~~~--~~~~~~~~~~~---------- 54 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAA----ALLFAR---------------EGAKVVVTARNGN--ALAELTDEIAG---------- 54 (280)
T ss_dssp TTTCEEEESSTTSHHHHHH----HHHHHH---------------TTCEEEECCSCHH--HHHHHHHHHTT----------
T ss_pred CCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEECCHH--HHHHHHHHHHh----------
Confidence 4589999999644433332 233332 2567888877643 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.+++
T Consensus 55 ---~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 125 (280)
T 3tox_A 55 ---GGGEAAALAGDVGDE------ALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAA 125 (280)
T ss_dssp ---TTCCEEECCCCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---cCCcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 124788999999997 77777665 68999999996521 1446678999999999999
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+++... .+-.++|++||...+.... +....|+.||...+.
T Consensus 126 ~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------------------------------~~~~~Y~asKaa~~~ 168 (280)
T 3tox_A 126 KYQVPAIAALGGGSLTFTSSFVGHTAGF-------------------------------------AGVAPYAASKAGLIG 168 (280)
T ss_dssp HHHHHHHHHTTCEEEEEECCSBTTTBCC-------------------------------------TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcChhhCcCCC-------------------------------------CCchhHHHHHHHHHH
Confidence 986432 2456999999987652110 011679999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.+.. ..|+.+..++||.|.++.
T Consensus 169 l~~~la~e~~~~gIrvn~v~PG~v~T~~ 196 (280)
T 3tox_A 169 LVQALAVELGARGIRVNALLPGGTDTPA 196 (280)
T ss_dssp HHHHHHHHHHTTTEEEEEEEECSBSSTT
T ss_pred HHHHHHHHhhhcCeEEEEEEECCCCCch
Confidence 88765 358999999999988753
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=3.2e-10 Score=118.84 Aligned_cols=167 Identities=19% Similarity=0.229 Sum_probs=111.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... ...+..+++..
T Consensus 26 l~~k~vlVTGas~gIG~ai----a~~la~---------------~G~~V~~~~~~~~~-~~~~~~~~~~~---------- 75 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAI----ALELAA---------------AGAKVAVNYASSAG-AADEVVAAIAA---------- 75 (269)
T ss_dssp TTTCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESSCHH-HHHHHHHHHHH----------
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCChH-HHHHHHHHHHh----------
Confidence 4589999999544333332 233322 25677777774321 11222222111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 76 ---~~~~~~~~~~D~~d~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 146 (269)
T 4dmm_A 76 ---AGGEAFAVKADVSQE------SEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSR 146 (269)
T ss_dssp ---TTCCEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---cCCcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 124788999999997 77777665 67999999997532 24566789999999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+..++|++||........ ....|+.||...+.+
T Consensus 147 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~l 188 (269)
T 4dmm_A 147 AAAKIMLKQRSGRIINIASVVGEMGNP--------------------------------------GQANYSAAKAGVIGL 188 (269)
T ss_dssp HHHHHHHHHTCCEEEEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEECchhhcCCCC--------------------------------------CchhHHHHHHHHHHH
Confidence 86431 2457999999986542210 116899999988887
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+++.+++||.|.++
T Consensus 189 ~~~la~e~~~~gi~vn~v~PG~v~T~ 214 (269)
T 4dmm_A 189 TKTVAKELASRGITVNAVAPGFIATD 214 (269)
T ss_dssp HHHHHHHHGGGTCEEEEEEECCBTTS
T ss_pred HHHHHHHHhhhCcEEEEEEECCCcCc
Confidence 7665 35899999999988754
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.13 E-value=2e-10 Score=120.54 Aligned_cols=166 Identities=18% Similarity=0.157 Sum_probs=112.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... ..+...++..
T Consensus 26 l~~k~~lVTGas~GIG~ai----a~~la~---------------~G~~V~~~~r~~~~--~~~~~~~~~~---------- 74 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAI----ALELAR---------------RGAMVIGTATTEAG--AEGIGAAFKQ---------- 74 (270)
T ss_dssp TTTCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESSHHH--HHHHHHHHHH----------
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh----------
Confidence 5689999999644444333 233332 25678888885431 2222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++..+.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 75 ---~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 145 (270)
T 3ftp_A 75 ---AGLEGRGAVLNVNDA------TAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSR 145 (270)
T ss_dssp ---HTCCCEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---cCCcEEEEEEeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence 123678899999987 77777665 68999999997532 24566789999999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+-.++|++||........ ....|+.||...+.+
T Consensus 146 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l 187 (270)
T 3ftp_A 146 AVLRPMMKARGGRIVNITSVVGSAGNP--------------------------------------GQVNYAAAKAGVAGM 187 (270)
T ss_dssp HHHHHHHHHTCEEEEEECCHHHHHCCT--------------------------------------TBHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEECchhhCCCCC--------------------------------------CchhHHHHHHHHHHH
Confidence 87521 2456899999986542210 016799999988888
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+++.+++||.|..+
T Consensus 188 ~~~la~e~~~~gI~vn~v~PG~v~T~ 213 (270)
T 3ftp_A 188 TRALAREIGSRGITVNCVAPGFIDTD 213 (270)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCSH
T ss_pred HHHHHHHHhhhCeEEEEEEeCCCcCc
Confidence 7665 35899999999988754
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.13 E-value=5.2e-11 Score=124.55 Aligned_cols=166 Identities=14% Similarity=0.142 Sum_probs=109.4
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+...++.+. +
T Consensus 6 ~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~~--~------- 55 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAF----AEALLL---------------KGAKVALVDWNLEA--GVQCKAALHEQ--F------- 55 (267)
T ss_dssp TTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHTTT--S-------
T ss_pred CCCEEEEECCCCcHHHHH----HHHHHH---------------CCCEEEEEECCHHH--HHHHHHHHHhh--c-------
Confidence 468999999544444333 233322 25778888886321 12222222110 0
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHH----HHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVRFDAHLKVAVSINLRATKALLEM----AKE 321 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~----a~~ 321 (782)
...++.++.+|++++ ++++.+++. +|++||+|+... .+.++..+++|+.|+..+.+. +++
T Consensus 56 --~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 126 (267)
T 2gdz_A 56 --EPQKTLFIQCDVADQ------QQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSK 126 (267)
T ss_dssp --CGGGEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCG
T ss_pred --CCCceEEEecCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 023688999999987 777776654 699999999754 456778889999876655544 433
Q ss_pred cc--CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 322 MK--QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 322 ~~--~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+ +..++|++||.+++.... ....|+.||...|.+.+.+
T Consensus 127 ~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~a 168 (267)
T 2gdz_A 127 QNGGEGGIIINMSSLAGLMPVA--------------------------------------QQPVYCASKHGIVGFTRSAA 168 (267)
T ss_dssp GGTCCCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCccccCCCC--------------------------------------CCchHHHHHHHHHHHHHHHH
Confidence 32 157899999987654210 0157999999999988752
Q ss_pred ------CCCCcEEEecCCeEEec
Q psy16243 399 ------GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ------~~glp~~IvRp~~v~G~ 415 (782)
..|+++.+++||.+.++
T Consensus 169 la~e~~~~gi~v~~v~Pg~v~t~ 191 (267)
T 2gdz_A 169 LAANLMNSGVRLNAICPGFVNTA 191 (267)
T ss_dssp HHHHHHTCCEEEEEEEESCBSSH
T ss_pred HHHHhccCCcEEEEEecCcCcch
Confidence 46899999999988764
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.5e-10 Score=121.08 Aligned_cols=178 Identities=13% Similarity=0.074 Sum_probs=117.6
Q ss_pred CcccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccc
Q psy16243 169 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPM 248 (782)
Q Consensus 169 ~p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l 248 (782)
.+.+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|... ++++..+
T Consensus 11 ~~~l~gk~vlVTGas~gIG~~~----a~~L~~---------------~G~~V~~~~r~~~------~~~~~~~------- 58 (291)
T 3rd5_A 11 LPSFAQRTVVITGANSGLGAVT----ARELAR---------------RGATVIMAVRDTR------KGEAAAR------- 58 (291)
T ss_dssp CCCCTTCEEEEECCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHH------HHHHHHT-------
T ss_pred ccCCCCCEEEEeCCCChHHHHH----HHHHHH---------------CCCEEEEEECCHH------HHHHHHH-------
Confidence 3456789999999544444332 233322 2568888888643 1121111
Q ss_pred cccCcccccceeEEecCCCCCCCCCCHHhHHHHhc---CceEEEEcCcccCc-----hhhHHHHHHhhHHHHHHHHHHHH
Q psy16243 249 RKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD---NIHVVFHCAATVRF-----DAHLKVAVSINLRATKALLEMAK 320 (782)
Q Consensus 249 ~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~---~vdiViH~Aa~v~f-----~~~~~~~~~~Nv~gt~~Lle~a~ 320 (782)
....++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 59 -----~~~~~~~~~~~Dl~d~------~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 127 (291)
T 3rd5_A 59 -----TMAGQVEVRELDLQDL------SSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLL 127 (291)
T ss_dssp -----TSSSEEEEEECCTTCH------HHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHG
T ss_pred -----HhcCCeeEEEcCCCCH------HHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0124789999999987 88888887 56999999997532 24455789999999999999988
Q ss_pred HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 321 EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 321 ~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
.. ..+++|++||...+.......+...+. .+ ......|+.||+..+.+.+..
T Consensus 128 ~~-~~~riv~isS~~~~~~~~~~~~~~~~~----------------------~~---~~~~~~Y~~sK~a~~~~~~~la~ 181 (291)
T 3rd5_A 128 PR-LTDRVVTVSSMAHWPGRINLEDLNWRS----------------------RR---YSPWLAYSQSKLANLLFTSELQR 181 (291)
T ss_dssp GG-EEEEEEEECCGGGTTCCCCSSCTTCSS----------------------SC---CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-HHhheeEeechhhccCCCCcccccccc----------------------cC---CCCcchHHHHHHHHHHHHHHHHH
Confidence 75 456999999987664321111000000 00 001167999999999888765
Q ss_pred ---CCC--CcEEEecCCeEEec
Q psy16243 399 ---GAG--MPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ---~~g--lp~~IvRp~~v~G~ 415 (782)
..| +.+..++||.|..+
T Consensus 182 e~~~~g~~i~v~~v~PG~v~T~ 203 (291)
T 3rd5_A 182 RLTAAGSPLRALAAHPGYSHTN 203 (291)
T ss_dssp HHHHTTCCCEEEEECCSGGGSC
T ss_pred HHhhCCCCEEEEEeeCCCCccc
Confidence 234 89999999988653
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=6.2e-10 Score=117.47 Aligned_cols=168 Identities=17% Similarity=0.143 Sum_probs=113.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|..... ..+..+++..
T Consensus 27 ~~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~~-~~~~~~~~~~---------- 76 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREM----AMELGR---------------RGCKVIVNYANSTES-AEEVVAAIKK---------- 76 (283)
T ss_dssp CTTCEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEEESSCHHH-HHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCchHH-HHHHHHHHHH----------
Confidence 4579999999644443332 233322 256788888864311 1111122111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 77 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 147 (283)
T 1g0o_A 77 ---NGSDAACVKANVGVV------EDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAR 147 (283)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---hCCCeEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence 113688899999987 66666554 57999999997543 24566789999999999999
Q ss_pred HHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 318 MAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 318 ~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
++... .+..++|++||........ +....|+.||+..|.+.+
T Consensus 148 ~~~~~~~~~g~iv~isS~~~~~~~~-------------------------------------~~~~~Y~asK~a~~~~~~ 190 (283)
T 1g0o_A 148 EAYKHLEIGGRLILMGSITGQAKAV-------------------------------------PKHAVYSGSKGAIETFAR 190 (283)
T ss_dssp HHHHHSCTTCEEEEECCGGGTCSSC-------------------------------------SSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEechhhccCCC-------------------------------------CCCcchHHHHHHHHHHHH
Confidence 98764 3457999999986532210 001679999999999887
Q ss_pred Hc-----CCCCcEEEecCCeEEec
Q psy16243 397 RG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~ 415 (782)
.. ..|+.+.+++||.|.++
T Consensus 191 ~la~e~~~~gi~v~~v~PG~v~t~ 214 (283)
T 1g0o_A 191 CMAIDMADKKITVNVVAPGGIKTD 214 (283)
T ss_dssp HHHHHHGGGTCEEEEEEECCBSSH
T ss_pred HHHHHhcccCeEEEEEecCcccch
Confidence 65 34899999999999875
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.13 E-value=3e-10 Score=118.70 Aligned_cols=155 Identities=18% Similarity=0.191 Sum_probs=109.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|... +.+|+++.|....
T Consensus 6 l~~k~vlVTGas~gIG~~i----a~~l~~~---------------G~~V~~~~r~~~~---------------------- 44 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAI----AERFVDE---------------GSKVIDLSIHDPG---------------------- 44 (264)
T ss_dssp GTTCEEEEESCSSHHHHHH----HHHHHHT---------------TCEEEEEESSCCC----------------------
T ss_pred cCCCEEEEeCCCCHHHHHH----HHHHHHC---------------CCEEEEEecCccc----------------------
Confidence 4578999999654444333 2333322 5678888775431
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 45 ----~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 114 (264)
T 2dtx_A 45 ----EAKYDHIECDVTNP------DQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASK 114 (264)
T ss_dssp ----SCSSEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----CCceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence 12577899999987 77777665 68999999997532 23566789999999999998
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+..++|++||..++.... ....|+.||...|.+
T Consensus 115 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~ 156 (264)
T 2dtx_A 115 FAIPYMIRSRDPSIVNISSVQASIITK--------------------------------------NASAYVTSKHAVIGL 156 (264)
T ss_dssp HHHHHHTTSSSCEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEECCchhccCCC--------------------------------------CchhHHHHHHHHHHH
Confidence 87542 2457999999987653210 016899999999998
Q ss_pred HHHc----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ...+.+.+++||.+.++
T Consensus 157 ~~~la~e~~~~i~vn~v~PG~v~t~ 181 (264)
T 2dtx_A 157 TKSIALDYAPLLRCNAVCPATIDTP 181 (264)
T ss_dssp HHHHHHHHTTTSEEEEEEECSBCSH
T ss_pred HHHHHHHhcCCcEEEEEEeCCCcCc
Confidence 8765 22288899999888653
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.13 E-value=8.4e-10 Score=116.16 Aligned_cols=166 Identities=18% Similarity=0.173 Sum_probs=113.3
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
+.+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|... ...+..+++
T Consensus 25 ~~l~gk~vlVTGas~gIG~ai----a~~la~---------------~G~~V~~~~r~~~--~~~~~~~~~---------- 73 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAV----ARRLAD---------------EGCHVLCADIDGD--AADAAATKI---------- 73 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHH----HHHHHH---------------TTCEEEEEESSHH--HHHHHHHHH----------
T ss_pred cCCCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHc----------
Confidence 346689999999544433332 233322 2567888887532 122222211
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHH
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~L 315 (782)
..++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.++
T Consensus 74 ------~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l 141 (277)
T 3gvc_A 74 ------GCGAAACRVDVSDE------QQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLC 141 (277)
T ss_dssp ------CSSCEEEECCTTCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ------CCcceEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence 13678899999987 77766665 67999999997532 245667899999999999
Q ss_pred HHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 316 LEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 316 le~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
++++... .+-.++|++||........ ....|+.||...|
T Consensus 142 ~~~~~~~m~~~~~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~ 183 (277)
T 3gvc_A 142 TKHAAPRMIERGGGAIVNLSSLAGQVAVG--------------------------------------GTGAYGMSKAGII 183 (277)
T ss_dssp HHHHHHHHHHTTCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEEEcchhhccCCC--------------------------------------CchhHHHHHHHHH
Confidence 9886532 2456899999986543210 1168999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+.+.. ..|+++.+++||.|.++.
T Consensus 184 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 212 (277)
T 3gvc_A 184 QLSRITAAELRSSGIRSNTLLPAFVDTPM 212 (277)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHhcccCeEEEEEeeCCccCch
Confidence 988755 358999999999998753
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.12 E-value=3.7e-10 Score=116.86 Aligned_cols=163 Identities=15% Similarity=0.160 Sum_probs=110.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+.+|..+ .+.|.. .+.+|++..|.... .+.+.+..
T Consensus 7 l~gk~~lVTGas~gIG~a~----a~~l~~---------------~G~~V~~~~r~~~~---~~~~~~~~----------- 53 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAI----AELLAE---------------RGAKVIGTATSESG---AQAISDYL----------- 53 (248)
T ss_dssp CTTCEEEESSCSSHHHHHH----HHHHHH---------------TTCEEEEEESSHHH---HHHHHHHH-----------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH---HHHHHHHh-----------
Confidence 4579999999544433332 233332 25678888775331 12222111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++..+.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 54 ----~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~ 123 (248)
T 3op4_A 54 ----GDNGKGMALNVTNP------ESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSK 123 (248)
T ss_dssp ----GGGEEEEECCTTCH------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----cccceEEEEeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence 12467889999987 77777766 68999999997532 24566789999999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+..++|++||....... +....|+.||...+.+
T Consensus 124 ~~~~~m~~~~~g~iv~isS~~~~~~~--------------------------------------~~~~~Y~asK~a~~~l 165 (248)
T 3op4_A 124 AVLRGMMKKRQGRIINVGSVVGTMGN--------------------------------------AGQANYAAAKAGVIGF 165 (248)
T ss_dssp HHHHHHHHHTCEEEEEECCHHHHHCC--------------------------------------TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEcchhhcCCC--------------------------------------CCChHHHHHHHHHHHH
Confidence 86431 255799999998654221 0116899999988888
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+++..++||.|..+
T Consensus 166 ~~~la~e~~~~gi~vn~v~PG~v~T~ 191 (248)
T 3op4_A 166 TKSMAREVASRGVTVNTVAPGFIETD 191 (248)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBSST
T ss_pred HHHHHHHHHHhCeEEEEEeeCCCCCc
Confidence 7665 34899999999888654
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.12 E-value=5.2e-10 Score=116.04 Aligned_cols=162 Identities=18% Similarity=0.150 Sum_probs=109.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++
T Consensus 4 l~~k~vlVTGas~giG~~i----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~------------ 50 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEV----VKLLLG---------------EGAKVAFSDINEA--AGQQLAAEL------------ 50 (253)
T ss_dssp TTTCEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEECSCHH--HHHHHHHHH------------
T ss_pred CCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHc------------
Confidence 3578999999544444333 233322 2567888877532 111111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++++.+++. +|++||+|+.... .+.++..+++|+.|+..+.+
T Consensus 51 ----~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~ 120 (253)
T 1hxh_A 51 ----GERSMFVRHDVSSE------ADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ 120 (253)
T ss_dssp ----CTTEEEECCCTTCH------HHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----CCceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHH
Confidence 13678899999987 777766653 6999999997532 24466788999998887776
Q ss_pred HHH----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAK----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+. +. + .++|++||...+.... ....|+.||...|.
T Consensus 121 ~~~~~~~~~-~-g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~ 160 (253)
T 1hxh_A 121 QGIAAMKET-G-GSIINMASVSSWLPIE--------------------------------------QYAGYSASKAAVSA 160 (253)
T ss_dssp HHHHHHTTT-C-EEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHH
T ss_pred HHHHHHHHc-C-CEEEEEcchhhcCCCC--------------------------------------CCccHHHHHHHHHH
Confidence 543 32 4 8999999987653210 01579999999999
Q ss_pred HHHHcC-----C--CCcEEEecCCeEEecc
Q psy16243 394 MVRRGG-----A--GMPVAMVRPSIVIATN 416 (782)
Q Consensus 394 ll~~~~-----~--glp~~IvRp~~v~G~~ 416 (782)
+.+... . |+++.++|||.++++.
T Consensus 161 ~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~ 190 (253)
T 1hxh_A 161 LTRAAALSCRKQGYAIRVNSIHPDGIYTPM 190 (253)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred HHHHHHHHhhhcCCCeEEEEEEeCCccCch
Confidence 887752 3 8999999999999853
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.12 E-value=4.3e-10 Score=118.48 Aligned_cols=165 Identities=15% Similarity=0.133 Sum_probs=111.2
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+.+|..+ .+.|.. .+.+|++..|... ...+..+++..
T Consensus 23 ~~k~~lVTGas~GIG~ai----a~~la~---------------~G~~V~~~~r~~~--~~~~~~~~l~~----------- 70 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAV----ARTLAA---------------RGIAVYGCARDAK--NVSAAVDGLRA----------- 70 (279)
T ss_dssp --CEEEEESTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHHT-----------
T ss_pred CCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHh-----------
Confidence 478999999544433332 233332 2567888888632 12222222211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.++++.
T Consensus 71 --~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 142 (279)
T 3sju_A 71 --AGHDVDGSSCDVTST------DEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTRE 142 (279)
T ss_dssp --TTCCEEEEECCTTCH------HHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred --cCCcEEEEECCCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 124788999999987 77766665 57999999997532 234567889999999999998
Q ss_pred HHH---c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 319 AKE---M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 319 a~~---~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.. + .+..++|++||....... +....|+.||...+.
T Consensus 143 ~~~~~~~~~~~~g~iV~isS~~~~~~~--------------------------------------~~~~~Y~asKaa~~~ 184 (279)
T 3sju_A 143 VLRAGGMREAGWGRIVNIASTGGKQGV--------------------------------------MYAAPYTASKHGVVG 184 (279)
T ss_dssp HHHHSSHHHHTCEEEEEECCGGGTSCC--------------------------------------TTCHHHHHHHHHHHH
T ss_pred HhchhhHhhcCCcEEEEECChhhccCC--------------------------------------CCChhHHHHHHHHHH
Confidence 754 1 245799999998754321 011679999998888
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+++.+++||.|.++
T Consensus 185 l~~~la~e~~~~gi~vn~v~PG~v~T~ 211 (279)
T 3sju_A 185 FTKSVGFELAKTGITVNAVCPGYVETP 211 (279)
T ss_dssp HHHHHHHHTGGGTEEEEEEEESSBCSH
T ss_pred HHHHHHHHHHhhCcEEEEEeeCcccch
Confidence 87765 35899999999988765
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.12 E-value=5.7e-10 Score=115.87 Aligned_cols=164 Identities=21% Similarity=0.193 Sum_probs=110.2
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 2 ~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~------------ 48 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAI----ALRLVK---------------DGFAVAIADYNDAT--AKAVASEINQ------------ 48 (256)
T ss_dssp CCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH------------
T ss_pred CCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh------------
Confidence 57899999544443332 233322 25678888886421 1222222111
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
...++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.++++.+
T Consensus 49 -~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 121 (256)
T 1geg_A 49 -AGGHAVAVKVDVSDR------DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAA 121 (256)
T ss_dssp -TTCCEEEEECCTTSH------HHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred -cCCcEEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 013678899999987 77777776 78999999986432 2345678999999999888876
Q ss_pred HHc---cC-CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 320 KEM---KQ-LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 320 ~~~---~~-~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
... .+ ..++|++||...+.... ....|+.||...|.+.
T Consensus 122 ~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~ 163 (256)
T 1geg_A 122 VEAFKKEGHGGKIINACSQAGHVGNP--------------------------------------ELAVYSSSKFAVRGLT 163 (256)
T ss_dssp HHHHHHHTSCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEEECchhhcCCCC--------------------------------------CchhHHHHHHHHHHHH
Confidence 432 13 57999999986542210 0157999999999888
Q ss_pred HHc-----CCCCcEEEecCCeEEec
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.. ..|+++.+++||.+.++
T Consensus 164 ~~la~e~~~~gi~v~~v~PG~v~t~ 188 (256)
T 1geg_A 164 QTAARDLAPLGITVNGYCPGIVKTP 188 (256)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred HHHHHHHHHcCeEEEEEEECCCccc
Confidence 765 34899999999988764
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=2e-10 Score=120.97 Aligned_cols=167 Identities=17% Similarity=0.191 Sum_probs=113.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|.... ..+...++..
T Consensus 25 l~~k~~lVTGas~GIG~ai----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~---------- 73 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRI----AEIFMR---------------HGCHTVIASRSLPR--VLTAARKLAG---------- 73 (277)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHT---------------TTCEEEEEESCHHH--HHHHHHHHHH----------
T ss_pred cCCCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHH----------
Confidence 5689999999544333332 233322 25678888886431 2222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
....++.++.+|++++ ++.+.+++ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 74 --~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 145 (277)
T 4fc7_A 74 --ATGRRCLPLSMDVRAP------PAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSR 145 (277)
T ss_dssp --HHSSCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred --hcCCcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence 0124788999999997 77776665 68999999995422 24566789999999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+..++|++||........ ....|+.||...+.+
T Consensus 146 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l 187 (277)
T 4fc7_A 146 VLYEKFFRDHGGVIVNITATLGNRGQA--------------------------------------LQVHAGSAKAAVDAM 187 (277)
T ss_dssp HHHHHTHHHHCEEEEEECCSHHHHTCT--------------------------------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEECchhhCCCCC--------------------------------------CcHHHHHHHHHHHHH
Confidence 87421 1356899999986542210 116799999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..++||.|.++
T Consensus 188 ~~~la~e~~~~gi~vn~v~PG~v~t~ 213 (277)
T 4fc7_A 188 TRHLAVEWGPQNIRVNSLAPGPISGT 213 (277)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBSSS
T ss_pred HHHHHHHhhhcCeEEEEEEECCEecc
Confidence 8765 34899999999988764
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.12 E-value=4.7e-10 Score=117.35 Aligned_cols=162 Identities=14% Similarity=0.185 Sum_probs=106.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|... ...+..++.
T Consensus 25 l~gk~vlVTGas~gIG~ai----a~~la~---------------~G~~V~~~~r~~~--~~~~~~~~~------------ 71 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAI----ARCFHA---------------QGAIVGLHGTRED--KLKEIAADL------------ 71 (266)
T ss_dssp CTTCEEEESSTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHH------------
T ss_pred cCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHh------------
Confidence 5689999999544444333 233322 2567777777532 112211111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+..+.+
T Consensus 72 ----~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 141 (266)
T 3grp_A 72 ----GKDVFVFSANLSDR------KSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTR 141 (266)
T ss_dssp ----CSSEEEEECCTTSH------HHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHH
T ss_pred ----CCceEEEEeecCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 23688999999997 77777765 68999999997532 24456788999999777666
Q ss_pred HH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+ ++. +..++|++||...+.... ....|+.||...+.
T Consensus 142 ~~~~~~~~~-~~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~ 182 (266)
T 3grp_A 142 ELIHSMMRR-RYGRIINITSIVGVVGNP--------------------------------------GQTNYCAAKAGLIG 182 (266)
T ss_dssp HHHHHHHHH-TCEEEEEECCC---------------------------------------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCcEEEEECCHHHcCCCC--------------------------------------CchhHHHHHHHHHH
Confidence 54 333 567999999986542210 01679999998888
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+++.+++||.|.++
T Consensus 183 ~~~~la~e~~~~gI~vn~v~PG~v~t~ 209 (266)
T 3grp_A 183 FSKALAQEIASRNITVNCIAPGFIKSA 209 (266)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCSH
T ss_pred HHHHHHHHhhhhCcEEEEEeeCcCCCc
Confidence 87665 34899999999988764
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.12 E-value=8.4e-10 Score=115.47 Aligned_cols=169 Identities=19% Similarity=0.218 Sum_probs=112.8
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
..+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 17 ~~l~~k~~lVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~-------- 67 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGI----AQGLAE---------------AGCSVVVASRNLEE--ASEAAQKLTE-------- 67 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH--------
T ss_pred cCCCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHH--------
Confidence 446689999999544444333 233322 25678888886321 1121222100
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHH
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKAL 315 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~L 315 (782)
....++.++.+|++++ ++++.+++ .+|++||+|+..... +.++..+++|+.|+.++
T Consensus 68 ----~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 137 (267)
T 1vl8_A 68 ----KYGVETMAFRCDVSNY------EEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYV 137 (267)
T ss_dssp ----HHCCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred ----hcCCeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHH
Confidence 0013678899999987 77777665 689999999975321 34567889999999999
Q ss_pred HHHHHHc---cCCceEEEEeccee-ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 316 LEMAKEM---KQLKSFVHVSTAYS-NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 316 le~a~~~---~~~~~fV~vST~~v-~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
++++... .+..++|++||..+ .... +....|+.||...
T Consensus 138 ~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~~Y~asK~a~ 179 (267)
T 1vl8_A 138 CREAFSLLRESDNPSIINIGSLTVEEVTM--------------------------------------PNISAYAASKGGV 179 (267)
T ss_dssp HHHHHHHHTTCSSCEEEEECCGGGTCCCS--------------------------------------SSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEECCcchhccCC--------------------------------------CCChhHHHHHHHH
Confidence 8886431 24679999999763 1110 0116899999999
Q ss_pred HHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 392 EDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 392 E~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
|.+.+.. ..|+++.+++||.+..+
T Consensus 180 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 208 (267)
T 1vl8_A 180 ASLTKALAKEWGRYGIRVNVIAPGWYRTK 208 (267)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCBCST
T ss_pred HHHHHHHHHHhcccCeEEEEEEeccCccc
Confidence 9988765 34899999999988653
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.12 E-value=5.6e-10 Score=117.52 Aligned_cols=163 Identities=17% Similarity=0.168 Sum_probs=112.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|... ...+..++.
T Consensus 25 l~~k~vlVTGas~GIG~ai----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~------------ 71 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRAT----AELFAK---------------NGAYVVVADVNED--AAVRVANEI------------ 71 (277)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESSHH--HHHHHHHHH------------
T ss_pred CCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHh------------
Confidence 5689999999644444333 233322 2567888887532 111111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 72 ----~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~ 141 (277)
T 4dqx_A 72 ----GSKAFGVRVDVSSA------KDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSK 141 (277)
T ss_dssp ----CTTEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----CCceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence 23688899999997 77777665 68999999996432 24566788999999999988
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+..++|++||...+.... ....|+.||...+.+
T Consensus 142 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l 183 (277)
T 4dqx_A 142 YVIPVMRRNGGGSIINTTSYTATSAIA--------------------------------------DRTAYVASKGAISSL 183 (277)
T ss_dssp HHHHHHTTTTCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEECchhhCcCCC--------------------------------------CChhHHHHHHHHHHH
Confidence 86432 2346999999987553210 016899999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..++||.|..+
T Consensus 184 ~~~la~e~~~~gi~vn~v~PG~v~T~ 209 (277)
T 4dqx_A 184 TRAMAMDHAKEGIRVNAVAPGTIDSP 209 (277)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence 8765 34899999999988764
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.1e-09 Score=116.31 Aligned_cols=169 Identities=12% Similarity=0.093 Sum_probs=114.5
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.-|.|. +..+.|... +.+|++..|... ..+.++++..
T Consensus 28 ~l~gk~~lVTGasg~~GIG~--aia~~la~~---------------G~~V~~~~r~~~---~~~~~~~~~~--------- 78 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAW--GIAKAAREA---------------GAELAFTYQGDA---LKKRVEPLAE--------- 78 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHH--HHHHHHHHT---------------TCEEEEEECSHH---HHHHHHHHHH---------
T ss_pred cCCCCEEEEEcCCCCCcHHH--HHHHHHHHC---------------CCEEEEEcCCHH---HHHHHHHHHH---------
Confidence 35689999999654422222 223334322 567888877633 2233333221
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----------hhhHHHHHHhhHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----------DAHLKVAVSINLRAT 312 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt 312 (782)
...++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+
T Consensus 79 ----~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~ 148 (293)
T 3grk_A 79 ----ELGAFVAGHCDVADA------ASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSL 148 (293)
T ss_dssp ----HHTCEEEEECCTTCH------HHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHH
T ss_pred ----hcCCceEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHH
Confidence 113578899999997 77777765 57999999997531 244567899999999
Q ss_pred HHHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 313 KALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 313 ~~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
..+++++... .+-.++|++||...+.... ....|+.||+..
T Consensus 149 ~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~ 190 (293)
T 3grk_A 149 TAVSRRAEKLMADGGSILTLTYYGAEKVMP--------------------------------------NYNVMGVAKAAL 190 (293)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECGGGTSBCT--------------------------------------TTTHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCEEEEEeehhhccCCC--------------------------------------chHHHHHHHHHH
Confidence 9999997653 2345899999987543210 016899999999
Q ss_pred HHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 392 EDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 392 E~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.+.+.. ..|+.+..++||.|..+.
T Consensus 191 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 220 (293)
T 3grk_A 191 EASVKYLAVDLGPQNIRVNAISAGPIKTLA 220 (293)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred HHHHHHHHHHHhHhCCEEEEEecCCCcchh
Confidence 9988765 348999999999888653
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.11 E-value=4.8e-10 Score=116.94 Aligned_cols=167 Identities=15% Similarity=0.151 Sum_probs=111.0
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
...+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 26 ~l~~k~vlITGas~gIG~~l----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~--------- 75 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAI----ARKLGS---------------LGARVVLTARDVEK--LRAVEREIVA--------- 75 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH---------
T ss_pred ccCCCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEECCHHH--HHHHHHHHHH---------
Confidence 35689999999544444333 233322 25678888886421 2222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----c----hhhHHHHHHhhHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----F----DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~L 315 (782)
...++.++.+|++++ +++..+++ .+|+|||+||... + .+.++..+++|+.|+.++
T Consensus 76 ----~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l 145 (262)
T 3rkr_A 76 ----AGGEAESHACDLSHS------DAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLL 145 (262)
T ss_dssp ----TTCEEEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHH
T ss_pred ----hCCceeEEEecCCCH------HHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence 124688999999987 77776665 4799999999721 1 244567899999999999
Q ss_pred HHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 316 LEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 316 le~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
++.+... .+..++|++||...+.... ....|+.||+..|
T Consensus 146 ~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~ 187 (262)
T 3rkr_A 146 LRAFAPAMIAAKRGHIINISSLAGKNPVA--------------------------------------DGAAYTASKWGLN 187 (262)
T ss_dssp HHHHHHHHHHTTCCEEEEECSSCSSCCCT--------------------------------------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCceEEEEechhhcCCCC--------------------------------------CCchHHHHHHHHH
Confidence 9886431 2567999999987542210 1168999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+++.. ..|+++.+++||.|..+
T Consensus 188 ~l~~~la~e~~~~gi~v~~v~PG~v~t~ 215 (262)
T 3rkr_A 188 GLMTSAAEELRQHQVRVSLVAPGSVRTE 215 (262)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCC---
T ss_pred HHHHHHHHHhhhcCcEEEEEecCCCcCC
Confidence 988765 35899999999988753
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.11 E-value=9.9e-10 Score=116.23 Aligned_cols=170 Identities=14% Similarity=0.166 Sum_probs=113.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|...- ....+|++..|.... ..+..+++.. .
T Consensus 31 l~~k~~lVTGas~GIG~ai----a~~l~~~G------------~~~~~V~~~~r~~~~--~~~~~~~l~~---------~ 83 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKAT----ALEYLEAS------------NGDMKLILAARRLEK--LEELKKTIDQ---------E 83 (287)
T ss_dssp HTTCEEEEESTTSHHHHHH----HHHHHHHH------------TTCSEEEEEESCHHH--HHHHHHHHHH---------H
T ss_pred cCCCEEEEecCCChHHHHH----HHHHHHcC------------CCCceEEEEECCHHH--HHHHHHHHHh---------h
Confidence 5689999999654444333 23332210 011277777775321 2222222211 0
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----c----hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----F----DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~Ll 316 (782)
. ...++.++.+|++++ ++++.+++ .+|++||+||... + .+.++..+++|+.|+.+++
T Consensus 84 ~--~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 155 (287)
T 3rku_A 84 F--PNAKVHVAQLDITQA------EKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINIT 155 (287)
T ss_dssp C--TTCEEEEEECCTTCG------GGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHH
T ss_pred C--CCCeEEEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 0 124788999999998 77877776 4799999999643 1 2456678999999999999
Q ss_pred HHHH----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMAK----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+++. +. +..++|++||....... +....|+.||...+
T Consensus 156 ~~~~~~m~~~-~~g~IV~isS~~~~~~~--------------------------------------~~~~~Y~asKaa~~ 196 (287)
T 3rku_A 156 QAVLPIFQAK-NSGDIVNLGSIAGRDAY--------------------------------------PTGSIYCASKFAVG 196 (287)
T ss_dssp HHHHHHHHHH-TCCEEEEECCGGGTSCC--------------------------------------TTCHHHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCeEEEECChhhcCCC--------------------------------------CCCchHHHHHHHHH
Confidence 9873 32 56799999998654221 01167999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+.+..++||.|..+
T Consensus 197 ~l~~~la~e~~~~gIrvn~v~PG~v~T~ 224 (287)
T 3rku_A 197 AFTDSLRKELINTKIRVILIAPGLVETE 224 (287)
T ss_dssp HHHHHHHHHTTTSSCEEEEEEESCEESS
T ss_pred HHHHHHHHHhhhcCCEEEEEeCCcCcCc
Confidence 888765 35899999999998764
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.11 E-value=7.9e-10 Score=115.12 Aligned_cols=167 Identities=17% Similarity=0.191 Sum_probs=109.6
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|... +.+|++..|.... ...+...++..
T Consensus 6 l~~k~vlVTGas~GIG~ai----a~~la~~---------------G~~V~~~~~~~~~-~~~~~~~~~~~---------- 55 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRAC----AIRFAQE---------------GANVVLTYNGAAE-GAATAVAEIEK---------- 55 (259)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHHT---------------TCEEEEEECSSCH-HHHHHHHHHHT----------
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHHC---------------CCEEEEEcCCCHH-HHHHHHHHHHh----------
Confidence 4589999999644443332 3333322 5677776443321 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----c----hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----F----DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++++.+++ .+|++||+||... + .+.++..+++|+.|+.+++
T Consensus 56 ---~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~ 126 (259)
T 3edm_A 56 ---LGRSALAIKADLTNA------AEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTA 126 (259)
T ss_dssp ---TTSCCEEEECCTTCH------HHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---cCCceEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHH
Confidence 123688999999998 77777765 6899999998641 1 1345678999999999999
Q ss_pred HHHHHc-cCCceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 317 EMAKEM-KQLKSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 317 e~a~~~-~~~~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+++... ..-.++|++||...+ ... +....|+.||...+.+
T Consensus 127 ~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~~Y~asKaa~~~l 168 (259)
T 3edm_A 127 KTALPKMAKGGAIVTFSSQAGRDGGG--------------------------------------PGALAYATSKGAVMTF 168 (259)
T ss_dssp HHHGGGEEEEEEEEEECCHHHHHCCS--------------------------------------TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEEEcCHHhccCCC--------------------------------------CCcHHHHHHHHHHHHH
Confidence 998754 112389999998765 210 0116799999999998
Q ss_pred HHHc----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..++.+..++||.|..+
T Consensus 169 ~~~la~e~~~~I~vn~v~PG~v~T~ 193 (259)
T 3edm_A 169 TRGLAKEVGPKIRVNAVCPGMISTT 193 (259)
T ss_dssp HHHHHHHHTTTCEEEEEEECCBCC-
T ss_pred HHHHHHHHCCCCEEEEEEECCCcCc
Confidence 8765 34588888999887654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.11 E-value=2.4e-10 Score=119.92 Aligned_cols=167 Identities=17% Similarity=0.140 Sum_probs=111.1
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 28 ~l~~k~vlITGasggIG~~l----a~~L~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~--------- 77 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLT----AYEFAK---------------LKSKLVLWDINKHG--LEETAAKCKG--------- 77 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH---------
T ss_pred ccCCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEEcCHHH--HHHHHHHHHh---------
Confidence 35689999999544443332 233322 25678888886421 1222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++++++++ ++|+|||+||..... +.++..+++|+.|+.+++
T Consensus 78 ----~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 147 (272)
T 1yb1_A 78 ----LGAKVHTFVVDCSNR------EDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 147 (272)
T ss_dssp ----TTCCEEEEECCTTCH------HHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHH
T ss_pred ----cCCeEEEEEeeCCCH------HHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHH
Confidence 113788999999987 67766665 689999999975421 345578899999988877
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+... .+..++|++||..++.... ....|+.||...|.
T Consensus 148 ~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~ 189 (272)
T 1yb1_A 148 KAFLPAMTKNNHGHIVTVASAAGHVSVP--------------------------------------FLLAYCSSKFAAVG 189 (272)
T ss_dssp HHHHHHHHHTTCEEEEEECCCC-CCCHH--------------------------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEechhhcCCCC--------------------------------------CchhHHHHHHHHHH
Confidence 775431 2578999999987653210 00679999999999
Q ss_pred HHHHc--------CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG--------GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~--------~~glp~~IvRp~~v~G~ 415 (782)
+++.+ ..|+++.++|||.+.++
T Consensus 190 l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~ 219 (272)
T 1yb1_A 190 FHKTLTDELAALQITGVKTTCLCPNFVNTG 219 (272)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred HHHHHHHHHHHhCCCCeEEEEEeCCcccCC
Confidence 88765 23899999999987653
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.11 E-value=6.7e-10 Score=115.50 Aligned_cols=166 Identities=19% Similarity=0.215 Sum_probs=112.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... ..+...++..
T Consensus 4 l~~k~vlVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~---------- 52 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGM----ATRFAK---------------EGARVVITGRTKEK--LEEAKLEIEQ---------- 52 (257)
T ss_dssp TTTCEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHCC----------
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh----------
Confidence 4579999999544433332 233332 25678888886431 2222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 53 ---~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~ 123 (257)
T 3imf_A 53 ---FPGQILTVQMDVRNT------DDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQ 123 (257)
T ss_dssp ---STTCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cCCcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 124788999999997 77777665 67999999996422 24456789999999999999
Q ss_pred HHHH----ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKE----MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~----~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
++.. .++..++|++||........ ....|+.||...+.
T Consensus 124 ~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~ 165 (257)
T 3imf_A 124 AIGKYWIEKGIKGNIINMVATYAWDAGP--------------------------------------GVIHSAAAKAGVLA 165 (257)
T ss_dssp HHHHHHHHHTCCCEEEEECCGGGGSCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCcEEEEECchhhccCCC--------------------------------------CcHHHHHHHHHHHH
Confidence 8732 23467899999986543210 11679999999988
Q ss_pred HHHHc----C--CCCcEEEecCCeEEec
Q psy16243 394 MVRRG----G--AGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~----~--~glp~~IvRp~~v~G~ 415 (782)
+.+.. . .|+++..++||.|.++
T Consensus 166 l~~~la~e~~~~~gIrvn~v~PG~v~t~ 193 (257)
T 3imf_A 166 MTKTLAVEWGRKYGIRVNAIAPGPIERT 193 (257)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCBSSC
T ss_pred HHHHHHHHhccccCeEEEEEEECCCcCC
Confidence 87654 2 3899999999998765
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.11 E-value=4.9e-10 Score=117.27 Aligned_cols=110 Identities=19% Similarity=0.246 Sum_probs=82.9
Q ss_pred EEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH----HHc
Q psy16243 261 AVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA----KEM 322 (782)
Q Consensus 261 ~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a----~~~ 322 (782)
.+.+|++++ ++.+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++ ++.
T Consensus 70 ~~~~Dv~~~------~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 143 (266)
T 3uxy_A 70 HLPGDLREA------AYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA 143 (266)
T ss_dssp ECCCCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred ccCcCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 347888886 55555544 68999999997542 2445678899999999999987 333
Q ss_pred cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----
Q psy16243 323 KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG---- 398 (782)
Q Consensus 323 ~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~---- 398 (782)
+..++|++||...+.... ....|+.||...|.+.+..
T Consensus 144 -~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~ 184 (266)
T 3uxy_A 144 -GGGAIVNVASCWGLRPGP--------------------------------------GHALYCLTKAALASLTQCMGMDH 184 (266)
T ss_dssp -TCEEEEEECCSBTTBCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCcEEEEECCHHhCCCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHh
Confidence 567999999986543210 0167999999999988765
Q ss_pred -CCCCcEEEecCCeEEec
Q psy16243 399 -GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -~~glp~~IvRp~~v~G~ 415 (782)
..|+.+.+++||.|.++
T Consensus 185 ~~~gI~vn~v~PG~v~T~ 202 (266)
T 3uxy_A 185 APQGIRINAVCPNEVNTP 202 (266)
T ss_dssp GGGTEEEEEEEESSBCCH
T ss_pred hhcCcEEEEEeeCCCcch
Confidence 34899999999999875
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.11 E-value=8.7e-10 Score=115.98 Aligned_cols=170 Identities=15% Similarity=0.160 Sum_probs=114.5
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|.... ..+..+++..
T Consensus 29 ~l~gk~~lVTGas~GIG~ai----a~~la~---------------~G~~V~~~~r~~~~--~~~~~~~~~~--------- 78 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKV----ALAYAE---------------AGAQVAVAARHSDA--LQVVADEIAG--------- 78 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHH----HHHHHH---------------TTCEEEEEESSGGG--GHHHHHHHHH---------
T ss_pred CCCCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh---------
Confidence 35689999999644443332 233322 25678888886432 2222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
.-.++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+..++
T Consensus 79 ----~~~~~~~~~~Dl~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 148 (276)
T 3r1i_A 79 ----VGGKALPIRCDVTQP------DQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTA 148 (276)
T ss_dssp ----TTCCCEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ----cCCeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 123788999999998 77777776 68999999997543 2445677899999999999
Q ss_pred HHHHHc----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMAKEM----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a~~~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+++... +.-.++|++||.+.+.... + .....|+.||...+
T Consensus 149 ~~~~~~m~~~~~~g~iv~isS~~~~~~~~--------~----------------------------~~~~~Y~asKaa~~ 192 (276)
T 3r1i_A 149 QAAARAMVDQGLGGTIITTASMSGHIINI--------P----------------------------QQVSHYCTSKAAVV 192 (276)
T ss_dssp HHHHHHHHHHTSCEEEEEECCGGGTSCCC--------S----------------------------SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcEEEEECchHhcccCC--------C----------------------------CCcchHHHHHHHHH
Confidence 886532 1236899999986542210 0 01167999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+.+.. ..|+.+..++||.|..+.
T Consensus 193 ~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 221 (276)
T 3r1i_A 193 HLTKAMAVELAPHQIRVNSVSPGYIRTEL 221 (276)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCSTT
T ss_pred HHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence 988765 258999999999887643
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.11 E-value=1e-09 Score=115.87 Aligned_cols=168 Identities=19% Similarity=0.157 Sum_probs=113.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+.+|..+ .+.|... +.+|+++.|... ...+...++..
T Consensus 26 ~~~k~~lVTGas~GIG~ai----a~~la~~---------------G~~V~~~~r~~~--~~~~~~~~l~~---------- 74 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRAT----ALALAAD---------------GVTVGALGRTRT--EVEEVADEIVG---------- 74 (283)
T ss_dssp -CCCEEEEESCSSHHHHHH----HHHHHHT---------------TCEEEEEESSHH--HHHHHHHHHTT----------
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHHC---------------CCEEEEEeCCHH--HHHHHHHHHHh----------
Confidence 4578999999644433332 2333322 567888887642 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+..++
T Consensus 75 ---~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 145 (283)
T 3v8b_A 75 ---AGGQAIALEADVSDE------LQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTL 145 (283)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHH
T ss_pred ---cCCcEEEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHH
Confidence 124788999999997 77776665 68999999997432 1345678999999999999
Q ss_pred HHH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+++ ++. +..++|++||........ . +....|+.||...+
T Consensus 146 ~~~~~~m~~~-~~g~Iv~isS~~~~~~~~-------------------------------~-----~~~~~Y~asKaa~~ 188 (283)
T 3v8b_A 146 HLTVPYLKQR-GGGAIVVVSSINGTRTFT-------------------------------T-----PGATAYTATKAAQV 188 (283)
T ss_dssp HHHHHHHHHH-TCEEEEEECCSBTTTBCC-------------------------------S-----TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCceEEEEcChhhccCCC-------------------------------C-----CCchHHHHHHHHHH
Confidence 987 333 567999999986542100 0 01168999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+.+.. ..|+.+..++||.|..+.
T Consensus 189 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 217 (283)
T 3v8b_A 189 AIVQQLALELGKHHIRVNAVCPGAIETNI 217 (283)
T ss_dssp HHHHHHHHHTTTTTEEEEEEEECSBSSCT
T ss_pred HHHHHHHHHhCccCcEEEEEEeCCCcCCc
Confidence 988765 358999999999887643
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.11 E-value=8.8e-10 Score=115.26 Aligned_cols=167 Identities=17% Similarity=0.190 Sum_probs=112.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|.... ..+..+++..
T Consensus 18 l~~k~vlVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~---------- 66 (266)
T 4egf_A 18 LDGKRALITGATKGIGADI----ARAFAA---------------AGARLVLSGRDVSE--LDAARRALGE---------- 66 (266)
T ss_dssp CTTCEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHH----------
Confidence 5689999999644433332 233322 25678888885331 2222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
....++.++.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+..+++
T Consensus 67 --~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 138 (266)
T 4egf_A 67 --QFGTDVHTVAIDLAEP------DAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLAS 138 (266)
T ss_dssp --HHCCCEEEEECCTTST------THHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred --hcCCcEEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 0124789999999998 66666655 68999999997532 23456788999999999998
Q ss_pred HHHHc----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKEM----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
++... +.-.++|++||...+.... ....|+.||...+.
T Consensus 139 ~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~ 180 (266)
T 4egf_A 139 AVGKAMVAAGEGGAIITVASAAALAPLP--------------------------------------DHYAYCTSKAGLVM 180 (266)
T ss_dssp HHHHHHHHHTSCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEEcchhhccCCC--------------------------------------CChHHHHHHHHHHH
Confidence 86432 2246899999987653210 11679999999998
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+.+..++||.|..+
T Consensus 181 l~~~la~e~~~~gI~vn~v~PG~v~T~ 207 (266)
T 4egf_A 181 ATKVLARELGPHGIRANSVCPTVVLTE 207 (266)
T ss_dssp HHHHHHHHHGGGTEEEEEEEESCBCSH
T ss_pred HHHHHHHHHhhhCeEEEEEEeCCCcCc
Confidence 88765 34899999999988764
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=2e-09 Score=114.39 Aligned_cols=168 Identities=14% Similarity=0.084 Sum_probs=114.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.. |+..+..+.|... +.+|++..|..... +.+.+....
T Consensus 28 l~~k~vlVTGasg~~--GIG~~ia~~la~~---------------G~~V~~~~r~~~~~---~~~~~~~~~--------- 78 (296)
T 3k31_A 28 MEGKKGVIIGVANDK--SLAWGIAKAVCAQ---------------GAEVALTYLSETFK---KRVDPLAES--------- 78 (296)
T ss_dssp TTTCEEEEECCCSTT--SHHHHHHHHHHHT---------------TCEEEEEESSGGGH---HHHHHHHHH---------
T ss_pred cCCCEEEEEeCCCCC--CHHHHHHHHHHHC---------------CCEEEEEeCChHHH---HHHHHHHHh---------
Confidence 568999999954311 3322223444322 56788888874322 223322110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----------hhhHHHHHHhhHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----------DAHLKVAVSINLRATK 313 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~ 313 (782)
..++.++.+|++++ ++++++++ .+|++||+||.... .+.+...+++|+.|+.
T Consensus 79 ----~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~ 148 (296)
T 3k31_A 79 ----LGVKLTVPCDVSDA------ESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFT 148 (296)
T ss_dssp ----HTCCEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred ----cCCeEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHH
Confidence 12467899999997 77777765 57999999997532 1345678999999999
Q ss_pred HHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 314 ALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 314 ~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
++++.+... ..-.++|++||...+.... ....|+.||...+
T Consensus 149 ~l~~~~~~~m~~~g~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~ 190 (296)
T 3k31_A 149 YIASKAEPLMTNGGSILTLSYYGAEKVVP--------------------------------------HYNVMGVCKAALE 190 (296)
T ss_dssp HHHHHHGGGCTTCEEEEEEECGGGTSCCT--------------------------------------TTTHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCEEEEEEehhhccCCC--------------------------------------CchhhHHHHHHHH
Confidence 999998753 2235899999986543210 1168999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.+.+.. ..|+.+..++||.|..+.
T Consensus 191 ~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 219 (296)
T 3k31_A 191 ASVKYLAVDLGKQQIRVNAISAGPVRTLA 219 (296)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECCCCCSS
T ss_pred HHHHHHHHHHhhcCcEEEEEEECCCcCch
Confidence 988765 358999999999988753
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.11 E-value=3.6e-10 Score=118.57 Aligned_cols=167 Identities=13% Similarity=0.126 Sum_probs=113.4
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|... +.+|+++.|... ...+..+++..
T Consensus 23 ~l~gk~~lVTGas~gIG~ai----a~~la~~---------------G~~V~~~~r~~~--~~~~~~~~l~~--------- 72 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAM----AEGLAVA---------------GARILINGTDPS--RVAQTVQEFRN--------- 72 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHH----HHHHHHT---------------TCEEEECCSCHH--HHHHHHHHHHH---------
T ss_pred CCCCCEEEEeCCCcHHHHHH----HHHHHHC---------------CCEEEEEeCCHH--HHHHHHHHHHh---------
Confidence 35689999999544443333 2333322 567887777532 22222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
.-.++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.+++
T Consensus 73 ----~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 142 (271)
T 4ibo_A 73 ----VGHDAEAVAFDVTSE------SEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIG 142 (271)
T ss_dssp ----TTCCEEECCCCTTCH------HHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ----cCCceEEEEcCCCCH------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHH
Confidence 123688999999987 77777766 68999999997532 2445678999999999998
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+++... .+..++|++||....... +....|+.||...+.
T Consensus 143 ~~~~~~~~~~~~g~iV~isS~~~~~~~--------------------------------------~~~~~Y~asKaa~~~ 184 (271)
T 4ibo_A 143 REAAKRMIPRGYGKIVNIGSLTSELAR--------------------------------------ATVAPYTVAKGGIKM 184 (271)
T ss_dssp HHHHHHHHHHTCEEEEEECCGGGTSBC--------------------------------------TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEEEccHHhCCCC--------------------------------------CCchhHHHHHHHHHH
Confidence 876432 245689999997643221 011679999999999
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+++..++||.|..+
T Consensus 185 l~~~la~e~~~~gI~vn~v~PG~v~T~ 211 (271)
T 4ibo_A 185 LTRAMAAEWAQYGIQANAIGPGYMLTD 211 (271)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCSG
T ss_pred HHHHHHHHHhhhCeEEEEEEeccEeCc
Confidence 88765 35899999999988764
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.10 E-value=4.7e-10 Score=117.10 Aligned_cols=170 Identities=14% Similarity=0.178 Sum_probs=109.3
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|........+.+.+...
T Consensus 8 ~l~~k~vlVTGas~GIG~ai----a~~la~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~--------- 59 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALT----AKTFAL---------------ESVNLVLHYHQAKDSDTANKLKDELE--------- 59 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHH----HHHHTT---------------SSCEEEEEESCGGGHHHHHHHHHHHH---------
T ss_pred CCCCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEecCccCHHHHHHHHHHHH---------
Confidence 35689999999544333322 233322 26678888775433322222222111
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
....++.++.+|++++ ++.+.+++ .+|++||+||.... .+.++..+++|+.|+..++
T Consensus 60 ---~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 130 (262)
T 3ksu_A 60 ---DQGAKVALYQSDLSNE------EEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFI 130 (262)
T ss_dssp ---TTTCEEEEEECCCCSH------HHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---hcCCcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence 1124788999999997 77777765 68999999996432 2445678899999999999
Q ss_pred HHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 317 EMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 317 e~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+.+... .+-.++|++||....... + ....|+.||...+.+.
T Consensus 131 ~~~~~~m~~~g~iv~isS~~~~~~~---------------------------------~-----~~~~Y~asKaa~~~l~ 172 (262)
T 3ksu_A 131 KQAAKHMNPNGHIITIATSLLAAYT---------------------------------G-----FYSTYAGNKAPVEHYT 172 (262)
T ss_dssp HHHHTTEEEEEEEEEECCCHHHHHH---------------------------------C-----CCCC-----CHHHHHH
T ss_pred HHHHHhhcCCCEEEEEechhhccCC---------------------------------C-----CCchhHHHHHHHHHHH
Confidence 998753 234689999998654321 0 0157999999999888
Q ss_pred HHc-----CCCCcEEEecCCeEEec
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.. ..|+.+..++||.|..+
T Consensus 173 ~~la~e~~~~gi~vn~v~PG~v~T~ 197 (262)
T 3ksu_A 173 RAASKELMKQQISVNAIAPGPMDTS 197 (262)
T ss_dssp HHHHHHTTTTTCEEEEEEECCCCTH
T ss_pred HHHHHHHHHcCcEEEEEeeCCCcCc
Confidence 765 34899999999887643
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.10 E-value=8.1e-10 Score=118.66 Aligned_cols=115 Identities=18% Similarity=0.163 Sum_probs=88.2
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+..+++++...
T Consensus 107 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 180 (317)
T 3oec_A 107 RRIIARQADVRDL------ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPS 180 (317)
T ss_dssp CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4788999999997 77777765 68999999997532 2456678999999999999986432
Q ss_pred ----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 323 ----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 323 ----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
+.-.++|++||...+.... ....|+.||...+.+.+..
T Consensus 181 m~~~~~~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~l 222 (317)
T 3oec_A 181 MIERGQGGSVIFVSSTVGLRGAP--------------------------------------GQSHYAASKHGVQGLMLSL 222 (317)
T ss_dssp HHHTCSCEEEEEECCGGGSSCCT--------------------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCEEEEECcHHhcCCCC--------------------------------------CCcchHHHHHHHHHHHHHH
Confidence 2246799999986543210 0167999999999988766
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..|+.+..++||.|.++
T Consensus 223 a~e~~~~gI~vn~v~PG~v~T~ 244 (317)
T 3oec_A 223 ANEVGRHNIRVNSVNPGAVNTE 244 (317)
T ss_dssp HHHHGGGTEEEEEEEECSBSSH
T ss_pred HHHHhhcCeEEEEEecCcccCc
Confidence 24899999999998875
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.10 E-value=6.1e-10 Score=114.92 Aligned_cols=162 Identities=14% Similarity=0.183 Sum_probs=111.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ++++..+
T Consensus 4 l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~------~~~~~~~---------- 48 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAA----ALAFAR---------------EGAKVIATDINES------KLQELEK---------- 48 (246)
T ss_dssp TTTCEEEESSTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH------HHGGGGG----------
T ss_pred CCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEECCHH------HHHHHHh----------
Confidence 3478999999544444332 233322 2567888887532 2222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh---cCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV---DNIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~---~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
..++.++.+|++++ ++++++. ..+|++||+|+.... .+.++..+++|+.|+.++++++..
T Consensus 49 ----~~~~~~~~~D~~~~------~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~ 118 (246)
T 2ag5_A 49 ----YPGIQTRVLDVTKK------KQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLP 118 (246)
T ss_dssp ----STTEEEEECCTTCH------HHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ----ccCceEEEeeCCCH------HHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12678899999987 6666654 468999999997543 244567889999999999998653
Q ss_pred c---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 322 M---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 322 ~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
. .+..++|++||...+.... + ....|+.||+..|.+.+..
T Consensus 119 ~~~~~~~g~iv~isS~~~~~~~~--------~-----------------------------~~~~Y~~sK~a~~~~~~~l 161 (246)
T 2ag5_A 119 KMLAQKSGNIINMSSVASSVKGV--------V-----------------------------NRCVYSTTKAAVIGLTKSV 161 (246)
T ss_dssp HHHHHTCEEEEEECCSBTTTBCC--------T-----------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCceEEEEechHhCcCCC--------C-----------------------------CCccHHHHHHHHHHHHHHH
Confidence 1 2568999999986543210 0 0167999999999998776
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..|+++.++|||.+.++
T Consensus 162 a~e~~~~gi~v~~v~Pg~v~t~ 183 (246)
T 2ag5_A 162 AADFIQQGIRCNCVCPGTVDTP 183 (246)
T ss_dssp HHHHGGGTEEEEEEEESCEECH
T ss_pred HHHhhhcCcEEEEEeeCcCcCc
Confidence 24899999999999985
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.10 E-value=6.6e-10 Score=115.27 Aligned_cols=168 Identities=16% Similarity=0.154 Sum_probs=108.8
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
....+|+++|||..+..|..+ .+.|... +.+|++..|..... ..+.+.++..
T Consensus 9 ~~~~~k~vlITGas~giG~~i----a~~l~~~---------------G~~v~~~~~~~~~~-~~~~~~~~~~-------- 60 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGGIGTSI----CQRLHKD---------------GFRVVAGCGPNSPR-RVKWLEDQKA-------- 60 (256)
T ss_dssp ----CEEEEETTTTSHHHHHH----HHHHHHT---------------TEEEEEEECTTCSS-HHHHHHHHHH--------
T ss_pred CCCCCCEEEEECCCChHHHHH----HHHHHHC---------------CCEEEEEeCCCHHH-HHHHHHHHHh--------
Confidence 345689999999644444333 2333322 45677666332211 1222222211
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHH
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~L 315 (782)
...++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.++
T Consensus 61 -----~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l 129 (256)
T 3ezl_A 61 -----LGFDFYASEGNVGDW------DSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNV 129 (256)
T ss_dssp -----TTCCCEEEECCTTCH------HHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHH
T ss_pred -----cCCeeEEEecCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHH
Confidence 124688999999987 77776665 67999999997532 245667899999998888
Q ss_pred HHHH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 316 LEMA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 316 le~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
++.+ ++. +..++|++||...+.... ....|+.||...
T Consensus 130 ~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~ 170 (256)
T 3ezl_A 130 TKQVIDGMVER-GWGRIINISSVNGQKGQF--------------------------------------GQTNYSTAKAGI 170 (256)
T ss_dssp HHHHHHHHHHH-TCEEEEEECCCCGGGSCS--------------------------------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCEEEEEcchhhccCCC--------------------------------------CCcccHHHHHHH
Confidence 7765 333 567899999986543210 116899999988
Q ss_pred HHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 392 EDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 392 E~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.+.. ..|+.+.+++||.|..+
T Consensus 171 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 199 (256)
T 3ezl_A 171 HGFTMSLAQEVATKGVTVNTVSPGYIGTD 199 (256)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHhCCEEEEEEECcccCc
Confidence 8887665 35899999999988764
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.1e-09 Score=114.02 Aligned_cols=161 Identities=16% Similarity=0.195 Sum_probs=108.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... ..+.+.+
T Consensus 25 l~~k~vlVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~------------- 70 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHC----ALRLLE---------------HGHRVIISYRTEHA--SVTELRQ------------- 70 (260)
T ss_dssp --CCCEEESSTTSHHHHHH----HHHHHH---------------TTCCEEEEESSCCH--HHHHHHH-------------
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEeCChHH--HHHHHHh-------------
Confidence 4579999999544333322 233322 25678888886542 1222221
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch------hhHHHHHHhhHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD------AHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~------~~~~~~~~~Nv~gt~~Lle~ 318 (782)
.++.++.+|++++ ++++.+++ .+|++||+||..... +.++..+++|+.|+.++++.
T Consensus 71 -----~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~ 139 (260)
T 3gem_A 71 -----AGAVALYGDFSCE------TGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLH 139 (260)
T ss_dssp -----HTCEEEECCTTSH------HHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHH
T ss_pred -----cCCeEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1367899999987 77777665 579999999964321 33456889999999999998
Q ss_pred HHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+... .+..++|++||...+.... ....|+.||...|.+.
T Consensus 140 ~~~~m~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~ 181 (260)
T 3gem_A 140 CEPLLTASEVADIVHISDDVTRKGSS--------------------------------------KHIAYCATKAGLESLT 181 (260)
T ss_dssp HHHHHHTSSSCEEEEECCGGGGTCCS--------------------------------------SCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcEEEEECChhhcCCCC--------------------------------------CcHhHHHHHHHHHHHH
Confidence 7532 2457899999986543210 1168999999999888
Q ss_pred HHc----CCCCcEEEecCCeEEec
Q psy16243 396 RRG----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~----~~glp~~IvRp~~v~G~ 415 (782)
+.. ..++.+..++||.+..+
T Consensus 182 ~~la~e~~~~Irvn~v~PG~v~t~ 205 (260)
T 3gem_A 182 LSFAARFAPLVKVNGIAPALLMFQ 205 (260)
T ss_dssp HHHHHHHTTTCEEEEEEECTTCC-
T ss_pred HHHHHHHCCCCEEEEEeecccccC
Confidence 765 34799999999887654
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=1.7e-09 Score=110.66 Aligned_cols=165 Identities=19% Similarity=0.158 Sum_probs=109.9
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+..|..+ .+.|.. .+.+|++..|.... ..+..+++.+
T Consensus 2 ~k~vlITGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~------------ 48 (235)
T 3l77_A 2 MKVAVITGASRGIGEAI----ARALAR---------------DGYALALGARSVDR--LEKIAHELMQ------------ 48 (235)
T ss_dssp CCEEEEESCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH------------
T ss_pred CCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh------------
Confidence 58899999544333332 333332 25678888886431 2222222210
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
....++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 49 ~~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 122 (235)
T 3l77_A 49 EQGVEVFYHHLDVSKA------ESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF 122 (235)
T ss_dssp HHCCCEEEEECCTTCH------HHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred hcCCeEEEEEeccCCH------HHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1124788999999998 78887776 67999999997532 2445678999999999999987
Q ss_pred HHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 320 KEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 320 ~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
... ++-.++|++||....... +....|+.||+..+.+.+.
T Consensus 123 ~~~~~~~~~~ii~~sS~~~~~~~--------------------------------------~~~~~Y~~sKaa~~~~~~~ 164 (235)
T 3l77_A 123 LDSLKRTGGLALVTTSDVSARLI--------------------------------------PYGGGYVSTKWAARALVRT 164 (235)
T ss_dssp HHHHHHHTCEEEEECCGGGSSCC--------------------------------------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCcEEEEecchhcccC--------------------------------------CCcchHHHHHHHHHHHHHH
Confidence 542 123567777776433210 1116799999999999887
Q ss_pred c---CCCCcEEEecCCeEEec
Q psy16243 398 G---GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 398 ~---~~glp~~IvRp~~v~G~ 415 (782)
. ..++.+..++||.|..+
T Consensus 165 l~~~~~~i~v~~v~PG~v~T~ 185 (235)
T 3l77_A 165 FQIENPDVRFFELRPGAVDTY 185 (235)
T ss_dssp HHHHCTTSEEEEEEECSBSSS
T ss_pred HhhcCCCeEEEEEeCCccccc
Confidence 5 46899999999887643
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.09 E-value=4.3e-10 Score=117.44 Aligned_cols=162 Identities=17% Similarity=0.151 Sum_probs=110.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ++++..+.
T Consensus 4 l~~k~vlITGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~------~~~~~~~~--------- 49 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAA----LDLFAR---------------EGASLVAVDREER------LLAEAVAA--------- 49 (263)
T ss_dssp TTTCEEEEESTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH------HHHHHHHT---------
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHH------HHHHHHHH---------
Confidence 3478999999644444332 233322 2567888888632 12221110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 50 ---~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 120 (263)
T 2a4k_A 50 ---LEAEAIAVVADVSDP------KAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR 120 (263)
T ss_dssp ---CCSSEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred ---hcCceEEEEcCCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 013688899999987 77777665 46999999997532 13456788999999999999
Q ss_pred HHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 318 MAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 318 ~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
++... ++..++|++||...++.+ . ...|+.||...+.+.+
T Consensus 121 ~~~~~~~~~g~iv~isS~~~~~~~----~-----------------------------------~~~Y~asK~a~~~~~~ 161 (263)
T 2a4k_A 121 KAGEVLEEGGSLVLTGSVAGLGAF----G-----------------------------------LAHYAAGKLGVVGLAR 161 (263)
T ss_dssp HHHHHCCTTCEEEEECCCTTCCHH----H-----------------------------------HHHHHHCSSHHHHHHH
T ss_pred HHHHHHhcCCEEEEEecchhcCCC----C-----------------------------------cHHHHHHHHHHHHHHH
Confidence 98764 124589999998765210 0 0579999998887776
Q ss_pred Hc-----CCCCcEEEecCCeEEec
Q psy16243 397 RG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~ 415 (782)
.. ..|+.+.++|||.|.++
T Consensus 162 ~la~e~~~~gi~v~~v~PG~v~t~ 185 (263)
T 2a4k_A 162 TLALELARKGVRVNVLLPGLIQTP 185 (263)
T ss_dssp HHHHHHTTTTCEEEEEEECSBCCG
T ss_pred HHHHHhhhhCcEEEEEEeCcCcCc
Confidence 54 35899999999999875
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.08 E-value=7.5e-10 Score=115.05 Aligned_cols=164 Identities=16% Similarity=0.170 Sum_probs=112.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|++..|... ..+.+.+..
T Consensus 6 l~gk~~lVTGas~gIG~a~----a~~l~~---------------~G~~V~~~~r~~~---~~~~~~~~~----------- 52 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLAT----VRRLVE---------------GGAEVLLTGRNES---NIARIREEF----------- 52 (255)
T ss_dssp TTTCEEEEETCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHH---HHHHHHHHH-----------
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHH---HHHHHHHHh-----------
Confidence 4589999999544333322 233322 2567888888532 112221111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++.+.+++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 53 ----~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 122 (255)
T 4eso_A 53 ----GPRVHALRSDIADL------NEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQ 122 (255)
T ss_dssp ----GGGEEEEECCTTCH------HHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----CCcceEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence 13788999999987 66666554 67999999997532 24456789999999999999
Q ss_pred HHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 318 MAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 318 ~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
++... ..-.++|++||...+...+ ....|+.||...+.+.+
T Consensus 123 ~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~ 164 (255)
T 4eso_A 123 RLTPLIREGGSIVFTSSVADEGGHP--------------------------------------GMSVYSASKAALVSFAS 164 (255)
T ss_dssp HHGGGEEEEEEEEEECCGGGSSBCT--------------------------------------TBHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCEEEEECChhhcCCCC--------------------------------------CchHHHHHHHHHHHHHH
Confidence 98653 2235899999987543210 01689999999998887
Q ss_pred Hc-----CCCCcEEEecCCeEEecc
Q psy16243 397 RG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.. ..|+.+..++||.|..+.
T Consensus 165 ~la~e~~~~gi~vn~v~PG~v~T~~ 189 (255)
T 4eso_A 165 VLAAELLPRGIRVNSVSPGFIDTPT 189 (255)
T ss_dssp HHHHHTGGGTCEEEEEEECSBCCSS
T ss_pred HHHHHHhhhCcEEEEEecCcccCcc
Confidence 65 348999999999988753
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.08 E-value=7.6e-10 Score=116.42 Aligned_cols=164 Identities=14% Similarity=0.159 Sum_probs=110.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++..
T Consensus 27 l~~k~vlVTGas~gIG~ai----a~~L~~---------------~G~~V~~~~r~~~--~~~~~~~~l~~---------- 75 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMI----AQGLLE---------------AGARVFICARDAE--ACADTATRLSA---------- 75 (276)
T ss_dssp CTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEECSCHH--HHHHHHHHHTT----------
T ss_pred CCCCEEEEeCCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHh----------
Confidence 4579999999544443332 233322 2567888888632 12222222210
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 76 ----~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 145 (276)
T 2b4q_A 76 ----YGDCQAIPADLSSE------AGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQ 145 (276)
T ss_dssp ----SSCEEECCCCTTSH------HHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHH
T ss_pred ----cCceEEEEeeCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 12678899999987 77776665 68999999996432 24566789999999988887
Q ss_pred HHH----HccCC----ceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCc-cHHHHH
Q psy16243 318 MAK----EMKQL----KSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPN-TYALTK 388 (782)
Q Consensus 318 ~a~----~~~~~----~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn-~Y~~SK 388 (782)
++. +. +. .++|++||...+.... ... .|+.||
T Consensus 146 ~~~~~m~~~-~~~~~~g~iV~isS~~~~~~~~--------------------------------------~~~~~Y~asK 186 (276)
T 2b4q_A 146 QLLPLLRRS-ASAENPARVINIGSVAGISAMG--------------------------------------EQAYAYGPSK 186 (276)
T ss_dssp HHHHHHHHH-CCSSSCEEEEEECCGGGTCCCC--------------------------------------CSCTTHHHHH
T ss_pred HHHHHHHhc-cCCCCCCEEEEECCHHHcCCCC--------------------------------------CCccccHHHH
Confidence 754 22 33 7999999987653210 013 799999
Q ss_pred HHHHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 389 QVAEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 389 ~~aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
...|.+.+.. ..|+++.+++||.+..+
T Consensus 187 ~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~ 218 (276)
T 2b4q_A 187 AALHQLSRMLAKELVGEHINVNVIAPGRFPSR 218 (276)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCCCST
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeccCcCc
Confidence 9999988765 34899999999988753
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.08 E-value=5.3e-10 Score=118.92 Aligned_cols=169 Identities=18% Similarity=0.199 Sum_probs=113.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... ..+..+++...
T Consensus 24 l~~k~vlVTGas~gIG~ai----a~~L~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~~--------- 73 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSA----AVIFAK---------------EGAQVTITGRNEDR--LEETKQQILKA--------- 73 (297)
T ss_dssp CTTCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHHT---------
T ss_pred CCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHhc---------
Confidence 4579999999544443332 233322 25678888886421 22222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC-----c----hhhHHHHHHhhHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR-----F----DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv~gt~~L 315 (782)
.....++.++.+|++++ ++++.+++ .+|++||+||... + .+.++..+++|+.|+.++
T Consensus 74 -~~~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l 146 (297)
T 1xhl_A 74 -GVPAEKINAVVADVTEA------SGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM 146 (297)
T ss_dssp -TCCGGGEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHH
T ss_pred -CCCCceEEEEecCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHH
Confidence 01112688999999987 77777665 6899999999643 2 134567899999999999
Q ss_pred HHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 316 LEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 316 le~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
++++... .+ .++|++||...+.... + ....|+.||...|
T Consensus 147 ~~~~~~~~~~~~-g~IV~isS~~~~~~~~--------------------------------~-----~~~~Y~asKaa~~ 188 (297)
T 1xhl_A 147 TQKTKEHLIKTK-GEIVNVSSIVAGPQAH--------------------------------S-----GYPYYACAKAALD 188 (297)
T ss_dssp HHHHHHHHHHTT-CEEEEECCGGGSSSCC--------------------------------T-----TSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC-CEEEEEcCchhccCCC--------------------------------C-----CcchHHHHHHHHH
Confidence 9887542 23 7999999986543210 0 0167999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+++.++|||.|.++
T Consensus 189 ~l~~~la~el~~~gI~v~~v~PG~v~T~ 216 (297)
T 1xhl_A 189 QYTRCTAIDLIQHGVRVNSVSPGAVATG 216 (297)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred HHHHHHHHHhcccCeEEEEEeeCCCcCc
Confidence 988765 35899999999998864
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.2e-09 Score=113.26 Aligned_cols=165 Identities=13% Similarity=0.045 Sum_probs=107.3
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... ..+...++..
T Consensus 6 ~~k~vlVTGas~GIG~ai----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~----------- 53 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEI----AKKFAA---------------EGFTVFAGRRNGEK--LAPLVAEIEA----------- 53 (252)
T ss_dssp CSCEEEEECCSSHHHHHH----HHHHHH---------------TTCEEEEEESSGGG--GHHHHHHHHH-----------
T ss_pred CCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh-----------
Confidence 478999999644333332 333332 25678888886432 1222222211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
...++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+..+++.+
T Consensus 54 --~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 125 (252)
T 3h7a_A 54 --AGGRIVARSLDARNE------DEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRES 125 (252)
T ss_dssp --TTCEEEEEECCTTCH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred --cCCeEEEEECcCCCH------HHHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 123788999999998 77777776 57999999997532 2445678999999999998876
Q ss_pred HHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 320 KEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 320 ~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
... .+..++|++||........ ....|+.||...+.+.+
T Consensus 126 ~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~ 167 (252)
T 3h7a_A 126 ARLMLAHGQGKIFFTGATASLRGGS--------------------------------------GFAAFASAKFGLRAVAQ 167 (252)
T ss_dssp HHHHHHHTCEEEEEEEEGGGTCCCT--------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCcEEEEECCHHHcCCCC--------------------------------------CCccHHHHHHHHHHHHH
Confidence 321 2457899999986542210 11679999999998887
Q ss_pred Hc-----CCCCcE-EEecCCeEEec
Q psy16243 397 RG-----GAGMPV-AMVRPSIVIAT 415 (782)
Q Consensus 397 ~~-----~~glp~-~IvRp~~v~G~ 415 (782)
.. ..|+.+ .+++||.|..+
T Consensus 168 ~la~e~~~~gi~v~n~v~PG~v~T~ 192 (252)
T 3h7a_A 168 SMARELMPKNIHVAHLIIDSGVDTA 192 (252)
T ss_dssp HHHHHHGGGTEEEEEEEEC------
T ss_pred HHHHHhhhcCCEEEEEecCCccCCh
Confidence 65 347888 78999888754
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.08 E-value=8.3e-10 Score=114.25 Aligned_cols=160 Identities=14% Similarity=0.067 Sum_probs=103.6
Q ss_pred CcccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccc
Q psy16243 169 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPM 248 (782)
Q Consensus 169 ~p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l 248 (782)
.+.+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.. +.++++
T Consensus 14 ~~~~~~k~vlVTGas~gIG~~~----a~~l~~---------------~G~~V~~~~r~~------~~~~~~--------- 59 (249)
T 1o5i_A 14 ELGIRDKGVLVLAASRGIGRAV----ADVLSQ---------------EGAEVTICARNE------ELLKRS--------- 59 (249)
T ss_dssp --CCTTCEEEEESCSSHHHHHH----HHHHHH---------------TTCEEEEEESCH------HHHHHT---------
T ss_pred HhccCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEcCCH------HHHHhh---------
Confidence 3456789999999544444332 233322 256788888853 122211
Q ss_pred cccCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH---
Q psy16243 249 RKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM--- 318 (782)
Q Consensus 249 ~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~--- 318 (782)
.++.++ +|+ ... .+.+.+.+.++|++||+||.... .+.++..+++|+.|+.++.+.
T Consensus 60 --------~~~~~~-~D~-~~~----~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 125 (249)
T 1o5i_A 60 --------GHRYVV-CDL-RKD----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLP 125 (249)
T ss_dssp --------CSEEEE-CCT-TTC----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred --------CCeEEE-eeH-HHH----HHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 145566 898 221 12232333378999999996432 234567889999997766554
Q ss_pred -HHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 319 -AKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 319 -a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
+++. +..++|++||..++.... ....|+.||...+.+.+.
T Consensus 126 ~~~~~-~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~ 166 (249)
T 1o5i_A 126 AMKEK-GWGRIVAITSFSVISPIE--------------------------------------NLYTSNSARMALTGFLKT 166 (249)
T ss_dssp HHHHH-TCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHHHc-CCcEEEEEcchHhcCCCC--------------------------------------CCchHHHHHHHHHHHHHH
Confidence 4443 568999999987664210 016799999999988876
Q ss_pred c-----CCCCcEEEecCCeEEec
Q psy16243 398 G-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G~ 415 (782)
. ..|+++.++|||.+.++
T Consensus 167 la~e~~~~gi~v~~v~Pg~v~t~ 189 (249)
T 1o5i_A 167 LSFEVAPYGITVNCVAPGWTETE 189 (249)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCT
T ss_pred HHHHhhhcCeEEEEEeeCCCccC
Confidence 5 35899999999998874
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=6.3e-10 Score=115.03 Aligned_cols=163 Identities=18% Similarity=0.185 Sum_probs=111.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|... ...+...++
T Consensus 4 l~gk~vlVTGas~gIG~a~----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~------------ 50 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAI----AARLAA---------------DGATVIVSDINAE--GAKAAAASI------------ 50 (247)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEECSCHH--HHHHHHHHH------------
T ss_pred cCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHh------------
Confidence 4589999999544333332 233332 2567888777532 122222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 51 ----~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 120 (247)
T 3rwb_A 51 ----GKKARAIAADISDP------GSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTR 120 (247)
T ss_dssp ----CTTEEECCCCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----CCceEEEEcCCCCH------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence 13688899999988 77777766 68999999997532 13456789999999999988
Q ss_pred H----HHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 M----AKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~----a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+ +++.+...++|++||...+.... ....|+.||...+.
T Consensus 121 ~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~ 162 (247)
T 3rwb_A 121 AGTDQMRAAGKAGRVISIASNTFFAGTP--------------------------------------NMAAYVAAKGGVIG 162 (247)
T ss_dssp HHHHHHHHHTCCEEEEEECCTHHHHTCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcEEEEECchhhccCCC--------------------------------------CchhhHHHHHHHHH
Confidence 7 34433367999999986543210 11689999998888
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+++..++||.|..+
T Consensus 163 ~~~~la~e~~~~gi~vn~v~PG~v~t~ 189 (247)
T 3rwb_A 163 FTRALATELGKYNITANAVTPGLIESD 189 (247)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence 87765 35899999999988764
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.07 E-value=2.4e-09 Score=112.32 Aligned_cols=169 Identities=17% Similarity=0.161 Sum_probs=112.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|... +.+|++..|.... ...+...++..
T Consensus 29 l~gk~~lVTGas~GIG~ai----a~~la~~---------------G~~V~~~~~~~~~-~~~~~~~~l~~---------- 78 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAI----AKRLALE---------------GAAVALTYVNAAE-RAQAVVSEIEQ---------- 78 (271)
T ss_dssp CTTCEEEEETTTSHHHHHH----HHHHHHT---------------TCEEEEEESSCHH-HHHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCcHHHHHH----HHHHHHC---------------CCEEEEEeCCCHH-HHHHHHHHHHh----------
Confidence 5689999999644333332 3333322 5677776554321 11222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
.-.++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+..+++
T Consensus 79 ---~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~ 149 (271)
T 3v2g_A 79 ---AGGRAVAIRADNRDA------EAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIR 149 (271)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---cCCcEEEEECCCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 124788999999998 77777766 68999999997532 24456789999999999999
Q ss_pred HHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 318 MAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 318 ~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
.+... ++-.++|++||......+. +....|+.||...+.+.+
T Consensus 150 ~~~~~m~~~g~iv~isS~~~~~~~~-------------------------------------~~~~~Y~asKaa~~~l~~ 192 (271)
T 3v2g_A 150 SASRHLGDGGRIITIGSNLAELVPW-------------------------------------PGISLYSASKAALAGLTK 192 (271)
T ss_dssp HHHHHCCTTCEEEEECCGGGTCCCS-------------------------------------TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCEEEEEeChhhccCCC-------------------------------------CCchHHHHHHHHHHHHHH
Confidence 97653 3456899999864321100 011689999999999877
Q ss_pred Hc-----CCCCcEEEecCCeEEecc
Q psy16243 397 RG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~~ 416 (782)
.. ..|+++..++||.|.++.
T Consensus 193 ~la~e~~~~gIrvn~v~PG~v~T~~ 217 (271)
T 3v2g_A 193 GLARDLGPRGITVNIVHPGSTDTDM 217 (271)
T ss_dssp HHHHHHGGGTCEEEEEEECSBCSSS
T ss_pred HHHHHhhhhCeEEEEEecCCCcCCc
Confidence 65 348999999999988653
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.07 E-value=1.8e-09 Score=111.32 Aligned_cols=159 Identities=16% Similarity=0.135 Sum_probs=108.5
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ++++..+.
T Consensus 4 ~~k~vlVTGas~giG~~i----a~~l~~---------------~G~~V~~~~r~~~------~~~~~~~~---------- 48 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRAT----LELFAK---------------EGARLVACDIEEG------PLREAAEA---------- 48 (245)
T ss_dssp TTCEEEEESTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH------HHHHHHHT----------
T ss_pred CCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCHH------HHHHHHHH----------
Confidence 468999999644444333 233322 2567888888532 22221110
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
. .+.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.+++++
T Consensus 49 ---~-~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 118 (245)
T 1uls_A 49 ---V-GAHPVVMDVADP------ASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKA 118 (245)
T ss_dssp ---T-TCEEEECCTTCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---c-CCEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHH
Confidence 0 267889999987 77776665 47999999996532 244567889999999999988
Q ss_pred HHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+... .+..++|++||...++.+. ...|+.||...+.+.
T Consensus 119 ~~~~m~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~Y~asK~a~~~~~ 159 (245)
T 1uls_A 119 ASEAMREKNPGSIVLTASRVYLGNLG---------------------------------------QANYAASMAGVVGLT 159 (245)
T ss_dssp HHHHHTTTCCEEEEEECCGGGGCCTT---------------------------------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEEccchhcCCCC---------------------------------------chhHHHHHHHHHHHH
Confidence 7543 2467999999987322210 157999999988887
Q ss_pred HHc-----CCCCcEEEecCCeEEec
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.. ..|+.+.+++||.+..+
T Consensus 160 ~~la~e~~~~gi~v~~v~PG~v~t~ 184 (245)
T 1uls_A 160 RTLALELGRWGIRVNTLAPGFIETR 184 (245)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred HHHHHHHhHhCeEEEEEEeCcCcCc
Confidence 665 34899999999988654
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.07 E-value=9.4e-10 Score=115.71 Aligned_cols=170 Identities=18% Similarity=0.242 Sum_probs=112.5
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++...
T Consensus 29 ~l~~k~vlVTGasggIG~~l----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~~-------- 79 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAV----ARALVQ---------------QGLKVVGCARTVGN--IEELAAECKSA-------- 79 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHHT--------
T ss_pred ccCCCEEEEECCCchHHHHH----HHHHHH---------------CCCEEEEEECChHH--HHHHHHHHHhc--------
Confidence 35689999999544444333 233322 25678888886431 11112221110
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHH----H
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRA----T 312 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~g----t 312 (782)
....++.++.+|++++ ++++++++ .+|+|||+||.... .+.++..+++|+.| +
T Consensus 80 ---~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~ 150 (279)
T 1xg5_A 80 ---GYPGTLIPYRCDLSNE------EDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICT 150 (279)
T ss_dssp ---TCSSEEEEEECCTTCH------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---CCCceEEEEEecCCCH------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence 0113688899999987 77776665 68999999996432 24456789999999 7
Q ss_pred HHHHHHHHHccCC--ceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 313 KALLEMAKEMKQL--KSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 313 ~~Lle~a~~~~~~--~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
+.+++.+++. +. .++|++||..++...+ . +....|+.||..
T Consensus 151 ~~~l~~~~~~-~~~~g~iv~isS~~~~~~~~--------~----------------------------~~~~~Y~~sK~a 193 (279)
T 1xg5_A 151 REAYQSMKER-NVDDGHIININSMSGHRVLP--------L----------------------------SVTHFYSATKYA 193 (279)
T ss_dssp HHHHHHHHHT-TCCSCEEEEECCGGGTSCCS--------C----------------------------GGGHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCceEEEEcChhhcccCC--------C----------------------------CCCchhHHHHHH
Confidence 7777777765 44 7999999987653211 0 001679999999
Q ss_pred HHHHHHHc-------CCCCcEEEecCCeEEec
Q psy16243 391 AEDMVRRG-------GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 391 aE~ll~~~-------~~glp~~IvRp~~v~G~ 415 (782)
.|.+.+.. ..++++.+++||.|.++
T Consensus 194 ~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 225 (279)
T 1xg5_A 194 VTALTEGLRQELREAQTHIRATCISPGVVETQ 225 (279)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEEecCcccch
Confidence 98887654 35899999999988753
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.06 E-value=5.8e-10 Score=116.88 Aligned_cols=169 Identities=20% Similarity=0.169 Sum_probs=112.5
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|... +.+|+++.|... +...+..+++..
T Consensus 15 ~l~~k~~lVTGas~gIG~ai----a~~l~~~---------------G~~V~~~~~~~~-~~~~~~~~~~~~--------- 65 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAV----AVHLGRL---------------GAKVVVNYANST-KDAEKVVSEIKA--------- 65 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHH----HHHHHHT---------------TCEEEEEESSCH-HHHHHHHHHHHH---------
T ss_pred CcCCCEEEEECCCchHHHHH----HHHHHHC---------------CCEEEEEcCCCH-HHHHHHHHHHHh---------
Confidence 35689999999644333332 2333322 567777665422 111222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.+++
T Consensus 66 ----~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~ 135 (270)
T 3is3_A 66 ----LGSDAIAIKADIRQV------PEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVA 135 (270)
T ss_dssp ----TTCCEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ----cCCcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence 124788999999997 77777665 57999999997542 2445678999999999999
Q ss_pred HHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 317 EMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 317 e~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+++... ..-.++|++||....... . +....|+.||+..+.+.
T Consensus 136 ~~~~~~~~~~g~iv~isS~~~~~~~--------------------------------~-----~~~~~Y~asKaa~~~~~ 178 (270)
T 3is3_A 136 REAYRHLTEGGRIVLTSSNTSKDFS--------------------------------V-----PKHSLYSGSKGAVDSFV 178 (270)
T ss_dssp HHHHHHCCTTCEEEEECCTTTTTCC--------------------------------C-----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEeCchhccCC--------------------------------C-----CCCchhHHHHHHHHHHH
Confidence 987754 223489999997521110 0 01167999999999988
Q ss_pred HHc-----CCCCcEEEecCCeEEec
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.. ..|+.+..++||.|..+
T Consensus 179 ~~la~e~~~~gi~vn~v~PG~v~T~ 203 (270)
T 3is3_A 179 RIFSKDCGDKKITVNAVAPGGTVTD 203 (270)
T ss_dssp HHHHHHHGGGTCEEEEEEECSBCST
T ss_pred HHHHHHhcccCeEEEEEEeCCccCh
Confidence 765 35899999999998865
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.06 E-value=8e-10 Score=114.47 Aligned_cols=154 Identities=14% Similarity=0.083 Sum_probs=102.0
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
...+|+++|||..+..|..+ .+.|.. .+.+|+++.|.....
T Consensus 19 ~~m~k~vlITGas~gIG~~l----a~~l~~---------------~G~~V~~~~r~~~~~-------------------- 59 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEV----VKFFKS---------------KSWNTISIDFRENPN-------------------- 59 (251)
T ss_dssp ---CCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESSCCTT--------------------
T ss_pred cccCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEeCCcccc--------------------
Confidence 35579999999544433332 233322 256788888864311
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~L 315 (782)
.-..+..|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.++
T Consensus 60 -------~~~~~~~d~~d~------~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 126 (251)
T 3orf_A 60 -------ADHSFTIKDSGE------EEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFAS 126 (251)
T ss_dssp -------SSEEEECSCSSH------HHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred -------cccceEEEeCCH------HHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHH
Confidence 012356677766 66666655 35999999996321 234557889999999999
Q ss_pred HHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 316 LEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 316 le~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++++... ..-.++|++||...+.... ....|+.||...|.+
T Consensus 127 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~ 168 (251)
T 3orf_A 127 AHIGAKLLNQGGLFVLTGASAALNRTS--------------------------------------GMIAYGATKAATHHI 168 (251)
T ss_dssp HHHHHHHEEEEEEEEEECCGGGGSCCT--------------------------------------TBHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCEEEEEechhhccCCC--------------------------------------CCchhHHHHHHHHHH
Confidence 9998753 1224899999987653210 016899999999999
Q ss_pred HHHcC-------CCCcEEEecCCeEEe
Q psy16243 395 VRRGG-------AGMPVAMVRPSIVIA 414 (782)
Q Consensus 395 l~~~~-------~glp~~IvRp~~v~G 414 (782)
.+... .++.+.+++||.|.+
T Consensus 169 ~~~la~e~~~~~~gi~v~~v~PG~v~t 195 (251)
T 3orf_A 169 IKDLASENGGLPAGSTSLGILPVTLDT 195 (251)
T ss_dssp HHHHTSTTSSSCTTCEEEEEEESCBCC
T ss_pred HHHHHHHhcccCCCcEEEEEecCcCcC
Confidence 98762 378888888887765
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.06 E-value=1.6e-09 Score=112.24 Aligned_cols=166 Identities=17% Similarity=0.112 Sum_probs=106.9
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 9 ~l~~k~vlVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~--------- 58 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREA----AMTYAR---------------YGATVILLGRNEEK--LRQVASHINE--------- 58 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH---------
T ss_pred ccCCCEEEEeCCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHh---------
Confidence 46689999999644433332 233322 25678888886331 1222222211
Q ss_pred cCcccccceeEEecCC--CCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----c----hhhHHHHHHhhHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDC--LKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----F----DAHLKVAVSINLRATK 313 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi--~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~ 313 (782)
....++.++.+|+ +++ ++.+++++ .+|++||+|+... + .+.++..+++|+.|+.
T Consensus 59 ---~~~~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 129 (252)
T 3f1l_A 59 ---ETGRQPQWFILDLLTCTS------ENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATF 129 (252)
T ss_dssp ---HHSCCCEEEECCTTTCCH------HHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHH
T ss_pred ---hcCCCceEEEEecccCCH------HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHH
Confidence 0112678899999 665 66666655 6899999999742 1 1345678999999999
Q ss_pred HHHHHHHH---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 314 ALLEMAKE---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 314 ~Lle~a~~---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
.+++++.. ..+..++|++||...+.... ....|+.||..
T Consensus 130 ~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a 171 (252)
T 3f1l_A 130 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRA--------------------------------------NWGAYAASKFA 171 (252)
T ss_dssp HHHHHHHHHHHTSSSCEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECChhhccCCC--------------------------------------CCchhHHHHHH
Confidence 99998732 12567999999986542210 11679999999
Q ss_pred HHHHHHHc----CCCCcEEEecCCeEE
Q psy16243 391 AEDMVRRG----GAGMPVAMVRPSIVI 413 (782)
Q Consensus 391 aE~ll~~~----~~glp~~IvRp~~v~ 413 (782)
.+.+.+.. ...+.+..+.||.|.
T Consensus 172 ~~~l~~~la~e~~~~irvn~v~PG~v~ 198 (252)
T 3f1l_A 172 TEGMMQVLADEYQQRLRVNCINPGGTR 198 (252)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEECCSBS
T ss_pred HHHHHHHHHHHhcCCcEEEEEecCccc
Confidence 99888766 234677777776654
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.05 E-value=1e-09 Score=113.33 Aligned_cols=157 Identities=18% Similarity=0.206 Sum_probs=105.9
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
+.+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.....
T Consensus 11 ~~l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~~------------------- 52 (247)
T 1uzm_A 11 PPFVSRSVLVTGGNRGIGLAI----AQRLAA---------------DGHKVAVTHRGSGAP------------------- 52 (247)
T ss_dssp CCCCCCEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEEESSSCCC-------------------
T ss_pred ccCCCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEeCChHHH-------------------
Confidence 345689999999544433332 233322 256788888753210
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHH
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~L 315 (782)
.++..+.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.++
T Consensus 53 -------~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 119 (247)
T 1uzm_A 53 -------KGLFGVEVDVTDS------DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRV 119 (247)
T ss_dssp -------TTSEEEECCTTCH------HHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHH
T ss_pred -------HHhcCeeccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence 0111378899987 67766665 57999999997532 245667899999999999
Q ss_pred HHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 316 LEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 316 le~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
++++... .+..++|++||...+.... ....|+.||...|
T Consensus 120 ~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~ 161 (247)
T 1uzm_A 120 AQRASRSMQRNKFGRMIFIGSVSGLWGIG--------------------------------------NQANYAASKAGVI 161 (247)
T ss_dssp HHHHHHHHHHTTCEEEEEECCCCC-------------------------------------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEECCHhhccCCC--------------------------------------CChhHHHHHHHHH
Confidence 9987531 2568999999986532100 0167999999888
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+++.+++||.+.++
T Consensus 162 ~~~~~la~e~~~~gi~v~~v~PG~v~t~ 189 (247)
T 1uzm_A 162 GMARSIARELSKANVTANVVAPGYIDTD 189 (247)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHhhhcCcEEEEEEeCCCccc
Confidence 887765 35899999999988753
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.05 E-value=4.5e-10 Score=115.77 Aligned_cols=115 Identities=17% Similarity=0.179 Sum_probs=87.9
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-----CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-c
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-----NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM-K 323 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-----~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~-~ 323 (782)
.++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 44 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 117 (244)
T 4e4y_A 44 ENLKFIKADLTKQ------QDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLK 117 (244)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEE
T ss_pred ccceEEecCcCCH------HHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhc
Confidence 3568899999987 77777776 68999999997432 1445678999999999999987653 1
Q ss_pred CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----
Q psy16243 324 QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG----- 398 (782)
Q Consensus 324 ~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~----- 398 (782)
.-.++|++||...+.... ....|+.||...|.+.+..
T Consensus 118 ~~g~iv~~sS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~ 159 (244)
T 4e4y_A 118 VGASIVFNGSDQCFIAKP--------------------------------------NSFAYTLSKGAIAQMTKSLALDLA 159 (244)
T ss_dssp EEEEEEEECCGGGTCCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred cCcEEEEECCHHHccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHH
Confidence 114899999987553210 0157999999999998765
Q ss_pred CCCCcEEEecCCeEEec
Q psy16243 399 GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ~~glp~~IvRp~~v~G~ 415 (782)
..|+++.+++||.|.++
T Consensus 160 ~~gi~v~~v~PG~v~T~ 176 (244)
T 4e4y_A 160 KYQIRVNTVCPGTVDTD 176 (244)
T ss_dssp GGTCEEEEEEESCBCCH
T ss_pred HcCeEEEEEecCccCch
Confidence 34899999999998764
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=6.9e-10 Score=115.08 Aligned_cols=138 Identities=13% Similarity=0.048 Sum_probs=84.8
Q ss_pred EecCCCCCCCCCCHHhHHHHhcC----ceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHc---cCCceEEEEecc
Q psy16243 262 VTGDCLKPGVGINSEDRQTLVDN----IHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEM---KQLKSFVHVSTA 334 (782)
Q Consensus 262 i~gDi~~~~lGl~~~~~~~l~~~----vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~---~~~~~fV~vST~ 334 (782)
+.+|++++ ++++++++. +|++||+|+......+.+..+++|+.|+.++++++... .+..++|++||.
T Consensus 42 ~~~Dl~~~------~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~ 115 (257)
T 1fjh_A 42 LSTAEGRK------QAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV 115 (257)
T ss_dssp TTSHHHHH------HHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred cccCCCCH------HHHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence 56777766 677777654 59999999976534568889999999999999987532 245799999999
Q ss_pred eeccCCCcccccccCCCCChhHHHHHHHhcchhhhhh-hcCCccCCCCccHHHHHHHHHHHHHHc-----CCCCcEEEec
Q psy16243 335 YSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDK-ITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVR 408 (782)
Q Consensus 335 ~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~-~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvR 408 (782)
.++..+..- . ..+.... .-+.+.... .....+.+....|+.||...|.+.+.. ..|+.+.+++
T Consensus 116 ~~~~~~~~~-~-------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~ 184 (257)
T 1fjh_A 116 ASAHLAFDK-N-------PLALALE---AGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIA 184 (257)
T ss_dssp GGGSSCGGG-C-------TTHHHHH---HTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEE
T ss_pred hhhcccccc-c-------hhhhhhc---ccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEe
Confidence 876321100 0 0000000 000000000 000000011168999999999998776 2589999999
Q ss_pred CCeEEecc
Q psy16243 409 PSIVIATN 416 (782)
Q Consensus 409 p~~v~G~~ 416 (782)
||.+.++.
T Consensus 185 PG~v~t~~ 192 (257)
T 1fjh_A 185 PGATETPL 192 (257)
T ss_dssp ECC-----
T ss_pred eCCCCCcc
Confidence 99998753
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.04 E-value=6.4e-10 Score=116.34 Aligned_cols=168 Identities=15% Similarity=0.179 Sum_probs=111.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ .+.|.. .+.+|++..|... ...+..+++...
T Consensus 8 l~~k~~lVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~l~~~--------- 57 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAI----ATSLVA---------------EGANVLINGRREE--NVNETIKEIRAQ--------- 57 (267)
T ss_dssp CTTCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESSHH--HHHHHHHHHHHH---------
T ss_pred cCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHhh---------
Confidence 4579999999544433332 233322 2567888887643 122222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc---CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD---NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~---~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
.+ ..++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+..+.+.+..
T Consensus 58 ~~--~~~~~~~~~D~~~~------~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 129 (267)
T 3t4x_A 58 YP--DAILQPVVADLGTE------QGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLK 129 (267)
T ss_dssp CT--TCEEEEEECCTTSH------HHHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CC--CceEEEEecCCCCH------HHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 01 13678899999987 67777766 68999999997532 244566799999998777766432
Q ss_pred c---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 322 M---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 322 ~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
. .+..++|++||...+.... ....|+.||...+.+.+..
T Consensus 130 ~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~l 171 (267)
T 3t4x_A 130 KMIERKEGRVIFIASEAAIMPSQ--------------------------------------EMAHYSATKTMQLSLSRSL 171 (267)
T ss_dssp HHHHTTEEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCEEEEEcchhhccCCC--------------------------------------cchHHHHHHHHHHHHHHHH
Confidence 1 2557999999987553210 1168999999999988765
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..|+.+..++||.+..+
T Consensus 172 a~e~~~~gi~vn~v~PG~v~t~ 193 (267)
T 3t4x_A 172 AELTTGTNVTVNTIMPGSTLTE 193 (267)
T ss_dssp HHHTTTSEEEEEEEEECCBCCH
T ss_pred HHHhCCCCeEEEEEeCCeecCc
Confidence 24788999999888764
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.03 E-value=9.7e-10 Score=112.63 Aligned_cols=154 Identities=15% Similarity=0.085 Sum_probs=105.4
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+..|..+ .+.|.. .+.+|+++.|......
T Consensus 3 ~k~vlITGas~gIG~~~----a~~l~~---------------~G~~V~~~~r~~~~~~---------------------- 41 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAI----LEFFKK---------------NGYTVLNIDLSANDQA---------------------- 41 (236)
T ss_dssp CEEEEEETTTSHHHHHH----HHHHHH---------------TTEEEEEEESSCCTTS----------------------
T ss_pred CCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEecCccccc----------------------
Confidence 67899999544443332 233322 2567888888643110
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc---------CceEEEEcCcccC---c-----hhhHHHHHHhhHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD---------NIHVVFHCAATVR---F-----DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~---------~vdiViH~Aa~v~---f-----~~~~~~~~~~Nv~gt~~Ll 316 (782)
.+..++.+|++++ ++++.+++ .+|+|||+||... + .+.++..+++|+.|+.+++
T Consensus 42 ---~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 112 (236)
T 1ooe_A 42 ---DSNILVDGNKNWT------EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAA 112 (236)
T ss_dssp ---SEEEECCTTSCHH------HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cccEEEeCCCCCH------HHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence 1245678999887 66666554 6899999999643 1 1345678899999999999
Q ss_pred HHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 317 EMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 317 e~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+++... ..-.++|++||...+.... ....|+.||...+.+.
T Consensus 113 ~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~ 154 (236)
T 1ooe_A 113 KLATTHLKPGGLLQLTGAAAAMGPTP--------------------------------------SMIGYGMAKAAVHHLT 154 (236)
T ss_dssp HHHHHHEEEEEEEEEECCGGGGSCCT--------------------------------------TBHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCEEEEECchhhccCCC--------------------------------------CcHHHHHHHHHHHHHH
Confidence 987653 1225899999987653210 0167999999999998
Q ss_pred HHc-------CCCCcEEEecCCeEEec
Q psy16243 396 RRG-------GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~-------~~glp~~IvRp~~v~G~ 415 (782)
+.. ..|+.+.++|||.+.++
T Consensus 155 ~~la~e~~~~~~gi~v~~v~Pg~v~t~ 181 (236)
T 1ooe_A 155 SSLAAKDSGLPDNSAVLTIMPVTLDTP 181 (236)
T ss_dssp HHHHSTTSSCCTTCEEEEEEESCBCCH
T ss_pred HHHHHHhcccCCCeEEEEEecCcccCc
Confidence 775 13589999999988753
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.03 E-value=3.5e-09 Score=112.68 Aligned_cols=116 Identities=20% Similarity=0.155 Sum_probs=88.7
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
.++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+..+++++..
T Consensus 89 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 162 (299)
T 3t7c_A 89 RRIIASQVDVRDF------DAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIP 162 (299)
T ss_dssp CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEECCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4789999999997 77777665 68999999996532 134567899999999999998643
Q ss_pred c----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 322 M----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 322 ~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
. ++..++|++||...+.... ....|+.||...+.+.+.
T Consensus 163 ~~~~~~~~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~ 204 (299)
T 3t7c_A 163 HIMAGKRGGSIVFTSSIGGLRGAE--------------------------------------NIGNYIASKHGLHGLMRT 204 (299)
T ss_dssp HHHHTTSCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCcEEEEECChhhccCCC--------------------------------------CcchHHHHHHHHHHHHHH
Confidence 2 2357899999986543210 116899999999988876
Q ss_pred c-----CCCCcEEEecCCeEEecc
Q psy16243 398 G-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G~~ 416 (782)
. ..|+.+..++||.|..+.
T Consensus 205 la~e~~~~gI~vn~v~PG~v~T~~ 228 (299)
T 3t7c_A 205 MALELGPRNIRVNIVCPSSVATPM 228 (299)
T ss_dssp HHHHHGGGTEEEEEEEESCBSSTT
T ss_pred HHHHhcccCcEEEEEecCCccCcc
Confidence 5 348999999999988754
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.3e-09 Score=113.15 Aligned_cols=160 Identities=18% Similarity=0.212 Sum_probs=107.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|... +.+|+++.|... +..++.
T Consensus 7 l~~k~vlVTGas~gIG~ai----a~~l~~~---------------G~~V~~~~r~~~-----~~~~~~------------ 50 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLAT----TKRLLDA---------------GAQVVVLDIRGE-----DVVADL------------ 50 (257)
T ss_dssp ---CEEEEETTTSHHHHHH----HHHHHHH---------------TCEEEEEESSCH-----HHHHHT------------
T ss_pred ecCCEEEEeCCCCHHHHHH----HHHHHHC---------------CCEEEEEeCchH-----HHHHhc------------
Confidence 4578999999644433332 2333222 567888877321 111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCc-----------hhhHHHHHHhhHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRF-----------DAHLKVAVSINLRATKA 314 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ 314 (782)
..++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+..
T Consensus 51 ----~~~~~~~~~D~~~~------~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~ 120 (257)
T 3tl3_A 51 ----GDRARFAAADVTDE------AAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFN 120 (257)
T ss_dssp ----CTTEEEEECCTTCH------HHHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHH
T ss_pred ----CCceEEEECCCCCH------HHHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHH
Confidence 23688999999987 77777765 78999999996421 24466789999999999
Q ss_pred HHHHHHHc-----------cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCcc
Q psy16243 315 LLEMAKEM-----------KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNT 383 (782)
Q Consensus 315 Lle~a~~~-----------~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~ 383 (782)
+++++... .+-.++|++||...+.... . ...
T Consensus 121 l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------------------------~-----~~~ 162 (257)
T 3tl3_A 121 VLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI---------------------------------G-----QAA 162 (257)
T ss_dssp HHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH---------------------------------H-----HHH
T ss_pred HHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC---------------------------------C-----Ccc
Confidence 99987643 1235899999987553210 0 057
Q ss_pred HHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 384 YALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 384 Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
|+.||...+.+.+.. ..|+.+..++||.|..+
T Consensus 163 Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~ 199 (257)
T 3tl3_A 163 YSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTP 199 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccCh
Confidence 999999888887665 35899999999988764
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.03 E-value=2e-09 Score=112.55 Aligned_cols=115 Identities=22% Similarity=0.273 Sum_probs=85.8
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 77 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 150 (267)
T 3u5t_A 77 GKALTAQADVSDP------AAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQR 150 (267)
T ss_dssp CCEEEEECCTTCH------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999987 77777665 68999999997532 1345678889999999999887543
Q ss_pred -cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---
Q psy16243 323 -KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--- 398 (782)
Q Consensus 323 -~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--- 398 (782)
..-.++|++||........ ....|+.||+..+.+.+..
T Consensus 151 ~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e 192 (267)
T 3u5t_A 151 LRVGGRIINMSTSQVGLLHP--------------------------------------SYGIYAAAKAGVEAMTHVLSKE 192 (267)
T ss_dssp EEEEEEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCeEEEEeChhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHH
Confidence 2235899999976542210 1168999999999998765
Q ss_pred --CCCCcEEEecCCeEEec
Q psy16243 399 --GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 --~~glp~~IvRp~~v~G~ 415 (782)
..|+.+..++||.|..+
T Consensus 193 ~~~~gI~vn~v~PG~v~T~ 211 (267)
T 3u5t_A 193 LRGRDITVNAVAPGPTATD 211 (267)
T ss_dssp TTTSCCEEEEEEECCBC--
T ss_pred hhhhCCEEEEEEECCCcCc
Confidence 34899999999988754
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.02 E-value=3.2e-09 Score=111.58 Aligned_cols=115 Identities=18% Similarity=0.193 Sum_probs=87.2
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH-
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE- 321 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~- 321 (782)
.++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.++++++..
T Consensus 73 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 146 (277)
T 3tsc_A 73 RRIVAAVVDTRDF------DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPR 146 (277)
T ss_dssp CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4788999999987 77777665 48999999997543 144567899999999999988543
Q ss_pred ---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 322 ---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 322 ---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
.+.-.++|++||...+.... ....|+.||+..+.+.+..
T Consensus 147 ~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~l 188 (277)
T 3tsc_A 147 IIEGGRGGSIILISSAAGMKMQP--------------------------------------FMIHYTASKHAVTGLARAF 188 (277)
T ss_dssp HHHHTSCEEEEEECCGGGTSCCS--------------------------------------SCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEEEccHhhCCCCC--------------------------------------CchhhHHHHHHHHHHHHHH
Confidence 22246899999987543210 1167999999999988765
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..|+.+..++||.|..+
T Consensus 189 a~e~~~~gi~vn~v~PG~v~T~ 210 (277)
T 3tsc_A 189 AAELGKHSIRVNSVHPGPVNTP 210 (277)
T ss_dssp HHHHGGGTEEEEEEEESSBSSG
T ss_pred HHHhCccCeEEEEEEeCCCcCC
Confidence 34899999999988764
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=1.6e-09 Score=111.35 Aligned_cols=154 Identities=14% Similarity=0.046 Sum_probs=105.6
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|......
T Consensus 6 ~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~~~--------------------- 45 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRC----VQAFRA---------------RNWWVASIDVVENEEA--------------------- 45 (241)
T ss_dssp CCCEEEEETTTSHHHHHH----HHHHHT---------------TTCEEEEEESSCCTTS---------------------
T ss_pred CCCEEEEECCCcHHHHHH----HHHHHh---------------CCCEEEEEeCChhhcc---------------------
Confidence 368999999544433332 233322 2567888888643110
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc---------CceEEEEcCcccC---c-----hhhHHHHHHhhHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD---------NIHVVFHCAATVR---F-----DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~---------~vdiViH~Aa~v~---f-----~~~~~~~~~~Nv~gt~~L 315 (782)
....++.+|++++ ++++++++ .+|++||+|+... + .+.++..+++|+.|+..+
T Consensus 46 ----~~~~~~~~D~~~~------~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~ 115 (241)
T 1dhr_A 46 ----SASVIVKMTDSFT------EQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 115 (241)
T ss_dssp ----SEEEECCCCSCHH------HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCcEEEEcCCCCH------HHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHH
Confidence 1245778999987 66666654 6899999999643 1 134556889999999999
Q ss_pred HHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 316 LEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 316 le~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++++... ..-.++|++||...+.... ....|+.||...|.+
T Consensus 116 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~ 157 (241)
T 1dhr_A 116 SHLATKHLKEGGLLTLAGAKAALDGTP--------------------------------------GMIGYGMAKGAVHQL 157 (241)
T ss_dssp HHHHHHHEEEEEEEEEECCGGGGSCCT--------------------------------------TBHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCEEEEECCHHHccCCC--------------------------------------CchHHHHHHHHHHHH
Confidence 9998653 1125899999987653210 016799999999999
Q ss_pred HHHcC-------CCCcEEEecCCeEEe
Q psy16243 395 VRRGG-------AGMPVAMVRPSIVIA 414 (782)
Q Consensus 395 l~~~~-------~glp~~IvRp~~v~G 414 (782)
.+... .|+.+.+++||.+-.
T Consensus 158 ~~~la~e~~~~~~gi~v~~v~PG~v~T 184 (241)
T 1dhr_A 158 CQSLAGKNSGMPSGAAAIAVLPVTLDT 184 (241)
T ss_dssp HHHHTSTTSSCCTTCEEEEEEESCEEC
T ss_pred HHHHHHHhccCCCCeEEEEEecCcccC
Confidence 88762 368899999988764
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.2e-09 Score=111.73 Aligned_cols=112 Identities=15% Similarity=0.091 Sum_probs=80.8
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH----
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA---- 319 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a---- 319 (782)
++.++.+|++++ ++++++++ .+|+|||+||.... .+.++..+++|+.|+.++++.+
T Consensus 51 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 124 (234)
T 2ehd_A 51 GALPLPGDVREE------GDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPAL 124 (234)
T ss_dssp TCEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hceEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 678899999987 67766654 67999999996432 2445678899999998666654
Q ss_pred HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 320 KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 320 ~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
++. +..++|++||..++.... ....|+.||...|.+.+..
T Consensus 125 ~~~-~~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la 165 (234)
T 2ehd_A 125 LRR-GGGTIVNVGSLAGKNPFK--------------------------------------GGAAYNASKFGLLGLAGAAM 165 (234)
T ss_dssp HTT-TCEEEEEECCTTTTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HhC-CCcEEEEECCchhcCCCC--------------------------------------CCchhhHHHHHHHHHHHHHH
Confidence 333 578999999986543210 1168999999888887654
Q ss_pred ----CCCCcEEEecCCeEEe
Q psy16243 399 ----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G 414 (782)
..|+++.++|||.+..
T Consensus 166 ~e~~~~gi~v~~v~Pg~v~t 185 (234)
T 2ehd_A 166 LDLREANVRVVNVLPGSVDT 185 (234)
T ss_dssp HHHGGGTEEEEEEECC----
T ss_pred HHHhhcCcEEEEEEeCCCcC
Confidence 3589999999998875
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=5.4e-09 Score=110.34 Aligned_cols=116 Identities=16% Similarity=0.124 Sum_probs=88.1
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
.++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 76 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 149 (286)
T 3uve_A 76 RRIVTAEVDVRDY------DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVP 149 (286)
T ss_dssp CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4789999999998 77777665 68999999997432 134567899999999999998653
Q ss_pred c----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 322 M----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 322 ~----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
. +.-.++|++||...+.... ....|+.||...+.+.+.
T Consensus 150 ~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~ 191 (286)
T 3uve_A 150 HMIAGGRGGSIILTSSVGGLKAYP--------------------------------------HTGHYVAAKHGVVGLMRA 191 (286)
T ss_dssp HHHHHTSCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCcEEEEECchhhccCCC--------------------------------------CccHHHHHHHHHHHHHHH
Confidence 2 2246899999986543210 116799999999988876
Q ss_pred c-----CCCCcEEEecCCeEEecc
Q psy16243 398 G-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G~~ 416 (782)
. ..|+.+..++||.|..+.
T Consensus 192 la~e~~~~gI~vn~v~PG~v~T~~ 215 (286)
T 3uve_A 192 FGVELGQHMIRVNSVHPTHVKTPM 215 (286)
T ss_dssp HHHHHGGGTEEEEEEEESSBSSTT
T ss_pred HHHHhcccCeEEEEEecCcccCCc
Confidence 5 358999999999987653
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.3e-09 Score=112.74 Aligned_cols=116 Identities=16% Similarity=0.187 Sum_probs=86.0
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC-------------ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN-------------IHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~-------------vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
.++.++.+|+++. ++.+.+++. +|++||+|+.... .+.++..+++|+.|+..++
T Consensus 57 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 130 (255)
T 3icc_A 57 GSAFSIGANLESL------HGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFII 130 (255)
T ss_dssp CEEEEEECCTTSH------HHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred CceEEEecCcCCH------HHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHH
Confidence 4688899999987 666555442 8999999997432 1345578899999999999
Q ss_pred HHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 317 EMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 317 e~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+.+... .+-.++|++||.......+ ....|+.||+..+.+.
T Consensus 131 ~~~~~~~~~~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~ 172 (255)
T 3icc_A 131 QQALSRLRDNSRIINISSAATRISLP--------------------------------------DFIAYSMTKGAINTMT 172 (255)
T ss_dssp HHHTTTEEEEEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCCEEEEeCChhhccCCC--------------------------------------CcchhHHhHHHHHHHH
Confidence 998643 2235899999986543210 0167999999999988
Q ss_pred HHc-----CCCCcEEEecCCeEEecc
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
+.. ..|+.+..++||.+..+.
T Consensus 173 ~~la~e~~~~gi~v~~v~PG~v~t~~ 198 (255)
T 3icc_A 173 FTLAKQLGARGITVNAILPGFVKTDM 198 (255)
T ss_dssp HHHHHHHGGGTCEEEEEEECCBCCSS
T ss_pred HHHHHHHHhcCeEEEEEEEeeecccc
Confidence 765 348999999999887653
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.01 E-value=4.4e-09 Score=109.69 Aligned_cols=171 Identities=20% Similarity=0.138 Sum_probs=111.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+. .|+..+..+.|... +.+|+++.|..... ..+.++++..
T Consensus 18 l~~k~vlITGas~~--~giG~~~a~~l~~~---------------G~~v~~~~~~~~~~-~~~~~~~l~~---------- 69 (267)
T 3gdg_A 18 LKGKVVVVTGASGP--KGMGIEAARGCAEM---------------GAAVAITYASRAQG-AEENVKELEK---------- 69 (267)
T ss_dssp CTTCEEEETTCCSS--SSHHHHHHHHHHHT---------------SCEEEECBSSSSSH-HHHHHHHHHH----------
T ss_pred cCCCEEEEECCCCC--CChHHHHHHHHHHC---------------CCeEEEEeCCcchh-HHHHHHHHHH----------
Confidence 56899999995411 13322223444322 56777777764322 1233333221
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
....++.++.+|++++ ++++.+++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 70 --~~~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 141 (267)
T 3gdg_A 70 --TYGIKAKAYKCQVDSY------ESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAK 141 (267)
T ss_dssp --HHCCCEECCBCCTTCH------HHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred --hcCCceeEEecCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHH
Confidence 0124788999999987 77776665 46999999997532 24456789999999999999
Q ss_pred HH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+ ++. +..++|++||........ + .....|+.||+..+.
T Consensus 142 ~~~~~~~~~-~~g~iv~isS~~~~~~~~-------~-----------------------------~~~~~Y~~sK~a~~~ 184 (267)
T 3gdg_A 142 AVGHHFKER-GTGSLVITASMSGHIANF-------P-----------------------------QEQTSYNVAKAGCIH 184 (267)
T ss_dssp HHHHHHHHH-TCCEEEEECCGGGTSCCS-------S-----------------------------SCCHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCceEEEEccccccccCC-------C-----------------------------CCCCcchHHHHHHHH
Confidence 87 333 457999999976542210 0 011679999999999
Q ss_pred HHHHc----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ...+.+..+.||.+..+
T Consensus 185 ~~~~la~e~~~~i~v~~v~PG~v~t~ 210 (267)
T 3gdg_A 185 MARSLANEWRDFARVNSISPGYIDTG 210 (267)
T ss_dssp HHHHHHHHTTTTCEEEEEEECCEECS
T ss_pred HHHHHHHHhccCcEEEEEECCccccc
Confidence 88765 23477888888877653
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.01 E-value=3.4e-09 Score=111.90 Aligned_cols=166 Identities=16% Similarity=0.161 Sum_probs=108.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+...++...
T Consensus 26 ~~~k~vlITGasggIG~~l----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~~--------- 75 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREM----AYHLAK---------------MGAHVVVTARSKET--LQKVVSHCLEL--------- 75 (286)
T ss_dssp GTTCEEEESSCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHHH---------
T ss_pred cCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEECCHHH--HHHHHHHHHHh---------
Confidence 5579999999544433332 233322 25678888886431 11111111110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcC-cccCc------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCA-ATVRF------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~A-a~v~f------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++.+++ ++|++||+| +.... .+..+..+++|+.|+.++++
T Consensus 76 ---~~~~~~~~~~Dl~d~------~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 146 (286)
T 1xu9_A 76 ---GAASAHYIAGTMEDM------TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTV 146 (286)
T ss_dssp ---TCSEEEEEECCTTCH------HHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---CCCceEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHH
Confidence 013688999999987 66666655 689999994 54321 24456788999999999998
Q ss_pred HHHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 318 MAKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 318 ~a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
++... .+..++|++||...+.... ....|+.||...|.++
T Consensus 147 ~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~ 188 (286)
T 1xu9_A 147 AALPMLKQSNGSIVVVSSLAGKVAYP--------------------------------------MVAAYSASKFALDGFF 188 (286)
T ss_dssp HHHHHHHHHTCEEEEEEEGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEECCcccccCCC--------------------------------------CccHHHHHHHHHHHHH
Confidence 87542 1236999999987543210 1168999999999887
Q ss_pred HHc-------CCCCcEEEecCCeEEe
Q psy16243 396 RRG-------GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 396 ~~~-------~~glp~~IvRp~~v~G 414 (782)
... ..++.+++++||.+..
T Consensus 189 ~~l~~e~~~~~~~i~v~~v~Pg~v~t 214 (286)
T 1xu9_A 189 SSIRKEYSVSRVNVSITLCVLGLIDT 214 (286)
T ss_dssp HHHHHHHHHHTCCCEEEEEEECCBCC
T ss_pred HHHHHHHhhcCCCeEEEEeecCccCC
Confidence 654 3478889999887754
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.01 E-value=3.9e-09 Score=113.85 Aligned_cols=173 Identities=16% Similarity=0.107 Sum_probs=110.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeee-cccchhhHHHHHHHhhcccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSI-NLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~Lv-R~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|+++. |... ...+..+++..
T Consensus 44 l~~k~~lVTGas~GIG~ai----a~~La~---------------~G~~Vv~~~~r~~~--~~~~~~~~l~~--------- 93 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSI----AEGLHA---------------EGYAVCLHYHRSAA--EANALSATLNA--------- 93 (328)
T ss_dssp -CCCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESSCHH--HHHHHHHHHHH---------
T ss_pred cCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEcCCCHH--HHHHHHHHHHh---------
Confidence 4578999999654444333 233322 256788887 7532 12221222110
Q ss_pred cCcccccceeEEecCCCCCC-----------CCCCHHhHHHHhc-------CceEEEEcCcccCc---------------
Q psy16243 251 RCPHYLSKMVAVTGDCLKPG-----------VGINSEDRQTLVD-------NIHVVFHCAATVRF--------------- 297 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~-----------lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------------- 297 (782)
....++.++.+|++++. .+-+..+++.+++ .+|++||+||....
T Consensus 94 ---~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~ 170 (328)
T 2qhx_A 94 ---RRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCV 170 (328)
T ss_dssp ---HSTTCEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC----------
T ss_pred ---hcCCeEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCcccccccc
Confidence 00136889999999983 0000005555554 68999999997432
Q ss_pred ------hhhHHHHHHhhHHHHHHHHHHHHHc---cC------CceEEEEecceeccCCCcccccccCCCCChhHHHHHHH
Q psy16243 298 ------DAHLKVAVSINLRATKALLEMAKEM---KQ------LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITE 362 (782)
Q Consensus 298 ------~~~~~~~~~~Nv~gt~~Lle~a~~~---~~------~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~ 362 (782)
.+.++..+++|+.|+..+++++... .+ ..++|++||...+...
T Consensus 171 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~---------------------- 228 (328)
T 2qhx_A 171 GDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL---------------------- 228 (328)
T ss_dssp ---CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC----------------------
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCC----------------------
Confidence 3345568899999999999886532 13 5799999998654321
Q ss_pred hcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 363 LLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 363 ~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+....|+.||...+.+.+.. ..|+.+.+++||.|..+
T Consensus 229 ----------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 270 (328)
T 2qhx_A 229 ----------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 270 (328)
T ss_dssp ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred ----------------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCC
Confidence 01168999999999988765 34899999999988764
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=5.8e-09 Score=108.91 Aligned_cols=168 Identities=15% Similarity=0.171 Sum_probs=112.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|... ...+..+++.. .
T Consensus 6 l~~k~~lVTGas~GIG~ai----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~l~~---------~ 55 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLAT----VELLLE---------------AGAAVAFCARDGE--RLRAAESALRQ---------R 55 (265)
T ss_dssp CTTCEEEEETCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHHH---------H
T ss_pred cCCCEEEEeCCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHH---------h
Confidence 4589999999644433332 233332 2567888887632 12222222211 0
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
.+ ..++.++.+|++++ ++.+.+++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 56 ~~--~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 127 (265)
T 3lf2_A 56 FP--GARLFASVCDVLDA------LQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVR 127 (265)
T ss_dssp ST--TCCEEEEECCTTCH------HHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cC--CceEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 01 13588999999987 67666654 57999999997432 24456789999999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+-.++|++||........ ....|+.||...+.+
T Consensus 128 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l 169 (265)
T 3lf2_A 128 AFLPQLESRADAAIVCVNSLLASQPEP--------------------------------------HMVATSAARAGVKNL 169 (265)
T ss_dssp HHHHHHTTSTTEEEEEEEEGGGTSCCT--------------------------------------TBHHHHHHHHHHHHH
T ss_pred HHHHHhhccCCeEEEEECCcccCCCCC--------------------------------------CchhhHHHHHHHHHH
Confidence 87542 2356899999986542210 016899999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..++||.|..+
T Consensus 170 ~~~la~e~~~~gi~vn~v~PG~v~t~ 195 (265)
T 3lf2_A 170 VRSMAFEFAPKGVRVNGILIGLVESG 195 (265)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHhcccCeEEEEEEeCcCcCc
Confidence 8765 34899999999988764
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.00 E-value=2.9e-09 Score=111.88 Aligned_cols=167 Identities=16% Similarity=0.193 Sum_probs=112.4
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|..... .+..+++..
T Consensus 30 ~l~gk~~lVTGas~GIG~ai----a~~la~---------------~G~~V~~~~r~~~~~--~~~~~~~~~--------- 79 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAI----AEGLAG---------------AGAHVILHGVKPGST--AAVQQRIIA--------- 79 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESSTTTT--HHHHHHHHH---------
T ss_pred CCCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEcCCHHHH--HHHHHHHHh---------
Confidence 35689999999544333322 333332 256788888864321 222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++.+.+++ .+|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 80 ----~~~~~~~~~~Dv~~~------~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 149 (275)
T 4imr_A 80 ----SGGTAQELAGDLSEA------GAGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQ 149 (275)
T ss_dssp ----TTCCEEEEECCTTST------THHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----cCCeEEEEEecCCCH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 124788999999998 66666655 68999999996422 14456789999999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+..++|++||...+... .....|+.||...+.+
T Consensus 150 ~~~~~m~~~~~g~Iv~isS~~~~~~~--------------------------------------~~~~~Y~asKaa~~~l 191 (275)
T 4imr_A 150 SALPKMVARKWGRVVSIGSINQLRPK--------------------------------------SVVTAYAATKAAQHNL 191 (275)
T ss_dssp HHHHHHHHHTCEEEEEECCGGGTSCC--------------------------------------TTBHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEEECCHHhCCCC--------------------------------------CCchhhHHHHHHHHHH
Confidence 86321 256799999998654311 0015699999999988
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..++||.|..+
T Consensus 192 ~~~la~e~~~~gI~vn~v~PG~v~T~ 217 (275)
T 4imr_A 192 IQSQARDFAGDNVLLNTLAPGLVDTD 217 (275)
T ss_dssp HHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred HHHHHHHhcccCcEEEEEEeccccCc
Confidence 8765 34899999999988754
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.7e-09 Score=113.79 Aligned_cols=164 Identities=12% Similarity=0.109 Sum_probs=109.7
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|... ...+..+++
T Consensus 27 ~l~~k~vlVTGas~GIG~ai----a~~l~~---------------~G~~Vi~~~r~~~--~~~~~~~~~----------- 74 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEAT----VRRLHA---------------DGLGVVIADLAAE--KGKALADEL----------- 74 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHH-----------
T ss_pred ccCCCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEeCChH--HHHHHHHHh-----------
Confidence 35689999999644444333 333332 2567888887532 111111111
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCc-------------hhhHHHHHHhhHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRF-------------DAHLKVAVSINLRA 311 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f-------------~~~~~~~~~~Nv~g 311 (782)
..++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|
T Consensus 75 -----~~~~~~~~~Dl~~~------~~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 143 (281)
T 3ppi_A 75 -----GNRAEFVSTNVTSE------DSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNG 143 (281)
T ss_dssp -----CTTEEEEECCTTCH------HHHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHH
T ss_pred -----CCceEEEEcCCCCH------HHHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHH
Confidence 13788999999987 77777665 57999999553211 12356789999999
Q ss_pred HHHHHHHHHHc---------cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCc
Q psy16243 312 TKALLEMAKEM---------KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPN 382 (782)
Q Consensus 312 t~~Lle~a~~~---------~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn 382 (782)
+.++++++... ++-.++|++||...+.... ...
T Consensus 144 ~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~ 185 (281)
T 3ppi_A 144 TYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI--------------------------------------GQT 185 (281)
T ss_dssp HHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT--------------------------------------TCH
T ss_pred HHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC--------------------------------------CCc
Confidence 99999987532 1345899999987653210 116
Q ss_pred cHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 383 TYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 383 ~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.|+.||...+.+.+.. ..|+.+..++||.|..+
T Consensus 186 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 223 (281)
T 3ppi_A 186 AYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTP 223 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred ccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCch
Confidence 8999999888887665 34899999999888653
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.6e-09 Score=110.65 Aligned_cols=168 Identities=15% Similarity=0.160 Sum_probs=107.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+.+|..+ .+.|... +.+|+++.|.... ..+..+++...
T Consensus 5 ~~~k~~lVTGas~GIG~ai----a~~l~~~---------------G~~V~~~~r~~~~--~~~~~~~~~~~--------- 54 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVI----AAGLATD---------------GYRVVLIARSKQN--LEKVHDEIMRS--------- 54 (250)
T ss_dssp CCCCEEEEESTTSHHHHHH----HHHHHHH---------------TCEEEEEESCHHH--HHHHHHHHHHH---------
T ss_pred CCCCEEEEECCCcHHHHHH----HHHHHHC---------------CCEEEEEECCHHH--HHHHHHHHHHh---------
Confidence 3478999999644444333 2333221 5678888886431 22222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc---h---hhHHHHHHhhHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF---D---AHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f---~---~~~~~~~~~Nv~gt~~Lle~ 318 (782)
. ....++.++.+|++++ ++.+++++ .+|++||+||.... . +.++..+++|+.|+..++++
T Consensus 55 ~-~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 127 (250)
T 3nyw_A 55 N-KHVQEPIVLPLDITDC------TKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKT 127 (250)
T ss_dssp C-TTSCCCEEEECCTTCH------HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHH
T ss_pred c-cccCcceEEeccCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0114788999999987 77766665 57999999997432 2 34567889999999999988
Q ss_pred HHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+... .+..++|++||........ ....|+.||...+.+.
T Consensus 128 ~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~ 169 (250)
T 3nyw_A 128 VTEIMKVQKNGYIFNVASRAAKYGFA--------------------------------------DGGIYGSTKFALLGLA 169 (250)
T ss_dssp HHHHHHHHTCEEEEEECC-------C--------------------------------------CTTHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCeEEEEEccHHhcCCCC--------------------------------------CCcchHHHHHHHHHHH
Confidence 6321 2567999999986542110 0168999999999888
Q ss_pred HHc-----CCCCcEEEecCCeEEe
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G 414 (782)
+.. ..|+++..++||.|..
T Consensus 170 ~~la~e~~~~gi~vn~v~PG~v~T 193 (250)
T 3nyw_A 170 ESLYRELAPLGIRVTTLCPGWVNT 193 (250)
T ss_dssp HHHHHHHGGGTEEEEEEEESSBCS
T ss_pred HHHHHHhhhcCcEEEEEecCcccC
Confidence 765 3489999999987764
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=98.98 E-value=3.2e-09 Score=108.32 Aligned_cols=160 Identities=13% Similarity=0.163 Sum_probs=107.3
Q ss_pred CeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCcc
Q psy16243 175 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPH 254 (782)
Q Consensus 175 k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~ 254 (782)
|+++|||..+..|..+ .+.|.. .+.+|+++.|... ++++..+.
T Consensus 2 k~vlVTGas~gIG~~~----a~~l~~---------------~G~~V~~~~r~~~------~~~~~~~~------------ 44 (230)
T 3guy_A 2 SLIVITGASSGLGAEL----AKLYDA---------------EGKATYLTGRSES------KLSTVTNC------------ 44 (230)
T ss_dssp -CEEEESTTSHHHHHH----HHHHHH---------------TTCCEEEEESCHH------HHHHHHHT------------
T ss_pred CEEEEecCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHH------HHHHHHHH------------
Confidence 6899999644444333 233322 2567888888632 22222110
Q ss_pred cccceeEEecCCCCCCCCCCHHhHHHHhcCc----eEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 255 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNI----HVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 255 ~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~v----diViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
...++.++.+|++++ ++++++++.+ |++||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 45 ~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 118 (230)
T 3guy_A 45 LSNNVGYRARDLASH------QEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRY 118 (230)
T ss_dssp CSSCCCEEECCTTCH------HHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhccCeEeecCCCH------HHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 124688899999987 8888888765 899999996432 1445678899999999999987543
Q ss_pred -cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---
Q psy16243 323 -KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--- 398 (782)
Q Consensus 323 -~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--- 398 (782)
++-.++|++||...+.... ....|+.||...+.+.+..
T Consensus 119 ~~~~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e 160 (230)
T 3guy_A 119 KDQPVNVVMIMSTAAQQPKA--------------------------------------QESTYCAVKWAVKGLIESVRLE 160 (230)
T ss_dssp TTSCCEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCeEEEEeecccCCCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHH
Confidence 1123899999987653210 1168999999999988765
Q ss_pred --CCCCcEEEecCCeEEec
Q psy16243 399 --GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 --~~glp~~IvRp~~v~G~ 415 (782)
..|+.+..++||.+..+
T Consensus 161 ~~~~gi~v~~v~PG~v~t~ 179 (230)
T 3guy_A 161 LKGKPMKIIAVYPGGMATE 179 (230)
T ss_dssp TTTSSCEEEEEEECCC---
T ss_pred HHhcCeEEEEEECCcccCh
Confidence 34899999999887653
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.98 E-value=7e-09 Score=107.52 Aligned_cols=115 Identities=20% Similarity=0.175 Sum_probs=88.6
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHHHHH--
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALLEMA-- 319 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Lle~a-- 319 (782)
.++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.++++++
T Consensus 50 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 123 (254)
T 3kzv_A 50 DRFFYVVGDITED------SVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALP 123 (254)
T ss_dssp GGEEEEESCTTSH------HHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEECCCCCH------HHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3788999999997 77777665 67999999997432 1445678999999999999987
Q ss_pred --HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 320 --KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 320 --~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
++. + .++|++||...+.... ....|+.||...+.+.+.
T Consensus 124 ~m~~~-~-g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~ 163 (254)
T 3kzv_A 124 ELKKT-N-GNVVFVSSDACNMYFS--------------------------------------SWGAYGSSKAALNHFAMT 163 (254)
T ss_dssp HHHHH-T-CEEEEECCSCCCCSSC--------------------------------------CSHHHHHHHHHHHHHHHH
T ss_pred HHHhc-C-CeEEEEcCchhccCCC--------------------------------------CcchHHHHHHHHHHHHHH
Confidence 443 3 7999999987543210 116899999999998876
Q ss_pred c---CCCCcEEEecCCeEEeccC
Q psy16243 398 G---GAGMPVAMVRPSIVIATNK 417 (782)
Q Consensus 398 ~---~~glp~~IvRp~~v~G~~~ 417 (782)
. ..++.+..++||.|..+..
T Consensus 164 la~e~~~i~vn~v~PG~v~t~~~ 186 (254)
T 3kzv_A 164 LANEERQVKAIAVAPGIVDTDMQ 186 (254)
T ss_dssp HHHHCTTSEEEEEECSSCCCCCS
T ss_pred HHhhccCcEEEEEeCCcccchhH
Confidence 6 2589999999999887643
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.5e-09 Score=112.61 Aligned_cols=155 Identities=21% Similarity=0.226 Sum_probs=106.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|....
T Consensus 19 l~~k~vlVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~~---------------------- 57 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAI----ARAFAD---------------AGDKVAITYRSGEP---------------------- 57 (253)
T ss_dssp -CCCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESSSCC----------------------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEeCChHh----------------------
Confidence 4578999999644444332 233332 25678888775321
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++++++++. +|++||+|+.... .+.++..+++|+.|+.++++
T Consensus 58 ----~~~~~~~~~Dl~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 127 (253)
T 2nm0_A 58 ----PEGFLAVKCDITDT------EQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVK 127 (253)
T ss_dssp ----CTTSEEEECCTTSH------HHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHH
T ss_pred ----hccceEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 11367889999987 777766653 6999999997532 23466789999999999998
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+..++|++||........ . ...|+.||...|.+
T Consensus 128 ~~~~~m~~~~~g~iv~isS~~~~~~~~-------------~-------------------------~~~Y~asK~a~~~~ 169 (253)
T 2nm0_A 128 RANRAMLRAKKGRVVLISSVVGLLGSA-------------G-------------------------QANYAASKAGLVGF 169 (253)
T ss_dssp HHHHHHHHHTCEEEEEECCCCCCCCHH-------------H-------------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEECchhhCCCCC-------------C-------------------------cHHHHHHHHHHHHH
Confidence 76432 2567999999986542100 0 05799999999988
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+.+++||.+..+
T Consensus 170 ~~~la~e~~~~gi~vn~v~PG~v~T~ 195 (253)
T 2nm0_A 170 ARSLARELGSRNITFNVVAPGFVDTD 195 (253)
T ss_dssp HHHHHHHHCSSSEEEEEEEECSBCC-
T ss_pred HHHHHHHhhhcCeEEEEEEeCcCcCc
Confidence 8764 35899999999987653
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.98 E-value=5.5e-09 Score=107.04 Aligned_cols=160 Identities=16% Similarity=0.173 Sum_probs=107.6
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... . +.+.+..
T Consensus 3 ~k~vlVTGas~GIG~a~----a~~l~~---------------~G~~V~~~~r~~~~--~-~~~~~~~------------- 47 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRAL----TIGLVE---------------RGHQVSMMGRRYQR--L-QQQELLL------------- 47 (235)
T ss_dssp CCEEEEESTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--H-HHHHHHH-------------
T ss_pred CCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEECCHHH--H-HHHHHHh-------------
Confidence 58999999644444333 233322 25678888886321 1 1221111
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
..++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+..+++.+
T Consensus 48 --~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 119 (235)
T 3l6e_A 48 --GNAVIGIVADLAHH------EDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQT 119 (235)
T ss_dssp --GGGEEEEECCTTSH------HHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --cCCceEEECCCCCH------HHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 12588999999987 77776665 57999999997532 2445678999999999998887
Q ss_pred HHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 320 KEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 320 ~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
... .+-.++|++||........ ....|+.||...+.+.+.
T Consensus 120 ~~~~~~~~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~ 161 (235)
T 3l6e_A 120 VRLIGERGGVLANVLSSAAQVGKA--------------------------------------NESLYCASKWGMRGFLES 161 (235)
T ss_dssp HHHHTTTCEEEEEECCEECCSSCS--------------------------------------SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEeCHHhcCCCC--------------------------------------CCcHHHHHHHHHHHHHHH
Confidence 432 1123899999986543210 016799999999998876
Q ss_pred c-----CCCCcEEEecCCeEEe
Q psy16243 398 G-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G 414 (782)
. ..|+.+..++||.|..
T Consensus 162 la~e~~~~gi~v~~v~PG~v~T 183 (235)
T 3l6e_A 162 LRAELKDSPLRLVNLYPSGIRS 183 (235)
T ss_dssp HHHHTTTSSEEEEEEEEEEECC
T ss_pred HHHHhhccCCEEEEEeCCCccC
Confidence 5 3488999999988764
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.97 E-value=2.7e-09 Score=112.30 Aligned_cols=169 Identities=18% Similarity=0.196 Sum_probs=113.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++...
T Consensus 4 l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~~--------- 53 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTT----AILFAQ---------------EGANVTITGRSSER--LEETRQIILKS--------- 53 (280)
T ss_dssp TTTCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHTT---------
T ss_pred CCCCEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHHc---------
Confidence 4578999999544443332 233322 25678888886421 22222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----------hhhHHHHHHhhHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----------DAHLKVAVSINLRATK 313 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~ 313 (782)
.....++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.
T Consensus 54 -~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 126 (280)
T 1xkq_A 54 -GVSEKQVNSVVADVTTE------DGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 126 (280)
T ss_dssp -TCCGGGEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHH
T ss_pred -CCCCcceEEEEecCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHH
Confidence 00112688999999987 77776665 58999999996532 1345678899999999
Q ss_pred HHHHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 314 ALLEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 314 ~Lle~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
++++.+... .+ .++|++||...+.... + ....|+.||..
T Consensus 127 ~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~--------------------------------~-----~~~~Y~asK~a 168 (280)
T 1xkq_A 127 EMTKKVKPHLVASK-GEIVNVSSIVAGPQAQ--------------------------------P-----DFLYYAIAKAA 168 (280)
T ss_dssp HHHHHHHHHHHHHT-CEEEEECCGGGSSSCC--------------------------------C-----SSHHHHHHHHH
T ss_pred HHHHHHHHHhhcCC-CcEEEecCccccCCCC--------------------------------C-----cccHHHHHHHH
Confidence 999987542 13 7999999986543210 0 01679999999
Q ss_pred HHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 391 AEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 391 aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.|.+.+.. ..|+++.+++||.|.++
T Consensus 169 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 198 (280)
T 1xkq_A 169 LDQYTRSTAIDLAKFGIRVNSVSPGMVETG 198 (280)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred HHHHHHHHHHHhccCCeEEEEEeeCcCcCC
Confidence 99988765 35899999999999875
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=2.9e-09 Score=109.91 Aligned_cols=165 Identities=15% Similarity=0.149 Sum_probs=111.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++..
T Consensus 5 l~~k~~lVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~l~~---------- 53 (247)
T 2jah_A 5 LQGKVALITGASSGIGEAT----ARALAA---------------EGAAVAIAARRVE--KLRALGDELTA---------- 53 (247)
T ss_dssp TTTCEEEEESCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHHH----------
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEECCHH--HHHHHHHHHHh----------
Confidence 4578999999644444333 233322 2567888888632 11111222111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 54 ---~~~~~~~~~~Dv~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 124 (247)
T 2jah_A 54 ---AGAKVHVLELDVADR------QGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTR 124 (247)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---cCCcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 113688899999987 77776665 68999999996432 13456789999999999999
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+ .++|++||...+.... ....|+.||...+.+
T Consensus 125 ~~~~~~~~~~-g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~ 165 (247)
T 2jah_A 125 AALPHLLRSK-GTVVQMSSIAGRVNVR--------------------------------------NAAVYQATKFGVNAF 165 (247)
T ss_dssp HHHHHHHHHT-CEEEEECCGGGTCCCT--------------------------------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCC-CEEEEEccHHhcCCCC--------------------------------------CCcHHHHHHHHHHHH
Confidence 86532 24 7999999986543210 116799999998888
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+++.+++||.+..+
T Consensus 166 ~~~la~e~~~~gi~v~~v~PG~v~T~ 191 (247)
T 2jah_A 166 SETLRQEVTERGVRVVVIEPGTTDTE 191 (247)
T ss_dssp HHHHHHHHGGGTCEEEEEEECSBSSS
T ss_pred HHHHHHHhcccCcEEEEEECCCCCCc
Confidence 7665 35899999999988754
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=5.1e-09 Score=108.22 Aligned_cols=113 Identities=12% Similarity=0.131 Sum_probs=86.7
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----c----hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----F----DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f----~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
++.++.+|++++ ++++++++ .+|++||+||... + .+.++..+++|+.|+.++++.+...
T Consensus 47 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 120 (248)
T 3asu_A 47 NLYIAQLDVRNR------AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPG 120 (248)
T ss_dssp TEEEEECCTTCH------HHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceEEEEcCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 688899999987 78887766 5799999999642 1 1345678999999999998886521
Q ss_pred ---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 ---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 ---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+..++|++||....... + ....|+.||+..|.+.+..
T Consensus 121 m~~~~~g~iv~isS~~~~~~~---------------------------------~-----~~~~Y~asKaa~~~~~~~la 162 (248)
T 3asu_A 121 MVERNHGHIINIGSTAGSWPY---------------------------------A-----GGNVYGATKAFVRQFSLNLR 162 (248)
T ss_dssp HHHHTCCEEEEECCGGGTSCC---------------------------------T-----TCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCceEEEEccchhccCC---------------------------------C-----CCchHHHHHHHHHHHHHHHH
Confidence 256799999998754321 0 0168999999999988764
Q ss_pred ----CCCCcEEEecCCeEEe
Q psy16243 399 ----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G 414 (782)
..|+.+.+++||.|.|
T Consensus 163 ~e~~~~gi~v~~v~PG~v~g 182 (248)
T 3asu_A 163 TDLHGTAVRVTDIEPGLVGG 182 (248)
T ss_dssp HHTTTSCCEEEEEEECSBCC
T ss_pred HHhhhcCcEEEEEecccccc
Confidence 3489999999999874
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.95 E-value=1.8e-09 Score=113.13 Aligned_cols=162 Identities=22% Similarity=0.255 Sum_probs=111.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... .+.+.+.
T Consensus 7 l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~---~~~~~~~------------ 52 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGI----VRAFVN---------------SGARVVICDKDESG---GRALEQE------------ 52 (270)
T ss_dssp TTTCEEEEETCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH---HHHHHHH------------
T ss_pred CCCCEEEEECCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH---HHHHHHH------------
Confidence 4579999999544443332 233322 25678888875321 1111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Ll 316 (782)
..++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.+++
T Consensus 53 ----~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 122 (270)
T 1yde_A 53 ----LPGAVFILCDVTQE------DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 122 (270)
T ss_dssp ----CTTEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ----hcCCeEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence 12477899999987 77777665 67999999987432 1345678899999999999
Q ss_pred HHHHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 317 EMAKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 317 e~a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+++... .+..++|++||........ ....|+.||...|.+
T Consensus 123 ~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~ 164 (270)
T 1yde_A 123 KLALPYLRKSQGNVINISSLVGAIGQA--------------------------------------QAVPYVATKGAVTAM 164 (270)
T ss_dssp HHHHHHHHHHTCEEEEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEcCccccCCCC--------------------------------------CCcccHHHHHHHHHH
Confidence 987531 1247999999975432100 015799999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+++.++|||.+.++
T Consensus 165 ~~~la~e~~~~gi~vn~v~Pg~v~t~ 190 (270)
T 1yde_A 165 TKALALDESPYGVRVNCISPGNIWTP 190 (270)
T ss_dssp HHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred HHHHHHHhhhhCcEEEEEEeCccccc
Confidence 8775 35899999999999875
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=2e-09 Score=122.33 Aligned_cols=112 Identities=21% Similarity=0.294 Sum_probs=89.4
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCc------eEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHcc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNI------HVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEMK 323 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~v------diViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~~ 323 (782)
.++.++.+|++++ +++..+++.+ |+|||+|+.... .+.++..+++|+.|+.++.+++...
T Consensus 279 ~~v~~~~~Dv~d~------~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~- 351 (486)
T 2fr1_A 279 ARTTVAACDVTDR------ESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL- 351 (486)
T ss_dssp CEEEEEECCTTCH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-
T ss_pred CEEEEEEeCCCCH------HHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-
Confidence 3788999999998 8888888765 999999997543 1345567889999999999999876
Q ss_pred CCceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-CCC
Q psy16243 324 QLKSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-GAG 401 (782)
Q Consensus 324 ~~~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-~~g 401 (782)
++.+||++||.+.. +... ...|+.+|...+.+.... ..|
T Consensus 352 ~~~~~V~~SS~a~~~g~~g---------------------------------------~~~Yaaaka~l~~la~~~~~~g 392 (486)
T 2fr1_A 352 DLTAFVLFSSFASAFGAPG---------------------------------------LGGYAPGNAYLDGLAQQRRSDG 392 (486)
T ss_dssp CCSEEEEEEEHHHHTCCTT---------------------------------------CTTTHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEcChHhcCCCCC---------------------------------------CHHHHHHHHHHHHHHHHHHhcC
Confidence 78999999997543 3211 167999999999987765 469
Q ss_pred CcEEEecCCeEEe
Q psy16243 402 MPVAMVRPSIVIA 414 (782)
Q Consensus 402 lp~~IvRp~~v~G 414 (782)
+++++++||.+.+
T Consensus 393 i~v~~i~pG~~~~ 405 (486)
T 2fr1_A 393 LPATAVAWGTWAG 405 (486)
T ss_dssp CCCEEEEECCBC-
T ss_pred CeEEEEECCeeCC
Confidence 9999999987765
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=98.95 E-value=3.5e-09 Score=108.66 Aligned_cols=161 Identities=17% Similarity=0.157 Sum_probs=105.8
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... . .+++
T Consensus 2 ~k~vlVTGas~giG~~~----a~~l~~---------------~G~~V~~~~r~~~~--~---~~~~-------------- 43 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAI----AEALVA---------------RGYRVAIASRNPEE--A---AQSL-------------- 43 (239)
T ss_dssp CCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESSCHH--H---HHHH--------------
T ss_pred CCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--H---HHhh--------------
Confidence 57899999544444332 233322 25678888886432 1 1110
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHH---HhcCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQT---LVDNIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~---l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
.+.++.+|+++..+ .+.+++ ....+|++||+|+.... .+.++..+++|+.|+.++++.+...
T Consensus 44 ----~~~~~~~D~~~~~~---~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 116 (239)
T 2ekp_A 44 ----GAVPLPTDLEKDDP---KGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHM 116 (239)
T ss_dssp ----TCEEEECCTTTSCH---HHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ----CcEEEecCCchHHH---HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 25678899987321 111222 23478999999996432 2446678899999999998886421
Q ss_pred --cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 323 --KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 323 --~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
.+..++|++||...+.... ++ ....|+.||...|.+.+..
T Consensus 117 ~~~~~g~iv~isS~~~~~~~~-------~~-----------------------------~~~~Y~~sK~a~~~~~~~la~ 160 (239)
T 2ekp_A 117 AEAGWGRVLFIGSVTTFTAGG-------PV-----------------------------PIPAYTTAKTALLGLTRALAK 160 (239)
T ss_dssp HHHTCEEEEEECCGGGTSCCT-------TS-----------------------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCcEEEEECchhhccCCC-------CC-----------------------------CCccHHHHHHHHHHHHHHHHH
Confidence 2568999999987654311 00 1168999999999988765
Q ss_pred ---CCCCcEEEecCCeEEec
Q psy16243 399 ---GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 ---~~glp~~IvRp~~v~G~ 415 (782)
..|+++.++|||.+.++
T Consensus 161 e~~~~gi~v~~v~Pg~v~t~ 180 (239)
T 2ekp_A 161 EWARLGIRVNLLCPGYVETE 180 (239)
T ss_dssp HHGGGTEEEEEEEECSBCSG
T ss_pred HhhhcCcEEEEEEeCCccCc
Confidence 34899999999998764
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.9e-09 Score=111.75 Aligned_cols=164 Identities=20% Similarity=0.192 Sum_probs=109.3
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|... ...+..+++
T Consensus 25 ~~~~k~~lVTGas~GIG~ai----a~~la~---------------~G~~V~~~~r~~~--~~~~~~~~~----------- 72 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAV----AVALAG---------------AGYGVALAGRRLD--ALQETAAEI----------- 72 (272)
T ss_dssp ---CCEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHH-----------
T ss_pred CCCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEECCHH--HHHHHHHHh-----------
Confidence 35589999999644444333 233332 2567888877532 122222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~L 315 (782)
..++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.++
T Consensus 73 -----~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~ 141 (272)
T 4dyv_A 73 -----GDDALCVPTDVTDP------DSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLC 141 (272)
T ss_dssp -----TSCCEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred -----CCCeEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHH
Confidence 13688999999998 77777766 68999999997432 134567899999998888
Q ss_pred HHHHHHc---cC--CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 316 LEMAKEM---KQ--LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 316 le~a~~~---~~--~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
++++... .+ -.++|++||...+.... ....|+.||..
T Consensus 142 ~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaa 183 (272)
T 4dyv_A 142 TQEAFRVMKAQEPRGGRIINNGSISATSPRP--------------------------------------YSAPYTATKHA 183 (272)
T ss_dssp HHHHHHHHHHSSSCCEEEEEECCSSTTSCCT--------------------------------------TCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcEEEEECchhhcCCCC--------------------------------------CchHHHHHHHH
Confidence 8876432 11 36899999986543210 11679999999
Q ss_pred HHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 391 AEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 391 aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.+.. ..|+.+..++||.|..+
T Consensus 184 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 213 (272)
T 4dyv_A 184 ITGLTKSTSLDGRVHDIACGQIDIGNADTP 213 (272)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEEEECC--
T ss_pred HHHHHHHHHHHhCccCEEEEEEEECcccCh
Confidence 99998765 34899999999988764
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.8e-09 Score=111.45 Aligned_cols=159 Identities=13% Similarity=0.139 Sum_probs=111.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+.+|..+ .+.|.. .+.+|+++.|... ++++..
T Consensus 14 ~~~k~vlVTGas~gIG~ai----a~~l~~---------------~G~~V~~~~r~~~------~~~~~~----------- 57 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAI----ARRFSE---------------EGHPLLLLARRVE------RLKALN----------- 57 (266)
T ss_dssp -CCCEEEEESTTSHHHHHH----HHHHHH---------------TTCCEEEEESCHH------HHHTTC-----------
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEECCHH------HHHHhh-----------
Confidence 4579999999644444333 233332 2567888887532 232211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+.++++
T Consensus 58 ----~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~ 127 (266)
T 3p19_A 58 ----LPNTLCAQVDVTDK------YTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQ 127 (266)
T ss_dssp ----CTTEEEEECCTTCH------HHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----cCCceEEEecCCCH------HHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 12678899999987 77777665 68999999997532 24456789999999999877
Q ss_pred HHH----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAK----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+. +. +..++|++||...+.... ....|+.||...+.
T Consensus 128 ~~~~~~~~~-~~g~IV~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~ 168 (266)
T 3p19_A 128 AVLAPMKAR-NCGTIINISSIAGKKTFP--------------------------------------DHAAYCGTKFAVHA 168 (266)
T ss_dssp HHHHHHHHH-TCCEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCcEEEEEcChhhCCCCC--------------------------------------CCchHHHHHHHHHH
Confidence 753 33 568999999987653210 11689999999998
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+.+.+++||.|.++
T Consensus 169 ~~~~la~e~~~~gi~vn~v~PG~v~T~ 195 (266)
T 3p19_A 169 ISENVREEVAASNVRVMTIAPSAVKTE 195 (266)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECSBSSS
T ss_pred HHHHHHHHhcccCcEEEEEeeCccccc
Confidence 88765 35899999999998764
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.7e-09 Score=123.36 Aligned_cols=111 Identities=19% Similarity=0.278 Sum_probs=89.5
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHccCCce
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEMKQLKS 327 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~ 327 (782)
.++.++.+|++++ +++..++++ +|+|||+|+..... +.++..+++|+.|+.++.+++..++++.+
T Consensus 312 ~~v~~~~~Dvtd~------~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~ 385 (511)
T 2z5l_A 312 CEVVHAACDVAER------DALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDA 385 (511)
T ss_dssp CEEEEEECCSSCH------HHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCC
T ss_pred CEEEEEEeCCCCH------HHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCE
Confidence 3688999999997 888888875 99999999976432 34567889999999999999876546789
Q ss_pred EEEEeccee-ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-CCCCcEE
Q psy16243 328 FVHVSTAYS-NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-GAGMPVA 405 (782)
Q Consensus 328 fV~vST~~v-~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-~~glp~~ 405 (782)
||++||... ++... ...|+.+|...|.+.... ..|++++
T Consensus 386 ~V~~SS~a~~~g~~g---------------------------------------~~~YaaaKa~ld~la~~~~~~gi~v~ 426 (511)
T 2z5l_A 386 FVLFSSVTGTWGNAG---------------------------------------QGAYAAANAALDALAERRRAAGLPAT 426 (511)
T ss_dssp EEEEEEGGGTTCCTT---------------------------------------BHHHHHHHHHHHHHHHHHHTTTCCCE
T ss_pred EEEEeCHHhcCCCCC---------------------------------------CHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 999999854 33211 167999999999998876 5699999
Q ss_pred EecCCeE
Q psy16243 406 MVRPSIV 412 (782)
Q Consensus 406 IvRp~~v 412 (782)
+++||.+
T Consensus 427 sv~pG~~ 433 (511)
T 2z5l_A 427 SVAWGLW 433 (511)
T ss_dssp EEEECCB
T ss_pred EEECCcc
Confidence 9998766
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.93 E-value=6.2e-09 Score=107.21 Aligned_cols=167 Identities=14% Similarity=0.176 Sum_probs=107.2
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++...
T Consensus 11 ~l~~k~vlITGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~~-------- 61 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAA----ARAYAA---------------HGASVVLLGRTEAS--LAEVSDQIKSA-------- 61 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHHT--------
T ss_pred cCCCCEEEEeCCCChHHHHH----HHHHHH---------------CCCEEEEEecCHHH--HHHHHHHHHhc--------
Confidence 45689999999544443332 233322 25678888886432 22222222110
Q ss_pred cCcccccceeEEecCC--CCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDC--LKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATK 313 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi--~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~ 313 (782)
...++.++..|+ +++ +++.++++ .+|++||+|+.... .+.++..+++|+.|+.
T Consensus 62 ----~~~~~~~~~~d~d~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 131 (247)
T 3i1j_A 62 ----GQPQPLIIALNLENATA------QQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATF 131 (247)
T ss_dssp ----TSCCCEEEECCTTTCCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHH
T ss_pred ----CCCCceEEEeccccCCH------HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence 113556677776 654 66665554 68999999997421 1456678999999999
Q ss_pred HHHHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 314 ALLEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 314 ~Lle~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
.+++.+... .+..++|++||........ ....|+.||+.
T Consensus 132 ~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a 173 (247)
T 3i1j_A 132 MLTRALLPLLKRSEDASIAFTSSSVGRKGRA--------------------------------------NWGAYGVSKFA 173 (247)
T ss_dssp HHHHHHHHHHTTSSSEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCeEEEEcchhhcCCCC--------------------------------------CcchhHHHHHH
Confidence 999987421 2457899999986543210 11689999999
Q ss_pred HHHHHHHc-----C-CCCcEEEecCCeEEe
Q psy16243 391 AEDMVRRG-----G-AGMPVAMVRPSIVIA 414 (782)
Q Consensus 391 aE~ll~~~-----~-~glp~~IvRp~~v~G 414 (782)
.|.+.+.. . .++.+..++||.+..
T Consensus 174 ~~~~~~~la~e~~~~~~i~v~~v~PG~v~t 203 (247)
T 3i1j_A 174 TEGLMQTLADELEGVTAVRANSINPGATRT 203 (247)
T ss_dssp HHHHHHHHHHHHTTTSSEEEEEEECCCCSS
T ss_pred HHHHHHHHHHHhcCCCCeEEEEEecCcccC
Confidence 99988765 2 478888888876653
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.92 E-value=3.4e-09 Score=107.61 Aligned_cols=109 Identities=13% Similarity=0.013 Sum_probs=79.2
Q ss_pred cCCCCCCCCCCHHhHHHHhc---CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHHHHHHHc-cCCceEEEE
Q psy16243 264 GDCLKPGVGINSEDRQTLVD---NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALLEMAKEM-KQLKSFVHV 331 (782)
Q Consensus 264 gDi~~~~lGl~~~~~~~l~~---~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Lle~a~~~-~~~~~fV~v 331 (782)
+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+.++++++... .+-.++|++
T Consensus 42 ~D~~~~------~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~ 115 (223)
T 3uce_A 42 LDISDE------KSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLT 115 (223)
T ss_dssp CCTTCH------HHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCCCH------HHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEe
Confidence 677766 66666665 68999999997521 2445678899999999999998653 122489999
Q ss_pred ecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC---CCCcEEEec
Q psy16243 332 STAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG---AGMPVAMVR 408 (782)
Q Consensus 332 ST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~---~glp~~IvR 408 (782)
||...+.... ....|+.||...|.+.+... ..+.+..++
T Consensus 116 sS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~ 157 (223)
T 3uce_A 116 SGMLSRKVVA--------------------------------------NTYVKAAINAAIEATTKVLAKELAPIRVNAIS 157 (223)
T ss_dssp CCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred cchhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHhhcCcEEEEEE
Confidence 9987543210 11689999999999887662 138888999
Q ss_pred CCeEEecc
Q psy16243 409 PSIVIATN 416 (782)
Q Consensus 409 p~~v~G~~ 416 (782)
||.+..+.
T Consensus 158 PG~v~t~~ 165 (223)
T 3uce_A 158 PGLTKTEA 165 (223)
T ss_dssp ECSBCSGG
T ss_pred eCCCcchh
Confidence 98887653
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.91 E-value=4.3e-09 Score=109.64 Aligned_cols=165 Identities=16% Similarity=0.158 Sum_probs=110.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+..+++..
T Consensus 5 l~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~--~~~~~~~~~~~---------- 53 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLAT----ALRLAE---------------EGTAIALLDMNRE--ALEKAEASVRE---------- 53 (262)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHHT----------
T ss_pred cCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEeCCHH--HHHHHHHHHHh----------
Confidence 4578999999654444333 233332 2567888888632 11111222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCccc-C---c----hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATV-R---F----DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v-~---f----~~~~~~~~~~Nv~gt~~Ll 316 (782)
.-.++.++.+|++++ ++++.+++ .+|++||+|+.. . + .+.++..+++|+.|+.+++
T Consensus 54 ---~~~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~ 124 (262)
T 1zem_A 54 ---KGVEARSYVCDVTSE------EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 124 (262)
T ss_dssp ---TTSCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---cCCcEEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHH
Confidence 113688899999987 67666655 689999999865 2 1 2345678899999999999
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+... .+..++|++||...+.... ....|+.||...+.
T Consensus 125 ~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~ 166 (262)
T 1zem_A 125 KAVSRQMITQNYGRIVNTASMAGVKGPP--------------------------------------NMAAYGTSKGAIIA 166 (262)
T ss_dssp HHHHHHHHHHTCEEEEEECCHHHHSCCT--------------------------------------TBHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEEEcchhhccCCC--------------------------------------CCchHHHHHHHHHH
Confidence 886542 2457999999986543210 01579999998888
Q ss_pred HHHHc-----CCCCcEEEecCCeEEe
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+.+.. ..|+.+.+++||.+..
T Consensus 167 ~~~~la~e~~~~gi~vn~v~PG~v~t 192 (262)
T 1zem_A 167 LTETAALDLAPYNIRVNAISPGYMGP 192 (262)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred HHHHHHHHHHhhCeEEEEEecCCcCc
Confidence 77664 3589999999998764
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.91 E-value=8.6e-09 Score=108.63 Aligned_cols=168 Identities=15% Similarity=0.098 Sum_probs=108.0
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
...+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... ..+..+++...
T Consensus 30 ~l~gk~~lVTGas~GIG~ai----a~~la~---------------~G~~V~~~~r~~~~--~~~~~~~~~~~-------- 80 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGI----AQALSA---------------EGYSVVITGRRPDV--LDAAAGEIGGR-------- 80 (281)
T ss_dssp ----CEEEETTTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHHH--------
T ss_pred CCCCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEECCHHH--HHHHHHHHHhc--------
Confidence 35689999999644444333 233332 25678888886431 22222222110
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~L 315 (782)
....+.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+..+
T Consensus 81 ----~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~ 150 (281)
T 4dry_A 81 ----TGNIVRAVVCDVGDP------DQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLC 150 (281)
T ss_dssp ----HSSCEEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred ----CCCeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence 112468899999998 77776665 56999999997422 245567899999998888
Q ss_pred HHHHHHc----c-CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 316 LEMAKEM----K-QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 316 le~a~~~----~-~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
.+++... + +-.++|++||....... +....|+.||..
T Consensus 151 ~~~~~~~~~~~~~~~g~IV~isS~~~~~~~--------------------------------------~~~~~Y~asKaa 192 (281)
T 4dry_A 151 TQHAFRMMKAQTPRGGRIINNGSISAQTPR--------------------------------------PNSAPYTATKHA 192 (281)
T ss_dssp HHHHHHHHHHSSSCCEEEEEECCGGGTCCC--------------------------------------TTCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcEEEEECCHHhCCCC--------------------------------------CCChhHHHHHHH
Confidence 8875432 1 14689999998654221 011689999999
Q ss_pred HHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 391 AEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 391 aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.+.. ..|+.+..++||.|..+
T Consensus 193 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 222 (281)
T 4dry_A 193 ITGLTKSTALDGRMHDIACGQIDIGNAATD 222 (281)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEEECBCC-
T ss_pred HHHHHHHHHHHhcccCeEEEEEEECcCcCh
Confidence 99988765 35899999999887654
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.3e-08 Score=106.72 Aligned_cols=161 Identities=16% Similarity=0.169 Sum_probs=108.5
Q ss_pred CeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCcc
Q psy16243 175 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPH 254 (782)
Q Consensus 175 k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~ 254 (782)
|+++|||..+..|..+ .+.|.. .+.+|+++.|... ...+...++. .
T Consensus 22 k~vlVTGas~gIG~ai----a~~La~---------------~G~~V~~~~r~~~--~~~~~~~~~~-------------~ 67 (272)
T 2nwq_A 22 STLFITGATSGFGEAC----ARRFAE---------------AGWSLVLTGRREE--RLQALAGELS-------------A 67 (272)
T ss_dssp CEEEESSTTTSSHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHT-------------T
T ss_pred cEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEECCHH--HHHHHHHHhh-------------c
Confidence 8999999654444333 233332 2567888888532 1111111111 0
Q ss_pred cccceeEEecCCCCCCCCCCHHhHHHHhcC-------ceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 255 YLSKMVAVTGDCLKPGVGINSEDRQTLVDN-------IHVVFHCAATVRF--------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 255 ~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~-------vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
. .++.++.+|++++ ++++.+++. +|++||+|+.... .+.++..+++|+.|+.++++.+
T Consensus 68 ~-~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~ 140 (272)
T 2nwq_A 68 K-TRVLPLTLDVRDR------AAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLL 140 (272)
T ss_dssp T-SCEEEEECCTTCH------HHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred C-CcEEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 3688999999997 788887765 4999999987432 2445678999999988877765
Q ss_pred H----HccCCc-eEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 320 K----EMKQLK-SFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 320 ~----~~~~~~-~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
. +. +.. ++|++||...+... + ....|+.||...|.+
T Consensus 141 ~~~m~~~-~~g~~IV~isS~~~~~~~---------------------------------~-----~~~~Y~asKaa~~~l 181 (272)
T 2nwq_A 141 LPRLIAH-GAGASIVNLGSVAGKWPY---------------------------------P-----GSHVYGGTKAFVEQF 181 (272)
T ss_dssp HHHHHHH-CTTCEEEEECCGGGTSCC---------------------------------T-----TCHHHHHHHHHHHHH
T ss_pred HHHHHhc-CCCcEEEEeCCchhccCC---------------------------------C-----CCchHHHHHHHHHHH
Confidence 3 33 456 99999998654221 0 016799999999999
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+++.+++||.+.++
T Consensus 182 ~~~la~el~~~gIrvn~v~PG~v~T~ 207 (272)
T 2nwq_A 182 SLNLRCDLQGTGVRVTNLEPGLCESE 207 (272)
T ss_dssp HHHHHTTCTTSCCEEEEEEECSBC--
T ss_pred HHHHHHHhCccCeEEEEEEcCCCcCc
Confidence 8765 24899999999988764
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.88 E-value=5.1e-09 Score=107.83 Aligned_cols=120 Identities=17% Similarity=0.210 Sum_probs=70.4
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc--cCCceE
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM--KQLKSF 328 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~--~~~~~f 328 (782)
++.++.+|++++..--...+..+-+..+|++||+||..... +.++..+++|+.|+.++++.+... ++-.++
T Consensus 49 ~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~i 128 (245)
T 3e9n_A 49 GVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCV 128 (245)
T ss_dssp TEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCcceecccchHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeE
Confidence 57788888876410000000001123689999999975322 335567899999988888875421 012689
Q ss_pred EEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCCCc
Q psy16243 329 VHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGMP 403 (782)
Q Consensus 329 V~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp 403 (782)
|++||...+.... ....|+.||...|.+.+.. ..|+.
T Consensus 129 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~ 170 (245)
T 3e9n_A 129 IYINSGAGNGPHP--------------------------------------GNTIYAASKHALRGLADAFRKEEANNGIR 170 (245)
T ss_dssp EEEC------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEEcCcccccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 9999987654210 0168999999999998765 35899
Q ss_pred EEEecCCeEEec
Q psy16243 404 VAMVRPSIVIAT 415 (782)
Q Consensus 404 ~~IvRp~~v~G~ 415 (782)
+.+++||.+.++
T Consensus 171 v~~v~PG~v~t~ 182 (245)
T 3e9n_A 171 VSTVSPGPTNTP 182 (245)
T ss_dssp EEEEEECCC---
T ss_pred EEEEecCCccCc
Confidence 999999988875
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=98.87 E-value=4.9e-09 Score=113.06 Aligned_cols=115 Identities=10% Similarity=0.124 Sum_probs=88.4
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC-----ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH---
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN-----IHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE--- 321 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~-----vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~--- 321 (782)
.++.++.+|++++ ++++.+++. +|++||+|+.... .+.++..+++|+.|+.++++++..
T Consensus 57 ~~~~~~~~Dv~d~------~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~ 130 (327)
T 1jtv_A 57 GSLETLQLDVRDS------KSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMK 130 (327)
T ss_dssp TSEEEEECCTTCH------HHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCH------HHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4788999999987 888888775 7999999986432 134567899999999999998631
Q ss_pred ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---
Q psy16243 322 MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--- 398 (782)
Q Consensus 322 ~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--- 398 (782)
..+..++|++||...+.... ....|+.||+..|.+.+..
T Consensus 131 ~~~~g~IV~isS~~~~~~~~--------------------------------------~~~~Y~aSK~a~~~~~~~la~e 172 (327)
T 1jtv_A 131 RRGSGRVLVTGSVGGLMGLP--------------------------------------FNDVYCASKFALEGLCESLAVL 172 (327)
T ss_dssp HHTCEEEEEEEEGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEECCcccccCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHH
Confidence 12568999999986543210 1168999999999998766
Q ss_pred --CCCCcEEEecCCeEEec
Q psy16243 399 --GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 --~~glp~~IvRp~~v~G~ 415 (782)
..|+.+.+++||.|..+
T Consensus 173 l~~~gI~v~~v~PG~v~T~ 191 (327)
T 1jtv_A 173 LLPFGVHLSLIECGPVHTA 191 (327)
T ss_dssp HGGGTEEEEEEEECCBCC-
T ss_pred hhhcCcEEEEEEeCcccCh
Confidence 25899999999988754
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=98.87 E-value=6e-09 Score=110.13 Aligned_cols=169 Identities=18% Similarity=0.204 Sum_probs=109.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|... +.+|+++.|... ....+..+++..
T Consensus 21 l~~k~~lVTGas~gIG~ai----a~~L~~~---------------G~~V~~~~r~~~-~~~~~~~~~l~~---------- 70 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAI----AVKLHQT---------------GYRVVIHYHNSA-EAAVSLADELNK---------- 70 (288)
T ss_dssp -CCCEEEETTCSSHHHHHH----HHHHHHH---------------TCEEEEEESSCH-HHHHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHHC---------------CCeEEEEeCCch-HHHHHHHHHHHh----------
Confidence 5679999999654444333 2333221 567888888641 112222222110
Q ss_pred CcccccceeEEecCCCC----CCCCCCHHhHHHHhc-------CceEEEEcCcccC---c------h--------hhHHH
Q psy16243 252 CPHYLSKMVAVTGDCLK----PGVGINSEDRQTLVD-------NIHVVFHCAATVR---F------D--------AHLKV 303 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~----~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~---f------~--------~~~~~ 303 (782)
....++.++.+|+++ + ++++.+++ .+|++||+||... + . +.++.
T Consensus 71 --~~~~~~~~~~~Dv~~~~~~~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (288)
T 2x9g_A 71 --ERSNTAVVCQADLTNSNVLP------ASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAE 142 (288)
T ss_dssp --HSTTCEEEEECCCSCSTTHH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHH
T ss_pred --hcCCceEEEEeecCCccCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHH
Confidence 011368899999998 5 66666654 6899999999643 1 1 23446
Q ss_pred HHHhhHHHHHHHHHHHHHc-c--C------CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcC
Q psy16243 304 AVSINLRATKALLEMAKEM-K--Q------LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITP 374 (782)
Q Consensus 304 ~~~~Nv~gt~~Lle~a~~~-~--~------~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p 374 (782)
.+++|+.|+..+++.+... . + ..++|++||...+....
T Consensus 143 ~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------- 189 (288)
T 2x9g_A 143 LIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCM--------------------------------- 189 (288)
T ss_dssp HHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTTSCCT---------------------------------
T ss_pred HHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCCCC---------------------------------
Confidence 7899999999999887543 1 1 45899999986543210
Q ss_pred CccCCCCccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 375 GIVDYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 375 ~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
....|+.||+..+.+.+.. ..|+.+.+++||.|.++.
T Consensus 190 -----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 231 (288)
T 2x9g_A 190 -----AFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV 231 (288)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence 1167999999888887665 348999999999988753
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.87 E-value=9.5e-09 Score=107.27 Aligned_cols=165 Identities=16% Similarity=0.200 Sum_probs=109.3
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 3 ~~k~~lVTGas~GIG~ai----a~~la~---------------~G~~V~~~~r~~~~--~~~~~~~l~~----------- 50 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGI----ARELGV---------------AGAKILLGARRQAR--IEAIATEIRD----------- 50 (264)
T ss_dssp TTCEEEESSTTSHHHHHH----HHHHHH---------------TTCEEEEEESSHHH--HHHHHHHHHH-----------
T ss_pred CCCEEEEeCCccHHHHHH----HHHHHH---------------CCCEEEEEECCHHH--HHHHHHHHHh-----------
Confidence 468999999644444333 333432 25678888876331 2222222211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+..+++.
T Consensus 51 --~~~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 122 (264)
T 3tfo_A 51 --AGGTALAQVLDVTDR------HSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGA 122 (264)
T ss_dssp --TTCEEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred --cCCcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 123688899999997 77776665 68999999997532 144567899999999988887
Q ss_pred HHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+... .+..++|++||...+.... ....|+.||...+.+.
T Consensus 123 ~~~~m~~~~~g~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~ 164 (264)
T 3tfo_A 123 VLPIMEAQRSGQIINIGSIGALSVVP--------------------------------------TAAVYCATKFAVRAIS 164 (264)
T ss_dssp HHHHHHHHTCEEEEEECCGGGTCCCT--------------------------------------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCeEEEEEcCHHHcccCC--------------------------------------CChhHHHHHHHHHHHH
Confidence 6431 2457999999987543210 1167999999999887
Q ss_pred HHc---CCCCcEEEecCCeEEec
Q psy16243 396 RRG---GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~---~~glp~~IvRp~~v~G~ 415 (782)
+.. ..|+.+..++||.|..+
T Consensus 165 ~~la~e~~gIrvn~v~PG~v~T~ 187 (264)
T 3tfo_A 165 DGLRQESTNIRVTCVNPGVVESE 187 (264)
T ss_dssp HHHHHHCSSEEEEEEEECCC---
T ss_pred HHHHHhCCCCEEEEEecCCCcCc
Confidence 765 24889999999888754
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.85 E-value=2.4e-08 Score=112.35 Aligned_cols=163 Identities=17% Similarity=0.153 Sum_probs=108.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ -+.|.. .+.+|+++.|........+...+
T Consensus 211 l~gk~~LVTGgsgGIG~ai----A~~La~---------------~Ga~Vvl~~r~~~~~~l~~~~~~------------- 258 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATI----AEVFAR---------------DGATVVAIDVDGAAEDLKRVADK------------- 258 (454)
T ss_dssp TTTCEEEESSCSSHHHHHH----HHHHHH---------------TTCEEEEEECGGGHHHHHHHHHH-------------
T ss_pred CCCCEEEEeCCchHHHHHH----HHHHHH---------------CCCEEEEEeCCccHHHHHHHHHH-------------
Confidence 4689999999544333222 233322 15677877776433222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc--------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD--------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~--------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
.++.++.+|++++ ++++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++.
T Consensus 259 -----~~~~~~~~Dvtd~------~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~ 327 (454)
T 3u0b_A 259 -----VGGTALTLDVTAD------DAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLT 327 (454)
T ss_dssp -----HTCEEEECCTTST------THHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred -----cCCeEEEEecCCH------HHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 1456789999998 66666554 38999999997532 1445678999999999999
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+++... .+..+||++||........ ....|+.||...+.
T Consensus 328 ~~~~~~~~~~~~g~iV~iSS~a~~~g~~--------------------------------------g~~~YaasKaal~~ 369 (454)
T 3u0b_A 328 EGLVGNGTIGEGGRVIGLSSMAGIAGNR--------------------------------------GQTNYATTKAGMIG 369 (454)
T ss_dssp HHHHHTTSSCTTCEEEEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHhhhhcCCCEEEEEeChHhCCCCC--------------------------------------CCHHHHHHHHHHHH
Confidence 998754 1457999999986542210 01679999996666
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.... ..|+++..+.||.|..+
T Consensus 370 l~~~la~e~~~~gI~vn~v~PG~v~T~ 396 (454)
T 3u0b_A 370 LAEALAPVLADKGITINAVAPGFIETK 396 (454)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECSBCC-
T ss_pred HHHHHHHHhhhcCcEEEEEEcCcccCh
Confidence 65544 46899999999988754
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.84 E-value=2.3e-08 Score=106.27 Aligned_cols=205 Identities=17% Similarity=0.186 Sum_probs=113.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+.+|..+ .+.|.. .+.+|++..|.... ..+.++++...
T Consensus 10 ~~~k~vlITGas~GIG~~~----a~~L~~---------------~G~~V~~~~r~~~~--~~~~~~~l~~~--------- 59 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEI----CKQLSS---------------NGIMVVLTCRDVTK--GHEAVEKLKNS--------- 59 (311)
T ss_dssp --CCEEEESSCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHTT---------
T ss_pred CCCcEEEEecCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHhc---------
Confidence 4579999999654444333 233322 25688888886432 22223332211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh-------cCceEEEEcCcccCc---------------------------
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV-------DNIHVVFHCAATVRF--------------------------- 297 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~-------~~vdiViH~Aa~v~f--------------------------- 297 (782)
...++.++.+|++++ .+..+.++ ..+|++||+||....
T Consensus 60 ---~~~~~~~~~~Dl~~~-----~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (311)
T 3o26_A 60 ---NHENVVFHQLDVTDP-----IATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEK 131 (311)
T ss_dssp ---TCCSEEEEECCTTSC-----HHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTS
T ss_pred ---CCCceEEEEccCCCc-----HHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcc
Confidence 124789999999986 13343333 368999999997632
Q ss_pred ----------hhhHHHHHHhhHHHHHHHHHHHHHc---cCCceEEEEecceeccCC-C--cccccccC-CCCChhHHHHH
Q psy16243 298 ----------DAHLKVAVSINLRATKALLEMAKEM---KQLKSFVHVSTAYSNCRQ-P--IIEERFYE-PPVNPNHLIQI 360 (782)
Q Consensus 298 ----------~~~~~~~~~~Nv~gt~~Lle~a~~~---~~~~~fV~vST~~v~~~~-~--~i~E~~~~-~~~~~~~~~~~ 360 (782)
.+..+..+++|+.|+..+++.+... .+..++|++||....... . ...+.... .......+-..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (311)
T 3o26_A 132 PEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMV 211 (311)
T ss_dssp HHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHH
T ss_pred cchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHH
Confidence 1234567899999999998886532 245799999998654321 1 01111000 00111111111
Q ss_pred HHhcchhhhhhh--cCCccCCCCccHHHHHHHHHHHHHHc---CCCCcEEEecCCeEEec
Q psy16243 361 TELLNDDMIDKI--TPGIVDYWPNTYALTKQVAEDMVRRG---GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 361 ~~~l~~~~~~~~--~p~~~~~~pn~Y~~SK~~aE~ll~~~---~~glp~~IvRp~~v~G~ 415 (782)
.....++..+.. ..+++ +....|+.||+..+.+.+.. ..++.+..++||.|..+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~ 270 (311)
T 3o26_A 212 VNMLLKDFKENLIETNGWP-SFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTE 270 (311)
T ss_dssp HHHHHHHHHTTCTTTTTCC-SSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSG
T ss_pred HHHHHhhhhccccccccCc-ccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecC
Confidence 111111111110 11111 11257999999999998776 24688888888887654
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.84 E-value=3.2e-08 Score=103.75 Aligned_cols=166 Identities=13% Similarity=0.092 Sum_probs=109.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccch-hh----HHHHHHHhhcccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRAT-KA----LLEMAKEMKQLKFFD 246 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~-~~----~~erl~~~~~~~~f~ 246 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|.... +. ..+...++.
T Consensus 4 l~~k~~lVTGas~GIG~ai----a~~la~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~------ 58 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAI----ALRAAR---------------DGANVAIAAKSAVANPKLPGTIHSAAAAVN------ 58 (274)
T ss_dssp CTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCCSCCTTSCCCHHHHHHHHH------
T ss_pred CCCcEEEEECCCChHHHHH----HHHHHH---------------CCCEEEEEeccchhhhhhHHHHHHHHHHHH------
Confidence 4579999999654444332 233322 25678888886432 11 111111111
Q ss_pred cccccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHH
Q psy16243 247 PMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRAT 312 (782)
Q Consensus 247 ~l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt 312 (782)
....++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|+
T Consensus 59 -------~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~ 125 (274)
T 3e03_A 59 -------AAGGQGLALKCDIREE------DQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGS 125 (274)
T ss_dssp -------HHTSEEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHH
T ss_pred -------hcCCeEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhH
Confidence 1124788999999997 77776665 67999999997432 144567889999999
Q ss_pred HHHHHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHH
Q psy16243 313 KALLEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQ 389 (782)
Q Consensus 313 ~~Lle~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~ 389 (782)
..+.+++... .+..++|++||........ .+ ....|+.||.
T Consensus 126 ~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------------------------------~~-----~~~~Y~asKa 169 (274)
T 3e03_A 126 FVCAQACLPHLLQAPNPHILTLAPPPSLNPAW-------------------------------WG-----AHTGYTLAKM 169 (274)
T ss_dssp HHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH-------------------------------HH-----HCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEEECChHhcCCCC-------------------------------CC-----CCchHHHHHH
Confidence 9999986532 2456899999976542100 00 0157999999
Q ss_pred HHHHHHHHc-----CCCCcEEEecCCe
Q psy16243 390 VAEDMVRRG-----GAGMPVAMVRPSI 411 (782)
Q Consensus 390 ~aE~ll~~~-----~~glp~~IvRp~~ 411 (782)
..+.+.+.. ..|+.+..++||.
T Consensus 170 al~~l~~~la~e~~~~gI~vn~v~PG~ 196 (274)
T 3e03_A 170 GMSLVTLGLAAEFGPQGVAINALWPRT 196 (274)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEECSB
T ss_pred HHHHHHHHHHHHhhhcCEEEEEEECCc
Confidence 999888765 3489999999984
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.81 E-value=1.6e-08 Score=105.69 Aligned_cols=113 Identities=16% Similarity=0.102 Sum_probs=85.2
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc----------CceEEEEcCcccC--------c----hhhHHHHHHhhHHHHHHH
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD----------NIHVVFHCAATVR--------F----DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~----------~vdiViH~Aa~v~--------f----~~~~~~~~~~Nv~gt~~L 315 (782)
++.++.+|++++ ++++++++ .+|++||+|+... + .+.++..+++|+.|+..+
T Consensus 57 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 130 (269)
T 2h7i_A 57 KAPLLELDVQNE------EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASM 130 (269)
T ss_dssp CCCEEECCTTCH------HHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred CceEEEccCCCH------HHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHH
Confidence 678899999987 77777665 7899999999654 1 134556889999999999
Q ss_pred HHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 316 LEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 316 le~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++++... ..-.++|++||....+.+ ....|+.||...+.+
T Consensus 131 ~~~~~~~~~~~g~iv~iss~~~~~~~---------------------------------------~~~~Y~asKaa~~~l 171 (269)
T 2h7i_A 131 AKALLPIMNPGGSIVGMDFDPSRAMP---------------------------------------AYNWMTVAKSALESV 171 (269)
T ss_dssp HHHHGGGEEEEEEEEEEECCCSSCCT---------------------------------------TTHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCeEEEEcCccccccC---------------------------------------chHHHHHHHHHHHHH
Confidence 9998643 112589999987542210 016799999999988
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..++||.+..+
T Consensus 172 ~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (269)
T 2h7i_A 172 NRFVAREAGKYGVRSNLVAAGPIRTL 197 (269)
T ss_dssp HHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred HHHHHHHhcccCcEEEEEecCcccch
Confidence 8765 35899999999887653
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.81 E-value=2.3e-08 Score=105.53 Aligned_cols=165 Identities=15% Similarity=0.184 Sum_probs=110.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchh-----hHHHHHHHhhcccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATK-----ALLEMAKEMKQLKFFD 246 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~-----~~~erl~~~~~~~~f~ 246 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|..... ...+..+++..
T Consensus 7 l~~k~vlVTGas~GIG~ai----a~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~----- 62 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAI----AKRVAA---------------DGANVALVAKSAEPHPKLPGTIYTAAKEIEE----- 62 (285)
T ss_dssp CTTCEEEEESCSSHHHHHH----HHHHHT---------------TTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-----
T ss_pred CCCCEEEEECCCCHHHHHH----HHHHHH---------------CCCEEEEEECChhhhhhhhHHHHHHHHHHHh-----
Confidence 4579999999644433332 333332 256788888874311 12222222211
Q ss_pred cccccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHH
Q psy16243 247 PMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRAT 312 (782)
Q Consensus 247 ~l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt 312 (782)
...++.++.+|++++ ++++++++ .+|++||+||.... .+.++..+++|+.|+
T Consensus 63 --------~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~ 128 (285)
T 3sc4_A 63 --------AGGQALPIVGDIRDG------DAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGT 128 (285)
T ss_dssp --------HTSEEEEEECCTTSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHH
T ss_pred --------cCCcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHH
Confidence 124788999999997 77777665 68999999997532 134567888999999
Q ss_pred HHHHHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHH
Q psy16243 313 KALLEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQ 389 (782)
Q Consensus 313 ~~Lle~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~ 389 (782)
..+++.+... .+..++|++||........ .....|+.||+
T Consensus 129 ~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------------------------------------~~~~~Y~asKa 171 (285)
T 3sc4_A 129 YAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW-------------------------------------LRPTPYMMAKY 171 (285)
T ss_dssp HHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG-------------------------------------SCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEECChhhccCCC-------------------------------------CCCchHHHHHH
Confidence 9999987643 1346899999976432100 01167999999
Q ss_pred HHHHHHHHc-----CCCCcEEEecCCe
Q psy16243 390 VAEDMVRRG-----GAGMPVAMVRPSI 411 (782)
Q Consensus 390 ~aE~ll~~~-----~~glp~~IvRp~~ 411 (782)
..+.+.+.. ..|+.+..++||.
T Consensus 172 al~~~~~~la~e~~~~gI~vn~v~PG~ 198 (285)
T 3sc4_A 172 GMTLCALGIAEELRDAGIASNTLWPRT 198 (285)
T ss_dssp HHHHHHHHHHHHTGGGTCEEEEEECSS
T ss_pred HHHHHHHHHHHHhcccCcEEEEEeCCC
Confidence 999988765 3589999999973
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=2.4e-08 Score=105.68 Aligned_cols=172 Identities=16% Similarity=0.111 Sum_probs=109.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeee-cccchhhHHHHHHHhhcccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSI-NLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~Lv-R~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|+++. |... ...+..+++..
T Consensus 7 l~~k~~lVTGas~GIG~ai----a~~la~---------------~G~~V~~~~~r~~~--~~~~~~~~l~~--------- 56 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSI----AEGLHA---------------EGYAVCLHYHRSAA--EANALSATLNA--------- 56 (291)
T ss_dssp -CCCEEEETTCSSHHHHHH----HHHHHH---------------TTCEEEEEESSCHH--HHHHHHHHHHH---------
T ss_pred CCCCEEEEECCCchHHHHH----HHHHHH---------------CCCeEEEEcCCCHH--HHHHHHHHHhh---------
Confidence 4578999999644333332 233322 256788887 7532 12222222110
Q ss_pred cCcccccceeEEecCCCCCCC-----------CCCHHhHHHHhc-------CceEEEEcCcccCc---------------
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGV-----------GINSEDRQTLVD-------NIHVVFHCAATVRF--------------- 297 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~l-----------Gl~~~~~~~l~~-------~vdiViH~Aa~v~f--------------- 297 (782)
....++.++.+|++++.- +-..++++++++ .+|++||+|+....
T Consensus 57 ---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~ 133 (291)
T 1e7w_A 57 ---RRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCV 133 (291)
T ss_dssp ---HSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC----------
T ss_pred ---hcCCeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCcccccccc
Confidence 011368899999999830 000005555554 68999999996432
Q ss_pred ------hhhHHHHHHhhHHHHHHHHHHHHHc---cC------CceEEEEecceeccCCCcccccccCCCCChhHHHHHHH
Q psy16243 298 ------DAHLKVAVSINLRATKALLEMAKEM---KQ------LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITE 362 (782)
Q Consensus 298 ------~~~~~~~~~~Nv~gt~~Lle~a~~~---~~------~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~ 362 (782)
.+.++..+++|+.|+..+++++... .+ ..++|++||...+...
T Consensus 134 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~---------------------- 191 (291)
T 1e7w_A 134 GDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL---------------------- 191 (291)
T ss_dssp ---HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC----------------------
T ss_pred ccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC----------------------
Confidence 2345578899999999999987532 12 4789999998654321
Q ss_pred hcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 363 LLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 363 ~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+....|+.||...+.+.+.. ..|+.+..++||.|..
T Consensus 192 ----------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T 232 (291)
T 1e7w_A 192 ----------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 232 (291)
T ss_dssp ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred ----------------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccC
Confidence 01168999999999988765 3489999999988754
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.7e-08 Score=104.86 Aligned_cols=164 Identities=20% Similarity=0.194 Sum_probs=107.1
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|..+ .+.|.. .+.+|+++.|.... ..+..+++..
T Consensus 4 ~~k~vlVTGas~gIG~~i----a~~l~~---------------~G~~V~~~~r~~~~--~~~~~~~~~~----------- 51 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGI----ALQLCK---------------AGATVYITGRHLDT--LRVVAQEAQS----------- 51 (260)
T ss_dssp TTCEEEESSTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHH-----------
T ss_pred CCCEEEEeCCCchHHHHH----HHHHHH---------------CCCEEEEEeCCHHH--HHHHHHHHHH-----------
Confidence 478999999544444333 233322 25678888875321 1122222111
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc--------CceEEEEcCc--cc--------Cc----hhhHHHHHHhhHH
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD--------NIHVVFHCAA--TV--------RF----DAHLKVAVSINLR 310 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~--------~vdiViH~Aa--~v--------~f----~~~~~~~~~~Nv~ 310 (782)
...++.++.+|++++ ++++.+++ .+|++||+|+ .. .+ .+.++..+++|+.
T Consensus 52 --~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 123 (260)
T 2qq5_A 52 --LGGQCVPVVCDSSQE------SEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLR 123 (260)
T ss_dssp --HSSEEEEEECCTTSH------HHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTH
T ss_pred --cCCceEEEECCCCCH------HHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcch
Confidence 013688899999987 66655543 4699999994 21 11 1345678899999
Q ss_pred HHHHHHHHHHH-c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHH
Q psy16243 311 ATKALLEMAKE-M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALT 387 (782)
Q Consensus 311 gt~~Lle~a~~-~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~S 387 (782)
|+..+.+.+.. + .+..++|++||...+... ....|+.|
T Consensus 124 ~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------------------------~~~~Y~as 164 (260)
T 2qq5_A 124 GHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM---------------------------------------FNVPYGVG 164 (260)
T ss_dssp HHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC---------------------------------------SSHHHHHH
T ss_pred hHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC---------------------------------------CCCchHHH
Confidence 99888776542 1 245799999998654210 01579999
Q ss_pred HHHHHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 388 KQVAEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 388 K~~aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
|...|.+.+.. ..|+++.+++||.|..+
T Consensus 165 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 197 (260)
T 2qq5_A 165 KAACDKLAADCAHELRRHGVSCVSLWPGIVQTE 197 (260)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTT
T ss_pred HHHHHHHHHHHHHHhccCCeEEEEEecCccccH
Confidence 99999998765 34899999999988754
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.73 E-value=6.8e-08 Score=104.81 Aligned_cols=167 Identities=13% Similarity=0.154 Sum_probs=111.2
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchh-----hHHHHHHHhhccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATK-----ALLEMAKEMKQLKFF 245 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~-----~~~erl~~~~~~~~f 245 (782)
.+.+|+++|||..+.+|..+ .+.|.. .+.+|+++.|..... ...+..+++..
T Consensus 42 ~l~gk~vlVTGas~GIG~ai----a~~La~---------------~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~---- 98 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAI----ALKAAK---------------DGANIVIAAKTAQPHPKLLGTIYTAAEEIEA---- 98 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHH----HHHHHT---------------TTCEEEEEESCCSCCSSSCCCHHHHHHHHHH----
T ss_pred CCCCCEEEEeCCChHHHHHH----HHHHHH---------------CCCEEEEEECChhhhhhhHHHHHHHHHHHHh----
Confidence 46689999999654444333 333332 256788888864321 01112222111
Q ss_pred ccccccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHH
Q psy16243 246 DPMRKRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRA 311 (782)
Q Consensus 246 ~~l~~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~g 311 (782)
.-.++.++.+|++++ ++++++++ .+|++||+|+.... .+.++..+++|+.|
T Consensus 99 ---------~g~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g 163 (346)
T 3kvo_A 99 ---------VGGKALPCIVDVRDE------QQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRG 163 (346)
T ss_dssp ---------TTCEEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHH
T ss_pred ---------cCCeEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHH
Confidence 124788999999998 77777665 68999999997432 24456789999999
Q ss_pred HHHHHHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHH
Q psy16243 312 TKALLEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTK 388 (782)
Q Consensus 312 t~~Lle~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK 388 (782)
+..+++++... .+..++|++||........ . .....|+.||
T Consensus 164 ~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~------~------------------------------~~~~~Y~aSK 207 (346)
T 3kvo_A 164 TYLASKACIPYLKKSKVAHILNISPPLNLNPVW------F------------------------------KQHCAYTIAK 207 (346)
T ss_dssp HHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG------T------------------------------SSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC------C------------------------------CCchHHHHHH
Confidence 99999997432 2457999999986543200 0 0116899999
Q ss_pred HHHHHHHHHc----CCCCcEEEecCCe
Q psy16243 389 QVAEDMVRRG----GAGMPVAMVRPSI 411 (782)
Q Consensus 389 ~~aE~ll~~~----~~glp~~IvRp~~ 411 (782)
...+.+.+.. ..++.+..+.||.
T Consensus 208 aal~~l~~~la~e~~~gIrvn~v~PG~ 234 (346)
T 3kvo_A 208 YGMSMYVLGMAEEFKGEIAVNALWPKT 234 (346)
T ss_dssp HHHHHHHHHHHHHTTTTCEEEEEECSB
T ss_pred HHHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 9998888765 3578888888884
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=6e-08 Score=104.08 Aligned_cols=104 Identities=15% Similarity=0.149 Sum_probs=75.3
Q ss_pred ecCCCCCCCCCCHHhHHHHh-------cCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHH----HccC
Q psy16243 263 TGDCLKPGVGINSEDRQTLV-------DNIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAK----EMKQ 324 (782)
Q Consensus 263 ~gDi~~~~lGl~~~~~~~l~-------~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~----~~~~ 324 (782)
.+|+++. ++.+.++ ..+|++||+||.... .+.++..+++|+.|+.++++++. +. +
T Consensus 70 ~~D~~~~------~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~ 142 (319)
T 1gz6_A 70 VANYDSV------EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-N 142 (319)
T ss_dssp EEECCCG------GGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred EEeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-C
Confidence 4688776 4444433 368999999997532 13456789999999999888863 33 5
Q ss_pred CceEEEEeccee-ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----
Q psy16243 325 LKSFVHVSTAYS-NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG----- 398 (782)
Q Consensus 325 ~~~fV~vST~~v-~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~----- 398 (782)
..++|++||... ++... ...|+.||...+.+.+..
T Consensus 143 ~grIV~vsS~~~~~~~~~---------------------------------------~~~Y~aSK~a~~~~~~~la~el~ 183 (319)
T 1gz6_A 143 YGRIIMTASASGIYGNFG---------------------------------------QANYSAAKLGLLGLANTLVIEGR 183 (319)
T ss_dssp CEEEEEECCHHHHHCCTT---------------------------------------CHHHHHHHHHHHHHHHHHHHHTG
T ss_pred CCEEEEECChhhccCCCC---------------------------------------CHHHHHHHHHHHHHHHHHHHHhc
Confidence 689999999743 33210 167999999999888765
Q ss_pred CCCCcEEEecCCeE
Q psy16243 399 GAGMPVAMVRPSIV 412 (782)
Q Consensus 399 ~~glp~~IvRp~~v 412 (782)
..|+.+.+++||.+
T Consensus 184 ~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 184 KNNIHCNTIAPNAG 197 (319)
T ss_dssp GGTEEEEEEEEECC
T ss_pred ccCEEEEEEeCCCc
Confidence 24899999999865
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=3.6e-08 Score=111.75 Aligned_cols=112 Identities=18% Similarity=0.230 Sum_probs=90.0
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC------ceEEEEcCccc-Cc-------hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN------IHVVFHCAATV-RF-------DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~------vdiViH~Aa~v-~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ +++..+++. +|+|||+|+.. .. .+.++..+++|+.|+.++.+++...
T Consensus 292 ~~v~~~~~Dvtd~------~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~ 365 (496)
T 3mje_A 292 VRVTIAACDAADR------EALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL 365 (496)
T ss_dssp CEEEEEECCTTCH------HHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS
T ss_pred CeEEEEEccCCCH------HHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4789999999998 888888763 79999999976 22 1345678999999999999999876
Q ss_pred cCCceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-CC
Q psy16243 323 KQLKSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-GA 400 (782)
Q Consensus 323 ~~~~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-~~ 400 (782)
...+||++||.+.. |... ...|+.+|...+.+.... ..
T Consensus 366 -~~~~iV~~SS~a~~~g~~g---------------------------------------~~~YaAaKa~ldala~~~~~~ 405 (496)
T 3mje_A 366 -DLDAFVLFSSGAAVWGSGG---------------------------------------QPGYAAANAYLDALAEHRRSL 405 (496)
T ss_dssp -CCSEEEEEEEHHHHTTCTT---------------------------------------CHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCEEEEEeChHhcCCCCC---------------------------------------cHHHHHHHHHHHHHHHHHHhc
Confidence 68899999998543 2211 167999999999998776 56
Q ss_pred CCcEEEecCCeEEe
Q psy16243 401 GMPVAMVRPSIVIA 414 (782)
Q Consensus 401 glp~~IvRp~~v~G 414 (782)
|++++.+.||.+.+
T Consensus 406 Gi~v~sV~pG~w~~ 419 (496)
T 3mje_A 406 GLTASSVAWGTWGE 419 (496)
T ss_dssp TCCCEEEEECEESS
T ss_pred CCeEEEEECCcccC
Confidence 99999999987764
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=1.1e-07 Score=98.34 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=71.9
Q ss_pred CceEEEEcCccc-Cc-------hhhHHHHHHhhHHHHHHHHHHHHHc---cCCceEEEEecceeccCCCcccccccCCCC
Q psy16243 284 NIHVVFHCAATV-RF-------DAHLKVAVSINLRATKALLEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPV 352 (782)
Q Consensus 284 ~vdiViH~Aa~v-~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~ 352 (782)
.+|++||+|+.. .. .+.++..+++|+.|+.++++++... .+..++|++||...+....
T Consensus 72 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 140 (254)
T 1zmt_A 72 QVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK----------- 140 (254)
T ss_dssp CCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT-----------
T ss_pred CCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCC-----------
Confidence 689999999975 21 1345678999999999999886421 2457999999986543210
Q ss_pred ChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEecc
Q psy16243 353 NPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIATN 416 (782)
Q Consensus 353 ~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~~ 416 (782)
....|+.||...+.+.+.. ..|+.+.+++||.|+|+.
T Consensus 141 ---------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~ 182 (254)
T 1zmt_A 141 ---------------------------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSED 182 (254)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence 1168999999999988765 348999999999998764
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=6.7e-08 Score=100.28 Aligned_cols=169 Identities=17% Similarity=0.125 Sum_probs=106.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ .+.|... ...+.+|+++.|... ...+..+++.. .
T Consensus 4 l~~k~~lVTGas~gIG~~i----a~~l~~~------------~~~G~~V~~~~r~~~--~~~~~~~~l~~---------~ 56 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRAL----APQLARL------------LSPGSVMLVSARSES--MLRQLKEELGA---------Q 56 (259)
T ss_dssp CBSEEEEESSCSSHHHHHH----HHHHHTT------------BCTTCEEEEEESCHH--HHHHHHHHHHH---------H
T ss_pred CCCcEEEEeCCCChHHHHH----HHHHHHh------------hcCCCeEEEEeCCHH--HHHHHHHHHHh---------h
Confidence 3478999999644433332 3334320 002567888888532 12222222211 0
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc---------Cce--EEEEcCcccC-----c-----hhhHHHHHHhhHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD---------NIH--VVFHCAATVR-----F-----DAHLKVAVSINLR 310 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~---------~vd--iViH~Aa~v~-----f-----~~~~~~~~~~Nv~ 310 (782)
.+ ..++.++.+|++++ ++++.+++ .+| ++||+||... + .+.++..+++|+.
T Consensus 57 ~~--~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~ 128 (259)
T 1oaa_A 57 QP--DLKVVLAAADLGTE------AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLT 128 (259)
T ss_dssp CT--TSEEEEEECCTTSH------HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTH
T ss_pred CC--CCeEEEEecCCCCH------HHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHH
Confidence 00 13688999999987 66665543 357 9999999642 1 2445678999999
Q ss_pred HHHHHHHHHHHcc-----CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHH
Q psy16243 311 ATKALLEMAKEMK-----QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYA 385 (782)
Q Consensus 311 gt~~Lle~a~~~~-----~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~ 385 (782)
|+.++++++...- +..++|++||...+.... ....|+
T Consensus 129 g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~ 170 (259)
T 1oaa_A 129 SMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK--------------------------------------GWGLYC 170 (259)
T ss_dssp HHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT--------------------------------------TCHHHH
T ss_pred HHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCC--------------------------------------CccHHH
Confidence 9999999986531 235699999987653210 116899
Q ss_pred HHHHHHHHHHHHcC---CCCcEEEecCCeEE
Q psy16243 386 LTKQVAEDMVRRGG---AGMPVAMVRPSIVI 413 (782)
Q Consensus 386 ~SK~~aE~ll~~~~---~glp~~IvRp~~v~ 413 (782)
.||...+.+.+... .++.+..++||.+-
T Consensus 171 asKaa~~~~~~~la~e~~~i~vn~v~PG~v~ 201 (259)
T 1oaa_A 171 AGKAARDMLYQVLAAEEPSVRVLSYAPGPLD 201 (259)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEECCSBS
T ss_pred HHHHHHHHHHHHHHhhCCCceEEEecCCCcC
Confidence 99999999987762 24666777776554
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=3.4e-08 Score=104.04 Aligned_cols=163 Identities=17% Similarity=0.138 Sum_probs=108.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|.. .+.+|++..|... .. +.+.+.
T Consensus 3 l~gk~~lVTGas~GIG~ai----a~~la~---------------~G~~V~~~~r~~~--~~-~~~~~~------------ 48 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRAL----VDRFVA---------------EGARVAVLDKSAE--RL-RELEVA------------ 48 (281)
T ss_dssp TTTCEEEEETCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HH-HHHHHH------------
T ss_pred cCCCEEEEECCCcHHHHHH----HHHHHH---------------CcCEEEEEeCCHH--HH-HHHHHH------------
Confidence 3478999999654444333 233332 2567888877532 11 111111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch------------hhHHHHHHhhHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD------------AHLKVAVSINLRAT 312 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~------------~~~~~~~~~Nv~gt 312 (782)
...++.++.+|++++ ++.+.+++ .+|++||+|+..... +.++..+++|+.|+
T Consensus 49 ---~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~ 119 (281)
T 3zv4_A 49 ---HGGNAVGVVGDVRSL------QDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119 (281)
T ss_dssp ---TBTTEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHH
T ss_pred ---cCCcEEEEEcCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHH
Confidence 124788999999987 67666655 569999999974321 23566888999999
Q ss_pred HHHHHHHHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 313 KALLEMAKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 313 ~~Lle~a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
..+++++... ++-.++|++||...+... +....|+.||..
T Consensus 120 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------------------------------~~~~~Y~asKaa 161 (281)
T 3zv4_A 120 IHAVKACLPALVSSRGSVVFTISNAGFYPN--------------------------------------GGGPLYTATKHA 161 (281)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCGGGTSSS--------------------------------------SSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEEecchhccCC--------------------------------------CCCchhHHHHHH
Confidence 9999987542 112589999998654221 011579999999
Q ss_pred HHHHHHHc----CCCCcEEEecCCeEEec
Q psy16243 391 AEDMVRRG----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 391 aE~ll~~~----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.+.. ..++.+..++||.|..+
T Consensus 162 ~~~l~~~la~e~~~~Irvn~v~PG~v~T~ 190 (281)
T 3zv4_A 162 VVGLVRQMAFELAPHVRVNGVAPGGMNTD 190 (281)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEEECSSCC-
T ss_pred HHHHHHHHHHHhcCCCEEEEEECCcCcCC
Confidence 99988765 34588999999888764
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=3.1e-09 Score=114.57 Aligned_cols=113 Identities=15% Similarity=0.140 Sum_probs=78.7
Q ss_pred HhHHHHhcCceEEEEcCcccCc-hhhHHHHHHhhHHHHHHHHHHHHHccCCc-eEEEEecce-eccCCCcccccccCCCC
Q psy16243 276 EDRQTLVDNIHVVFHCAATVRF-DAHLKVAVSINLRATKALLEMAKEMKQLK-SFVHVSTAY-SNCRQPIIEERFYEPPV 352 (782)
Q Consensus 276 ~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~-~fV~vST~~-v~~~~~~i~E~~~~~~~ 352 (782)
+++.+.++++|+|||+||...- ..+..+.++.|+.+|+++++++++..+.+ +++++|+.. +.. ++.++
T Consensus 72 ~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~---~~~~~------ 142 (327)
T 1y7t_A 72 DDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA---LIAYK------ 142 (327)
T ss_dssp SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH---HHHHH------
T ss_pred cChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH---HHHHH------
Confidence 3456778899999999997643 34566789999999999999999873244 666666432 000 11111
Q ss_pred ChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEecCCeEEeccCC
Q psy16243 353 NPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRPSIVIATNKE 418 (782)
Q Consensus 353 ~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvRp~~v~G~~~~ 418 (782)
..+.. +..+.||.||..+|++...+. .|++.+++|+++|+|++..
T Consensus 143 -------------------~~~~~--~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 143 -------------------NAPGL--NPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp -------------------TCTTS--CGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred -------------------HcCCC--ChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 01011 011679999999999987763 3899999999999998653
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.63 E-value=9.4e-08 Score=109.43 Aligned_cols=112 Identities=20% Similarity=0.148 Sum_probs=87.6
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC------ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHcc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN------IHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEMK 323 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~------vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~~ 323 (782)
.++.++.+|++++ +++..+++. +|+|||+|+.... .+.++..+++|+.|+.++.+++....
T Consensus 315 ~~v~~~~~Dvtd~------~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~ 388 (525)
T 3qp9_A 315 ATATVVTCDLTDA------EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAA 388 (525)
T ss_dssp CEEEEEECCTTSH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEECCCCCH------HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4789999999998 888888765 6999999997532 14466788999999999999987652
Q ss_pred C----CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 324 Q----LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 324 ~----~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
. ..+||++||.+...... ....|+.+|...+.+....
T Consensus 389 ~~~~~~~~iV~~SS~a~~~g~~--------------------------------------g~~~YaaaKa~l~~lA~~~~ 430 (525)
T 3qp9_A 389 AAGGRPPVLVLFSSVAAIWGGA--------------------------------------GQGAYAAGTAFLDALAGQHR 430 (525)
T ss_dssp ----CCCEEEEEEEGGGTTCCT--------------------------------------TCHHHHHHHHHHHHHHTSCC
T ss_pred ccCCCCCEEEEECCHHHcCCCC--------------------------------------CCHHHHHHHHHHHHHHHHHH
Confidence 1 78999999986542210 0167999999999987665
Q ss_pred CCCCcEEEecCCeE
Q psy16243 399 GAGMPVAMVRPSIV 412 (782)
Q Consensus 399 ~~glp~~IvRp~~v 412 (782)
..|++++.+.||.+
T Consensus 431 ~~gi~v~sI~pG~~ 444 (525)
T 3qp9_A 431 ADGPTVTSVAWSPW 444 (525)
T ss_dssp SSCCEEEEEEECCB
T ss_pred hCCCCEEEEECCcc
Confidence 45899999998877
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=6.5e-07 Score=92.76 Aligned_cols=165 Identities=16% Similarity=0.147 Sum_probs=109.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||... |+..+.-+.|..+ +.+|++..|........+.+.+
T Consensus 5 L~gKvalVTGas~----GIG~aia~~la~~---------------Ga~Vv~~~r~~~~~~~~~~~~~------------- 52 (258)
T 4gkb_A 5 LQDKVVIVTGGAS----GIGGAISMRLAEE---------------RAIPVVFARHAPDGAFLDALAQ------------- 52 (258)
T ss_dssp CTTCEEEEETTTS----HHHHHHHHHHHHT---------------TCEEEEEESSCCCHHHHHHHHH-------------
T ss_pred CCCCEEEEeCCCC----HHHHHHHHHHHHc---------------CCEEEEEECCcccHHHHHHHHh-------------
Confidence 4689999999643 3322223444322 5677777776543222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC---c---hhhHHHHHHhhHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR---F---DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~---f---~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
...++.++.+|++++ ++.+++++ .+|+++|+|+... + .+.++..+++|+.|+..+.++
T Consensus 53 ---~~~~~~~~~~Dv~~~------~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~ 123 (258)
T 4gkb_A 53 ---RQPRATYLPVELQDD------AQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHY 123 (258)
T ss_dssp ---HCTTCEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHH
T ss_pred ---cCCCEEEEEeecCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 124788899999987 67666554 5799999999632 1 245667889999999988887
Q ss_pred HHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 319 AKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 319 a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
+... .+--++|.+||.+.....+ ....|+.||...+.+.+
T Consensus 124 ~~p~m~~~~G~IVnisS~~~~~~~~--------------------------------------~~~~Y~asKaav~~ltr 165 (258)
T 4gkb_A 124 CVPHLKATRGAIVNISSKTAVTGQG--------------------------------------NTSGYCASKGAQLALTR 165 (258)
T ss_dssp HHHHHHHHTCEEEEECCTHHHHCCS--------------------------------------SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEeehhhccCCC--------------------------------------CchHHHHHHHHHHHHHH
Confidence 5421 1125899999986542210 11579999999988876
Q ss_pred Hc-----CCCCcEEEecCCeEEec
Q psy16243 397 RG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~ 415 (782)
.. ..|+.+..+.||.|-.|
T Consensus 166 ~lA~ela~~gIrVN~V~PG~i~T~ 189 (258)
T 4gkb_A 166 EWAVALREHGVRVNAVIPAEVMTP 189 (258)
T ss_dssp HHHHHHGGGTCEEEEEEECSBCCS
T ss_pred HHHHHhcccCeEEEEEecCCCCCh
Confidence 65 45899999999988654
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.56 E-value=9.8e-07 Score=91.15 Aligned_cols=166 Identities=13% Similarity=0.103 Sum_probs=110.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|. +.-+.|... +.+|++..|... ...+..+++.+
T Consensus 7 L~gKvalVTGas~GIG~----aia~~la~~---------------Ga~Vvi~~~~~~--~~~~~~~~l~~---------- 55 (255)
T 4g81_D 7 LTGKTALVTGSARGLGF----AYAEGLAAA---------------GARVILNDIRAT--LLAESVDTLTR---------- 55 (255)
T ss_dssp CTTCEEEETTCSSHHHH----HHHHHHHHT---------------TCEEEECCSCHH--HHHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCcHHHH----HHHHHHHHC---------------CCEEEEEECCHH--HHHHHHHHHHh----------
Confidence 45899999996443332 223444322 667877777532 22233333221
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
.-.++..+.+|++++ ++.+++++ .+|+++|+|+.... .+.++..+++|+.|+..+.+
T Consensus 56 ---~g~~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~ 126 (255)
T 4g81_D 56 ---KGYDAHGVAFDVTDE------LAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSR 126 (255)
T ss_dssp ---TTCCEEECCCCTTCH------HHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---cCCcEEEEEeeCCCH------HHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 123688999999998 77766654 46999999997432 24566789999999999888
Q ss_pred HHHH-c---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKE-M---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~-~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+.. + ++--++|.+||.+.....+ ....|+.||.....
T Consensus 127 ~~~p~m~~~~~~G~IVnisS~~~~~~~~--------------------------------------~~~~Y~asKaal~~ 168 (255)
T 4g81_D 127 SAAKRMIARNSGGKIINIGSLTSQAARP--------------------------------------TVAPYTAAKGGIKM 168 (255)
T ss_dssp HHHHHHHHHTCCEEEEEECCGGGTSBCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCCEEEEEeehhhcCCCC--------------------------------------CchhHHHHHHHHHH
Confidence 7532 2 2346899999987543210 11579999998888
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+.+..+.||.|..+
T Consensus 169 ltr~lA~ela~~gIrVN~V~PG~i~T~ 195 (255)
T 4g81_D 169 LTCSMAAEWAQFNIQTNAIGPGYILTD 195 (255)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCG
T ss_pred HHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 87665 45899999999887643
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.52 E-value=8.9e-07 Score=91.40 Aligned_cols=167 Identities=17% Similarity=0.178 Sum_probs=110.6
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
...+|+++|||... |+..+.-+.|.. ++.+|++..|... ...+..+++.+
T Consensus 4 sL~gKvalVTGas~----GIG~aiA~~la~---------------~Ga~Vv~~~~~~~--~~~~~~~~i~~--------- 53 (254)
T 4fn4_A 4 SLKNKVVIVTGAGS----GIGRAIAKKFAL---------------NDSIVVAVELLED--RLNQIVQELRG--------- 53 (254)
T ss_dssp GGTTCEEEEETTTS----HHHHHHHHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHHH---------
T ss_pred CCCCCEEEEeCCCC----HHHHHHHHHHHH---------------cCCEEEEEECCHH--HHHHHHHHHHh---------
Confidence 35689999999643 332222344432 2567877777532 22222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----ch----hhHHHHHHhhHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----FD----AHLKVAVSINLRATKAL 315 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f~----~~~~~~~~~Nv~gt~~L 315 (782)
.-.++.++.+|++++ ++.+++++ .+|+++|+||... +. +.++..+++|+.|+..+
T Consensus 54 ----~g~~~~~~~~Dvt~~------~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~ 123 (254)
T 4fn4_A 54 ----MGKEVLGVKADVSKK------KDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYS 123 (254)
T ss_dssp ----TTCCEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred ----cCCcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence 124788999999998 77776664 4799999998542 22 34667899999999888
Q ss_pred HHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 316 LEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 316 le~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+.+... .+--++|.+||.+..... +....|+.||....
T Consensus 124 ~~~~~p~m~~~~~G~IVnisS~~g~~~~--------------------------------------~~~~~Y~asKaal~ 165 (254)
T 4fn4_A 124 SRAVIPIMLKQGKGVIVNTASIAGIRGG--------------------------------------FAGAPYTVAKHGLI 165 (254)
T ss_dssp HHHHHHHHHHHTCEEEEEECCGGGTCSS--------------------------------------SSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEEechhhcCCC--------------------------------------CCChHHHHHHHHHH
Confidence 8875431 244689999998653211 01157999999888
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+.+..+.||.|-.+
T Consensus 166 ~ltr~lA~ela~~gIrVN~V~PG~i~T~ 193 (254)
T 4fn4_A 166 GLTRSIAAHYGDQGIRAVAVLPGTVKTN 193 (254)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred HHHHHHHHHhhhhCeEEEEEEeCCCCCc
Confidence 877665 45899999999877643
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.6e-06 Score=88.59 Aligned_cols=160 Identities=17% Similarity=0.185 Sum_probs=108.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||... |+..+.-+.|.+. +.+|++..|..... ++
T Consensus 9 f~GK~alVTGas~----GIG~aia~~la~~---------------Ga~Vv~~~~~~~~~------~~------------- 50 (242)
T 4b79_A 9 YAGQQVLVTGGSS----GIGAAIAMQFAEL---------------GAEVVALGLDADGV------HA------------- 50 (242)
T ss_dssp TTTCEEEEETTTS----HHHHHHHHHHHHT---------------TCEEEEEESSTTST------TS-------------
T ss_pred CCCCEEEEeCCCC----HHHHHHHHHHHHC---------------CCEEEEEeCCHHHH------hh-------------
Confidence 4689999999643 4422323444332 56777777753311 00
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc---CceEEEEcCcccCch-----hhHHHHHHhhHHHHHHHHHHHHHc-
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD---NIHVVFHCAATVRFD-----AHLKVAVSINLRATKALLEMAKEM- 322 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~---~vdiViH~Aa~v~f~-----~~~~~~~~~Nv~gt~~Lle~a~~~- 322 (782)
....++..+.+|++++ ++++++++ .+|+++|+|+..... +.++..+++|+.|+..+.+++..+
T Consensus 51 --~~~~~~~~~~~Dv~~~------~~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m 122 (242)
T 4b79_A 51 --PRHPRIRREELDITDS------QRLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLL 122 (242)
T ss_dssp --CCCTTEEEEECCTTCH------HHHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred --hhcCCeEEEEecCCCH------HHHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 1124788899999987 77777766 479999999975322 345678999999999888875432
Q ss_pred -cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---
Q psy16243 323 -KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--- 398 (782)
Q Consensus 323 -~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--- 398 (782)
++--++|.+||.+.....+ ....|+.||.....+.+..
T Consensus 123 ~~~~G~IVnisS~~~~~~~~--------------------------------------~~~~Y~asKaav~~ltr~lA~E 164 (242)
T 4b79_A 123 AQRGGSILNIASMYSTFGSA--------------------------------------DRPAYSASKGAIVQLTRSLACE 164 (242)
T ss_dssp HHHCEEEEEECCGGGTSCCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCeEEEEeeccccCCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHHH
Confidence 1226899999986532110 1157999999988887665
Q ss_pred --CCCCcEEEecCCeEEec
Q psy16243 399 --GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 --~~glp~~IvRp~~v~G~ 415 (782)
..|+.+..+.||.|-.|
T Consensus 165 la~~gIrVNaV~PG~i~T~ 183 (242)
T 4b79_A 165 YAAERIRVNAIAPGWIDTP 183 (242)
T ss_dssp HGGGTEEEEEEEECSBCCC
T ss_pred hhhcCeEEEEEEeCCCCCh
Confidence 45899999999887654
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.50 E-value=2.4e-07 Score=95.25 Aligned_cols=94 Identities=12% Similarity=0.118 Sum_probs=70.7
Q ss_pred CceEEEEcCcccCc----------hhhHHHHHHhhHHHHHHHHHHHHHc---cCCceEEEEecceeccCCCcccccccCC
Q psy16243 284 NIHVVFHCAATVRF----------DAHLKVAVSINLRATKALLEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEP 350 (782)
Q Consensus 284 ~vdiViH~Aa~v~f----------~~~~~~~~~~Nv~gt~~Lle~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~ 350 (782)
.+|++||+|+.... .+.++..+++|+.|+.++++++... .+..++|++||...+....
T Consensus 72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------- 142 (244)
T 1zmo_A 72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLA--------- 142 (244)
T ss_dssp CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT---------
T ss_pred CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCC---------
Confidence 68999999997543 1445678999999999999886421 2467999999987543210
Q ss_pred CCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 351 PVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 351 ~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
....|+.||...+.+.+.. ..|+.+.+++||.|..+
T Consensus 143 -----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 183 (244)
T 1zmo_A 143 -----------------------------YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNP 183 (244)
T ss_dssp -----------------------------TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBT
T ss_pred -----------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCC
Confidence 0157999999999988765 34899999999887653
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.7e-06 Score=90.15 Aligned_cols=163 Identities=17% Similarity=0.209 Sum_probs=109.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||... |+..+.-+.|..+ +.+|++..|... ...+..+++
T Consensus 27 L~gKvalVTGas~----GIG~aiA~~la~~---------------Ga~V~i~~r~~~--~l~~~~~~~------------ 73 (273)
T 4fgs_A 27 LNAKIAVITGATS----GIGLAAAKRFVAE---------------GARVFITGRRKD--VLDAAIAEI------------ 73 (273)
T ss_dssp TTTCEEEEESCSS----HHHHHHHHHHHHT---------------TCEEEEEESCHH--HHHHHHHHH------------
T ss_pred hCCCEEEEeCcCC----HHHHHHHHHHHHC---------------CCEEEEEECCHH--HHHHHHHHc------------
Confidence 5689999999643 4322333444332 677888877532 222222221
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
-.++..+.+|++++ ++.+++++ .+|++||+||.... .+.++..+++|+.|+..+.+
T Consensus 74 ----g~~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~ 143 (273)
T 4fgs_A 74 ----GGGAVGIQADSANL------AELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQ 143 (273)
T ss_dssp ----CTTCEEEECCTTCH------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----CCCeEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHH
Confidence 13677899999998 77776654 46999999987432 24567889999999999988
Q ss_pred HHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 318 MAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 318 ~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
.+... ++-.++|.+||....... | ....|+.||.....+.+
T Consensus 144 ~~~p~m~~~G~IInisS~~~~~~~---------------------------------~-----~~~~Y~asKaav~~ltr 185 (273)
T 4fgs_A 144 KALPLLARGSSVVLTGSTAGSTGT---------------------------------P-----AFSVYAASKAALRSFAR 185 (273)
T ss_dssp HHTTTEEEEEEEEEECCGGGGSCC---------------------------------T-----TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCeEEEEeehhhccCC---------------------------------C-----CchHHHHHHHHHHHHHH
Confidence 86532 223478999887643211 0 11579999999988877
Q ss_pred Hc-----CCCCcEEEecCCeEEec
Q psy16243 397 RG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~ 415 (782)
.. ..|+.+..+.||.|..+
T Consensus 186 ~lA~Ela~~gIrVN~V~PG~i~T~ 209 (273)
T 4fgs_A 186 NWILDLKDRGIRINTLSPGPTETT 209 (273)
T ss_dssp HHHHHTTTSCEEEEEEEECSBCC-
T ss_pred HHHHHhcccCeEEEEEeeCCCCCh
Confidence 65 45899999999877543
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=1.9e-06 Score=88.49 Aligned_cols=159 Identities=16% Similarity=0.182 Sum_probs=105.6
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||....+|. +.-+.|.+. +.+|++..|... ++.+..+
T Consensus 2 nK~vlVTGas~GIG~----aia~~la~~---------------Ga~V~~~~~~~~------~~~~~~~------------ 44 (247)
T 3ged_A 2 NRGVIVTGGGHGIGK----QICLDFLEA---------------GDKVCFIDIDEK------RSADFAK------------ 44 (247)
T ss_dssp CCEEEEESTTSHHHH----HHHHHHHHT---------------TCEEEEEESCHH------HHHHHHT------------
T ss_pred CCEEEEecCCCHHHH----HHHHHHHHC---------------CCEEEEEeCCHH------HHHHHHH------------
Confidence 689999996433332 223444332 667777777532 2222211
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
...++..+.+|++++ ++.+.+++ .+|++||+|+.... .+.++..+++|+.|+..+.+++
T Consensus 45 -~~~~~~~~~~Dv~~~------~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~ 117 (247)
T 3ged_A 45 -ERPNLFYFHGDVADP------LTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLC 117 (247)
T ss_dssp -TCTTEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred -hcCCEEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 123678899999998 77766654 57999999986432 2456678999999999888876
Q ss_pred HHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 320 KEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 320 ~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
... ++--++|.+||.......+ ....|+.||..-+.+.+.
T Consensus 118 ~~~m~~~~G~IInisS~~~~~~~~--------------------------------------~~~~Y~asKaal~~ltk~ 159 (247)
T 3ged_A 118 RDELIKNKGRIINIASTRAFQSEP--------------------------------------DSEAYASAKGGIVALTHA 159 (247)
T ss_dssp HHHHHHTTCEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCcEEEEeecccccCCC--------------------------------------CCHHHHHHHHHHHHHHHH
Confidence 432 1236899999986542210 015799999988887765
Q ss_pred c----CCCCcEEEecCCeEEe
Q psy16243 398 G----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 398 ~----~~glp~~IvRp~~v~G 414 (782)
. .+++.+..+.||.|-.
T Consensus 160 lA~ela~~IrVN~I~PG~i~t 180 (247)
T 3ged_A 160 LAMSLGPDVLVNCIAPGWINV 180 (247)
T ss_dssp HHHHHTTTSEEEEEEECSBCC
T ss_pred HHHHHCCCCEEEEEecCcCCC
Confidence 4 4588888888877643
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.45 E-value=7.9e-06 Score=84.58 Aligned_cols=169 Identities=14% Similarity=0.065 Sum_probs=108.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.- |+..+.-+.|... +.+|++..|..... +.+.+..+.
T Consensus 4 l~gK~alVTGaa~~~--GIG~aiA~~la~~---------------Ga~Vvi~~r~~~~~---~~~~~~~~~--------- 54 (256)
T 4fs3_A 4 LENKTYVIMGIANKR--SIAFGVAKVLDQL---------------GAKLVFTYRKERSR---KELEKLLEQ--------- 54 (256)
T ss_dssp CTTCEEEEECCCSTT--CHHHHHHHHHHHT---------------TCEEEEEESSGGGH---HHHHHHHGG---------
T ss_pred CCCCEEEEECCCCCc--hHHHHHHHHHHHC---------------CCEEEEEECCHHHH---HHHHHHHHh---------
Confidence 458999999964433 3322223444322 67788887864322 222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-----------hhHHHHHHhhHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-----------AHLKVAVSINLRATK 313 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-----------~~~~~~~~~Nv~gt~ 313 (782)
....++.++.+|++++ ++.+.+++ .+|+++|+|+..... +.+...+++|+.++.
T Consensus 55 --~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~ 126 (256)
T 4fs3_A 55 --LNQPEAHLYQIDVQSD------EEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLT 126 (256)
T ss_dssp --GTCSSCEEEECCTTCH------HHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred --cCCCcEEEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 0123688899999987 67666554 579999999864321 223456788999988
Q ss_pred HHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 314 ALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 314 ~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+...+... ++--++|++||....... +....|+.||...+
T Consensus 127 ~~~~~~~~~~~~~G~IVnisS~~~~~~~--------------------------------------~~~~~Y~asKaal~ 168 (256)
T 4fs3_A 127 IVAHEAKKLMPEGGSIVATTYLGGEFAV--------------------------------------QNYNVMGVAKASLE 168 (256)
T ss_dssp HHHHHHHTTCTTCEEEEEEECGGGTSCC--------------------------------------TTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCEEEEEeccccccCc--------------------------------------ccchhhHHHHHHHH
Confidence 888776543 233579999997643211 01167999999988
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+.+..+.||.|-.+
T Consensus 169 ~ltr~lA~Ela~~gIrVN~V~PG~i~T~ 196 (256)
T 4fs3_A 169 ANVKYLALDLGPDNIRVNAISAGPIRTL 196 (256)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCCCSG
T ss_pred HHHHHHHHHhCccCeEEEEEecCCCCCh
Confidence 887665 45899999999877643
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=2.4e-06 Score=90.37 Aligned_cols=96 Identities=15% Similarity=0.091 Sum_probs=69.9
Q ss_pred CceEEEEcCcccC-----c----hhhHHHHHHhhHHHHHHHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCC
Q psy16243 284 NIHVVFHCAATVR-----F----DAHLKVAVSINLRATKALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVN 353 (782)
Q Consensus 284 ~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv~gt~~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~ 353 (782)
.+|++||+||... + .+.++..+++|+.|+.++++++... ..-.++|++||.......
T Consensus 119 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~------------- 185 (297)
T 1d7o_A 119 SIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII------------- 185 (297)
T ss_dssp CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC-------------
T ss_pred CCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccCC-------------
Confidence 6899999998521 1 1345678999999999999998653 112589999998653211
Q ss_pred hhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----C--CCCcEEEecCCeEEecc
Q psy16243 354 PNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG----G--AGMPVAMVRPSIVIATN 416 (782)
Q Consensus 354 ~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~----~--~glp~~IvRp~~v~G~~ 416 (782)
| .+...|+.||...+.+.+.. . .|+.+..++||.|.++.
T Consensus 186 --------------------~----~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~ 230 (297)
T 1d7o_A 186 --------------------P----GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRA 230 (297)
T ss_dssp --------------------T----TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCC
T ss_pred --------------------C----CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccch
Confidence 0 01137999999999887755 2 48999999999998753
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.44 E-value=3.6e-06 Score=86.19 Aligned_cols=163 Identities=14% Similarity=0.147 Sum_probs=107.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||... |+..+.-+.|... +.+|++..|... +...+.+++.
T Consensus 7 L~GKvalVTGas~----GIG~aiA~~la~~---------------Ga~Vvi~~r~~~-~~~~~~~~~~------------ 54 (247)
T 4hp8_A 7 LEGRKALVTGANT----GLGQAIAVGLAAA---------------GAEVVCAARRAP-DETLDIIAKD------------ 54 (247)
T ss_dssp CTTCEEEETTTTS----HHHHHHHHHHHHT---------------TCEEEEEESSCC-HHHHHHHHHT------------
T ss_pred CCCCEEEEeCcCC----HHHHHHHHHHHHc---------------CCEEEEEeCCcH-HHHHHHHHHh------------
Confidence 5689999999643 4422323444332 567777777543 2222222221
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHH-H
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAK-E 321 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~-~ 321 (782)
-.++..+.+|++++ ++.+.+++ .+|+++|+|+.... .+.++..+++|+.|+..+.+.+. .
T Consensus 55 ----g~~~~~~~~Dv~d~------~~v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~ 124 (247)
T 4hp8_A 55 ----GGNASALLIDFADP------LAAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKE 124 (247)
T ss_dssp ----TCCEEEEECCTTST------TTTTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ----CCcEEEEEccCCCH------HHHHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 23678899999987 44444443 47999999997532 24566789999999999888643 2
Q ss_pred c---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 322 M---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 322 ~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
+ ++--++|.+||........ ....|+.||.....+.+..
T Consensus 125 m~~~g~~G~IVnisS~~~~~g~~--------------------------------------~~~~Y~asKaav~~ltr~l 166 (247)
T 4hp8_A 125 LLAKGRSGKVVNIASLLSFQGGI--------------------------------------RVPSYTAAKHGVAGLTKLL 166 (247)
T ss_dssp HHHHTCCEEEEEECCGGGTSCCS--------------------------------------SCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCcEEEEEechhhCCCCC--------------------------------------CChHHHHHHHHHHHHHHHH
Confidence 2 2346899999986532110 0157999999988887665
Q ss_pred -----CCCCcEEEecCCeEEe
Q psy16243 399 -----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G 414 (782)
..|+.+..+.||.|-.
T Consensus 167 A~Ela~~gIrVNaV~PG~i~T 187 (247)
T 4hp8_A 167 ANEWAAKGINVNAIAPGYIET 187 (247)
T ss_dssp HHHHGGGTEEEEEEEECSBCS
T ss_pred HHHHhhcCeEEEEEeeCCCCC
Confidence 4589999999987754
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.39 E-value=1.1e-06 Score=102.74 Aligned_cols=105 Identities=10% Similarity=0.108 Sum_probs=73.1
Q ss_pred ecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH---ccCC
Q psy16243 263 TGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE---MKQL 325 (782)
Q Consensus 263 ~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~---~~~~ 325 (782)
.+|+++. ++.+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++.. ..+.
T Consensus 80 ~~D~~d~------~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~ 153 (613)
T 3oml_A 80 VADYNSV------IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNY 153 (613)
T ss_dssp EECCCCG------GGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEEeCCH------HHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3687776 55666555 47999999997532 145667899999999999998732 1245
Q ss_pred ceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----C
Q psy16243 326 KSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----G 399 (782)
Q Consensus 326 ~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~ 399 (782)
.++|++||.+.. +.. ....|+.||...+.+.+.. .
T Consensus 154 g~IV~isS~a~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~la~e~~~ 194 (613)
T 3oml_A 154 GRIIMTSSNSGIYGNF---------------------------------------GQVNYTAAKMGLIGLANTVAIEGAR 194 (613)
T ss_dssp EEEEEECCHHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CEEEEECCHHHcCCCC---------------------------------------CChHHHHHHHHHHHHHHHHHHHhCc
Confidence 799999997543 211 0157999999999888765 3
Q ss_pred CCCcEEEecCCeE
Q psy16243 400 AGMPVAMVRPSIV 412 (782)
Q Consensus 400 ~glp~~IvRp~~v 412 (782)
.|+.+..+.|+.+
T Consensus 195 ~gI~vn~v~Pg~~ 207 (613)
T 3oml_A 195 NNVLCNVIVPTAA 207 (613)
T ss_dssp GTEEEEEEEEC--
T ss_pred cCeEEEEEECCCC
Confidence 4888888998854
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=4.5e-06 Score=86.60 Aligned_cols=156 Identities=19% Similarity=0.187 Sum_probs=102.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||... |+..+.-+.|... +.+|++..|.+..
T Consensus 9 L~GK~alVTGas~----GIG~aia~~la~~---------------Ga~V~~~~r~~~~---------------------- 47 (261)
T 4h15_A 9 LRGKRALITAGTK----GAGAATVSLFLEL---------------GAQVLTTARARPE---------------------- 47 (261)
T ss_dssp CTTCEEEESCCSS----HHHHHHHHHHHHT---------------TCEEEEEESSCCT----------------------
T ss_pred CCCCEEEEeccCc----HHHHHHHHHHHHc---------------CCEEEEEECCchh----------------------
Confidence 5689999999643 3322223444322 5677777775321
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC-----ch----hhHHHHHHhhHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR-----FD----AHLKVAVSINLRATKAL 315 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~-----f~----~~~~~~~~~Nv~gt~~L 315 (782)
...+...+.+|++++ ++.+.+++ .+|++||+|+... +. +.++..+++|+.|+..+
T Consensus 48 ---~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~ 118 (261)
T 4h15_A 48 ---GLPEELFVEADLTTK------EGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRL 118 (261)
T ss_dssp ---TSCTTTEEECCTTSH------HHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred ---CCCcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence 011334678999987 66665554 4799999998532 21 44567899999999888
Q ss_pred HHHHHH-c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 316 LEMAKE-M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 316 le~a~~-~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+.+.. + .+--++|++||.......+ .....|+.||...+
T Consensus 119 ~~~~~p~m~~~~~G~Iv~isS~~~~~~~~-------------------------------------~~~~~Y~asKaal~ 161 (261)
T 4h15_A 119 DRQLVPDMVARGSGVVVHVTSIQRVLPLP-------------------------------------ESTTAYAAAKAALS 161 (261)
T ss_dssp HHHHHHHHHHHTCEEEEEECCGGGTSCCT-------------------------------------TTCHHHHHHHHHHH
T ss_pred HHhhchhhhhcCCceEEEEEehhhccCCC-------------------------------------CccHHHHHHHHHHH
Confidence 877532 1 2456899999976432100 00157999999988
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
.+.+.. ..|+.+..+.||.|-.
T Consensus 162 ~lt~~lA~Ela~~gIrVN~V~PG~i~T 188 (261)
T 4h15_A 162 TYSKAMSKEVSPKGVRVVRVSPGWIET 188 (261)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred HHHHHHHHHhhhhCeEEEEEeCCCcCC
Confidence 887665 4589999999987764
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.03 E-value=7.6e-06 Score=98.20 Aligned_cols=162 Identities=15% Similarity=0.200 Sum_probs=110.2
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhh-ccceeEEeeceeeeecccceeeeeecccc-hhhHHHHHHHhhcccccccccc
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLV-DNIHVVFHCAATVRFDAHLKVAVSINLRA-TKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~-~~v~iv~hlaa~v~~~~~~~i~~LvR~~~-~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+|+++|||..+..|. +.-+.|. +. ...+|+++.|... .....+.++++..
T Consensus 529 ~~~~~lItGg~~GlG~----aiA~~la~~~--------------Ga~~vvl~~R~~~~~~~~~~~~~~l~~--------- 581 (795)
T 3slk_A 529 AAGTVLVTGGTGALGA----EVARHLVIER--------------GVRNLVLVSRRGPAASGAAELVAQLTA--------- 581 (795)
T ss_dssp TTSEEEEETTTSHHHH----HHHHHHHHTS--------------SCCEEEEEESSGGGSTTHHHHHHHHHH---------
T ss_pred cccceeeccCCCCcHH----HHHHHHHHHc--------------CCcEEEEeccCccchHHHHHHHHHHHh---------
Confidence 4789999995433332 2234443 11 1235777777633 2233344443321
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhcC------ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN------IHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~------vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
.-.++.++.+|++++ ++++.+++. +|+|||+|+.... .+.++..+++|+.|+.++.+
T Consensus 582 ----~G~~v~~~~~Dvsd~------~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~ 651 (795)
T 3slk_A 582 ----YGAEVSLQACDVADR------ETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLE 651 (795)
T ss_dssp ----TTCEEEEEECCTTCH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHH
T ss_pred ----cCCcEEEEEeecCCH------HHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 124789999999998 888887764 5999999997532 14566788999999999999
Q ss_pred HHHHccCCceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 318 MAKEMKQLKSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 318 ~a~~~~~~~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
++. +.+ +||.+||.+.. |.+. ...|+.+|...+.+..
T Consensus 652 ~~~--~~l-~iV~~SS~ag~~g~~g---------------------------------------~~~YaAaka~~~alA~ 689 (795)
T 3slk_A 652 LID--PDV-ALVLFSSVSGVLGSGG---------------------------------------QGNYAAANSFLDALAQ 689 (795)
T ss_dssp HSC--TTS-EEEEEEETHHHHTCSS---------------------------------------CHHHHHHHHHHHHHHH
T ss_pred HHh--hCC-EEEEEccHHhcCCCCC---------------------------------------CHHHHHHHHHHHHHHH
Confidence 873 456 89999998543 3211 1679999998888887
Q ss_pred Hc-CCCCcEEEecCCeEE
Q psy16243 397 RG-GAGMPVAMVRPSIVI 413 (782)
Q Consensus 397 ~~-~~glp~~IvRp~~v~ 413 (782)
+. ..|+++..+-||.+-
T Consensus 690 ~~~~~Gi~v~sI~pG~v~ 707 (795)
T 3slk_A 690 QRQSRGLPTRSLAWGPWA 707 (795)
T ss_dssp HHHHTTCCEEEEEECCCS
T ss_pred HHHHcCCeEEEEECCeEC
Confidence 76 569999888887654
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=3.8e-05 Score=81.88 Aligned_cols=95 Identities=18% Similarity=0.106 Sum_probs=68.1
Q ss_pred CceEEEEcCcccC-----c----hhhHHHHHHhhHHHHHHHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCC
Q psy16243 284 NIHVVFHCAATVR-----F----DAHLKVAVSINLRATKALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVN 353 (782)
Q Consensus 284 ~vdiViH~Aa~v~-----f----~~~~~~~~~~Nv~gt~~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~ 353 (782)
.+|++||+||... + .+.++..+++|+.|+..+++.+... ..-.++|++||.......
T Consensus 120 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~------------- 186 (315)
T 2o2s_A 120 NIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVV------------- 186 (315)
T ss_dssp SEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCC-------------
T ss_pred CCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccC-------------
Confidence 6899999998531 1 1345678899999999999997642 112589999998653211
Q ss_pred hhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----C-CCCcEEEecCCeEEec
Q psy16243 354 PNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----G-AGMPVAMVRPSIVIAT 415 (782)
Q Consensus 354 ~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~-~glp~~IvRp~~v~G~ 415 (782)
+ .+...|+.||...+.+.+.. . .|+.+..++||.|..+
T Consensus 187 --------------------~----~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~ 230 (315)
T 2o2s_A 187 --------------------P----GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSR 230 (315)
T ss_dssp --------------------T----TCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCH
T ss_pred --------------------C----CccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccch
Confidence 0 01136999999988887654 2 5899999999988653
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=2e-05 Score=100.13 Aligned_cols=112 Identities=13% Similarity=0.109 Sum_probs=81.9
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------------CceEEEEcCcccCch----------hhHHHHHHhhHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------------NIHVVFHCAATVRFD----------AHLKVAVSINLRATK 313 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------------~vdiViH~Aa~v~f~----------~~~~~~~~~Nv~gt~ 313 (782)
.++.++.+|++++ ++++.+++ .+|++||+||..... +.++..+++|+.|+.
T Consensus 730 ~~v~~v~~DVsd~------~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~ 803 (1887)
T 2uv8_A 730 STLIVVPFNQGSK------QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMM 803 (1887)
T ss_dssp CEEEEEECCTTCH------HHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHH
T ss_pred CeEEEEEecCCCH------HHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHH
Confidence 3688999999987 67766553 489999999975321 335578899999999
Q ss_pred HHHHHHHHccCC-----ceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHH
Q psy16243 314 ALLEMAKEMKQL-----KSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTK 388 (782)
Q Consensus 314 ~Lle~a~~~~~~-----~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK 388 (782)
.+++.++..+.+ .++|++||...... ....|+.||
T Consensus 804 ~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g----------------------------------------g~~aYaASK 843 (1887)
T 2uv8_A 804 GCVKKQKSARGIETRPAQVILPMSPNHGTFG----------------------------------------GDGMYSESK 843 (1887)
T ss_dssp HHHHHHHHTTTCCSCCEEEEEEECSCTTCSS----------------------------------------CBTTHHHHH
T ss_pred HHHHHHHhhhhhhhCCCCEEEEEcChHhccC----------------------------------------CCchHHHHH
Confidence 999988554332 58999999753211 015799999
Q ss_pred HHHHHH-HHHc----CCCCcEEEecCCeEEe
Q psy16243 389 QVAEDM-VRRG----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 389 ~~aE~l-l~~~----~~glp~~IvRp~~v~G 414 (782)
...+.+ .... ...+.+..+.||.|.+
T Consensus 844 AAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 844 LSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp HHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 999988 3322 2238888999998874
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.9e-05 Score=100.10 Aligned_cols=111 Identities=16% Similarity=0.114 Sum_probs=80.2
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-----------CceEEEEcCcccCch----------hhHHHHHHhhHHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-----------NIHVVFHCAATVRFD----------AHLKVAVSINLRATKAL 315 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-----------~vdiViH~Aa~v~f~----------~~~~~~~~~Nv~gt~~L 315 (782)
.++.++.+|++++ ++++.+++ .+|++||+||..... +.++..+++|+.|+..+
T Consensus 707 ~~v~~v~~DVsd~------esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l 780 (1878)
T 2uv9_A 707 SQLVVVPFNQGSK------QDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGA 780 (1878)
T ss_dssp CEEEEEECCTTCH------HHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHH
T ss_pred CeEEEEEcCCCCH------HHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHH
Confidence 3688999999987 77776653 489999999975321 34567899999999999
Q ss_pred HHHHHHccCC-----ceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 316 LEMAKEMKQL-----KSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 316 le~a~~~~~~-----~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
+++++..+.+ .+||++||...... ....|+.||+.
T Consensus 781 ~~a~~~lp~M~~~~~G~IVnISS~ag~~g----------------------------------------g~~aYaASKAA 820 (1878)
T 2uv9_A 781 IKTQKKERGYETRPAQVILPLSPNHGTFG----------------------------------------NDGLYSESKLA 820 (1878)
T ss_dssp HHHHHHHHTCCSCCEEECCEECSCSSSSS----------------------------------------CCSSHHHHHHH
T ss_pred HHHHHHhHHHHhCCCCEEEEEcchhhccC----------------------------------------CchHHHHHHHH
Confidence 8875433332 58999999753211 01579999999
Q ss_pred HHHHHHHc-----CCCCcEEEecCCeEE
Q psy16243 391 AEDMVRRG-----GAGMPVAMVRPSIVI 413 (782)
Q Consensus 391 aE~ll~~~-----~~glp~~IvRp~~v~ 413 (782)
.+.+.... ..++++..+.||.+-
T Consensus 821 L~aLt~~laAeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 821 LETLFNRWYSESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp HTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence 99886532 234788888888765
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=97.92 E-value=3.5e-05 Score=82.73 Aligned_cols=121 Identities=13% Similarity=0.072 Sum_probs=81.3
Q ss_pred cceeEEecCCCCCCCC-CCHH-------------hHHHHh-------cCceEEEEcCccc-----Cc----hhhHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVG-INSE-------------DRQTLV-------DNIHVVFHCAATV-----RF----DAHLKVAVS 306 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lG-l~~~-------------~~~~l~-------~~vdiViH~Aa~v-----~f----~~~~~~~~~ 306 (782)
..+.++.+|+++.... ++++ ++..++ ..+|++||+||.. .+ .+.++..++
T Consensus 65 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~ 144 (329)
T 3lt0_A 65 NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALS 144 (329)
T ss_dssp CEEEEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHH
T ss_pred cccccccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHH
Confidence 4577888888876221 1111 333333 3579999999852 11 134567899
Q ss_pred hhHHHHHHHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCc-cH
Q psy16243 307 INLRATKALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPN-TY 384 (782)
Q Consensus 307 ~Nv~gt~~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn-~Y 384 (782)
+|+.|+..+.+.+... ..-.++|++||....... | ... .|
T Consensus 145 vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~---------------------------------~-----~~~~~Y 186 (329)
T 3lt0_A 145 KSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV---------------------------------P-----GYGGGM 186 (329)
T ss_dssp HHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC---------------------------------T-----TCTTTH
T ss_pred HHhHHHHHHHHHHHHHHhhCCeEEEEeCccccCCC---------------------------------C-----cchHHH
Confidence 9999999999987642 111589999998643211 0 113 79
Q ss_pred HHHHHHHHHHHHHc-----C-CCCcEEEecCCeEEec
Q psy16243 385 ALTKQVAEDMVRRG-----G-AGMPVAMVRPSIVIAT 415 (782)
Q Consensus 385 ~~SK~~aE~ll~~~-----~-~glp~~IvRp~~v~G~ 415 (782)
+.||+..+.+.+.. . .|+.+..+.||.|..+
T Consensus 187 ~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 187 SSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred HHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence 99999988877654 3 4899999999988654
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.2e-05 Score=98.73 Aligned_cols=112 Identities=13% Similarity=0.115 Sum_probs=80.1
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------------CceEEEEcCcccCc----------hhhHHHHHHhhHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------------NIHVVFHCAATVRF----------DAHLKVAVSINLRATK 313 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------------~vdiViH~Aa~v~f----------~~~~~~~~~~Nv~gt~ 313 (782)
.++.++.+|++++ ++++.+++ .+|++||+||.... .+.++..+++|+.|+.
T Consensus 531 a~V~vV~~DVTD~------esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~ 604 (1688)
T 2pff_A 531 STLIVVPFNQGSK------QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMM 604 (1688)
T ss_dssp CEEEEEECCSSST------THHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHH
T ss_pred CeEEEEEeCCCCH------HHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHH
Confidence 4688999999998 66666543 48999999996422 1345678899999999
Q ss_pred HHHHHHHHccCC-----ceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHH
Q psy16243 314 ALLEMAKEMKQL-----KSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTK 388 (782)
Q Consensus 314 ~Lle~a~~~~~~-----~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK 388 (782)
.++++++..+.+ .++|++||.+.... ....|+.||
T Consensus 605 ~Ltqaa~~lp~M~krggGrIVnISSiAG~~G----------------------------------------g~saYaASK 644 (1688)
T 2pff_A 605 GCVKKQKSARGIETRPAQVILPMSPNHGTFG----------------------------------------GDGMYSESK 644 (1688)
T ss_dssp HHHHHHHHHHTCTTSCEEECCCCCSCTTTSS----------------------------------------CBTTHHHHH
T ss_pred HHHHHHHhChHHHhCCCCEEEEEEChHhccC----------------------------------------CchHHHHHH
Confidence 999988443332 47999998643211 015799999
Q ss_pred HHHHHHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 389 QVAEDMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 389 ~~aE~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+..+.+.... ...+.+..+.||.+.+
T Consensus 645 AAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 645 LSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp HHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 9999984332 2237777788888764
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=97.83 E-value=1.3e-05 Score=85.62 Aligned_cols=95 Identities=19% Similarity=0.109 Sum_probs=57.2
Q ss_pred CceEEEEcCcccC-----ch----hhHHHHHHhhHHHHHHHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCC
Q psy16243 284 NIHVVFHCAATVR-----FD----AHLKVAVSINLRATKALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVN 353 (782)
Q Consensus 284 ~vdiViH~Aa~v~-----f~----~~~~~~~~~Nv~gt~~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~ 353 (782)
.+|++||+||... +. +.++..+++|+.|+..+++.+... ..-.++|++||.......
T Consensus 133 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~------------- 199 (319)
T 2ptg_A 133 QIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI------------- 199 (319)
T ss_dssp CEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------
T ss_pred CCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEecccccccc-------------
Confidence 6899999998531 11 345678899999999999998643 112589999998653210
Q ss_pred hhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----C--CCCcEEEecCCeEEec
Q psy16243 354 PNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG----G--AGMPVAMVRPSIVIAT 415 (782)
Q Consensus 354 ~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~----~--~glp~~IvRp~~v~G~ 415 (782)
| .+...|+.||+..+.+.+.. . .|+.+..++||.|..+
T Consensus 200 --------------------~----~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~ 243 (319)
T 2ptg_A 200 --------------------P----GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSR 243 (319)
T ss_dssp -------------------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC--
T ss_pred --------------------C----ccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccCh
Confidence 0 00136999999888877654 2 4899999999988654
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0016 Score=70.94 Aligned_cols=116 Identities=12% Similarity=0.112 Sum_probs=76.8
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCccc----------------Cc-----------------
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATV----------------RF----------------- 297 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v----------------~f----------------- 297 (782)
++..+.+|++++ ++.+.+++ .+|++||+||.. .+
T Consensus 110 ~a~~i~~Dvtd~------~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~ 183 (405)
T 3zu3_A 110 YAKSINGDAFSD------EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIK 183 (405)
T ss_dssp CEEEEESCTTSH------HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEE
T ss_pred ceEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccc
Confidence 577899999987 67666554 479999999863 11
Q ss_pred --------hhhHHHHHHhhHHHHH-HHHHHHHHccC---CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcc
Q psy16243 298 --------DAHLKVAVSINLRATK-ALLEMAKEMKQ---LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLN 365 (782)
Q Consensus 298 --------~~~~~~~~~~Nv~gt~-~Lle~a~~~~~---~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~ 365 (782)
.+.++..+++|..|+. .++..+....- --++|.+||.......
T Consensus 184 ~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~------------------------- 238 (405)
T 3zu3_A 184 ESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITH------------------------- 238 (405)
T ss_dssp EEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGT-------------------------
T ss_pred cccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcC-------------------------
Confidence 1334566777877765 45555432111 1478999987542110
Q ss_pred hhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CC-CCcEEEecCCeEEec
Q psy16243 366 DDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GA-GMPVAMVRPSIVIAT 415 (782)
Q Consensus 366 ~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~-glp~~IvRp~~v~G~ 415 (782)
+..+...|+.||..-+.+.+.. .. |+.+..+.||.|--+
T Consensus 239 -----------p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~ 283 (405)
T 3zu3_A 239 -----------DIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ 283 (405)
T ss_dssp -----------TTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred -----------CCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence 0111267999999999887765 46 899999999877654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0007 Score=78.65 Aligned_cols=109 Identities=14% Similarity=0.146 Sum_probs=74.0
Q ss_pred ceeEEecCC-CCCCCCCCHHhHHHH---hcCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH-c--c
Q psy16243 258 KMVAVTGDC-LKPGVGINSEDRQTL---VDNIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE-M--K 323 (782)
Q Consensus 258 kv~~i~gDi-~~~~lGl~~~~~~~l---~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~-~--~ 323 (782)
++..+.+|+ ++. +.-++++ +..+|++||+||.... .+.++..+++|+.|+..+.+++.. + .
T Consensus 370 ~~~~~~~Dv~~~~-----~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~ 444 (604)
T 2et6_A 370 EAWPDQHDVAKDS-----EAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK 444 (604)
T ss_dssp EEEEECCCHHHHH-----HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEcChHHHH-----HHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 456677887 432 1222333 3468999999997432 144667899999999998887542 1 2
Q ss_pred CCceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----
Q psy16243 324 QLKSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG---- 398 (782)
Q Consensus 324 ~~~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~---- 398 (782)
+-.++|++||.+.. +.+. ...|+.||.....+.+..
T Consensus 445 ~~G~IVnisS~ag~~~~~~---------------------------------------~~~Y~asKaal~~lt~~la~El 485 (604)
T 2et6_A 445 QFGRIINITSTSGIYGNFG---------------------------------------QANYSSSKAGILGLSKTMAIEG 485 (604)
T ss_dssp TCEEEEEECCHHHHSCCTT---------------------------------------BHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECChhhccCCCC---------------------------------------ChhHHHHHHHHHHHHHHHHHHh
Confidence 34689999997543 2110 157999999888877665
Q ss_pred -CCCCcEEEecCC
Q psy16243 399 -GAGMPVAMVRPS 410 (782)
Q Consensus 399 -~~glp~~IvRp~ 410 (782)
..|+.+..+.||
T Consensus 486 ~~~gIrVn~v~PG 498 (604)
T 2et6_A 486 AKNNIKVNIVAPH 498 (604)
T ss_dssp GGGTEEEEEEEEC
T ss_pred CccCeEEEEEcCC
Confidence 358888888887
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0023 Score=70.56 Aligned_cols=117 Identities=11% Similarity=0.005 Sum_probs=73.5
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCccc----------------Cc----------------
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATV----------------RF---------------- 297 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v----------------~f---------------- 297 (782)
.++..+.+|++++ ++.+.+++ .+|++||+||.. .+
T Consensus 123 ~~~~~~~~Dvtd~------~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~ 196 (418)
T 4eue_A 123 LVAKNFIEDAFSN------ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEI 196 (418)
T ss_dssp CCEEEEESCTTCH------HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEE
T ss_pred CcEEEEEeeCCCH------HHHHHHHHHHHHHcCCCCEEEECCccccccccccccccccccccccccccccccccccccc
Confidence 3678899999987 66665554 479999999863 01
Q ss_pred ---------hhhHHHHHHhhHHHHH-HHHHHHHHcc---CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhc
Q psy16243 298 ---------DAHLKVAVSINLRATK-ALLEMAKEMK---QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELL 364 (782)
Q Consensus 298 ---------~~~~~~~~~~Nv~gt~-~Lle~a~~~~---~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l 364 (782)
.+.++..+++|..+.. .++..+.... +-.++|.+||.......
T Consensus 197 ~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~------------------------ 252 (418)
T 4eue_A 197 TLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY------------------------ 252 (418)
T ss_dssp EEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT------------------------
T ss_pred ccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC------------------------
Confidence 1233445555655544 4455444321 11468888887532110
Q ss_pred chhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----C-CCCcEEEecCCeEEec
Q psy16243 365 NDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----G-AGMPVAMVRPSIVIAT 415 (782)
Q Consensus 365 ~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~-~glp~~IvRp~~v~G~ 415 (782)
+..+...|+.||..-+.+.+.. . .|+.+.++.||.|--+
T Consensus 253 ------------p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~ 297 (418)
T 4eue_A 253 ------------KIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK 297 (418)
T ss_dssp ------------TTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred ------------CccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence 0111168999999988877665 3 5888999999877653
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0021 Score=70.49 Aligned_cols=116 Identities=12% Similarity=0.136 Sum_probs=74.2
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHh--------cCceEEEEcCccc----------------Cc----------------
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLV--------DNIHVVFHCAATV----------------RF---------------- 297 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~--------~~vdiViH~Aa~v----------------~f---------------- 297 (782)
++..+.+|++++ ++.++++ ..+|++||+||.. .+
T Consensus 124 ~a~~i~~Dvtd~------~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~ 197 (422)
T 3s8m_A 124 YSKSINGDAFSD------AARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTI 197 (422)
T ss_dssp CEEEEESCTTSH------HHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEE
T ss_pred cEEEEEecCCCH------HHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccc
Confidence 577899999987 6655544 4579999999851 11
Q ss_pred ---------hhhHHHHHHhhHHHHH-HHHHHHHHcc---CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhc
Q psy16243 298 ---------DAHLKVAVSINLRATK-ALLEMAKEMK---QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELL 364 (782)
Q Consensus 298 ---------~~~~~~~~~~Nv~gt~-~Lle~a~~~~---~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l 364 (782)
.+.++..+++|..|+. .++..+.... +--++|.+||.......
T Consensus 198 ~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~------------------------ 253 (422)
T 3s8m_A 198 IQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITW------------------------ 253 (422)
T ss_dssp EEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH------------------------
T ss_pred cccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC------------------------
Confidence 1233445556655553 5555543321 11478999987542110
Q ss_pred chhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 365 NDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 365 ~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
| ..+...|+.||...+.+.+.. ..|+.+..+.||.|--+
T Consensus 254 ---------p---~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~ 297 (422)
T 3s8m_A 254 ---------P---IYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ 297 (422)
T ss_dssp ---------H---HHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred ---------C---CccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcCh
Confidence 0 001157999999998887665 46899999999887654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0017 Score=75.37 Aligned_cols=89 Identities=16% Similarity=0.206 Sum_probs=64.4
Q ss_pred cCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH-c--cCCceEEEEecceec-cCCCcccccccCCC
Q psy16243 283 DNIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE-M--KQLKSFVHVSTAYSN-CRQPIIEERFYEPP 351 (782)
Q Consensus 283 ~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~-~--~~~~~fV~vST~~v~-~~~~~i~E~~~~~~ 351 (782)
..+|++||+|+.... .+.++..+++|+.|+..+.+++.. + .+-.++|++||.... +.+.
T Consensus 90 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~---------- 159 (604)
T 2et6_A 90 GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG---------- 159 (604)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC----------
Confidence 468999999997432 144667899999999998887532 1 134689999997543 2110
Q ss_pred CChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCCCcEEEecCC
Q psy16243 352 VNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVRPS 410 (782)
Q Consensus 352 ~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~ 410 (782)
...|+.||...+.+.+.. ..|+.+..+.|+
T Consensus 160 -----------------------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 160 -----------------------------QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp -----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred -----------------------------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 157999999988887665 358888889886
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00051 Score=91.78 Aligned_cols=163 Identities=15% Similarity=0.158 Sum_probs=101.5
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccce-eeeeecccch-hhHHHHHHHhhcccccccccc
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLK-VAVSINLRAT-KALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~-i~~LvR~~~~-~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+|+++|||..+..|. +..+.|... +.+ |+++.|.... ....+.++++..
T Consensus 1883 ~~k~~lITGgs~GIG~----aia~~la~~---------------Ga~~vvl~~R~~~~~~~~~~~~~~l~~--------- 1934 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGL----QLAQWLRLR---------------GAQKLVLTSRSGIRTGYQARQVREWRR--------- 1934 (2512)
T ss_dssp TTCEEEEESTTSHHHH----HHHHHHHHT---------------TCCEEEEECSSCCCSHHHHHHHHHHHH---------
T ss_pred CCCEEEEECCCCCHHH----HHHHHHHHC---------------CCCEEEEEeCCCcchHHHHHHHHHHHh---------
Confidence 4799999995443333 223444322 333 6667776432 222223332211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
.-.++.++.+|++++ ++++.+++ .+|+|||+|+..... +.++..+++|+.|+.++.+
T Consensus 1935 ----~g~~v~~~~~Dvsd~------~~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~ 2004 (2512)
T 2vz8_A 1935 ----QGVQVLVSTSNASSL------DGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDR 2004 (2512)
T ss_dssp ----TTCEEEEECCCSSSH------HHHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHH
T ss_pred ----CCCEEEEEecCCCCH------HHHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 113688899999987 66666554 579999999974321 2344567899999999988
Q ss_pred HHHH-ccCCceEEEEecceec-cCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 318 MAKE-MKQLKSFVHVSTAYSN-CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 318 ~a~~-~~~~~~fV~vST~~v~-~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
++.. ++...+||.+||.+.. |.+. ...|+.+|..-+.+.
T Consensus 2005 ~~~~~~~~~g~iV~iSS~ag~~g~~g---------------------------------------~~~Y~aaKaal~~l~ 2045 (2512)
T 2vz8_A 2005 VTREACPELDYFVIFSSVSCGRGNAG---------------------------------------QANYGFANSAMERIC 2045 (2512)
T ss_dssp HHHHHCTTCCEEEEECCHHHHTTCTT---------------------------------------CHHHHHHHHHHHHHH
T ss_pred HHHHhcccCCEEEEecchhhcCCCCC---------------------------------------cHHHHHHHHHHHHHH
Confidence 8764 3456799999998643 2211 157999999999999
Q ss_pred HHc-CCCCcEEEecCCeE
Q psy16243 396 RRG-GAGMPVAMVRPSIV 412 (782)
Q Consensus 396 ~~~-~~glp~~IvRp~~v 412 (782)
+.. ..|+|...+-.+.+
T Consensus 2046 ~~rr~~Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2046 EKRRHDGLPGLAVQWGAI 2063 (2512)
T ss_dssp HHHHHTTSCCCEEEECCB
T ss_pred HHHHHCCCcEEEEEccCc
Confidence 855 45887666555443
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0015 Score=73.79 Aligned_cols=123 Identities=19% Similarity=0.176 Sum_probs=76.1
Q ss_pred ccceeeecCcCccCCCCCCcccc---CceeEEEeccccc--------------cccccccccCCCCCCeEEEEecccccC
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKS---GPISASKNSTASL--------------NSCLPGERLDHYTTESFVHVSTAYSNC 77 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~---~~v~~~i~~~~~~--------------~~~~~~~~~~~~~l~~f~hvsta~~~~ 77 (782)
.++.++.||+..+++|++.+... ..+++|||||+.. ++..+++.+...+.++|||+||+....
T Consensus 140 ~~v~~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~ 219 (478)
T 4dqv_A 140 DRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGA 219 (478)
T ss_dssp TTEEEEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGT
T ss_pred CceEEEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcC
Confidence 67899999999999999775332 2389999999962 233333334444578999999987643
Q ss_pred CCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcC--CCCeEEEeCCCcccc
Q psy16243 78 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRPSIDLG 153 (782)
Q Consensus 78 ~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~--~~~~~~ivRps~~~~ 153 (782)
... . ..+.. | ....-.. ........+++.|..+|...|.+++... .+.+++++||..+.+
T Consensus 220 ~~~--~-~~~~E--~--~~~~p~~---------~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G 281 (478)
T 4dqv_A 220 AIE--P-SAFTE--D--ADIRVIS---------PTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILA 281 (478)
T ss_dssp TSC--T-TTCCS--S--SCHHHHC---------CEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEEC
T ss_pred ccC--C-CCcCC--c--ccccccC---------cccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeC
Confidence 211 1 11110 0 0000000 0011223456779999999999988631 256788999887654
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=95.55 E-value=0.029 Score=59.79 Aligned_cols=57 Identities=14% Similarity=0.118 Sum_probs=46.3
Q ss_pred HhHHHHhcCceEEEEcCcccCc-hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 276 EDRQTLVDNIHVVFHCAATVRF-DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 276 ~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.++.+.++++|+|||+|+...- ..+..+....|+.+++++++.+.+. +.+.+|+++|
T Consensus 68 ~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~S 125 (326)
T 1smk_A 68 QQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLIS 125 (326)
T ss_dssp HHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECC
T ss_pred CCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEEC
Confidence 5777889999999999996532 2334467889999999999999987 6788888876
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=95.22 E-value=0.025 Score=49.74 Aligned_cols=51 Identities=14% Similarity=0.092 Sum_probs=38.7
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
++..+.+|++++ +++.++++++|+|||+++.. + +..+++.|.+. +++.+..
T Consensus 49 ~~~~~~~d~~~~------~~~~~~~~~~d~vi~~~~~~-~--------------~~~~~~~~~~~-g~~~~~~ 99 (118)
T 3ic5_A 49 GVATKQVDAKDE------AGLAKALGGFDAVISAAPFF-L--------------TPIIAKAAKAA-GAHYFDL 99 (118)
T ss_dssp TCEEEECCTTCH------HHHHHHTTTCSEEEECSCGG-G--------------HHHHHHHHHHT-TCEEECC
T ss_pred CCcEEEecCCCH------HHHHHHHcCCCEEEECCCch-h--------------hHHHHHHHHHh-CCCEEEe
Confidence 456788898876 78888999999999998532 1 46788888876 6666654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.015 Score=66.03 Aligned_cols=111 Identities=13% Similarity=-0.046 Sum_probs=67.6
Q ss_pred ccceeeecCcCc-cCCCCCCccccCceeEEEeccccc---------------cccccccccCCCCCCeEEEEecccccCC
Q psy16243 15 EEIFEGEGLSGI-LSLGLNLNQKSGPISASKNSTASL---------------NSCLPGERLDHYTTESFVHVSTAYSNCR 78 (782)
Q Consensus 15 ~~~~~~~gd~~~-~~~~~~~~~~~~~v~~~i~~~~~~---------------~~~~~~~~~~~~~l~~f~hvsta~~~~~ 78 (782)
.++.++.||+.. +.++ ....+++||||||.. ++..+.+.+.. +.++|+|+||.++ +.
T Consensus 211 ~~v~~v~~Dl~d~~~l~-----~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~ 283 (508)
T 4f6l_B 211 SNIEVIVGDFECMDDVV-----LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GT 283 (508)
T ss_dssp TTEEEEEEBTTBCSSCC-----CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TS
T ss_pred CceEEEecCCcccccCC-----CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-cc
Confidence 678999999988 5554 344699999999961 12222222222 5689999999998 42
Q ss_pred CCC--cceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc-CCCCeEEEeCCCcccc
Q psy16243 79 QPI--IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 79 ~~~--ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~-~~~~~~~ivRps~~~~ 153 (782)
... .++..+... + +..-...++.|..+|...|.++... ..+.+++++||..+.+
T Consensus 284 ~~~~~~~~~~~~E~-~--------------------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G 340 (508)
T 4f6l_B 284 YFDIDTEDVTFSEA-D--------------------VYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTS 340 (508)
T ss_dssp EECTTCSCCEECTT-C--------------------SCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEES
T ss_pred CCccCCcCcccccc-c--------------------ccccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceecc
Confidence 110 011111100 0 0000012356889999999998762 2367889999887754
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=95.09 E-value=0.023 Score=58.74 Aligned_cols=101 Identities=13% Similarity=-0.087 Sum_probs=66.4
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccccc-----ccccccccCC--CCCCeEEEEecccccCCCCC--ccee
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN-----SCLPGERLDH--YTTESFVHVSTAYSNCRQPI--IEER 85 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~-----~~~~~~~~~~--~~l~~f~hvsta~~~~~~~~--ide~ 85 (782)
..++++.||+...+ ...+++|||||+... +..+.+.++. .+.++|||+||+........ ++|+
T Consensus 47 ~~~~~~~~D~~d~~--------~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~ 118 (286)
T 3ius_A 47 SGAEPLLWPGEEPS--------LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDET 118 (286)
T ss_dssp TTEEEEESSSSCCC--------CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTT
T ss_pred CCCeEEEecccccc--------cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCC
Confidence 45788999998743 346899999999622 1223333332 56799999999877554321 1111
Q ss_pred ccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCCeEEEeCCCcccc
Q psy16243 86 FYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 86 ~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~~~ 153 (782)
--. .-.+.|..+|...|.++... .+.+++++||..+.+
T Consensus 119 ~~~-----------------------------~p~~~Y~~sK~~~E~~~~~~-~~~~~~ilRp~~v~G 156 (286)
T 3ius_A 119 TPL-----------------------------TPTAARGRWRVMAEQQWQAV-PNLPLHVFRLAGIYG 156 (286)
T ss_dssp SCC-----------------------------CCCSHHHHHHHHHHHHHHHS-TTCCEEEEEECEEEB
T ss_pred CCC-----------------------------CCCCHHHHHHHHHHHHHHhh-cCCCEEEEeccceEC
Confidence 100 00134889999999999876 467889999987765
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=94.95 E-value=0.075 Score=56.16 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=43.5
Q ss_pred HHHhcCceEEEEcCcccCc-hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 279 QTLVDNIHVVFHCAATVRF-DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 279 ~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.+.++++|+|||+|+...- ..+..+....|+.+++++++.+++. + +++|+++|
T Consensus 69 ~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~S 122 (313)
T 1hye_A 69 LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVIT 122 (313)
T ss_dssp GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECS
T ss_pred HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEec
Confidence 4567899999999997542 3445678899999999999999998 5 88888877
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=94.94 E-value=0.024 Score=58.69 Aligned_cols=104 Identities=11% Similarity=-0.134 Sum_probs=66.3
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccc-------------ccccccccccCCCCCCeEEEEecccccCCCCC
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS-------------LNSCLPGERLDHYTTESFVHVSTAYSNCRQPI 81 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~-------------~~~~~~~~~~~~~~l~~f~hvsta~~~~~~~~ 81 (782)
..++++.||+..++. +.. .....+++|||||+. .++..+.+.+...+.++|||+||+...+....
T Consensus 41 ~~~~~~~~Dl~d~~~-~~~-~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~ 118 (286)
T 3gpi_A 41 AGVQTLIADVTRPDT-LAS-IVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVE 118 (286)
T ss_dssp TTCCEEECCTTCGGG-CTT-GGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCS
T ss_pred cCCceEEccCCChHH-HHH-hhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCC
Confidence 467788999988765 322 122239999999985 22334444444446789999999877554221
Q ss_pred --cceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCCeEEEeCCCcccc
Q psy16243 82 --IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 82 --ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~~~ 153 (782)
++|+--. .-.+.|..+|..+|.+ ... .+++++||..+.+
T Consensus 119 ~~~~E~~~~-----------------------------~p~~~Y~~sK~~~E~~-~~~---~~~~ilR~~~v~G 159 (286)
T 3gpi_A 119 EWLDEDTPP-----------------------------IAKDFSGKRMLEAEAL-LAA---YSSTILRFSGIYG 159 (286)
T ss_dssp SEECTTSCC-----------------------------CCCSHHHHHHHHHHHH-GGG---SSEEEEEECEEEB
T ss_pred CCCCCCCCC-----------------------------CCCChhhHHHHHHHHH-Hhc---CCeEEEecccccC
Confidence 1111100 0113488999999999 553 7788999887754
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=94.88 E-value=0.12 Score=69.49 Aligned_cols=115 Identities=17% Similarity=0.184 Sum_probs=68.4
Q ss_pred cCCCeeEeeccccCCCCC-CChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVG-INSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~G-l~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
+.+|+++|||.. .| |..+.-+.|... +.+|++..|..... ..+.++++... +
T Consensus 2134 l~gKvaLVTGAs----~GsIG~AiA~~La~~---------------GA~Vvi~~r~~~~~-~~~~~~~l~~~-----l-- 2186 (3089)
T 3zen_D 2134 XXDEVAVVTGAS----KGSIAASVVGQLLDG---------------GATVIATTSRLDDD-RLAFYKQLYRD-----H-- 2186 (3089)
T ss_dssp CCCCEEEEESCC----TTSHHHHHHHHHHHT---------------TCEEEEEESCCSHH-HHHHHHHHHHH-----H--
T ss_pred CCCCEEEEeCCC----hhHHHHHHHHHHHHC---------------CCEEEEEeCChhhh-hhHHHHHHHHH-----H--
Confidence 779999999963 34 322333444332 66788877764321 11112222110 0
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHh----c-------CceEEEEcCcc----cC------------chhhHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLV----D-------NIHVVFHCAAT----VR------------FDAHLKV 303 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~----~-------~vdiViH~Aa~----v~------------f~~~~~~ 303 (782)
...-.++..+.+|++++ ++.+.++ + .+|++||+|+. .. ++...+.
T Consensus 2187 --~~~G~~~~~v~~Dvtd~------~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~ 2258 (3089)
T 3zen_D 2187 --ARFDATLWVVPANMASY------SDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEM 2258 (3089)
T ss_dssp --CCTTCEEEEEECCTTCH------HHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHH
T ss_pred --hhcCCeEEEEEecCCCH------HHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHH
Confidence 01123678899999997 7776653 2 36999999997 21 1122344
Q ss_pred HHHhhHHHHHHHHHHHHH
Q psy16243 304 AVSINLRATKALLEMAKE 321 (782)
Q Consensus 304 ~~~~Nv~gt~~Lle~a~~ 321 (782)
.+++|+.++..++..+..
T Consensus 2259 ~~~vnl~~~~~l~~~~~~ 2276 (3089)
T 3zen_D 2259 EMKVLLWAVQRLISGLSK 2276 (3089)
T ss_dssp HHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 588999999888877543
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=94.71 E-value=0.012 Score=62.90 Aligned_cols=107 Identities=17% Similarity=-0.005 Sum_probs=67.2
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccc------------------ccccccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS------------------LNSCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~------------------~~~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
..++++.||+..++. + +.....+++|||||+. .++..+.+.+...+.++|||+||+...
T Consensus 79 ~~~~~~~~Dl~d~~~-~--~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy 155 (351)
T 3ruf_A 79 SRFCFIEGDIRDLTT-C--EQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTY 155 (351)
T ss_dssp TTEEEEECCTTCHHH-H--HHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGG
T ss_pred CceEEEEccCCCHHH-H--HHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhc
Confidence 678899999987643 1 1233369999999985 122233444443357899999998775
Q ss_pred CCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCccc
Q psy16243 77 CRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDL 152 (782)
Q Consensus 77 ~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~ 152 (782)
.... .++|+-.. .-.+.|..+|...|.++... ..+.+++++||..+.
T Consensus 156 g~~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~ 206 (351)
T 3ruf_A 156 GDHPALPKVEENIG-----------------------------NPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVF 206 (351)
T ss_dssp TTCCCSSBCTTCCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEE
T ss_pred CCCCCCCCccCCCC-----------------------------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCcee
Confidence 5322 11221100 11234888999999887752 225677899988775
Q ss_pred c
Q psy16243 153 G 153 (782)
Q Consensus 153 ~ 153 (782)
+
T Consensus 207 G 207 (351)
T 3ruf_A 207 G 207 (351)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=94.54 E-value=0.028 Score=62.00 Aligned_cols=112 Identities=13% Similarity=-0.042 Sum_probs=64.9
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEeccccc---------------cccccccccCCCCCCeEEEEecccccCCC
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL---------------NSCLPGERLDHYTTESFVHVSTAYSNCRQ 79 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~---------------~~~~~~~~~~~~~l~~f~hvsta~~~~~~ 79 (782)
.++.++.||+..++. +. ....+++||||||.. ++..+++.+.. +.++|||+||.++ +..
T Consensus 130 ~~v~~v~~Dl~d~~~-l~---~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~ 203 (427)
T 4f6c_A 130 SNIEVIVGDFECMDD-VV---LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTY 203 (427)
T ss_dssp TTEEEEEECC---CC-CC---CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSE
T ss_pred CceEEEeCCCCCccc-CC---CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCC
Confidence 678999999988443 21 444699999999962 12222222223 5689999999998 321
Q ss_pred CC--cceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc-CCCCeEEEeCCCcccc
Q psy16243 80 PI--IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 80 ~~--ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~-~~~~~~~ivRps~~~~ 153 (782)
.. .++..+.. . .+..-....+.|..+|..+|.+++.. ..+.+++++||..+.+
T Consensus 204 ~~~~~~~~~~~E----------------~-----~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G 259 (427)
T 4f6c_A 204 FDIDTEDVTFSE----------------A-----DVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTS 259 (427)
T ss_dssp ECSSCSCCEECT----------------T-----CSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEES
T ss_pred ccCCCCCccccc----------------c-----ccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeec
Confidence 10 01111110 0 00000012356889999999998762 2357888999887754
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=94.35 E-value=0.018 Score=57.21 Aligned_cols=105 Identities=10% Similarity=0.065 Sum_probs=66.8
Q ss_pred cccceeeecCcCc-cCCCCCCccccCceeEEEecccccc----------ccccccccCCCCCCeEEEEecccccCCCCCc
Q psy16243 14 FEEIFEGEGLSGI-LSLGLNLNQKSGPISASKNSTASLN----------SCLPGERLDHYTTESFVHVSTAYSNCRQPII 82 (782)
Q Consensus 14 ~~~~~~~~gd~~~-~~~~~~~~~~~~~v~~~i~~~~~~~----------~~~~~~~~~~~~l~~f~hvsta~~~~~~~~i 82 (782)
+..++++.||+.. ++. +. .....+++|||||+... +..+.+.++..+.++|||+||.+...+...
T Consensus 40 ~~~~~~~~~D~~d~~~~-~~--~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~- 115 (219)
T 3dqp_A 40 YNNVKAVHFDVDWTPEE-MA--KQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKW- 115 (219)
T ss_dssp CTTEEEEECCTTSCHHH-HH--TTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGC-
T ss_pred cCCceEEEecccCCHHH-HH--HHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcc-
Confidence 3678899999987 432 11 23335999999999622 233444444445789999999877543211
Q ss_pred ceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCCeEEEeCCCcccc
Q psy16243 83 EERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 83 de~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~~~ 153 (782)
+| +. .. ..+.|..+|..+|.+++. ..+.++.++||....+
T Consensus 116 ~e-------~~------~~-----------------~~~~Y~~sK~~~e~~~~~-~~~i~~~ilrp~~v~g 155 (219)
T 3dqp_A 116 IG-------AG------FD-----------------ALKDYYIAKHFADLYLTK-ETNLDYTIIQPGALTE 155 (219)
T ss_dssp CS-------HH------HH-----------------HTHHHHHHHHHHHHHHHH-SCCCEEEEEEECSEEC
T ss_pred cc-------cc------cc-----------------cccHHHHHHHHHHHHHHh-ccCCcEEEEeCceEec
Confidence 11 00 00 012388999999999953 3467889999887754
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=93.92 E-value=0.021 Score=60.00 Aligned_cols=107 Identities=13% Similarity=-0.007 Sum_probs=66.1
Q ss_pred cccceeeecCcCccCCCCCCccccCceeEEEecccccc--------------ccccccccCCCCCCeEEEEecccccCCC
Q psy16243 14 FEEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN--------------SCLPGERLDHYTTESFVHVSTAYSNCRQ 79 (782)
Q Consensus 14 ~~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~--------------~~~~~~~~~~~~l~~f~hvsta~~~~~~ 79 (782)
+..++++.||+. ++. +. .....+++|||||+..+ +..+.+.+...+.++|||+||+....+.
T Consensus 41 ~~~~~~~~~Dl~-~~~-~~--~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~ 116 (311)
T 3m2p_A 41 INDYEYRVSDYT-LED-LI--NQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDE 116 (311)
T ss_dssp --CCEEEECCCC-HHH-HH--HHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCG
T ss_pred CCceEEEEcccc-HHH-HH--HhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCC
Confidence 347888999998 543 21 23336999999999622 2233333333457899999998775532
Q ss_pred C--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCcccc
Q psy16243 80 P--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 80 ~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~ 153 (782)
. .++|+-.. .-.+.|..+|...|.++... ..+.+++++||..+.+
T Consensus 117 ~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G 165 (311)
T 3m2p_A 117 TSLPWNEKELP-----------------------------LPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYG 165 (311)
T ss_dssp GGCSBCTTSCC-----------------------------CCSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEEC
T ss_pred CCCCCCCCCCC-----------------------------CCCchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeC
Confidence 1 11211100 01235889999999988762 2367888999887754
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=93.84 E-value=0.071 Score=52.72 Aligned_cols=109 Identities=9% Similarity=-0.118 Sum_probs=66.8
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccc-----------ccccccccccCCCCCCeEEEEecccccCCCCCcc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS-----------LNSCLPGERLDHYTTESFVHVSTAYSNCRQPIIE 83 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~-----------~~~~~~~~~~~~~~l~~f~hvsta~~~~~~~~id 83 (782)
..++++.||+..++. .....+++|||||+. .++..+.+.+...+ ++|||+||+.+-.......
T Consensus 43 ~~~~~~~~D~~d~~~-----~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~ 116 (224)
T 3h2s_A 43 ATVATLVKEPLVLTE-----ADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADH 116 (224)
T ss_dssp TTSEEEECCGGGCCH-----HHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSS
T ss_pred CCceEEecccccccH-----hhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCc
Confidence 578899999998876 344569999999986 23444555565446 9999999876533222100
Q ss_pred eeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHh-cCCCCeEEEeCCCcccc
Q psy16243 84 ERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR-GGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 84 e~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~-~~~~~~~~ivRps~~~~ 153 (782)
...+... . .| ...+.|..+|...|.+... ...+.++.++||....+
T Consensus 117 ~~~~~~~----------------~----~~----~~~~~y~~sK~~~e~~~~~~~~~~i~~~ivrp~~v~g 163 (224)
T 3h2s_A 117 PMILDFP----------------E----SA----ASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFP 163 (224)
T ss_dssp CGGGGCC----------------G----GG----GGSTTHHHHHHHHHHHHHHTTCTTSCEEEEEECSBCC
T ss_pred cccccCC----------------C----CC----ccchhhHHHHHHHHHHHHHHhcCCCcEEEEcCccccC
Confidence 0000000 0 00 0023477888888865322 24467889999988754
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=93.78 E-value=0.046 Score=57.15 Aligned_cols=105 Identities=13% Similarity=-0.115 Sum_probs=64.5
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEeccccc------------------cccccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL------------------NSCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~------------------~~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
..++++.||+..++ +.. ... . ++|||||+.. ++..+.+.+...+.++|||+||+...
T Consensus 43 ~~~~~~~~Dl~d~~--~~~-~~~-~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vy 117 (312)
T 3ko8_A 43 PSAELHVRDLKDYS--WGA-GIK-G-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVY 117 (312)
T ss_dssp TTSEEECCCTTSTT--TTT-TCC-C-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGG
T ss_pred CCceEEECccccHH--HHh-hcC-C-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHh
Confidence 45778999998887 433 222 2 9999999941 12223333333356799999998775
Q ss_pred CCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCccc
Q psy16243 77 CRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDL 152 (782)
Q Consensus 77 ~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~ 152 (782)
+... .++|+--. .-.+.|..+|..+|.+++.. ..+.+++++||..+.
T Consensus 118 g~~~~~~~~e~~~~-----------------------------~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~ 168 (312)
T 3ko8_A 118 GDADVIPTPEEEPY-----------------------------KPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVV 168 (312)
T ss_dssp CSCSSSSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred CCCCCCCCCCCCCC-----------------------------CCCChHHHHHHHHHHHHHHHHHHhCCCEEEEeecccc
Confidence 5322 12221000 01134888999999887652 125678899988775
Q ss_pred c
Q psy16243 153 G 153 (782)
Q Consensus 153 ~ 153 (782)
+
T Consensus 169 g 169 (312)
T 3ko8_A 169 G 169 (312)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=93.66 E-value=0.053 Score=57.77 Aligned_cols=58 Identities=14% Similarity=0.050 Sum_probs=44.8
Q ss_pred HhHHHHhcCceEEEEcCcccCc-hhhHHHHHHhhHHHHHHHHHHHHHccCCc-eEEEEec
Q psy16243 276 EDRQTLVDNIHVVFHCAATVRF-DAHLKVAVSINLRATKALLEMAKEMKQLK-SFVHVST 333 (782)
Q Consensus 276 ~~~~~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~-~fV~vST 333 (782)
.++.+.++++|+|||+|+...- ..+..+....|+.+++++++.+.+..+.+ +||++|.
T Consensus 75 ~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 75 ADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp SSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred cCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 3466778999999999997542 34456788999999999999999873244 7888764
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=93.59 E-value=0.029 Score=60.34 Aligned_cols=106 Identities=10% Similarity=-0.173 Sum_probs=64.8
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccccc----------------ccccccccCCCCCCeEEEEecccccCCC
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN----------------SCLPGERLDHYTTESFVHVSTAYSNCRQ 79 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~----------------~~~~~~~~~~~~l~~f~hvsta~~~~~~ 79 (782)
+..++.||+..++. +.. -....+++|||||+..+ +..+.+.++..+.+ |||+||+...+..
T Consensus 69 ~~~~~~~Dl~d~~~-~~~-~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~ 145 (362)
T 3sxp_A 69 KGEVIAADINNPLD-LRR-LEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNT 145 (362)
T ss_dssp CSEEEECCTTCHHH-HHH-HTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSC
T ss_pred CceEEECCCCCHHH-HHH-hhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCC
Confidence 45788999987653 111 11346999999999522 22233333322445 9999996665432
Q ss_pred C-CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCCeEEEeCCCcccc
Q psy16243 80 P-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 80 ~-~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~~~ 153 (782)
. .++|+-- ..-.+.|..+|..+|.+++......+.+++||..+.+
T Consensus 146 ~~~~~E~~~-----------------------------~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~G 191 (362)
T 3sxp_A 146 KAPNVVGKN-----------------------------ESPENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYG 191 (362)
T ss_dssp CSSBCTTSC-----------------------------CCCSSHHHHHHHHHHHHHHHTTTTSCEEEEEECSEES
T ss_pred CCCCCCCCC-----------------------------CCCCChhHHHHHHHHHHHHHHhccCCEEEEEeCceeC
Confidence 2 1112110 0112359999999999998754447788999877654
|
| >4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus} | Back alignment and structure |
|---|
Probab=93.27 E-value=0.026 Score=48.13 Aligned_cols=55 Identities=16% Similarity=0.067 Sum_probs=46.5
Q ss_pred CCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHH
Q psy16243 78 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 132 (782)
Q Consensus 78 ~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~ 132 (782)
+....+++||+.|.||+.+++++..+++...-.+....++.+|+...+++.+.+.
T Consensus 32 ~~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~ 86 (93)
T 4i4d_A 32 DSVGPHEDFAALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHAT 86 (93)
T ss_dssp SCCCTTCCTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHH
T ss_pred CCCCCCCCHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHH
Confidence 4567799999999999999999999998877677778888999998887766543
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=93.16 E-value=0.036 Score=59.76 Aligned_cols=113 Identities=16% Similarity=0.044 Sum_probs=65.8
Q ss_pred ccceeeecCcC-ccCCCCCCccccCceeEEEecccc------------------ccccccccccCCCCCCeEEEEecccc
Q psy16243 15 EEIFEGEGLSG-ILSLGLNLNQKSGPISASKNSTAS------------------LNSCLPGERLDHYTTESFVHVSTAYS 75 (782)
Q Consensus 15 ~~~~~~~gd~~-~~~~~~~~~~~~~~v~~~i~~~~~------------------~~~~~~~~~~~~~~l~~f~hvsta~~ 75 (782)
..++++.||+. .++. +. .....+++|||||+. .++..+.+.+...+ ++|||+||+..
T Consensus 69 ~~v~~~~~Dl~~d~~~-~~--~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~v 144 (372)
T 3slg_A 69 ERMHFFEGDITINKEW-VE--YHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEV 144 (372)
T ss_dssp TTEEEEECCTTTCHHH-HH--HHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGG
T ss_pred CCeEEEeCccCCCHHH-HH--HHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHH
Confidence 57889999997 4432 11 122258999999995 22233334444334 89999999866
Q ss_pred cCCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcC-CCCeEEEeCCCccc
Q psy16243 76 NCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG-AGMPVAMVRPSIDL 152 (782)
Q Consensus 76 ~~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~-~~~~~~ivRps~~~ 152 (782)
.+... .++|+-.+...++. ..-.+.|..+|...|.+++... .+.+++++||..+.
T Consensus 145 yg~~~~~~~~e~~~~~~~~p~----------------------~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~ 202 (372)
T 3slg_A 145 YGMCADEQFDPDASALTYGPI----------------------NKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWI 202 (372)
T ss_dssp GBSCCCSSBCTTTCCEEECCT----------------------TCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEE
T ss_pred hCCCCCCCCCccccccccCCC----------------------CCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEcccccc
Confidence 54321 11111111000000 0011248899999999988631 16788999998775
Q ss_pred c
Q psy16243 153 G 153 (782)
Q Consensus 153 ~ 153 (782)
+
T Consensus 203 G 203 (372)
T 3slg_A 203 G 203 (372)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=93.01 E-value=0.03 Score=59.40 Aligned_cols=108 Identities=21% Similarity=0.067 Sum_probs=65.4
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccc------------------ccccccccccCCCCCCeEEEEecccccC
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS------------------LNSCLPGERLDHYTTESFVHVSTAYSNC 77 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~------------------~~~~~~~~~~~~~~l~~f~hvsta~~~~ 77 (782)
...++.||+..++. +..--....+++|||+|+. .++..+.+.+...+.++|||+||+...+
T Consensus 56 ~~~~~~~Dl~d~~~-~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 134 (341)
T 3enk_A 56 TPAFHETDVSDERA-LARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYG 134 (341)
T ss_dssp CCEEECCCTTCHHH-HHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBC
T ss_pred CceEEEeecCCHHH-HHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEec
Confidence 67788999887643 1110111258999999985 2233444445544568999999976654
Q ss_pred CCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHh---cCCCCeEEEeCCCccc
Q psy16243 78 RQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR---GGAGMPVAMVRPSIDL 152 (782)
Q Consensus 78 ~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~---~~~~~~~~ivRps~~~ 152 (782)
... .++|+.-. .-.+.|..+|..+|.+++. ...+.+++++||..+.
T Consensus 135 ~~~~~~~~e~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~ 185 (341)
T 3enk_A 135 VPERSPIDETFPL-----------------------------SATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPV 185 (341)
T ss_dssp SCSSSSBCTTSCC-----------------------------BCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEE
T ss_pred CCCCCCCCCCCCC-----------------------------CCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeecccc
Confidence 321 12221100 0113488999999998875 2334778889988765
Q ss_pred c
Q psy16243 153 G 153 (782)
Q Consensus 153 ~ 153 (782)
+
T Consensus 186 G 186 (341)
T 3enk_A 186 G 186 (341)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=92.94 E-value=0.041 Score=58.57 Aligned_cols=106 Identities=19% Similarity=0.038 Sum_probs=65.3
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEeccccc----------------cccccccccCCCCCCeEEEEecccccCC
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL----------------NSCLPGERLDHYTTESFVHVSTAYSNCR 78 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~----------------~~~~~~~~~~~~~l~~f~hvsta~~~~~ 78 (782)
..++.+.||+..++. + ......+++|||||+.. ++..+.+.+...+.++|||+||+.....
T Consensus 56 ~~~~~~~~Dl~d~~~-~--~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~ 132 (347)
T 4id9_A 56 TGGEEVVGSLEDGQA-L--SDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPE 132 (347)
T ss_dssp SCCSEEESCTTCHHH-H--HHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTT
T ss_pred CCccEEecCcCCHHH-H--HHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCC
Confidence 356778888876643 1 12233689999999962 1222333444345789999999877554
Q ss_pred CC----CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCccc
Q psy16243 79 QP----IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDL 152 (782)
Q Consensus 79 ~~----~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~ 152 (782)
.. .++|+-- ....+.|..+|..+|.++... ..+.+++++||..+.
T Consensus 133 ~~~~~~~~~E~~~-----------------------------~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~ 183 (347)
T 4id9_A 133 NRPEFLPVTEDHP-----------------------------LCPNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQ 183 (347)
T ss_dssp TSCSSSSBCTTSC-----------------------------CCCCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEE
T ss_pred CCCCCCCcCCCCC-----------------------------CCCCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEe
Confidence 21 1111100 011235889999999998752 236788999988765
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=92.79 E-value=0.46 Score=49.80 Aligned_cols=53 Identities=11% Similarity=-0.069 Sum_probs=43.0
Q ss_pred HHhcCceEEEEcCcccCc-hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 280 TLVDNIHVVFHCAATVRF-DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 280 ~l~~~vdiViH~Aa~v~f-~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
+.++++|+|||+|+...- ..+..+....|+.+++++++.+++. +.+.+|+++|
T Consensus 66 ~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~S 119 (303)
T 1o6z_A 66 EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTS 119 (303)
T ss_dssp GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECC
T ss_pred HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeC
Confidence 446789999999997542 3445567899999999999999987 6788888876
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=92.69 E-value=0.031 Score=59.57 Aligned_cols=107 Identities=19% Similarity=0.072 Sum_probs=65.5
Q ss_pred ccceeeecCcCccCCCCCCccccC--ceeEEEeccccc------------------cccccccccCCCCCCeEEEEeccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSG--PISASKNSTASL------------------NSCLPGERLDHYTTESFVHVSTAY 74 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~--~v~~~i~~~~~~------------------~~~~~~~~~~~~~l~~f~hvsta~ 74 (782)
..++++.||+..++. +. .... .+++|||||+.. ++..+.+.+...+.++|||+||+.
T Consensus 75 ~~~~~~~~Dl~d~~~-~~--~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~ 151 (346)
T 4egb_A 75 PNYYFVKGEIQNGEL-LE--HVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDE 151 (346)
T ss_dssp TTEEEEECCTTCHHH-HH--HHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGG
T ss_pred CCeEEEEcCCCCHHH-HH--HHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchH
Confidence 467889999977643 11 1222 289999999951 123333344433578999999987
Q ss_pred ccCCCC---CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCC
Q psy16243 75 SNCRQP---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPS 149 (782)
Q Consensus 75 ~~~~~~---~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps 149 (782)
...... .++|+--. .-.+.|..+|..+|.++... ..+.+++++||.
T Consensus 152 vy~~~~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~ 202 (346)
T 4egb_A 152 VYGSLGKTGRFTEETPL-----------------------------APNSPYSSSKASADMIALAYYKTYQLPVIVTRCS 202 (346)
T ss_dssp GGCCCCSSCCBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred HhCCCCcCCCcCCCCCC-----------------------------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeec
Confidence 755431 11221100 01134888999999888762 125678899988
Q ss_pred cccc
Q psy16243 150 IDLG 153 (782)
Q Consensus 150 ~~~~ 153 (782)
.+.+
T Consensus 203 ~v~G 206 (346)
T 4egb_A 203 NNYG 206 (346)
T ss_dssp EEES
T ss_pred ceeC
Confidence 7654
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=92.38 E-value=0.08 Score=55.43 Aligned_cols=106 Identities=12% Similarity=-0.033 Sum_probs=63.9
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEeccccc------------------cccccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL------------------NSCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~------------------~~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
..+..+.||+.. +. +. .....+++|||+|+.. ++..+.+.+...+.++|||+||....
T Consensus 43 ~~~~~~~~Dl~~-~~-~~--~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vy 118 (313)
T 3ehe_A 43 EAARLVKADLAA-DD-IK--DYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVY 118 (313)
T ss_dssp TTEEEECCCTTT-SC-CH--HHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGG
T ss_pred CCcEEEECcCCh-HH-HH--HHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHh
Confidence 346778889875 22 21 2334699999999851 22223344443346899999997665
Q ss_pred CCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCccc
Q psy16243 77 CRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDL 152 (782)
Q Consensus 77 ~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~ 152 (782)
+... .++|+--. .-.+.|..+|..+|.+++.. ..+.+++++||..+.
T Consensus 119 g~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~ 169 (313)
T 3ehe_A 119 GEAKVIPTPEDYPT-----------------------------HPISLYGASKLACEALIESYCHTFDMQAWIYRFANVI 169 (313)
T ss_dssp CSCSSSSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEE
T ss_pred CcCCCCCCCCCCCC-----------------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeecccc
Confidence 4321 11221100 01134888999999888752 236788899998776
Q ss_pred c
Q psy16243 153 G 153 (782)
Q Consensus 153 ~ 153 (782)
+
T Consensus 170 G 170 (313)
T 3ehe_A 170 G 170 (313)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A | Back alignment and structure |
|---|
Probab=92.21 E-value=0.075 Score=44.28 Aligned_cols=54 Identities=19% Similarity=0.244 Sum_probs=46.1
Q ss_pred CCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHH
Q psy16243 79 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 132 (782)
Q Consensus 79 ~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~ 132 (782)
....+.+|++.|+||+.++++...+.+...-.+.+..++.+|+...++.++.+.
T Consensus 33 ~i~~~~~~~~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l~~~ 86 (88)
T 2afd_A 33 DIDMEESFDNYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGEL 86 (88)
T ss_dssp GCCTTSCGGGTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHHHH
T ss_pred HcCCCCCHHHcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence 345688999999999999999999999887777888899999998888777654
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=92.06 E-value=0.15 Score=49.96 Aligned_cols=108 Identities=11% Similarity=-0.060 Sum_probs=63.1
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEeccccc---------cccccccccCCCCCCeEEEEecccccCCCCCccee
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL---------NSCLPGERLDHYTTESFVHVSTAYSNCRQPIIEER 85 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~---------~~~~~~~~~~~~~l~~f~hvsta~~~~~~~~ide~ 85 (782)
..++++.||+..++. .....+++|||||+.. ++..+.+.++..+-.+|+++||+.+-..... ..
T Consensus 42 ~~~~~~~~D~~d~~~-----~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~--~~ 114 (221)
T 3ew7_A 42 KDINILQKDIFDLTL-----SDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDED--GN 114 (221)
T ss_dssp SSSEEEECCGGGCCH-----HHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-----------
T ss_pred CCCeEEeccccChhh-----hhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCC--Cc
Confidence 678999999988876 3445699999999862 2234444454435789999999866432211 00
Q ss_pred ccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHH--HHhcCCCCeEEEeCCCcccc
Q psy16243 86 FYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM--VRRGGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 86 ~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~L--l~~~~~~~~~~ivRps~~~~ 153 (782)
.... + .+. ...+.|..+|...|.+ +.....+.++.++||....+
T Consensus 115 ~~~~--~-------------------~~~---~~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g 160 (221)
T 3ew7_A 115 TLLE--S-------------------KGL---REAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFE 160 (221)
T ss_dssp ----------------------------------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCC
T ss_pred cccc--c-------------------CCC---CCHHHHHHHHHHHHHHHHHHhhccCccEEEEeCcceec
Confidence 0000 0 000 0012366778888776 44314567889999988754
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=91.89 E-value=0.049 Score=58.69 Aligned_cols=92 Identities=15% Similarity=-0.034 Sum_probs=58.6
Q ss_pred ceeeecCcC-ccCCCCCCccccCceeEEEecccccc--------------ccccccccCCCCCC-eEEEEecccccCCCC
Q psy16243 17 IFEGEGLSG-ILSLGLNLNQKSGPISASKNSTASLN--------------SCLPGERLDHYTTE-SFVHVSTAYSNCRQP 80 (782)
Q Consensus 17 ~~~~~gd~~-~~~~~~~~~~~~~~v~~~i~~~~~~~--------------~~~~~~~~~~~~l~-~f~hvsta~~~~~~~ 80 (782)
..++.+|+. .++. +. .....+++|||||+... +..+++.++..+.+ +|+|+||+.+..
T Consensus 26 ~~v~~~d~~~d~~~-l~--~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--- 99 (369)
T 3st7_A 26 HHIFEVHRQTKEEE-LE--SALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--- 99 (369)
T ss_dssp CEEEECCTTCCHHH-HH--HHHHHCSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---
T ss_pred CEEEEECCCCCHHH-HH--HHhccCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---
Confidence 478899984 2211 10 12224899999998621 11233333333344 899999998754
Q ss_pred CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCcccc
Q psy16243 81 IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 81 ~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~ 153 (782)
++.|..+|..+|.+++.. ..+.+++++||..+.+
T Consensus 100 ---------------------------------------~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G 135 (369)
T 3st7_A 100 ---------------------------------------DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFG 135 (369)
T ss_dssp ---------------------------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEEC
T ss_pred ---------------------------------------CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeC
Confidence 345888999999988762 2246788999887654
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=91.82 E-value=0.17 Score=53.00 Aligned_cols=117 Identities=13% Similarity=0.025 Sum_probs=61.5
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccccc-----------------ccccccccCCC-CCCeEEEEecccccC
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN-----------------SCLPGERLDHY-TTESFVHVSTAYSNC 77 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~-----------------~~~~~~~~~~~-~l~~f~hvsta~~~~ 77 (782)
+++++.||+..++. +. .....+++|||+|+..+ +..+.+.+... +.++|||+||+.+..
T Consensus 54 ~~~~~~~Dl~d~~~-~~--~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~ 130 (322)
T 2p4h_X 54 KLHFFNADLSNPDS-FA--AAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVS 130 (322)
T ss_dssp HEEECCCCTTCGGG-GH--HHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTS
T ss_pred ceEEEecCCCCHHH-HH--HHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcc
Confidence 46788899987643 11 22335899999997421 11111222222 468999999987533
Q ss_pred CCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCc--cchhhHHHHHHHHHhc--CCCCeEEEeCCCcccc
Q psy16243 78 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPN--TYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 78 ~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pn--t~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~ 153 (782)
....-...+-+........ .. . ..|. .|..+|.+.|.+.... ..+.++.++||..+.+
T Consensus 131 ~~~~~~~~~~e~~~~~~~~---~~--------~-------~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g 192 (322)
T 2p4h_X 131 FNGKDKDVLDESDWSDVDL---LR--------S-------VKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVG 192 (322)
T ss_dssp CSSSCCSEECTTCCCCHHH---HH--------H-------HCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEES
T ss_pred cCCCCCeecCCccccchhh---hc--------c-------cCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceEC
Confidence 2111011110100000000 00 0 0122 4889999999887642 2357778889887654
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=91.39 E-value=0.073 Score=56.36 Aligned_cols=107 Identities=18% Similarity=0.004 Sum_probs=62.7
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEeccccc------------------cccccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL------------------NSCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~------------------~~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
..++++.||+..++. +. .....+++|||||+.. ++..+.+.+...+.++|||+||....
T Consensus 55 ~~~~~~~~Dl~d~~~-~~--~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vy 131 (337)
T 1r6d_A 55 PRLRFVHGDIRDAGL-LA--RELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVY 131 (337)
T ss_dssp TTEEEEECCTTCHHH-HH--HHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGG
T ss_pred CCeEEEEcCCCCHHH-HH--HHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHh
Confidence 356788999887642 11 1224589999999852 12222233333346899999997654
Q ss_pred CCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCccc
Q psy16243 77 CRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDL 152 (782)
Q Consensus 77 ~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~ 152 (782)
+... .++|+--. .-.+.|..+|..+|.+++.. ..+.+++++||..+.
T Consensus 132 g~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~ 182 (337)
T 1r6d_A 132 GSIDSGSWTESSPL-----------------------------EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNY 182 (337)
T ss_dssp CCCSSSCBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE
T ss_pred CCCCCCCCCCCCCC-----------------------------CCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeE
Confidence 4321 11111000 01134888899999887642 124677888988765
Q ss_pred c
Q psy16243 153 G 153 (782)
Q Consensus 153 ~ 153 (782)
+
T Consensus 183 G 183 (337)
T 1r6d_A 183 G 183 (337)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A | Back alignment and structure |
|---|
Probab=91.36 E-value=0.058 Score=45.76 Aligned_cols=53 Identities=13% Similarity=0.123 Sum_probs=43.2
Q ss_pred CCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHH
Q psy16243 78 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 130 (782)
Q Consensus 78 ~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~ 130 (782)
+....+++||+.|.||+.+++++..+++...-.++...++.+|+...+++.+.
T Consensus 30 ~~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~ 82 (91)
T 1dny_A 30 SGIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVA 82 (91)
T ss_dssp SSCCSSCCTTSSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHH
T ss_pred CCCCCCCCHHHcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHH
Confidence 35667999999999999999999999888766666777888999877765553
|
| >2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A | Back alignment and structure |
|---|
Probab=91.28 E-value=0.054 Score=46.05 Aligned_cols=55 Identities=16% Similarity=0.168 Sum_probs=47.0
Q ss_pred CCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHH
Q psy16243 79 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 133 (782)
Q Consensus 79 ~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~L 133 (782)
....+.+|++.|+||+.+++++..+.+...-.+.+..++.+|+...++.++.+.+
T Consensus 40 ~i~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~l 94 (95)
T 2ju1_A 40 AVRATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAEL 94 (95)
T ss_dssp GCCSSSCHHHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHHHH
T ss_pred hCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHHHHc
Confidence 4566889999999999999999999998877778888899999998888776653
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=91.00 E-value=0.091 Score=55.63 Aligned_cols=109 Identities=17% Similarity=0.088 Sum_probs=62.4
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccccc----------------ccccccccCCCCCCeEEEEecccccCCC
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN----------------SCLPGERLDHYTTESFVHVSTAYSNCRQ 79 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~----------------~~~~~~~~~~~~l~~f~hvsta~~~~~~ 79 (782)
.++++.||+..++. +. .....+++|||||+..+ +..+.+.+...+.++|||+||..+....
T Consensus 57 ~~~~~~~Dl~d~~~-~~--~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~ 133 (342)
T 2x4g_A 57 EPECRVAEMLDHAG-LE--RALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRH 133 (342)
T ss_dssp CCEEEECCTTCHHH-HH--HHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCC
T ss_pred CeEEEEecCCCHHH-HH--HHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcC
Confidence 57788999877643 11 22335899999998522 1222233332356899999999876543
Q ss_pred CC---cceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHh--cCCCCeEEEeCCCcccc
Q psy16243 80 PI---IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR--GGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 80 ~~---ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~--~~~~~~~~ivRps~~~~ 153 (782)
.. ++|+-.. .|. ....+.|..+|..+|.+++. .. +.+++++||..+.+
T Consensus 134 ~~~~~~~E~~~~-----------------------~p~--~~~~~~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g 186 (342)
T 2x4g_A 134 PQGLPGHEGLFY-----------------------DSL--PSGKSSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLG 186 (342)
T ss_dssp TTSSCBCTTCCC-----------------------SSC--CTTSCHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEEC
T ss_pred CCCCCCCCCCCC-----------------------Ccc--ccccChHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceEC
Confidence 21 1111100 000 00134588999999998876 23 67888999887654
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=90.99 E-value=0.11 Score=51.61 Aligned_cols=108 Identities=13% Similarity=-0.009 Sum_probs=64.6
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEeccccc------------cccccccccCCCCCCeEEEEecccccCCCCCc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL------------NSCLPGERLDHYTTESFVHVSTAYSNCRQPII 82 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~------------~~~~~~~~~~~~~l~~f~hvsta~~~~~~~~i 82 (782)
..+.++.||+..++. + ......+++|||||+.. ++..+.+.+...+.++|||+||+.+.....
T Consensus 46 ~~~~~~~~Dl~d~~~-~--~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~-- 120 (227)
T 3dhn_A 46 EHLKVKKADVSSLDE-V--CEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAP-- 120 (227)
T ss_dssp TTEEEECCCTTCHHH-H--HHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEET--
T ss_pred CceEEEEecCCCHHH-H--HHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCC--
Confidence 567889999876543 1 12333589999999862 222333344434578999999986543221
Q ss_pred ceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCcccc
Q psy16243 83 EERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 83 de~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~ 153 (782)
+....+... .-.+.|..+|...|.+++.- ..+.+++++||..+.+
T Consensus 121 ~~~~~~~~~--------------------------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g 167 (227)
T 3dhn_A 121 GLRLMDSGE--------------------------VPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMR 167 (227)
T ss_dssp TEEGGGTTC--------------------------SCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEE
T ss_pred CCccccCCc--------------------------chHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccC
Confidence 111000000 00123888999999766542 4467889999998754
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=90.85 E-value=0.24 Score=49.47 Aligned_cols=94 Identities=12% Similarity=-0.054 Sum_probs=62.3
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEeccccc---------------cccccccccCCCCCCeEEEEecccccCCC
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL---------------NSCLPGERLDHYTTESFVHVSTAYSNCRQ 79 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~---------------~~~~~~~~~~~~~l~~f~hvsta~~~~~~ 79 (782)
..+.++.||+..++. +. .....+++|||||+.. ++..+.+.+...+.++||++||.....+
T Consensus 63 ~~~~~~~~D~~d~~~-~~--~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~- 138 (242)
T 2bka_A 63 KNVNQEVVDFEKLDD-YA--SAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS- 138 (242)
T ss_dssp GGCEEEECCGGGGGG-GG--GGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-
T ss_pred CCceEEecCcCCHHH-HH--HHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-
Confidence 357788999987643 21 2333589999999862 2333444444335689999999876421
Q ss_pred CCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCC-eEEEeCCCcccc
Q psy16243 80 PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGM-PVAMVRPSIDLG 153 (782)
Q Consensus 80 ~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~-~~~ivRps~~~~ 153 (782)
.++.|..+|..+|.+++.. .. .+.++||..+.+
T Consensus 139 ---------------------------------------~~~~Y~~sK~~~e~~~~~~--~~~~~~~vrpg~v~~ 172 (242)
T 2bka_A 139 ---------------------------------------SNFLYLQVKGEVEAKVEEL--KFDRYSVFRPGVLLC 172 (242)
T ss_dssp ---------------------------------------CSSHHHHHHHHHHHHHHTT--CCSEEEEEECCEEEC
T ss_pred ---------------------------------------CcchHHHHHHHHHHHHHhc--CCCCeEEEcCceecC
Confidence 0123788899999998764 34 578889887654
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=90.76 E-value=0.12 Score=54.29 Aligned_cols=106 Identities=21% Similarity=0.095 Sum_probs=64.1
Q ss_pred cceeeecCcCccCCCCCCccccC--ceeEEEeccccc------------------cccccccccCCCCCCeEEEEecccc
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSG--PISASKNSTASL------------------NSCLPGERLDHYTTESFVHVSTAYS 75 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~--~v~~~i~~~~~~------------------~~~~~~~~~~~~~l~~f~hvsta~~ 75 (782)
.++++.||+..++. +. .... .+++|||||+.. ++..+.+.+...+.++|||+||+..
T Consensus 45 ~~~~~~~D~~~~~~-~~--~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~ 121 (330)
T 2c20_A 45 GAKFYNGDLRDKAF-LR--DVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAAT 121 (330)
T ss_dssp TSEEEECCTTCHHH-HH--HHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGG
T ss_pred CcEEEECCCCCHHH-HH--HHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCcee
Confidence 56788899876643 11 1122 589999999852 2222333333335789999999877
Q ss_pred cCCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCcc
Q psy16243 76 NCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSID 151 (782)
Q Consensus 76 ~~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~ 151 (782)
..... .++|+- |. .-.+.|..+|..+|.++... ..+.+++++||..+
T Consensus 122 ~~~~~~~~~~E~~--------------------------~~---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v 172 (330)
T 2c20_A 122 YGEVDVDLITEET--------------------------MT---NPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNV 172 (330)
T ss_dssp GCSCSSSSBCTTS--------------------------CC---CCSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEE
T ss_pred eCCCCCCCCCcCC--------------------------CC---CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcc
Confidence 54321 111110 00 01145889999999988752 23577889998876
Q ss_pred cc
Q psy16243 152 LG 153 (782)
Q Consensus 152 ~~ 153 (782)
.+
T Consensus 173 ~G 174 (330)
T 2c20_A 173 AG 174 (330)
T ss_dssp EC
T ss_pred cC
Confidence 54
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.13 E-value=0.049 Score=56.75 Aligned_cols=110 Identities=10% Similarity=-0.062 Sum_probs=64.0
Q ss_pred ccceeeecCcCccCCCCCCccccC--ceeEEEecccccc-------------------ccccccccCCCCCCeEEEEecc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSG--PISASKNSTASLN-------------------SCLPGERLDHYTTESFVHVSTA 73 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~--~v~~~i~~~~~~~-------------------~~~~~~~~~~~~l~~f~hvsta 73 (782)
..++.+.||+..++. +. .... .+++|||||+..+ +..+.+.+...+.++|||+||+
T Consensus 38 ~~~~~~~~D~~d~~~-~~--~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~ 114 (319)
T 4b8w_A 38 VFVSSKDADLTDTAQ-TR--ALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLST 114 (319)
T ss_dssp EECCTTTCCTTSHHH-HH--HHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCG
T ss_pred cccCceecccCCHHH-HH--HHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcch
Confidence 445667889876643 11 1122 2899999999622 1223333333357899999999
Q ss_pred cccCCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCc--cchhhHHHHHHHHHh--cCCCCeEEEeC
Q psy16243 74 YSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPN--TYALTKQVAEDMVRR--GGAGMPVAMVR 147 (782)
Q Consensus 74 ~~~~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pn--t~~l~k~L~E~Ll~~--~~~~~~~~ivR 147 (782)
....+.. .++|+-. ......|. .|..+|...|.++.. ...+.+++++|
T Consensus 115 ~vyg~~~~~~~~E~~~--------------------------~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR 168 (319)
T 4b8w_A 115 CIFPDKTTYPIDETMI--------------------------HNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVI 168 (319)
T ss_dssp GGSCSSCCSSBCGGGG--------------------------GBSCCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred hhcCCCCCCCcccccc--------------------------ccCCCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEe
Confidence 7654321 1111110 00011232 388889999998765 22357888999
Q ss_pred CCcccc
Q psy16243 148 PSIDLG 153 (782)
Q Consensus 148 ps~~~~ 153 (782)
|..+.+
T Consensus 169 p~~v~G 174 (319)
T 4b8w_A 169 PTNVFG 174 (319)
T ss_dssp ECEEEC
T ss_pred eccccC
Confidence 887754
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=90.06 E-value=0.095 Score=55.90 Aligned_cols=107 Identities=16% Similarity=-0.050 Sum_probs=64.2
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccccc------------------ccccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN------------------SCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~------------------~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
.++.++.||+..++. +. .....+++|||||+... +..+.+.+...+.++|||+||+...
T Consensus 81 ~~~~~~~~Dl~d~~~-~~--~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~ 157 (352)
T 1sb8_A 81 SNFKFIQGDIRNLDD-CN--NACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTY 157 (352)
T ss_dssp TTEEEEECCTTSHHH-HH--HHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGG
T ss_pred CceEEEECCCCCHHH-HH--HHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhc
Confidence 467889999987642 11 22335899999999521 1223333333357899999998876
Q ss_pred CCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCccc
Q psy16243 77 CRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDL 152 (782)
Q Consensus 77 ~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~ 152 (782)
.... .++|+- + ....+.|..+|..+|.+++.. ..+.+++++||..+.
T Consensus 158 ~~~~~~~~~E~~--------------------------~---~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~ 208 (352)
T 1sb8_A 158 GDHPGLPKVEDT--------------------------I---GKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVF 208 (352)
T ss_dssp TTCCCSSBCTTC--------------------------C---CCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEE
T ss_pred CCCCCCCCCCCC--------------------------C---CCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECcee
Confidence 5432 111110 0 001234888999999887641 124667888887765
Q ss_pred c
Q psy16243 153 G 153 (782)
Q Consensus 153 ~ 153 (782)
+
T Consensus 209 G 209 (352)
T 1sb8_A 209 G 209 (352)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=90.06 E-value=0.19 Score=52.47 Aligned_cols=86 Identities=14% Similarity=-0.097 Sum_probs=53.0
Q ss_pred ceeEEEecccccc-----------------ccccccccCCCCCCeEEEEecccccCCCC--CcceeccCCCCChhhHHHH
Q psy16243 39 PISASKNSTASLN-----------------SCLPGERLDHYTTESFVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQI 99 (782)
Q Consensus 39 ~v~~~i~~~~~~~-----------------~~~~~~~~~~~~l~~f~hvsta~~~~~~~--~ide~~y~~g~Ds~~~~~l 99 (782)
.+++|||||+..+ +..+.+.+...+.++|||+||........ .++|+--.
T Consensus 69 ~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~----------- 137 (321)
T 3vps_A 69 DVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPL----------- 137 (321)
T ss_dssp TEEEEEECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCC-----------
T ss_pred cCCEEEECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCC-----------
Confidence 4889999998522 11233333323468999999987755421 12221100
Q ss_pred HHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCC-eEEEeCCCcccc
Q psy16243 100 TELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGM-PVAMVRPSIDLG 153 (782)
Q Consensus 100 ~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~-~~~ivRps~~~~ 153 (782)
.-.+.|..+|...|.++... ..+. +++++||..+.+
T Consensus 138 ------------------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G 176 (321)
T 3vps_A 138 ------------------SPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYG 176 (321)
T ss_dssp ------------------CCCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEEC
T ss_pred ------------------CCCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccC
Confidence 01245889999999988762 2356 788999887654
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=89.88 E-value=0.2 Score=52.00 Aligned_cols=83 Identities=16% Similarity=0.107 Sum_probs=50.1
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|.++|||..|..|..+ ...|.. .+.+|++..|... ..++..+++..
T Consensus 116 ~l~gk~vlVtGaaGGiG~ai----a~~L~~---------------~G~~V~i~~R~~~--~~~~l~~~~~~--------- 165 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRS----AALLAG---------------EGAEVVLCGRKLD--KAQAAADSVNK--------- 165 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHH----HHHHHH---------------TTCEEEEEESSHH--HHHHHHHHHHH---------
T ss_pred CCCCCEEEEECCCcHHHHHH----HHHHHH---------------CcCEEEEEECCHH--HHHHHHHHHHh---------
Confidence 35678999999544333322 222321 1456888888632 12222222110
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcc
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAAT 294 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~ 294 (782)
..++.++.+|++++ +++.++++++|+|||+|+.
T Consensus 166 -----~~~~~~~~~D~~~~------~~~~~~~~~~DvlVn~ag~ 198 (287)
T 1lu9_A 166 -----RFKVNVTAAETADD------ASRAEAVKGAHFVFTAGAI 198 (287)
T ss_dssp -----HHTCCCEEEECCSH------HHHHHHTTTCSEEEECCCT
T ss_pred -----cCCcEEEEecCCCH------HHHHHHHHhCCEEEECCCc
Confidence 01456677898876 7888889999999999974
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=89.77 E-value=0.14 Score=55.18 Aligned_cols=111 Identities=14% Similarity=-0.004 Sum_probs=61.2
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEeccccc------------------cccccccccCCC-CCCeEEEEecccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL------------------NSCLPGERLDHY-TTESFVHVSTAYS 75 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~------------------~~~~~~~~~~~~-~l~~f~hvsta~~ 75 (782)
..++++.||+..++. +. .....+++|||||+.. ++..+.+.+... +.++|||+||+..
T Consensus 78 ~~v~~~~~Dl~d~~~-l~--~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~v 154 (377)
T 2q1s_A 78 PAVRFSETSITDDAL-LA--SLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCS 154 (377)
T ss_dssp TTEEEECSCTTCHHH-HH--HCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--
T ss_pred CceEEEECCCCCHHH-HH--HHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHH
Confidence 457788999877642 11 2233689999999962 122233333333 5789999999866
Q ss_pred cCCCC--Ccc--eeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCC
Q psy16243 76 NCRQP--IIE--ERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPS 149 (782)
Q Consensus 76 ~~~~~--~id--e~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps 149 (782)
.+... .++ |+-... |. ....+.|..+|..+|.++... ..+.+++++||.
T Consensus 155 yg~~~~~~~~~~E~~~~~-----------------------~~--~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~ 209 (377)
T 2q1s_A 155 IAEKTFDDAKATEETDIV-----------------------SL--HNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQ 209 (377)
T ss_dssp ------------CCCCCC-----------------------CS--SCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred cCCCCCCCcCcccccccc-----------------------cc--cCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeec
Confidence 44321 011 111000 00 001234888999999988752 125678899988
Q ss_pred cccc
Q psy16243 150 IDLG 153 (782)
Q Consensus 150 ~~~~ 153 (782)
.+.+
T Consensus 210 ~v~G 213 (377)
T 2q1s_A 210 NVYG 213 (377)
T ss_dssp CEEC
T ss_pred cEEC
Confidence 7654
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=89.49 E-value=1.1 Score=49.78 Aligned_cols=62 Identities=15% Similarity=0.077 Sum_probs=41.3
Q ss_pred ceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHH--hh-------HHHHHHHHHHHHHccCCc
Q psy16243 258 KMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVS--IN-------LRATKALLEMAKEMKQLK 326 (782)
Q Consensus 258 kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~--~N-------v~gt~~Lle~a~~~~~~~ 326 (782)
++..+.+|+++. +++.++++++|+|||+|+......-....++ .| ..++.+++++|++. +++
T Consensus 48 ~~~~~~~Dv~d~------~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv~ 118 (450)
T 1ff9_A 48 HSTPISLDVNDD------AALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GIT 118 (450)
T ss_dssp TEEEEECCTTCH------HHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TCE
T ss_pred CceEEEeecCCH------HHHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CCe
Confidence 466788998876 7888888999999999986322111122222 23 24688999999987 553
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=89.15 E-value=0.2 Score=48.91 Aligned_cols=92 Identities=18% Similarity=0.161 Sum_probs=60.9
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEeccccc----------------cccccccccCCCCCCeEEEEecccccCC
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL----------------NSCLPGERLDHYTTESFVHVSTAYSNCR 78 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~----------------~~~~~~~~~~~~~l~~f~hvsta~~~~~ 78 (782)
.+++++.||+..++. +.. .. +++|||||+.. ++..+.+.+...+.++|+|+||.....+
T Consensus 46 ~~~~~~~~D~~~~~~-~~~--~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~ 120 (215)
T 2a35_A 46 PRLDNPVGPLAELLP-QLD--GS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK 120 (215)
T ss_dssp TTEECCBSCHHHHGG-GCC--SC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT
T ss_pred CCceEEeccccCHHH-HHH--hh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC
Confidence 356778889877643 211 11 89999999852 2222333333345689999999776421
Q ss_pred CCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCCe-EEEeCCCcccc
Q psy16243 79 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMP-VAMVRPSIDLG 153 (782)
Q Consensus 79 ~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~~-~~ivRps~~~~ 153 (782)
.++.|..+|..+|.+++.. +.+ +.++||....+
T Consensus 121 ----------------------------------------~~~~y~~sK~~~e~~~~~~--~~~~~~~vrp~~v~g 154 (215)
T 2a35_A 121 ----------------------------------------SSIFYNRVKGELEQALQEQ--GWPQLTIARPSLLFG 154 (215)
T ss_dssp ----------------------------------------CSSHHHHHHHHHHHHHTTS--CCSEEEEEECCSEES
T ss_pred ----------------------------------------CccHHHHHHHHHHHHHHHc--CCCeEEEEeCceeeC
Confidence 0234888899999998763 466 88999987754
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=89.13 E-value=0.14 Score=53.95 Aligned_cols=106 Identities=16% Similarity=0.065 Sum_probs=61.3
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccccc------------------ccccccccC-CCCCCeEEEEeccccc
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN------------------SCLPGERLD-HYTTESFVHVSTAYSN 76 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~------------------~~~~~~~~~-~~~l~~f~hvsta~~~ 76 (782)
.+.++.||+..++. +. .....+++|||||+... +..+.+.+. ....++|||+||....
T Consensus 55 ~~~~~~~Dl~d~~~-~~--~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vy 131 (336)
T 2hun_A 55 RYTFVKGDVADYEL-VK--ELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVY 131 (336)
T ss_dssp TEEEEECCTTCHHH-HH--HHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGG
T ss_pred ceEEEEcCCCCHHH-HH--HHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHH
Confidence 56778899876642 10 11235899999999621 222222222 2124799999998654
Q ss_pred CCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCccc
Q psy16243 77 CRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDL 152 (782)
Q Consensus 77 ~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~ 152 (782)
+... .++|+--. .-.+.|..+|..+|.+++.. ..+.+++++||..+.
T Consensus 132 g~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~ 182 (336)
T 2hun_A 132 GDILKGSFTENDRL-----------------------------MPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNY 182 (336)
T ss_dssp CCCSSSCBCTTBCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEE
T ss_pred CCCCCCCcCCCCCC-----------------------------CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeee
Confidence 4321 11211000 01234888999999887652 235678889988765
Q ss_pred c
Q psy16243 153 G 153 (782)
Q Consensus 153 ~ 153 (782)
+
T Consensus 183 g 183 (336)
T 2hun_A 183 G 183 (336)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=89.06 E-value=0.088 Score=57.13 Aligned_cols=116 Identities=17% Similarity=0.060 Sum_probs=64.0
Q ss_pred ceeeecCcCccCCCCCCc-cccCceeEEEeccccc------------------cccccccccCCCCCCeEEEEecccccC
Q psy16243 17 IFEGEGLSGILSLGLNLN-QKSGPISASKNSTASL------------------NSCLPGERLDHYTTESFVHVSTAYSNC 77 (782)
Q Consensus 17 ~~~~~gd~~~~~~~~~~~-~~~~~v~~~i~~~~~~------------------~~~~~~~~~~~~~l~~f~hvsta~~~~ 77 (782)
++++.||+..++. +..- .....+++|||||+.. ++..+.+.+...+.++|||+||+....
T Consensus 71 ~~~~~~Dl~d~~~-~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g 149 (397)
T 1gy8_A 71 AALEVGDVRNEDF-LNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFG 149 (397)
T ss_dssp CEEEESCTTCHHH-HHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTB
T ss_pred EEEEECCCCCHHH-HHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhC
Confidence 7889999987753 2110 1112399999999952 222333333333578999999987654
Q ss_pred CCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCcccc
Q psy16243 78 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 78 ~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~ 153 (782)
... ...+.+.+. .+.+. .+ ..-.+.|..+|..+|.++... ..+.+++++||..+.+
T Consensus 150 ~~~--~~~~~~~~~----------~~~E~-----~~---~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G 207 (397)
T 1gy8_A 150 NPT--MGSVSTNAE----------PIDIN-----AK---KSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACG 207 (397)
T ss_dssp SCC--C-----CCC----------CBCTT-----SC---CBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEEC
T ss_pred CCC--ccccccccc----------CcCcc-----CC---CCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeC
Confidence 321 000110000 00000 01 011245889999999987752 1256778889887654
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=89.05 E-value=0.16 Score=52.08 Aligned_cols=106 Identities=12% Similarity=-0.059 Sum_probs=61.6
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccc--------------ccccccccccCCCCCCeEEEEecccccCCCC
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS--------------LNSCLPGERLDHYTTESFVHVSTAYSNCRQP 80 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~--------------~~~~~~~~~~~~~~l~~f~hvsta~~~~~~~ 80 (782)
..+.++.||+..++. + +.....+++|||+|+. .++..+.+.+...+..++||+||........
T Consensus 43 ~~~~~~~~Dl~d~~~-~--~~~~~~~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~ 119 (267)
T 3rft_A 43 PNEECVQCDLADANA-V--NAMVAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYP 119 (267)
T ss_dssp TTEEEEECCTTCHHH-H--HHHHTTCSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSB
T ss_pred CCCEEEEcCCCCHHH-H--HHHHcCCCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCC
Confidence 356778889876542 1 1223358999999986 2222333333333568999999987654211
Q ss_pred ---CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCccc
Q psy16243 81 ---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDL 152 (782)
Q Consensus 81 ---~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~ 152 (782)
.++|+.-. ...+.|..+|..+|.+.+.. ..+...+++||..+.
T Consensus 120 ~~~~~~e~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~ 167 (267)
T 3rft_A 120 QTERLGPDVPA-----------------------------RPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCT 167 (267)
T ss_dssp TTSCBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCS
T ss_pred CCCCCCCCCCC-----------------------------CCCChHHHHHHHHHHHHHHHHHHhCCeEEEEEeeccc
Confidence 11111100 01134888899888887641 224566778877654
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=89.01 E-value=0.099 Score=55.39 Aligned_cols=121 Identities=13% Similarity=0.026 Sum_probs=63.8
Q ss_pred ccceeeecCcCccCCCCCCccccCc--eeEEEecccccc------------------ccccccccCCCCC-CeEEEEecc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGP--ISASKNSTASLN------------------SCLPGERLDHYTT-ESFVHVSTA 73 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~--v~~~i~~~~~~~------------------~~~~~~~~~~~~l-~~f~hvsta 73 (782)
.++.++.||+..++. +. ..... +++|||||+... +..+.+.+..... .+|||+||+
T Consensus 50 ~~~~~~~~Dl~d~~~-~~--~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~ 126 (347)
T 1orr_A 50 GNFEFVHGDIRNKND-VT--RLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTN 126 (347)
T ss_dssp CCCEEEECCTTCHHH-HH--HHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEG
T ss_pred CceEEEEcCCCCHHH-HH--HHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccH
Confidence 457889999987643 11 12223 899999999521 2222333332123 389999998
Q ss_pred cccCCCCC--ccee--ccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeC
Q psy16243 74 YSNCRQPI--IEER--FYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVR 147 (782)
Q Consensus 74 ~~~~~~~~--ide~--~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivR 147 (782)
........ ..|+ -+....+. ..+.+. .| ....+.|..+|..+|.++... ..+.+++++|
T Consensus 127 ~v~g~~~~~~~~e~~~~~~~~~~~-------~~~~e~-----~~---~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilr 191 (347)
T 1orr_A 127 KVYGDLEQYKYNETETRYTCVDKP-------NGYDES-----TQ---LDFHSPYGCSKGAADQYMLDYARIFGLNTVVFR 191 (347)
T ss_dssp GGGTTCTTSCEEECSSCEEETTCT-------TCBCTT-----SC---CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHhCCCCcCCcccccccccccccc-------cCcccc-----CC---CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEc
Confidence 76543221 1110 00000000 000000 00 011245889999999988752 1256788999
Q ss_pred CCcccc
Q psy16243 148 PSIDLG 153 (782)
Q Consensus 148 ps~~~~ 153 (782)
|..+.+
T Consensus 192 p~~v~g 197 (347)
T 1orr_A 192 HSSMYG 197 (347)
T ss_dssp ECCEEC
T ss_pred cCceeC
Confidence 887654
|
| >2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.94 E-value=0.11 Score=45.69 Aligned_cols=60 Identities=5% Similarity=-0.012 Sum_probs=48.1
Q ss_pred CCCCCcceeccCCCCChhhHHHHHHhcchhhh-hhhccCccccCCccchhhHHHHHHHHHh
Q psy16243 77 CRQPIIEERFYEPPVNPNHLIQITELLNDDMI-DKITPGIVDYWPNTYALTKQVAEDMVRR 136 (782)
Q Consensus 77 ~~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~-~~~~p~li~~~Pnt~~l~k~L~E~Ll~~ 136 (782)
.+...++++||+.|.+|+.+.+++..+++... -.+...-++.+|+...++..+.+.+-..
T Consensus 41 ~~~i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~~~~~~~ 101 (110)
T 2cq8_A 41 VLEVEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRKLRGD 101 (110)
T ss_dssp CSCCCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHhcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHHHHhccc
Confidence 35567899999999999999999999988764 4444456889999999998887666543
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=88.84 E-value=0.11 Score=55.60 Aligned_cols=33 Identities=24% Similarity=0.431 Sum_probs=23.6
Q ss_pred ccchhhHHHHHHHHHhc--CCCCeEEEeCCCcccc
Q psy16243 121 NTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 121 nt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~ 153 (782)
+.|..+|..+|.+++.. ..+.+++++||..+.+
T Consensus 165 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G 199 (361)
T 1kew_A 165 SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYG 199 (361)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEES
T ss_pred CccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeEC
Confidence 45889999999988752 1246778888876654
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=88.69 E-value=0.22 Score=53.07 Aligned_cols=95 Identities=16% Similarity=0.062 Sum_probs=60.7
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccccc------------------ccccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN------------------SCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~------------------~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
.++..+.||+..++. +. .....+++|||+||... +..+.+.+...+.++||++||..+.
T Consensus 70 ~~v~~~~~Dl~d~~~-l~--~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~ 146 (344)
T 2gn4_A 70 PRMRFFIGDVRDLER-LN--YALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA 146 (344)
T ss_dssp TTEEEEECCTTCHHH-HH--HHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS
T ss_pred CCEEEEECCCCCHHH-HH--HHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC
Confidence 467889999977643 11 22335899999998521 1222233333357899999995321
Q ss_pred CCCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcC-----CCCeEEEeCCCcc
Q psy16243 77 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG-----AGMPVAMVRPSID 151 (782)
Q Consensus 77 ~~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~-----~~~~~~ivRps~~ 151 (782)
. | .+.|..+|..+|.++.... .+..++++||..+
T Consensus 147 ~-----------------------------------p------~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v 185 (344)
T 2gn4_A 147 N-----------------------------------P------INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNV 185 (344)
T ss_dssp S-----------------------------------C------CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEE
T ss_pred C-----------------------------------C------ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccE
Confidence 0 0 1348899999999987522 3467788898876
Q ss_pred cc
Q psy16243 152 LG 153 (782)
Q Consensus 152 ~~ 153 (782)
.+
T Consensus 186 ~g 187 (344)
T 2gn4_A 186 VG 187 (344)
T ss_dssp TT
T ss_pred EC
Confidence 54
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=88.69 E-value=0.23 Score=50.67 Aligned_cols=104 Identities=12% Similarity=-0.050 Sum_probs=60.7
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccccc--------------ccccccccCCCCCCeEEEEecccccCCCC-
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN--------------SCLPGERLDHYTTESFVHVSTAYSNCRQP- 80 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~--------------~~~~~~~~~~~~l~~f~hvsta~~~~~~~- 80 (782)
...++.||+..++. + ......+++|||||+... +..+.+.+...+.++|||+||........
T Consensus 43 ~~~~~~~Dl~d~~~-~--~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~ 119 (267)
T 3ay3_A 43 HEEIVACDLADAQA-V--HDLVKDCDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPR 119 (267)
T ss_dssp TEEECCCCTTCHHH-H--HHHHTTCSEEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBT
T ss_pred CccEEEccCCCHHH-H--HHHHcCCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCC
Confidence 35778888876532 1 122335899999998621 12222333333578999999987654321
Q ss_pred --CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHh--cCCCCeEEEeCCCcc
Q psy16243 81 --IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR--GGAGMPVAMVRPSID 151 (782)
Q Consensus 81 --~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~--~~~~~~~~ivRps~~ 151 (782)
.++|+- | ....+.|..+|..+|.+.+. ...+.+++++||...
T Consensus 120 ~~~~~E~~--------------------------~---~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v 165 (267)
T 3ay3_A 120 TTRIDTEV--------------------------P---RRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSC 165 (267)
T ss_dssp TSCBCTTS--------------------------C---CCCCSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBC
T ss_pred CCCCCCCC--------------------------C---CCCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeceee
Confidence 111110 0 00113488889999888764 233567788888765
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=88.67 E-value=0.21 Score=51.27 Aligned_cols=91 Identities=10% Similarity=0.003 Sum_probs=59.3
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEeccccc--------cccccccccCCCCCCeEEEEecccccCCCCCcceecc
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL--------NSCLPGERLDHYTTESFVHVSTAYSNCRQPIIEERFY 87 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~--------~~~~~~~~~~~~~l~~f~hvsta~~~~~~~~ide~~y 87 (782)
.++++.||+..++. +. .....+++|||||+.. ++..+.+.+...+.++|||+||.....
T Consensus 46 ~~~~~~~D~~d~~~-l~--~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~---------- 112 (287)
T 2jl1_A 46 GVEVRHGDYNQPES-LQ--KAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE---------- 112 (287)
T ss_dssp TCEEEECCTTCHHH-HH--HHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG----------
T ss_pred CCeEEEeccCCHHH-HH--HHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC----------
Confidence 56788999987643 11 2233589999999851 222233333334578999999987520
Q ss_pred CCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCCeEEEeCCCccc
Q psy16243 88 EPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIDL 152 (782)
Q Consensus 88 ~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~~ 152 (782)
.|..|..+|..+|.+++. .+.+++++||....
T Consensus 113 -------------------------------~~~~y~~~K~~~E~~~~~--~~~~~~ilrp~~~~ 144 (287)
T 2jl1_A 113 -------------------------------SIIPLAHVHLATEYAIRT--TNIPYTFLRNALYT 144 (287)
T ss_dssp -------------------------------CCSTHHHHHHHHHHHHHH--TTCCEEEEEECCBH
T ss_pred -------------------------------CCCchHHHHHHHHHHHHH--cCCCeEEEECCEec
Confidence 012377889999999876 35678899986543
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=88.21 E-value=0.11 Score=54.04 Aligned_cols=106 Identities=10% Similarity=-0.136 Sum_probs=62.0
Q ss_pred cceeeecCcCccCCCCCCccccC--ceeEEEeccccc-----------------cccccccccCCCCCCeEEEEeccccc
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSG--PISASKNSTASL-----------------NSCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~--~v~~~i~~~~~~-----------------~~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
.++++.||+..++. +. .... .+++|||||+.. ++..+.+.+...+.++|||+||+...
T Consensus 46 ~~~~~~~D~~d~~~-~~--~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~ 122 (312)
T 2yy7_A 46 SGPFEVVNALDFNQ-IE--HLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVF 122 (312)
T ss_dssp SSCEEECCTTCHHH-HH--HHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGC
T ss_pred CCceEEecCCCHHH-HH--HHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHh
Confidence 46788899876542 11 1122 589999999862 12223333333457899999998775
Q ss_pred CCCC---CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCcc
Q psy16243 77 CRQP---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSID 151 (782)
Q Consensus 77 ~~~~---~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~ 151 (782)
.... .++|+-.. .-.+.|..+|..+|.++... ..+.+++++||..+
T Consensus 123 ~~~~~~~~~~e~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v 173 (312)
T 2yy7_A 123 GPTTPKENTPQYTIM-----------------------------EPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGL 173 (312)
T ss_dssp CTTSCSSSBCSSCBC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEE
T ss_pred CCCCCCCCccccCcC-----------------------------CCCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeE
Confidence 5421 11121100 00134888899999887652 12467788887765
Q ss_pred cc
Q psy16243 152 LG 153 (782)
Q Consensus 152 ~~ 153 (782)
.+
T Consensus 174 ~g 175 (312)
T 2yy7_A 174 IS 175 (312)
T ss_dssp EC
T ss_pred ec
Confidence 43
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=88.17 E-value=0.15 Score=54.06 Aligned_cols=120 Identities=19% Similarity=0.156 Sum_probs=61.9
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccccc------------------ccccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN------------------SCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~------------------~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
..+.++.||+..++. + +.....+++|||||+... +..+.+.+...+. +|||+||+...
T Consensus 54 ~~~~~~~~Dl~d~~~-~--~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vy 129 (348)
T 1oc2_A 54 DRVELVVGDIADAEL-V--DKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVY 129 (348)
T ss_dssp SSEEEEECCTTCHHH-H--HHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGG
T ss_pred CCeEEEECCCCCHHH-H--HHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEeccccee
Confidence 356788899876642 1 122334799999999521 2222222222234 99999998664
Q ss_pred CCCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCcccc
Q psy16243 77 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 77 ~~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~ 153 (782)
+.... +......+... ...+.+. .| ....+.|..+|..+|.++... ..+..++++||..+.+
T Consensus 130 g~~~~-~~~~~~~~~~~------~~~~~E~-----~~---~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G 193 (348)
T 1oc2_A 130 GDLPL-REDLPGHGEGP------GEKFTAE-----TN---YNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYG 193 (348)
T ss_dssp CCBCC-GGGSTTTTCST------TSSBCTT-----SC---CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEES
T ss_pred CCCcc-ccccccccccc------CCCcCCC-----CC---CCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeC
Confidence 43210 00000000000 0000000 00 011245888999999887652 1246778889887654
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=88.00 E-value=0.11 Score=55.05 Aligned_cols=114 Identities=17% Similarity=0.082 Sum_probs=63.3
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccccc------------------ccccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN------------------SCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~------------------~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
..++++.||+..+...+. .....+++|||||+... +..+.+.+...+ ++|||+||+...
T Consensus 45 ~~~~~~~~D~~~~~~~~~--~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~ 121 (345)
T 2bll_A 45 PHFHFVEGDISIHSEWIE--YHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVY 121 (345)
T ss_dssp TTEEEEECCTTTCSHHHH--HHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGG
T ss_pred CCeEEEeccccCcHHHHH--hhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHc
Confidence 457889999876432111 12224899999998521 122233333234 899999998765
Q ss_pred CCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCccc
Q psy16243 77 CRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDL 152 (782)
Q Consensus 77 ~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~ 152 (782)
.... .++|+-...... | .....+.|..+|..+|.++... ..+.+++++||..+.
T Consensus 122 g~~~~~~~~e~~~~~~~~--------------------~--~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~ 179 (345)
T 2bll_A 122 GMCSDKYFDEDHSNLIVG--------------------P--VNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWM 179 (345)
T ss_dssp BTCCCSSBCTTTCCCBCC--------------------C--TTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEE
T ss_pred CCCCCCCcCCcccccccC--------------------c--ccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 4321 122221100000 0 0001134888999999988642 225678889988765
Q ss_pred c
Q psy16243 153 G 153 (782)
Q Consensus 153 ~ 153 (782)
+
T Consensus 180 G 180 (345)
T 2bll_A 180 G 180 (345)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=87.96 E-value=0.28 Score=51.74 Aligned_cols=104 Identities=16% Similarity=0.125 Sum_probs=63.6
Q ss_pred cccceeeecCcCccCCCCCCccccC--ceeEEEeccccccc---------------cccccccCCCCCCeEEEEeccccc
Q psy16243 14 FEEIFEGEGLSGILSLGLNLNQKSG--PISASKNSTASLNS---------------CLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 14 ~~~~~~~~gd~~~~~~~~~~~~~~~--~v~~~i~~~~~~~~---------------~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
+..+.++.||+..++. +. .... .+++|||||+.... ..+.+.+...+.++|||+||....
T Consensus 64 l~~v~~~~~Dl~d~~~-~~--~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~ 140 (330)
T 2pzm_A 64 VAGLSVIEGSVTDAGL-LE--RAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCY 140 (330)
T ss_dssp CTTEEEEECCTTCHHH-HH--HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGG
T ss_pred cCCceEEEeeCCCHHH-HH--HHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHh
Confidence 4567788999876642 11 1222 58999999995321 122222222346899999998775
Q ss_pred CCCC----CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCCeEEEeCCCccc
Q psy16243 77 CRQP----IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIDL 152 (782)
Q Consensus 77 ~~~~----~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~~ 152 (782)
.... .++|+- ...+.|..+|..+|.+++.. ....+++||....
T Consensus 141 ~~~~~~~~~~~E~~-------------------------------~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~ 187 (330)
T 2pzm_A 141 GRPATVPIPIDSPT-------------------------------APFTSYGISKTAGEAFLMMS--DVPVVSLRLANVT 187 (330)
T ss_dssp CSCSSSSBCTTCCC-------------------------------CCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEE
T ss_pred CCCccCCCCcCCCC-------------------------------CCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeE
Confidence 4321 111110 01234889999999998875 5667788876654
Q ss_pred c
Q psy16243 153 G 153 (782)
Q Consensus 153 ~ 153 (782)
+
T Consensus 188 g 188 (330)
T 2pzm_A 188 G 188 (330)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=87.95 E-value=0.26 Score=52.16 Aligned_cols=107 Identities=16% Similarity=0.024 Sum_probs=63.9
Q ss_pred cceeeecCcCccCCCCCCccccC--ceeEEEeccccc------------------cccccccccCCCCCCeEEEEecccc
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSG--PISASKNSTASL------------------NSCLPGERLDHYTTESFVHVSTAYS 75 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~--~v~~~i~~~~~~------------------~~~~~~~~~~~~~l~~f~hvsta~~ 75 (782)
+++++.||+..++. +. .... .+++|||||+.. ++..+.+.+...+.++|||+||+..
T Consensus 59 ~~~~~~~D~~~~~~-~~--~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~ 135 (348)
T 1ek6_A 59 SVEFEEMDILDQGA-LQ--RLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATV 135 (348)
T ss_dssp CCEEEECCTTCHHH-HH--HHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred ceEEEECCCCCHHH-HH--HHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHH
Confidence 56889999987643 11 1122 589999999852 2233334444335689999999876
Q ss_pred cCCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc---CCCCeEEEeCCCc
Q psy16243 76 NCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG---GAGMPVAMVRPSI 150 (782)
Q Consensus 76 ~~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~---~~~~~~~ivRps~ 150 (782)
..... .++|+- |. ....+.|..+|..+|.+++.. ..+.+++++||..
T Consensus 136 ~g~~~~~~~~E~~--------------------------~~--~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~ 187 (348)
T 1ek6_A 136 YGNPQYLPLDEAH--------------------------PT--GGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFN 187 (348)
T ss_dssp GCSCSSSSBCTTS--------------------------CC--CCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECE
T ss_pred hCCCCCCCcCCCC--------------------------CC--CCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeecc
Confidence 54311 111110 00 001245889999999987652 2237888899876
Q ss_pred ccc
Q psy16243 151 DLG 153 (782)
Q Consensus 151 ~~~ 153 (782)
+.+
T Consensus 188 v~G 190 (348)
T 1ek6_A 188 PTG 190 (348)
T ss_dssp EEC
T ss_pred ccC
Confidence 643
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=87.93 E-value=0.86 Score=47.77 Aligned_cols=123 Identities=11% Similarity=0.001 Sum_probs=64.6
Q ss_pred ccceee-ecCcCccCCCCCCccccCceeEEEecccccc---------------ccccccccC-CCCCCeEEEEecccccC
Q psy16243 15 EEIFEG-EGLSGILSLGLNLNQKSGPISASKNSTASLN---------------SCLPGERLD-HYTTESFVHVSTAYSNC 77 (782)
Q Consensus 15 ~~~~~~-~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~---------------~~~~~~~~~-~~~l~~f~hvsta~~~~ 77 (782)
.+++++ .||+..++. +. .....+++|||||+... +..+.+.+. ..+.++|||+||..+..
T Consensus 61 ~~~~~~~~~D~~d~~~-~~--~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~ 137 (342)
T 1y1p_A 61 GRFETAVVEDMLKQGA-YD--EVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSAL 137 (342)
T ss_dssp TTEEEEECSCTTSTTT-TT--TTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTC
T ss_pred CceEEEEecCCcChHH-HH--HHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhc
Confidence 356677 899987754 22 22336899999998521 222223222 23578999999987653
Q ss_pred CC------CCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc----CCCCeEEEeC
Q psy16243 78 RQ------PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG----GAGMPVAMVR 147 (782)
Q Consensus 78 ~~------~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~----~~~~~~~ivR 147 (782)
.. ..++|+-+ .........+ . .+.......+.|..+|...|.++... ..+..+.++|
T Consensus 138 ~~~~~~~~~~~~E~~~----~~~~~~~~~~---~------~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~r 204 (342)
T 1y1p_A 138 IPKPNVEGIYLDEKSW----NLESIDKAKT---L------PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVL 204 (342)
T ss_dssp CCCTTCCCCEECTTCC----CHHHHHHHHH---S------CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEE
T ss_pred CCCCCCCCcccCcccc----Cchhhhhhcc---c------cccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEc
Confidence 21 11222211 1111000000 0 00000001135899999999887652 2245677888
Q ss_pred CCcccc
Q psy16243 148 PSIDLG 153 (782)
Q Consensus 148 ps~~~~ 153 (782)
|..+.+
T Consensus 205 p~~v~g 210 (342)
T 1y1p_A 205 PNYTIG 210 (342)
T ss_dssp ESEEEC
T ss_pred CCceEC
Confidence 876643
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=87.69 E-value=0.12 Score=54.07 Aligned_cols=106 Identities=8% Similarity=-0.078 Sum_probs=61.3
Q ss_pred cceeeecCcCccCCCCCCccccC--ceeEEEecccccc------------------ccccccccC-CCCCCeEEEEeccc
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSG--PISASKNSTASLN------------------SCLPGERLD-HYTTESFVHVSTAY 74 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~--~v~~~i~~~~~~~------------------~~~~~~~~~-~~~l~~f~hvsta~ 74 (782)
.+.++.||+..++. +. .... .+++|||||+... +..+.+.+. ..+.++|||+||..
T Consensus 52 ~~~~~~~Dl~d~~~-~~--~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~ 128 (321)
T 2pk3_A 52 NVEMISLDIMDSQR-VK--KVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSE 128 (321)
T ss_dssp TEEEEECCTTCHHH-HH--HHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGG
T ss_pred eeeEEECCCCCHHH-HH--HHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHH
Confidence 46778899876532 11 1111 2899999999621 222222222 12468999999987
Q ss_pred ccCCC----CCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCC
Q psy16243 75 SNCRQ----PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRP 148 (782)
Q Consensus 75 ~~~~~----~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRp 148 (782)
..... ..++|+-- ....+.|..+|..+|.+++.. ..+..++++||
T Consensus 129 v~g~~~~~~~~~~E~~~-----------------------------~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp 179 (321)
T 2pk3_A 129 EYGMILPEESPVSEENQ-----------------------------LRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRT 179 (321)
T ss_dssp GTBSCCGGGCSBCTTSC-----------------------------CBCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred hcCCCCCCCCCCCCCCC-----------------------------CCCCCccHHHHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 65432 11111100 011235889999999988752 12467788898
Q ss_pred Ccccc
Q psy16243 149 SIDLG 153 (782)
Q Consensus 149 s~~~~ 153 (782)
..+.+
T Consensus 180 ~~v~g 184 (321)
T 2pk3_A 180 FNHIG 184 (321)
T ss_dssp CEEEC
T ss_pred CcccC
Confidence 87654
|
| >2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A* | Back alignment and structure |
|---|
Probab=87.58 E-value=0.13 Score=43.79 Aligned_cols=57 Identities=11% Similarity=0.135 Sum_probs=47.7
Q ss_pred CCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHH
Q psy16243 79 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 135 (782)
Q Consensus 79 ~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~ 135 (782)
....+..|++.|+||+.+++++..+.+...-.+.+..++.+|+...+++++.+.+-.
T Consensus 40 ~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~~~~ 96 (99)
T 2liu_A 40 EIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQILSS 96 (99)
T ss_dssp GCCSSSCHHHHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHHHHHHHH
T ss_pred HcCCCCCHHHhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHhhc
Confidence 455688899999999999999999998876667777788999999998888877644
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=87.01 E-value=0.16 Score=54.21 Aligned_cols=107 Identities=15% Similarity=0.012 Sum_probs=62.4
Q ss_pred ccceeeecCcCccCCCCCCccccC--ceeEEEeccccc------------------cccccccccC-CCCCCeEEEEecc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSG--PISASKNSTASL------------------NSCLPGERLD-HYTTESFVHVSTA 73 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~--~v~~~i~~~~~~------------------~~~~~~~~~~-~~~l~~f~hvsta 73 (782)
.++.++.||+..++. +. .... .+++|||||+.. ++..+.+.+. ..+.++|||+||.
T Consensus 57 ~~~~~~~~Dl~d~~~-~~--~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~ 133 (357)
T 1rkx_A 57 DGMQSEIGDIRDQNK-LL--ESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSD 133 (357)
T ss_dssp TTSEEEECCTTCHHH-HH--HHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCG
T ss_pred CceEEEEccccCHHH-HH--HHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCH
Confidence 467888999987643 11 1111 289999999941 1112222222 2236899999998
Q ss_pred cccCCCCC---cceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc-----------CC
Q psy16243 74 YSNCRQPI---IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----------GA 139 (782)
Q Consensus 74 ~~~~~~~~---ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~-----------~~ 139 (782)
...++... ++|+- + ....+.|..+|..+|.++... ..
T Consensus 134 ~vyg~~~~~~~~~E~~--------------------------~---~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~ 184 (357)
T 1rkx_A 134 KCYDNKEWIWGYRENE--------------------------A---MGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQH 184 (357)
T ss_dssp GGBCCCCSSSCBCTTS--------------------------C---BCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHH
T ss_pred HHhCCCCcCCCCCCCC--------------------------C---CCCCCccHHHHHHHHHHHHHHHHHHhhhhccccC
Confidence 76543221 11110 0 001234888999999887652 12
Q ss_pred CCeEEEeCCCcccc
Q psy16243 140 GMPVAMVRPSIDLG 153 (782)
Q Consensus 140 ~~~~~ivRps~~~~ 153 (782)
+.+++++||..+.+
T Consensus 185 gi~~~~lrp~~v~G 198 (357)
T 1rkx_A 185 GTAVATVRAGNVIG 198 (357)
T ss_dssp CCEEEEEECCCEEC
T ss_pred CceEEEEeeceeeC
Confidence 57788999887754
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=86.96 E-value=0.24 Score=50.75 Aligned_cols=91 Identities=12% Similarity=-0.045 Sum_probs=58.2
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccc------ccccccccccCCCCCCeEEEEecccccCCCCCcceeccCC
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS------LNSCLPGERLDHYTTESFVHVSTAYSNCRQPIIEERFYEP 89 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~------~~~~~~~~~~~~~~l~~f~hvsta~~~~~~~~ide~~y~~ 89 (782)
.++++.||+..++. +. .....+++|||+|+. .++..+.+.+...+.++|||+||.....
T Consensus 45 ~~~~~~~D~~d~~~-~~--~~~~~~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~------------ 109 (286)
T 2zcu_A 45 GITVRQADYGDEAA-LT--SALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADT------------ 109 (286)
T ss_dssp TCEEEECCTTCHHH-HH--HHTTTCSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEETTTTT------------
T ss_pred CCeEEEcCCCCHHH-HH--HHHhCCCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC------------
Confidence 56788999887643 11 233358999999985 2233333333333578999999986530
Q ss_pred CCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCCeEEEeCCCccc
Q psy16243 90 PVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIDL 152 (782)
Q Consensus 90 g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~~ 152 (782)
.|+.|..+|..+|.+++.. +.+++++||....
T Consensus 110 -----------------------------~~~~y~~sK~~~e~~~~~~--~~~~~ilrp~~~~ 141 (286)
T 2zcu_A 110 -----------------------------SPLGLADEHIETEKMLADS--GIVYTLLRNGWYS 141 (286)
T ss_dssp -----------------------------CCSTTHHHHHHHHHHHHHH--CSEEEEEEECCBH
T ss_pred -----------------------------CcchhHHHHHHHHHHHHHc--CCCeEEEeChHHh
Confidence 0123778899999988763 5678899986543
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=86.09 E-value=0.4 Score=46.27 Aligned_cols=98 Identities=9% Similarity=-0.034 Sum_probs=61.6
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccccc-----------ccccccccCCCCCCeEEEEecccccCCCCCcc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN-----------SCLPGERLDHYTTESFVHVSTAYSNCRQPIIE 83 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~-----------~~~~~~~~~~~~l~~f~hvsta~~~~~~~~id 83 (782)
..++++.||+..++. +. .....+++|||+|+... +..+.+.+...+.++|+|+||..........
T Consensus 46 ~~~~~~~~D~~~~~~-~~--~~~~~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~- 121 (206)
T 1hdo_A 46 RPAHVVVGDVLQAAD-VD--KTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV- 121 (206)
T ss_dssp CCSEEEESCTTSHHH-HH--HHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS-
T ss_pred CceEEEEecCCCHHH-HH--HHHcCCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccc-
Confidence 457788899876642 11 22334899999999632 2233333333356899999998765432210
Q ss_pred eeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCCeEEEeCCCcc
Q psy16243 84 ERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSID 151 (782)
Q Consensus 84 e~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~ 151 (782)
. . ..+.|..+|..+|.+++.. +.++.++||...
T Consensus 122 --------~-~------------------------~~~~y~~~K~~~e~~~~~~--~i~~~~lrp~~~ 154 (206)
T 1hdo_A 122 --------P-P------------------------RLQAVTDDHIRMHKVLRES--GLKYVAVMPPHI 154 (206)
T ss_dssp --------C-G------------------------GGHHHHHHHHHHHHHHHHT--CSEEEEECCSEE
T ss_pred --------c-c------------------------cchhHHHHHHHHHHHHHhC--CCCEEEEeCCcc
Confidence 0 0 0123778899999988753 467889998875
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=86.04 E-value=0.23 Score=53.62 Aligned_cols=115 Identities=14% Similarity=-0.011 Sum_probs=63.2
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccccc-------------------ccccccccCCCCCCeEEEEeccccc
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN-------------------SCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~-------------------~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
.++++.||+..++. +. .....+++|||||+... +..+.+.+...+.++|||+||+...
T Consensus 73 ~v~~~~~Dl~d~~~-~~--~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~ 149 (379)
T 2c5a_A 73 CDEFHLVDLRVMEN-CL--KVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIY 149 (379)
T ss_dssp CSEEEECCTTSHHH-HH--HHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGS
T ss_pred CceEEECCCCCHHH-HH--HHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehhee
Confidence 56788899876642 11 22335899999998522 1122223333357899999998765
Q ss_pred CCCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCcccc
Q psy16243 77 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDLG 153 (782)
Q Consensus 77 ~~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~~ 153 (782)
........+ .. .+.+... .+ ....+.|..+|..+|.+++.. ..+.+++++||..+.+
T Consensus 150 ~~~~~~~~~--~~------------~~~E~~~---~~---~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G 208 (379)
T 2c5a_A 150 PEFKQLETT--NV------------SLKESDA---WP---AEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYG 208 (379)
T ss_dssp CGGGSSSSS--SC------------EECGGGG---SS---BCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEC
T ss_pred CCCCCCCcc--CC------------CcCcccC---CC---CCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeC
Confidence 432110000 00 0000000 00 011235888999999887642 2256788999887754
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=85.83 E-value=0.47 Score=50.01 Aligned_cols=115 Identities=11% Similarity=0.050 Sum_probs=61.8
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEeccccccc-----------------cccccccC-CCCCCeEEEEecccccC
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLNS-----------------CLPGERLD-HYTTESFVHVSTAYSNC 77 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~~-----------------~~~~~~~~-~~~l~~f~hvsta~~~~ 77 (782)
.++++.||+..++. +. .....+++|||+|+.... ..+.+.+. ..+.++|||+||+.+-.
T Consensus 57 ~~~~~~~Dl~d~~~-~~--~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~ 133 (337)
T 2c29_D 57 HLTLWKADLADEGS-FD--EAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVN 133 (337)
T ss_dssp HEEEEECCTTSTTT-TH--HHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTS
T ss_pred eEEEEEcCCCCHHH-HH--HHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcc
Confidence 46788999987753 21 233358999999985211 11111111 11268999999986432
Q ss_pred CC----CCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCcc
Q psy16243 78 RQ----PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSID 151 (782)
Q Consensus 78 ~~----~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~ 151 (782)
.. ..++|+-.. ..... ... .+ -.+.|..+|.+.|.+.... ..+.+++++||..+
T Consensus 134 ~~~~~~~~~~E~~~~----~~~~~---~~~--------~~-----~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v 193 (337)
T 2c29_D 134 IQEHQLPVYDESCWS----DMEFC---RAK--------KM-----TAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLV 193 (337)
T ss_dssp CSSSCCSEECTTCCC----CHHHH---HHH--------CC-----TTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEE
T ss_pred cCCCCCcccCcccCC----chhhh---ccc--------CC-----ccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCce
Confidence 21 112222110 00000 000 00 0124889999999887541 22567788898876
Q ss_pred cc
Q psy16243 152 LG 153 (782)
Q Consensus 152 ~~ 153 (782)
.+
T Consensus 194 ~G 195 (337)
T 2c29_D 194 VG 195 (337)
T ss_dssp ES
T ss_pred EC
Confidence 54
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=85.67 E-value=0.25 Score=52.17 Aligned_cols=108 Identities=15% Similarity=0.083 Sum_probs=61.6
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEeccccc------------------cccccccccCCCCCCeEEEEecccccC
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL------------------NSCLPGERLDHYTTESFVHVSTAYSNC 77 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~------------------~~~~~~~~~~~~~l~~f~hvsta~~~~ 77 (782)
++.++.||+..++. +..--....+++|||||+.. ++..+.+.+...+.++|||+||+...+
T Consensus 51 ~~~~~~~Dl~~~~~-~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 129 (338)
T 1udb_A 51 HPTFVEGDIRNEAL-MTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYG 129 (338)
T ss_dssp CCEEEECCTTCHHH-HHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred cceEEEccCCCHHH-HHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhC
Confidence 46788999877643 11100001389999999851 222233333323468999999987654
Q ss_pred CCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHh---cCCCCeEEEeCCCccc
Q psy16243 78 RQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR---GGAGMPVAMVRPSIDL 152 (782)
Q Consensus 78 ~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~---~~~~~~~~ivRps~~~ 152 (782)
... .++|+. +. ....+.|..+|..+|.+++. ...+.+++++|+..+.
T Consensus 130 ~~~~~~~~e~~--------------------------~~--~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~ 181 (338)
T 1udb_A 130 DNPKIPYVESF--------------------------PT--GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPV 181 (338)
T ss_dssp SCCSSSBCTTS--------------------------CC--CCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEE
T ss_pred CCCCCCcCccc--------------------------CC--CCCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceec
Confidence 211 111110 00 00123488899999988765 2225778888987654
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=85.59 E-value=0.61 Score=46.38 Aligned_cols=96 Identities=16% Similarity=0.120 Sum_probs=60.8
Q ss_pred cc-eeeecCcCccCCCCCCccccCceeEEEeccccc--------------cccccccccCCCCCCeEEEEecccccCCCC
Q psy16243 16 EI-FEGEGLSGILSLGLNLNQKSGPISASKNSTASL--------------NSCLPGERLDHYTTESFVHVSTAYSNCRQP 80 (782)
Q Consensus 16 ~~-~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~--------------~~~~~~~~~~~~~l~~f~hvsta~~~~~~~ 80 (782)
.+ +++.||+. . .+. .....+++|||+|+.. ++..+.+.+...+.++|||+||..+..+.
T Consensus 65 ~~~~~~~~Dl~-~--~~~--~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~- 138 (236)
T 3e8x_A 65 GASDIVVANLE-E--DFS--HAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPD- 138 (236)
T ss_dssp TCSEEEECCTT-S--CCG--GGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGG-
T ss_pred CCceEEEcccH-H--HHH--HHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCC-
Confidence 56 88999998 1 121 3444699999999962 12233344443357899999994332210
Q ss_pred CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCCeEEEeCCCcccc
Q psy16243 81 IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 81 ~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~~~ 153 (782)
+ ++ ...+.|..+|..+|.+++. .+..+.++||....+
T Consensus 139 ---~-------~~------------------------~~~~~Y~~sK~~~e~~~~~--~gi~~~~lrpg~v~~ 175 (236)
T 3e8x_A 139 ---Q-------GP------------------------MNMRHYLVAKRLADDELKR--SSLDYTIVRPGPLSN 175 (236)
T ss_dssp ---G-------SC------------------------GGGHHHHHHHHHHHHHHHH--SSSEEEEEEECSEEC
T ss_pred ---C-------Ch------------------------hhhhhHHHHHHHHHHHHHH--CCCCEEEEeCCcccC
Confidence 0 00 0112388899999999885 356788999887754
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=85.00 E-value=0.3 Score=50.96 Aligned_cols=104 Identities=15% Similarity=-0.079 Sum_probs=59.7
Q ss_pred ceeeecCcCccCCCCCCccccC--ceeEEEeccccc-----------------cccccccccCCCCCCeEEEEecccccC
Q psy16243 17 IFEGEGLSGILSLGLNLNQKSG--PISASKNSTASL-----------------NSCLPGERLDHYTTESFVHVSTAYSNC 77 (782)
Q Consensus 17 ~~~~~gd~~~~~~~~~~~~~~~--~v~~~i~~~~~~-----------------~~~~~~~~~~~~~l~~f~hvsta~~~~ 77 (782)
..++.||+..++. +. .... .+++|||||+.. ++..+.+.+...+.++|||+||.....
T Consensus 41 ~~~~~~D~~d~~~-~~--~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 117 (317)
T 3ajr_A 41 IKFITLDVSNRDE-ID--RAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFG 117 (317)
T ss_dssp CCEEECCTTCHHH-HH--HHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCC
T ss_pred ceEEEecCCCHHH-HH--HHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhC
Confidence 4577788876532 11 1111 589999999852 122233333333578999999998765
Q ss_pred CCC---CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCCccc
Q psy16243 78 RQP---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIDL 152 (782)
Q Consensus 78 ~~~---~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps~~~ 152 (782)
... ..+|+- | ....+.|..+|...|.++... ..+.+++++|+....
T Consensus 118 ~~~~~~~~~e~~--------------------------~---~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~ 168 (317)
T 3ajr_A 118 PETPKNKVPSIT--------------------------I---TRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGII 168 (317)
T ss_dssp TTSCSSSBCSSS--------------------------C---CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred CCCCCCCccccc--------------------------c---CCCCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEe
Confidence 421 111110 0 001235888999999887641 224677888866543
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=84.98 E-value=0.46 Score=50.12 Aligned_cols=103 Identities=23% Similarity=0.225 Sum_probs=62.0
Q ss_pred ccceeeecCcCccCCCCCCccccCc--eeEEEeccccccc---------------cccccccCCCCCCeEEEEecccccC
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGP--ISASKNSTASLNS---------------CLPGERLDHYTTESFVHVSTAYSNC 77 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~--v~~~i~~~~~~~~---------------~~~~~~~~~~~l~~f~hvsta~~~~ 77 (782)
..++++.||+..++. +. ..... +++|||||+.... ..+.+.+...+.++|||+||+....
T Consensus 66 ~~~~~~~~Dl~d~~~-~~--~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g 142 (333)
T 2q1w_A 66 PNLTFVEGSIADHAL-VN--QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYG 142 (333)
T ss_dssp TTEEEEECCTTCHHH-HH--HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGC
T ss_pred CCceEEEEeCCCHHH-HH--HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
Confidence 567889999887643 11 12223 8999999996322 1222222233568999999987654
Q ss_pred ----CCC-CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHh-cCCCCeEEEeCCCcc
Q psy16243 78 ----RQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR-GGAGMPVAMVRPSID 151 (782)
Q Consensus 78 ----~~~-~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~-~~~~~~~~ivRps~~ 151 (782)
... .++|+- .| ..+.|..+|..+|.+++. .. +++++||..+
T Consensus 143 ~~~~~~~~~~~E~~-------------------------~p-----~~~~Y~~sK~~~E~~~~~s~~---~~~ilR~~~v 189 (333)
T 2q1w_A 143 VKPIQQPVRLDHPR-------------------------NP-----ANSSYAISKSANEDYLEYSGL---DFVTFRLANV 189 (333)
T ss_dssp SCCCSSSBCTTSCC-------------------------CC-----TTCHHHHHHHHHHHHHHHHTC---CEEEEEESEE
T ss_pred CCcccCCCCcCCCC-------------------------CC-----CCCchHHHHHHHHHHHHhhhC---CeEEEeeceE
Confidence 111 011110 00 013488999999999876 44 6778888765
Q ss_pred cc
Q psy16243 152 LG 153 (782)
Q Consensus 152 ~~ 153 (782)
.+
T Consensus 190 ~g 191 (333)
T 2q1w_A 190 VG 191 (333)
T ss_dssp ES
T ss_pred EC
Confidence 43
|
| >2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=84.96 E-value=0.26 Score=41.06 Aligned_cols=52 Identities=12% Similarity=0.112 Sum_probs=43.1
Q ss_pred CCCcceeccCCCCChhhHHHHHHhcchhhhhhhcc--CccccCCccchhhHHHH
Q psy16243 79 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITP--GIVDYWPNTYALTKQVA 130 (782)
Q Consensus 79 ~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p--~li~~~Pnt~~l~k~L~ 130 (782)
....+.+|++.|+||+.+++++..+.+...-.+.+ ..++.+|+...+++++.
T Consensus 30 ~i~~~~~~~~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~ 83 (89)
T 2kr5_A 30 ELTDDSNFADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFML 83 (89)
T ss_dssp GCCTTCBHHHHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHH
T ss_pred HCCCCCCHHHcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHH
Confidence 45568899999999999999999999887766777 78899999987765554
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=84.25 E-value=0.58 Score=46.13 Aligned_cols=56 Identities=13% Similarity=0.169 Sum_probs=48.1
Q ss_pred CCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHH
Q psy16243 78 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 133 (782)
Q Consensus 78 ~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~L 133 (782)
.+...+++|++.|+||+.+++++..+++...-.+.+..++.+|+...++.++.+.+
T Consensus 148 ~~i~~~~~f~~lG~DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~l~~~~ 203 (212)
T 2l22_A 148 GQLRSGAQFLDLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADEVDRRV 203 (212)
T ss_dssp SSCCSSCCGGGGCSSSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHHHHHHH
T ss_pred hhCCCCCCHHHhCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHh
Confidence 34556889999999999999999999998877788888999999998888877654
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=83.59 E-value=0.2 Score=52.72 Aligned_cols=106 Identities=12% Similarity=-0.055 Sum_probs=59.9
Q ss_pred ccceeeecCcCccCCCCCCccccC--ceeEEEecccccc------------------ccccccccCCCCC-CeEEEEecc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSG--PISASKNSTASLN------------------SCLPGERLDHYTT-ESFVHVSTA 73 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~--~v~~~i~~~~~~~------------------~~~~~~~~~~~~l-~~f~hvsta 73 (782)
..+.++.||+..++. +. .... .+++|||||+... +..+.+.+...+. ++|||+||+
T Consensus 63 ~~~~~~~~Dl~d~~~-~~--~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~ 139 (335)
T 1rpn_A 63 GDIQYEDGDMADACS-VQ--RAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTS 139 (335)
T ss_dssp GGEEEEECCTTCHHH-HH--HHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEG
T ss_pred CceEEEECCCCCHHH-HH--HHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCH
Confidence 457788999876542 11 1111 2699999999521 1122222222233 899999998
Q ss_pred cccCCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCC
Q psy16243 74 YSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPS 149 (782)
Q Consensus 74 ~~~~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps 149 (782)
....... .++|+--. .-.+.|..+|..+|.++... ..+.+++++||.
T Consensus 140 ~v~g~~~~~~~~E~~~~-----------------------------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~ 190 (335)
T 1rpn_A 140 EMFGLIQAERQDENTPF-----------------------------YPRSPYGVAKLYGHWITVNYRESFGLHASSGILF 190 (335)
T ss_dssp GGGCSCSSSSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred HHhCCCCCCCCCcccCC-----------------------------CCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeC
Confidence 7754322 11221100 00134889999999888752 124566777876
Q ss_pred ccc
Q psy16243 150 IDL 152 (782)
Q Consensus 150 ~~~ 152 (782)
...
T Consensus 191 ~v~ 193 (335)
T 1rpn_A 191 NHE 193 (335)
T ss_dssp CEE
T ss_pred ccc
Confidence 554
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=82.37 E-value=0.41 Score=56.30 Aligned_cols=113 Identities=18% Similarity=0.096 Sum_probs=64.3
Q ss_pred ccceeeecCcCccCCCCCCccccC--ceeEEEecccccc------------------ccccccccCCCCCCeEEEEeccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSG--PISASKNSTASLN------------------SCLPGERLDHYTTESFVHVSTAY 74 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~--~v~~~i~~~~~~~------------------~~~~~~~~~~~~l~~f~hvsta~ 74 (782)
.++.++.||+..++. +. .... .+++|||||+... +..+.+.+...+.++|||+||+.
T Consensus 61 ~~v~~v~~Dl~d~~~-l~--~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~ 137 (699)
T 1z45_A 61 HHIPFYEVDLCDRKG-LE--KVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSAT 137 (699)
T ss_dssp SCCCEEECCTTCHHH-HH--HHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGG
T ss_pred CceEEEEcCCCCHHH-HH--HHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHH
Confidence 356788999987642 11 1121 5899999999621 22233333323468999999987
Q ss_pred ccCCCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--C--CCCeEEEeCCCc
Q psy16243 75 SNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--G--AGMPVAMVRPSI 150 (782)
Q Consensus 75 ~~~~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~--~~~~~~ivRps~ 150 (782)
+.+.....++ .. +.+ +. .| ..-.+.|..+|..+|.+++.. . .+.+++++||..
T Consensus 138 vyg~~~~~~~-~~--~~~------------E~-----~~---~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~ 194 (699)
T 1z45_A 138 VYGDATRFPN-MI--PIP------------EE-----CP---LGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFN 194 (699)
T ss_dssp GGCCGGGSTT-CC--SBC------------TT-----SC---CCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECE
T ss_pred HhCCCccccc-cC--Ccc------------cc-----CC---CCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEecc
Confidence 7543210000 00 000 00 00 001145889999999987752 1 467889999876
Q ss_pred ccc
Q psy16243 151 DLG 153 (782)
Q Consensus 151 ~~~ 153 (782)
+.+
T Consensus 195 vyG 197 (699)
T 1z45_A 195 PIG 197 (699)
T ss_dssp EEC
T ss_pred ccC
Confidence 654
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=82.25 E-value=0.35 Score=50.37 Aligned_cols=106 Identities=15% Similarity=-0.029 Sum_probs=59.6
Q ss_pred cceeeecCcCccCCCCCCccccC--ceeEEEecccccc------------------ccccccccCCCCCCeEEEEecc-c
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSG--PISASKNSTASLN------------------SCLPGERLDHYTTESFVHVSTA-Y 74 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~--~v~~~i~~~~~~~------------------~~~~~~~~~~~~l~~f~hvsta-~ 74 (782)
.+.++.||+..++. +. .... .+++|||+|+... +..+.+.+...+.++|||+||. .
T Consensus 44 ~~~~~~~Dl~~~~~-~~--~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~ 120 (311)
T 2p5y_A 44 GVPFFRVDLRDKEG-VE--RAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGA 120 (311)
T ss_dssp TCCEECCCTTCHHH-HH--HHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHH
T ss_pred CeEEEECCCCCHHH-HH--HHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChh
Confidence 45678888876542 11 1111 4889999998521 2223333333356899999998 3
Q ss_pred ccCC---CCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCCC
Q psy16243 75 SNCR---QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPS 149 (782)
Q Consensus 75 ~~~~---~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRps 149 (782)
..+. ...++|+-.. .-.+.|..+|..+|.+++.. ..+..++++||.
T Consensus 121 ~~g~~~~~~~~~E~~~~-----------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~ 171 (311)
T 2p5y_A 121 IYGEVPEGERAEETWPP-----------------------------RPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYG 171 (311)
T ss_dssp HHCCCCTTCCBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred hcCCCCCCCCcCCCCCC-----------------------------CCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeec
Confidence 3221 1111221000 00134888999999887641 124677888987
Q ss_pred cccc
Q psy16243 150 IDLG 153 (782)
Q Consensus 150 ~~~~ 153 (782)
.+.+
T Consensus 172 ~v~G 175 (311)
T 2p5y_A 172 NVYG 175 (311)
T ss_dssp EEEC
T ss_pred cccC
Confidence 6654
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=81.95 E-value=0.35 Score=52.33 Aligned_cols=121 Identities=12% Similarity=0.006 Sum_probs=62.9
Q ss_pred ccceeeecCcCccCCCCCCccccCc--eeEEEecccccc---------------------ccccccccCCCCC-CeEEEE
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGP--ISASKNSTASLN---------------------SCLPGERLDHYTT-ESFVHV 70 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~--v~~~i~~~~~~~---------------------~~~~~~~~~~~~l-~~f~hv 70 (782)
..++++.||+..++. +. ..... +++||||||..+ +..+.+.+...+. ++|||+
T Consensus 77 ~~v~~~~~Dl~d~~~-~~--~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~ 153 (404)
T 1i24_A 77 KSIELYVGDICDFEF-LA--ESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKL 153 (404)
T ss_dssp CCCEEEESCTTSHHH-HH--HHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CceEEEECCCCCHHH-HH--HHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 367889999986642 11 11222 899999998521 1112222221123 599999
Q ss_pred ecccccCCCC-CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeC
Q psy16243 71 STAYSNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVR 147 (782)
Q Consensus 71 sta~~~~~~~-~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivR 147 (782)
||+...+... .++|+.+....+ ......+ ......+.|..+|..+|.++... ..+.+++++|
T Consensus 154 SS~~vyg~~~~~~~E~~~~~~~~--------------~~~~~~~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivr 218 (404)
T 1i24_A 154 GTMGEYGTPNIDIEEGYITITHN--------------GRTDTLP-YPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLN 218 (404)
T ss_dssp CCGGGGCCCSSCBCSSEEEEEET--------------TEEEEEE-CCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CcHHHhCCCCCCCCccccccccc--------------ccccccc-CCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 9986654321 122221110000 0000000 00011245888999999887642 1256788999
Q ss_pred CCcccc
Q psy16243 148 PSIDLG 153 (782)
Q Consensus 148 ps~~~~ 153 (782)
|..+.+
T Consensus 219 p~~v~G 224 (404)
T 1i24_A 219 QGVVYG 224 (404)
T ss_dssp ECEEEC
T ss_pred cceeeC
Confidence 887754
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=80.49 E-value=0.82 Score=48.16 Aligned_cols=104 Identities=9% Similarity=-0.093 Sum_probs=58.4
Q ss_pred cceeeecCcCccCCCCCCcccc-CceeEEEecccccc-----------------ccccccccCCC-----CCCeEEEEec
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKS-GPISASKNSTASLN-----------------SCLPGERLDHY-----TTESFVHVST 72 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~-~~v~~~i~~~~~~~-----------------~~~~~~~~~~~-----~l~~f~hvst 72 (782)
++..+.||+..++. +. ... ..+++|||+|+... +..+.+.+... ..++|||+||
T Consensus 65 ~~~~~~~Dl~d~~~-~~--~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS 141 (342)
T 2hrz_A 65 AVDARAADLSAPGE-AE--KLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSS 141 (342)
T ss_dssp EEEEEECCTTSTTH-HH--HHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred ceeEEEcCCCCHHH-HH--HHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCc
Confidence 46678899887643 11 112 36899999999521 22222222211 2689999999
Q ss_pred ccccCCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhc--CCCCeEEEeCC
Q psy16243 73 AYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRP 148 (782)
Q Consensus 73 a~~~~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~--~~~~~~~ivRp 148 (782)
........ .++|+- | ....+.|..+|..+|.+.... ......+++|+
T Consensus 142 ~~~~~~~~~~~~~E~~--------------------------~---~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~ 192 (342)
T 2hrz_A 142 IAVFGAPLPYPIPDEF--------------------------H---TTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRL 192 (342)
T ss_dssp GGGCCSSCCSSBCTTC--------------------------C---CCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEE
T ss_pred hHhhCCCCCCCcCCCC--------------------------C---CCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEe
Confidence 87654321 111110 0 001234889999999987652 22345566675
Q ss_pred Ccc
Q psy16243 149 SID 151 (782)
Q Consensus 149 s~~ 151 (782)
..+
T Consensus 193 ~~v 195 (342)
T 2hrz_A 193 PTI 195 (342)
T ss_dssp CEE
T ss_pred eeE
Confidence 544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 782 | ||||
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 2e-09 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 3e-05 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 8e-05 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 7e-04 |
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.4 bits (138), Expect = 2e-09
Identities = 41/286 (14%), Positives = 78/286 (27%), Gaps = 59/286 (20%)
Query: 273 INSEDRQTLVDNIHVVFHCAATV---RFDAHLKVAVSINLRATKALLEMAKEMKQLKSFV 329
IN + + L + ++H A+ + + + N T +L +AK + +
Sbjct: 54 INHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARLL 111
Query: 330 HVSTA---YSNCRQPIIEERFYE-PPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYA 385
ST+ P E+ + P+ P Y
Sbjct: 112 LASTSEVYGDPEVHPQSEDYWGHVNPIGPR--------------------------ACYD 145
Query: 386 LTKQVAEDMVR--RGGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGW 443
K+VAE M G+ V + R N +GP + + + +
Sbjct: 146 EGKRVAETMCYAYMKQEGVEVRVARIF---------------NTFGPRMHMNDGRVVSNF 190
Query: 444 INN-HYGPTGIVAGAGLGLLRSMHAD-----PELVADMVPADNVINCIISAAWNVHQTWN 497
I G V G+G + + + + V +
Sbjct: 191 ILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQL 250
Query: 498 EKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNE 543
K G DD + + + + W+ + L E
Sbjct: 251 IKNLVGSGSEIQFLSEAQDDPQKRKPD-IKKAKLMLGWEPVVPLEE 295
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 44.4 bits (104), Expect = 3e-05
Identities = 37/175 (21%), Positives = 56/175 (32%), Gaps = 42/175 (24%)
Query: 284 NIHVVFHCAATVRFDAHLK---VAVSINLRATKALLEMAKEM--------KQLKSFVHVS 332
V H AA D + + N+ T ALLE+A++ K F H+S
Sbjct: 73 QPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIS 132
Query: 333 T--AYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390
T Y + P E P+ +P Y+ +K
Sbjct: 133 TDEVYGDLPHPDEVENSVTLPLFTE----------TTAYAPSSP---------YSASKAS 173
Query: 391 AEDMVR--RGGAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVI--ATNKEPIP 441
++ +VR R G+P + S P P VI A +P+P
Sbjct: 174 SDHLVRAWRRTYGLPTIVTNCSNNYG------PYHFPEKLIPLVILNALEGKPLP 222
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 42.9 bits (100), Expect = 8e-05
Identities = 34/278 (12%), Positives = 76/278 (27%), Gaps = 45/278 (16%)
Query: 283 DNIHVVFHCAATV----RFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTA---Y 335
+ I V+ AA V + + + N+ ++ A + + + + ++
Sbjct: 53 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYP 111
Query: 336 SNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395
+QP+ E + + P + YA+ K +
Sbjct: 112 KLAKQPMAESELLQGTLEPTN-------------------------EPYAIAKIAGIKLC 146
Query: 396 R--RGGAGMPVAMVRPSIVIATNKEP-------IPGWINNHYGPTVIATNKEPIPGWINN 446
G V P+ + + IP + + T + G
Sbjct: 147 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTP 206
Query: 447 HYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNE-KKAAGKL 505
+ A + A + + P + IN + + K G
Sbjct: 207 MREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYK 266
Query: 506 VADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNE 543
D + PD T ++ + + + W ++L
Sbjct: 267 GRVVFDASKPDGTPRKLLD--VTRLHQLGWYHEISLEA 302
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 40.2 bits (93), Expect = 7e-04
Identities = 22/153 (14%), Positives = 38/153 (24%), Gaps = 46/153 (30%)
Query: 282 VDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKE--MKQLKSFVHVSTAYSNCR 339
D ++ + + + ++ T LLE + +++ F ST+
Sbjct: 79 PDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTS----- 133
Query: 340 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR--R 397
E + P E +P YA+ K A + R
Sbjct: 134 -----ELYGLVQEIP-----QKE---TTPFYPRSP---------YAVAKLYAYWITVNYR 171
Query: 398 GGAGMPVAMVRPSIVIATNKEPIPGWINNHYGP 430
GM NH P
Sbjct: 172 ESYGMYACNGILF---------------NHESP 189
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 782 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.94 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.91 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.9 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.9 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.9 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.9 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.89 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.89 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.89 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.89 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.88 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.88 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.88 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.86 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.85 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.85 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.83 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.82 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.81 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.77 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.72 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.61 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.6 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.58 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.57 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.56 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.51 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.48 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.48 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.24 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.77 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.77 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.75 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 98.72 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.69 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 98.69 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.68 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.65 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.64 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.61 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.6 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.6 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.59 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.58 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.58 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 98.57 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 98.57 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.57 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.55 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.54 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 98.54 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.54 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.54 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.53 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.52 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.51 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.5 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.49 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.48 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.47 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.47 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.47 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.46 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.45 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.44 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.43 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.42 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.4 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 98.38 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.37 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.34 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.32 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.32 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.31 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.3 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.27 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.26 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.23 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.21 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.2 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.05 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.05 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.05 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 97.93 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 97.89 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 97.88 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 97.8 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 97.69 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 97.61 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 97.55 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 97.17 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 97.1 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 96.68 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 96.61 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 95.45 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 94.88 | |
| d2gdwa1 | 76 | Peptidyl carrier protein (PCP), thioester domain { | 94.44 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 94.38 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 94.03 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 91.98 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 91.65 | |
| d2af8a_ | 86 | Actinorhodin polyketide synthase acyl carrier prot | 91.32 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 89.23 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 88.69 | |
| d1nq4a_ | 95 | Oxytetracycline polyketide synthase acyl carrier { | 86.7 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 86.63 | |
| d1vkua_ | 85 | Acyl carrier protein {Thermotoga maritima [TaxId: | 86.49 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 85.66 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 85.54 | |
| d1or5a_ | 82 | Frenolicin polyketide synthase acyl carrier protei | 84.52 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 83.43 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 82.7 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 81.66 | |
| d2jq4a1 | 83 | Hypothetical protein Atu2571 {Agrobacterium tumefa | 81.52 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 81.03 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 80.39 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=7.3e-27 Score=253.96 Aligned_cols=258 Identities=14% Similarity=0.035 Sum_probs=179.9
Q ss_pred CCeeEeeccccCCCCCCChhh-HHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 174 SKMVAVTGDCLKPGVGINSED-RQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~-~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.|+++||| |+|+.|.. .+.|++ .+.+|+++.|...... .+++..+... .
T Consensus 1 ~K~vLITG-----atGfiGs~lv~~Ll~---------------~g~~V~~~~r~~~~~~-~~~~~~~~~~---------~ 50 (357)
T d1db3a_ 1 SKVALITG-----VTGQDGSYLAEFLLE---------------KGYEVHGIKRRASSFN-TERVDHIYQD---------P 50 (357)
T ss_dssp CCEEEEET-----TTSHHHHHHHHHHHH---------------TTCEEEEECC---------------------------
T ss_pred CCEEEEeC-----CCcHHHHHHHHHHHH---------------CcCEEEEEECCCcccc-hhhHHHHHhh---------h
Confidence 48899999 55654421 233332 2578899998643221 1233322211 1
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcCc--eEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHcc--CC
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNI--HVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMK--QL 325 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~v--diViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~--~~ 325 (782)
.....+++++.||+++. ++++++++++ |+|+|+||..... ++....+++|+.||.+|+++|++.+ +.
T Consensus 51 ~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~ 124 (357)
T d1db3a_ 51 HTCNPKFHLHYGDLSDT------SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKK 124 (357)
T ss_dssp ----CCEEECCCCSSCH------HHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTT
T ss_pred hhcCCCeEEEEeecCCH------HHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 12345899999999988 8899999865 9999999986543 4556788999999999999999862 44
Q ss_pred ceEEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CC
Q psy16243 326 KSFVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AG 401 (782)
Q Consensus 326 ~~fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~g 401 (782)
++|||+||++|||.+. ++.|+... . +.+.|+.||+++|.++..+. .+
T Consensus 125 ~r~i~~SS~~vYG~~~~~~~~E~~~~--------------------------~---P~~~Y~~sK~~~E~~~~~~~~~~~ 175 (357)
T d1db3a_ 125 TRFYQASTSELYGLVQEIPQKETTPF--------------------------Y---PRSPYAVAKLYAYWITVNYRESYG 175 (357)
T ss_dssp CEEEEEEEGGGGTTCCSSSBCTTSCC--------------------------C---CCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred cEEEEEEchhhhCCCCCCCcCCCCCC--------------------------C---CCChHHHHHHHHHHHHHHHHHHhC
Confidence 5799999999998643 56665211 1 12789999999999999883 38
Q ss_pred CcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCce-eeeccCCCccccccchhH
Q psy16243 402 MPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLL-RSMHADPELVADMVPADN 480 (782)
Q Consensus 402 lp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~VpVDd 480 (782)
++++++||++||||...+.. .. ......+.....|.. ....|+++..+|++||+|
T Consensus 176 l~~~ilR~~~vyGp~~~~~~---------------------~~---~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D 231 (357)
T d1db3a_ 176 MYACNGILFNHESPRRGETF---------------------VT---RKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD 231 (357)
T ss_dssp CCEEEEEECCEECTTSCTTS---------------------HH---HHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHH
T ss_pred CCEEEEEeccccCCCCCcCC---------------------Cc---hHHHHHHHHHHhCCCceEEECCCCeeecceeech
Confidence 99999999999998643211 00 011134444445543 446688999999999999
Q ss_pred HHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 481 VINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 481 va~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
+|++++.++.. ..+++||++++ .++|+.|+++.+.+.++.
T Consensus 232 ~~~a~~~~~~~--------------------------~~~~~yni~sg--~~~s~~~~~~~~~~~~g~ 271 (357)
T d1db3a_ 232 YVKMQWMMLQQ--------------------------EQPEDFVIATG--VQYSVRQFVEMAAAQLGI 271 (357)
T ss_dssp HHHHHHHTTSS--------------------------SSCCCEEECCC--CCEEHHHHHHHHHHTTTE
T ss_pred HHHHHHHHHhC--------------------------CCCCeEEECCC--CceehHHHHHHHHHHhCC
Confidence 99999988754 23578999999 899999999999998774
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.91 E-value=9.9e-25 Score=235.21 Aligned_cols=311 Identities=18% Similarity=0.145 Sum_probs=211.9
Q ss_pred CCCeeEeeccccCCCCCCChhh-HHhhhccceeEEeeceeeeecccceeeeeecccch-hhHHHHHHHhhcccccccccc
Q psy16243 173 LSKMVAVTGDCLKPGVGINSED-RQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRAT-KALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~-~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~-~~~~erl~~~~~~~~f~~l~~ 250 (782)
..|+++||| |+|+.|+. .+.|.+ .+.+|+++.|...+ ....+.++.....
T Consensus 15 ~~k~iLVTG-----~tGfIGs~lv~~L~~---------------~g~~V~~~d~~~~~~~~~~~~~~~~~~~-------- 66 (341)
T d1sb8a_ 15 QPKVWLITG-----VAGFIGSNLLETLLK---------------LDQKVVGLDNFATGHQRNLDEVRSLVSE-------- 66 (341)
T ss_dssp SCCEEEEET-----TTSHHHHHHHHHHHH---------------TTCEEEEEECCSSCCHHHHHHHHHHSCH--------
T ss_pred CCCEEEEec-----CCCHHHHHHHHHHHH---------------CcCEEEEEECCCCcchhhHHHHHHhhhh--------
Confidence 357899999 56664421 233322 26788988875432 2223333332211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCce
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKS 327 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~ 327 (782)
....++.++.+|+.+. ..........+.|+|+||..... ......+++|+.||.+|+++|++. ++++
T Consensus 67 ---~~~~~~~~~~~d~~d~------~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~ 136 (341)
T d1sb8a_ 67 ---KQWSNFKFIQGDIRNL------DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQS 136 (341)
T ss_dssp ---HHHTTEEEEECCTTSH------HHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSE
T ss_pred ---cccCCeeEEeeccccc------cccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCce
Confidence 1245889999999887 67777778889999999876543 344568899999999999999998 7899
Q ss_pred EEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCc
Q psy16243 328 FVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMP 403 (782)
Q Consensus 328 fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp 403 (782)
|||+||+++||... ++.|+.. .. +.+.|+.||.++|+++..+. .+++
T Consensus 137 ~i~~SS~~vyg~~~~~~~~E~~~--------------------------~~---p~~~Y~~sK~~~E~~~~~~~~~~~i~ 187 (341)
T d1sb8a_ 137 FTYAASSSTYGDHPGLPKVEDTI--------------------------GK---PLSPYAVTKYVNELYADVFSRCYGFS 187 (341)
T ss_dssp EEEEEEGGGGTTCCCSSBCTTCC--------------------------CC---CCSHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred EEEcccceeeCCCCCCCccCCCC--------------------------CC---CCCcchHHHHHHHHHHHHHHHHhCCC
Confidence 99999999998654 4555521 11 12899999999999998873 4899
Q ss_pred EEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHH
Q psy16243 404 VAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVIN 483 (782)
Q Consensus 404 ~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~ 483 (782)
++|+||++|||+...|.. . ... -...++..+..|....+.+++...+|++||+|++.
T Consensus 188 ~~ilR~~~v~G~~~~~~~--------------------~-~~~--~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~ 244 (341)
T d1sb8a_ 188 TIGLRYFNVFGRRQDPNG--------------------A-YAA--VIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ 244 (341)
T ss_dssp CEEEEECCEECTTCCCCS--------------------T-TCC--HHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred eEEEEeceeeccCcCCCC--------------------c-hhh--hHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccch
Confidence 999999999998765422 1 000 11235566677887788899999999999999999
Q ss_pred HHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCcceeceeeEec
Q psy16243 484 CIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLN 563 (782)
Q Consensus 484 aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~~~~~~~~~~~ 563 (782)
++..++.... ...+.+||++++ +++|+.|+++.+.+..+................
T Consensus 245 a~~~~~~~~~-----------------------~~~~~~~~~~~~--~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~ 299 (341)
T d1sb8a_ 245 ANLLAATAGL-----------------------DARNQVYNIAVG--GRTSLNQLFFALRDGLAENGVSYHREPVYRDFR 299 (341)
T ss_dssp HHHHHHTCCG-----------------------GGCSEEEEESCS--CCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCC
T ss_pred hhhhhhhccc-----------------------cccceeeeeccc--ccchHHHHHHHHHHHhccccccccccccccCCC
Confidence 9888775431 134689999998 899999999999998775543222111111010
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhh
Q psy16243 564 KYKSIHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSE 609 (782)
Q Consensus 564 ~~~~~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~ 609 (782)
.....+ .. ....++.+.+||+|+. .+-+-|.++++
T Consensus 300 ~~~~~~--------~~--~d~~k~~~~LGw~p~~-sl~~gi~~ti~ 334 (341)
T d1sb8a_ 300 EGDVRH--------SL--ADISKAAKLLGYAPKY-DVSAGVALAMP 334 (341)
T ss_dssp TTCCSB--------CC--BCCHHHHHHTCCCCCC-CHHHHHHHHHH
T ss_pred CCCcCe--------ee--eCHHHHHHHHCCCcCC-CHHHHHHHHHH
Confidence 000000 00 1235678889999975 34444444443
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=2.3e-23 Score=224.25 Aligned_cols=259 Identities=15% Similarity=0.038 Sum_probs=175.4
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCchh---hHHHHHHhhHHHHHHHHHHHHHccCCceEEEE
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFDA---HLKVAVSINLRATKALLEMAKEMKQLKSFVHV 331 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~v 331 (782)
.++.++.+|+++. +.+.++++ ++|+|||+||...... ...+.+++|+.||++++++|++. ++++|||+
T Consensus 50 ~~~~~~~~Dl~d~------~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~ 122 (338)
T d1udca_ 50 KHPTFVEGDIRNE------ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFS 122 (338)
T ss_dssp SCCEEEECCTTCH------HHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred CCCEEEEeecCCH------HHHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEec
Confidence 4789999999998 88888887 6899999999765443 44578999999999999999998 89999999
Q ss_pred ecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---CCCCcEEE
Q psy16243 332 STAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG---GAGMPVAM 406 (782)
Q Consensus 332 ST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~---~~glp~~I 406 (782)
||..+|+... ...|+.. +. .+.+.|+.+|..+|.++..+ ..+++++|
T Consensus 123 Ss~~vy~~~~~~~~~e~~~-------------------------~~---~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~i 174 (338)
T d1udca_ 123 SSATVYGDQPKIPYVESFP-------------------------TG---TPQSPYGKSKLMVEQILTDLQKAQPDWSIAL 174 (338)
T ss_dssp EEGGGGCSCCSSSBCTTSC-------------------------CC---CCSSHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred CcceEEccccccccccccc-------------------------cC---CCcchHHHHHhhhhHHHHHHHhhccCCeEEE
Confidence 9999997643 2222210 00 12278999999999999865 35899999
Q ss_pred ecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchh-hHHHHhh-cCceeeecc------CCCccccccch
Q psy16243 407 VRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPT-GIVAGAG-LGLLRSMHA------DPELVADMVPA 478 (782)
Q Consensus 407 vRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~-~~~~~~~-~g~~~~~~~------~~~~~~d~VpV 478 (782)
+||+++|||...+.-|. . .|.. ..... .++..+. .+....+.| ++.+.+||++|
T Consensus 175 lR~~~v~G~~~~~~~~~-----~------------~~~~-~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v 236 (338)
T d1udca_ 175 LRYFNPVGAHPSGDMGE-----D------------PQGI-PNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV 236 (338)
T ss_dssp EEECEEECCCTTSSSCC-----C------------CCSS-CCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEH
T ss_pred EeeccEEeccCCCCCCC-----C------------cccc-HHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEE
Confidence 99999999876543310 0 0100 00111 1222222 223333444 47788999999
Q ss_pred hHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCcceece
Q psy16243 479 DNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAY 558 (782)
Q Consensus 479 Ddva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~~~~~~ 558 (782)
+|++.++..+...... ...+++||++++ +++++.|+++.+.+..+...... ..+
T Consensus 237 ~D~~~~~~~~~~~~~~----------------------~~~~~i~Ni~~~--~~~si~e~~~~i~~~~g~~~~~~--~~~ 290 (338)
T d1udca_ 237 MDLADGHVVAMEKLAN----------------------KPGVHIYNLGAG--VGNSVLDVVNAFSKACGKPVNYH--FAP 290 (338)
T ss_dssp HHHHHHHHHHHHHHTT----------------------CCEEEEEEESCS--SCEEHHHHHHHHHHHHTSCCCEE--EEC
T ss_pred eehhhhcccccccccc----------------------ccCcceeeecCC--CCCcHHHHHHHHHHHHCCCCceE--ECC
Confidence 9999988777754321 245689999998 89999999999999877432211 111
Q ss_pred eeEeccchHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHh
Q psy16243 559 CFTLNKYKSIHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFS 608 (782)
Q Consensus 559 ~~~~~~~~~~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~ 608 (782)
.. .....+. ..-.+++++.+||+|.. .+.+-|.+++
T Consensus 291 ~~---~~~~~~~----------~~d~~k~~~~lgwkp~~-~l~egi~~ti 326 (338)
T d1udca_ 291 RR---EGDLPAY----------WADASKADRELNWRVTR-TLDEMAQDTW 326 (338)
T ss_dssp CC---TTCCSBC----------CBCCHHHHHHHCCCCCC-CHHHHHHHHH
T ss_pred CC---CCCCCEe----------eECHHHHHHHHCCCcCC-CHHHHHHHHH
Confidence 10 0000000 01235778889999964 4555555554
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.90 E-value=3.3e-24 Score=233.18 Aligned_cols=213 Identities=17% Similarity=0.104 Sum_probs=162.6
Q ss_pred ccceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCchh---hHHHHHHhhHHHHHHHHHHHHHcc-------
Q psy16243 256 LSKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFDA---HLKVAVSINLRATKALLEMAKEMK------- 323 (782)
Q Consensus 256 ~~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~Lle~a~~~~------- 323 (782)
..+++++.+|++++ ..+..++++ +|+||||||...... .....+++|+.||.+++++|++.+
T Consensus 49 ~~~~~~~~~Dl~d~------~~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~ 122 (361)
T d1kewa_ 49 SNRYNFEHADICDS------AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDK 122 (361)
T ss_dssp CTTEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHH
T ss_pred cCCcEEEEccCCCH------HHHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 35899999999998 788888774 799999999865433 334688999999999999998762
Q ss_pred -CCceEEEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--
Q psy16243 324 -QLKSFVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-- 398 (782)
Q Consensus 324 -~~~~fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-- 398 (782)
+.++|||+||..+||... ...|.....|...+ ..+. .+.+.||.||.++|.++..+
T Consensus 123 ~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e----------------~~~~---~p~s~Yg~sK~~~E~~~~~~~~ 183 (361)
T d1kewa_ 123 KNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE----------------TTAY---APSSPYSASKASSDHLVRAWRR 183 (361)
T ss_dssp HHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT----------------TSCC---CCCSHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEeccceeeCCCccCCccccccCCCCccc----------------CCCC---CCCCHHHHHHHHHHHHHHHHHH
Confidence 356999999999999754 22222221111110 0111 12278999999999999987
Q ss_pred CCCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccch
Q psy16243 399 GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPA 478 (782)
Q Consensus 399 ~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpV 478 (782)
..+++++++||++||||...+ +. -...++..+..|....+.++|++.+||+||
T Consensus 184 ~~~i~~~~lR~~~vyGp~~~~-------------------------~~--~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v 236 (361)
T d1kewa_ 184 TYGLPTIVTNCSNNYGPYHFP-------------------------EK--LIPLVILNALEGKPLPIYGKGDQIRDWLYV 236 (361)
T ss_dssp HHCCCEEEEEECEEESTTCCT-------------------------TS--HHHHHHHHHHHTCCEEEETTSCCEEEEEEH
T ss_pred HhCCCEEEEecCceECcCCCc-------------------------Cc--HHHHHHHHHHcCCCcEEeCCCCeEEeCEEH
Confidence 348999999999999975432 11 112567777888877788999999999999
Q ss_pred hHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccc
Q psy16243 479 DNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVP 547 (782)
Q Consensus 479 Ddva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~ 547 (782)
+|+|++++.++... ..+++||++++ +++++.|+++.+.+.++
T Consensus 237 ~D~a~ai~~~~~~~-------------------------~~~~~~Ni~s~--~~~s~~~~~~~i~~~~~ 278 (361)
T d1kewa_ 237 EDHARALHMVVTEG-------------------------KAGETYNIGGH--NEKKNLDVVFTICDLLD 278 (361)
T ss_dssp HHHHHHHHHHHHHC-------------------------CTTCEEEECCC--CEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-------------------------CCCCeEEECCC--CCcchHHHHhHhhhhcc
Confidence 99999999998753 34679999999 89999999999987654
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=4.3e-24 Score=227.52 Aligned_cols=203 Identities=16% Similarity=0.110 Sum_probs=155.9
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.++....+|+.+. ++.++|+|||+||.+... ....+.+++|+.||.+|+++|++. ++ +|||+||
T Consensus 49 ~~~d~~~~~~~~~-----------~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS 115 (312)
T d2b69a1 49 ENFELINHDVVEP-----------LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLAST 115 (312)
T ss_dssp TTEEEEECCTTSC-----------CCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEE
T ss_pred CceEEEehHHHHH-----------HHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEC
Confidence 3566777776654 345799999999986543 345678899999999999999987 44 8999999
Q ss_pred ceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEecC
Q psy16243 334 AYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRP 409 (782)
Q Consensus 334 ~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvRp 409 (782)
.+||+... ++.|+.... .+|..+ -+.||.||.++|.++..+. .|++++++||
T Consensus 116 ~~vy~~~~~~~~~e~~~~~---------------------~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~ 171 (312)
T d2b69a1 116 SEVYGDPEVHPQSEDYWGH---------------------VNPIGP---RACYDEGKRVAETMCYAYMKQEGVEVRVARI 171 (312)
T ss_dssp GGGGBSCSSSSBCTTCCCB---------------------CCSSST---THHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred hheecCCCCCCCCccccCC---------------------CCCCCC---ccHHHHHHHHHHHHHHHHHHHhCCcEEEEEe
Confidence 99998753 455543221 011111 2789999999999998873 4899999999
Q ss_pred CeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhh
Q psy16243 410 SIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAA 489 (782)
Q Consensus 410 ~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~ 489 (782)
++||||...+..+ . ....++..+..|....+++++...+|++||+|++++++.++
T Consensus 172 ~~vyGp~~~~~~~-------------------~------~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~ 226 (312)
T d2b69a1 172 FNTFGPRMHMNDG-------------------R------VVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM 226 (312)
T ss_dssp CCEECTTCCTTCC-------------------C------HHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHH
T ss_pred eeEECCCCCCCCc-------------------c------HHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHH
Confidence 9999986543210 1 11246677788888888899999999999999999998887
Q ss_pred hhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 490 WNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
.. ...++||++++ .++++.++++.+.+.++..
T Consensus 227 ~~--------------------------~~~~~~n~~~~--~~~~~~~~~~~i~~~~~~~ 258 (312)
T d2b69a1 227 NS--------------------------NVSSPVNLGNP--EEHTILEFAQLIKNLVGSG 258 (312)
T ss_dssp TS--------------------------SCCSCEEESCC--CEEEHHHHHHHHHHHHTCC
T ss_pred hh--------------------------ccCCceEecCC--cccchhhHHHHHHHHhCCC
Confidence 53 23568999999 9999999999999988754
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=6.7e-23 Score=221.31 Aligned_cols=273 Identities=16% Similarity=0.067 Sum_probs=177.7
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEE
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHV 331 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~v 331 (782)
.+++++.+|+++. ++++.+++ ++|+|||+||..... +....+..+|+.||.+++++|++. ++++|||+
T Consensus 51 ~~v~~~~~Dl~d~------~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~ 123 (347)
T d1z45a2 51 HHIPFYEVDLCDR------KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFS 123 (347)
T ss_dssp SCCCEEECCTTCH------HHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred cCCeEEEeecCCH------HHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEee
Confidence 4789999999987 88888776 689999999986533 334567889999999999999997 89999999
Q ss_pred ecceeccCCCc------ccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----CCC
Q psy16243 332 STAYSNCRQPI------IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG----GAG 401 (782)
Q Consensus 332 ST~~v~~~~~~------i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~----~~g 401 (782)
||..|||.... ++|+ .+. .+.+.||.||.++|+++..+ ..+
T Consensus 124 SS~~vyg~~~~~~~~~~~~e~--------------------------~~~---~p~~~Y~~sK~~~E~~~~~~~~~~~~~ 174 (347)
T d1z45a2 124 SSATVYGDATRFPNMIPIPEE--------------------------CPL---GPTNPYGHTKYAIENILNDLYNSDKKS 174 (347)
T ss_dssp EEGGGGCCGGGSTTCCSBCTT--------------------------SCC---CCCSHHHHHHHHHHHHHHHHHHHSTTS
T ss_pred cceeeecCcccCCCCCccccc--------------------------cCC---CCCChhHhHHHHHHHHHHHHHHhhccC
Confidence 99999986431 2221 111 22388999999999999876 358
Q ss_pred CcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhh--cCceeeeccC------CCccc
Q psy16243 402 MPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAG--LGLLRSMHAD------PELVA 473 (782)
Q Consensus 402 lp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~--~g~~~~~~~~------~~~~~ 473 (782)
++++++||+++||+...+..| + +...........+.... .+....+.|+ +....
T Consensus 175 ~~~~~lR~~~v~g~~~~~~~g-------~-----------~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~ 236 (347)
T d1z45a2 175 WKFAILRYFNPIGAHPSGLIG-------E-----------DPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIR 236 (347)
T ss_dssp CEEEEEEECEEECCCTTSSCC-------C-----------CCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEE
T ss_pred CcEEEEeecceEeecCCCccC-------C-----------CccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceee
Confidence 999999999999986544331 1 11111111112222222 2333334444 44667
Q ss_pred cccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCc
Q psy16243 474 DMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTF 553 (782)
Q Consensus 474 d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~ 553 (782)
|++++.+++.+++.++...... .......++||++++ +++|+.|+++.+.+..+......
T Consensus 237 d~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~Ni~~~--~~~s~~e~~~~i~~~~~~~~~~~ 296 (347)
T d1z45a2 237 DYIHVVDLAKGHIAALQYLEAY------------------NENEGLCREWNLGSG--KGSTVFEVYHAFCKASGIDLPYK 296 (347)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHS------------------CTTCCEEEEEEESCS--CCEEHHHHHHHHHHHHTCCCCC-
T ss_pred eeeeeecccccccccccccccc------------------cccccccccceecCC--CcccHHHHHHHHHHHHCCCCceE
Confidence 7888888888888877543211 001245789999999 89999999999999877543211
Q ss_pred ceeceeeEeccchHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhcccccccccc
Q psy16243 554 AIWAYCFTLNKYKSIHKLYILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQQFTFT 622 (782)
Q Consensus 554 ~~~~~~~~~~~~~~~~~l~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~~~~~f~~~~w~f~ 622 (782)
...... +..+ ++ ..-.+++++.+||+|+. .+-+-+.++ ++||..|.|.|+
T Consensus 297 ~~~~~~---------~~~~----~~--~~d~sk~~~~lGw~p~~-~lee~i~~t---i~w~~~np~~~~ 346 (347)
T d1z45a2 297 VTGRRA---------GDVL----NL--TAKPDRAKRELKWQTEL-QVEDSCKDL---WKWTTENPFGYQ 346 (347)
T ss_dssp -----------------CC----CC--CBCCHHHHHHTCCCCCC-CHHHHHHHH---HHHHHHCTTCSC
T ss_pred eCCCCC---------CCCC----Ee--eECHHHHHHHHCCCCCC-CHHHHHHHH---HHHHHhChhcCc
Confidence 111000 0000 00 01236788899999963 344444444 456777766653
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.89 E-value=2.2e-23 Score=222.75 Aligned_cols=204 Identities=19% Similarity=0.111 Sum_probs=165.9
Q ss_pred ccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchh---hHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 256 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDA---HLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 256 ~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
..++.++.+|+++. ..........|+|+|+|+...... ...+.+++|+.||.+++++|.+. ++++|||+|
T Consensus 54 ~~~~~~~~~d~~~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~S 126 (322)
T d1r6da_ 54 DPRLRFVHGDIRDA------GLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVS 126 (322)
T ss_dssp CTTEEEEECCTTCH------HHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred CCCeEEEEeccccc------hhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEee
Confidence 35899999999987 777778888999999998765433 34467889999999999999997 789999999
Q ss_pred cceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEec
Q psy16243 333 TAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVR 408 (782)
Q Consensus 333 T~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvR 408 (782)
|+++||... ++.|+. |..+ .+.||.||..+|.++..+. .+++++++|
T Consensus 127 s~~~yg~~~~~~~~E~~--------------------------~~~p---~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR 177 (322)
T d1r6da_ 127 TNQVYGSIDSGSWTESS--------------------------PLEP---NSPYAASKAGSDLVARAYHRTYGLDVRITR 177 (322)
T ss_dssp EGGGGCCCSSSCBCTTS--------------------------CCCC---CSHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cceeecCCCCCCCCCCC--------------------------CCCC---CCHHHHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 999998754 455552 1111 2789999999999999873 489999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
|++||||.+.+.. ....++..+..|....+.+++++.+||+||+|+|++++.+
T Consensus 178 ~~~vyGp~~~~~~---------------------------~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~ 230 (322)
T d1r6da_ 178 CCNNYGPYQHPEK---------------------------LIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALV 230 (322)
T ss_dssp ECEEECTTCCTTS---------------------------HHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHH
T ss_pred eeeEECcCCCcCc---------------------------HHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHH
Confidence 9999998643210 1225667777887777889999999999999999999999
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+.+. ..+++||++++ +++++.|+++.+.+.++..
T Consensus 231 ~~~~-------------------------~~~~~~ni~~~--~~~s~~e~~~~i~~~~~~~ 264 (322)
T d1r6da_ 231 LAGG-------------------------RAGEIYHIGGG--LELTNRELTGILLDSLGAD 264 (322)
T ss_dssp HHHC-------------------------CTTCEEEECCC--CEEEHHHHHHHHHHHHTCC
T ss_pred HhCC-------------------------CCCCeeEEeec--ccchhHHHHHHHHHHhCCC
Confidence 8763 34689999999 9999999999999988754
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=3.8e-23 Score=222.61 Aligned_cols=224 Identities=14% Similarity=0.094 Sum_probs=163.3
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhh---HHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAH---LKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~---~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
++++++.||+++.. +..+.+.+++|+|+|+||....... ....+.+|+.||.+++++|.+. + .+++|+||
T Consensus 45 ~~~~~i~~Di~~~~-----~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~-~~~~~~ss 117 (342)
T d2blla1 45 PHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPST 117 (342)
T ss_dssp TTEEEEECCTTTCS-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECC
T ss_pred CCeEEEECccCChH-----HHHHHHHhCCCccccccccccccccccCCccccccccccccccccccccc-c-cccccccc
Confidence 58999999999872 3344467789999999998764433 3468899999999999999986 4 46678999
Q ss_pred ceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEecC
Q psy16243 334 AYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRP 409 (782)
Q Consensus 334 ~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvRp 409 (782)
+.+|+... ...|.....+.+ . ...+-+.|+.||.++|+++..+. .+++++|+||
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-------------------~---~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~ 175 (342)
T d2blla1 118 SEVYGMCSDKYFDEDHSNLIVG-------------------P---VNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRP 175 (342)
T ss_dssp GGGGBTCCCSSBCTTTCCCBCC-------------------C---TTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred cccccccccccccccccccccc-------------------c---cCCCcchhhhcccchhhhhhhhhcccCceeEEeec
Confidence 99998654 222221110000 0 00111789999999999998883 4899999999
Q ss_pred CeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhh
Q psy16243 410 SIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAA 489 (782)
Q Consensus 410 ~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~ 489 (782)
+.++||...+..| ...........++..+..|....++++++..++++||+|+|+++..++
T Consensus 176 ~~~~g~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~ 236 (342)
T d2blla1 176 FNWMGPRLDNLNA-------------------ARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII 236 (342)
T ss_dssp CSEECSSCCCTTC-------------------SBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHH
T ss_pred ccccccccccccc-------------------ccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeeh
Confidence 9999986544321 111111123356777888988888999999999999999999999998
Q ss_pred hhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCC
Q psy16243 490 WNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPS 551 (782)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~ 551 (782)
..... ...+++||++++. +++|+.|+++.+.+..+..+.
T Consensus 237 ~~~~~----------------------~~~g~~~Nig~~~-~~~t~~~l~~~i~~~~~~~~~ 275 (342)
T d2blla1 237 ENAGN----------------------RCDGEIINIGNPE-NEASIEELGEMLLASFEKHPL 275 (342)
T ss_dssp HCGGG----------------------TTTTEEEEECCTT-SEEEHHHHHHHHHHHHHTCTT
T ss_pred hhccc----------------------cCCCeEEEEeccc-chhHHHHHHHHHHHHhCCCcc
Confidence 75311 2457899998763 468999999999988775543
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.89 E-value=8.5e-23 Score=217.60 Aligned_cols=253 Identities=14% Similarity=0.037 Sum_probs=182.2
Q ss_pred CeeEeeccccCCCCCCChhhH-HhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 175 KMVAVTGDCLKPGVGINSEDR-QTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 175 k~vlvTG~~~~~g~Gl~~~~~-~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
|.|+||| |+|+.|..+ +.|+. .+++|+++.|...... .++++++.
T Consensus 1 k~vLItG-----~tGfiG~~l~~~Ll~---------------~g~~V~~~~r~~~~~~-~~~l~~~~------------- 46 (321)
T d1rpna_ 1 RSALVTG-----ITGQDGAYLAKLLLE---------------KGYRVHGLVARRSSDT-RWRLRELG------------- 46 (321)
T ss_dssp CEEEEET-----TTSHHHHHHHHHHHH---------------TTCEEEEEECCCSSCC-CHHHHHTT-------------
T ss_pred CEEEEEC-----CCCHHHHHHHHHHHH---------------CcCEEEEEECCCCccc-HHHHHHhc-------------
Confidence 6899999 555533222 23322 2678999998754322 23444331
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceE
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSF 328 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~f 328 (782)
...+++++.+|+++. +.+...+.. .++++|+|+..... .+..+.+..|+.||.+++++|++.+..++|
T Consensus 47 -~~~~~~~~~~Dl~d~------~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~ 119 (321)
T d1rpna_ 47 -IEGDIQYEDGDMADA------CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRF 119 (321)
T ss_dssp -CGGGEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEE
T ss_pred -ccCCcEEEEccccCh------HHhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCccc
Confidence 235799999999997 777776664 47899998876544 335678899999999999999998667789
Q ss_pred EEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcE
Q psy16243 329 VHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPV 404 (782)
Q Consensus 329 V~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~ 404 (782)
+++||+.+++... ..+|+. |.. ..+.|+.||.++|.++..+. .++++
T Consensus 120 i~~Ss~~~~~~~~~~~~~E~~--------------------------~~~---p~~~Y~~sK~~~E~~~~~~~~~~~~~~ 170 (321)
T d1rpna_ 120 YQASTSEMFGLIQAERQDENT--------------------------PFY---PRSPYGVAKLYGHWITVNYRESFGLHA 170 (321)
T ss_dssp EEEEEGGGGCSCSSSSBCTTS--------------------------CCC---CCSHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred ccccchhhcCcccCCCCCCCC--------------------------Ccc---ccChhHHHHHHHHHHHHHHHhhcCCcE
Confidence 9999999987643 344431 111 12889999999999998873 58999
Q ss_pred EEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCc-eeeeccCCCccccccchhHHHH
Q psy16243 405 AMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGL-LRSMHADPELVADMVPADNVIN 483 (782)
Q Consensus 405 ~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~d~VpVDdva~ 483 (782)
+++||+++|||...+. +..+ .....+.....|. .....|++++.+||+||+|+|+
T Consensus 171 ~~lr~~~vyGp~~~~~----------------------~~~~--~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~ 226 (321)
T d1rpna_ 171 SSGILFNHESPLRGIE----------------------FVTR--KVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE 226 (321)
T ss_dssp EEEEECCEECTTSCTT----------------------SHHH--HHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHH
T ss_pred EEEEEecccCCCcccc----------------------ccHH--HHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHH
Confidence 9999999999854321 0000 1123444445544 4456789999999999999999
Q ss_pred HHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 484 CIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 484 aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+++.++.+. ..+.||++++ ++.++.++++.+.+..+..
T Consensus 227 ~~~~~~~~~--------------------------~~~~~ni~~~--~~~s~~~~~~~~~~~~~~~ 264 (321)
T d1rpna_ 227 AMWLMLQQD--------------------------KADDYVVATG--VTTTVRDMCQIAFEHVGLD 264 (321)
T ss_dssp HHHHHHHSS--------------------------SCCCEEECCS--CEEEHHHHHHHHHHTTTCC
T ss_pred HHHHHHhcC--------------------------CcCCceeccc--ccceehhhhHHHHHHhCCC
Confidence 999988652 3567999999 8999999999999887643
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.89 E-value=8.5e-23 Score=221.74 Aligned_cols=214 Identities=13% Similarity=0.006 Sum_probs=160.3
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc----hhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF----DAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f----~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
....+..+|+++. +++..+++++|+|+|+|+.... ..........|+.||.+++++|++. ++++|||+|
T Consensus 58 ~~~~~~~~D~~~~------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~S 130 (363)
T d2c5aa1 58 FCDEFHLVDLRVM------ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYAS 130 (363)
T ss_dssp TCSEEEECCTTSH------HHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred ccCcEEEeechhH------HHHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhh-Ccccccccc
Confidence 4567888999887 7888888999999999987655 3455678889999999999999997 899999999
Q ss_pred cceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEec
Q psy16243 333 TAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVR 408 (782)
Q Consensus 333 T~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvR 408 (782)
|+.+++... +.+|..... .+..|. .+.+.||.||.++|.++..+. .|++++++|
T Consensus 131 S~~~~~~~~~~~~~~~~~~~-------------------~e~~~~---~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR 188 (363)
T d2c5aa1 131 SACIYPEFKQLETTNVSLKE-------------------SDAWPA---EPQDAFGLEKLATEELCKHYNKDFGIECRIGR 188 (363)
T ss_dssp EGGGSCGGGSSSSSSCEECG-------------------GGGSSB---CCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred cccccccccccccccccccc-------------------ccCCcC---CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 999998643 222221100 001111 223789999999999998873 489999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHh
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISA 488 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a 488 (782)
|+++||+...+.. .+ ..............+......+++.+.+||+|++|++.++..+
T Consensus 189 ~~~vyG~~~~~~~--------------------~~--~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~ 246 (363)
T d2c5aa1 189 FHNIYGPFGTWKG--------------------GR--EKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRL 246 (363)
T ss_dssp ECCEECTTSCCSS--------------------SC--CCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHH
T ss_pred eeeEeccCCcccc--------------------cc--cccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHH
Confidence 9999998654322 00 0111112333444555566788899999999999999999887
Q ss_pred hhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 489 AWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+.. ..+++||++++ .++++.|+++.+.+..+..
T Consensus 247 ~~~--------------------------~~~~~~ni~~~--~~~s~~~l~~~i~~~~g~~ 279 (363)
T d2c5aa1 247 TKS--------------------------DFREPVNIGSD--EMVSMNEMAEMVLSFEEKK 279 (363)
T ss_dssp HHS--------------------------SCCSCEEECCC--CCEEHHHHHHHHHHTTTCC
T ss_pred HhC--------------------------CCCCeEEEecC--CcccHHHHHHHHHHHhCCC
Confidence 753 24578999999 9999999999999988754
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.88 E-value=1.1e-22 Score=219.47 Aligned_cols=267 Identities=16% Similarity=0.112 Sum_probs=185.5
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchh---hHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDA---HLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
.+++++.||+++. +.+..+++..+.|+|+|+...... +..+.+++|+.||.++++.|... + .++|++||
T Consensus 52 ~~i~~~~~Di~d~------~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~-~k~i~~ss 123 (346)
T d1oc2a_ 52 DRVELVVGDIADA------ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D-IRFHHVST 123 (346)
T ss_dssp SSEEEEECCTTCH------HHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEEE
T ss_pred CCeEEEEccCCCH------HHHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-c-cccccccc
Confidence 5899999999987 889999999999999999876543 33468899999999999999987 3 58999999
Q ss_pred ceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEecCCe
Q psy16243 334 AYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRPSI 411 (782)
Q Consensus 334 ~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvRp~~ 411 (782)
.++||.....++...... .+ .+.....++. .+.+.||.||.++|.++..+. .+++++|+||++
T Consensus 124 ~~vyg~~~~~~~~~~~~~-~~-----------~~~~~e~~~~---~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~ 188 (346)
T d1oc2a_ 124 DEVYGDLPLREDLPGHGE-GP-----------GEKFTAETNY---NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSN 188 (346)
T ss_dssp GGGGCCBCCGGGSTTTTC-ST-----------TSSBCTTSCC---CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred ceEecccCcccccccccc-Cc-----------ccccccCCCC---CCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecc
Confidence 999986432221111100 00 0000111121 223889999999999998873 489999999999
Q ss_pred EEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhh
Q psy16243 412 VIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWN 491 (782)
Q Consensus 412 v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~ 491 (782)
||||...+.. .....+.....|....+.++++..++++|++|+|++++.+..+
T Consensus 189 vyGp~~~~~~---------------------------~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~ 241 (346)
T d1oc2a_ 189 NYGPYQHIEK---------------------------FIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK 241 (346)
T ss_dssp EESTTCCTTS---------------------------HHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHH
T ss_pred eeCCCCCccc---------------------------hhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhh
Confidence 9997543211 1123455566777778889999999999999999999888765
Q ss_pred ccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccCCCcceeceeeEeccchHHHHH
Q psy16243 492 VHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIPSTFAIWAYCFTLNKYKSIHKL 571 (782)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~l 571 (782)
. ..++.||++++ ++.++.++++.+.+..+.................. +
T Consensus 242 ~-------------------------~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~---- 289 (346)
T d1oc2a_ 242 G-------------------------RMGETYLIGAD--GEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLR-Y---- 289 (346)
T ss_dssp C-------------------------CTTCEEEECCS--CEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCB-C----
T ss_pred c-------------------------ccCcccccccc--ccccchHHHHHHHHHhCCCCcceEECCCCCCCCce-e----
Confidence 3 45789999999 89999999999999887643322111110000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhccccc
Q psy16243 572 YILFLHLLPALIVDTAAKLMGRQPKLLDAYQKIHKFSEVISFFSTQ 617 (782)
Q Consensus 572 ~~~~~~~lpa~~~d~~~~l~G~~p~~~k~~~ki~~~~~~~~~f~~~ 617 (782)
..-..++.+.+||+|++..+-+-+.++ ++||..|
T Consensus 290 ---------~~d~~k~~~~LGw~P~~t~l~e~i~~t---i~w~~~n 323 (346)
T d1oc2a_ 290 ---------AIDASKLRDELGWTPQFTDFSEGLEET---IQWYTDN 323 (346)
T ss_dssp ---------CBCCHHHHHHHCCCCSCCCHHHHHHHH---HHHHHHT
T ss_pred ---------eeCHHHHHHHHCCCCcCCCHHHHHHHH---HHHHHHH
Confidence 012467788899999865555555554 3445543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=1e-21 Score=211.72 Aligned_cols=218 Identities=18% Similarity=0.109 Sum_probs=155.7
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCchh---hHHHHHHhhHHHHHHHHHHHHHccCCceEEEE
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFDA---HLKVAVSINLRATKALLEMAKEMKQLKSFVHV 331 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~v 331 (782)
.++.++.+|+++. +.+.+++.+ +++|+|+||...... ...+.+++|+.||.+++++|++. ++++|+|+
T Consensus 58 ~~~~~~~~Dl~d~------~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ 130 (346)
T d1ek6a_ 58 RSVEFEEMDILDQ------GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFS 130 (346)
T ss_dssp CCCEEEECCTTCH------HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CCcEEEEeecccc------ccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Cccccccc
Confidence 5789999999987 778777765 468999999765432 34467899999999999999997 89999999
Q ss_pred ecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---CCCCcEEEec
Q psy16243 332 STAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG---GAGMPVAMVR 408 (782)
Q Consensus 332 ST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~---~~glp~~IvR 408 (782)
||+.+++...........+ .....+.|+.+|..+|+.+..+ ..+++.+++|
T Consensus 131 ss~~~~~~~~~~~~~~~~~--------------------------~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR 184 (346)
T d1ek6a_ 131 SSATVYGNPQYLPLDEAHP--------------------------TGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 184 (346)
T ss_dssp EEGGGGCSCSSSSBCTTSC--------------------------CCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred ccceeeecccccccccccc--------------------------ccccCChHHHHHHHHHHHHHHHHHhccCCceEEEe
Confidence 9999998754221111000 0112278999999999999876 3589999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHH--HhhcCceeeec------cCCCccccccchhH
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVA--GAGLGLLRSMH------ADPELVADMVPADN 480 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~--~~~~g~~~~~~------~~~~~~~d~VpVDd 480 (782)
|+++|||...+..|. ............+. ....+....+. .++.+.+||+||+|
T Consensus 185 ~~~v~G~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D 246 (346)
T d1ek6a_ 185 YFNPTGAHASGCIGE------------------DPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVD 246 (346)
T ss_dssp ECEEECCCTTSSCCC------------------CCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHH
T ss_pred ecceeccCCCCCcCc------------------cccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEe
Confidence 999999876543211 00000011111112 22334333333 34677899999999
Q ss_pred HHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 481 VINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 481 va~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+|.++..++..... ...+++||++++ +++++.|+++.+.+.++..
T Consensus 247 ~a~~~~~~~~~~~~----------------------~~~~~i~Ni~~~--~~~s~~dl~~~i~~~~~~~ 291 (346)
T d1ek6a_ 247 LAKGHIAALRKLKE----------------------QCGCRIYNLGTG--TGYSVLQMVQAMEKASGKK 291 (346)
T ss_dssp HHHHHHHHHHHHTT----------------------TCCEEEEEECCS--CCEEHHHHHHHHHHHHCSC
T ss_pred ccchhhhhcccccc----------------------ccCceEEEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 99998887655321 245789999999 8999999999999998754
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.88 E-value=6.3e-22 Score=213.26 Aligned_cols=278 Identities=18% Similarity=0.099 Sum_probs=181.4
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|.|+|||.+|+.|+.+ .+.|+.. +.+|.+++|..+.. +.++..... +
T Consensus 11 gk~VlVTG~sGfIGs~l----~~~Ll~~---------------G~~V~~~vR~~~~~---~~~~~~~~~----------~ 58 (342)
T d1y1pa1 11 GSLVLVTGANGFVASHV----VEQLLEH---------------GYKVRGTARSASKL---ANLQKRWDA----------K 58 (342)
T ss_dssp TCEEEEETTTSHHHHHH----HHHHHHT---------------TCEEEEEESSHHHH---HHHHHHHHH----------H
T ss_pred cCEEEEECCCCHHHHHH----HHHHHHC---------------cCEEEEEeCCchhH---HHHHHhhhc----------c
Confidence 79999999444444333 2333321 57888999964322 222222111 0
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
........+.+|++++ +.+.+++.++|+|+|+|+...+..+....+.+|+.||.+++++|.+.+++++|||+||
T Consensus 59 ~~~~~~~~~~~Dl~~~------~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS 132 (342)
T d1y1pa1 59 YPGRFETAVVEDMLKQ------GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp STTTEEEEECSCTTST------TTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred ccccccEEEeccccch------hhhhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhccccccccccccc
Confidence 1122345688999988 6788888999999999999988888888899999999999999999878999999999
Q ss_pred ceeccCCCccccccc--CCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----CCCCcEEEe
Q psy16243 334 AYSNCRQPIIEERFY--EPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG----GAGMPVAMV 407 (782)
Q Consensus 334 ~~v~~~~~~i~E~~~--~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~----~~glp~~Iv 407 (782)
..+.+...+..+..+ +...+...+.. ..... ...+ ..+.+.|+.||..+|+++..+ ..++.++++
T Consensus 133 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~~~~-----e~~~---~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i 203 (342)
T d1y1pa1 133 TVSALIPKPNVEGIYLDEKSWNLESIDK-AKTLP-----ESDP---QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAV 203 (342)
T ss_dssp GGGTCCCCTTCCCCEECTTCCCHHHHHH-HHHSC-----TTST---THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEE
T ss_pred ceeeccCCCCCCCccccccccccccccc-ccccc-----ccCC---CCCcCcccchhHhHHHHHHHhhhhccccccccee
Confidence 866543221111111 01111111111 00010 0011 112278999999999988766 357888999
Q ss_pred cCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHH
Q psy16243 408 RPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIIS 487 (782)
Q Consensus 408 Rp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~ 487 (782)
||+.++||...|.. .......++..+..|...... .++...+++||+|+|.+++.
T Consensus 204 ~p~~v~Gp~~~~~~------------------------~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v~Dva~~~i~ 258 (342)
T d1y1pa1 204 LPNYTIGTIFDPET------------------------QSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSAVDIGLLHLG 258 (342)
T ss_dssp EESEEECCCSCTTT------------------------CCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEHHHHHHHHHH
T ss_pred cccceeCCCCCccc------------------------cccchHHHHHHHHcCCcCccc-CCccceeeeeHHHHHHHHHH
Confidence 99999998654322 011122455566666543322 34556799999999999998
Q ss_pred hhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 488 AAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 488 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
++.+. ...+.|+++++ ++++|+|+++.+.+.++...
T Consensus 259 ~l~~~-------------------------~~~g~~~~~~~--~~~t~~eia~~i~k~~p~~~ 294 (342)
T d1y1pa1 259 CLVLP-------------------------QIERRRVYGTA--GTFDWNTVLATFRKLYPSKT 294 (342)
T ss_dssp HHHCT-------------------------TCCSCEEEECC--EEECHHHHHHHHHHHCTTSC
T ss_pred hhcCc-------------------------cccceEEEEcC--CceEHHHHHHHHHHHcCCCc
Confidence 88653 23445667887 88999999999999875443
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.86 E-value=2.1e-21 Score=212.96 Aligned_cols=236 Identities=13% Similarity=0.044 Sum_probs=156.6
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCchh------hHHHHHHhhHHHHHHHHHHHHHccCCceE
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFDA------HLKVAVSINLRATKALLEMAKEMKQLKSF 328 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~~------~~~~~~~~Nv~gt~~Lle~a~~~~~~~~f 328 (782)
.+++++.|||++. +.++.++++ +|+|+|+||...... .....+.+|+.||.+++++|++.+..+.+
T Consensus 67 ~~i~~~~~Dl~d~------~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~ 140 (393)
T d1i24a_ 67 KSIELYVGDICDF------EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHL 140 (393)
T ss_dssp CCCEEEESCTTSH------HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CCcEEEEccCCCH------HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccce
Confidence 5799999999998 888898885 499999999765432 23357889999999999999998666678
Q ss_pred EEEecceeccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEE
Q psy16243 329 VHVSTAYSNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVA 405 (782)
Q Consensus 329 V~vST~~v~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~ 405 (782)
++.||..+++... ...|.......+ ....+...+ ..+.+.|+.||.++|.++..+ ..+++.+
T Consensus 141 i~~ss~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~---~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~ 205 (393)
T d1i24a_ 141 VKLGTMGEYGTPNIDIEEGYITITHN------------GRTDTLPYP---KQASSFYHLSKVHDSHNIAFTCKAWGIRAT 205 (393)
T ss_dssp EEECCGGGGCCCSSCBCSSEEEEEET------------TEEEEEECC---CCCCSHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred eecccccccccccccccccccccccc------------ccccccccc---cccccHHHHHhhhhcccccccccccceeee
Confidence 8888888887543 222221110000 000000011 122378999999999999877 3489999
Q ss_pred EecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHH
Q psy16243 406 MVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCI 485 (782)
Q Consensus 406 IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~ai 485 (782)
++||++||||...+... .+. +.... ...+... .....++.....|....+.|++.+.+||+||+|+++++
T Consensus 206 ~lR~~~v~G~~~~~~~~------~~~-~~~~~--~~~~~~~-~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~ 275 (393)
T d1i24a_ 206 DLNQGVVYGVKTDETEM------HEE-LRNRL--DYDAVFG-TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV 275 (393)
T ss_dssp EEEECEEECSCCTTGGG------SGG-GCCCC--CCSTTTC-CHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred ecccccccCCCcccccc------ccc-ccccc--ccccccc-cchhhhhHHhhcCCeeEEeeecccccccccccchHHHH
Confidence 99999999987644210 000 00000 0000000 01224556677888888889999999999999999999
Q ss_pred HHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 486 ISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 486 i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
+.++.+.. ..+ .|++.++..+++++.++++.+.+..+.
T Consensus 276 ~~~~~~~~------------------------~~g-~~~~~~~~~~~~si~el~~~i~~~~~~ 313 (393)
T d1i24a_ 276 EIAIANPA------------------------KAG-EFRVFNQFTEQFSVNELASLVTKAGSK 313 (393)
T ss_dssp HHHHHSCC------------------------CTT-CEEEEEECSEEEEHHHHHHHHHHHHHT
T ss_pred HHHHHhhc------------------------ccc-eeeeecCCCCeeEHHHHHHHHHHHHHh
Confidence 99987531 222 333322222678999999998886543
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=2.8e-21 Score=208.02 Aligned_cols=208 Identities=12% Similarity=-0.042 Sum_probs=154.4
Q ss_pred ccceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCchh---hHHHHHHhhHHHHHHHHHHHHHcc--CCceE
Q psy16243 256 LSKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFDA---HLKVAVSINLRATKALLEMAKEMK--QLKSF 328 (782)
Q Consensus 256 ~~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~Lle~a~~~~--~~~~f 328 (782)
..+++++.+|++++ +.+..++.+ .++|+|+||...... ....++++|+.||.+++++|++++ +.++|
T Consensus 55 ~~~~~~~~~Dl~d~------~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~ 128 (347)
T d1t2aa_ 55 EGNMKLHYGDLTDS------TCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKF 128 (347)
T ss_dssp --CEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEE
T ss_pred cCCcEEEEeecCCc------hhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEE
Confidence 35899999999998 788888765 479999998765543 344678999999999999999873 34589
Q ss_pred EEEecceeccCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcE
Q psy16243 329 VHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPV 404 (782)
Q Consensus 329 V~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~ 404 (782)
||+||++|||... ++.|+... .+.+.||.||.+||+++..+ ..++++
T Consensus 129 i~~SS~~vyg~~~~~~~~E~~~~-----------------------------~P~~~Yg~sK~~aE~~~~~~~~~~~~~~ 179 (347)
T d1t2aa_ 129 YQASTSELYGKVQEIPQKETTPF-----------------------------YPRSPYGAAKLYAYWIVVNFREAYNLFA 179 (347)
T ss_dssp EEEEEGGGTCSCSSSSBCTTSCC-----------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred EEecchheecCCCCCCCCCCCCC-----------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 9999999998643 45555211 11278999999999999887 348999
Q ss_pred EEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHH
Q psy16243 405 AMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINC 484 (782)
Q Consensus 405 ~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~a 484 (782)
+++||+++|||...+..+ + .+ ....+......+......|++++.+++++|+|++++
T Consensus 180 ~ilr~~~vyGp~~~~~~~-------~-----------~~-----~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a 236 (347)
T d1t2aa_ 180 VNGILFNHESPRRGANFV-------T-----------RK-----ISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEA 236 (347)
T ss_dssp EEEEECCEECTTSCTTSH-------H-----------HH-----HHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred EEEEecceeCCCCCCCcc-------c-----------cc-----cceeeehhhcCCcceeecCCCcceeeeeEecHHHHH
Confidence 999999999986543220 0 00 111233333444556677899999999999999999
Q ss_pred HHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 485 IISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 485 ii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
++.++... ....|+++.. ...++++.........++.
T Consensus 237 ~~~~~~~~--------------------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 273 (347)
T d1t2aa_ 237 MWLMLQND--------------------------EPEDFVIATG--EVHSVREFVEKSFLHIGKT 273 (347)
T ss_dssp HHHHHHSS--------------------------SCCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred HHHHhhcC--------------------------CCccceeccc--cccccchhhhhhhhhhcce
Confidence 99988653 2356788877 7889999998887776653
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.85 E-value=2.6e-20 Score=203.48 Aligned_cols=240 Identities=16% Similarity=0.098 Sum_probs=154.0
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc---CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD---NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~---~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
.++.++.||++++ +.++++++ .+|+|+|+||..... .......++|+.||.+++++|++. +++++++
T Consensus 69 ~~~~~~~~Di~d~------~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~ 141 (383)
T d1gy8a_ 69 RYAALEVGDVRNE------DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIF 141 (383)
T ss_dssp CCCEEEESCTTCH------HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEE
T ss_pred cceEEEECcccCH------HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCccccc
Confidence 5788999999998 77887775 579999999987654 234467889999999999999997 8899999
Q ss_pred EecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEec
Q psy16243 331 VSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVR 408 (782)
Q Consensus 331 vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvR 408 (782)
+||..+++............+...+ .+. .+.+.|+.||..+|+++..+. .|++++++|
T Consensus 142 ~~s~~~~~~~~~~~~~~~~~~~~e~-----------------~~~---~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR 201 (383)
T d1gy8a_ 142 SSSAAIFGNPTMGSVSTNAEPIDIN-----------------AKK---SPESPYGESKLIAERMIRDCAEAYGIKGICLR 201 (383)
T ss_dssp EEEGGGTBSCCC-----CCCCBCTT-----------------SCC---BCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred ccccccccccccccccccccccccc-----------------cCC---CCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEe
Confidence 9999888764321111000000000 111 122889999999999999883 599999999
Q ss_pred CCeEEeccCCCCcccccccCCcccccccCCCcccccccc------cchhhHHHHhhcCceeeec------cCCCcccccc
Q psy16243 409 PSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNH------YGPTGIVAGAGLGLLRSMH------ADPELVADMV 476 (782)
Q Consensus 409 p~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~------~~~~~~~~~~~~g~~~~~~------~~~~~~~d~V 476 (782)
|+++|||...+... ....++. .++|-..... ..+..+......+....+. ++|.+.+||+
T Consensus 202 ~~~vyG~~~~~~~~--~~~~~~~------~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi 273 (383)
T d1gy8a_ 202 YFNACGAHEDGDIG--EHYQGST------HLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYV 273 (383)
T ss_dssp ECEEECCCTTSSCS--CCSTTCC------SHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEE
T ss_pred cceeeccCcccccc--ccccccc------hhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeE
Confidence 99999987654220 0000000 0000000000 0000011111122222233 3578889999
Q ss_pred chhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 477 PADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 477 pVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
||+|+|++++.++......... -.....++||++++ +++++.|+++.+.+..+..
T Consensus 274 ~v~D~~~a~~~~~~~~~~~~~~----------------~~~~~~~i~Ni~s~--~~~s~~el~~~i~~~~~~~ 328 (383)
T d1gy8a_ 274 HVCDLASAHILALDYVEKLGPN----------------DKSKYFSVFNLGTS--RGYSVREVIEVARKTTGHP 328 (383)
T ss_dssp EHHHHHHHHHHHHHHHHTCCTT----------------TGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCCC
T ss_pred EHHHHHHHHHHHHhhhcccccc----------------ccccCccEEEeCCC--CceeHHHHHHHHHHHhCCC
Confidence 9999999999988654221000 01235689999999 8999999999999987744
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.83 E-value=4.2e-20 Score=197.91 Aligned_cols=261 Identities=11% Similarity=-0.003 Sum_probs=173.9
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.|+++|||.+|+.|..+ .+.|+. .+++|+++.|..+.... +++..+... ...
T Consensus 1 ~k~~LVTGatGfiG~~l----v~~Ll~---------------~g~~V~~~~r~~~~~~~-~~~~~~~~~--------~~~ 52 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYL----TEFLLG---------------KGYEVHGLIRRSSNFNT-QRINHIYID--------PHN 52 (339)
T ss_dssp CCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEECCCSSCCC-TTTTTTC-------------
T ss_pred CCEEEEeCCccHHHHHH----HHHHHH---------------CcCEEEEEECCCcccch-hhhhhhhhh--------hhh
Confidence 47899999444444333 122322 27889999996542111 111111100 000
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc--CceEEEEcCcccCchh---hHHHHHHhhHHHHHHHHHHHHHc----cC
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD--NIHVVFHCAATVRFDA---HLKVAVSINLRATKALLEMAKEM----KQ 324 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~--~vdiViH~Aa~v~f~~---~~~~~~~~Nv~gt~~Lle~a~~~----~~ 324 (782)
.....+.++.+|+++. +.+...++ ++|+|+|+||...... ........|+.|+.++++++++. ..
T Consensus 53 ~~~~~~~~~~~Di~~~------~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~ 126 (339)
T d1n7ha_ 53 VNKALMKLHYADLTDA------SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGR 126 (339)
T ss_dssp ---CCEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC
T ss_pred ccccceEEEEccccCH------HHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhccccccc
Confidence 1235788999999987 77777765 4699999999876543 44567899999999999998754 23
Q ss_pred CceEEEEecceeccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCC
Q psy16243 325 LKSFVHVSTAYSNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAG 401 (782)
Q Consensus 325 ~~~fV~vST~~v~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~g 401 (782)
..++++.||+++++... .+.|+.. .. +.+.|+.||..+|.++..+ ..+
T Consensus 127 ~~~~~~~ss~~~~~~~~~~~~E~~~--------------------------~~---p~~~Y~~sK~~~E~~~~~~~~~~~ 177 (339)
T d1n7ha_ 127 TVKYYQAGSSEMFGSTPPPQSETTP--------------------------FH---PRSPYAASKCAAHWYTVNYREAYG 177 (339)
T ss_dssp CCEEEEEEEGGGGTTSCSSBCTTSC--------------------------CC---CCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred ceeeeecccceecccCCCCCCCCCC--------------------------CC---CcchhhHHHHHHHHHHHHHHHHhC
Confidence 45788889988887644 4555421 11 1288999999999999887 348
Q ss_pred CcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhc-CceeeeccCCCccccccchhH
Q psy16243 402 MPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGL-GLLRSMHADPELVADMVPADN 480 (782)
Q Consensus 402 lp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~d~VpVDd 480 (782)
++++++||++||||...+ ++... .....+..... +....+.|++.+.+|++||+|
T Consensus 178 ~~~~ilR~~~vyGp~~~~----------------------~~~~~--~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D 233 (339)
T d1n7ha_ 178 LFACNGILFNHESPRRGE----------------------NFVTR--KITRALGRIKVGLQTKLFLGNLQASRDWGFAGD 233 (339)
T ss_dssp CEEEEEEECCEECTTSCT----------------------TSHHH--HHHHHHHHHHHTSCCCEEESCTTCEEECEEHHH
T ss_pred CCEEEEEEccccCCCCCC----------------------CCCcc--hhhHHHHHHhcCCCCeEEeCCCCccccceeeeh
Confidence 999999999999986432 11111 00111222222 334456788999999999999
Q ss_pred HHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 481 VINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 481 va~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+++++..++... ....++++.+ .+.++.++++.+.+..+..
T Consensus 234 ~a~~~~~~~~~~--------------------------~~~~~~~~~~--~~~s~~~~~~~~~~~~~~~ 274 (339)
T d1n7ha_ 234 YVEAMWLMLQQE--------------------------KPDDYVVATE--EGHTVEEFLDVSFGYLGLN 274 (339)
T ss_dssp HHHHHHHHHTSS--------------------------SCCEEEECCS--CEEEHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcC--------------------------CCCccccccc--cccccchhhhhhhhhhhcc
Confidence 999999888653 2345566666 7899999999999887754
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=7.5e-20 Score=194.05 Aligned_cols=213 Identities=13% Similarity=0.049 Sum_probs=148.9
Q ss_pred HhHHHHhc--CceEEEEcCcccCch----hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceeccCCC--cccccc
Q psy16243 276 EDRQTLVD--NIHVVFHCAATVRFD----AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQP--IIEERF 347 (782)
Q Consensus 276 ~~~~~l~~--~vdiViH~Aa~v~f~----~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~~~~--~i~E~~ 347 (782)
+.+..+++ .+|.|+|+|+.+... .+..+++++|+.||.+++++|++. ++++|||+||.+|||... ++.|+.
T Consensus 44 ~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~vyg~~~~~~~~E~~ 122 (315)
T d1e6ua_ 44 RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAKQPMAESE 122 (315)
T ss_dssp HHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCCSSBCGGG
T ss_pred HHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCceEcCCCCCCCccCCc
Confidence 45555544 479999999876543 344567889999999999999997 899999999999998643 455542
Q ss_pred cCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC--CCCcEEEecCCeEEeccCCCCccccc
Q psy16243 348 YEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--AGMPVAMVRPSIVIATNKEPIPGWIN 425 (782)
Q Consensus 348 ~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--~glp~~IvRp~~v~G~~~~p~~g~~~ 425 (782)
... .++..+ .+.||.||.++|+++..+. .|++++|+||++||||+..+....
T Consensus 123 ~~~---------------------~~~~~~---~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~-- 176 (315)
T d1e6ua_ 123 LLQ---------------------GTLEPT---NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSN-- 176 (315)
T ss_dssp TTS---------------------SCCCGG---GHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTC--
T ss_pred ccc---------------------CCCCCC---CCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccc--
Confidence 110 011111 1569999999999999873 499999999999999875432100
Q ss_pred ccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccc
Q psy16243 426 NHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKL 505 (782)
Q Consensus 426 ~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~ 505 (782)
..................+......+++...+++++++|++.++..++.........
T Consensus 177 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~------- 233 (315)
T d1e6ua_ 177 ----------------SHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLE------- 233 (315)
T ss_dssp ----------------SSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHH-------
T ss_pred ----------------cccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhccccccc-------
Confidence 001111111123344456667778889999999999999999998887653211000
Q ss_pred cccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 506 VADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 506 ~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
........+|++++ .+.+..++.+.+.+..+..
T Consensus 234 ---------~~~~~~~~~~~~~~--~~~~i~~~~~~i~~~~~~~ 266 (315)
T d1e6ua_ 234 ---------NTQPMLSHINVGTG--VDCTIRELAQTIAKVVGYK 266 (315)
T ss_dssp ---------TSBTTBCCEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred ---------cccccccccccCCC--cchHHHHHHHHHHHHhCCC
Confidence 01234678999988 8899999999999877643
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.81 E-value=1.7e-19 Score=192.51 Aligned_cols=271 Identities=19% Similarity=0.201 Sum_probs=175.0
Q ss_pred eeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCccc
Q psy16243 176 MVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCPHY 255 (782)
Q Consensus 176 ~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~~~ 255 (782)
.|+|||.+|+.|..+ .+.|+++ +.+|.++.|...... .+++..+. .
T Consensus 2 KILVTGatGfIGs~l----v~~Ll~~---------------g~~V~~id~~~~~~~-~~~~~~~~--------------~ 47 (338)
T d1orra_ 2 KLLITGGCGFLGSNL----ASFALSQ---------------GIDLIVFDNLSRKGA-TDNLHWLS--------------S 47 (338)
T ss_dssp EEEEETTTSHHHHHH----HHHHHHT---------------TCEEEEEECCCSTTH-HHHHHHHH--------------T
T ss_pred EEEEECCCcHHHHHH----HHHHHHC---------------cCEEEEEECCCcccc-hhHHHHhh--------------c
Confidence 489999444444433 2344322 567888765433222 23333321 1
Q ss_pred ccceeEEecCCCCCCCCCCHHhHHHHhcCc--eEEEEcCcccCchh---hHHHHHHhhHHHHHHHHHHHHHccCCceEEE
Q psy16243 256 LSKMVAVTGDCLKPGVGINSEDRQTLVDNI--HVVFHCAATVRFDA---HLKVAVSINLRATKALLEMAKEMKQLKSFVH 330 (782)
Q Consensus 256 ~~kv~~i~gDi~~~~lGl~~~~~~~l~~~v--diViH~Aa~v~f~~---~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~ 330 (782)
..+++++.||+++. +++.++++++ |+|||+||.+.... +.....++|+.||.+|+++|.+. +++++++
T Consensus 48 ~~~~~~i~~Di~~~------~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~ 120 (338)
T d1orra_ 48 LGNFEFVHGDIRNK------NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNII 120 (338)
T ss_dssp TCCCEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEE
T ss_pred cCCcEEEEcccCCH------HHHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc-ccccccc
Confidence 34789999999997 8888888765 99999999876653 34578899999999999999998 5665555
Q ss_pred Eecc-eeccCCCc--ccccc--cCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCc
Q psy16243 331 VSTA-YSNCRQPI--IEERF--YEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMP 403 (782)
Q Consensus 331 vST~-~v~~~~~~--i~E~~--~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp 403 (782)
.||. ++++.... ..+.. .+....+. .....++ ..+.+.|+.+|..+|.++... ..+..
T Consensus 121 ~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~---~~~~~~y~~~k~~~e~~~~~~~~~~~~~ 185 (338)
T d1orra_ 121 YSSTNKVYGDLEQYKYNETETRYTCVDKPN------------GYDESTQ---LDFHSPYGCSKGAADQYMLDYARIFGLN 185 (338)
T ss_dssp EEEEGGGGTTCTTSCEEECSSCEEETTCTT------------CBCTTSC---CCCCHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred cccccccccccccccccccccccccccccc------------CcccCCc---cccccccccccchhhhhhhhhhhccCcc
Confidence 5555 44443321 11110 00000000 0000011 112378999999999998876 34888
Q ss_pred EEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHh-----hcCceeeeccCCCccccccch
Q psy16243 404 VAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGA-----GLGLLRSMHADPELVADMVPA 478 (782)
Q Consensus 404 ~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~d~VpV 478 (782)
..++|++.++|+...+..+. +.. ..++..+ ..+....+.|++...+|++||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~------------------~~~------~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v 241 (338)
T d1orra_ 186 TVVFRHSSMYGGRQFATYDQ------------------GWV------GWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA 241 (338)
T ss_dssp EEEEEECCEECTTCCCBTTB------------------CHH------HHHHHHHHHHHTTCCCCEEEESSSCCEEECEEH
T ss_pred cccccccceeeccccccccc------------------ccc------chhhHHHHHHHhccCCceEEeCCCceeEeeecc
Confidence 99999999998654321100 111 1122222 235556778899999999999
Q ss_pred hHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 479 DNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 479 Ddva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
+|++++++.++..... ..+++||+..+..+++++.|+++.+.+..+..
T Consensus 242 ~D~~~~~~~~l~~~~~-----------------------~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~ 289 (338)
T d1orra_ 242 EDMISLYFTALANVSK-----------------------IRGNAFNIGGTIVNSLSLLELFKLLEDYCNID 289 (338)
T ss_dssp HHHHHHHHHHHHTHHH-----------------------HTTCEEEESSCGGGEEEHHHHHHHHHHHHTCC
T ss_pred cchhhHHHHHHhcccc-----------------------ccCccccccccccccccHHHHHHHHHHHHCCC
Confidence 9999999998865321 24679999766558899999999999887654
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.77 E-value=3.1e-18 Score=184.41 Aligned_cols=261 Identities=17% Similarity=0.072 Sum_probs=175.7
Q ss_pred cCCCeeEeeccccCCCCCCChhh-HHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSED-RQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~-~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
|.+|.|+||| |+|+.|.. .+.|+. .+.+|+.+.|....... .++..
T Consensus 6 ~~~KkILVTG-----~tGfIGs~lv~~Ll~---------------~g~~V~~~~r~~~~~~~--~~~~~----------- 52 (356)
T d1rkxa_ 6 WQGKRVFVTG-----HTGFKGGWLSLWLQT---------------MGATVKGYSLTAPTVPS--LFETA----------- 52 (356)
T ss_dssp HTTCEEEEET-----TTSHHHHHHHHHHHH---------------TTCEEEEEESSCSSSSC--HHHHT-----------
T ss_pred hCCCEEEEEC-----CCCHHHHHHHHHHHH---------------CCCEEEEEECCCCccHH--HHhhh-----------
Confidence 7899999999 55654322 233322 25789999987543221 11111
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCC
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQL 325 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~ 325 (782)
...++++++.|||+++ +.+.++++. .++|+|+||..... .....+..+|+.||.+++++|++.+..
T Consensus 53 ---~~~~~i~~~~~Dl~d~------~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~ 123 (356)
T d1rkxa_ 53 ---RVADGMQSEIGDIRDQ------NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGV 123 (356)
T ss_dssp ---TTTTTSEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCC
T ss_pred ---hcccCCeEEEeeccCh------HhhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhccccc
Confidence 1234799999999987 778777764 59999999986543 344568899999999999999998777
Q ss_pred ceEEEEecceeccCCC---cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC---
Q psy16243 326 KSFVHVSTAYSNCRQP---IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG--- 399 (782)
Q Consensus 326 ~~fV~vST~~v~~~~~---~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~--- 399 (782)
+.+++.||..+++... ..+|+. +. .+.+.|+.+|..+|..+..+.
T Consensus 124 ~~~~~~s~~~~~~~~~~~~~~~~~~--------------------------~~---~p~~~y~~~k~~~e~~~~~~~~~~ 174 (356)
T d1rkxa_ 124 KAVVNITSDKCYDNKEWIWGYRENE--------------------------AM---GGYDPYSNSKGCAELVTSSYRNSF 174 (356)
T ss_dssp CEEEEECCGGGBCCCCSSSCBCTTS--------------------------CB---CCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccc--------------------------cc---CCCCccccccccchhhhhHHhhhc
Confidence 7777777776665433 222221 11 112789999999998887641
Q ss_pred --------CCCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCc
Q psy16243 400 --------AGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPEL 471 (782)
Q Consensus 400 --------~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 471 (782)
.++.+++.||+.+|||.+.+.. ..+..++.+. .+..+...+.++.
T Consensus 175 ~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~--------------------------~~i~~~~~~~-~~~~~~~~~~~~~ 227 (356)
T d1rkxa_ 175 FNPANYGQHGTAVATVRAGNVIGGGDWALD--------------------------RIVPDILRAF-EQSQPVIIRNPHA 227 (356)
T ss_dssp SCGGGHHHHCCEEEEEECCCEECTTCCCSS--------------------------CHHHHHHHHH-HTTCCEECSCTTC
T ss_pred ccchhccccCceEEeccCCCeeCCCcchhh--------------------------HHHHHHHHHH-hCCCceEEeeccc
Confidence 2678999999999997543211 0111233443 4445557788999
Q ss_pred cccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 472 VADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 472 ~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
.+++++|+|++.+++.++...... ........+...+....+++.++++.+.+..+..+
T Consensus 228 ~~~~~~v~D~~~a~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 286 (356)
T d1rkxa_ 228 IRPWQHVLEPLSGYLLLAQKLYTD--------------------GAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA 286 (356)
T ss_dssp EECCEETHHHHHHHHHHHHHHHHT--------------------CGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC
T ss_pred cccccccccccchhhhhhhhhccc--------------------ccccccccccccccccccccchhhhhhHHHhCCCc
Confidence 999999999999999888664211 01123344444333378999999999999887543
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=9e-18 Score=170.22 Aligned_cols=159 Identities=18% Similarity=0.145 Sum_probs=120.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|.|+|||.+|+.|..+ .+.|+.+ ....+|+++.|.+....
T Consensus 12 m~~k~IlItGaTG~iG~~l----~~~Ll~~-------------g~~~~v~~~~R~~~~~~-------------------- 54 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVL----LKEILEQ-------------GLFSKVTLIGRRKLTFD-------------------- 54 (232)
T ss_dssp HTCCEEEEECTTSHHHHHH----HHHHHHH-------------TCCSEEEEEESSCCCCC--------------------
T ss_pred CCCCEEEEECCCcHHHHHH----HHHHHhC-------------CCCCEEEEEecChhhhc--------------------
Confidence 3468899999444443332 2333221 22358999998543110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEE
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHV 331 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~v 331 (782)
.....++....+|+.+. +++...++++|+|||+|+......+..++.++|+.++.+++++|++. ++++|||+
T Consensus 55 -~~~~~~i~~~~~D~~~~------~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~ 126 (232)
T d2bkaa1 55 -EEAYKNVNQEVVDFEKL------DDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLL 126 (232)
T ss_dssp -SGGGGGCEEEECCGGGG------GGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEE
T ss_pred -ccccceeeeeeeccccc------ccccccccccccccccccccccccchhhhhhhcccccceeeeccccc-CccccccC
Confidence 12345778888998876 78888899999999999987766777788999999999999999997 79999999
Q ss_pred ecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCc-EEEecCC
Q psy16243 332 STAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMP-VAMVRPS 410 (782)
Q Consensus 332 ST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp-~~IvRp~ 410 (782)
||..++... ++.|+.+|..+|..+.+. +++ ++|+|||
T Consensus 127 Ss~~~~~~~----------------------------------------~~~Y~~~K~~~E~~l~~~--~~~~~~IlRP~ 164 (232)
T d2bkaa1 127 SSKGADKSS----------------------------------------NFLYLQVKGEVEAKVEEL--KFDRYSVFRPG 164 (232)
T ss_dssp CCTTCCTTC----------------------------------------SSHHHHHHHHHHHHHHTT--CCSEEEEEECC
T ss_pred CccccccCc----------------------------------------cchhHHHHHHhhhccccc--cccceEEecCc
Confidence 998765432 178999999999999775 454 8999999
Q ss_pred eEEeccC
Q psy16243 411 IVIATNK 417 (782)
Q Consensus 411 ~v~G~~~ 417 (782)
.++|+..
T Consensus 165 ~i~G~~~ 171 (232)
T d2bkaa1 165 VLLCDRQ 171 (232)
T ss_dssp EEECTTG
T ss_pred eeecCCC
Confidence 9999753
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.61 E-value=2e-15 Score=156.20 Aligned_cols=182 Identities=15% Similarity=0.106 Sum_probs=136.0
Q ss_pred HhHHHHhc--CceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceeccCCC--ccccccc
Q psy16243 276 EDRQTLVD--NIHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQP--IIEERFY 348 (782)
Q Consensus 276 ~~~~~l~~--~vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~~~~--~i~E~~~ 348 (782)
++++++++ +.|+|||+|+..... .........|+.++..+++.+... ...+++.||..+++... +..|...
T Consensus 42 ~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~ss~~v~~~~~~~~~~e~~~ 119 (281)
T d1vl0a_ 42 LAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV--GAEIVQISTDYVFDGEAKEPITEFDE 119 (281)
T ss_dssp HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH--TCEEEEEEEGGGSCSCCSSCBCTTSC
T ss_pred HHHHHHHHHcCCCEEEeeccccccccccccchhhcccccccccccccccccc--cccccccccceeeecccccccccccc
Confidence 66677776 459999999987644 334567888999999999988874 46788889888887653 3333321
Q ss_pred CCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEeccCCCCcccccccC
Q psy16243 349 EPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIATNKEPIPGWINNHY 428 (782)
Q Consensus 349 ~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~~~~p~~g~~~~~~ 428 (782)
+ ...+.|+.+|..+|.++... +.+.+|+||+++||+....
T Consensus 120 ~-----------------------------~~~~~~~~~k~~~e~~~~~~--~~~~~i~R~~~vyG~~~~~--------- 159 (281)
T d1vl0a_ 120 V-----------------------------NPQSAYGKTKLEGENFVKAL--NPKYYIVRTAWLYGDGNNF--------- 159 (281)
T ss_dssp C-----------------------------CCCSHHHHHHHHHHHHHHHH--CSSEEEEEECSEESSSSCH---------
T ss_pred c-----------------------------cchhhhhhhhhHHHHHHHHh--CCCccccceeEEeCCCccc---------
Confidence 1 11278999999999999877 5689999999999974321
Q ss_pred CcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhccccchhhhhccccccc
Q psy16243 429 GPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVAD 508 (782)
Q Consensus 429 ~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~ 508 (782)
...++..+..+...... ++..+++++++|+++++..++...
T Consensus 160 ---------------------~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~~~~~~~~~~~~---------------- 200 (281)
T d1vl0a_ 160 ---------------------VKTMINLGKTHDELKVV--HDQVGTPTSTVDLARVVLKVIDEK---------------- 200 (281)
T ss_dssp ---------------------HHHHHHHHHHCSEEEEE--SSCEECCEEHHHHHHHHHHHHHHT----------------
T ss_pred ---------------------ccchhhhhccCCceeec--CCceeccchhhhhhhhhhhhhhhc----------------
Confidence 11344455555544444 468899999999999999998653
Q ss_pred ccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 509 SLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 509 ~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
..++||++++ +++|+.|+++.+.+.++...
T Consensus 201 ----------~~g~~~~~~~--~~~s~~e~~~~i~~~~g~~~ 230 (281)
T d1vl0a_ 201 ----------NYGTFHCTCK--GICSWYDFAVEIFRLTGIDV 230 (281)
T ss_dssp ----------CCEEEECCCB--SCEEHHHHHHHHHHHHCCCC
T ss_pred ----------ccCceeEeCC--CccchHHHHHHHHHHhCCCc
Confidence 2469999999 89999999999999988643
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.60 E-value=3e-15 Score=156.46 Aligned_cols=184 Identities=17% Similarity=0.127 Sum_probs=121.1
Q ss_pred cCceEEEEcCcccCch-hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceeccCCC--cccccccCCCCChhHHHH
Q psy16243 283 DNIHVVFHCAATVRFD-AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQP--IIEERFYEPPVNPNHLIQ 359 (782)
Q Consensus 283 ~~vdiViH~Aa~v~f~-~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~~~~--~i~E~~~~~~~~~~~~~~ 359 (782)
..+++|+|+||..... .+.......|+.++.+++++++.. +++ +++.||..+++... ..+|+..+
T Consensus 67 ~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~-~v~~ss~~~~~~~~~~~~~~~~~~---------- 134 (307)
T d1eq2a_ 67 GDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EIP-FLYASSAATYGGRTSDFIESREYE---------- 134 (307)
T ss_dssp SSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TCC-EEEEEEGGGGTTCCSCBCSSGGGC----------
T ss_pred cchhhhhhhcccccccccccccccccccccccccccccccc-ccc-cccccccccccccccccccccccc----------
Confidence 3568999999875443 345567788999999999999986 665 66777776665432 22222111
Q ss_pred HHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc--CCCCcEEEecCCeEEeccCCCCcccccccCCcccccccC
Q psy16243 360 ITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--GAGMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNK 437 (782)
Q Consensus 360 ~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--~~glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~ 437 (782)
...+.|+.+|..+|.++..+ ..+++++++||+++|||...+..
T Consensus 135 -------------------~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~---------------- 179 (307)
T d1eq2a_ 135 -------------------KPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKG---------------- 179 (307)
T ss_dssp -------------------CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGG----------------
T ss_pred -------------------ccccccccccchhhhhccccccccccccccccceeEeeccccccc----------------
Confidence 12389999999999999988 45899999999999998653211
Q ss_pred CCcccccccccchhhHHHHhhcCceee-eccCCCccccccchhHHHHHHHHhhhhccccchhhhhcccccccccCCCCCC
Q psy16243 438 EPIPGWINNHYGPTGIVAGAGLGLLRS-MHADPELVADMVPADNVINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPD 516 (782)
Q Consensus 438 ~~~~gw~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (782)
+.. .....+...+..|.... ..|++...++++|++|++.++..+....
T Consensus 180 -----~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~------------------------ 228 (307)
T d1eq2a_ 180 -----SMA--SVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG------------------------ 228 (307)
T ss_dssp -----GGS--CHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC------------------------
T ss_pred -----ccc--ccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhc------------------------
Confidence 000 01113445555554433 4578889999999999999998877642
Q ss_pred CCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 517 DTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 517 ~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
...+||++++ ++.+++|+++.+.+..++
T Consensus 229 --~~~~~~~~~~--~~~si~~i~~~i~~~~~~ 256 (307)
T d1eq2a_ 229 --VSGIFNLGTG--RAESFQAVADATLAYHKK 256 (307)
T ss_dssp --CCEEEEESCS--CCBCHHHHHHHC------
T ss_pred --cccccccccc--cchhHHHHHHHHHHhcCC
Confidence 3579999999 899999999999876654
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.58 E-value=1.9e-15 Score=157.30 Aligned_cols=235 Identities=13% Similarity=0.085 Sum_probs=160.6
Q ss_pred CCeeEeeccccCCCCCCChhh-HHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 174 SKMVAVTGDCLKPGVGINSED-RQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~-~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
+|.|+||| |+|+.|.. .+.|++ .+.+|+++.|........+.......
T Consensus 3 kkKILVtG-----atG~iG~~l~~~L~~---------------~G~~V~~l~R~~~~~~~~~~~~~~~~----------- 51 (307)
T d1qyca_ 3 RSRILLIG-----ATGYIGRHVAKASLD---------------LGHPTFLLVRESTASSNSEKAQLLES----------- 51 (307)
T ss_dssp CCCEEEES-----TTSTTHHHHHHHHHH---------------TTCCEEEECCCCCTTTTHHHHHHHHH-----------
T ss_pred CCEEEEEC-----CCcHHHHHHHHHHHH---------------CCCeEEEEECCCccccchhHHHHHHh-----------
Confidence 56799999 55554432 244432 26789999998654433333222211
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
....++.++.+|+.+. ......+++++.|+|+++.. ++.++.++++++..+ +.+++++.|
T Consensus 52 -~~~~~~~~~~~d~~~~------~~~~~~~~~~~~vi~~~~~~------------~~~~~~~~~~a~~~~-~~~~~~~~s 111 (307)
T d1qyca_ 52 -FKASGANIVHGSIDDH------ASLVEAVKNVDVVISTVGSL------------QIESQVNIIKAIKEV-GTVKRFFPS 111 (307)
T ss_dssp -HHTTTCEEECCCTTCH------HHHHHHHHTCSEEEECCCGG------------GSGGGHHHHHHHHHH-CCCSEEECS
T ss_pred -hccCCcEEEEeecccc------hhhhhhhhhceeeeeccccc------------ccchhhHHHHHHHHh-ccccceeee
Confidence 0124688999999987 77888889999999998754 334567788888887 778888888
Q ss_pred cceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeE
Q psy16243 333 TAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIV 412 (782)
Q Consensus 333 T~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v 412 (782)
|........... .....|...+..+|..+... +++++|+||+.+
T Consensus 112 ~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~r~~~v 155 (307)
T d1qyca_ 112 EFGNDVDNVHAV----------------------------------EPAKSVFEVKAKVRRAIEAE--GIPYTYVSSNCF 155 (307)
T ss_dssp CCSSCTTSCCCC----------------------------------TTHHHHHHHHHHHHHHHHHH--TCCBEEEECCEE
T ss_pred cccccccccccc----------------------------------ccccccccccccccchhhcc--CCCceeccccee
Confidence 764433211100 01145777777888877665 789999999999
Q ss_pred EeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhc
Q psy16243 413 IATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNV 492 (782)
Q Consensus 413 ~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 492 (782)
+|+...+.. ........+.....++.++..+++|+++|+|++++.++...
T Consensus 156 ~g~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 205 (307)
T d1qyca_ 156 AGYFLRSLA------------------------------QAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP 205 (307)
T ss_dssp HHHHTTTTT------------------------------CTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG
T ss_pred cCCCccchh------------------------------hhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcCh
Confidence 997543322 01112234445567788999999999999999999988653
Q ss_pred cccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 493 HQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
. .....+||++++ +.+|+.|+++.+.+..|..+
T Consensus 206 ~-----------------------~~~~~~~~~~~~--~~~s~~ei~~~~~~~~G~~~ 238 (307)
T d1qyca_ 206 R-----------------------TLNKTLYLRLPA--NTLSLNELVALWEKKIDKTL 238 (307)
T ss_dssp G-----------------------GTTEEEECCCGG--GEEEHHHHHHHHHHHTTSCC
T ss_pred h-----------------------hcCceeEEeCCC--CccCHHHHHHHHHHHHCCCC
Confidence 1 123456777787 88999999999999988653
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.57 E-value=4.9e-15 Score=155.16 Aligned_cols=241 Identities=11% Similarity=-0.011 Sum_probs=161.9
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
++.|+||| |+|+.|..+ +.++.+ .+.+|++++|........ ..+....
T Consensus 3 k~KILVtG-----atG~iG~~l---------~~~L~~-----~G~~V~~~~R~~~~~~~~-~~~~~~~------------ 50 (312)
T d1qyda_ 3 KSRVLIVG-----GTGYIGKRI---------VNASIS-----LGHPTYVLFRPEVVSNID-KVQMLLY------------ 50 (312)
T ss_dssp CCCEEEES-----TTSTTHHHH---------HHHHHH-----TTCCEEEECCSCCSSCHH-HHHHHHH------------
T ss_pred CCEEEEEC-----CCCHHHHHH---------HHHHHh-----CCCEEEEEECCCcccchh-HHHHHhh------------
Confidence 34599999 566644221 222221 268899999975543322 1111110
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
....+++++.||+++. +.+...++++++++|+++.... ..|..++.+++++|++. +..++++.||
T Consensus 51 ~~~~~v~~v~~d~~d~------~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~a~~~-~~~~~v~~Ss 115 (312)
T d1qyda_ 51 FKQLGAKLIEASLDDH------QRLVDALKQVDVVISALAGGVL--------SHHILEQLKLVEAIKEA-GNIKRFLPSE 115 (312)
T ss_dssp HHTTTCEEECCCSSCH------HHHHHHHTTCSEEEECCCCSSS--------STTTTTHHHHHHHHHHS-CCCSEEECSC
T ss_pred hccCCcEEEEeecccc------hhhhhhccCcchhhhhhhhccc--------ccchhhhhHHHHHHHHh-cCCcEEEEee
Confidence 0124789999999987 8889999999999999886433 45777889999999987 5566777787
Q ss_pred ceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEE
Q psy16243 334 AYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVI 413 (782)
Q Consensus 334 ~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~ 413 (782)
..++..... . ...+...|..+|..+|...... +++++++||+.++
T Consensus 116 ~g~~~~~~~-------~--------------------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~r~~~~~ 160 (312)
T d1qyda_ 116 FGMDPDIME-------H--------------------------ALQPGSITFIDKRKVRRAIEAA--SIPYTYVSSNMFA 160 (312)
T ss_dssp CSSCTTSCC-------C--------------------------CCSSTTHHHHHHHHHHHHHHHT--TCCBCEEECCEEH
T ss_pred ccccCCCcc-------c--------------------------ccchhhhhhHHHHHHHHhhccc--ccceEEeccceee
Confidence 655433210 0 0112267888888888876554 7899999999999
Q ss_pred eccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhcc
Q psy16243 414 ATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVH 493 (782)
Q Consensus 414 G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 493 (782)
|+...+.. .+... ....+....++++++..+++|+++|+|++++.++....
T Consensus 161 g~~~~~~~--------------------~~~~~---------~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~ 211 (312)
T d1qyda_ 161 GYFAGSLA--------------------QLDGH---------MMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ 211 (312)
T ss_dssp HHHTTTSS--------------------CTTCC---------SSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG
T ss_pred cCCccchh--------------------hHHHH---------hhhcccccccccccccccceeeHHHHHHHHHHHhcCcc
Confidence 97544322 11100 01123344567889999999999999999999986531
Q ss_pred ccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccccC
Q psy16243 494 QTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEIP 550 (782)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~p 550 (782)
.....+|+++++ +.+|++|+++.+.+..++..
T Consensus 212 -----------------------~~~~~~~~~~~~--~~~s~~e~~~~~~~~~g~~~ 243 (312)
T d1qyda_ 212 -----------------------TLNKTMYIRPPM--NILSQKEVIQIWERLSEQNL 243 (312)
T ss_dssp -----------------------GSSSEEECCCGG--GEEEHHHHHHHHHHHHTCCC
T ss_pred -----------------------ccCceEEEeCCC--cCCCHHHHHHHHHHHHCCCC
Confidence 123346777777 88999999999999887643
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=2.4e-14 Score=141.71 Aligned_cols=190 Identities=14% Similarity=0.126 Sum_probs=133.6
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.|.|+|||.+|..|..+ .+.|+. .+.+|.++.|..... . .
T Consensus 3 ~kkIlV~GatG~iG~~v----~~~Ll~---------------~g~~V~~~~R~~~~~------~---------------~ 42 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTT----LAQAVQ---------------AGYEVTVLVRDSSRL------P---------------S 42 (205)
T ss_dssp CCEEEEESTTSHHHHHH----HHHHHH---------------TTCEEEEEESCGGGS------C---------------S
T ss_pred CCEEEEECCCCHHHHHH----HHHHHH---------------CcCEEEEEEcChhhc------c---------------c
Confidence 46799999444433332 233322 257899999964310 0 0
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEec
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVST 333 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST 333 (782)
....+++++.||++++ +++.++++++|+|||+++......+ ..++..+++++++++++. ++++||++||
T Consensus 43 ~~~~~~~~~~gD~~d~------~~l~~al~~~d~vi~~~g~~~~~~~----~~~~~~~~~~l~~aa~~~-~v~r~i~~ss 111 (205)
T d1hdoa_ 43 EGPRPAHVVVGDVLQA------ADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTS 111 (205)
T ss_dssp SSCCCSEEEESCTTSH------HHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECC
T ss_pred ccccccccccccccch------hhHHHHhcCCCEEEEEeccCCchhh----hhhhHHHHHHHHHHHHhc-CCCeEEEEee
Confidence 1124688999999998 8999999999999999987433222 245778999999999997 8999999999
Q ss_pred ceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEE
Q psy16243 334 AYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVI 413 (782)
Q Consensus 334 ~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~ 413 (782)
+.++.+....+.. ...|...|..+|+++++ .+++++|+||+.+.
T Consensus 112 ~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~e~~l~~--~~~~~tiirp~~~~ 155 (205)
T d1hdoa_ 112 AFLLWDPTKVPPR----------------------------------LQAVTDDHIRMHKVLRE--SGLKYVAVMPPHIG 155 (205)
T ss_dssp GGGTSCTTCSCGG----------------------------------GHHHHHHHHHHHHHHHH--TCSEEEEECCSEEE
T ss_pred eeccCCCcccccc----------------------------------ccccchHHHHHHHHHHh--cCCceEEEecceec
Confidence 9887653311110 14688999999999876 48999999999998
Q ss_pred eccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhc
Q psy16243 414 ATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNV 492 (782)
Q Consensus 414 G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 492 (782)
+.... + . .....++.....+|+++|+|.+++.++...
T Consensus 156 ~~~~~-----------------------~------------------~-~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~ 192 (205)
T d1hdoa_ 156 DQPLT-----------------------G------------------A-YTVTLDGRGPSRVISKHDLGHFMLRCLTTD 192 (205)
T ss_dssp CCCCC-----------------------S------------------C-CEEESSSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred CCCCc-----------------------c------------------c-EEEeeCCCCCCCcCCHHHHHHHHHHHhCCC
Confidence 53111 0 0 012334555667899999999999998653
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.51 E-value=6.4e-14 Score=140.60 Aligned_cols=186 Identities=14% Similarity=0.131 Sum_probs=126.6
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCch----------------hhHHHHHHhhHHHHHHHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFD----------------AHLKVAVSINLRATKALLEMAK 320 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~----------------~~~~~~~~~Nv~gt~~Lle~a~ 320 (782)
.+++++.+|++++ +++.++++++|+|+|+|+..... ........+|+.|++++++.+.
T Consensus 47 ~~~~~~~~d~~~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (252)
T d2q46a1 47 GEADVFIGDITDA------DSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK 120 (252)
T ss_dssp CCTTEEECCTTSH------HHHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHH
T ss_pred CCcEEEEeeeccc------cccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccc
Confidence 4788999999988 88999999999999999864321 1122456789999999999998
Q ss_pred HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCC
Q psy16243 321 EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGA 400 (782)
Q Consensus 321 ~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~ 400 (782)
.. ..+.+.+.|+..+.....+... .....|...+.+.+.+... .
T Consensus 121 ~~-~~~~~~~~s~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~--~ 164 (252)
T d2q46a1 121 VA-GVKHIVVVGSMGGTNPDHPLNK---------------------------------LGNGNILVWKRKAEQYLAD--S 164 (252)
T ss_dssp HH-TCSEEEEEEETTTTCTTCGGGG---------------------------------GGGCCHHHHHHHHHHHHHH--S
T ss_pred cc-cccccccccccccCCCCccccc---------------------------------ccccchhhhhhhhhhhhhc--c
Confidence 86 7888888887665432211000 0115677777777766654 4
Q ss_pred CCcEEEecCCeEEeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhH
Q psy16243 401 GMPVAMVRPSIVIATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADN 480 (782)
Q Consensus 401 glp~~IvRp~~v~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDd 480 (782)
+++++|+||+.++|+...... ...... .........+||++|
T Consensus 165 ~~~~~ilRp~~v~g~~~~~~~--------------------~~~~~~------------------~~~~~~~~~~i~~~D 206 (252)
T d2q46a1 165 GTPYTIIRAGGLLDKEGGVRE--------------------LLVGKD------------------DELLQTDTKTVPRAD 206 (252)
T ss_dssp SSCEEEEEECEEECSCTTSSC--------------------EEEEST------------------TGGGGSSCCEEEHHH
T ss_pred cccceeecceEEECCCcchhh--------------------hhhccC------------------cccccCCCCeEEHHH
Confidence 899999999999997543322 000000 000122346899999
Q ss_pred HHHHHHHhhhhccccchhhhhcccccccccCCCCCCCCcceEEEeecCC-CCcccHHHHHHHHHhcc
Q psy16243 481 VINCIISAAWNVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSST-QKPIKWKEFMALNEKAV 546 (782)
Q Consensus 481 va~aii~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~-~~~~t~~el~~~i~~~~ 546 (782)
+|++++.++..+ ...+++||++++. ....++.++.+.+.+..
T Consensus 207 va~a~~~~l~~~------------------------~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~ 249 (252)
T d2q46a1 207 VAEVCIQALLFE------------------------EAKNKAFDLGSKPEGTSTPTKDFKALFSQVT 249 (252)
T ss_dssp HHHHHHHHTTCG------------------------GGTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred HHHHHHHHhCCc------------------------cccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence 999999988654 1357899998752 23466777777666543
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.48 E-value=2e-14 Score=142.84 Aligned_cols=95 Identities=20% Similarity=0.299 Sum_probs=76.0
Q ss_pred HhcCceEEEEcCcccCch-hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHH
Q psy16243 281 LVDNIHVVFHCAATVRFD-AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQ 359 (782)
Q Consensus 281 l~~~vdiViH~Aa~v~f~-~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~ 359 (782)
+...+|+||||+|..... ....++...|+.++.+++++|++. ++++|+|+||..+++...
T Consensus 59 ~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~~~~~------------------ 119 (212)
T d2a35a1 59 LDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAKSS------------------ 119 (212)
T ss_dssp CCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTCS------------------
T ss_pred cccchheeeeeeeeeccccccccccccchhhhhhhcccccccc-cccccccccccccccccc------------------
Confidence 344579999999875332 344578889999999999999986 899999999987764321
Q ss_pred HHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCC-cEEEecCCeEEeccCC
Q psy16243 360 ITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGM-PVAMVRPSIVIATNKE 418 (782)
Q Consensus 360 ~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~gl-p~~IvRp~~v~G~~~~ 418 (782)
+.|+.+|..+|+.+.+. ++ .++|+||+.|||+...
T Consensus 120 ----------------------~~y~~~K~~~E~~l~~~--~~~~~~I~Rp~~v~G~~~~ 155 (212)
T d2a35a1 120 ----------------------IFYNRVKGELEQALQEQ--GWPQLTIARPSLLFGPREE 155 (212)
T ss_dssp ----------------------SHHHHHHHHHHHHHTTS--CCSEEEEEECCSEESTTSC
T ss_pred ----------------------cchhHHHHHHhhhcccc--ccccceeeCCcceeCCccc
Confidence 78999999999988654 55 4899999999997543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.48 E-value=1.7e-13 Score=142.41 Aligned_cols=193 Identities=20% Similarity=0.190 Sum_probs=131.3
Q ss_pred ecCCCCCCCCCCHHhHHHHhcC--ceEEEEcCcccCch---hhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEecceec
Q psy16243 263 TGDCLKPGVGINSEDRQTLVDN--IHVVFHCAATVRFD---AHLKVAVSINLRATKALLEMAKEMKQLKSFVHVSTAYSN 337 (782)
Q Consensus 263 ~gDi~~~~lGl~~~~~~~l~~~--vdiViH~Aa~v~f~---~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vST~~v~ 337 (782)
.+|++++ +.+++++++ +|+||||||..... .........|+.++.+++++|++. + .+++++||+.++
T Consensus 37 ~~Dl~~~------~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~ss~~~~ 108 (298)
T d1n2sa_ 37 CGDFSNP------KGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-G-AWVVHYSTDYVF 108 (298)
T ss_dssp CCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-T-CEEEEEEEGGGS
T ss_pred cCcCCCH------HHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcc-c-cccccccccccc
Confidence 4788776 778888775 49999999976543 345567899999999999999875 3 578899999887
Q ss_pred cCCC--cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeEEec
Q psy16243 338 CRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 338 ~~~~--~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v~G~ 415 (782)
+... +..|..... +.+.|+.+|..+|..+..+.. ...++|++..++.
T Consensus 109 ~~~~~~~~~E~~~~~-----------------------------p~~~y~~~k~~~e~~~~~~~~--~~~~~~~~~~~~~ 157 (298)
T d1n2sa_ 109 PGTGDIPWQETDATS-----------------------------PLNVYGKTKLAGEKALQDNCP--KHLIFRTSWVYAG 157 (298)
T ss_dssp CCCTTCCBCTTSCCC-----------------------------CSSHHHHHHHHHHHHHHHHCS--SEEEEEECSEECS
T ss_pred cCCCCCCCccccccC-----------------------------CCchHhhhhhhhhhhHHhhhc--ccccccccceeec
Confidence 6543 444542211 127899999999999987743 2355665555542
Q ss_pred cCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCceeeeccCCCccccccchhHHHHHHHHhhhhcccc
Q psy16243 416 NKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLLRSMHADPELVADMVPADNVINCIISAAWNVHQT 495 (782)
Q Consensus 416 ~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 495 (782)
... .+ ...+...+..+..... .+....++++++|+++++..++......
T Consensus 158 ~~~-----------------------~~------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~~~~~~i~~~~~~ 206 (298)
T d1n2sa_ 158 KGN-----------------------NF------AKTMLRLAKERQTLSV--INDQYGAPTGAELLADCTAHAIRVALNK 206 (298)
T ss_dssp SSC-----------------------CH------HHHHHHHHHHCSEEEE--ECSCEECCEEHHHHHHHHHHHHHHHHHC
T ss_pred cCC-----------------------cc------chhhhhhhcccceeec--ccceeecccccchHHHHHHHHHhhhhcc
Confidence 111 10 0112222233332222 3457789999999999988776542111
Q ss_pred chhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhcccc
Q psy16243 496 WNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPE 548 (782)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~ 548 (782)
....++||++++ +.+++.++++.+.+..+.
T Consensus 207 ---------------------~~~~~~~n~~~~--~~~~~~~~~~~i~~~~~~ 236 (298)
T d1n2sa_ 207 ---------------------PEVAGLYHLVAG--GTTTWHDYAALVFDEARK 236 (298)
T ss_dssp ---------------------GGGCEEEECCCB--SCEEHHHHHHHHHHHHHH
T ss_pred ---------------------ccccccccccCC--CceecHHHHHHHHhhhhc
Confidence 235789999998 889999999988876554
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.24 E-value=2.4e-11 Score=129.58 Aligned_cols=234 Identities=15% Similarity=0.066 Sum_probs=151.4
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+|+|||.+|+.|..+ .+.|+. .+++|++++|..++....+ +.
T Consensus 2 ~kktIlVtGatG~iG~~l----v~~Ll~---------------~G~~V~~l~R~~~~~~~~~-~~--------------- 46 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASL----IRVAAA---------------VGHHVRAQVHSLKGLIAEE-LQ--------------- 46 (350)
T ss_dssp CCCCEEEESTTSHHHHHH----HHHHHH---------------TTCCEEEEESCSCSHHHHH-HH---------------
T ss_pred CCCEEEEECCChHHHHHH----HHHHHh---------------CCCeEEEEECCcchhhhhh-hc---------------
Confidence 368999999544444333 233322 2688999999755432211 11
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHccCCceEEEEe
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKSFVHVS 332 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~~~~~~fV~vS 332 (782)
...+++++.||+.++ .+.++.++.+++++++...... ..|+.++++++++|.+. +++++++.|
T Consensus 47 --~~~~v~~~~gD~~d~-----~~~~~~a~~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~a-gv~~~v~~S 109 (350)
T d1xgka_ 47 --AIPNVTLFQGPLLNN-----VPLMDTLFEGAHLAFINTTSQA---------GDEIAIGKDLADAAKRA-GTIQHYIYS 109 (350)
T ss_dssp --TSTTEEEEESCCTTC-----HHHHHHHHTTCSEEEECCCSTT---------SCHHHHHHHHHHHHHHH-SCCSEEEEE
T ss_pred --ccCCCEEEEeeCCCc-----HHHHHHHhcCCceEEeeccccc---------chhhhhhhHHHHHHHHh-CCCceEEEe
Confidence 124789999999986 2457788888999888764322 24677789999999998 778888888
Q ss_pred cceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcCCCCcEEEecCCeE
Q psy16243 333 TAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIV 412 (782)
Q Consensus 333 T~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~~glp~~IvRp~~v 412 (782)
|........ . .....|..+|...|..+.+. +++.+++||+..
T Consensus 110 s~~~~~~~~---------------------------------~---~~~~~~~~~k~~~~~~~~~~--~~~~~~vr~~~~ 151 (350)
T d1xgka_ 110 SMPDHSLYG---------------------------------P---WPAVPMWAPKFTVENYVRQL--GLPSTFVYAGIY 151 (350)
T ss_dssp ECCCGGGTS---------------------------------S---CCCCTTTHHHHHHHHHHHTS--SSCEEEEEECEE
T ss_pred eccccccCC---------------------------------c---ccchhhhhhHHHHHHHHHhh--ccCceeeeecee
Confidence 865332211 0 11156778899999887654 688999999988
Q ss_pred EeccCCCCcccccccCCcccccccCCCcccccccccchhhHHHHhhcCce-eeeccCCCccccccch-hHHHHHHHHhhh
Q psy16243 413 IATNKEPIPGWINNHYGPTVIATNKEPIPGWINNHYGPTGIVAGAGLGLL-RSMHADPELVADMVPA-DNVINCIISAAW 490 (782)
Q Consensus 413 ~G~~~~p~~g~~~~~~~P~~~~~n~~~~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~VpV-Ddva~aii~a~~ 490 (782)
++....+..+ ..... ....|.. ...+.+++....++++ +|++.++..++.
T Consensus 152 ~~~~~~~~~~-------------------~~~~~---------~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~ 203 (350)
T d1xgka_ 152 NNNFTSLPYP-------------------LFQME---------LMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFK 203 (350)
T ss_dssp GGGCBSSSCS-------------------SCBEE---------ECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHH
T ss_pred eccccccccc-------------------ccccc---------ccccccceeeecccCCCcceEEEeHHHHHHHHHHHHh
Confidence 7643222110 00000 0111211 1344567777787775 799998888775
Q ss_pred hccccchhhhhcccccccccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHhccccc
Q psy16243 491 NVHQTWNEKKAAGKLVADSLDKNYPDDTDIEIYNYVSSTQKPIKWKEFMALNEKAVPEI 549 (782)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~~t~~el~~~i~~~~~~~ 549 (782)
.... ...+.+|++++ ..+|+.|+++.+.+.+|+.
T Consensus 204 ~~~~----------------------~~~G~~~~~~g---~~~T~~eia~~l~~~~G~~ 237 (350)
T d1xgka_ 204 DGPQ----------------------KWNGHRIALTF---ETLSPVQVCAAFSRALNRR 237 (350)
T ss_dssp HCHH----------------------HHTTCEEEECS---EEECHHHHHHHHHHHHTSC
T ss_pred CChh----------------------hcCCeEEEEeC---CcCCHHHHHHHHHHHHCCc
Confidence 4211 12477899876 3589999999999998864
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.77 E-value=4.9e-08 Score=98.73 Aligned_cols=167 Identities=14% Similarity=0.147 Sum_probs=111.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+ |+..+.-+.|... +.+|+++.|........+.+...
T Consensus 3 l~gK~vlITGgs~----GIG~~~A~~la~~---------------G~~vii~~r~~~~~~~~~~~~~~------------ 51 (254)
T d1sbya1 3 LTNKNVIFVAALG----GIGLDTSRELVKR---------------NLKNFVILDRVENPTALAELKAI------------ 51 (254)
T ss_dssp CTTCEEEEETTTS----HHHHHHHHHHHHT---------------CCSEEEEEESSCCHHHHHHHHHH------------
T ss_pred CCCCEEEEecCCC----HHHHHHHHHHHHC---------------CCEEEEEECCcccHHHHHHHHhh------------
Confidence 4589999999643 3422223444322 67788888875543322222221
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh-------cCceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHH-c-
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV-------DNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKE-M- 322 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~-------~~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~-~- 322 (782)
....++.++..|++.+. ++.++++ ..+|++||+|+... .+.++..+++|+.|+.++..++.. +
T Consensus 52 --~~~~~~~~~~~d~~~~~-----~~~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~ 123 (254)
T d1sbya1 52 --NPKVNITFHTYDVTVPV-----AESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWD 123 (254)
T ss_dssp --CTTSEEEEEECCTTSCH-----HHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHC
T ss_pred --CCCCCEEEEEeecCCCH-----HHHHHHHHHHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence 11247889999998541 3343333 35799999999765 578889999999999999887543 2
Q ss_pred ----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 323 ----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 323 ----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
+...++|++||....... + ....|+.||+....+.+..
T Consensus 124 ~~~~~~~g~Ii~isS~~~~~~~---------------------------------~-----~~~~Y~asKaal~~~t~~l 165 (254)
T d1sbya1 124 KRKGGPGGIIANICSVTGFNAI---------------------------------H-----QVPVYSASKAAVVSFTNSL 165 (254)
T ss_dssp GGGTCCCEEEEEECCGGGTSCC---------------------------------T-----TSHHHHHHHHHHHHHHHHH
T ss_pred hcccCCCceEEEEechhhccCC---------------------------------C-----CCHHHHHHHHHHHHHHHHH
Confidence 123569999987654221 0 1157999999988887766
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..|+.+..+.||.|..+
T Consensus 166 a~el~~~gIrVn~I~PG~v~T~ 187 (254)
T d1sbya1 166 AKLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp HHHHHHHSEEEEEEEECSEESH
T ss_pred HhhccccCeEEEEEEeCCCcCc
Confidence 34899999999988754
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.77 E-value=1.1e-07 Score=95.44 Aligned_cols=163 Identities=19% Similarity=0.210 Sum_probs=109.6
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ -+.|.+. +.+|++..|... ..++..+++
T Consensus 4 L~gK~alITGas~GIG~ai----a~~la~~---------------G~~V~~~~r~~~--~~~~~~~~~------------ 50 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASH----VRAMVAE---------------GAKVVFGDILDE--EGKAMAAEL------------ 50 (244)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHHT---------------TCEEEEEESCHH--HHHHHHHHT------------
T ss_pred cCCCEEEEeCCCCHHHHHH----HHHHHHC---------------CCEEEEEECCHH--HHHHHHHHh------------
Confidence 4689999999644333322 3444332 667888777532 222222221
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+..+.+
T Consensus 51 ----~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~ 120 (244)
T d1nffa_ 51 ----ADAARYVHLDVTQP------AQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR 120 (244)
T ss_dssp ----GGGEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----hCcceEEEeecCCH------HHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHH
Confidence 23678899999997 67666554 47999999997543 14566789999999999887
Q ss_pred HHH-Hc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAK-EM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~-~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+. .+ ++-.++|++||........ ....|+.||+..+.+
T Consensus 121 ~~~~~m~~~~~G~Ii~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l 162 (244)
T d1nffa_ 121 AVVKPMKEAGRGSIINISSIEGLAGTV--------------------------------------ACHGYTATKFAVRGL 162 (244)
T ss_dssp HHHHHHHHHTCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHH
T ss_pred HHHhHHHhcCcceEEeccccccccccc--------------------------------------cccchhhHHHHHHHH
Confidence 642 22 2346899999987542210 015799999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..+.||.+-.+
T Consensus 163 tk~lA~el~~~gIrVN~I~PG~i~T~ 188 (244)
T d1nffa_ 163 TKSTALELGPSGIRVNSIHPGLVKTP 188 (244)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBCSG
T ss_pred HHHHHHHhcccCEEEEEEeeCCccCh
Confidence 8766 35899999999877543
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.75 E-value=2e-07 Score=94.03 Aligned_cols=162 Identities=19% Similarity=0.140 Sum_probs=110.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|. +.-+.|... +.+|++..|... ...+..+++
T Consensus 3 L~gK~alVTGas~GIG~----aia~~la~~---------------Ga~V~~~~r~~~--~~~~~~~~~------------ 49 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGA----EAARQAVAA---------------GARVVLADVLDE--EGAATAREL------------ 49 (254)
T ss_dssp CCCSEEEEETTTSHHHH----HHHHHHHHT---------------TCEEEEEESCHH--HHHHHHHTT------------
T ss_pred CCCCEEEEeCcCCHHHH----HHHHHHHHC---------------CCEEEEEECCHH--HHHHHHHHh------------
Confidence 56899999996433332 223444322 567888877532 222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++.+++++ .+|++||+|+..... +.++..+++|+.|+..+.+
T Consensus 50 ----~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~ 119 (254)
T d1hdca_ 50 ----GDAARYQHLDVTIE------EDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK 119 (254)
T ss_dssp ----GGGEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----CCceEEEEcccCCH------HHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHH
Confidence 24688999999987 77776654 579999999875321 4456789999999999988
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+-.++|++||.+...... ....|+.||...+.+
T Consensus 120 ~~~p~m~~~~~G~II~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l 161 (254)
T d1hdca_ 120 TVIPAMKDAGGGSIVNISSAAGLMGLA--------------------------------------LTSSYGASKWGVRGL 161 (254)
T ss_dssp HHHHHHHHHTCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCeecccccchhccccc--------------------------------------chhhHHHHHHHHHHH
Confidence 75321 2457999999986542210 116899999999988
Q ss_pred HHHc-----CCCCcEEEecCCeEEe
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G 414 (782)
.+.. ..|+.+..+.||.|..
T Consensus 162 t~~lA~e~a~~gIrVN~I~PG~v~T 186 (254)
T d1hdca_ 162 SKLAAVELGTDRIRVNSVHPGMTYT 186 (254)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred HHHHHHHhCCCceEEEEeeeCcccC
Confidence 8765 3588999998887754
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=98.72 E-value=1.8e-07 Score=94.01 Aligned_cols=164 Identities=14% Similarity=0.142 Sum_probs=109.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|.. .-+.|... +.+|++..|.... ...+.+++.
T Consensus 3 L~gKvalVTGas~GIG~a----ia~~la~~---------------Ga~V~~~~~~~~~-~~~~~~~~~------------ 50 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRA----IAERFAVE---------------GADIAIADLVPAP-EAEAAIRNL------------ 50 (247)
T ss_dssp TTTCEEEEETTTSHHHHH----HHHHHHHT---------------TCEEEEEESSCCH-HHHHHHHHT------------
T ss_pred CCCCEEEEeCCCCHHHHH----HHHHHHHC---------------CCEEEEEECCchH-HHHHHHHHc------------
Confidence 458999999964433332 23444332 5677777775432 222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
-.++..+.+|++++ ++.+.+++ .+|++||+|+..... +.++..+++|+.|+..+.+
T Consensus 51 ----g~~~~~~~~Dvs~~------~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~ 120 (247)
T d2ew8a1 51 ----GRRVLTVKCDVSQP------GDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 120 (247)
T ss_dssp ----TCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----CCcEEEEEeeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHH
Confidence 24788999999998 77776654 579999999975321 4566789999999999888
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+-.++|++||.+..... +....|+.||...+.+
T Consensus 121 ~~~~~m~~~~~G~Iv~isS~~~~~~~--------------------------------------~~~~~Y~asKaal~~l 162 (247)
T d2ew8a1 121 AFVPGMKRNGWGRIINLTSTTYWLKI--------------------------------------EAYTHYISTKAANIGF 162 (247)
T ss_dssp HHHHHHHHHTCEEEEEECCGGGGSCC--------------------------------------SSCHHHHHHHHHHHHH
T ss_pred HHHhHHHhcCCCCccccccchhcccC--------------------------------------cccccchhhhccHHHH
Confidence 75321 245689999998653221 0115799999999888
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..+.||.+-.+
T Consensus 163 tk~lA~ela~~gIrVN~I~PG~i~T~ 188 (247)
T d2ew8a1 163 TRALASDLGKDGITVNAIAPSLVRTA 188 (247)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCC---
T ss_pred HHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 7765 35899999999887654
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.69 E-value=2e-07 Score=93.97 Aligned_cols=167 Identities=18% Similarity=0.185 Sum_probs=109.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|.. .-+.|... +.+|.+..|... ...+..+++.+
T Consensus 3 l~gK~~lITGas~GIG~a----ia~~la~~---------------Ga~V~i~~r~~~--~~~~~~~~l~~---------- 51 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFG----IAQGLAEA---------------GCSVVVASRNLE--EASEAAQKLTE---------- 51 (251)
T ss_dssp CTTCEEEEETTTSHHHHH----HHHHHHHT---------------TCEEEEEESCHH--HHHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCCHHHHH----HHHHHHHC---------------CCEEEEEECCHH--HHHHHHHHHHH----------
Confidence 458999999964333322 23444322 677888877532 22222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..-.++..+.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+..+.+
T Consensus 52 --~~g~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~ 123 (251)
T d1vl8a_ 52 --KYGVETMAFRCDVSNY------EEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCR 123 (251)
T ss_dssp --HHCCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred --HhCCcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhh
Confidence 1123788899999987 77766654 57999999997432 14556789999999999988
Q ss_pred HHHH-c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKE-M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~-~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+.. + .+-.++|++||........ +....|+.||...+.+
T Consensus 124 ~~~~~m~~~~~G~Ii~i~S~~~~~~~~-------------------------------------~~~~~Y~asKaal~~l 166 (251)
T d1vl8a_ 124 EAFSLLRESDNPSIINIGSLTVEEVTM-------------------------------------PNISAYAASKGGVASL 166 (251)
T ss_dssp HHHHHHTTCSSCEEEEECCGGGTCCCS-------------------------------------SSCHHHHHHHHHHHHH
T ss_pred hhhhcccccccccccccccchhccccC-------------------------------------ccccchHHHHHhHHHH
Confidence 7543 3 2345899998864321100 0015799999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEe
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G 414 (782)
.+.. ..|+.+..+.||.+-.
T Consensus 167 t~~lA~e~~~~gIrVN~I~PG~i~T 191 (251)
T d1vl8a_ 167 TKALAKEWGRYGIRVNVIAPGWYRT 191 (251)
T ss_dssp HHHHHHHHGGGTCEEEEEEECCBCS
T ss_pred HHHHHHHhcccCeEEEEEeeCcccC
Confidence 8765 3589999999987754
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=98.69 E-value=1.9e-07 Score=94.61 Aligned_cols=167 Identities=19% Similarity=0.167 Sum_probs=109.9
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
++.+|+++|||..+ |+..+.-+.|.+ ++.+|++..|.... ..++..+++.+
T Consensus 4 dL~gK~alITGas~----GIG~aia~~la~---------------~G~~Vv~~~r~~~~-~~~~~~~~~~~--------- 54 (261)
T d1geea_ 4 DLEGKVVVITGSST----GLGKSMAIRFAT---------------EKAKVVVNYRSKED-EANSVLEEIKK--------- 54 (261)
T ss_dssp GGTTCEEEETTCSS----HHHHHHHHHHHH---------------TTCEEEEEESSCHH-HHHHHHHHHHH---------
T ss_pred CCCCCEEEEeCCCc----HHHHHHHHHHHH---------------CCCEEEEEeCCcHH-HHHHHHHHHHh---------
Confidence 46699999999643 332222344432 26788888886421 12222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Ll 316 (782)
.-.++..+.+|++++ ++.+++++ .+|++||+|+..... +.++..+++|+.|+..+.
T Consensus 55 ----~g~~~~~~~~Dvt~~------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~ 124 (261)
T d1geea_ 55 ----VGGEAIAVKGDVTVE------SDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124 (261)
T ss_dssp ----TTCEEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ----cCCcEEEEEccCCCH------HHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHH
Confidence 123688899999998 77776664 579999999875321 445678999999998888
Q ss_pred HHHH----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMAK----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
+.+. +.+.-..+|++||.+..... +....|+.||...+
T Consensus 125 ~~~~~~m~~~~~g~~Iv~isS~~~~~~~--------------------------------------~~~~~Y~asKaal~ 166 (261)
T d1geea_ 125 REAIKYFVENDIKGTVINMSSVHEKIPW--------------------------------------PLFVHYAASKGGMK 166 (261)
T ss_dssp HHHHHHHHHTTCCCEEEEECCGGGTSCC--------------------------------------TTCHHHHHHHHHHH
T ss_pred HHHhhhhccccccccccccccchhcccC--------------------------------------ccccccccCCccch
Confidence 7743 22233458899987643211 01157999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
.+.+.. ..|+.+..+.||.|..
T Consensus 167 ~lt~~lA~e~~~~gIrVN~I~PG~v~T 193 (261)
T d1geea_ 167 LMTETLALEYAPKGIRVNNIGPGAINT 193 (261)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred hhHHHHHHHhhhhCcEEEEEeeCcCcC
Confidence 888765 4589999999987754
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.68 E-value=2.5e-07 Score=92.62 Aligned_cols=160 Identities=16% Similarity=0.143 Sum_probs=106.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|. +.-+.|.+. +.+|++..|... ++++..+
T Consensus 3 L~gK~~lITGas~GIG~----aia~~l~~~---------------G~~V~~~~r~~~------~l~~~~~---------- 47 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGR----ATLELFAKE---------------GARLVACDIEEG------PLREAAE---------- 47 (242)
T ss_dssp TTTCEEEEESTTSHHHH----HHHHHHHHT---------------TCEEEEEESCHH------HHHHHHH----------
T ss_pred CCCCEEEEeCCCCHHHH----HHHHHHHHC---------------CCEEEEEECCHH------HHHHHHH----------
Confidence 35899999996443333 323444332 667888877532 2222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
..+..++.+|++++ ++.+++++ .+|++||+|+..... +.++..+++|+.|+..+.+
T Consensus 48 ----~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~ 117 (242)
T d1ulsa_ 48 ----AVGAHPVVMDVADP------ASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAK 117 (242)
T ss_dssp ----TTTCEEEECCTTCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HcCCeEEEEecCCH------HHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhh
Confidence 01456789999987 77776654 479999999974321 4566789999999999988
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+-..++.+||.+..+.+. ...|+.||..-+.+
T Consensus 118 ~~~~~m~~~~~~~i~~~ss~~~~~~~~---------------------------------------~~~Y~asKaal~~l 158 (242)
T d1ulsa_ 118 AASEAMREKNPGSIVLTASRVYLGNLG---------------------------------------QANYAASMAGVVGL 158 (242)
T ss_dssp HHHHHHTTTCCEEEEEECCGGGGCCTT---------------------------------------CHHHHHHHHHHHHH
T ss_pred hccccccccccceeeeeccccccCCCC---------------------------------------CcchHHHHHHHHHH
Confidence 75432 2345667777754322210 15799999999988
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..+.||.+-.+
T Consensus 159 tk~lA~ela~~gIrVN~I~PG~v~T~ 184 (242)
T d1ulsa_ 159 TRTLALELGRWGIRVNTLAPGFIETR 184 (242)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred HHHHHHHHhhhCcEEEEEeeCcccCh
Confidence 8765 35899999999887643
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=2.1e-07 Score=94.01 Aligned_cols=165 Identities=19% Similarity=0.175 Sum_probs=109.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ -+.|.+ ++.+|++..|... ..++..+++.+
T Consensus 9 L~gK~alITGas~GIG~ai----a~~la~---------------~Ga~V~~~~r~~~--~~~~~~~~l~~---------- 57 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEI----AITFAT---------------AGASVVVSDINAD--AANHVVDEIQQ---------- 57 (255)
T ss_dssp CTTCEEEETTTTSHHHHHH----HHHHHT---------------TTCEEEEEESCHH--HHHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCcHHHHHH----HHHHHH---------------CCCEEEEEECCHH--HHHHHHHHHHH----------
Confidence 4689999999644333322 333432 2678888887532 22222333221
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc------hhhHHHHHHhhHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF------DAHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f------~~~~~~~~~~Nv~gt~~Lle~ 318 (782)
.-.++.++.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+..+.+.
T Consensus 58 ---~g~~~~~~~~Dvs~~------~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~ 128 (255)
T d1fmca_ 58 ---LGGQAFACRCDITSE------QELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQL 128 (255)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred ---cCCcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHH
Confidence 123688899999997 67666554 57999999987432 245667899999999998876
Q ss_pred HHH-c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 319 AKE-M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 319 a~~-~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
+.. + .+-.++|++||.+...... ....|+.||..-+.+.
T Consensus 129 ~~~~m~~~~~g~Ii~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt 170 (255)
T d1fmca_ 129 VAPEMEKNGGGVILTITSMAAENKNI--------------------------------------NMTSYASSKAAASHLV 170 (255)
T ss_dssp HHHHHHHHTCEEEEEECCGGGTCCCT--------------------------------------TCHHHHHHHHHHHHHH
T ss_pred HHhhhccccccccccccccchhcccc--------------------------------------ccccchhHHHHHHHHH
Confidence 432 1 2345789999876543210 1158999999999888
Q ss_pred HHc-----CCCCcEEEecCCeEEe
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G 414 (782)
+.. ..|+.+..+.||.|-.
T Consensus 171 ~~lA~el~~~gIrVN~I~PG~i~T 194 (255)
T d1fmca_ 171 RNMAFDLGEKNIRVNGIAPGAILT 194 (255)
T ss_dssp HHHHHHHHTTTEEEEEEEECSBCS
T ss_pred HHHHHHhCccCeEEEEeeeCcCcC
Confidence 765 4589999999987754
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.64 E-value=1.9e-07 Score=94.56 Aligned_cols=166 Identities=17% Similarity=0.163 Sum_probs=109.5
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHH-Hhhccccccccccc
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAK-EMKQLKFFDPMRKR 251 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~-~~~~~~~f~~l~~~ 251 (782)
.+|+++|||..+..|. +.-+.|.++ +.+|++..|.... ..+.+. ++..
T Consensus 3 ~gK~alITGas~GIG~----aiA~~la~~---------------Ga~V~~~~r~~~~--~~~~~~~~~~~---------- 51 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGL----GIATALAAQ---------------GADIVLNGFGDAA--EIEKVRAGLAA---------- 51 (260)
T ss_dssp TTCEEEETTCSSHHHH----HHHHHHHHT---------------TCEEEEECCSCHH--HHHHHHHHHHH----------
T ss_pred CcCEEEEeCCCCHHHH----HHHHHHHHC---------------CCEEEEEeCCcHH--HHHHHHHHHHH----------
Confidence 5899999996433332 223444322 6678888775321 112222 1111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..-.++.++.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+..+.+
T Consensus 52 --~~g~~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~ 123 (260)
T d1x1ta1 52 --QHGVKVLYDGADLSKG------EAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTA 123 (260)
T ss_dssp --HHTSCEEEECCCTTSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred --hcCCcEEEEECCCCCH------HHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccc
Confidence 1124788999999998 77777665 47999999997432 14566789999999988877
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+--++|++||.+.....+ ....|+.||...+.+
T Consensus 124 ~~~~~m~~~~~G~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l 165 (260)
T d1x1ta1 124 AALPHMKKQGFGRIINIASAHGLVASA--------------------------------------NKSAYVAAKHGVVGF 165 (260)
T ss_dssp HHHHHHHHHTCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHH
T ss_pred hhhhhHhhcCCceEeecccccceeccC--------------------------------------CcchhhhhhhhHHHh
Confidence 74321 2446899999986543210 115799999999988
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..+.||.|-.+
T Consensus 166 t~~lA~el~~~gIrVN~I~PG~i~T~ 191 (260)
T d1x1ta1 166 TKVTALETAGQGITANAICPGWVRTP 191 (260)
T ss_dssp HHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred HHHHHHHhchhCcEEEEEecCCCCCh
Confidence 8765 45899999999987643
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.61 E-value=5.3e-07 Score=90.31 Aligned_cols=162 Identities=18% Similarity=0.176 Sum_probs=110.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|. +.-+.|.+. +.+|++..|... ++++..+
T Consensus 5 L~GK~~lITGas~GIG~----aia~~la~~---------------G~~V~~~~r~~~------~l~~~~~---------- 49 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGR----GTVQALHAT---------------GARVVAVSRTQA------DLDSLVR---------- 49 (244)
T ss_dssp CTTCEEEEESTTSHHHH----HHHHHHHHT---------------TCEEEEEESCHH------HHHHHHH----------
T ss_pred CCCCEEEEeCCCCHHHH----HHHHHHHHc---------------CCEEEEEECCHH------HHHHHHH----------
Confidence 46899999996443332 223444322 677888877532 2222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcC---ceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN---IHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~---vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
...++..+.+|++++ ++.+++++. +|++||+|+..... +.++..+++|+.|+..+.+.+..
T Consensus 50 ---~~~~~~~~~~Dv~d~------~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~ 120 (244)
T d1pr9a_ 50 ---ECPGIEPVCVDLGDW------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVAR 120 (244)
T ss_dssp ---HSTTCEEEECCTTCH------HHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ---hcCCCeEEEEeCCCH------HHHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhh
Confidence 013567888999987 778887774 69999999875322 45667899999999888886542
Q ss_pred -c---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 322 -M---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 322 -~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
+ ++-.++|++||.+.....+ ....|+.||...+.+.+.
T Consensus 121 ~~~~~~~~g~Ii~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~ 162 (244)
T d1pr9a_ 121 GLIARGVPGAIVNVSSQCSQRAVT--------------------------------------NHSVYCSTKGALDMLTKV 162 (244)
T ss_dssp HHHHHTCCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCcceEeeccccccccccc--------------------------------------chhhhhhhHHHHHHHHHH
Confidence 2 2456899999987543211 115799999999988876
Q ss_pred c-----CCCCcEEEecCCeEEec
Q psy16243 398 G-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G~ 415 (782)
. ..|+.+..+.||.|..+
T Consensus 163 lA~el~~~gIrvN~I~PG~v~T~ 185 (244)
T d1pr9a_ 163 MALELGPHKIRVNAVNPTVVMTS 185 (244)
T ss_dssp HHHHHGGGTEEEEEEEECCBCSH
T ss_pred HHHHhCCCcEEEEEEeeCcCcCh
Confidence 5 35899999999877643
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.60 E-value=4.5e-07 Score=91.25 Aligned_cols=166 Identities=14% Similarity=0.169 Sum_probs=110.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+.+|..+ -+.|.+ .+.+|++..|... ...+..+++.+
T Consensus 8 lenKvalITGas~GIG~a~----a~~la~---------------~Ga~V~~~~r~~~--~l~~~~~~l~~---------- 56 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREI----AKMLAK---------------SVSHVICISRTQK--SCDSVVDEIKS---------- 56 (251)
T ss_dssp CSSCEEEEESTTSHHHHHH----HHHHTT---------------TSSEEEEEESSHH--HHHHHHHHHHT----------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHH---------------cCCEEEEEECCHH--HHHHHHHHHHh----------
Confidence 4589999999644333222 334432 2678888887532 22222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
.-.++..+.+|++++ ++.+++++ .+|++||+|+..... +.++..+++|+.|+..+.+
T Consensus 57 ---~g~~~~~~~~Dvt~~------~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~ 127 (251)
T d2c07a1 57 ---FGYESSGYAGDVSKK------EEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 127 (251)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHH
T ss_pred ---cCCcEEEEEccCCCH------HHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhh
Confidence 123688999999998 77776665 579999999874321 4566789999999988888
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+-.++|++||.+...... ....|+.||+..+.+
T Consensus 128 ~~~~~m~~~~~G~IVnisS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l 169 (251)
T d2c07a1 128 PISKRMINNRYGRIINISSIVGLTGNV--------------------------------------GQANYSSSKAGVIGF 169 (251)
T ss_dssp HHHHHHHHHTCEEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHH
T ss_pred hcCcccccCCCeEEEEECCHHhcCCCC--------------------------------------CCHHHHHHHHHHHHH
Confidence 64321 2457899999986542110 015799999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..+.||.|-.+
T Consensus 170 tr~lA~el~~~gIrVN~V~PG~v~T~ 195 (251)
T d2c07a1 170 TKSLAKELASRNITVNAIAPGFISSD 195 (251)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCC-
T ss_pred HHHHHHHhhhhCeEEEEEccCCEecc
Confidence 8776 35899999999887643
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.60 E-value=3.4e-07 Score=91.69 Aligned_cols=161 Identities=19% Similarity=0.177 Sum_probs=108.3
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..| .+.-+.|.. ++.+|++..|... .+++..+
T Consensus 3 l~GK~alITGas~GIG----~aia~~la~---------------~Ga~V~~~~r~~~------~l~~~~~---------- 47 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIG----RDTVKALHA---------------SGAKVVAVTRTNS------DLVSLAK---------- 47 (242)
T ss_dssp CTTCEEEEESTTSHHH----HHHHHHHHH---------------TTCEEEEEESCHH------HHHHHHH----------
T ss_pred CCCCEEEEeCCCcHHH----HHHHHHHHH---------------CCCEEEEEECCHH------HHHHHHH----------
Confidence 4589999999643333 222344432 2677888877532 2222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcC---ceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN---IHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~---vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
...++..+.+|++++ ++.++++++ +|++||+|+.... .+.++..+++|+.|+..+.+.+..
T Consensus 48 ---~~~~~~~~~~Dv~~~------~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~ 118 (242)
T d1cyda_ 48 ---ECPGIEPVCVDLGDW------DATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVAR 118 (242)
T ss_dssp ---HSTTCEEEECCTTCH------HHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ---hcCCCeEEEEeCCCH------HHHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhch
Confidence 013577889999987 778888774 6999999997532 144667899999999999886532
Q ss_pred ----ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH
Q psy16243 322 ----MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 397 (782)
Q Consensus 322 ----~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~ 397 (782)
.+.-.++|++||.......+ ....|+.||...+.+.+.
T Consensus 119 ~~~~~~~~g~ii~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~ 160 (242)
T d1cyda_ 119 DMINRGVPGSIVNVSSMVAHVTFP--------------------------------------NLITYSSTKGAMTMLTKA 160 (242)
T ss_dssp HHHHHTCCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHH
T ss_pred hhhhhcccCcccccchhhccccCC--------------------------------------ccccccchHHHHHHHHHH
Confidence 12345899999986443210 015799999999998877
Q ss_pred c-----CCCCcEEEecCCeEEe
Q psy16243 398 G-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 398 ~-----~~glp~~IvRp~~v~G 414 (782)
. ..|+.+..+.||.+-.
T Consensus 161 lA~e~~~~gIrvN~I~PG~i~T 182 (242)
T d1cyda_ 161 MAMELGPHKIRVNSVNPTVVLT 182 (242)
T ss_dssp HHHHHGGGTEEEEEEEECCBTT
T ss_pred HHHHhCccCeecccCCCCCccC
Confidence 6 3588988888877653
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.59 E-value=8.2e-07 Score=90.20 Aligned_cols=166 Identities=20% Similarity=0.189 Sum_probs=109.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|.++ -+.|.+. +.+|++..|... ..++..+++.
T Consensus 4 L~gKvalITGas~GIG~ai----a~~la~~---------------Ga~V~i~~r~~~--~~~~~~~~l~----------- 51 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETT----AKLFVRY---------------GAKVVIADIADD--HGQKVCNNIG----------- 51 (268)
T ss_dssp TTTCEEEEESTTSHHHHHH----HHHHHHT---------------TCEEEEEESCHH--HHHHHHHHHC-----------
T ss_pred CCCCEEEEeCCCcHHHHHH----HHHHHHC---------------CCEEEEEECCHH--HHHHHHHHhc-----------
Confidence 4589999999644333332 3444322 677888777532 2222222221
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC-----ch----hhHHHHHHhhHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR-----FD----AHLKVAVSINLRATKAL 315 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~-----f~----~~~~~~~~~Nv~gt~~L 315 (782)
...++.++.+|++++ ++++.+++ .+|++||+|+... +. +.++..+++|+.|+..+
T Consensus 52 ---~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~ 122 (268)
T d2bgka1 52 ---SPDVISFVHCDVTKD------EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122 (268)
T ss_dssp ---CTTTEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHH
T ss_pred ---CCCceEEEEccCCCH------HHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhh
Confidence 123577899999998 77777664 5799999998632 11 34567889999999999
Q ss_pred HHHHHH-c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 316 LEMAKE-M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 316 le~a~~-~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+.+.. + .+-.++|++||........ +....|+.||...+
T Consensus 123 ~~~~~~~m~~~~~g~ii~iss~~~~~~~~-------------------------------------~~~~~Y~asKaal~ 165 (268)
T d2bgka1 123 AKHAARVMIPAKKGSIVFTASISSFTAGE-------------------------------------GVSHVYTATKHAVL 165 (268)
T ss_dssp HHHHHHHHGGGTCEEEEEECCGGGTCCCT-------------------------------------TSCHHHHHHHHHHH
T ss_pred hhhhcchHhhcCCCCcccccccccccccc-------------------------------------ccccccchhHHHHH
Confidence 887543 2 2446889998876432210 01147999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+.+..+.||.+-.+
T Consensus 166 ~lt~~lA~el~~~gIrVN~I~PG~i~T~ 193 (268)
T d2bgka1 166 GLTTSLCTELGEYGIRVNCVSPYIVASP 193 (268)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESCCSCC
T ss_pred hCHHHHHHHhChhCeEEEecCCCCccCh
Confidence 888765 35899999999887654
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.58 E-value=1.5e-07 Score=94.38 Aligned_cols=162 Identities=15% Similarity=0.189 Sum_probs=108.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+ |+..+.-+.|.+ ++.+|++..|... ..++..+++
T Consensus 2 l~gK~alITGas~----GIG~a~a~~l~~---------------~G~~Vv~~~r~~~--~l~~~~~~~------------ 48 (243)
T d1q7ba_ 2 FEGKIALVTGASR----GIGRAIAETLAA---------------RGAKVIGTATSEN--GAQAISDYL------------ 48 (243)
T ss_dssp CTTCEEEESSCSS----HHHHHHHHHHHH---------------TTCEEEEEESSHH--HHHHHHHHH------------
T ss_pred CCCCEEEEeCCCC----HHHHHHHHHHHH---------------cCCEEEEEeCCHH--HHHHHHHHh------------
Confidence 4689999999643 332222334432 2677887777532 122222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
..+...+.+|++++ ++.+++++ .+|++||+|+..... +.++..+++|+.|+..+.+
T Consensus 49 ----~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~ 118 (243)
T d1q7ba_ 49 ----GANGKGLMLNVTDP------ASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 118 (243)
T ss_dssp ----GGGEEEEECCTTCH------HHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----CCCCcEEEEEecCH------HHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHH
Confidence 13577889999987 67666655 479999999874321 4566789999999999888
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+-.++|++||.......+ ....|+.||...+.+
T Consensus 119 ~~~~~m~~~~~G~II~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l 160 (243)
T d1q7ba_ 119 AVMRAMMKKRHGRIITIGSVVGTMGNG--------------------------------------GQANYAAAKAGLIGF 160 (243)
T ss_dssp HHHHHHHHHTCEEEEEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEeeeecchhhcCCCC--------------------------------------CCHHHHHHHHHHHHH
Confidence 76321 2456899999986542210 016799999999998
Q ss_pred HHHc-----CCCCcEEEecCCeEEe
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G 414 (782)
.+.. ..|+.+..+.||.+-.
T Consensus 161 t~~lA~ela~~gIrVN~I~PG~i~T 185 (243)
T d1q7ba_ 161 SKSLAREVASRGITVNVVAPGFIET 185 (243)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred HHHHHHHhCccCeEEEEEecceEec
Confidence 8765 3589999999987754
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.58 E-value=1.2e-07 Score=95.15 Aligned_cols=165 Identities=17% Similarity=0.139 Sum_probs=107.6
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
...+|+++|||..+..| .+.-+.|.+ .+.+|++..|... ...+..+++..
T Consensus 4 ~l~Gkv~lITGas~GIG----~~ia~~la~---------------~G~~V~l~~r~~~--~l~~~~~~~~~--------- 53 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIG----RLTAYEFAK---------------LKSKLVLWDINKH--GLEETAAKCKG--------- 53 (244)
T ss_dssp CCTTCEEEEETTTSHHH----HHHHHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHHH---------
T ss_pred CCCCCEEEEeCCCcHHH----HHHHHHHHH---------------CCCEEEEEECCHH--HHHHHHHHHHh---------
Confidence 35689999999643333 232344432 2678898888643 12222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Ll 316 (782)
.-.++..+.+|++++ ++.+.+++ .+|++||+|+..... +.++..+++|+.|+.++.
T Consensus 54 ----~~~~~~~~~~Dvs~~------~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 123 (244)
T d1yb1a_ 54 ----LGAKVHTFVVDCSNR------EDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 123 (244)
T ss_dssp ----TTCCEEEEECCTTCH------HHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHH
T ss_pred ----cCCcEEEEEeeCCCH------HHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHH
Confidence 124788999999998 66666554 479999999975332 335578899999999988
Q ss_pred HHHHH-c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKE-M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~-~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+.. + .+-.++|++||....... +. ...|+.||+.-+.
T Consensus 124 ~~~lp~m~~~~~G~Iv~isS~~~~~~~---~~-----------------------------------~~~Y~asKaal~~ 165 (244)
T d1yb1a_ 124 KAFLPAMTKNNHGHIVTVASAAGHVSV---PF-----------------------------------LLAYCSSKFAAVG 165 (244)
T ss_dssp HHHHHHHHHTTCEEEEEECCCC-CCCH---HH-----------------------------------HHHHHHHHHHHHH
T ss_pred HHHhhhHHhcCCceEEEeecchhcCCC---CC-----------------------------------cHHHHHHHHHHHH
Confidence 86432 1 245689999998754220 00 1579999998877
Q ss_pred HHHHcC--------CCCcEEEecCCeEE
Q psy16243 394 MVRRGG--------AGMPVAMVRPSIVI 413 (782)
Q Consensus 394 ll~~~~--------~glp~~IvRp~~v~ 413 (782)
+.+... .|+.+..+.||.|-
T Consensus 166 ~~~~La~El~~~~~~gI~V~~i~PG~v~ 193 (244)
T d1yb1a_ 166 FHKTLTDELAALQITGVKTTCLCPNFVN 193 (244)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEEEETHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEEEEcCCCC
Confidence 776541 47888888887663
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.57 E-value=1.4e-07 Score=94.18 Aligned_cols=155 Identities=18% Similarity=0.181 Sum_probs=106.0
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
|.+.+|+++|||..+..|. +.-+.|.++ +.+|++..|...
T Consensus 3 psl~gK~~lITGas~GIG~----aia~~la~~---------------Ga~V~~~~r~~~--------------------- 42 (237)
T d1uzma1 3 PPFVSRSVLVTGGNRGIGL----AIAQRLAAD---------------GHKVAVTHRGSG--------------------- 42 (237)
T ss_dssp CCCCCCEEEETTTTSHHHH----HHHHHHHHT---------------TCEEEEEESSSC---------------------
T ss_pred CCCCCCEEEEeCCCCHHHH----HHHHHHHHC---------------CCEEEEEECCcc---------------------
Confidence 5678999999996443332 223444332 667888777532
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHH
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKAL 315 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~L 315 (782)
...++..+.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+..+
T Consensus 43 -----~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~ 111 (237)
T d1uzma1 43 -----APKGLFGVEVDVTDS------DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRV 111 (237)
T ss_dssp -----CCTTSEEEECCTTCH------HHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHH
T ss_pred -----hhcCceEEEEecCCH------HHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhh
Confidence 123567789999987 66666554 47999999997432 245667899999998888
Q ss_pred HHHH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 316 LEMA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 316 le~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
.+.+ ++. +-.++|++||.+..... +....|+.||+..
T Consensus 112 ~~~~~~~m~~~-~~g~Iv~isS~~~~~~~--------------------------------------~~~~~Y~asKaal 152 (237)
T d1uzma1 112 AQRASRSMQRN-KFGRMIFIGSVSGLWGI--------------------------------------GNQANYAASKAGV 152 (237)
T ss_dssp HHHHHHHHHHT-TCEEEEEECCCCC-------------------------------------------CCHHHHHHHHHH
T ss_pred hhhhhhccccc-CCCceEEEcchhhccCC--------------------------------------cccHHHHHHHHHH
Confidence 7653 332 45689999998654221 0115799999999
Q ss_pred HHHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 392 EDMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 392 E~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+.+.+.. ..|+.+..+.||.+..
T Consensus 153 ~~lt~~lA~e~~~~gIrVN~I~PG~v~T 180 (237)
T d1uzma1 153 IGMARSIARELSKANVTANVVAPGYIDT 180 (237)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred HHHHHHHHhhhhcCCceeeeeeeCcCCC
Confidence 9887765 3588999999987764
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=98.57 E-value=2.3e-07 Score=93.23 Aligned_cols=159 Identities=19% Similarity=0.150 Sum_probs=107.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|.. .-+.|.++ +.+|++..|.... .+..++.
T Consensus 3 l~GK~alITGas~GIG~a----ia~~la~~---------------G~~V~~~~~~~~~---~~~~~~~------------ 48 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRA----IAQAFARE---------------GALVALCDLRPEG---KEVAEAI------------ 48 (248)
T ss_dssp TTTCEEEEETTTSHHHHH----HHHHHHHT---------------TCEEEEEESSTTH---HHHHHHH------------
T ss_pred cCCCEEEEeCCCCHHHHH----HHHHHHHC---------------CCEEEEEECCHHH---HHHHHHc------------
Confidence 458999999964433332 23444332 5678777776432 2222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
+..++.+|++++ ++.+++++ .+|++||+|+..... +.++..+++|+.|+.++.+
T Consensus 49 ------~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~ 116 (248)
T d2d1ya1 49 ------GGAFFQVDLEDE------RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSA 116 (248)
T ss_dssp ------TCEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ------CCeEEEEeCCCH------HHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhh
Confidence 335678999987 67666654 479999999975321 4466789999999999988
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
++... .+-.++|++||.+...... ....|+.||+..+.+
T Consensus 117 ~~~p~m~~~~~G~Ii~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l 158 (248)
T d2d1ya1 117 LAAREMRKVGGGAIVNVASVQGLFAEQ--------------------------------------ENAAYNASKGGLVNL 158 (248)
T ss_dssp HHHHHHHTTTCEEEEEECCGGGTSBCT--------------------------------------TBHHHHHHHHHHHHH
T ss_pred hhccccccccccccccccccccccccc--------------------------------------ccchhHHHHHHHHHH
Confidence 86432 2346899999986542210 116799999999988
Q ss_pred HHHc-----CCCCcEEEecCCeEEe
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G 414 (782)
.+.. ..|+.+..+.||.+-.
T Consensus 159 tk~lA~el~~~gIrVN~I~PG~v~T 183 (248)
T d2d1ya1 159 TRSLALDLAPLRIRVNAVAPGAIAT 183 (248)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred HHHHHHHhhhhCcEEEEEeeCCCCC
Confidence 7765 3589999999887754
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.57 E-value=4.8e-07 Score=93.39 Aligned_cols=170 Identities=14% Similarity=0.173 Sum_probs=109.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ .+.|... +.+|++..|... ...+..+++... +.
T Consensus 10 L~gKvalITGas~GIG~ai----a~~la~~---------------Ga~Vvi~~r~~~--~l~~~~~el~~~--~~----- 61 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAI----VKELLEL---------------GSNVVIASRKLE--RLKSAADELQAN--LP----- 61 (297)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHHT---------------TCEEEEEESCHH--HHHHHHHHHHHT--SC-----
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHHC---------------CCEEEEEECCHH--HHHHHHHHHHhh--hc-----
Confidence 5689999999644333322 3344322 677888887632 122222222110 00
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
.....++..+.+|++++ ++.+.+++ .+|++||+|+.... .+.++..+++|+.|+..+.+
T Consensus 62 -~~~~~~~~~~~~Dvs~~------~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~ 134 (297)
T d1yxma1 62 -PTKQARVIPIQCNIRNE------EEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCK 134 (297)
T ss_dssp -TTCCCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred -cccCceEEEEeccCCCH------HHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHH
Confidence 11234789999999998 77766654 57999999986432 14566789999999999888
Q ss_pred HHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 318 MAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 318 ~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
.+... .+-.++|.+||+...+.+ ....|+.||...+.+
T Consensus 135 ~~~~~m~~~~~g~Ii~~ss~~~~~~~---------------------------------------~~~~Y~asKaal~~l 175 (297)
T d1yxma1 135 AVYSSWMKEHGGSIVNIIVPTKAGFP---------------------------------------LAVHSGAARAGVYNL 175 (297)
T ss_dssp HHHHHTHHHHCEEEEEECCCCTTCCT---------------------------------------TCHHHHHHHHHHHHH
T ss_pred HHHHhhcccccccccccccccccccc---------------------------------------ccccchhHHHHHHHH
Confidence 76422 234567777664322211 116799999999988
Q ss_pred HHHc-----CCCCcEEEecCCeEEec
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.. ..|+.+..+.||.|..+
T Consensus 176 tk~lA~el~~~gIrVN~I~PG~i~T~ 201 (297)
T d1yxma1 176 TKSLALEWACSGIRINCVAPGVIYSQ 201 (297)
T ss_dssp HHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred HHHHHHHhcccCceEEEeeeCcCcCc
Confidence 8765 35899999999887653
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.55 E-value=3.5e-07 Score=92.48 Aligned_cols=166 Identities=17% Similarity=0.204 Sum_probs=110.6
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ -+.|..+ +.+|++..|... ..++..+++.+
T Consensus 4 L~gK~alITGas~GIG~ai----a~~la~~---------------G~~V~i~~r~~~--~l~~~~~~~~~---------- 52 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAI----VEELAGL---------------GARVYTCSRNEK--ELDECLEIWRE---------- 52 (258)
T ss_dssp CTTCEEEEESCSSHHHHHH----HHHHHHT---------------TCEEEEEESCHH--HHHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHHC---------------CCEEEEEECCHH--HHHHHHHHHHh----------
Confidence 4589999999654444333 3344322 567888887632 22232222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc--------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD--------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~--------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++++++++ .+|+++|+|+.... .+.++..+++|+.++..+.
T Consensus 53 ---~~~~~~~~~~D~s~~------~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~ 123 (258)
T d1ae1a_ 53 ---KGLNVEGSVCDLLSR------TERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 123 (258)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---cCCCceEEEeecCCH------HHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccc
Confidence 124678899999987 66655443 36999999987532 2456678999999999988
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+++... ++..++|++||.......+ ....|+.+|..-+.
T Consensus 124 ~~~~~~m~~~~~g~ii~isS~~~~~~~~--------------------------------------~~~~Y~~sK~al~~ 165 (258)
T d1ae1a_ 124 QIAYPLLKASQNGNVIFLSSIAGFSALP--------------------------------------SVSLYSASKGAINQ 165 (258)
T ss_dssp HHHHHHHHHHTSEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccc--------------------------------------cchhHHHHHHHHHH
Confidence 875421 3567899999987642210 11689999999998
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+.+..+.||.+..+
T Consensus 166 lt~~lA~el~~~gIrvN~I~PG~i~T~ 192 (258)
T d1ae1a_ 166 MTKSLACEWAKDNIRVNSVAPGVILTP 192 (258)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBC--
T ss_pred HHHHHHHhcCcCcEEEEEEeeCcccCc
Confidence 88766 35899999999888654
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.54 E-value=6.1e-07 Score=89.63 Aligned_cols=114 Identities=16% Similarity=0.217 Sum_probs=83.3
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+..+.+.+...
T Consensus 57 ~~~~~~~~Dvt~~------~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 130 (240)
T d2bd0a1 57 ALTDTITADISDM------ADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL 130 (240)
T ss_dssp CEEEEEECCTTSH------HHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCH------HHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHH
Confidence 3678899999998 77766554 47999999997532 2456678999999999888875321
Q ss_pred ---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 ---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 ---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+-.++|++||.+..... | ....|+.||+..+.+.+..
T Consensus 131 m~~~~~G~Ii~isS~~~~~~~---------------------------------~-----~~~~Y~asK~al~~lt~~la 172 (240)
T d2bd0a1 131 MERQHSGHIFFITSVAATKAF---------------------------------R-----HSSIYCMSKFGQRGLVETMR 172 (240)
T ss_dssp HHHHTCEEEEEECCGGGTSCC---------------------------------T-----TCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCceEEEechhhcCCC---------------------------------C-----CChHHHHHHHHHHHHHHHHH
Confidence 244689999998654221 0 1157999999888877665
Q ss_pred ----CCCCcEEEecCCeEEe
Q psy16243 399 ----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G 414 (782)
..|+.+..+.||.|-.
T Consensus 173 ~el~~~gIrvn~i~PG~v~T 192 (240)
T d2bd0a1 173 LYARKCNVRITDVQPGAVYT 192 (240)
T ss_dssp HHHTTTTEEEEEEEECCBCS
T ss_pred HHhCcCCeEEEEeeeCcccC
Confidence 3588888888887753
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.54 E-value=1.9e-07 Score=95.89 Aligned_cols=114 Identities=11% Similarity=0.102 Sum_probs=84.4
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhcC-----ceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHH-c-
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVDN-----IHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKE-M- 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~~-----vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~-~- 322 (782)
.++..+.+|++++ ++.+.+++. +|+++|+|+..... +.++..+++|+.|+.++.+++.. +
T Consensus 57 ~~~~~~~~Dv~~~------~~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~ 130 (285)
T d1jtva_ 57 GSLETLQLDVRDS------KSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMK 130 (285)
T ss_dssp TSEEEEECCTTCH------HHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEeccccch------HhhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHH
Confidence 4799999999998 777777653 69999999875332 44567889999999988887432 1
Q ss_pred -cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---
Q psy16243 323 -KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--- 398 (782)
Q Consensus 323 -~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--- 398 (782)
.+-.++|++||.+..... +....|+.||+..+.+.+..
T Consensus 131 ~~~~G~Iv~isS~~g~~~~--------------------------------------~~~~~Y~asKaal~~l~~~la~E 172 (285)
T d1jtva_ 131 RRGSGRVLVTGSVGGLMGL--------------------------------------PFNDVYCASKFALEGLCESLAVL 172 (285)
T ss_dssp HHTCEEEEEEEEGGGTSCC--------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCceEEEechhhcCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHH
Confidence 245789999998653221 11157999999988887665
Q ss_pred --CCCCcEEEecCCeEEe
Q psy16243 399 --GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 --~~glp~~IvRp~~v~G 414 (782)
..|+.+..+.||.|--
T Consensus 173 l~~~gIrVn~V~PG~v~T 190 (285)
T d1jtva_ 173 LLPFGVHLSLIECGPVHT 190 (285)
T ss_dssp HGGGTEEEEEEEECCBCC
T ss_pred hhccCcEEEEEecCCCCC
Confidence 3589999999988753
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.54 E-value=3.2e-07 Score=92.64 Aligned_cols=163 Identities=19% Similarity=0.170 Sum_probs=107.1
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+..|. +.-+.|.+. +.+|++..|... ..++..+++.+
T Consensus 1 KKValITGas~GIG~----aia~~la~~---------------Ga~V~~~~r~~~--~l~~~~~~i~~------------ 47 (255)
T d1gega_ 1 KKVALVTGAGQGIGK----AIALRLVKD---------------GFAVAIADYNDA--TAKAVASEINQ------------ 47 (255)
T ss_dssp CCEEEEETTTSHHHH----HHHHHHHHT---------------TCEEEEEESCHH--HHHHHHHHHHH------------
T ss_pred CCEEEEcCCccHHHH----HHHHHHHHC---------------CCEEEEEECCHH--HHHHHHHHHHh------------
Confidence 478899996433332 223344322 667888777532 22222222211
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
.-.++.++.+|++++ ++.+++++ .+|++||+||.... .+.++..+++|+.|+..+.+.+
T Consensus 48 -~g~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~ 120 (255)
T d1gega_ 48 -AGGHAVAVKVDVSDR------DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAA 120 (255)
T ss_dssp -TTCCEEEEECCTTSH------HHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred -cCCcEEEEEeeCCCH------HHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhh
Confidence 123788999999998 77766654 47999999987432 1446678999999999988774
Q ss_pred H----HccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 320 K----EMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 320 ~----~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
. +.++-.++|++||.......+ ....|+.||..-+.+.
T Consensus 121 ~~~m~~~~~~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt 162 (255)
T d1gega_ 121 VEAFKKEGHGGKIINACSQAGHVGNP--------------------------------------ELAVYSSSKFAVRGLT 162 (255)
T ss_dssp HHHHHHHTSCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHH
T ss_pred cchhhhhccccccccccchhhcccCc--------------------------------------ccccchhCHHHHHhhH
Confidence 3 223456799999876432210 1157999999999888
Q ss_pred HHc-----CCCCcEEEecCCeEEe
Q psy16243 396 RRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 396 ~~~-----~~glp~~IvRp~~v~G 414 (782)
+.. ..|+.+..+.||.+-.
T Consensus 163 k~lA~el~~~gIrVN~I~PG~i~T 186 (255)
T d1gega_ 163 QTAARDLAPLGITVNGYCPGIVKT 186 (255)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBSS
T ss_pred HHHHHHhhhhCcEEEEEecCcccC
Confidence 765 3589999999987753
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.54 E-value=2.1e-07 Score=94.07 Aligned_cols=165 Identities=20% Similarity=0.252 Sum_probs=111.0
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccc-eeeeeeccc-chhhHHHHHHHhhccccccccccc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHL-KVAVSINLR-ATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~-~i~~LvR~~-~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+++++|||..+.+|. +.-+.|... +. +|.++.|.. +.....+.++++..
T Consensus 9 ~gt~lVTGgs~GIG~----a~a~~la~~---------------Ga~~vvl~~R~~~~~~~~~~~~~~l~~---------- 59 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGG----QIARWLARR---------------GAPHLLLVSRSGPDADGAGELVAELEA---------- 59 (259)
T ss_dssp CSEEEEETTTSHHHH----HHHHHHHHH---------------TCSEEEEEESSGGGSTTHHHHHHHHHH----------
T ss_pred cCEEEEECCCcHHHH----HHHHHHHHC---------------CCCEEEEEeCCccCHHHHHHHHHHHHh----------
Confidence 579999996443332 223444322 33 466666652 33334444443321
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcC------ceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDN------IHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEM 318 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~------vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~ 318 (782)
.-.++.++.+|++++ ++.+.+++. +|.|+|+|+..... +.++..+++|+.|+.++.++
T Consensus 60 ---~g~~v~~~~~Dv~d~------~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~ 130 (259)
T d2fr1a1 60 ---LGARTTVAACDVTDR------ESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHEL 130 (259)
T ss_dssp ---TTCEEEEEECCTTCH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHH
T ss_pred ---ccccccccccccchH------HHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHH
Confidence 124789999999998 777777653 58999999975432 33456788999999999988
Q ss_pred HHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 319 AKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 319 a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
+... +..++|++||........ + ...|+.+|...|.+....
T Consensus 131 ~~~~-~~~~iv~~SS~a~~~g~~---------------------------------~-----~~~YaAaka~l~~la~~~ 171 (259)
T d2fr1a1 131 TREL-DLTAFVLFSSFASAFGAP---------------------------------G-----LGGYAPGNAYLDGLAQQR 171 (259)
T ss_dssp HTTS-CCSEEEEEEEHHHHTCCT---------------------------------T-----CTTTHHHHHHHHHHHHHH
T ss_pred hhcc-CCceEeeecchhhccCCc---------------------------------c-----cHHHHHHHHhHHHHHHHH
Confidence 7765 678899999986542210 0 157999999999988776
Q ss_pred -CCCCcEEEecCCeEEec
Q psy16243 399 -GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -~~glp~~IvRp~~v~G~ 415 (782)
..|++++.+.||.+.++
T Consensus 172 ~~~Gi~v~~I~pg~~~~~ 189 (259)
T d2fr1a1 172 RSDGLPATAVAWGTWAGS 189 (259)
T ss_dssp HHTTCCCEEEEECCBC--
T ss_pred HhCCCCEEECCCCcccCC
Confidence 56999999999877653
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.53 E-value=7.1e-07 Score=89.74 Aligned_cols=165 Identities=18% Similarity=0.179 Sum_probs=108.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ -+.|.+. +.+|++..|... ..++..+++ +
T Consensus 4 L~gK~alVTGas~GIG~ai----a~~la~~---------------Ga~V~~~~r~~~--~~~~~~~~~-~---------- 51 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAI----ATKFVEE---------------GAKVMITGRHSD--VGEKAAKSV-G---------- 51 (251)
T ss_dssp TTTCEEEETTTTSHHHHHH----HHHHHHT---------------TCEEEEEESCHH--HHHHHHHHH-C----------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHHC---------------CCEEEEEECCHH--HHHHHHHHh-C----------
Confidence 5689999999644333322 3344322 677888877532 222222222 1
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
...++.++.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+..+.+
T Consensus 52 ---~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~ 122 (251)
T d1zk4a1 52 ---TPDQIQFFQHDSSDE------DGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122 (251)
T ss_dssp ---CTTTEEEEECCTTCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---CCCcEEEEEccCCCH------HHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHH
Confidence 123788999999998 77666554 46999999987432 14466789999999999988
Q ss_pred HHHH-cc--CC-ceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAKE-MK--QL-KSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~~-~~--~~-~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+.. +. +- .++|++||.+..... +....|+.||...+.
T Consensus 123 ~~~~~m~~~~~gg~Ii~isS~~~~~~~--------------------------------------~~~~~Y~asKaal~~ 164 (251)
T d1zk4a1 123 LGIQRMKNKGLGASIINMSSIEGFVGD--------------------------------------PSLGAYNASKGAVRI 164 (251)
T ss_dssp HHHHHHTTSSSCEEEEEECCGGGTSCC--------------------------------------TTCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCceEeeeccceeccC--------------------------------------CCchhHHHHHHHHhc
Confidence 7532 22 22 378999997643210 011579999999888
Q ss_pred HHHHc-------CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-------GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-------~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+.+..+.||.|-.+
T Consensus 165 lt~~lA~e~~l~~~gIrVN~I~PG~i~T~ 193 (251)
T d1zk4a1 165 MSKSAALDCALKDYDVRVNTVHPGYIKTP 193 (251)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEECCBCCH
T ss_pred chHHHHHHHhcCCCcEEEEEEeCCCCCCh
Confidence 76642 34889999999887643
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.52 E-value=7e-07 Score=90.25 Aligned_cols=166 Identities=15% Similarity=0.185 Sum_probs=103.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+.+|. +.-+.|.+. +.+|++..|... ...+..+++..
T Consensus 6 LkgK~alVTGas~GIG~----aiA~~la~~---------------Ga~V~~~~r~~~--~l~~~~~~~~~---------- 54 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGH----AIVEEFAGF---------------GAVIHTCARNEY--ELNECLSKWQK---------- 54 (259)
T ss_dssp CTTCEEEETTTTSHHHH----HHHHHHHHT---------------TCEEEEEESCHH--HHHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCCHHHH----HHHHHHHHC---------------CCEEEEEECCHH--HHHHHHHHHHh----------
Confidence 46899999996443332 223444322 567888877532 22222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc--------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD--------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~--------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Ll 316 (782)
...++..+.+|++++ ++.+.+++ .+|+++|+|+.... .+.++..+++|+.|+..+.
T Consensus 55 ---~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~ 125 (259)
T d1xq1a_ 55 ---KGFQVTGSVCDASLR------PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLS 125 (259)
T ss_dssp ---TTCCEEEEECCTTSH------HHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---cCCceEEEeccCCCH------HHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeee
Confidence 123788999999987 66554442 47999999997532 2456678999999999988
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+... .+--++|++||....... +....|+.||...+.
T Consensus 126 ~~~~~~m~~~~~G~Iv~isS~~~~~~~--------------------------------------~~~~~Y~asKaal~~ 167 (259)
T d1xq1a_ 126 QLAHPLLKASGCGNIIFMSSIAGVVSA--------------------------------------SVGSIYSATKGALNQ 167 (259)
T ss_dssp HHHHHHHHHHSSCEEEEEC------------------------------------------------CCHHHHHHHHHHH
T ss_pred hhhhhcccccccccccccccccccccc--------------------------------------cccccccccccchhh
Confidence 875431 245689999997653211 011579999999998
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+.+..+-||.|-.+
T Consensus 168 lt~~lA~e~~~~gIrVN~V~PG~i~T~ 194 (259)
T d1xq1a_ 168 LARNLACEWASDGIRANAVAPAVIATP 194 (259)
T ss_dssp HHHHHHHHHGGGTCEEEEEECCSCC--
T ss_pred hhHHHHHHhcccCeEEEEeccCcccCH
Confidence 88765 45899999999887543
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.51 E-value=4.6e-07 Score=91.55 Aligned_cols=167 Identities=17% Similarity=0.155 Sum_probs=109.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ -+.|.. ++.+|++..|.... .++...++.+.
T Consensus 2 l~gK~alITGas~GIG~ai----a~~la~---------------~Ga~V~i~~r~~~~--l~~~~~~~~~~--------- 51 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRAT----AVRLAA---------------EGAKLSLVDVSSEG--LEASKAAVLET--------- 51 (258)
T ss_dssp CTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHHH--HHHHHHHHHHH---------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEECCHHH--HHHHHHHHHhh---------
Confidence 4589999999643333222 333332 26788888875431 22222222110
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----ch----hhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----FD----AHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f~----~~~~~~~~~Nv~gt~~Ll 316 (782)
....++..+.+|++++ ++.+.+++ .+|++||+||... +. +.++..+++|+.|+..+.
T Consensus 52 --~~~~~~~~~~~Dvt~~------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~ 123 (258)
T d1iy8a_ 52 --APDAEVLTTVADVSDE------AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGL 123 (258)
T ss_dssp --CTTCCEEEEECCTTSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHH
T ss_pred --CCCCeEEEEeccCCCH------HHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhh
Confidence 0124788999999998 77766654 4799999998532 21 345678999999999998
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+... ++-.++|++||.+.....+ ....|+.||...+.
T Consensus 124 ~~~~~~m~~~~~G~Ii~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~ 165 (258)
T d1iy8a_ 124 EKVLKIMREQGSGMVVNTASVGGIRGIG--------------------------------------NQSGYAAAKHGVVG 165 (258)
T ss_dssp HHHHHHHHHHTCCEEEEECCGGGTSBCS--------------------------------------SBHHHHHHHHHHHH
T ss_pred hhhHhhhhhhcCCCCcccccHhhccCCC--------------------------------------CchHHHHHHHHHHH
Confidence 875321 2456899999986532110 01689999999988
Q ss_pred HHHHc-----CCCCcEEEecCCeEEe
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+.+.. ..|+.+..+.||.+..
T Consensus 166 lt~~lA~el~~~gIrVN~i~PG~v~T 191 (258)
T d1iy8a_ 166 LTRNSAVEYGRYGIRINAIAPGAIWT 191 (258)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred HHHHHHHHhCccCceEEEEeeCcccC
Confidence 88765 3589999999988764
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.50 E-value=8.9e-07 Score=89.71 Aligned_cols=169 Identities=17% Similarity=0.204 Sum_probs=105.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ -+.|... +.+|++..|... ...+..+++...
T Consensus 3 l~gKvalVTGas~GIG~ai----a~~la~~---------------Ga~V~~~~r~~~--~l~~~~~~l~~~--------- 52 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRAT----AVLFARE---------------GAKVTITGRHAE--RLEETRQQILAA--------- 52 (264)
T ss_dssp TTTCEEEETTTTSHHHHHH----HHHHHHT---------------TCEEEEEESCHH--HHHHHHHHHHHT---------
T ss_pred CCCCEEEEeCcCCHHHHHH----HHHHHHC---------------CCEEEEEECCHH--HHHHHHHHHHhc---------
Confidence 4589999999654433332 3444322 677888887532 122222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----------hhhHHHHHHhhHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----------DAHLKVAVSINLRATK 313 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----------~~~~~~~~~~Nv~gt~ 313 (782)
.....++.++.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+.
T Consensus 53 -~~~~~~~~~~~~Dvt~~------~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~ 125 (264)
T d1spxa_ 53 -GVSEQNVNSVVADVTTD------AGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 125 (264)
T ss_dssp -TCCGGGEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHH
T ss_pred -CCCcCceEEEEccCCCH------HHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHH
Confidence 11134789999999988 77776665 47999999986311 1345678899999998
Q ss_pred HHHHHHHHc--cCCceEEEEeccee-ccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 314 ALLEMAKEM--KQLKSFVHVSTAYS-NCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 314 ~Lle~a~~~--~~~~~fV~vST~~v-~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
.+.+.+... ++-..+|.++|... .... | ....|+.||..
T Consensus 126 ~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~---------------------------------~-----~~~~Y~asKaa 167 (264)
T d1spxa_ 126 ALTKKAVPHLSSTKGEIVNISSIASGLHAT---------------------------------P-----DFPYYSIAKAA 167 (264)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCTTSSSSCC---------------------------------T-----TSHHHHHHHHH
T ss_pred HHHhhhCCccccccCcceeeeeeccccccC---------------------------------C-----Cchhhhhhhhh
Confidence 888875432 12245666665432 2110 0 01569999999
Q ss_pred HHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 391 AEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 391 aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
-+.+.+.. ..|+.+..+.||.|-.+
T Consensus 168 l~~lt~~lA~el~~~gIrVN~V~PG~v~T~ 197 (264)
T d1spxa_ 168 IDQYTRNTAIDLIQHGIRVNSISPGLVATG 197 (264)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBCCC
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 98888765 35899999999887543
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.49 E-value=4e-07 Score=91.96 Aligned_cols=163 Identities=19% Similarity=0.166 Sum_probs=108.4
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
+|+++|||..+..|..+ -+.|..+ +.+|++..|... ..++..+++.+
T Consensus 2 gKValITGas~GIG~ai----a~~la~~---------------Ga~V~i~~r~~~--~l~~~~~~l~~------------ 48 (257)
T d2rhca1 2 SEVALVTGATSGIGLEI----ARRLGKE---------------GLRVFVCARGEE--GLRTTLKELRE------------ 48 (257)
T ss_dssp CCEEEEESCSSHHHHHH----HHHHHHT---------------TCEEEEEESCHH--HHHHHHHHHHH------------
T ss_pred CCEEEEeCCCCHHHHHH----HHHHHHC---------------CCEEEEEECCHH--HHHHHHHHHHh------------
Confidence 68999999644333322 3344322 677888777532 22222233221
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
.-.++.++.+|++++ ++.+.+++ .+|++||+|+.... .+.++..+++|+.|+..+.+.+
T Consensus 49 -~g~~~~~~~~Dvs~~------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~ 121 (257)
T d2rhca1 49 -AGVEADGRTCDVRSV------PEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQV 121 (257)
T ss_dssp -TTCCEEEEECCTTCH------HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred -cCCcEEEEEeecCCH------HHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHH
Confidence 123688999999998 77766654 47999999997432 1456678999999999999987
Q ss_pred HHc-----cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 320 KEM-----KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 320 ~~~-----~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
... .+-.++|.+||.......+ ....|+.||...+.+
T Consensus 122 ~p~~~~~~~~~g~Ii~i~S~~~~~~~~--------------------------------------~~~~Y~asKaal~~l 163 (257)
T d2rhca1 122 LKAGGMLERGTGRIVNIASTGGKQGVV--------------------------------------HAAPYSASKHGVVGF 163 (257)
T ss_dssp HTTTSHHHHTEEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHH
T ss_pred hHHHHHHhcCCcccccccccccccccc--------------------------------------cchhHHHHHHHHHHH
Confidence 531 2346789998876532210 115799999999888
Q ss_pred HHHc-----CCCCcEEEecCCeEEe
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G 414 (782)
.+.. ..|+.+..+.||.|-.
T Consensus 164 tk~lA~el~~~gIrVN~I~PG~i~T 188 (257)
T d2rhca1 164 TKALGLELARTGITVNAVCPGFVET 188 (257)
T ss_dssp HHHHHHHTTTSEEEEEEEEECSBCS
T ss_pred HHHHHHHhhhhCcEEEEEeeCCCCC
Confidence 8765 3478888888887753
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.48 E-value=1.4e-06 Score=87.78 Aligned_cols=167 Identities=17% Similarity=0.155 Sum_probs=106.6
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.-|.|. +.-+.|.+. +.+|.+..|..+.... .++...
T Consensus 6 L~gK~alITGas~~~GIG~--aiA~~la~~---------------Ga~V~i~~~~~~~~~~---~~~~~~---------- 55 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGF--AIAAKLKEA---------------GAEVALSYQAERLRPE---AEKLAE---------- 55 (256)
T ss_dssp CTTCEEEEESCCCSSSHHH--HHHHHHHHT---------------TCEEEEEESSGGGHHH---HHHHHH----------
T ss_pred CCCCEEEEECCCCCchHHH--HHHHHHHHC---------------CCEEEEEeCcHHHHHH---HHHhhh----------
Confidence 4689999999655434333 333444332 5667666665432222 222111
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC-------ch----hhHHHHHHhhHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR-------FD----AHLKVAVSINLRATK 313 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~-------f~----~~~~~~~~~Nv~gt~ 313 (782)
...+..++.+|++++ ++.+++++ .+|++||+|+... +. +.+...+++|+.++.
T Consensus 56 ---~~~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~ 126 (256)
T d1ulua_ 56 ---ALGGALLFRADVTQD------EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLV 126 (256)
T ss_dssp ---HTTCCEEEECCTTCH------HHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred ---ccCcccccccccCCH------HHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHH
Confidence 113567889999997 77776654 5799999998632 11 234467889999999
Q ss_pred HHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 314 ALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 314 ~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+.+.+... .+-.++|++||....... +....|+.||...+
T Consensus 127 ~~~~~~~~~~~~~G~Iv~isS~~~~~~~--------------------------------------~~~~~Y~asKaal~ 168 (256)
T d1ulua_ 127 AVARRAEPLLREGGGIVTLTYYASEKVV--------------------------------------PKYNVMAIAKAALE 168 (256)
T ss_dssp HHHHHHTTTEEEEEEEEEEECGGGTSBC--------------------------------------TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCEEEEEeehHhcCCC--------------------------------------CCchHHHHHHHHHH
Confidence 988876532 222578999987654221 01167999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+.+..+.||.+..+
T Consensus 169 ~ltr~lA~ela~~gIrVN~I~PG~i~t~ 196 (256)
T d1ulua_ 169 ASVRYLAYELGPKGVRVNAISAGPVRTV 196 (256)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCC---
T ss_pred HHHHHHHHHhcccCCEEeeeccceeeec
Confidence 988765 45899999999987654
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.47 E-value=5.6e-07 Score=90.80 Aligned_cols=163 Identities=16% Similarity=0.156 Sum_probs=109.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|.. .-+.|... +.+|++..|... ..++..+++
T Consensus 3 L~gK~alVTGas~GIG~a----ia~~la~~---------------Ga~V~~~~r~~~--~l~~~~~~~------------ 49 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRA----FAEAYVRE---------------GARVAIADINLE--AARATAAEI------------ 49 (256)
T ss_dssp TTTEEEEEETCSSHHHHH----HHHHHHHT---------------TEEEEEEESCHH--HHHHHHHHH------------
T ss_pred CCCCEEEEeCCCCHHHHH----HHHHHHHC---------------CCEEEEEECCHH--HHHHHHHHh------------
Confidence 358999999964433332 23444322 567777777532 222222221
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
..++..+.+|++++ ++++++++ .+|++||+|+..... +.++..+++|+.|+..+.+
T Consensus 50 ----~~~~~~~~~Dvt~~------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~ 119 (256)
T d1k2wa_ 50 ----GPAACAIALDVTDQ------ASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQ 119 (256)
T ss_dssp ----CTTEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----CCceEEEEeeCCCH------HHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchh
Confidence 23678899999988 77776654 479999999975422 4466789999999999887
Q ss_pred HHH-H---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 318 MAK-E---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 318 ~a~-~---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
.+. . .++--++|++||....... +....|+.||...+.
T Consensus 120 ~~~~~~~~~~~~g~Iv~isS~~~~~~~--------------------------------------~~~~~Y~asKaal~~ 161 (256)
T d1k2wa_ 120 AVARAMIAGGRGGKIINMASQAGRRGE--------------------------------------ALVGVYCATKAAVIS 161 (256)
T ss_dssp HHHHHHHHHTSCEEEEEECCGGGTSCC--------------------------------------TTCHHHHHHHHHHHH
T ss_pred hccchhHHhccCCccccccchhhcccc--------------------------------------ccccchhhhhhHHHH
Confidence 633 2 1234689999998654221 011689999999998
Q ss_pred HHHHc-----CCCCcEEEecCCeEEec
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.. ..|+.+..+.||.+-.+
T Consensus 162 lt~~lA~el~~~gIrVN~V~PG~i~T~ 188 (256)
T d1k2wa_ 162 LTQSAGLNLIRHGINVNAIAPGVVDGE 188 (256)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCCT
T ss_pred HHHHHHHHhcccCeEEEEEecCCCCch
Confidence 88765 35899999999876643
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.47 E-value=4.2e-07 Score=91.98 Aligned_cols=165 Identities=16% Similarity=0.179 Sum_probs=109.6
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|.. .-+.|... +.+|++..|... ...+..+++.+
T Consensus 3 L~gK~alITGas~GIG~a----ia~~la~~---------------Ga~V~~~~r~~~--~l~~~~~~~~~---------- 51 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLA----TALRLAEE---------------GTAIALLDMNRE--ALEKAEASVRE---------- 51 (260)
T ss_dssp TTTCEEEEETTTSHHHHH----HHHHHHHT---------------TCEEEEEESCHH--HHHHHHHHHHT----------
T ss_pred CCCCEEEEeCCCCHHHHH----HHHHHHHC---------------CCEEEEEECCHH--HHHHHHHHHHh----------
Confidence 458999999964433322 23344322 678888877532 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----ch----hhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----FD----AHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f~----~~~~~~~~~Nv~gt~~Ll 316 (782)
.-.++..+.+|++++ ++.+++++ .+|++||+||... +. +.++..+++|+.|+..+.
T Consensus 52 ---~g~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~ 122 (260)
T d1zema1 52 ---KGVEARSYVCDVTSE------EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 122 (260)
T ss_dssp ---TTSCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---cCCcEEEEEccCCCH------HHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccch
Confidence 123788999999987 66666654 4799999998642 21 345578899999999988
Q ss_pred HHHHH-c--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKE-M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~-~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+.. + .+--++|++||.+.....+ . ...|+.||...+.
T Consensus 123 ~~~~~~m~~~~~G~II~isS~~~~~~~~---------------------------------~-----~~~Y~asKaal~~ 164 (260)
T d1zema1 123 KAVSRQMITQNYGRIVNTASMAGVKGPP---------------------------------N-----MAAYGTSKGAIIA 164 (260)
T ss_dssp HHHHHHHHHHTCEEEEEECCHHHHSCCT---------------------------------T-----BHHHHHHHHHHHH
T ss_pred hhHHhhhhhhcCCCCCeeechhhccCCc---------------------------------c-----hHHHHHHHHHHHH
Confidence 87532 2 2456899999986542210 0 1579999999998
Q ss_pred HHHHc-----CCCCcEEEecCCeEEe
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+.+.. ..|+.+..+.||.|-.
T Consensus 165 ltk~lA~el~~~gIrVN~I~PG~v~T 190 (260)
T d1zema1 165 LTETAALDLAPYNIRVNAISPGYMGP 190 (260)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred HHHHHHHHhhhhCCEEEEeccCcccC
Confidence 88765 3589999999988764
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.47 E-value=7.2e-07 Score=90.16 Aligned_cols=165 Identities=19% Similarity=0.221 Sum_probs=108.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ -+.|.. ++.+|++..|... ...+..+++..
T Consensus 6 L~GK~alITGas~GIG~ai----a~~la~---------------~Ga~V~~~~r~~~--~l~~~~~~~~~---------- 54 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGI----VEELAS---------------LGASVYTCSRNQK--ELNDCLTQWRS---------- 54 (259)
T ss_dssp CTTCEEEEESCSSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHH---------------CCCEEEEEECCHH--HHHHHHHHHHh----------
Confidence 4589999999644333322 334432 2567888877532 22233333211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc--------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD--------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~--------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Ll 316 (782)
.-.++.++.+|++++ ++.+++++ .+|++||+|+..... +.++..+++|+.|+..+.
T Consensus 55 ---~g~~~~~~~~Dv~~~------~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~ 125 (259)
T d2ae2a_ 55 ---KGFKVEASVCDLSSR------SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLS 125 (259)
T ss_dssp ---TTCEEEEEECCTTCH------HHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---cCCCceEEEeeCCCH------HHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEE
Confidence 123678899999987 66655432 379999999974321 446678999999999888
Q ss_pred HHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHH
Q psy16243 317 EMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAED 393 (782)
Q Consensus 317 e~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ 393 (782)
+.+... .+--++|++||....... +....|+.||...+.
T Consensus 126 ~~~~~~m~~~~~G~Ii~isS~~~~~~~--------------------------------------~~~~~Y~asKaal~~ 167 (259)
T d2ae2a_ 126 VLAHPFLKASERGNVVFISSVSGALAV--------------------------------------PYEAVYGATKGAMDQ 167 (259)
T ss_dssp HHHHHHHHHTSSEEEEEECCGGGTSCC--------------------------------------TTCHHHHHHHHHHHH
T ss_pred eeccchhhhhccccccccccccccccc--------------------------------------ccccchHHHHHHHHH
Confidence 875432 244689999998653211 011679999999988
Q ss_pred HHHHc-----CCCCcEEEecCCeEEe
Q psy16243 394 MVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 394 ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+.+.. ..|+.+..+.||.|-.
T Consensus 168 lt~~lA~el~~~gIrVN~I~PG~i~T 193 (259)
T d2ae2a_ 168 LTRCLAFEWAKDNIRVNGVGPGVIAT 193 (259)
T ss_dssp HHHHHHHHTGGGTEEEEEEEECSBCS
T ss_pred HHHHHHHHhCcCceEEEEeeeCcccC
Confidence 88765 3588999999987754
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.46 E-value=4.4e-07 Score=91.23 Aligned_cols=161 Identities=21% Similarity=0.246 Sum_probs=107.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|. +.-+.|... +.+|++..|... .++++.+
T Consensus 4 l~GK~alITGas~GIG~----aia~~la~~---------------Ga~V~i~~r~~~------~~~~~~~---------- 48 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGA----GIVRAFVNS---------------GARVVICDKDES------GGRALEQ---------- 48 (250)
T ss_dssp TTTCEEEEETCSSHHHH----HHHHHHHHT---------------TCEEEEEESCHH------HHHHHHH----------
T ss_pred CCCCEEEEeCCCCHHHH----HHHHHHHHC---------------CCEEEEEECCHH------HHHHHHH----------
Confidence 46899999996443332 223444332 567888777532 2222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccC----ch----hhHHHHHHhhHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVR----FD----AHLKVAVSINLRATKALL 316 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~----f~----~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++.+++++ .+|++||+|+... +. +.++..+++|+.|+..+.
T Consensus 49 ---~~~~~~~~~~Dvs~~------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~ 119 (250)
T d1ydea1 49 ---ELPGAVFILCDVTQE------DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 119 (250)
T ss_dssp ---HCTTEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---hcCCCeEEEccCCCH------HHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHH
Confidence 123577899999997 77776655 4799999998532 21 335678999999999988
Q ss_pred HHHHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHH
Q psy16243 317 EMAKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 394 (782)
Q Consensus 317 e~a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~l 394 (782)
+++... ++--++|++||.+..... +....|+.||...+.+
T Consensus 120 ~~~~p~m~~~~G~Ii~isS~~~~~~~--------------------------------------~~~~~Y~asKaal~~l 161 (250)
T d1ydea1 120 KLALPYLRKSQGNVINISSLVGAIGQ--------------------------------------AQAVPYVATKGAVTAM 161 (250)
T ss_dssp HHHHHHHHHHTCEEEEECCHHHHHCC--------------------------------------TTCHHHHHHHHHHHHH
T ss_pred HHhhHHHHhCCCCCcccccccccccc--------------------------------------cCcchhHHHHhhHHHH
Confidence 875422 112589999998654221 0115899999999988
Q ss_pred HHHc-----CCCCcEEEecCCeEEe
Q psy16243 395 VRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 395 l~~~-----~~glp~~IvRp~~v~G 414 (782)
.+.. ..|+.+..+.||.|-.
T Consensus 162 t~~lA~e~a~~gIrVN~I~PG~i~T 186 (250)
T d1ydea1 162 TKALALDESPYGVRVNCISPGNIWT 186 (250)
T ss_dssp HHHHHHHHGGGTCEEEEEEECSBCC
T ss_pred HHHHHHHhcccCeEEEEEeeCCCCC
Confidence 7765 4589999999988754
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.45 E-value=1.1e-06 Score=88.76 Aligned_cols=168 Identities=18% Similarity=0.189 Sum_probs=107.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|. +.-+.|.. ++.+|++..|... ..++..+++...
T Consensus 8 lk~Kv~lITGas~GIG~----aiA~~la~---------------~G~~Vv~~~r~~~--~l~~~~~~l~~~--------- 57 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGA----AVARALVQ---------------QGLKVVGCARTVG--NIEELAAECKSA--------- 57 (257)
T ss_dssp GTTCEEEEESTTSHHHH----HHHHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHHHT---------
T ss_pred CCCCEEEEeCCCCHHHH----HHHHHHHH---------------CCCEEEEEECCHH--HHHHHHHHHHhc---------
Confidence 66999999996443333 22344432 2667887777532 222222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
....++.++.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+..+.+
T Consensus 58 --~~~~~~~~~~~Dls~~------~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~ 129 (257)
T d1xg5a_ 58 --GYPGTLIPYRCDLSNE------EDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTR 129 (257)
T ss_dssp --TCSSEEEEEECCTTCH------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred --CCCceEEEEEccCCCH------HHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHH
Confidence 1124788999999997 77766554 46999999987532 25566789999999888777
Q ss_pred HHH----Hcc-CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 318 MAK----EMK-QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 318 ~a~----~~~-~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+. +.+ +-.++|++||.+.....+ . .-...|+.+|...+
T Consensus 130 ~~~~~~~~~~~~~g~Ii~isS~~~~~~~p---------------------------------~---~~~~~Y~~sKaal~ 173 (257)
T d1xg5a_ 130 EAYQSMKERNVDDGHIININSMSGHRVLP---------------------------------L---SVTHFYSATKYAVT 173 (257)
T ss_dssp HHHHHHHHTTCCSCEEEEECCGGGTSCCS---------------------------------C---GGGHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCceEEEechHhcCCCC---------------------------------C---cccHHHHHHHHHHH
Confidence 653 221 236899999987542210 0 00145999999999
Q ss_pred HHHHHc-------CCCCcEEEecCCeEE
Q psy16243 393 DMVRRG-------GAGMPVAMVRPSIVI 413 (782)
Q Consensus 393 ~ll~~~-------~~glp~~IvRp~~v~ 413 (782)
.+.+.. ..++.+..+-||.+-
T Consensus 174 ~ltr~la~el~~~~~~I~vn~i~PG~i~ 201 (257)
T d1xg5a_ 174 ALTEGLRQELREAQTHIRATCISPGVVE 201 (257)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEEESCBC
T ss_pred hCHHHHHHHHHhCCCCEEEEEEeCCCCC
Confidence 887543 357888888887664
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.44 E-value=2.1e-06 Score=86.71 Aligned_cols=172 Identities=17% Similarity=0.177 Sum_probs=108.2
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|..+ -+.|... +.+|++..|.... ..+..+++.+
T Consensus 7 l~gK~alITGas~GIG~ai----a~~la~~---------------Ga~V~i~~r~~~~--~~~~~~~~~~---------- 55 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAF----TRAVAAA---------------GANVAVIYRSAAD--AVEVTEKVGK---------- 55 (260)
T ss_dssp CTTEEEEEETTTSHHHHHH----HHHHHHT---------------TEEEEEEESSCTT--HHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHHC---------------CCEEEEEECCHHH--HHHHHHHHHH----------
Confidence 5689999999644333322 3444322 6788888886432 2223332211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..-.++..+.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+..+.+
T Consensus 56 --~~g~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 127 (260)
T d1h5qa_ 56 --EFGVKTKAYQCDVSNT------DIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCR 127 (260)
T ss_dssp --HHTCCEEEEECCTTCH------HHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred --HhCCceEEEEccCCCH------HHHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhh
Confidence 1124788999999998 77766664 57999999986422 14566789999999988877
Q ss_pred HHHH----ccCCceEEEEecceeccCCC-cccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 318 MAKE----MKQLKSFVHVSTAYSNCRQP-IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 318 ~a~~----~~~~~~fV~vST~~v~~~~~-~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+.. .+.-..++.+||........ .+.- ......|+.||...+
T Consensus 128 ~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~--------------------------------~~~~~~Y~asKaal~ 175 (260)
T d1h5qa_ 128 AVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNG--------------------------------SLTQVFYNSSKAACS 175 (260)
T ss_dssp HHHHHHHHHTCCEEEEEECCGGGTSCCEEETTE--------------------------------ECSCHHHHHHHHHHH
T ss_pred hhcccccccccceEEEEeecccccccccccccc--------------------------------CccccchhhhhhhHH
Confidence 6432 23445566666654432211 0000 011157999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
.+.+.. ..|+.+..+.||.|-.
T Consensus 176 ~lt~~lA~el~~~gIrvN~I~PG~i~T 202 (260)
T d1h5qa_ 176 NLVKGLAAEWASAGIRVNALSPGYVNT 202 (260)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred HHHHHHHHHhchhCeEEeecCCCcccC
Confidence 887765 4589999999887754
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.43 E-value=5.6e-07 Score=90.74 Aligned_cols=165 Identities=14% Similarity=0.105 Sum_probs=108.5
Q ss_pred CCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccC
Q psy16243 173 LSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRC 252 (782)
Q Consensus 173 ~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~ 252 (782)
.+|+++|||..+..|.. .-+.|.+ ++.+|++..|... ...+...++.+.
T Consensus 2 ~GKvalITGas~GIG~a----ia~~la~---------------~Ga~V~i~~r~~~--~~~~~~~~l~~~---------- 50 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRA----FAEALLL---------------KGAKVALVDWNLE--AGVQCKAALHEQ---------- 50 (254)
T ss_dssp TTCEEEEETTTSHHHHH----HHHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHTTT----------
T ss_pred CCCEEEEeCCCCHHHHH----HHHHHHH---------------CCCEEEEEECCHH--HHHHHHHHHHHh----------
Confidence 37999999964333322 2333332 2678888887532 222222222110
Q ss_pred cccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHc-c-
Q psy16243 253 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEM-K- 323 (782)
Q Consensus 253 ~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~-~- 323 (782)
....++.++.+|++++ ++++++++ .+|++||+|+... ..++++.+++|+.|+..+..++... .
T Consensus 51 -~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~ 122 (254)
T d2gdza1 51 -FEPQKTLFIQCDVADQ------QQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSK 122 (254)
T ss_dssp -SCGGGEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCG
T ss_pred -cCCCcEEEEEeecCCH------HHHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHHHHH
Confidence 0124788999999997 77776654 5799999999864 4678889999999988887775432 1
Q ss_pred ----CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHH--
Q psy16243 324 ----QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR-- 397 (782)
Q Consensus 324 ----~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~-- 397 (782)
.-.++|++||.+..... +....|+.||+..+.+.+.
T Consensus 123 ~~~~~~g~Iv~isS~~~~~~~--------------------------------------~~~~~Y~asKaal~~ltrs~a 164 (254)
T d2gdza1 123 QNGGEGGIIINMSSLAGLMPV--------------------------------------AQQPVYCASKHGIVGFTRSAA 164 (254)
T ss_dssp GGTCCCEEEEEECCGGGTSCC--------------------------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCCcEEEeeccHhhccCC--------------------------------------CCccchHHHHHHHHHHHHHHH
Confidence 12469999998653211 0115799999999888652
Q ss_pred ----c-CCCCcEEEecCCeEEe
Q psy16243 398 ----G-GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 398 ----~-~~glp~~IvRp~~v~G 414 (782)
+ ..|+.+..+.||.|-.
T Consensus 165 la~e~~~~gIrVN~I~PG~i~T 186 (254)
T d2gdza1 165 LAANLMNSGVRLNAICPGFVNT 186 (254)
T ss_dssp HHHHHHTCCEEEEEEEESCBSS
T ss_pred HHHHhcCCCEEEEEEEcCCCCC
Confidence 2 5689999999987753
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.42 E-value=8.8e-07 Score=90.19 Aligned_cols=170 Identities=19% Similarity=0.222 Sum_probs=107.1
Q ss_pred cccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccc
Q psy16243 170 PHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMR 249 (782)
Q Consensus 170 p~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~ 249 (782)
|.+.+|+++|||..+.+|.. .-+.|... +.+|++..|... ..++..+++.+.
T Consensus 1 prL~gK~alVTGas~GIG~a----ia~~la~~---------------Ga~V~l~~r~~~--~l~~~~~~l~~~------- 52 (272)
T d1xkqa_ 1 PRFSNKTVIITGSSNGIGRT----TAILFAQE---------------GANVTITGRSSE--RLEETRQIILKS------- 52 (272)
T ss_dssp CTTTTCEEEETTCSSHHHHH----HHHHHHHT---------------TCEEEEEESCHH--HHHHHHHHHHTT-------
T ss_pred CCCCCCEEEEeCcCcHHHHH----HHHHHHHC---------------CCEEEEEECCHH--HHHHHHHHHHhc-------
Confidence 44679999999964433322 23444322 678888888532 222222222211
Q ss_pred ccCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc--------hh---hHHHHHHhhHHH
Q psy16243 250 KRCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF--------DA---HLKVAVSINLRA 311 (782)
Q Consensus 250 ~~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f--------~~---~~~~~~~~Nv~g 311 (782)
.....++..+.+|++++ ++.+++++ .+|++||+|+.... +. .++..+++|+.|
T Consensus 53 ---~~~~~~~~~~~~Dvs~~------~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~ 123 (272)
T d1xkqa_ 53 ---GVSEKQVNSVVADVTTE------DGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 123 (272)
T ss_dssp ---TCCGGGEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHH
T ss_pred ---CCCCCceEEEEccCCCH------HHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhH
Confidence 11234789999999998 77766654 47999999987421 11 356788999999
Q ss_pred HHHHHHHHHHc--cCCceEEEEecc-eeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHH
Q psy16243 312 TKALLEMAKEM--KQLKSFVHVSTA-YSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTK 388 (782)
Q Consensus 312 t~~Lle~a~~~--~~~~~fV~vST~-~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK 388 (782)
+..+.+++... ++-..+|.++|. +..... | ....|+.||
T Consensus 124 ~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~---------------------------------~-----~~~~Y~asK 165 (272)
T d1xkqa_ 124 VIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ---------------------------------P-----DFLYYAIAK 165 (272)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEECCGGGSSSCC---------------------------------C-----SSHHHHHHH
T ss_pred HHHHHHhhcccccccCCccccccchhccccCC---------------------------------C-----CcchhhhHH
Confidence 99988875432 122355555553 322110 0 115799999
Q ss_pred HHHHHHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 389 QVAEDMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 389 ~~aE~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
..-+.+.+.. ..|+.+..+.||.|-.
T Consensus 166 aal~~ltk~lA~el~~~gIrVN~I~PG~i~T 196 (272)
T d1xkqa_ 166 AALDQYTRSTAIDLAKFGIRVNSVSPGMVET 196 (272)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECCBCS
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCCCcc
Confidence 9998887765 4689999999987754
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.40 E-value=8.6e-07 Score=88.72 Aligned_cols=114 Identities=17% Similarity=0.253 Sum_probs=84.5
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|++++ ++.+++++ .+|++||+|+.... .+.++..+++|+.|+..+.+.+...
T Consensus 51 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 124 (244)
T d1edoa_ 51 GQAITFGGDVSKE------ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKI 124 (244)
T ss_dssp CEEEEEECCTTSH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 3788999999998 77766654 47999999987532 1456678999999999888875331
Q ss_pred ---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-
Q psy16243 323 ---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG- 398 (782)
Q Consensus 323 ---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~- 398 (782)
.+--++|++||.+..... | ....|+.||...+.+.+..
T Consensus 125 m~~~~~G~IVnisS~~~~~~~---------------------------------~-----~~~~Y~asKaal~~ltk~lA 166 (244)
T d1edoa_ 125 MMKKRKGRIINIASVVGLIGN---------------------------------I-----GQANYAAAKAGVIGFSKTAA 166 (244)
T ss_dssp HHHHTCEEEEEECCTHHHHCC---------------------------------T-----TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEEcChhhcCCC---------------------------------C-----CCHHHHHHHHHHHHChHHHH
Confidence 245689999998654211 0 1167999999999888765
Q ss_pred ----CCCCcEEEecCCeEEe
Q psy16243 399 ----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 ----~~glp~~IvRp~~v~G 414 (782)
..|+.+..+.||.+-.
T Consensus 167 ~el~~~gIrvN~I~PG~i~T 186 (244)
T d1edoa_ 167 REGASRNINVNVVCPGFIAS 186 (244)
T ss_dssp HHHHTTTEEEEEEEECSBCS
T ss_pred HHHhhhCcEEEEEecceecc
Confidence 4589999998887653
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.38 E-value=5.6e-07 Score=90.33 Aligned_cols=167 Identities=13% Similarity=0.120 Sum_probs=103.2
Q ss_pred CCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccccCc
Q psy16243 174 SKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKRCP 253 (782)
Q Consensus 174 ~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~~~ 253 (782)
.|+|+|||....+|..+ -+.|+. ++ .++.+|++..|...... .++++.+
T Consensus 2 MKtilITGas~GIG~a~----a~~l~~-------~a-----~~g~~V~~~~r~~~~~~---~~~~~~~------------ 50 (248)
T d1snya_ 2 MNSILITGCNRGLGLGL----VKALLN-------LP-----QPPQHLFTTCRNREQAK---ELEDLAK------------ 50 (248)
T ss_dssp CSEEEESCCSSHHHHHH----HHHHHT-------SS-----SCCSEEEEEESCTTSCH---HHHHHHH------------
T ss_pred cCEEEEeCCCCHHHHHH----HHHHHH-------HH-----hCCCEEEEEECCHHHHH---HHHHHHh------------
Confidence 47899999754433332 334421 11 12678888888754321 2222211
Q ss_pred ccccceeEEecCCCCCCCCCCHHhHHHHhc---------CceEEEEcCcccCch--------hhHHHHHHhhHHHHHHHH
Q psy16243 254 HYLSKMVAVTGDCLKPGVGINSEDRQTLVD---------NIHVVFHCAATVRFD--------AHLKVAVSINLRATKALL 316 (782)
Q Consensus 254 ~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~---------~vdiViH~Aa~v~f~--------~~~~~~~~~Nv~gt~~Ll 316 (782)
...++.++.+|++++ ++.+++++ .+|++||+|+..... +.++..+++|+.|+..+.
T Consensus 51 -~~~~~~~~~~Dvs~~------~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~ 123 (248)
T d1snya_ 51 -NHSNIHILEIDLRNF------DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLA 123 (248)
T ss_dssp -HCTTEEEEECCTTCG------GGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred -cCCcEEEEEEEeccH------HHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHH
Confidence 124789999999998 55554432 479999999864221 235568899999998888
Q ss_pred HHHHH----c----------cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCc
Q psy16243 317 EMAKE----M----------KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPN 382 (782)
Q Consensus 317 e~a~~----~----------~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn 382 (782)
+.+.. . .+-.++|.+||....-... + .+ ...
T Consensus 124 ~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~--------~----------------------~~-----~~~ 168 (248)
T d1snya_ 124 KACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN--------T----------------------DG-----GMY 168 (248)
T ss_dssp HHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC--------C----------------------SC-----CCH
T ss_pred HHHHHHHHHhhhccccccccccccccccccccccccCCC--------C----------------------CC-----ChH
Confidence 77432 1 1245789998864321100 0 00 014
Q ss_pred cHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEE
Q psy16243 383 TYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVI 413 (782)
Q Consensus 383 ~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~ 413 (782)
.|+.||+....+.+.. ..|+.+..+.||.|-
T Consensus 169 ~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~ 204 (248)
T d1snya_ 169 AYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK 204 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCccc
Confidence 7999999888887654 358888888887664
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.37 E-value=2.4e-06 Score=85.25 Aligned_cols=161 Identities=18% Similarity=0.188 Sum_probs=105.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|.. ..+.|..+ +.+|++..|... ...+.++++
T Consensus 3 l~gK~alItGas~GIG~a----ia~~l~~~---------------G~~V~~~~r~~~--~~~~~~~~~------------ 49 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRA----ALDLFARE---------------GASLVAVDREER--LLAEAVAAL------------ 49 (241)
T ss_dssp TTTCEEEEESTTSHHHHH----HHHHHHHT---------------TCEEEEEESCHH--HHHHHHHTC------------
T ss_pred CCCCEEEEeCCCCHHHHH----HHHHHHHC---------------CCEEEEEECCHH--HHHHHHHHc------------
Confidence 468999999964433332 23444332 678888877542 122222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
..++.++.+|++++ ++.+++++ ++|++||+|+..... +.+++.+++|+.++..+.+
T Consensus 50 ----~~~~~~~~~Dls~~------~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k 119 (241)
T d2a4ka1 50 ----EAEAIAVVADVSDP------KAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR 119 (241)
T ss_dssp ----CSSEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCceEEEEecCCCH------HHHHHHHHHHHHHhCCccEeccccccccccchhhhhcccccccccccccccccccc
Confidence 24788899999988 77766554 479999999864221 3455789999999999998
Q ss_pred HHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 318 MAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 318 ~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
++... .+-..++.+||.+.... |. ...|+.+|+.-|.+.+
T Consensus 120 ~~~~~~~~~~~i~~~ss~a~~~~----------------------------------~~-----~~~Y~~sK~al~~lt~ 160 (241)
T d2a4ka1 120 KAGEVLEEGGSLVLTGSVAGLGA----------------------------------FG-----LAHYAAGKLGVVGLAR 160 (241)
T ss_dssp HHHHHCCTTCEEEEECCCTTCCH----------------------------------HH-----HHHHHHCSSHHHHHHH
T ss_pred ccccccccccceeeccccccccc----------------------------------cC-----ccccchhhHHHHHHHH
Confidence 86543 33344444444432111 00 0579999999999887
Q ss_pred Hc-----CCCCcEEEecCCeEEe
Q psy16243 397 RG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G 414 (782)
.. ..|+.+..+.||.+-.
T Consensus 161 ~lA~el~~~gIrvN~I~PG~v~T 183 (241)
T d2a4ka1 161 TLALELARKGVRVNVLLPGLIQT 183 (241)
T ss_dssp HHHHHHTTTTCEEEEEEECSBCC
T ss_pred HHHHHHhHhCCEEeeeccCcCCC
Confidence 65 3589999999988754
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.34 E-value=2.8e-06 Score=85.41 Aligned_cols=163 Identities=18% Similarity=0.140 Sum_probs=106.9
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|.. .-+.|... +.+|++..|... ...+..+++
T Consensus 4 L~gK~alITGas~GIG~a----ia~~la~~---------------Ga~V~~~~~~~~--~~~~~~~~~------------ 50 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLE----VVKLLLGE---------------GAKVAFSDINEA--AGQQLAAEL------------ 50 (253)
T ss_dssp TTTCEEEETTTTSHHHHH----HHHHHHHT---------------TCEEEEECSCHH--HHHHHHHHH------------
T ss_pred CCCCEEEEeCCCCHHHHH----HHHHHHHC---------------CCEEEEEECCHH--HHHHHHHHh------------
Confidence 458999999964333322 23444322 567777777432 222222221
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
..+..++.+|++++ ++.+.+++ .+|++||+|+.... .+.++..+++|+.|+..+.+
T Consensus 51 ----~~~~~~~~~Dv~~~------~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~ 120 (253)
T d1hxha_ 51 ----GERSMFVRHDVSSE------ADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ 120 (253)
T ss_dssp ----CTTEEEECCCTTCH------HHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----CCCeEEEEeecCCH------HHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence 23677899999987 67666654 46999999997532 14566789999999998888
Q ss_pred HHHH-cc-CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 318 MAKE-MK-QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 318 ~a~~-~~-~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
.+.. ++ +--++|++||.+..... | ....|+.||+..+.+.
T Consensus 121 ~~~~~m~~~~G~Iv~isS~~~~~~~---------------------------------~-----~~~~Y~asKaal~~lt 162 (253)
T d1hxha_ 121 QGIAAMKETGGSIINMASVSSWLPI---------------------------------E-----QYAGYSASKAAVSALT 162 (253)
T ss_dssp HHHHHHTTTCEEEEEECCGGGTSCC---------------------------------T-----TBHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCceecccchhhhcCc---------------------------------c-----ccccccchhHHHHHHH
Confidence 7543 21 23689999998653211 0 0157999999998887
Q ss_pred HHc-----C--CCCcEEEecCCeEEec
Q psy16243 396 RRG-----G--AGMPVAMVRPSIVIAT 415 (782)
Q Consensus 396 ~~~-----~--~glp~~IvRp~~v~G~ 415 (782)
+.. . .++.+..+.||.+..+
T Consensus 163 ~~lA~e~~~~g~~IrVN~I~PG~i~T~ 189 (253)
T d1hxha_ 163 RAAALSCRKQGYAIRVNSIHPDGIYTP 189 (253)
T ss_dssp HHHHHHHHHHTCCEEEEEEEESEECCH
T ss_pred HHHHHHHhhcCCCEEEEEEeECCCcCH
Confidence 654 1 2588888999887643
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.32 E-value=2.3e-06 Score=87.10 Aligned_cols=168 Identities=17% Similarity=0.168 Sum_probs=107.4
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.+|. +.-+.|.+. +.+|++..|... ..++..+++.+.
T Consensus 2 L~gK~alITGas~GIG~----aia~~la~~---------------Ga~V~~~~r~~~--~l~~~~~~i~~~--------- 51 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGR----SAAVIFAKE---------------GAQVTITGRNED--RLEETKQQILKA--------- 51 (274)
T ss_dssp CTTCEEEETTCSSHHHH----HHHHHHHHT---------------TCEEEEEESCHH--HHHHHHHHHHHT---------
T ss_pred CCCCEEEEeCCCcHHHH----HHHHHHHHC---------------CCEEEEEECCHH--HHHHHHHHHHHc---------
Confidence 35899999996443332 223444322 677888877532 122222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-----h----hhHHHHHHhhHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-----D----AHLKVAVSINLRATKAL 315 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-----~----~~~~~~~~~Nv~gt~~L 315 (782)
.....++..+.+|++++ ++.+++++ .+|+++|+|+.... . +.++..+++|+.|+..+
T Consensus 52 -~~~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~ 124 (274)
T d1xhla_ 52 -GVPAEKINAVVADVTEA------SGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM 124 (274)
T ss_dssp -TCCGGGEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHH
T ss_pred -CCCCcceEEEEeeCCCH------HHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccc
Confidence 11235789999999998 77766654 46999999985311 1 33567889999999988
Q ss_pred HHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 316 LEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 316 le~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+.+... .+-..++++||....... + ....|+.||..-+
T Consensus 125 ~~~~~~~m~~~~~g~ii~~ss~~~~~~~---------------------------------~-----~~~~Y~asKaal~ 166 (274)
T d1xhla_ 125 TQKTKEHLIKTKGEIVNVSSIVAGPQAH---------------------------------S-----GYPYYACAKAALD 166 (274)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGSSSCC---------------------------------T-----TSHHHHHHHHHHH
T ss_pred cccccccccccccccccchhhhhccccC---------------------------------C-----CCceehhhhhHHH
Confidence 8875432 234567777765432110 0 0157999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
.+.+.. ..|+.+..+.||.|-.
T Consensus 167 ~ltk~lA~ela~~gIrVN~I~PG~i~T 193 (274)
T d1xhla_ 167 QYTRCTAIDLIQHGVRVNSVSPGAVAT 193 (274)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCBCS
T ss_pred HHHHHHHHHHhHhCCceeeeccCCCcC
Confidence 888665 4589999999988754
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.32 E-value=5.6e-06 Score=82.03 Aligned_cols=157 Identities=14% Similarity=0.041 Sum_probs=101.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|. +.-+.|.+. +.+|++..|.. +.+++.
T Consensus 2 LkgK~~lVTGas~GIG~----aia~~l~~~---------------Ga~V~~~~r~~------~~l~~~------------ 44 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGR----AVADVLSQE---------------GAEVTICARNE------ELLKRS------------ 44 (234)
T ss_dssp CTTCEEEEESCSSHHHH----HHHHHHHHT---------------TCEEEEEESCH------HHHHHT------------
T ss_pred CCCCEEEEeCCCcHHHH----HHHHHHHHC---------------CCEEEEEECCH------HHHHhc------------
Confidence 46899999996433332 223444332 56777777752 233321
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc--
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM-- 322 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~-- 322 (782)
...++.+|+++. .+...+-+.++|++||+|+.... .+.++..+++|+.|+..+.+.+...
T Consensus 45 ------~~~~~~~Dv~~~-----~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~ 113 (234)
T d1o5ia_ 45 ------GHRYVVCDLRKD-----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMK 113 (234)
T ss_dssp ------CSEEEECCTTTC-----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ------CCcEEEcchHHH-----HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccc
Confidence 224567888764 24455555678999999986432 1445678899999988887765321
Q ss_pred -cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc---
Q psy16243 323 -KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG--- 398 (782)
Q Consensus 323 -~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~--- 398 (782)
++-.++|.+||........ ....|+.||...+.+.+..
T Consensus 114 ~~~~G~ii~i~S~~~~~~~~--------------------------------------~~~~Y~asKaal~~ltk~lA~e 155 (234)
T d1o5ia_ 114 EKGWGRIVAITSFSVISPIE--------------------------------------NLYTSNSARMALTGFLKTLSFE 155 (234)
T ss_dssp HHTCEEEEEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccc--------------------------------------ccccchhHHHHHHHHHHHHHHH
Confidence 2446899999875432210 1157999999988877665
Q ss_pred --CCCCcEEEecCCeEEe
Q psy16243 399 --GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 399 --~~glp~~IvRp~~v~G 414 (782)
..|+.+..+.||.+-.
T Consensus 156 la~~gIrVN~I~PG~v~T 173 (234)
T d1o5ia_ 156 VAPYGITVNCVAPGWTET 173 (234)
T ss_dssp HGGGTEEEEEEEECSBCC
T ss_pred hcccCeEEeecccCccch
Confidence 3588988899887654
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.31 E-value=2.5e-06 Score=86.64 Aligned_cols=168 Identities=17% Similarity=0.159 Sum_probs=109.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+.+|.++ -+.|... +.+|++..|... +..++..+++.+
T Consensus 16 L~gK~~lITGas~GIG~ai----a~~la~~---------------Ga~Vvi~~~~~~-~~~~~~~~~~~~---------- 65 (272)
T d1g0oa_ 16 LEGKVALVTGAGRGIGREM----AMELGRR---------------GCKVIVNYANST-ESAEEVVAAIKK---------- 65 (272)
T ss_dssp CTTCEEEETTTTSHHHHHH----HHHHHHT---------------TCEEEEEESSCH-HHHHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHHc---------------CCEEEEEeCCch-HHHHHHHHHHHh----------
Confidence 6689999999754444333 3333322 567776665432 112222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle 317 (782)
.-.++.++.+|++++ +++..+++ .+|+++|+|+..... +.++..+++|+.|+..+.+
T Consensus 66 ---~g~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~ 136 (272)
T d1g0oa_ 66 ---NGSDAACVKANVGVV------EDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAR 136 (272)
T ss_dssp ---TTCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---hCCceeeEeCCCCCH------HHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecc
Confidence 123688999999987 67666654 469999999875322 4456788999999999998
Q ss_pred HHHH-ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 318 MAKE-MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 318 ~a~~-~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
++.. +..-.+.++++|.+...... .....|+.||+.-+.+.+
T Consensus 137 ~~~~~m~~~g~~i~i~s~~~~~~~~-------------------------------------~~~~~Y~asKaal~~ltk 179 (272)
T d1g0oa_ 137 EAYKHLEIGGRLILMGSITGQAKAV-------------------------------------PKHAVYSGSKGAIETFAR 179 (272)
T ss_dssp HHHHHSCTTCEEEEECCGGGTCSSC-------------------------------------SSCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccc-------------------------------------cchhhHHHHHHHHHHHHH
Confidence 8654 33445778887764322110 112579999999988887
Q ss_pred Hc-----CCCCcEEEecCCeEEec
Q psy16243 397 RG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G~ 415 (782)
.. ..|+++..+.||.+-.+
T Consensus 180 ~lA~e~~~~gIrVN~I~PG~v~T~ 203 (272)
T d1g0oa_ 180 CMAIDMADKKITVNVVAPGGIKTD 203 (272)
T ss_dssp HHHHHHGGGTCEEEEEEECCBSSH
T ss_pred HHHHHhchhCeEEEEEccCCcCCh
Confidence 65 45899999999888643
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.30 E-value=1.5e-06 Score=87.80 Aligned_cols=171 Identities=16% Similarity=0.119 Sum_probs=109.5
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
++.+|+++|||....+|.++ -+.|... ..++.+|++..|... ..++..+++..
T Consensus 3 ~L~gKvalITGas~GIG~ai----A~~lA~~------------~~~G~~Vv~~~r~~~--~l~~~~~~l~~--------- 55 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRAL----APQLARL------------LSPGSVMLVSARSES--MLRQLKEELGA--------- 55 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHH----HHHHHTT------------BCTTCEEEEEESCHH--HHHHHHHHHHH---------
T ss_pred CCCCCEEEEeCCCCHHHHHH----HHHHHhc------------ccCCCEEEEEECCHH--HHHHHHHHHHh---------
Confidence 45689999999644333332 2333210 123567888888532 12222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-----------CceEEEEcCcccC------ch----hhHHHHHHhhH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-----------NIHVVFHCAATVR------FD----AHLKVAVSINL 309 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-----------~vdiViH~Aa~v~------f~----~~~~~~~~~Nv 309 (782)
..+ ..++.++.+|++++ ++.+++++ .+|+++|+|+... +. +.++..+++|+
T Consensus 56 ~~~--~~~~~~~~~Dvs~~------~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~ 127 (259)
T d1oaaa_ 56 QQP--DLKVVLAAADLGTE------AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNL 127 (259)
T ss_dssp HCT--TSEEEEEECCTTSH------HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHT
T ss_pred hcC--CceEEEEEccCCCH------HHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhh
Confidence 011 23789999999998 77776653 3578999998632 11 34667899999
Q ss_pred HHHHHHHHHHHHc-cC----CceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccH
Q psy16243 310 RATKALLEMAKEM-KQ----LKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTY 384 (782)
Q Consensus 310 ~gt~~Lle~a~~~-~~----~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y 384 (782)
.|+..+.+.+... .. -.++|++||.+..... | ....|
T Consensus 128 ~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~---------------------------------~-----~~~~Y 169 (259)
T d1oaaa_ 128 TSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY---------------------------------K-----GWGLY 169 (259)
T ss_dssp HHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC---------------------------------T-----TCHHH
T ss_pred hhhHHHHHHHHHHHHhcCCCcccccccccccccCCC---------------------------------c-----cchHH
Confidence 9999999987543 11 2478999997653221 0 11689
Q ss_pred HHHHHHHHHHHHHc---CCCCcEEEecCCeEEe
Q psy16243 385 ALTKQVAEDMVRRG---GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 385 ~~SK~~aE~ll~~~---~~glp~~IvRp~~v~G 414 (782)
+.||+..+.+.+.. ..|+.+..+.||.|-.
T Consensus 170 ~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T 202 (259)
T d1oaaa_ 170 CAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDN 202 (259)
T ss_dssp HHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSS
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCC
Confidence 99999999888766 5688888888887754
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.27 E-value=2.7e-06 Score=86.65 Aligned_cols=163 Identities=16% Similarity=0.141 Sum_probs=105.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ -+.|... +.+|++..|.. ++++++.+
T Consensus 3 L~gK~alITGas~GIG~ai----a~~la~~---------------Ga~V~i~~r~~------~~l~~~~~---------- 47 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRAL----VDRFVAE---------------GAKVAVLDKSA------ERLAELET---------- 47 (276)
T ss_dssp TTTCEEEEETTTSHHHHHH----HHHHHHT---------------TCEEEEEESCH------HHHHHHHH----------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHHC---------------CCEEEEEECCH------HHHHHHHH----------
Confidence 3589999999644433332 3444322 67788887753 22322211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch------------hhHHHHHHhhHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD------------AHLKVAVSINLRAT 312 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~------------~~~~~~~~~Nv~gt 312 (782)
+...++..+.+|++++ ++.+++++ .+|+++|+|+...+. +.++..+++|+.|+
T Consensus 48 --~~~~~~~~~~~Dv~~~------~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~ 119 (276)
T d1bdba_ 48 --DHGDNVLGIVGDVRSL------EDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGY 119 (276)
T ss_dssp --HHGGGEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHH
T ss_pred --HcCCCeeEEecccccH------HHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHH
Confidence 1124788999999987 66666654 579999999864321 13567899999999
Q ss_pred HHHHHHHHHc--cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHH
Q psy16243 313 KALLEMAKEM--KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 390 (782)
Q Consensus 313 ~~Lle~a~~~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~ 390 (782)
..+.+.+... ++--++|++||....... | ....|+.||+.
T Consensus 120 ~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~---------------------------------~-----~~~~Y~asKaa 161 (276)
T d1bdba_ 120 IHAVKACLPALVASRGNVIFTISNAGFYPN---------------------------------G-----GGPLYTAAKHA 161 (276)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCGGGTSTT---------------------------------S-----SCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceeeeechhccCC---------------------------------C-----CCchHHHHHHH
Confidence 8888775321 112578888876532110 0 01579999999
Q ss_pred HHHHHHHc----CCCCcEEEecCCeEEec
Q psy16243 391 AEDMVRRG----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 391 aE~ll~~~----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.+.. .+++.+..+.||.|-.+
T Consensus 162 l~~ltr~lA~ela~~IrVN~I~PG~i~T~ 190 (276)
T d1bdba_ 162 IVGLVRELAFELAPYVRVNGVGSGGINSD 190 (276)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEECCCCSC
T ss_pred HHHHHHHHHHHhhcceEEcccCCCCEecC
Confidence 98887765 45688888888877543
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.26 E-value=3.5e-06 Score=86.89 Aligned_cols=91 Identities=13% Similarity=0.117 Sum_probs=65.7
Q ss_pred CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCC
Q psy16243 284 NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVN 353 (782)
Q Consensus 284 ~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~ 353 (782)
.+|++||+||..... +.++..+++|+.|+..+.+.+... .+-.++|++||.+.....
T Consensus 90 ~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~------------- 156 (302)
T d1gz6a_ 90 RIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN------------- 156 (302)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-------------
T ss_pred CCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC-------------
Confidence 589999999975321 456678999999999998875321 244699999998643211
Q ss_pred hhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeE
Q psy16243 354 PNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIV 412 (782)
Q Consensus 354 ~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v 412 (782)
+ ....|+.||..-+.+.+.. ..|+.+..+.||.+
T Consensus 157 --------------------~-----~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~ 195 (302)
T d1gz6a_ 157 --------------------F-----GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 195 (302)
T ss_dssp --------------------T-----TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred --------------------C-----CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCC
Confidence 0 0167999999999887765 34788888888654
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.23 E-value=2.1e-06 Score=86.64 Aligned_cols=167 Identities=19% Similarity=0.175 Sum_probs=105.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ -+.|.+. +.+|++..|.... ..+.+.+..+
T Consensus 4 L~GK~alITGas~GIG~ai----a~~la~~---------------G~~Vvi~~~~~~~--~~~~~~~~~~---------- 52 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGI----AIELGRR---------------GASVVVNYGSSSK--AAEEVVAELK---------- 52 (259)
T ss_dssp TTTCEEEETTTTSHHHHHH----HHHHHHT---------------TCEEEEEESSCHH--HHHHHHHHHH----------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHHc---------------CCEEEEEcCCChH--HHHHHHHHHH----------
Confidence 4589999999654444333 3444322 5677766554321 2223222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
+.-.++..+.+|++++ ++.+.+++ .+|++||+|+.... .+.++..+++|+.|...+++
T Consensus 53 --~~g~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 124 (259)
T d1ja9a_ 53 --KLGAQGVAIQADISKP------SEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQ 124 (259)
T ss_dssp --HTTCCEEEEECCTTSH------HHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred --HcCCCceEecCCCCCH------HHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehh
Confidence 1123788999999987 66666554 57999999997532 14456789999999999988
Q ss_pred HHHH-ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHH
Q psy16243 318 MAKE-MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVR 396 (782)
Q Consensus 318 ~a~~-~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~ 396 (782)
.+.. +++-.+.+.++|.+..-. + .| ....|+.||..-+.+.+
T Consensus 125 ~~~~~m~~~g~~iii~s~~~~~~-~-------------------------------~~-----~~~~Y~asK~al~~l~r 167 (259)
T d1ja9a_ 125 QGLKHCRRGGRIILTSSIAAVMT-G-------------------------------IP-----NHALYAGSKAAVEGFCR 167 (259)
T ss_dssp HHHHHEEEEEEEEEECCGGGTCC-S-------------------------------CC-----SCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhcCCccccccccccccc-C-------------------------------CC-----CchhHHHHHHHHHHHHH
Confidence 8654 333345666665432110 0 00 11579999998888877
Q ss_pred Hc-----CCCCcEEEecCCeEEe
Q psy16243 397 RG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 397 ~~-----~~glp~~IvRp~~v~G 414 (782)
.. ..|+.+..+.||.+-.
T Consensus 168 ~lA~e~~~~gIrvN~I~PG~i~T 190 (259)
T d1ja9a_ 168 AFAVDCGAKGVTVNCIAPGGVKT 190 (259)
T ss_dssp HHHHHHGGGTCEEEEEEECCBSS
T ss_pred HHHHHHhhcCeEEeccCcCCccC
Confidence 65 3489999999988753
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.21 E-value=1.1e-05 Score=82.75 Aligned_cols=168 Identities=18% Similarity=0.198 Sum_probs=104.8
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+.+|.++ -+.|.. .+.+|++..|... ...+..+++..
T Consensus 22 ~l~gK~alITGas~GIG~ai----A~~la~---------------~Ga~Vii~~r~~~--~l~~~~~~l~~--------- 71 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGM----TTLLSS---------------LGAQCVIASRKMD--VLKATAEQISS--------- 71 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESCHH--HHHHHHHHHHH---------
T ss_pred CCCCCEEEEeCCCCHHHHHH----HHHHHH---------------cCCEEEEEECCHH--HHHHHHHHHHH---------
Confidence 47799999999654444333 233322 2678888888643 22222222221
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHH
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD-------AHLKVAVSINLRATKALL 316 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Ll 316 (782)
..-.++..+.+|++++ ++.+.+++ .+|+++|+|+..... ......+.+|..+...+.
T Consensus 72 ---~~g~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 142 (294)
T d1w6ua_ 72 ---QTGNKVHAIQCDVRDP------DMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 142 (294)
T ss_dssp ---HHSSCEEEEECCTTCH------HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---hcCCceEEEEecccCh------HHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhh
Confidence 1124678899999987 66554443 579999999974332 234456778888777665
Q ss_pred HHH----HHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 317 EMA----KEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 317 e~a----~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
..+ .....-..++.+||.+..... +....|+.+|..-+
T Consensus 143 ~~~~~~~~~~~~~~~i~~~ss~~~~~~~--------------------------------------~~~~~YsasKaal~ 184 (294)
T d1w6ua_ 143 LEIGKQLIKAQKGAAFLSITTIYAETGS--------------------------------------GFVVPSASAKAGVE 184 (294)
T ss_dssp HHHHHHHHHTTCCEEEEEECCTHHHHCC--------------------------------------TTCHHHHHHHHHHH
T ss_pred hhhhcccccccccccccccccchhhhcc--------------------------------------cccchHHHHHHHHH
Confidence 542 222344556666665432211 01156999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
.+.+.. ..|+.+..+.||.|-.+
T Consensus 185 ~ltk~lA~ela~~gIrVN~I~PG~i~T~ 212 (294)
T d1w6ua_ 185 AMSKSLAAEWGKYGMRFNVIQPGPIKTK 212 (294)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred HHHHHHHHHHhHhCeEEEEEccCccccc
Confidence 988765 35899999999988653
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.20 E-value=1.2e-05 Score=80.29 Aligned_cols=162 Identities=14% Similarity=0.178 Sum_probs=105.1
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..|..+ -+.|.+. +.+|++..|.. +++++..+
T Consensus 4 l~gK~alITGas~GIG~ai----a~~la~~---------------G~~Vi~~~r~~------~~l~~~~~---------- 48 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAA----ALAFARE---------------GAKVIATDINE------SKLQELEK---------- 48 (245)
T ss_dssp TTTCEEEESSTTSHHHHHH----HHHHHHT---------------TCEEEEEESCH------HHHGGGGG----------
T ss_pred CCCCEEEEeCCCCHHHHHH----HHHHHHc---------------CCEEEEEeCCH------HHHHHHHh----------
Confidence 5689999999644444333 3444322 56777777752 23333321
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh---cCceEEEEcCcccCch-------hhHHHHHHhhHHHHHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV---DNIHVVFHCAATVRFD-------AHLKVAVSINLRATKALLEMAKE 321 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~---~~vdiViH~Aa~v~f~-------~~~~~~~~~Nv~gt~~Lle~a~~ 321 (782)
...+.....|+... +..+... ..+|++||+|+..... +.++..+++|+.|+..+.+.+..
T Consensus 49 ----~~~~~~~~~d~~~~------~~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 118 (245)
T d2ag5a1 49 ----YPGIQTRVLDVTKK------KQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLP 118 (245)
T ss_dssp ----STTEEEEECCTTCH------HHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ----ccCCceeeeecccc------ccccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCc
Confidence 12455666777654 4444433 3679999999975431 34567899999999999887542
Q ss_pred ---ccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc
Q psy16243 322 ---MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG 398 (782)
Q Consensus 322 ---~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~ 398 (782)
..+-.++|++||....-.. .+....|+.+|..-+.+++..
T Consensus 119 ~~~~~~~g~Ii~isS~~~~~~~-------------------------------------~~~~~~Y~~sKaal~~l~r~l 161 (245)
T d2ag5a1 119 KMLAQKSGNIINMSSVASSVKG-------------------------------------VVNRCVYSTTKAAVIGLTKSV 161 (245)
T ss_dssp HHHHHTCEEEEEECCSBTTTBC-------------------------------------CTTBHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCceeeeeechhhccCC-------------------------------------ccchhHHHHHHHHHHHHHHHH
Confidence 1245689999886531100 001167999999999988776
Q ss_pred -----CCCCcEEEecCCeEEec
Q psy16243 399 -----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 399 -----~~glp~~IvRp~~v~G~ 415 (782)
..|+.+..+.||.|-.|
T Consensus 162 A~e~~~~gIrvN~I~PG~i~T~ 183 (245)
T d2ag5a1 162 AADFIQQGIRCNCVCPGTVDTP 183 (245)
T ss_dssp HHHHGGGTEEEEEEEESCEECH
T ss_pred HHHhhhhCcEEEEEeeceeech
Confidence 35899999999988764
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.05 E-value=1.5e-05 Score=79.57 Aligned_cols=120 Identities=12% Similarity=0.112 Sum_probs=74.6
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc---------CceEEEEcCcccCc--------hhhHHHHHHhhHHHHHHHHHHH
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD---------NIHVVFHCAATVRF--------DAHLKVAVSINLRATKALLEMA 319 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~---------~vdiViH~Aa~v~f--------~~~~~~~~~~Nv~gt~~Lle~a 319 (782)
.++.++.+|++++ ++++.+++ .+|++||+||.... .+.+++.+++|+.|+..+.+.+
T Consensus 51 ~~~~~~~~Dvs~~------~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 124 (250)
T d1yo6a1 51 SRVHVLPLTVTCD------KSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKL 124 (250)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHT
T ss_pred CceEEEEEecCCH------HHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHH
Confidence 4789999999987 66554432 37999999996421 1345678999999999888774
Q ss_pred H----Hcc----------CCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHH
Q psy16243 320 K----EMK----------QLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYA 385 (782)
Q Consensus 320 ~----~~~----------~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~ 385 (782)
. +.+ ....++.+|+........ .... .......|+
T Consensus 125 ~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~-~~~~------------------------------~~~~~~aY~ 173 (250)
T d1yo6a1 125 LPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN-TSGS------------------------------AQFPVLAYR 173 (250)
T ss_dssp HHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC-CSTT------------------------------SSSCBHHHH
T ss_pred HHHHHHhccCCCCccccceeccccccccccccccCC-cccc------------------------------cchhHHHHH
Confidence 3 111 113455555543221110 0000 000114699
Q ss_pred HHHHHHHHHHHHc-----CCCCcEEEecCCeEE
Q psy16243 386 LTKQVAEDMVRRG-----GAGMPVAMVRPSIVI 413 (782)
Q Consensus 386 ~SK~~aE~ll~~~-----~~glp~~IvRp~~v~ 413 (782)
.||+....+.+.. ..|+.+..+.||.|-
T Consensus 174 aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~ 206 (250)
T d1yo6a1 174 MSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQ 206 (250)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEecCCCC
Confidence 9999998887765 347888888777654
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.05 E-value=2.8e-05 Score=76.87 Aligned_cols=93 Identities=11% Similarity=0.126 Sum_probs=66.3
Q ss_pred CceEEEEcCcccC----ch----hhHHHHHHhhHHHHHHHHHHHHH-ccCCceEEEEecceeccCCCcccccccCCCCCh
Q psy16243 284 NIHVVFHCAATVR----FD----AHLKVAVSINLRATKALLEMAKE-MKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNP 354 (782)
Q Consensus 284 ~vdiViH~Aa~v~----f~----~~~~~~~~~Nv~gt~~Lle~a~~-~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~ 354 (782)
.+|++||+|+... +. +.++..+++|+.|+..+..++.. +++-.++|++||.+.....
T Consensus 71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~-------------- 136 (236)
T d1dhra_ 71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT-------------- 136 (236)
T ss_dssp CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC--------------
T ss_pred CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc--------------
Confidence 4899999998521 11 33456789999999998888654 3334689999998654221
Q ss_pred hHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC-------CCCcEEEecCCeEEe
Q psy16243 355 NHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG-------AGMPVAMVRPSIVIA 414 (782)
Q Consensus 355 ~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~-------~glp~~IvRp~~v~G 414 (782)
|. ...|+.||+..+.+.+... .|+.+..+.||.+.-
T Consensus 137 -------------------~~-----~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T 179 (236)
T d1dhra_ 137 -------------------PG-----MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDT 179 (236)
T ss_dssp -------------------TT-----BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEEC
T ss_pred -------------------cC-----CcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcC
Confidence 11 1589999999999998862 367888888877764
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.05 E-value=2.8e-05 Score=77.77 Aligned_cols=94 Identities=15% Similarity=0.139 Sum_probs=67.7
Q ss_pred CceEEEEcCccc-C---ch----hhHHHHHHhhHHHHHHHHHHHHH-c--cCCceEEEEecceeccCCCcccccccCCCC
Q psy16243 284 NIHVVFHCAATV-R---FD----AHLKVAVSINLRATKALLEMAKE-M--KQLKSFVHVSTAYSNCRQPIIEERFYEPPV 352 (782)
Q Consensus 284 ~vdiViH~Aa~v-~---f~----~~~~~~~~~Nv~gt~~Lle~a~~-~--~~~~~fV~vST~~v~~~~~~i~E~~~~~~~ 352 (782)
.+|++||+|+.. . +. +.++..+++|+.|+..+.+.+.. + .+--++|++||.+......
T Consensus 71 ~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~----------- 139 (252)
T d1zmta1 71 QVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK----------- 139 (252)
T ss_dssp CCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT-----------
T ss_pred CCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccc-----------
Confidence 579999999853 2 21 34567889999999888877432 1 2456899999986542210
Q ss_pred ChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 353 NPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 353 ~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
....|+.||...+.+.+.. ..|+.+..+.||.|-.+
T Consensus 140 ---------------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~ 180 (252)
T d1zmta1 140 ---------------------------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSE 180 (252)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCB
T ss_pred ---------------------------cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCc
Confidence 1157999999999888765 45899999999988654
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.93 E-value=4.1e-05 Score=77.22 Aligned_cols=165 Identities=14% Similarity=0.123 Sum_probs=100.8
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..|..+ -+.|... +.+|++..|... ..++..++...
T Consensus 12 L~GK~alITGassGIG~ai----A~~la~~---------------G~~Vil~~r~~~--~l~~~~~~~~~---------- 60 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREM----AYHLAKM---------------GAHVVVTARSKE--TLQKVVSHCLE---------- 60 (269)
T ss_dssp GTTCEEEESSCSSHHHHHH----HHHHHHT---------------TCEEEEEESCHH--HHHHHHHHHHH----------
T ss_pred cCCCEEEEeCCCcHHHHHH----HHHHHHC---------------CCEEEEEECCHH--HHHHHHHHHhh----------
Confidence 5689999999754433332 3444322 678888888632 12222222211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHH-------hcCceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTL-------VDNIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLE 317 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l-------~~~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle 317 (782)
....++..+..|+++. +....+ ...+|+++++|+.... .+..+..+++|+.|+..+.+
T Consensus 61 --~~~~~~~~~~~d~~~~------~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~ 132 (269)
T d1xu9a_ 61 --LGAASAHYIAGTMEDM------TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTV 132 (269)
T ss_dssp --HTCSEEEEEECCTTCH------HHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHH
T ss_pred --hhcccchhhhhhhhhH------HHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHH
Confidence 1123677788888765 333332 2357999999986432 13455788999999888877
Q ss_pred HHHH-c-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHH
Q psy16243 318 MAKE-M-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 395 (782)
Q Consensus 318 ~a~~-~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll 395 (782)
.+.. + .+--++|.+||.+..... | ....|+.||+..+.+.
T Consensus 133 ~~lp~m~~~~G~ii~isS~~~~~~~---------------------------------p-----~~~~Y~asKaal~~~~ 174 (269)
T d1xu9a_ 133 AALPMLKQSNGSIVVVSSLAGKVAY---------------------------------P-----MVAAYSASKFALDGFF 174 (269)
T ss_dssp HHHHHHHHHTCEEEEEEEGGGTSCC---------------------------------T-----TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcceEeccchhcCCC---------------------------------C-----CchHHHHHHHHHHHHH
Confidence 7542 1 122578999987643211 0 1168999999988877
Q ss_pred HHcC-------CCCcEEEecCCeEE
Q psy16243 396 RRGG-------AGMPVAMVRPSIVI 413 (782)
Q Consensus 396 ~~~~-------~glp~~IvRp~~v~ 413 (782)
+... .++.+..+.||.|-
T Consensus 175 ~~La~El~~~~~~I~V~~v~PG~v~ 199 (269)
T d1xu9a_ 175 SSIRKEYSVSRVNVSITLCVLGLID 199 (269)
T ss_dssp HHHHHHHHHHTCCCEEEEEEECCBC
T ss_pred HHHHHHhhhcCCCEEEEEEecCcCC
Confidence 6652 25677777776654
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.89 E-value=3.5e-05 Score=76.07 Aligned_cols=91 Identities=12% Similarity=0.107 Sum_probs=61.4
Q ss_pred CceEEEEcCcccCc----h----hhHHHHHHhhHHHHHHHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCCh
Q psy16243 284 NIHVVFHCAATVRF----D----AHLKVAVSINLRATKALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNP 354 (782)
Q Consensus 284 ~vdiViH~Aa~v~f----~----~~~~~~~~~Nv~gt~~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~ 354 (782)
.+|++||+|+.... . +.++..+++|+.|+..+.+++... ++-.++|++||.......
T Consensus 71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~-------------- 136 (235)
T d1ooea_ 71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT-------------- 136 (235)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC--------------
T ss_pred CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc--------------
Confidence 47999999985321 1 234457899999999988886543 223579999997643221
Q ss_pred hHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHcC-------CCCcEEEecCCeE
Q psy16243 355 NHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGG-------AGMPVAMVRPSIV 412 (782)
Q Consensus 355 ~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~~-------~glp~~IvRp~~v 412 (782)
|. ...|+.||+..+.+.+... .++.+..+.||.+
T Consensus 137 -------------------~~-----~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~ 177 (235)
T d1ooea_ 137 -------------------PS-----MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTL 177 (235)
T ss_dssp -------------------TT-----BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCB
T ss_pred -------------------cc-----ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcC
Confidence 11 1689999999999988762 2445555565544
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.88 E-value=5.4e-05 Score=76.55 Aligned_cols=74 Identities=18% Similarity=0.091 Sum_probs=54.2
Q ss_pred cceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCc-------hhhHHHHHHhhHHHHHHHHHHHHHc
Q psy16243 257 SKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRF-------DAHLKVAVSINLRATKALLEMAKEM 322 (782)
Q Consensus 257 ~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f-------~~~~~~~~~~Nv~gt~~Lle~a~~~ 322 (782)
.++.++.+|+++. ++.+++++ .+|++||+||.... .+.++..+++|+.|+..+.+.+...
T Consensus 53 ~~~~~~~~Dvs~~------~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~ 126 (275)
T d1wmaa1 53 LSPRFHQLDIDDL------QSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL 126 (275)
T ss_dssp CCCEEEECCTTCH------HHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred CcEEEEEEecCCH------HHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678899999997 66655443 57999999997422 2345568899999999999886532
Q ss_pred -cCCceEEEEeccee
Q psy16243 323 -KQLKSFVHVSTAYS 336 (782)
Q Consensus 323 -~~~~~fV~vST~~v 336 (782)
+.-.++|.+||...
T Consensus 127 m~~~g~ivnisS~~~ 141 (275)
T d1wmaa1 127 IKPQGRVVNVSSIMS 141 (275)
T ss_dssp EEEEEEEEEECCHHH
T ss_pred HHhcCCcccccccce
Confidence 22257999999754
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=97.80 E-value=0.00023 Score=70.84 Aligned_cols=167 Identities=17% Similarity=0.115 Sum_probs=101.5
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+..| +..+.-+.|..+ +.+|++..|..+ ..+++++....
T Consensus 3 L~gK~~lITGass~~G--IG~aiA~~l~~~---------------G~~V~i~~~~~~---~~~~~~~~~~~--------- 53 (258)
T d1qsga_ 3 LSGKRILVTGVASKLS--IAYGIAQAMHRE---------------GAELAFTYQNDK---LKGRVEEFAAQ--------- 53 (258)
T ss_dssp TTTCEEEECCCCSTTS--HHHHHHHHHHHT---------------TCEEEEEESSTT---THHHHHHHHHH---------
T ss_pred CCCCEEEEECCCCchh--HHHHHHHHHHHc---------------CCEEEEEeCCHH---HHHHHHHHHhh---------
Confidence 4589999999544333 322333444322 567777777533 23333333211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch------------hhHHHHHHhhHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD------------AHLKVAVSINLRAT 312 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~------------~~~~~~~~~Nv~gt 312 (782)
..+...+..|+++. .+.....+ ..|+++|+|+..... +.......+|+.+.
T Consensus 54 ----~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (258)
T d1qsga_ 54 ----LGSDIVLQCDVAED------ASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSF 123 (258)
T ss_dssp ----TTCCCEEECCTTCH------HHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHH
T ss_pred ----cCCcceeecccchH------HHHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHH
Confidence 12455667777665 44433332 359999999764322 11234566788888
Q ss_pred HHHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHH
Q psy16243 313 KALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVA 391 (782)
Q Consensus 313 ~~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~a 391 (782)
..+.+.+... ++-..+|++||....... +....|+.||..-
T Consensus 124 ~~~~~~~~~~~~~~~~Ii~iss~~~~~~~--------------------------------------~~~~~Y~~sKaal 165 (258)
T d1qsga_ 124 VAMAKACRSMLNPGSALLTLSYLGAERAI--------------------------------------PNYNVMGLAKASL 165 (258)
T ss_dssp HHHHHHHGGGEEEEEEEEEEECGGGTSBC--------------------------------------TTTTHHHHHHHHH
T ss_pred HHHHHHHHHhccCCcEEEEecchhhccCC--------------------------------------CCcHHHHHHHHHH
Confidence 8888776543 223467888887532210 0116799999999
Q ss_pred HHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 392 EDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 392 E~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
+.+.+.. ..|+.+..++||.|..+
T Consensus 166 ~~ltr~lA~el~~~gIrVN~I~PG~i~T~ 194 (258)
T d1qsga_ 166 EANVRYMANAMGPEGVRVNAISAGPIRTL 194 (258)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHhCccCceeecccccccccc
Confidence 9988766 45899999999988754
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=97.69 E-value=0.00063 Score=68.15 Aligned_cols=166 Identities=15% Similarity=0.067 Sum_probs=93.0
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
+.+|+++|||..+.-|.| .+.-+.|.+ ++.+|++.-|... ..++++++.+.
T Consensus 3 L~gK~alITGaag~~GIG--~AiA~~la~---------------~Ga~V~i~~r~~~---~~~~~~~l~~~--------- 53 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIA--YGIAQSCFN---------------QGATLAFTYLNES---LEKRVRPIAQE--------- 53 (274)
T ss_dssp TTTCEEEEECCCSTTSHH--HHHHHHHHT---------------TTCEEEEEESSTT---THHHHHHHHHH---------
T ss_pred CCCCEEEEECCCCCcHHH--HHHHHHHHH---------------CCCEEEEEeCCHH---HHHHHHHHHhh---------
Confidence 458999999954433333 333444433 2678888888643 33344433221
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh-------cCceEEEEcCcccCch--------hhHHHHH---HhhHHHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV-------DNIHVVFHCAATVRFD--------AHLKVAV---SINLRATK 313 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~-------~~vdiViH~Aa~v~f~--------~~~~~~~---~~Nv~gt~ 313 (782)
.....+...|++++ ++.+.++ ..+|+++|+|+..... ....... ..+..+..
T Consensus 54 ----~~~~~~~~~d~~~~------~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (274)
T d2pd4a1 54 ----LNSPYVYELDVSKE------EHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLI 123 (274)
T ss_dssp ----TTCCCEEECCTTCH------HHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred ----CCceeEeeecccch------hhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccc
Confidence 12445678888876 5555544 3579999999864321 1112222 22333344
Q ss_pred HHHHHHHHccCCce-EEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHH
Q psy16243 314 ALLEMAKEMKQLKS-FVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAE 392 (782)
Q Consensus 314 ~Lle~a~~~~~~~~-fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE 392 (782)
.+........+-.. ++.+|+....... .....|+.+|...+
T Consensus 124 ~~~~~~~~~~~~~~~i~~~s~~~~~~~~--------------------------------------~~~~~y~asK~al~ 165 (274)
T d2pd4a1 124 ELTNTLKPLLNNGASVLTLSYLGSTKYM--------------------------------------AHYNVMGLAKAALE 165 (274)
T ss_dssp HHHHHHGGGEEEEEEEEEEECGGGTSBC--------------------------------------TTCHHHHHHHHHHH
T ss_pred ccccccccccccCcceeeeccccccccc--------------------------------------ccchhhhHHHHHHH
Confidence 44443333223334 3333333322211 12268999999999
Q ss_pred HHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 393 DMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 393 ~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
.+.+.. ..|+++..+.||.+.-
T Consensus 166 ~ltr~lA~e~~~~GIrvN~I~PG~v~T 192 (274)
T d2pd4a1 166 SAVRYLAVDLGKHHIRVNALSAGPIRT 192 (274)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred HHHHhhHHHhcCcCceecccccCcccC
Confidence 988754 4689999999987764
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=97.61 E-value=0.00017 Score=72.13 Aligned_cols=166 Identities=12% Similarity=0.050 Sum_probs=96.7
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+.-|.|. +.-+.|..+ +.+|++..|.+. ...+++.+..
T Consensus 4 l~gK~~lItGaag~~GIG~--aiA~~la~~---------------Ga~Vil~~~~~~--~~~~~~~~~~----------- 53 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAF--HIARVAQEQ---------------GAQLVLTGFDRL--RLIQRITDRL----------- 53 (268)
T ss_dssp TTTCEEEECCCSSTTCHHH--HHHHHHHHT---------------TCEEEEEECSCH--HHHHHHHTTS-----------
T ss_pred CCCCEEEEECCCCCCHHHH--HHHHHHHHc---------------CCEEEEEeCChH--HHHHHHHHHc-----------
Confidence 4589999999655544444 222333322 567777666532 2223332211
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh----------cCceEEEEcCcccCc---------h---hhHHHHHHhhH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV----------DNIHVVFHCAATVRF---------D---AHLKVAVSINL 309 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~----------~~vdiViH~Aa~v~f---------~---~~~~~~~~~Nv 309 (782)
..+...+.+|++++ ++.+.++ ..+|+++|+|+.... + ......+.+|+
T Consensus 54 ----~~~~~~~~~dv~~~------~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (268)
T d2h7ma1 54 ----PAKAPLLELDVQNE------EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISA 123 (268)
T ss_dssp ----SSCCCEEECCTTCH------HHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHT
T ss_pred ----CCceeeEeeecccc------cccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhh
Confidence 23567789999986 4444332 236999999985321 1 12223456666
Q ss_pred HHHHHHHHHHHHccCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHH
Q psy16243 310 RATKALLEMAKEMKQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQ 389 (782)
Q Consensus 310 ~gt~~Lle~a~~~~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~ 389 (782)
.+.......+....+-...+.++|....... +....|+.+|.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~--------------------------------------p~~~~y~~sK~ 165 (268)
T d2h7ma1 124 YSYASMAKALLPIMNPGGSIVGMDFDPSRAM--------------------------------------PAYNWMTVAKS 165 (268)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEEECCCSSCC--------------------------------------TTTHHHHHHHH
T ss_pred hHHHHHHHHHhhhcccccccccccccccccC--------------------------------------cccchhhcccc
Confidence 6666666655543233334444443322110 11268999999
Q ss_pred HHHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 390 VAEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 390 ~aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
..+.+.+.. ..|+.+..+.||.+-.+
T Consensus 166 a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~ 196 (268)
T d2h7ma1 166 ALESVNRFVAREAGKYGVRSNLVAAGPIRTL 196 (268)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred chhhccccchhhhhccCCcceEEecCCCCCh
Confidence 999988765 45899999999987654
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.55 E-value=0.00022 Score=70.70 Aligned_cols=162 Identities=16% Similarity=0.134 Sum_probs=100.6
Q ss_pred cCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhccccccccccc
Q psy16243 172 YLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRKR 251 (782)
Q Consensus 172 ~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~~ 251 (782)
..+|+++|||..+..| .+.-+.|.+. +.+|++..|.... .++..+++
T Consensus 3 lkGKvalITGas~GIG----~aia~~la~~---------------G~~V~~~~r~~~~--~~~~~~~l------------ 49 (248)
T d2o23a1 3 VKGLVAVITGGASGLG----LATAERLVGQ---------------GASAVLLDLPNSG--GEAQAKKL------------ 49 (248)
T ss_dssp CTTCEEEEETTTSHHH----HHHHHHHHHT---------------TCEEEEEECTTSS--HHHHHHHH------------
T ss_pred CCCCEEEEeCCCCHHH----HHHHHHHHHC---------------CCEEEEEeCChHH--HHHHHHHh------------
Confidence 4589999999643333 2223444332 6788888886432 22333322
Q ss_pred CcccccceeEEecCCCCCCCCCCHHhHHHHh-------cCceEEEEcCcccCc-------------hhhHHHHHHhhHHH
Q psy16243 252 CPHYLSKMVAVTGDCLKPGVGINSEDRQTLV-------DNIHVVFHCAATVRF-------------DAHLKVAVSINLRA 311 (782)
Q Consensus 252 ~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~-------~~vdiViH~Aa~v~f-------------~~~~~~~~~~Nv~g 311 (782)
..+......|+.+. .+.+... ...|..+++++.... .+.++..+++|+.|
T Consensus 50 ----~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~ 119 (248)
T d2o23a1 50 ----GNNCVFAPADVTSE------KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 119 (248)
T ss_dssp ----CTTEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHH
T ss_pred ----CCCccccccccccc------ccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHH
Confidence 12455566666654 3333222 235777777654211 13456788999999
Q ss_pred HHHHHHHHHHc---------cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCCc
Q psy16243 312 TKALLEMAKEM---------KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPN 382 (782)
Q Consensus 312 t~~Lle~a~~~---------~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn 382 (782)
+..+.+++... .+--++|++||.+..... | ...
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~---------------------------------~-----~~~ 161 (248)
T d2o23a1 120 TFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ---------------------------------V-----GQA 161 (248)
T ss_dssp HHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC---------------------------------T-----TCH
T ss_pred HHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC---------------------------------C-----Cch
Confidence 99999886442 012379999998754221 0 115
Q ss_pred cHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 383 TYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 383 ~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
.|+.||...+.+.+.. ..|+.+..+.||.+..
T Consensus 162 ~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T 198 (248)
T d2o23a1 162 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGT 198 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceec
Confidence 7999999999998776 3588999999987754
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.17 E-value=0.0013 Score=67.88 Aligned_cols=95 Identities=15% Similarity=0.120 Sum_probs=66.4
Q ss_pred cCceEEEEcCcccC-----ch----hhHHHHHHhhHHHHHHHHHHHHHc-cCCceEEEEecceeccCCCcccccccCCCC
Q psy16243 283 DNIHVVFHCAATVR-----FD----AHLKVAVSINLRATKALLEMAKEM-KQLKSFVHVSTAYSNCRQPIIEERFYEPPV 352 (782)
Q Consensus 283 ~~vdiViH~Aa~v~-----f~----~~~~~~~~~Nv~gt~~Lle~a~~~-~~~~~fV~vST~~v~~~~~~i~E~~~~~~~ 352 (782)
.++|+++|+||... +. +.+...+++|+.|+..+.+.+... +.-.++|.+||.......
T Consensus 112 G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~~------------ 179 (329)
T d1uh5a_ 112 GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV------------ 179 (329)
T ss_dssp CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC------------
T ss_pred CCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccceeehhcccc------------
Confidence 46899999998532 21 345678899999998888876543 333578888876533210
Q ss_pred ChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc----C--CCCcEEEecCCeEEe
Q psy16243 353 NPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG----G--AGMPVAMVRPSIVIA 414 (782)
Q Consensus 353 ~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~----~--~glp~~IvRp~~v~G 414 (782)
| .+...|+.||...|.+.+.. . .|+++..+.||.|--
T Consensus 180 ---------------------p----~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 180 ---------------------P----GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222 (329)
T ss_dssp ---------------------T----TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred ---------------------c----ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence 1 12257999999999888765 2 389999999997743
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.10 E-value=0.0069 Score=60.86 Aligned_cols=96 Identities=14% Similarity=0.046 Sum_probs=62.5
Q ss_pred cCceEEEEcCcccC-----ch----hhHHHHHHhhHHHHHHHHHHHHHcc-CCceEEEEecceeccCCCcccccccCCCC
Q psy16243 283 DNIHVVFHCAATVR-----FD----AHLKVAVSINLRATKALLEMAKEMK-QLKSFVHVSTAYSNCRQPIIEERFYEPPV 352 (782)
Q Consensus 283 ~~vdiViH~Aa~v~-----f~----~~~~~~~~~Nv~gt~~Lle~a~~~~-~~~~fV~vST~~v~~~~~~i~E~~~~~~~ 352 (782)
..+|++||+||... +. +.+...+++|+.++..+...+.... .-...+.+|+........
T Consensus 118 G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------- 186 (297)
T d1d7oa_ 118 GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIP----------- 186 (297)
T ss_dssp SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT-----------
T ss_pred CCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhccccc-----------
Confidence 36899999998632 21 3355688899999999888765431 112345555543221110
Q ss_pred ChhHHHHHHHhcchhhhhhhcCCccCCCCccHHHHHHHHHHHHHHc------CCCCcEEEecCCeEEec
Q psy16243 353 NPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRG------GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 353 ~~~~~~~~~~~l~~~~~~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~------~~glp~~IvRp~~v~G~ 415 (782)
.....|+.+|...+.+.... ..|+.+..+.||.+..+
T Consensus 187 --------------------------~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~ 229 (297)
T d1d7oa_ 187 --------------------------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSR 229 (297)
T ss_dssp --------------------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCC
T ss_pred --------------------------ccccceecccccccccccccchhccccceEEecccccccccch
Confidence 11267999999888877653 24899999999988654
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=96.68 E-value=0.0048 Score=61.61 Aligned_cols=109 Identities=16% Similarity=0.069 Sum_probs=66.7
Q ss_pred eeEEecCCCCCCCCCCHHhHHHHhc-------CceEEEEcCcccCch---------------------hhHHHHHHhhHH
Q psy16243 259 MVAVTGDCLKPGVGINSEDRQTLVD-------NIHVVFHCAATVRFD---------------------AHLKVAVSINLR 310 (782)
Q Consensus 259 v~~i~gDi~~~~lGl~~~~~~~l~~-------~vdiViH~Aa~v~f~---------------------~~~~~~~~~Nv~ 310 (782)
+....+|+++. ++.+++++ .+|++||+|+..... ......+.+|+.
T Consensus 72 ~~~~~~dv~~~------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 145 (284)
T d1e7wa_ 72 GADGSAPVTLF------TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAI 145 (284)
T ss_dssp ----CCCBCHH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTH
T ss_pred cccccccCCCH------HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhhee
Confidence 34455566655 55665543 579999999974211 012235788999
Q ss_pred HHHHHHHHHHHc---------cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhhhhhcCCccCCCC
Q psy16243 311 ATKALLEMAKEM---------KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWP 381 (782)
Q Consensus 311 gt~~Lle~a~~~---------~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~p 381 (782)
++..+.+.+... ++.-++|.+||....... ...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~--------------------------------------~~~ 187 (284)
T d1e7wa_ 146 APYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL--------------------------------------LGY 187 (284)
T ss_dssp HHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC--------------------------------------TTC
T ss_pred eeeeeeccccchhhhhHHHhcCCCCcccccccccccCCc--------------------------------------cce
Confidence 998888775432 122356666655432110 011
Q ss_pred ccHHHHHHHHHHHHHHc-----CCCCcEEEecCCe
Q psy16243 382 NTYALTKQVAEDMVRRG-----GAGMPVAMVRPSI 411 (782)
Q Consensus 382 n~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~ 411 (782)
..|+.||...+.+.+.. ..|+.+..+.||.
T Consensus 188 ~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~ 222 (284)
T d1e7wa_ 188 TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 222 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred eeeccccccchhhhHHHHHHhCCcccccccccccc
Confidence 57999999999988776 3588888888874
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.61 E-value=0.0024 Score=62.16 Aligned_cols=78 Identities=21% Similarity=0.200 Sum_probs=55.1
Q ss_pred hhHHHHHHhhHHHHHHHHHHHHHc---------cCCceEEEEecceeccCCCcccccccCCCCChhHHHHHHHhcchhhh
Q psy16243 299 AHLKVAVSINLRATKALLEMAKEM---------KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQITELLNDDMI 369 (782)
Q Consensus 299 ~~~~~~~~~Nv~gt~~Lle~a~~~---------~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~~~~l~~~~~ 369 (782)
+..+..+++|+.+...+...+... .+--++|++||.......
T Consensus 91 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~----------------------------- 141 (241)
T d1uaya_ 91 ESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ----------------------------- 141 (241)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC-----------------------------
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCC-----------------------------
Confidence 345567889999888887765332 123479999998654221
Q ss_pred hhhcCCccCCCCccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEe
Q psy16243 370 DKITPGIVDYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIA 414 (782)
Q Consensus 370 ~~~~p~~~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G 414 (782)
+....|+.||+..+.+.+.. ..|+.+..+.||.+..
T Consensus 142 ---------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T 182 (241)
T d1uaya_ 142 ---------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDT 182 (241)
T ss_dssp ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSS
T ss_pred ---------CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccc
Confidence 01168999999999988766 3589999999987754
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=95.45 E-value=0.0044 Score=58.33 Aligned_cols=83 Identities=16% Similarity=0.107 Sum_probs=53.6
Q ss_pred ccCCCeeEeeccccCCCCCCChhhHHhhhccceeEEeeceeeeecccceeeeeecccchhhHHHHHHHhhcccccccccc
Q psy16243 171 HYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEMKQLKFFDPMRK 250 (782)
Q Consensus 171 ~~~~k~vlvTG~~~~~g~Gl~~~~~~~L~~~v~iv~hlaa~v~~~~~~~i~~LvR~~~~~~~~erl~~~~~~~~f~~l~~ 250 (782)
.+.+|+++|||..+..|..+ -+.|.. .+.+|++..|... ...+..+++..
T Consensus 20 ~l~gK~vlItGasgGIG~~i----a~~la~---------------~G~~V~~~~r~~~--~~~~~~~~~~~--------- 69 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRS----AALLAG---------------EGAEVVLCGRKLD--KAQAAADSVNK--------- 69 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHH----HHHHHH---------------TTCEEEEEESSHH--HHHHHHHHHHH---------
T ss_pred CCCCCEEEEECCCHHHHHHH----HHHHHh---------------hccchhhcccchH--HHHHHHHHHHh---------
Confidence 45689999999654444333 223322 2578888888632 12222222211
Q ss_pred cCcccccceeEEecCCCCCCCCCCHHhHHHHhcCceEEEEcCcc
Q psy16243 251 RCPHYLSKMVAVTGDCLKPGVGINSEDRQTLVDNIHVVFHCAAT 294 (782)
Q Consensus 251 ~~~~~~~kv~~i~gDi~~~~lGl~~~~~~~l~~~vdiViH~Aa~ 294 (782)
..++....+|++++ +++++.++++|+|||+|+.
T Consensus 70 -----~~~~~~~~~d~~~~------~~~~~~~~~iDilin~Ag~ 102 (191)
T d1luaa1 70 -----RFKVNVTAAETADD------ASRAEAVKGAHFVFTAGAI 102 (191)
T ss_dssp -----HHTCCCEEEECCSH------HHHHHHTTTCSEEEECCCT
T ss_pred -----ccchhhhhhhcccH------HHHHHHhcCcCeeeecCcc
Confidence 13556788899887 8899999999999999985
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=94.88 E-value=0.12 Score=50.27 Aligned_cols=32 Identities=19% Similarity=0.374 Sum_probs=26.6
Q ss_pred ccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEE
Q psy16243 382 NTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVI 413 (782)
Q Consensus 382 n~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~ 413 (782)
..|+.||+.-+.+.+.. ..|+.+..+.||.+.
T Consensus 170 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~ 206 (266)
T d1mxha_ 170 CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSL 206 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred hhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEe
Confidence 68999999999888765 358999999998764
|
| >d2gdwa1 a.28.1.2 (A:8-83) Peptidyl carrier protein (PCP), thioester domain {Bacillus brevis [TaxId: 1393]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Peptidyl carrier domain domain: Peptidyl carrier protein (PCP), thioester domain species: Bacillus brevis [TaxId: 1393]
Probab=94.44 E-value=0.0065 Score=47.96 Aligned_cols=52 Identities=12% Similarity=0.110 Sum_probs=45.3
Q ss_pred CCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHH
Q psy16243 78 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQV 129 (782)
Q Consensus 78 ~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L 129 (782)
+...++++||+.|.||+.+++++..+++...-.+.+..++.+|+...+++++
T Consensus 23 ~~i~~~~~f~~lG~dSl~a~~l~~~i~~~~~~~l~~~~l~~~pTi~~LA~~i 74 (76)
T d2gdwa1 23 SGIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYV 74 (76)
T ss_dssp SCCCTTTTSSTTTCTTHHHHHHHHHHHHTTSSCCTTHHHHHSCSHHHHHHHH
T ss_pred CCCCCCCCHHHcCCChHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHh
Confidence 3467799999999999999999999999887778888899999998887765
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=94.38 E-value=0.0049 Score=63.89 Aligned_cols=108 Identities=16% Similarity=-0.090 Sum_probs=62.8
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEeccccc------------------ccc---ccccccCCCCCCeEEEEecc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL------------------NSC---LPGERLDHYTTESFVHVSTA 73 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~------------------~~~---~~~~~~~~~~l~~f~hvsta 73 (782)
.++..+.||+...+. +..-.+.-.+++||||||.. ++. ..++....++..+|+|+||+
T Consensus 55 ~~~~~~~~Dl~d~~~-~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~ 133 (357)
T d1db3a_ 55 PKFHLHYGDLSDTSN-LTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTS 133 (357)
T ss_dssp CCEEECCCCSSCHHH-HHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG
T ss_pred CCeEEEEeecCCHHH-HHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEch
Confidence 467788899865533 11101111258999999851 111 22222334566789999997
Q ss_pred cccCC--CCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCC-ccchhhHHHHHHHHHhc--CCCCeEEEeCC
Q psy16243 74 YSNCR--QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWP-NTYALTKQVAEDMVRRG--GAGMPVAMVRP 148 (782)
Q Consensus 74 ~~~~~--~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~P-nt~~l~k~L~E~Ll~~~--~~~~~~~ivRp 148 (782)
..-+. ...++|+--. +| |.|..+|...|.++... ..+.+++++||
T Consensus 134 ~vYG~~~~~~~~E~~~~------------------------------~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~ 183 (357)
T d1db3a_ 134 ELYGLVQEIPQKETTPF------------------------------YPRSPYAVAKLYAYWITVNYRESYGMYACNGIL 183 (357)
T ss_dssp GGGTTCCSSSBCTTSCC------------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred hhhCCCCCCCcCCCCCC------------------------------CCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 65432 2222332100 12 34999999999988752 22578889998
Q ss_pred Ccccc
Q psy16243 149 SIDLG 153 (782)
Q Consensus 149 s~~~~ 153 (782)
..+.+
T Consensus 184 ~~vyG 188 (357)
T d1db3a_ 184 FNHES 188 (357)
T ss_dssp CCEEC
T ss_pred ccccC
Confidence 77654
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=94.03 E-value=0.36 Score=46.38 Aligned_cols=121 Identities=17% Similarity=0.083 Sum_probs=62.4
Q ss_pred CceEEEEcCcccCchhhHHHHHHhhHHHHHHHHHHHHHc---cCCceEEEEecceeccCCCcccccccCCCCChhHHHHH
Q psy16243 284 NIHVVFHCAATVRFDAHLKVAVSINLRATKALLEMAKEM---KQLKSFVHVSTAYSNCRQPIIEERFYEPPVNPNHLIQI 360 (782)
Q Consensus 284 ~vdiViH~Aa~v~f~~~~~~~~~~Nv~gt~~Lle~a~~~---~~~~~fV~vST~~v~~~~~~i~E~~~~~~~~~~~~~~~ 360 (782)
.+|+++|+|+.............+|..|...+.+..... ........+++........... + ... .
T Consensus 62 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~--~ 130 (257)
T d1fjha_ 62 GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKN----P-----LAL--A 130 (257)
T ss_dssp CCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGC----T-----THH--H
T ss_pred CCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhh----h-----hhh--h
Confidence 479999999876655666777788888887776653321 1344455555443221110000 0 000 0
Q ss_pred HHhcchhhhhhhcCCc-cCCCCccHHHHHHHHHHHHHHc-----CCCCcEEEecCCeEEec
Q psy16243 361 TELLNDDMIDKITPGI-VDYWPNTYALTKQVAEDMVRRG-----GAGMPVAMVRPSIVIAT 415 (782)
Q Consensus 361 ~~~l~~~~~~~~~p~~-~~~~pn~Y~~SK~~aE~ll~~~-----~~glp~~IvRp~~v~G~ 415 (782)
...-..-.+....... ..+....|+.||...+.+.+.. ..|+.+..+.||.+-.+
T Consensus 131 ~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~ 191 (257)
T d1fjha_ 131 LEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETP 191 (257)
T ss_dssp HHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----
T ss_pred ccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCCh
Confidence 0000000000000000 0000135999999999998876 35899999999988654
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.98 E-value=0.073 Score=50.99 Aligned_cols=98 Identities=11% Similarity=-0.078 Sum_probs=64.3
Q ss_pred hccccceeeecCcCccCCCCCCccccCceeEEEecccc---------------ccccccccccCCCCCCeEEEEeccccc
Q psy16243 12 QRFEEIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS---------------LNSCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 12 ~~~~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~---------------~~~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
.....+.+..+|+..++... .....++++||||+. ..+..+++.....+.++|+|+||+.+.
T Consensus 56 ~~~~~i~~~~~D~~~~~~~~---~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~ 132 (232)
T d2bkaa1 56 EAYKNVNQEVVDFEKLDDYA---SAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGAD 132 (232)
T ss_dssp GGGGGCEEEECCGGGGGGGG---GGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCC
T ss_pred cccceeeeeeeccccccccc---ccccccccccccccccccccchhhhhhhcccccceeeecccccCccccccCCccccc
Confidence 34567788889987664322 234458999999986 122333444344568999999998763
Q ss_pred CCCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHhcCCCCeEEEeCCCcccc
Q psy16243 77 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRRGGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 77 ~~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~~~~~~~~~ivRps~~~~ 153 (782)
... ++.|.-+|..+|+.+...+ ...++++||+.+.+
T Consensus 133 ~~~----------------------------------------~~~Y~~~K~~~E~~l~~~~-~~~~~IlRP~~i~G 168 (232)
T d2bkaa1 133 KSS----------------------------------------NFLYLQVKGEVEAKVEELK-FDRYSVFRPGVLLC 168 (232)
T ss_dssp TTC----------------------------------------SSHHHHHHHHHHHHHHTTC-CSEEEEEECCEEEC
T ss_pred cCc----------------------------------------cchhHHHHHHhhhcccccc-ccceEEecCceeec
Confidence 221 1236677888998887632 22478999998765
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.65 E-value=0.025 Score=57.87 Aligned_cols=112 Identities=21% Similarity=0.091 Sum_probs=66.6
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccc------------------ccccccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS------------------LNSCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~------------------~~~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
..+..+.||+..++. +..-.....+++|||+||. .++..+.+..+..+.++|+|+||....
T Consensus 51 ~~v~~~~~Dl~d~~~-l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vy 129 (347)
T d1z45a2 51 HHIPFYEVDLCDRKG-LEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVY 129 (347)
T ss_dssp SCCCEEECCTTCHHH-HHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGG
T ss_pred cCCeEEEeecCCHHH-HHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeee
Confidence 356778899876643 1110122248999999995 333344444444567899999997776
Q ss_pred CCCCC--cceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCC-ccchhhHHHHHHHHHh----cCCCCeEEEeCCC
Q psy16243 77 CRQPI--IEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWP-NTYALTKQVAEDMVRR----GGAGMPVAMVRPS 149 (782)
Q Consensus 77 ~~~~~--ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~P-nt~~l~k~L~E~Ll~~----~~~~~~~~ivRps 149 (782)
+.... .++.+-+. .| ..| +.|..+|.+.|+++.. .....+++++|+.
T Consensus 130 g~~~~~~~~~~~~e~----------------------~~----~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~ 183 (347)
T d1z45a2 130 GDATRFPNMIPIPEE----------------------CP----LGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYF 183 (347)
T ss_dssp CCGGGSTTCCSBCTT----------------------SC----CCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEEC
T ss_pred cCcccCCCCCccccc----------------------cC----CCCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeec
Confidence 53221 01111000 00 011 3489999999988764 3456778888877
Q ss_pred cccc
Q psy16243 150 IDLG 153 (782)
Q Consensus 150 ~~~~ 153 (782)
.+.+
T Consensus 184 ~v~g 187 (347)
T d1z45a2 184 NPIG 187 (347)
T ss_dssp EEEC
T ss_pred ceEe
Confidence 6653
|
| >d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Actinorhodin polyketide synthase acyl carrier protein, ACT ACP species: Streptomyces coelicolor, A3(2) [TaxId: 1902]
Probab=91.32 E-value=0.048 Score=43.76 Aligned_cols=57 Identities=11% Similarity=0.103 Sum_probs=49.6
Q ss_pred CCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHH
Q psy16243 78 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMV 134 (782)
Q Consensus 78 ~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll 134 (782)
++...|..|++.|+||..+++++..+.+...-.+.+..++.+|+...+..++.+.+-
T Consensus 27 ~~i~~d~~f~dlG~DSl~~~~l~~~l~~~~g~~l~~~~~~~~~Tv~~l~~~i~~~l~ 83 (86)
T d2af8a_ 27 SGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALA 83 (86)
T ss_dssp SSCSCSSSHHHHTCSSHHHHHHHHHHHHHHTCCCCCSTTTTCCCHHHHHHHHHHHHH
T ss_pred cccccCCCHHHcCCCHHHHHHHHHHHHHHHccCcCHHHHHcCCCHHHHHHHHHHHhh
Confidence 455567889999999999999999999999888889999999999988888776654
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=89.23 E-value=0.053 Score=55.12 Aligned_cols=112 Identities=15% Similarity=0.094 Sum_probs=65.8
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccc------------------ccccccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS------------------LNSCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~------------------~~~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
..+..+.||+...+. +..--+...+++|||+||. .++.-+.+..+..+.++|+|+||..+.
T Consensus 50 ~~~~~~~~Dl~d~~~-l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy 128 (338)
T d1udca_ 50 KHPTFVEGDIRNEAL-MTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVY 128 (338)
T ss_dssp SCCEEEECCTTCHHH-HHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGG
T ss_pred CCCEEEEeecCCHHH-HHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEE
Confidence 357888999987753 3221122248999999985 222233333333467999999998765
Q ss_pred CCCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHh---cCCCCeEEEeCCCcccc
Q psy16243 77 CRQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR---GGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 77 ~~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~---~~~~~~~~ivRps~~~~ 153 (782)
.+... ....+. .+ ...-.+.|..+|...|.++.. .....+++++|+..+.+
T Consensus 129 ~~~~~--~~~~e~----------------------~~--~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G 182 (338)
T d1udca_ 129 GDQPK--IPYVES----------------------FP--TGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVG 182 (338)
T ss_dssp CSCCS--SSBCTT----------------------SC--CCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEEC
T ss_pred ccccc--cccccc----------------------cc--cCCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEe
Confidence 43221 000000 00 001123488889998888764 23467888889887654
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=88.69 E-value=0.079 Score=53.27 Aligned_cols=106 Identities=18% Similarity=0.024 Sum_probs=66.4
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccc------------------ccccccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS------------------LNSCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~------------------~~~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
.+++.+.||+..+.... ......+.|||+|+. .++.-+.+.+...+.++|+|.||+...
T Consensus 55 ~~~~~~~~d~~~~~~~~---~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~y 131 (322)
T d1r6da_ 55 PRLRFVHGDIRDAGLLA---RELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVY 131 (322)
T ss_dssp TTEEEEECCTTCHHHHH---HHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGG
T ss_pred CCeEEEEeccccchhhh---ccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceee
Confidence 45778889887664311 234458899999975 122222223222356899999999887
Q ss_pred CCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCC-ccchhhHHHHHHHHHh--cCCCCeEEEeCCCcc
Q psy16243 77 CRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWP-NTYALTKQVAEDMVRR--GGAGMPVAMVRPSID 151 (782)
Q Consensus 77 ~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~P-nt~~l~k~L~E~Ll~~--~~~~~~~~ivRps~~ 151 (782)
++.. .++|+.-. .| +.|..+|...|.++.. ...+.+++++|+..+
T Consensus 132 g~~~~~~~~E~~~~------------------------------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v 181 (322)
T d1r6da_ 132 GSIDSGSWTESSPL------------------------------EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNN 181 (322)
T ss_dssp CCCSSSCBCTTSCC------------------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEE
T ss_pred cCCCCCCCCCCCCC------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeE
Confidence 6432 12222110 11 3488999999988875 223578899998887
Q ss_pred cc
Q psy16243 152 LG 153 (782)
Q Consensus 152 ~~ 153 (782)
.+
T Consensus 182 yG 183 (322)
T d1r6da_ 182 YG 183 (322)
T ss_dssp EC
T ss_pred EC
Confidence 65
|
| >d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Oxytetracycline polyketide synthase acyl carrier species: Streptomyces rimosus [TaxId: 1927]
Probab=86.70 E-value=0.12 Score=42.06 Aligned_cols=58 Identities=10% Similarity=0.059 Sum_probs=50.3
Q ss_pred CCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHh
Q psy16243 79 QPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR 136 (782)
Q Consensus 79 ~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~ 136 (782)
....|..|++.|+||+.+++++..+.+...-.+.+..++.+|+...+..++.+++-..
T Consensus 27 ~i~~d~~f~dlG~DSl~~~el~~~le~~~gv~l~~~~~~~~~Ti~~l~~~l~~~l~~~ 84 (95)
T d1nq4a_ 27 GDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASLTGA 84 (95)
T ss_dssp SCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHHHHHT
T ss_pred hcccCCCHHHcCCcHHHHHHHHHHHHHHhcCCCCHHHHhcCCCHHHHHHHHHHhccCC
Confidence 4456778999999999999999999999887888999999999999999888877554
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.63 E-value=0.095 Score=53.04 Aligned_cols=107 Identities=12% Similarity=-0.032 Sum_probs=61.5
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccc------------------cccccccccc---CCCCCCeEEEEeccc
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS------------------LNSCLPGERL---DHYTTESFVHVSTAY 74 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~------------------~~~~~~~~~~---~~~~l~~f~hvsta~ 74 (782)
.+..+.||+..++..... .......+++|+||. .++..+.+.+ ...+..+|+|+||+.
T Consensus 57 ~~~~~~~Dl~d~~~~~~~-~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~ 135 (347)
T d1t2aa_ 57 NMKLHYGDLTDSTCLVKI-INEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE 135 (347)
T ss_dssp CEEEEECCTTCHHHHHHH-HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG
T ss_pred CcEEEEeecCCchhhHHH-HhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchh
Confidence 456788888766542211 111135688888774 2333333333 344567999999976
Q ss_pred ccCCC--CCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCC-ccchhhHHHHHHHHHh--cCCCCeEEEeCCC
Q psy16243 75 SNCRQ--PIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWP-NTYALTKQVAEDMVRR--GGAGMPVAMVRPS 149 (782)
Q Consensus 75 ~~~~~--~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~P-nt~~l~k~L~E~Ll~~--~~~~~~~~ivRps 149 (782)
..++. ..++|+. | ..| |.|..+|..+|+++.. ...+.+.+++|+.
T Consensus 136 vyg~~~~~~~~E~~--------------------------~----~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~ 185 (347)
T d1t2aa_ 136 LYGKVQEIPQKETT--------------------------P----FYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILF 185 (347)
T ss_dssp GTCSCSSSSBCTTS--------------------------C----CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred eecCCCCCCCCCCC--------------------------C----CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 64321 1122210 0 012 2499999999998864 2335778888877
Q ss_pred cccc
Q psy16243 150 IDLG 153 (782)
Q Consensus 150 ~~~~ 153 (782)
.+.+
T Consensus 186 ~vyG 189 (347)
T d1t2aa_ 186 NHES 189 (347)
T ss_dssp CEEC
T ss_pred ceeC
Confidence 6654
|
| >d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Thermotoga maritima [TaxId: 2336]
Probab=86.49 E-value=0.21 Score=39.54 Aligned_cols=56 Identities=14% Similarity=0.160 Sum_probs=48.1
Q ss_pred CCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHH
Q psy16243 78 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDM 133 (782)
Q Consensus 78 ~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~L 133 (782)
.+...+..|++.|+||...++++..+.+...-.+++..++.+||.+.+..++.+++
T Consensus 26 ~~i~~~~~~~dlG~DSl~~v~l~~~ie~~f~i~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (85)
T d1vkua_ 26 ETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKL 81 (85)
T ss_dssp CSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHH
T ss_pred HHCCCCCCHHHhcCcchHHHHHHHHHHHHccCCCCHHHHHHcCCHHHHHHHHHHHH
Confidence 34566888999999999999999999998877788888899999999888877765
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=85.66 E-value=0.79 Score=45.92 Aligned_cols=58 Identities=7% Similarity=-0.190 Sum_probs=36.7
Q ss_pred ceeeecCcCccCCCCCCccccCceeEEEeccccc---------------cccccccccC-CCCCCeEEEEecccccC
Q psy16243 17 IFEGEGLSGILSLGLNLNQKSGPISASKNSTASL---------------NSCLPGERLD-HYTTESFVHVSTAYSNC 77 (782)
Q Consensus 17 ~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~---------------~~~~~~~~~~-~~~l~~f~hvsta~~~~ 77 (782)
...+.||+..++... +....+++|+|+|+.. ++.-+.+... .++.++|+|+||..+..
T Consensus 64 ~~~~~~Dl~~~~~~~---~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~ 137 (342)
T d1y1pa1 64 ETAVVEDMLKQGAYD---EVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSAL 137 (342)
T ss_dssp EEEECSCTTSTTTTT---TTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTC
T ss_pred cEEEeccccchhhhh---hhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeec
Confidence 345789998776533 3445689999999971 1112222222 34689999999976533
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.54 E-value=0.16 Score=47.36 Aligned_cols=60 Identities=7% Similarity=-0.122 Sum_probs=40.9
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEeccccc-----------cccccccccCCCCCCeEEEEecccccC
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTASL-----------NSCLPGERLDHYTTESFVHVSTAYSNC 77 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~-----------~~~~~~~~~~~~~l~~f~hvsta~~~~ 77 (782)
..++++.||+..++. + +.....+++||||++.. ++..+.+.++..+.++|+|+||+....
T Consensus 46 ~~~~~~~gD~~d~~~-l--~~al~~~d~vi~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~ 116 (205)
T d1hdoa_ 46 RPAHVVVGDVLQAAD-V--DKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116 (205)
T ss_dssp CCSEEEESCTTSHHH-H--HHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS
T ss_pred cccccccccccchhh-H--HHHhcCCCEEEEEeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccC
Confidence 457899999988754 2 13344689999999861 122333444445689999999988744
|
| >d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Frenolicin polyketide synthase acyl carrier protein, Fren ACP species: Streptomyces roseofulvus [TaxId: 33902]
Probab=84.52 E-value=0.063 Score=42.64 Aligned_cols=48 Identities=13% Similarity=0.122 Sum_probs=41.0
Q ss_pred CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHH
Q psy16243 81 IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQ 128 (782)
Q Consensus 81 ~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~ 128 (782)
..|..|++.|+||+.+++++..+.+...-.+.+..++.+|+...+..+
T Consensus 27 d~d~~f~dlG~DSl~~~el~~~le~~~g~~l~~~~~~~~~Ti~~l~~~ 74 (82)
T d1or5a_ 27 ELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDE 74 (82)
T ss_dssp CSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHH
T ss_pred CcCcCHHHcCCChHhHHHHHHHHHHHHhCcCCHHHHHcCCCHHHHHHH
Confidence 346778999999999999999999998878888899999999765543
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.43 E-value=0.37 Score=47.90 Aligned_cols=32 Identities=31% Similarity=0.359 Sum_probs=25.1
Q ss_pred cchhhHHHHHHHHHh--cCCCCeEEEeCCCcccc
Q psy16243 122 TYALTKQVAEDMVRR--GGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 122 t~~l~k~L~E~Ll~~--~~~~~~~~ivRps~~~~ 153 (782)
.|..+|..+|.++.. ...+.+++++|+..+.+
T Consensus 143 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG 176 (312)
T d2b69a1 143 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFG 176 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEEC
Confidence 488999999999875 22357789999888765
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=82.70 E-value=0.041 Score=56.71 Aligned_cols=117 Identities=17% Similarity=0.089 Sum_probs=63.6
Q ss_pred cceeeecCcCccCCCCCCccccCceeEEEecccccc------------------ccccccccC---------CCCCCeEE
Q psy16243 16 EIFEGEGLSGILSLGLNLNQKSGPISASKNSTASLN------------------SCLPGERLD---------HYTTESFV 68 (782)
Q Consensus 16 ~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~~~------------------~~~~~~~~~---------~~~l~~f~ 68 (782)
+++.+.|||..++. +..--+...+++||||||..+ +.-+.+.+. ..+.++|+
T Consensus 51 ~~~~~~~Dl~d~~~-l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i 129 (361)
T d1kewa_ 51 RYNFEHADICDSAE-ITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFH 129 (361)
T ss_dssp TEEEEECCTTCHHH-HHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEE
T ss_pred CcEEEEccCCCHHH-HHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEE
Confidence 55667788876643 111011113789999999511 111111111 11346899
Q ss_pred EEecccccCCCCCc--ceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCC-ccchhhHHHHHHHHHh--cCCCCeE
Q psy16243 69 HVSTAYSNCRQPII--EERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWP-NTYALTKQVAEDMVRR--GGAGMPV 143 (782)
Q Consensus 69 hvsta~~~~~~~~i--de~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~P-nt~~l~k~L~E~Ll~~--~~~~~~~ 143 (782)
|+||....+..... +|+-...+.+.+. --..| +.|..+|...|.++.. ...+.++
T Consensus 130 ~~SS~~vyg~~~~~~~~~~~~~~~~~~e~--------------------~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~ 189 (361)
T d1kewa_ 130 HISTDEVYGDLPHPDEVENSVTLPLFTET--------------------TAYAPSSPYSASKASSDHLVRAWRRTYGLPT 189 (361)
T ss_dssp EEEEGGGGCCCCCGGGSCTTSCCCCBCTT--------------------SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred EeccceeeCCCccCCccccccCCCCcccC--------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 99999887754321 1111111111000 00123 3499999999999875 2235778
Q ss_pred EEeCCCcccc
Q psy16243 144 AMVRPSIDLG 153 (782)
Q Consensus 144 ~ivRps~~~~ 153 (782)
+++|+..+.+
T Consensus 190 ~~lR~~~vyG 199 (361)
T d1kewa_ 190 IVTNCSNNYG 199 (361)
T ss_dssp EEEEECEEES
T ss_pred EEEecCceEC
Confidence 8999887654
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=81.66 E-value=0.12 Score=52.82 Aligned_cols=112 Identities=14% Similarity=-0.019 Sum_probs=63.9
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccc-------------------ccccccccccCCCCCCeEEEEecccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS-------------------LNSCLPGERLDHYTTESFVHVSTAYS 75 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~-------------------~~~~~~~~~~~~~~l~~f~hvsta~~ 75 (782)
.......||+...+..+ .....+++|||+|+. .++..+.+.....+.++|+|+||+..
T Consensus 58 ~~~~~~~~D~~~~~~~~---~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~ 134 (363)
T d2c5aa1 58 FCDEFHLVDLRVMENCL---KVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACI 134 (363)
T ss_dssp TCSEEEECCTTSHHHHH---HHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGG
T ss_pred ccCcEEEeechhHHHHH---HHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhhCcccccccccccc
Confidence 33455666665554322 122358899999975 12222233333456799999999988
Q ss_pred cCCCCC--c-ceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCC-ccchhhHHHHHHHHHh--cCCCCeEEEeCCC
Q psy16243 76 NCRQPI--I-EERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWP-NTYALTKQVAEDMVRR--GGAGMPVAMVRPS 149 (782)
Q Consensus 76 ~~~~~~--i-de~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~P-nt~~l~k~L~E~Ll~~--~~~~~~~~ivRps 149 (782)
.+.... . ++.......+ -..| +.|..+|..+|.++.. ...+.+++++|+.
T Consensus 135 ~~~~~~~~~~~~~~~~~e~~------------------------~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~ 190 (363)
T d2c5aa1 135 YPEFKQLETTNVSLKESDAW------------------------PAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFH 190 (363)
T ss_dssp SCGGGSSSSSSCEECGGGGS------------------------SBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred ccccccccccccccccccCC------------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEee
Confidence 764221 1 1111110000 0011 3488999999998875 2235788999988
Q ss_pred cccc
Q psy16243 150 IDLG 153 (782)
Q Consensus 150 ~~~~ 153 (782)
.+.+
T Consensus 191 ~vyG 194 (363)
T d2c5aa1 191 NIYG 194 (363)
T ss_dssp CEEC
T ss_pred eEec
Confidence 8765
|
| >d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Hypothetical protein Atu2571 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=81.52 E-value=0.27 Score=38.74 Aligned_cols=56 Identities=9% Similarity=0.098 Sum_probs=44.0
Q ss_pred CCCCcceeccCCCCChhhHHHHHHhcchhhhhhhccCccc--cCCccchhhHHHHHHH
Q psy16243 78 RQPIIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVD--YWPNTYALTKQVAEDM 133 (782)
Q Consensus 78 ~~~~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~--~~Pnt~~l~k~L~E~L 133 (782)
.+...+.+||+.|+||+.++++...+.+...-.+++..+. .+|+...+++++.+.+
T Consensus 20 ~~i~~~~~f~dlG~DSl~~~~l~~~le~~f~v~i~~~~l~~~~~~Ti~~la~~i~~~~ 77 (83)
T d2jq4a1 20 DTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKLIL 77 (83)
T ss_dssp GGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHHHHH
T ss_pred HHcCCCCCHHHHhCccHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3456789999999999999999999998876555555544 5799999987776544
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=81.03 E-value=0.37 Score=47.70 Aligned_cols=88 Identities=11% Similarity=0.069 Sum_probs=54.0
Q ss_pred eeEEEecccc-------------------ccccccccccCCCCCCeEEEEecccccCCCC--Ccceecc-CCCCChhhHH
Q psy16243 40 ISASKNSTAS-------------------LNSCLPGERLDHYTTESFVHVSTAYSNCRQP--IIEERFY-EPPVNPNHLI 97 (782)
Q Consensus 40 v~~~i~~~~~-------------------~~~~~~~~~~~~~~l~~f~hvsta~~~~~~~--~ide~~y-~~g~Ds~~~~ 97 (782)
++.|+|+|+. .++.-+.+.+...+.++|||+||..+.++.. .++|+-. +...+
T Consensus 55 ~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~----- 129 (315)
T d1e6ua_ 55 IDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLE----- 129 (315)
T ss_dssp CSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCC-----
T ss_pred CCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCC-----
Confidence 5789999864 1222222233334678999999988866432 1233221 11111
Q ss_pred HHHHhcchhhhhhhccCccccCC-ccchhhHHHHHHHHHh--cCCCCeEEEeCCCcccc
Q psy16243 98 QITELLNDDMIDKITPGIVDYWP-NTYALTKQVAEDMVRR--GGAGMPVAMVRPSIDLG 153 (782)
Q Consensus 98 ~l~~~L~~~~~~~~~p~li~~~P-nt~~l~k~L~E~Ll~~--~~~~~~~~ivRps~~~~ 153 (782)
.| +.|..+|...|+++.. ...+.+++++||..+.+
T Consensus 130 ---------------------~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG 167 (315)
T d1e6ua_ 130 ---------------------PTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYG 167 (315)
T ss_dssp ---------------------GGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEES
T ss_pred ---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEEC
Confidence 11 1399999999999875 22367899999988765
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=80.39 E-value=0.23 Score=50.09 Aligned_cols=107 Identities=15% Similarity=-0.052 Sum_probs=65.9
Q ss_pred ccceeeecCcCccCCCCCCccccCceeEEEecccc------------------ccccccccccCCCCCCeEEEEeccccc
Q psy16243 15 EEIFEGEGLSGILSLGLNLNQKSGPISASKNSTAS------------------LNSCLPGERLDHYTTESFVHVSTAYSN 76 (782)
Q Consensus 15 ~~~~~~~gd~~~~~~~~~~~~~~~~v~~~i~~~~~------------------~~~~~~~~~~~~~~l~~f~hvsta~~~ 76 (782)
....++.||+....... ......++|+|+|+. .++..+.+.....+.++|+|.||+.+.
T Consensus 70 ~~~~~~~~d~~d~~~~~---~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vy 146 (341)
T d1sb8a_ 70 SNFKFIQGDIRNLDDCN---NACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTY 146 (341)
T ss_dssp TTEEEEECCTTSHHHHH---HHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGG
T ss_pred CCeeEEeeccccccccc---cccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceee
Confidence 45677889986654311 233347788998874 233334444443357899999999987
Q ss_pred CCCC--CcceeccCCCCChhhHHHHHHhcchhhhhhhccCccccCCccchhhHHHHHHHHHh--cCCCCeEEEeCCCccc
Q psy16243 77 CRQP--IIEERFYEPPVNPNHLIQITELLNDDMIDKITPGIVDYWPNTYALTKQVAEDMVRR--GGAGMPVAMVRPSIDL 152 (782)
Q Consensus 77 ~~~~--~ide~~y~~g~Ds~~~~~l~~~L~~~~~~~~~p~li~~~Pnt~~l~k~L~E~Ll~~--~~~~~~~~ivRps~~~ 152 (782)
+... .++|+--.. -.+.|..+|...|.++.. ...+.+++++||..+.
T Consensus 147 g~~~~~~~~E~~~~~-----------------------------p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~ 197 (341)
T d1sb8a_ 147 GDHPGLPKVEDTIGK-----------------------------PLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVF 197 (341)
T ss_dssp TTCCCSSBCTTCCCC-----------------------------CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEE
T ss_pred CCCCCCCccCCCCCC-----------------------------CCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceee
Confidence 6432 123321111 123488999999988764 2234677899988665
Q ss_pred c
Q psy16243 153 G 153 (782)
Q Consensus 153 ~ 153 (782)
+
T Consensus 198 G 198 (341)
T d1sb8a_ 198 G 198 (341)
T ss_dssp C
T ss_pred c
Confidence 4
|